RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST3GAL6 (Homo sapiens)

Ensembl gene IDs: ENSG00000064225

Ensembl transcript IDs: ENST00000265261.10, ENST00000394162.5, ENST00000460774.5, ENST00000462152.5, ENST00000465004.1, ENST00000466482.5, ENST00000468553.5, ENST00000469105.5, ENST00000474595.1, ENST00000476833.5, ENST00000477574.5, ENST00000480133.1, ENST00000483910.5, ENST00000485391.5, ENST00000486249.5, ENST00000486334.6, ENST00000489112.5, ENST00000490684.1, ENST00000491912.1, ENST00000492254.5, ENST00000493953.1, ENST00000495376.5, ENST00000495502.1, ENST00000497008.5, ENST00000497621.5, ENST00000613264.4

Found 531 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGGTTGGTAAGGACTTGGGGGCGGGGAGGGCTGTCCAGCAGATaGTCCTTCAGTGTGTGCCTGAAACCTCGCCTTGTGGACACATCT +
Preference number: 1 (lower is better)
Translates to: HRLVRTWGRGGLSSR*SFSVCLKPRLVDTS
Trigger: AGATGTGTCCACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCATCTGCTGGACAGCCCTCCCCGCCCCCAAGTCCTTACCAACCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495376.5
3UTR GCA 90 bp ACTTGGGGGCGGGGAGGGCTGTCCAGCAGATGCTCCTTCAGTGTGTaGCTGAAACCTCGCCTTGTGGACACATCTCATGTCACAGTAGGT +
Preference number: 1 (lower is better)
Translates to: TWGRGGLSSRCSFSV*LKPRLVDTSHVTVG
Trigger: ACCTACTGTGACATGAGATGTGTCCACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCATCTGCTGGACAGCCCTCCCCGCCCCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495376.5
3UTR GCA 90 bp CCCTCTGTTCGCAAAGGTGGAGAATTTGCGAAAGAGGGACCAGGCTaGCAAAGACTCAGGACGCTGCCTGCTGAATTGCTGGGGCCTCTC +
Preference number: 1 (lower is better)
Translates to: PSVRKGGEFAKEGPG*QRLRTLPAELLGPL
Trigger: GAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR GCA 90 bp AGAATCTGTGTCCTAAAGACCCTCTGTTCGCAAAGGTGGAGAATTTaGGAAAGAGGGACCAGGCTGCCAAAGACTCAGGACGCTGCCTGC +
Preference number: 1 (lower is better)
Translates to: RICVLKTLCSQRWRI*ERGTRLPKTQDAAC
Trigger: GCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAGGGTCTTTAGGACACAGATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR CCA 90 bp GCACTTTTAAGAATCTGTGTCCTAAAGACCCTCTGTTCGCAAAGGTaGAGAATTTGCGAAAGAGGGACCAGGCTGCCAAAGACTCAGGAC +
Preference number: 1 (lower is better)
Translates to: ALLRICVLKTLCSQR*RICERGTRLPKTQD
Trigger: GTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAGGGTCTTTAGGACACAGATTCTTAAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR TCA 90 bp TTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTTTACAGTAGCCAAATATCCTCCTCA +
Preference number: 1 (lower is better)
Translates to: FQSQVVSACHIKPQS*FSTSHVYSSQISSS
Trigger: TGAGGAGGATATTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR TCA 90 bp CCCACAGCACCATTCTTTTTGAAGCCTGATTTACTTTATATCAATTaGACTTCAGCAGCCACACTGCAGCCTATGGCTGTGTGGTATGAG +
Preference number: 1 (lower is better)
Translates to: PTAPFFLKPDLLYIN*TSAATLQPMAVWYE
Trigger: CTCATACCACACAGCCATAGGCTGCAGTGTGGCTGCTGAAGTTCAATTGATATAAAGTAAATCAGGCTTCAAAAAGAATGGTGCTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR TCA 90 bp ATCTTTATGTCCTTGTGTACCCACAGCACCATTCTTTTTGAAGCCTaGTTTACTTTATATCAATTGAACTTCAGCAGCCACACTGCAGCC +
Preference number: 1 (lower is better)
Translates to: IFMSLCTHSTILFEA*FTLYQLNFSSHTAA
Trigger: GGCTGCAGTGTGGCTGCTGAAGTTCAATTGATATAAAGTAAATCAGGCTTCAAAAAGAATGGTGCTGTGGGTACACAAGGACATAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR TCA 90 bp CGTTCCCATCTTTATGTCCTTGTGTACCCACAGCACCATTCTTTTTaGAGCCTGATTTACTTTATATCAATTGAACTTCAGCAGCCACAC +
Preference number: 1 (lower is better)
Translates to: RSHLYVLVYPQHHSF*SLIYFISIELQQPH
Trigger: GTGTGGCTGCTGAAGTTCAATTGATATAAAGTAAATCAGGCTTCAAAAAGAATGGTGCTGTGGGTACACAAGGACATAAAGATGGGAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR CCA 90 bp TACACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATaGTTTTCCAGTGTTTCCCAATTGTATTTATTGGTCAAAAGAGAG +
Preference number: 1 (lower is better)
Translates to: YTLFREAGWLSVIKP*FSSVSQLYLLVKRE
Trigger: CTCTCTTTTGACCAATAAATACAATTGGGAAACACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR CCA 90 bp TCTAATGTATTTCACCCTTTATACACCCTCTTTAGAGAGGCAGGTTaGTTGTCAGTAATCAAGCCATGGTTTTCCAGTGTTTCCCAATTG +
Preference number: 1 (lower is better)
Translates to: SNVFHPLYTLFREAG*LSVIKPWFSSVSQL
Trigger: CAATTGGGAAACACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR CCA 90 bp AAACTGTGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTaGGTTAGATCAACTACTACTGTTCTCCCCTTTATTCTGCTTTAT +
Preference number: 1 (lower is better)
Translates to: KLWDSANICWYSCLI*VRSTTTVLPFILLY
Trigger: ATAAAGCAGAATAAAGGGGAGAACAGTAGTAGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCACAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR TCA 90 bp CTGTTCTCCCCTTTATTCTGCTTTATAAGTACCGCATTCTGTTTCTaGGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGA +
Preference number: 1 (lower is better)
Translates to: LFSPLFCFISTAFCF*AKSNVFHPLYTLFR
Trigger: TCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATGCGGTACTTATAAAGCAGAATAAAGGGGAGAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTGGATCAGATTCTCTaGTGCACCCTAGGTAGCCAG +
Preference number: 2 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLLDQIL*CTLGSQ
Trigger: CTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAA...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR CAA 90 bp AAGAATCTGTGTCCTAAAGACCCTCTGTTCGCAAAGGTGGAGAATTaGCGAAAGAGGGACCAGGCTGCCAAAGACTCAGGACGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: KNLCPKDPLFAKVEN*RKRDQAAKDSGRCL
Trigger: CAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAGGGTCTTTAGGACACAGATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR GCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCAGATCAGATTCTCTGGTaGACCCTAGGTAGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPDQILW*TLGSQA
Trigger: TGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATC...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR GCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGCAAAAAGAGCTGCTCTaGAGTCACATTGTGATACGC +
Preference number: 2 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLQKELL*SHIVIR
Trigger: GCGTATCACAATGTGACTGCAGAGCAGCTCTTTTTG...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
3UTR-3UTR TCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp GACTGGCTTGCATTGGATCAGATTCTCTGGTGCACCCTAGGTAGCCAGGCAAGCATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: DWLALDQILWCTLGSQASIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...GCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGAGCTCATACCTCTTCTaGCAACTTTTAGTTCCATCC +
Preference number: 2 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLSSYLF*QLLVPS
Trigger: GGATGGAACTAAAAGTTGTCAGAAGAGGTATGAGCT...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 2 (lower is better)
Translates to: AKWFRLATSSHNRDFPPAISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCAATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 2 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR CAA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATaGGATCAGATTCTCTGGTGCACCCTAGGTAGCCAGGCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: EGRLAHHICRIDWLA*DQILWCTLGSQASF
Trigger: AAAGCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp GACTGGCTTGCATTGGATCAGATTCTCTGGTGCACCCTAGGTAGCCAGGCAAGCAGGGGAAAATCACACTaGTTGATTACATGTGATTCC +
Preference number: 2 (lower is better)
Translates to: DWLALDQILWCTLGSQASRGKSH*LITCDS
Trigger: GGAATCACATGTAATCAATCAGTGTGATTTTCCCCT...GCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp CTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: LATSSHNRDFPPAMFTVALSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...GGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGGTTAGCATCATCTTCTaGGTCTGTAGAGTCAATCTT +
Preference number: 2 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQVSIIF*VCRVNL
Trigger: AAGATTGACTCTACAGACTCAGAAGATGATGCTAAC...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
3UTR-3UTR GCA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTCTCAAGCAATTCTCGTaGCTCAGCCTCCCGAGTACC +
Preference number: 2 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFILKQFS*LSLPST
Trigger: GGTACTCGGGAGGCTGAGGCACGAGAATTGCTTGAG...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 2 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
3UTR-3UTR GCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTCTTCAGCAGCCACACTaGAGCCTATGGCTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: WDSANICWYSCLIWVRSTLQQPH*SLWLCG
Trigger: ACCACACAGCCATAGGCTGCAGTGTGGCTGCTGAAG...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTCCACACTGCAGCCTATaGCTGTGTGGTATGAGGGGA +
Preference number: 2 (lower is better)
Translates to: WDSANICWYSCLIWVRSTPHCSL*LCGMRG
Trigger: TCCCCTCATACCACACAGCCATAGGCTGCAGTGTGG...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: EGRLAHHICRIDWLALDQIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCAATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGAIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: LAHHICRIDWLALDQILWIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCAGGGTGTTTAGGTTTCTaGTTTTTGGGAAACACTTTT +
Preference number: 2 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPGCLGF*FLGNTF
Trigger: AAAAGTGTTTCCCAAAAATCAGAAACCTAAACACCC...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
3UTR-3UTR GCA 90 bp GGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTTTCTAAAATCAGCCAAAGAGGGACCAGGCTaGCAAAGACTCAGGACGCTG +
Preference number: 2 (lower is better)
Translates to: GKSNLSLPYKEAIFLKSAKEGPG*QRLRTL
Trigger: CAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTT...GGCTGATTTTAGAAAGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR CCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCAATTTGTAGGATTGACTaGCTTGCATTGGATCAGATT +
Preference number: 2 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPICRID*LALDQI
Trigger: AATCTGATCCAATGCAAGCCAGTCAATCCTACAAAT...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCAAGCTCATACCTCTTCTaGCAACTTTTAGTTCCATCC +
Preference number: 2 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGASSYLF*QLLVPS
Trigger: GGATGGAACTAAAAGTTGTCAGAAGAGGTATGAGCT...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGAGCTCATACCTCTTCTaGCAACTTTTAGTTCCATCC +
Preference number: 2 (lower is better)
Translates to: LAHHICRIDWLALDQILWSSYLF*QLLVPS
Trigger: GGATGGAACTAAAAGTTGTCAGAAGAGGTATGAGCT...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR GCA 90 bp GTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGAGAGGGATCAGATTCTCTGGTaGACCCTAGGTAGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: VSEPNLMYFTLYTPSLERDQILW*TLGSQA
Trigger: TGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATC...CCTCTCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR GCA 90 bp GAGCTGCTCTGCAGTCACATTGTGATACGCGTTCTTATTCATCAAAGACATGGTCAAAAAGAGCTGCTCTaGAGTCACATTGTGATACGC +
Preference number: 2 (lower is better)
Translates to: ELLCSHIVIRVLIHQRHGQKELL*SHIVIR
Trigger: GCGTATCACAATGTGACTGCAGAGCAGCTCTTTTTG...ACCATGTCTTTGATGAATAAGAACGCGTATCACAATGTGACTGCAGAGCAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
3UTR-3UTR CCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCAGAGGAATCAAAACTGTaGGACTCTGCAAACATATGC +
Preference number: 2 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGAEESKL*DSANIC
Trigger: GCATATGTTTGCAGAGTCCCACAGTTTTGATTCCTC...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGGAGGAATCAAAACTGTaGGACTCTGCAAACATATGC +
Preference number: 2 (lower is better)
Translates to: LAHHICRIDWLALDQILWEESKL*DSANIC
Trigger: GCATATGTTTGCAGAGTCCCACAGTTTTGATTCCTC...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGTCATCAAAGACATGGTaGCATTCCCATAGTAGTGCA +
Preference number: 2 (lower is better)
Translates to: EGRLAHHICRIDWLALDQSSKTW*HSHSSA
Trigger: TGCACTACTATGGGAATGCCACCATGTCTTTGATGA...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
3UTR-3UTR CCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACTTTGATAAACAAGGCTaGATCTTATTTCTCCGTTTC +
Preference number: 2 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHFDKQG*ILFLRF
Trigger: GAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAA...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR CAA 90 bp TTAAACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTA +
Preference number: 2 (lower is better)
Translates to: LNQYELRFPEPSGFG*PHQATIVIFHQPCL
Trigger: TAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR CAA 90 bp AAGGGTGAAACTGATGAAACCTCAGCAGAGAGGCAAAAGCTGGCTTaGATAAACAAGGCTGGATCTTATTTCTCCGTTTCATTTCCACAG +
Preference number: 2 (lower is better)
Translates to: KGETDETSAERQKLA*INKAGSYFSVSFPQ
Trigger: CTGTGGAAATGAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAAGCCAGCTTTTGCCTCTCTGCTGAGGTTTCATCAGTTTCACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR TCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCAGGCAAGCTTTCCATCTaGAGATTAGCTTTAATCATG +
Preference number: 2 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGAGKLSI*RLALIM
Trigger: CATGATTAAAGCTAATCTTCAGATGGAAAGCTTGCC...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTTTGACTGGCTTGCATTaGATCAGATTCTCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFILTGLH*IRFSGA
Trigger: TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAA...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp AAAAGAGCTGCTCTGCAGTCACATTGTGATACGCGTTCTTATTCATCAAAGACACTCTGTTCGCAAAGGTaGAGAATTTGCGAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: KRAALQSHCDTRSYSSKTLCSQR*RICERG
Trigger: CCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAG...TGTCTTTGATGAATAAGAACGCGTATCACAATGTGACTGCAGAGCAGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR CAA 90 bp ATTCTAAGGGTACATGTGCAGAGTGCAGGTTGTTACATGGGTATATaGTGTGATACTGAGGTTTGTGGTATGAATGATCCCATCATCCAG +
Preference number: 2 (lower is better)
Translates to: ILRVHVQSAGCYMGI*CDTEVCGMNDPIIQ
Trigger: CTGGATGATGGGATCATTCATACCACAAACCTCAGTATCACACAATATACCCATGTAACAACCTGCACTCTGCACATGTACCCTTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGACCGCATTCTGTTTCTaGGCCAAATCTAATGTATTT +
Preference number: 2 (lower is better)
Translates to: LAHHICRIDWLALDQILWTAFCF*AKSNVF
Trigger: AAATACATTAGATTTGGCTCAGAAACAGAATGCGGT...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR GCA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGCAAGTGGTTTCGGCTTaGCACATCAAGCCACAATCG +
Preference number: 2 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQQVVSA*HIKPQS
Trigger: CGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTG...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp GTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGAGAGGATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 2 (lower is better)
Translates to: VSEPNLMYFTLYTPSLERISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...CCTCTCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTATTTGTAGGATTGACTaGCTTGCATTGGATCAGATT +
Preference number: 2 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSICRID*LALDQI
Trigger: AATCTGATCCAATGCAAGCCAGTCAATCCTACAAAT...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTCTGATTGATTACATGTaGTTCCAGTTCTGGTACCTT +
Preference number: 2 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFILIDYM*FQFWYL
Trigger: AAGGTACCAGAACTGGAATCACATGTAATCAATCAG...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR TCA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTAGTGCAAAGGACTCTTaGGGTCAGAAAAGTTGTATT +
Preference number: 2 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFISAKDS*GQKSCI
Trigger: AATACAACTTTTCTGACCTCAAGAGTCCTTTGCACT...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
3UTR-3UTR GCA 90 bp AACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 2 (lower is better)
Translates to: NQYELRFPEPSGFGLPHQKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...TTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
3UTR-3UTR GCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTCAAAGGTGGAGAATTTaGGAAAGAGGGACCAGGCTG +
Preference number: 2 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVQRWRI*ERGTRL
Trigger: CAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTG...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR CCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 2 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 2 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp TTTATTTTGTCACCCATCAACAATTCCAACAGCCACCTTAAATCATGTGGCTTAATACCCTCTCATGGCTaGCTCACCTGCACTTTTAAG +
Preference number: 2 (lower is better)
Translates to: FILSPINNSNSHLKSCGLIPSHG*LTCTFK
Trigger: CTTAAAAGTGCAGGTGAGCCAGCCATGAGAGGGTAT...TAAGCCACATGATTTAAGGTGGCTGTTGGAATTGTTGATGGGTGACAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR TCA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR GCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCAAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 2 (lower is better)
Translates to: LCSFERASRKYSADVLIPKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
3UTR-3UTR TCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGACCGCATTCTGTTTCTaGGCCAAATCTAATGTATTT +
Preference number: 2 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRTAFCF*AKSNVF
Trigger: AAATACATTAGATTTGGCTCAGAAACAGAATGCGGT...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR GCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGTTCTCCCCTTTATTCTaGTTTATAAGTACCGCATTC +
Preference number: 2 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRFSPLF*FISTAF
Trigger: GAATGCGGTACTTATAAAGCAGAATAAAGGGGAGAA...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGATTTGTAGGATTGACTaGCTTGCATTGGATCAGATT +
Preference number: 2 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRICRID*LALDQI
Trigger: AATCTGATCCAATGCAAGCCAGTCAATCCTACAAAT...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGTATTCATCAAAGACATaGTGGCATTCCCATAGTAGT +
Preference number: 2 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRYSSKT*WHSHSS
Trigger: ACTACTATGGGAATGCCACCATGTCTTTGATGAATA...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486249.5
3UTR-3UTR TCA 90 bp ATTCTTCAAAACTCCTCCATTACCAACCACCACACACTTTTTACAGGGTATGTTACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 2 (lower is better)
Translates to: ILQNSSITNHHTLFTGYVTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...AACATACCCTGTAAAAAGTGTGTGGTGGTTGGTAATGGAGGAGTTTTGAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000497621.5
3UTR-3UTR GCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 2 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486249.5
3UTR-3UTR GCA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGTCGTTCCCCATAATATaGAATGCAGTACATAATAGA +
Preference number: 2 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQSFPII*NAVHNR
Trigger: TCTATTATGTACTGCATTGCATATTATGGGGAACGA...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR GCA 72 bp GTAAGGACTTGGGGGCGGGGAGGGCTGTCCAGCAGATaGTCCTTCAGTGTGTGCCTGAAACCTCGCCTTGTG +
Preference number: 3 (lower is better)
Translates to: VRTWGRGGLSSR*SFSVCLKPRLV
Trigger: CACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCATCTGCTGGACAGCCCTCCCCGCCCCCAAGTCCTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495376.5
3UTR GCA 72 bp CGCAAAGGTGGAGAATTTGCGAAAGAGGGACCAGGCTaGCAAAGACTCAGGACGCTGCCTGCTGAATTGCTG +
Preference number: 3 (lower is better)
Translates to: RKGGEFAKEGPG*QRLRTLPAELL
Trigger: CAGCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR CAA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 3 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGATTGACTGGCTTGCATaGGATCAGATTCTCTGGTGC +
Preference number: 3 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLIDWLA*DQILWC
Trigger: GCACCAGAGAATCTGATCCAATGCAAGCCAGTCAAT...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR GCA 72 bp GTCCTAAAGACCCTCTGTTCGCAAAGGTGGAGAATTTaGGAAAGAGGGACCAGGCTGCCAAAGACTCAGGAC +
Preference number: 3 (lower is better)
Translates to: VLKTLCSQRWRI*ERGTRLPKTQD
Trigger: GTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAGGGTCTTTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR CAA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTTTCCTTCTTGAGCTaGCCTAGCTTAGCTTCACTG +
Preference number: 3 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLFSFLS*PSLASL
Trigger: CAGTGAAGCTAAGCTAGGCAAGCTCAAGAAGGAAAA...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTATAGTCTTTCAGCCCTaGCCCTCCCCGCTCCCCTCG +
Preference number: 3 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFIIVFQP*PSPLPS
Trigger: CGAGGGGAGCGGGGAGGGCAAGGGCTGAAAGACTAT...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCTTTTCCTTCTTGAGCTaGCCTAGCTTAGCTTCACTG +
Preference number: 3 (lower is better)
Translates to: AKWFRLATSSHNRDFPPAFSFLS*PSLASL
Trigger: CAGTGAAGCTAAGCTAGGCAAGCTCAAGAAGGAAAA...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR GCA 72 bp AGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTaGACCCTAGGTAGCCAGGCAAGCTTTCCATCTGAA +
Preference number: 3 (lower is better)
Translates to: RIDWLALDQILW*TLGSQASFPSE
Trigger: TTCAGATGGAAAGCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR CCA 72 bp AGAATCTGTGTCCTAAAGACCCTCTGTTCGCAAAGGTaGAGAATTTGCGAAAGAGGGACCAGGCTGCCAAAG +
Preference number: 3 (lower is better)
Translates to: RICVLKTLCSQR*RICERGTRLPK
Trigger: CTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAGGGTCTTTAGGACACAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR CCA 72 bp GCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCTGGCTCACCTG +
Preference number: 3 (lower is better)
Translates to: AVHNRGRQHSGI*PQDTLSWLAHL
Trigger: CAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR CAA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 3 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCAGTAGGATTGACTGGCTaGCATTGGATCAGATTCTCT +
Preference number: 3 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPVGLTG*HWIRFS
Trigger: AGAGAATCTGATCCAATGCAAGCCAGTCAATCCTAC...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTCTGCCCGGCCTCAGCTaGACTTTTCTTAAGTGTTTA +
Preference number: 3 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSLPGLS*TFLKCL
Trigger: TAAACACTTAAGAAAAGTCAAGCTGAGGCCGGGCAG...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp AGATGCTCCTTCAGTGTGTGCCTGAAACCTCGCCTTGTGGACACATCTCATGTCCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 3 (lower is better)
Translates to: RCSFSVCLKPRLVDTSHVHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...GACATGAGATGTGTCCACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495376.5
3UTR-3UTR CAA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 3 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPSVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
3UTR CCA 72 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTaGCTTGCATTGGATCAGATTCTCTGGTGCACCCTA +
Preference number: 3 (lower is better)
Translates to: EGRLAHHICRID*LALDQILWCTL
Trigger: TAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR TCA 72 bp CAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTTTACAGTAGCCAAATA +
Preference number: 3 (lower is better)
Translates to: QVVSACHIKPQS*FSTSHVYSSQI
Trigger: TATTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTCTGCCCGGCCTCAGCTaGACTTTTCTTAAGTGTTTA +
Preference number: 3 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFILPGLS*TFLKCL
Trigger: TAAACACTTAAGAAAAGTCAAGCTGAGGCCGGGCAG...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp CGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTAGGCAAAAGCTGGCTTaGATAAACAAGGCTGGATCT +
Preference number: 3 (lower is better)
Translates to: RVLIHQRHGGIPIVVQRTRQKLA*INKAGS
Trigger: AGATCCAGCCTTGTTTATCAAAGCCAGCTTTTGCCT...AGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR GCA 72 bp CAGGTGCCACCCAATAGACATTCGTTCCCCATAATATaGAATGCAGTACATAATAGAGGAAGACAGCACTCA +
Preference number: 3 (lower is better)
Translates to: QVPPNRHSFPII*NAVHNRGRQHS
Trigger: TGAGTGCTGTCTTCCTCTATTATGTACTGCATTGCATATTATGGGGAACGAATGTCTATTGGGTGGCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
3UTR-3UTR CAA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTATTGACTGGCTTGCATaGGATCAGATTCTCTGGTGC +
Preference number: 3 (lower is better)
Translates to: WDSANICWYSCLIWVRSTIDWLA*DQILWC
Trigger: GCACCAGAGAATCTGATCCAATGCAAGCCAGTCAAT...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 3 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTCCATTAGTGTTTATTTaGTCACCCATCAACAATTCC +
Preference number: 3 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSPLVFI*SPINNS
Trigger: GGAATTGTTGATGGGTGACAAAATAAACACTAATGG...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486249.5
3UTR GCA 72 bp ATTTACTTTATATCAATTGAACTTCAGCAGCCACACTaGAGCCTATGGCTGTGTGGTATGAGGGGAAAATCA +
Preference number: 3 (lower is better)
Translates to: IYFISIELQQPH*SLWLCGMRGKS
Trigger: TGATTTTCCCCTCATACCACACAGCCATAGGCTGCAGTGTGGCTGCTGAAGTTCAATTGATATAAAGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp GTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGAGAGGGTAGGATTGACTGGCTaGCATTGGATCAGATTCTCT +
Preference number: 3 (lower is better)
Translates to: VSEPNLMYFTLYTPSLERVGLTG*HWIRFS
Trigger: AGAGAATCTGATCCAATGCAAGCCAGTCAATCCTAC...CCTCTCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp GAGCTGCTCTGCAGTCACATTGTGATACGCGTTCTTATTCATCAAAGACATGGTTTGAGGTCAGAAAAGTaGTATTTAAAACCAGCTAGG +
Preference number: 3 (lower is better)
Translates to: ELLCSHIVIRVLIHQRHGLRSEK*YLKPAR
Trigger: CCTAGCTGGTTTTAAATACAACTTTTCTGACCTCAA...ACCATGTCTTTGATGAATAAGAACGCGTATCACAATGTGACTGCAGAGCAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
3UTR-3UTR CAA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 3 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
3UTR-3UTR CAA 90 bp TCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTTCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 3 (lower is better)
Translates to: SHPIGQIKLIATIQGSNLHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...AAGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
3UTR TCA 72 bp TCCTTGTGTACCCACAGCACCATTCTTTTTGAAGCCTaGTTTACTTTATATCAATTGAACTTCAGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: SLCTHSTILFEA*FTLYQLNFSSH
Trigger: GTGGCTGCTGAAGTTCAATTGATATAAAGTAAATCAGGCTTCAAAAAGAATGGTGCTGTGGGTACACAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR CCA 72 bp TTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATaGTTTTCCAGTGTTTCCCAATTGTATTTATTGGTC +
Preference number: 3 (lower is better)
Translates to: FREAGWLSVIKP*FSSVSQLYLLV
Trigger: GACCAATAAATACAATTGGGAAACACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAACCACATTTGTAGGATaGACTGGCTTGCATTGGATC +
Preference number: 3 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLTTFVG*TGLHWI
Trigger: GATCCAATGCAAGCCAGTCAATCCTACAAATGTGGT...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR-3UTR CAA 90 bp AAAAGAGCTGCTCTGCAGTCACATTGTGATACGCGTTCTTATTCATCAAAGACATTGAGGTCAGAAAAGTaGTATTTAAAACCAGCTAGG +
Preference number: 3 (lower is better)
Translates to: KRAALQSHCDTRSYSSKTLRSEK*YLKPAR
Trigger: CCTAGCTGGTTTTAAATACAACTTTTCTGACCTCAA...TGTCTTTGATGAATAAGAACGCGTATCACAATGTGACTGCAGAGCAGCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
3UTR-3UTR CAA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGTCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 3 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQSVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
3UTR GCA 72 bp CAAAAAGTTATAAGAGGAATCAAAACTGTGGGACTCTaGAAACATATGCTGGTATTCATGTCTAATCTGGGT +
Preference number: 3 (lower is better)
Translates to: QKVIRGIKTVGL*KHMLVFMSNLG
Trigger: ACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCACAGTTTTGATTCCTCTTATAACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR TCA 72 bp CCTTTATTCTGCTTTATAAGTACCGCATTCTGTTTCTaGGCCAAATCTAATGTATTTCACCCTTTATACACC +
Preference number: 3 (lower is better)
Translates to: PLFCFISTAFCF*AKSNVFHPLYT
Trigger: GGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATGCGGTACTTATAAAGCAGAATAAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR TCA 72 bp AATATACAGTATTCACAGAAATTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAGACAGTATACATAATT +
Preference number: 3 (lower is better)
Translates to: NIQYSQKLSWWL*ITRQQQTVYII
Trigger: AATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGTATATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TGGCACAGGTTGGTAAGGACTTGGGGGCGGGGAGGGCTGTCCAGCAGATGCTCCTGTCCATTCAGCCCCTaGACAGGCCGTCATCCATCC +
Preference number: 4 (lower is better)
Translates to: WHRLVRTWGRGGLSSRCSCPFSP*TGRHPS
Trigger: GGATGGATGACGGCCTGTCCAGGGGCTGAATGGACA...GGAGCATCTGCTGGACAGCCCTCCCCGCCCCCAAGTCCTTACCAACCTGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR CCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCCTTCCCCGCGGATCTaGCGGGGGAGCAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHPSPRI*RGSRGG
Trigger: CCCTCCTCTGCTCCCCCGCCAGATCCGCGGGGAAGG...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394162.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCACCTTCCCCGCGGATCTaGCGGGGGAGCAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPPSPRI*RGSRGG
Trigger: CCCTCCTCTGCTCCCCCGCCAGATCCGCGGGGAAGG...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394162.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCGGCAGAAGTAAACACTaGGGCTTGTGGCGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: AKWFRLATSSHNRDFPPAGRSKH*GLWRRG
Trigger: TCCGCGGCGCCACAAGCCTCAGTGTTTACTTCTGCC...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
CDS-3UTR CCA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATACCCTCTCATGGCTaGCTCACCTTTCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AKWFRLATSSHNRDFPPAIPSHG*LTFRAG
Trigger: CCCCGCCCGAAAGGTGAGCCAGCCATGAGAGGGTAT...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
CDS-3UTR CCA 90 bp CTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCGAAACCAAAGGAAGGTaGCGCGGGCCAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LATSSHNRDFPPAMFTVAETKGR*RGPGAA
Trigger: CGCCGCCCCTGGCCCGCGCCACCTTCCTTTGGTTTC...GGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394162.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGCTGCAGGAGCTAAAGTaGGGGGTGGCCGGGTACTCC +
Preference number: 4 (lower is better)
Translates to: LRFPEPSGFGLPHQATIVLQELK*GVAGYS
Trigger: GGAGTACCCGGCCACCCCTCACTTTAGCTCCTGCAG...CACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
CDS-3UTR GCA 90 bp GACTGGCTTGCATTGGATCAGATTCTCTGGTGCACCCTAGGTAGCCAGGCAAGCCTTCAGCAGCCACACTaGAGCCTATGGCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: DWLALDQILWCTLGSQASLQQPH*SLWLCG
Trigger: ACCACACAGCCATAGGCTGCAGTGTGGCTGCTGAAG...GCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAAGAAACCAAAGGAAGGTaGCGCGGGCCAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ATSSHNRDFPPAMFTVAKETKGR*RGPGAA
Trigger: CGCCGCCCCTGGCCCGCGCCACCTTCCTTTGGTTTC...TTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394162.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGATACCCTCTCATGGCTaGCTCACCCGGGCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQIPSHG*LTRAVQ
Trigger: TTGCACTGCCCGGGTGAGCCAGCCATGAGAGGGTAT...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS-3UTR GCA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCAAAGAGGGACCAGGCTaGCAAAGACTCAGGACGCTG +
Preference number: 4 (lower is better)
Translates to: AKWFRLATSSHNRDFPPAKEGPG*QRLRTL
Trigger: CAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTT...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR TCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGCTGCAGGAGCTAAAGTaGGGGGTGGCCGGGTACTCC +
Preference number: 4 (lower is better)
Translates to: EGRLAHHICRIDWLALDQLQELK*GVAGYS
Trigger: GGAGTACCCGGCCACCCCTCACTTTAGCTCCTGCAG...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265261.10
ENST00000469105.5
CDS-3UTR TCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGGATCAGATTCTCTGGTaGACCCTAGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQDQILW*TLGSQA
Trigger: TGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATC...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCTTCAGCAGCCACACTaGAGCCTATGGCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHLQQPH*SLWLCG
Trigger: ACCACACAGCCATAGGCTGCAGTGTGGCTGCTGAAG...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTCCTTCCCCGCGGATCTaGCGGGGGAGCAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTPSPRI*RGSRGG
Trigger: CCCTCCTCTGCTCCCCCGCCAGATCCGCGGGGAAGG...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTGAAACCAAAGGAAGGTaGCGCGGGCCAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSETKGR*RGPGAA
Trigger: CGCCGCCCCTGGCCCGCGCCACCTTCCTTTGGTTTC...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394162.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TGGAGAATTTGCGAAAGAGGGACCAGGCTGCCAAAGACTCAGGACGCTGCCTGCTGCCTGCTGAATTGCTaGGGCCTCTCTGTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: WRICERGTRLPKTQDAACCLLNC*GLSVRN
Trigger: ATTTCTAACAGAGAGGCCCCAGCAATTCAGCAGGCA...GCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR TCA 90 bp GGAGAATTTGCGAAAGAGGGACCAGGCTGCCAAAGACTCAGGACGCTGCCTGCTATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: GEFAKEGPGCQRLRTLPAIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...AGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR TCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTCTGCAGTCACATTGTaGTACGCGTTCTTATTCATC +
Preference number: 4 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLSAVTL*YAFLFI
Trigger: GATGAATAAGAACGCGTATCACAATGTGACTGCAGA...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TTGCGAAAGAGGGACCAGGCTGCCAAAGACTCAGGACGCTGCCTGCTGAATTGCTCTGCAGTCACATTGTaGTACGCGTTCTTATTCATC +
Preference number: 4 (lower is better)
Translates to: LRKRDQAAKDSGRCLLNCSAVTL*YAFLFI
Trigger: GATGAATAAGAACGCGTATCACAATGTGACTGCAGA...GCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR TCA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: AKWFRLATSSHNRDFPPALSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GAAGACAGCACTCAGGAATATGGCCACAAGATACCCTCTCATGGCTGGCTCACCTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: EDSTQEYGHKIPSHGWLTLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...GGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR TCA 90 bp ACAGTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACCAGGACGCTGCCTGCTaGATTGCTGGGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVFTEIKLVVMNHQAATDQDAAC*IAGASL
Trigger: CAGAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTG...GTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR GCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCACAAGTGGTTTCGGCTTaGCACATCAAGCCACAATCG +
Preference number: 4 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPQVVSA*HIKPQS
Trigger: CGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTG...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp GACTGGCTTGCATTGGATCAGATTCTCTGGTGCACCCTAGGTAGCCAGGCAAGCCATGGCTGGCTCACCTaGACTTTTAAGAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: DWLALDQILWCTLGSQASHGWLT*TFKNLC
Trigger: ACACAGATTCTTAAAAGTGCAGGTGAGCCAGCCATG...GCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394162.5
CDS-3UTR CCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCACCGCCCTGGTTTGTTTaGAAAGCTGCAGGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPPPWFV*KAAGAK
Trigger: TTTAGCTCCTGCAGCTTTCCAAACAAACCAGGGCGG...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
CDS-3UTR CCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTCATCAAAGACATGGTaGCATTCCCATAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLSSKTW*HSHSSA
Trigger: TGCACTACTATGGGAATGCCACCATGTCTTTGATGA...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGGAGGAATCAAAACTGTaGGACTCTGCAAACATATGC +
Preference number: 4 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLEESKL*DSANIC
Trigger: GCATATGTTTGCAGAGTCCCACAGTTTTGATTCCTC...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGAGGTTGGTAAGGACTTaGGGGCGGGGAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AVLKEQVENIPLMFSSHRRLVRT*GRGGLS
Trigger: GGACAGCCCTCCCCGCCCCCAAGTCCTTACCAACCT...CCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000495376.5
3UTR CAA 72 bp TGTCCTAAAGACCCTCTGTTCGCAAAGGTGGAGAATTaGCGAAAGAGGGACCAGGCTGCCAAAGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: CPKDPLFAKVEN*RKRDQAAKDSG
Trigger: TCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAGGGTCTTTAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR TCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCAGGCAGAAGTAAACACTaGGGCTTGTGGCGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPGRSKH*GLWRRG
Trigger: TCCGCGGCGCCACAAGCCTCAGTGTTTACTTCTGCC...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469105.5
CDS-3UTR TCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTGGCAGAAGTAAACACTaGGGCTTGTGGCGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSGRSKH*GLWRRG
Trigger: TCCGCGGCGCCACAAGCCTCAGTGTTTACTTCTGCC...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
CDS-3UTR TCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGATATATGCAGAGCTCTaGCTCAGCAGAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQIYAEL*LSREAK
Trigger: TTTTGCCTCTCTGCTGAGTCAGAGCTCTGCATATAT...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGGTTAGCATCATCTTCTaGGTCTGTAGAGTCAATCTT +
Preference number: 4 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLVSIIF*VCRVNL
Trigger: AAGATTGACTCTACAGACTCAGAAGATGATGCTAAC...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CATTCGTTCCCCATAATATGCAATGCAGTACATAATAGAGGAAGACAGCACTCACAGGACGCTGCCTGCTaGATTGCTGGGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSFPIICNAVHNRGRQHSQDAAC*IAGASL
Trigger: CAGAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTG...TGAGTGCTGTCTTCCTCTATTATGTACTGCATTGCATATTATGGGGAACGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR CCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCACAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp AGATGCTCCTTCAGTGTGTGCCTGAAACCTCGCCTTGTGGACACATCTCATGTCCAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RCSFSVCLKPRLVDTSHVQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...GACATGAGATGTGTCCACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR CCA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCTTGACTGGCTTGCATTaGATCAGATTCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: AKWFRLATSSHNRDFPPALTGLH*IRFSGA
Trigger: TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAA...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACACCACACTGCAGCCTATaGCTGTGTGGTATGAGGGGA +
Preference number: 4 (lower is better)
Translates to: FRLATSSHNRDFPPAMFTPHCSL*LCGMRG
Trigger: TCCCCTCATACCACACAGCCATAGGCTGCAGTGTGG...TGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACATATATGCAGAGCTCTaGCTCAGCAGAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHIYAEL*LSREAK
Trigger: TTTTGCCTCTCTGCTGAGTCAGAGCTCTGCATATAT...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp GTGCCTGAAACCTCGCCTTGTGGACACATCTCATGTCACAGTAGGTTCCAGAAGATATATGCAGAGCTCTaGCTCAGCAGAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VPETSPCGHISCHSRFQKIYAEL*LSREAK
Trigger: TTTTGCCTCTCTGCTGAGTCAGAGCTCTGCATATAT...CTTCTGGAACCTACTGTGACATGAGATGTGTCCACAAGGCGAGGTTTCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR TCA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGCTGATGAAACCTGTGTaGAAAGAATACTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLLMKPV*KEYWFD
Trigger: ATCAAACCAGTATTCTTTTCACACAGGTTTCATCAG...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GACTGGCTTGCATTGGATCAGATTCTCTGGTGCACCCTAGGTAGCCAGGCAAGCGGCAAGCTTTCCATCTaGAGATTAGCTTTAATCATG +
Preference number: 4 (lower is better)
Translates to: DWLALDQILWCTLGSQASGKLSI*RLALIM
Trigger: CATGATTAAAGCTAATCTTCAGATGGAAAGCTTGCC...GCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATATGGCTGTGTGGTATaGGGGGAAAATCACACTGAT +
Preference number: 4 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPYGCVV*GENHTD
Trigger: ATCAGTGTGATTTTCCCCTCATACCACACAGCCATA...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp ACGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACCTTCAGCAGCCACACTaGAGCCTATGGCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TRSYSSKTWWHSHSSAKDLQQPH*SLWLCG
Trigger: ACCACACAGCCATAGGCTGCAGTGTGGCTGCTGAAG...GTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486249.5
CDS-3UTR GCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGTGCTGCTTCCTCACTTaGAAATGCCGGGCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: EGRLAHHICRIDWLALDQCCFLT*KCRAVQ
Trigger: TTGCACTGCCCGGCATTTGCAAGTGAGGAAGCAGCA...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394162.5
CDS-3UTR GCA 90 bp GCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCTACTGGAAGTCCTTaGTGTCCAGCAGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: AVLKEQVENIPLMFSSHRATGSP*CPAGGS
Trigger: GCTTCCGCCTGCTGGACAGCAAGGACTTCCAGTAGC...CCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR CCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCAAGGAAAGGCGGCGGGTaGCTTCAGGACAAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPRKGGG*LQDKVG
Trigger: TCCTACCTTGTCCTGAAGCCACCCGCCGCCTTTCCT...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469105.5
CDS-3UTR CCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATACCCTCTCATGGCTaGCTCACCTTTCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLIPSHG*LTFRAG
Trigger: CCCCGCCCGAAAGGTGAGCCAGCCATGAGAGGGTAT...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CCA 90 bp TTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATAATACCCTCTCATGGCTaGCTCACCTTTCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: FTEIKLVVMNHQAATDSIIPSHG*LTFRAG
Trigger: CCCCGCCCGAAAGGTGAGCCAGCCATGAGAGGGTAT...TATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
CDS-3UTR CCA 90 bp GAGCTGCTCTGCAGTCACATTGTGATACGCGTTCTTATTCATCAAAGACATGGTCAAGATACCCTCTCATaGCTGGCTCACCTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: ELLCSHIVIRVLIHQRHGQDTLS*LAHLSG
Trigger: GCCCGAAAGGTGAGCCAGCCATGAGAGGGTATCTTG...ACCATGTCTTTGATGAATAAGAACGCGTATCACAATGTGACTGCAGAGCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CCA 90 bp AGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTCAAGATACCCTCTCATaGCTGGCTCACCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: RFPEPSGFGLPHQATIVIQDTLS*LAHLHF
Trigger: AAAGTGCAGGTGAGCCAGCCATGAGAGGGTATCTTG...AATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR CCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATGTCCATTCAGCCCCTaGACAGGCCGTCATCCATCC +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPCPFSP*TGRHPS
Trigger: GGATGGATGACGGCCTGTCCAGGGGCTGAATGGACA...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476833.5
ENST00000495376.5
CDS-3UTR TCA 90 bp GACTGGCTTGCATTGGATCAGATTCTCTGGTGCACCCTAGGTAGCCAGGCAAGCGGGTGTTTAGGTTTCTaGTTTTTGGGAAACACTTTT +
Preference number: 4 (lower is better)
Translates to: DWLALDQILWCTLGSQASGCLGF*FLGNTF
Trigger: AAAAGTGTTTCCCAAAAATCAGAAACCTAAACACCC...GCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATCTGCAGTCACATTGTaGTACGCGTTCTTATTCATC +
Preference number: 4 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPSAVTL*YAFLFI
Trigger: GATGAATAAGAACGCGTATCACAATGTGACTGCAGA...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGTCTGCAGTCACATTGTaGTACGCGTTCTTATTCATC +
Preference number: 4 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQSAVTL*YAFLFI
Trigger: GATGAATAAGAACGCGTATCACAATGTGACTGCAGA...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACAGCTCATACCTCTTCTaGCAACTTTTAGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHSSYLF*QLLVPS
Trigger: GGATGGAACTAAAAGTTGTCAGAAGAGGTATGAGCT...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GACTGGCTTGCATTGGATCAGATTCTCTGGTGCACCCTAGGTAGCCAGGCAAGCTTACTTTATATCAATTaGACTTCAGCAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: DWLALDQILWCTLGSQASLLYIN*TSAATL
Trigger: CAGTGTGGCTGCTGAAGTTCAATTGATATAAAGTAA...GCTTGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAATGCAAGCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTGTCCAGCAGATGCTCCTTCAGTGTGTGCCTGAAACCTCGCCTTGTGGACACAAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LSSRCSFSVCLKPRLVDTKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...TGTGTCCACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCATCTGCTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR CCA 90 bp TTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACATTGGATCAGATTCTCTaGTGCACCCTAGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: FRLATSSHNRDFPPAMFTLDQIL*CTLGSQ
Trigger: CTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAA...TGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGTTGGATCAGATTCTCTaGTGCACCCTAGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: EGRLAHHICRIDWLALDQLDQIL*CTLGSQ
Trigger: CTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAA...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGAAAAGAATACTGGTTTaGTTGAGTTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQKRILV*LSSSMP
Trigger: AGGCATTGAGGAACTCAATCAAACCAGTATTCTTTT...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCGGGTGTTTAGGTTTCTaGTTTTTGGGAAACACTTTT +
Preference number: 4 (lower is better)
Translates to: AKWFRLATSSHNRDFPPAGCLGF*FLGNTF
Trigger: AAAAGTGTTTCCCAAAAATCAGAAACCTAAACACCC...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACAGTGCAAAGGACTCTTaGGGTCAGAAAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHSAKDS*GQKSCI
Trigger: AATACAACTTTTCTGACCTCAAGAGTCCTTTGCACT...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: EGRLAHHICRIDWLALDQLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCCAAAAAGAGCTGCTCTaGAGTCACATTGTGATACGC +
Preference number: 4 (lower is better)
Translates to: LATSSHNRDFPPAMFTVAQKELL*SHIVIR
Trigger: GCGTATCACAATGTGACTGCAGAGCAGCTCTTTTTG...GGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp AGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTCAAAAAGAGCTGCTCTaGAGTCACATTGTGATACGC +
Preference number: 4 (lower is better)
Translates to: RFPEPSGFGLPHQATIVIQKELL*SHIVIR
Trigger: GCGTATCACAATGTGACTGCAGAGCAGCTCTTTTTG...AATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGCTCAAGCAATTCTCGTaGCTCAGCCTCCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLLKQFS*LSLPST
Trigger: GGTACTCGGGAGGCTGAGGCACGAGAATTGCTTGAG...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR GCA 90 bp ACAGTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACGATCAGATTCTCTGGTaGACCCTAGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TVFTEIKLVVMNHQAATDDQILW*TLGSQA
Trigger: TGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATC...GTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGCTGGTACCTTCCTTTTaGACCTCAAAAAGTTATAAG +
Preference number: 4 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQLVPSF*TSKSYK
Trigger: CTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAG...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATGCTGCTTCCTCACTTaGAAATGCCGGGCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPCCFLT*KCRAVQ
Trigger: TTGCACTGCCCGGCATTTGCAAGTGAGGAAGCAGCA...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR GCA 90 bp AACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAACAAAGGTGGAGAATTTaGGAAAGAGGGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NQYELRFPEPSGFGLPHQQRWRI*ERGTRL
Trigger: CAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTG...TTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR GCA 90 bp ATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACATGCTCCTTCAGTGTGTaGCTGAAACCTCGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: IPLMFSSHRANQTYRYHTCSFSV*LKPRLV
Trigger: CACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCA...TGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR GCA 90 bp CAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATGGGCTGTCCAGCAGATaGTCCTTCAGTGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QVENIPLMFSSHRANQTYGLSSR*SFSVCL
Trigger: CAGGCACACACTGAAGGAGCATCTGCTGGACAGCCC...ATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR CCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGCAAGATACCCTCTCATaGCTGGCTCACCTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRQDTLS*LAHLSG
Trigger: GCCCGAAAGGTGAGCCAGCCATGAGAGGGTATCTTG...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265261.10
ENST00000486249.5
CDS-3UTR CCA 90 bp TCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATCAAGATACCCTCTCATaGCTGGCTCACCTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: SAVLKEQVENIPLMFSSHQDTLS*LAHLSG
Trigger: GCCCGAAAGGTGAGCCAGCCATGAGAGGGTATCTTG...ATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CCA 90 bp GCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAACAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: ATSSHNRDFPPAMFTVAKQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...TTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACACAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FRLATSSHNRDFPPAMFTQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...TGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTCTTGAGGTCAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: HQRHGGIPIVVQRTLEVRQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...TCTGACCTCAAGAGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CCA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCTATTCATCAAAGACATaGTGGCATTCCCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: AKWFRLATSSHNRDFPPAYSSKT*WHSHSS
Trigger: ACTACTATGGGAATGCCACCATGTCTTTGATGAATA...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 4 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCTTGACTGGCTTGCATTaGATCAGATTCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LATSSHNRDFPPAMFTVALTGLH*IRFSGA
Trigger: TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAA...GGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGCCACACTGCAGCCTATaGCTGTGTGGTATGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRPHCSL*LCGMRG
Trigger: TCCCCTCATACCACACAGCCATAGGCTGCAGTGTGG...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCATGCCTGCTGAATTGCTaGGGCCTCTCTGTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGACLLNC*GLSVRN
Trigger: ATTTCTAACAGAGAGGCCCCAGCAATTCAGCAGGCA...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394162.5
CDS-3UTR CCA 90 bp TTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACACTCTGTTCGCAAAGGTaGAGAATTTGCGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FRLATSSHNRDFPPAMFTLCSQR*RICERG
Trigger: CCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAG...TGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR CCA 90 bp CTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGATACCCTCTCATGGCTaGCTCACCTTTACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LMFSSHRANQTYRYHTRKIPSHG*LTFTRW
Trigger: CCACCTGGTAAAGGTGAGCCAGCCATGAGAGGGTAT...CTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR TCA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTATATATGCAGAGCTCTaGCTCAGCAGAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSIYAEL*LSREAK
Trigger: TTTTGCCTCTCTGCTGAGTCAGAGCTCTGCATATAT...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265261.10
ENST00000486249.5
CDS-3UTR TCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCAAAAAGAATACTGGTTTaGTTGAGTTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPKRILV*LSSSMP
Trigger: AGGCATTGAGGAACTCAATCAAACCAGTATTCTTTT...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCACTGATGAAACCTGTGTaGAAAGAATACTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPLMKPV*KEYWFD
Trigger: ATCAAACCAGTATTCTTTTCACACAGGTTTCATCAG...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGGGGTGTTTAGGTTTCTaGTTTTTGGGAAACACTTTT +
Preference number: 4 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQGCLGF*FLGNTF
Trigger: AAAAGTGTTTCCCAAAAATCAGAAACCTAAACACCC...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCTCTGCAGTCACATTGTaGTACGCGTTCTTATTCATC +
Preference number: 4 (lower is better)
Translates to: LATSSHNRDFPPAMFTVASAVTL*YAFLFI
Trigger: GATGAATAAGAACGCGTATCACAATGTGACTGCAGA...GGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTTTAAGCTGGTGGTTATaGATCACCAGGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: RVLIHQRHGGIPIVVQRTLSWWL*ITRQQQ
Trigger: CTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAA...AGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR TCA 90 bp CTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGGGCAAGCTTTCCATCTaGAGATTAGCTTTAATCATG +
Preference number: 4 (lower is better)
Translates to: LRFPEPSGFGLPHQATIVGKLSI*RLALIM
Trigger: CATGATTAAAGCTAATCTTCAGATGGAAAGCTTGCC...CACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAATATGGCTGTGTGGTATaGGGGGAAAATCACACTGAT +
Preference number: 4 (lower is better)
Translates to: ATSSHNRDFPPAMFTVAKYGCVV*GENHTD
Trigger: ATCAGTGTGATTTTCCCCTCATACCACACAGCCATA...TTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGTCGTTCCCCATAATATaGAATGCAGTACATAATAGA +
Preference number: 4 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQSFPII*NAVHNR
Trigger: TCTATTATGTACTGCATTGCATATTATGGGGAACGA...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTCAAGTGGTTTCGGCTTaGCACATCAAGCCACAATCG +
Preference number: 4 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFIQVVSA*HIKPQS
Trigger: CGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTG...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACTTCTCCCCTTTATTCTaGTTTATAAGTACCGCATTC +
Preference number: 4 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHFSPLF*FISTAF
Trigger: GAATGCGGTACTTATAAAGCAGAATAAAGGGGAGAA...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATAAAGAGGGACCAGGCTaGCAAAGACTCAGGACGCTG +
Preference number: 4 (lower is better)
Translates to: QVENIPLMFSSHRANQTYKEGPG*QRLRTL
Trigger: CAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTT...ATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR GCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCACAAAGGTGGAGAATTTaGGAAAGAGGGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPQRWRI*ERGTRL
Trigger: CAGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTG...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR CCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTCCGCCCTGGTTTGTTTaGAAAGCTGCAGGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSPPWFV*KAAGAK
Trigger: TTTAGCTCCTGCAGCTTTCCAAACAAACCAGGGCGG...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
CDS-3UTR CCA 90 bp GCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAATTGACTGGCTTGCATTaGATCAGATTCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ATSSHNRDFPPAMFTVAKLTGLH*IRFSGA
Trigger: TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAA...TTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGTCTGCAAACATATGCTaGTATTCATGTCTAATCTGG +
Preference number: 4 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQSANIC*YSCLIW
Trigger: CCAGATTAGACATGAATACCAGCATATGTTTGCAGA...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGCCACACTGCAGCCTATaGCTGTGTGGTATGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLPHCSL*LCGMRG
Trigger: TCCCCTCATACCACACAGCCATAGGCTGCAGTGTGG...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCACAAGATACCCTCTCATaGCTGGCTCACCTTTACCAG +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPQDTLS*LAHLYQ
Trigger: CTGGTAAAGGTGAGCCAGCCATGAGAGGGTATCTTG...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR CCA 90 bp AACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCAGCTGAGAAGCTACTaGAAGTCCTTGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NSAVLKEQVENIPLMFSSQLRSY*KSLLSS
Trigger: GCTGGACAGCAAGGACTTCCAGTAGCTTCTCAGCTG...GGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476833.5
3UTR CAA 72 bp TATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATCGTGATTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: YELRFPEPSGFG*PHQATIVIFHQ
Trigger: CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp AGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTGTTAGCATCATCTTCTaGGTCTGTAGAGTCAATCTT +
Preference number: 4 (lower is better)
Translates to: RFPEPSGFGLPHQATIVIVSIIF*VCRVNL
Trigger: AAGATTGACTCTACAGACTCAGAAGATGATGCTAAC...AATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCGGCAAGCTTTCCATCTaGAGATTAGCTTTAATCATG +
Preference number: 4 (lower is better)
Translates to: LATSSHNRDFPPAMFTVAGKLSI*RLALIM
Trigger: CATGATTAAAGCTAATCTTCAGATGGAAAGCTTGCC...GGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTTGTCTTCAGCTCACACTaGCATACACTCCAGACTGTG +
Preference number: 4 (lower is better)
Translates to: SHPIGQIKLIATIQGSNLVFSSH*HTLQTV
Trigger: CACAGTCTGGAGTGTATGTCAGTGTGAGCTGAAGAC...AAGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR GCA 90 bp CTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LRFPEPSGFGLPHQATIVKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...CACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGCAAGTGGTTTCGGCTTaGCACATCAAGCCACAATCG +
Preference number: 4 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRQVVSA*HIKPQS
Trigger: CGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTG...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGCAAGTGGTTTCGGCTTaGCACATCAAGCCACAATCG +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLQVVSA*HIKPQS
Trigger: CGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTG...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR GCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGCTCAAGCAATTCTCGTaGCTCAGCCTCCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGLKQFS*LSLPST
Trigger: GGTACTCGGGAGGCTGAGGCACGAGAATTGCTTGAG...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCAACCCAGGGTTGTGCTaGTTCCTCACTTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: QLCSFERASRKYSADVLINPGLC*FLTCKC
Trigger: GCATTTGCAAGTGAGGAAGCAGCACAACCCTGGGTT...GATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR GCA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGAAAGACTCAGGACGCTaGCTGCTGAATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQKDSGR*LLNCWG
Trigger: GCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTT...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR CCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTAGGAAAGGCGGCGGGTaGCTTCAGGACAAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVRKGGG*LQDKVG
Trigger: TCCTACCTTGTCCTGAAGCCACCCGCCGCCTTTCCT...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
CDS-3UTR CCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGCAAGATACCCTCTCATaGCTGGCTCACCTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGQDTLS*LAHLSG
Trigger: GCCCGAAAGGTGAGCCAGCCATGAGAGGGTATCTTG...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
CDS-3UTR CCA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTTCATCAAAGACATGGTaGCATTCCCATAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSSSKTW*HSHSSA
Trigger: TGCACTACTATGGGAATGCCACCATGTCTTTGATGA...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCATCATCAAAGACATGGTaGCATTCCCATAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGASSKTW*HSHSSA
Trigger: TGCACTACTATGGGAATGCCACCATGTCTTTGATGA...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGTATTCATCAAAGACATaGTGGCATTCCCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: LRFPEPSGFGLPHQATIVYSSKT*WHSHSS
Trigger: ACTACTATGGGAATGCCACCATGTCTTTGATGAATA...CACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCAATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CCA 90 bp TCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATTTGGATCAGATTCTCTaGTGCACCCTAGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: SAVLKEQVENIPLMFSSHLDQIL*CTLGSQ
Trigger: CTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAA...ATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CCA 90 bp AACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAATTGACTGGCTTGCATTaGATCAGATTCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NQYELRFPEPSGFGLPHQLTGLH*IRFSGA
Trigger: TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAA...TTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp AGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTCAGTAATCAAGCCATaGTTTTCCAGTGTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RFPEPSGFGLPHQATIVISVIKP*FSSVSQ
Trigger: TTGGGAAACACTGGAAAACCATGGCTTGATTACTGA...AATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTGAGGAATCAAAACTGTaGGACTCTGCAAACATATGC +
Preference number: 4 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSEESKL*DSANIC
Trigger: GCATATGTTTGCAGAGTCCCACAGTTTTGATTCCTC...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGCCACACTGCAGCCTATaGCTGTGTGGTATGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGPHCSL*LCGMRG
Trigger: TCCCCTCATACCACACAGCCATAGGCTGCAGTGTGG...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCACTCTGTTCGCAAAGGTaGAGAATTTGCGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPLCSQR*RICERG
Trigger: CCCTCTTTCGCAAATTCTCCACCTTTGCGAACAGAG...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR CCA 90 bp TTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACAAGATACCCTCTCATaGCTGGCTCACCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: FTEIKLVVMNHQAATDSIQDTLS*LAHLHF
Trigger: AAAGTGCAGGTGAGCCAGCCATGAGAGGGTATCTTG...TATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR CCA 90 bp TTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTCATCCTAGTCTCTGCTaGTCTTCAGCTCACACTGAC +
Preference number: 4 (lower is better)
Translates to: FSSHRANQTYRYHTRKQSHPSLC*SSAHTD
Trigger: GTCAGTGTGAGCTGAAGACCAGCAGAGACTAGGATG...AGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR CCA 90 bp ATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAATACCCTCTCATGGCTaGCTCACCTCCATACCTTTA +
Preference number: 4 (lower is better)
Translates to: IPLMFSSHRANQTYRYHTIPSHG*LTSIPL
Trigger: TAAAGGTATGGAGGTGAGCCAGCCATGAGAGGGTAT...TGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR CCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTACAAGATACCCTCTCATaGCTGGCTCACCCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLQDTLS*LAHPGS
Trigger: ACTGCCCGGGTGAGCCAGCCATGAGAGGGTATCTTG...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS-3UTR TCA 90 bp GCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGATATATGCAGAGCTCTaGCTCAGCAGAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: AVLKEQVENIPLMFSSHRIYAEL*LSREAK
Trigger: TTTTGCCTCTCTGCTGAGTCAGAGCTCTGCATATAT...CCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
CDS-3UTR TCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCAGAATACTGGTTTGATTaGGTTCCTCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGAEYWFD*VPQCLF
Trigger: GAAAAGGCATTGAGGAACTCAATCAAACCAGTATTC...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp CTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 4 (lower is better)
Translates to: LATSSHNRDFPPAMFTVATTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...GGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTAGTGCAAAGGACTCTTaGGGTCAGAAAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSSAKDS*GQKSCI
Trigger: AATACAACTTTTCTGACCTCAAGAGTCCTTTGCACT...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTCTTGAGGTCAGAGTTAGCATCATCTTCTaGGTCTGTAGAGTCAATCTT +
Preference number: 4 (lower is better)
Translates to: HQRHGGIPIVVQRTLEVRVSIIF*VCRVNL
Trigger: AAGATTGACTCTACAGACTCAGAAGATGATGCTAAC...TCTGACCTCAAGAGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR TCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp ACAGTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACATCAAGCCACAATCGTaGTTTTCCACCAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: TVFTEIKLVVMNHQAATDIKPQS*FSTSHV
Trigger: AACATGGCTGGTGGAAAATCACGATTGTGGCTTGAT...GTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp ACGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACAGCTCATACCTCTTCTaGCAACTTTTAGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: TRSYSSKTWWHSHSSAKDSSYLF*QLLVPS
Trigger: GGATGGAACTAAAAGTTGTCAGAAGAGGTATGAGCT...GTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp TTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACACTGATTGATTACATGTaGTTCCAGTTCTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: FRLATSSHNRDFPPAMFTLIDYM*FQFWYL
Trigger: AAGGTACCAGAACTGGAATCACATGTAATCAATCAG...TGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCACTGATTGATTACATGTaGTTCCAGTTCTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGALIDYM*FQFWYL
Trigger: AAGGTACCAGAACTGGAATCACATGTAATCAATCAG...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATCAGATCTGGCTATTGTaGGAGTCATGGTACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SAVLKEQVENIPLMFSSHQIWLL*ESWYSL
Trigger: AAGGCTGTACCATGACTCTCACAATAGCCAGATCTG...ATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR GCA 90 bp CTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGTCGTTCCCCATAATATaGAATGCAGTACATAATAGA +
Preference number: 4 (lower is better)
Translates to: LRFPEPSGFGLPHQATIVSFPII*NAVHNR
Trigger: TCTATTATGTACTGCATTGCATATTATGGGGAACGA...CACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTCTCAAGCAATTCTCGTaGCTCAGCCTCCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVLKQFS*LSLPST
Trigger: GGTACTCGGGAGGCTGAGGCACGAGAATTGCTTGAG...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTACTCAAGCAATTCTCGTaGCTCAGCCTCCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLLKQFS*LSLPST
Trigger: GGTACTCGGGAGGCTGAGGCACGAGAATTGCTTGAG...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGATCAGATTCTCTGGTaGACCCTAGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGDQILW*TLGSQA
Trigger: TGCCTGGCTACCTAGGGTGCACCAGAGAATCTGATC...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGAAAACTGTGGGACTCTaGAAACATATGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: LAHHICRIDWLALDQILWKTVGL*KHMLVF
Trigger: GAATACCAGCATATGTTTGCAGAGTCCCACAGTTTT...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp GCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAAAAAACTGTGGGACTCTaGAAACATATGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: ATSSHNRDFPPAMFTVAKKTVGL*KHMLVF
Trigger: GAATACCAGCATATGTTTGCAGAGTCCCACAGTTTT...TTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTACTTCAGCAGCCACACTaGAGCCTATGGCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLLQQPH*SLWLCG
Trigger: ACCACACAGCCATAGGCTGCAGTGTGGCTGCTGAAG...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTAAAGACTCAGGACGCTaGCTGCTGAATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVKDSGR*LLNCWG
Trigger: GCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTT...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR CCA 90 bp TTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FTEIKLVVMNHQAATDSIQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...TATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGCAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR CCA 90 bp CGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTTCATCAAAGACATGGTaGCATTCCCATAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: RVLIHQRHGGIPIVVQRTSSKTW*HSHSSA
Trigger: TGCACTACTATGGGAATGCCACCATGTCTTTGATGA...AGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGGTGCAGGTTGTTACATaGGTATATTGTGTGATACTG +
Preference number: 4 (lower is better)
Translates to: EGRLAHHICRIDWLALDQVQVVT*VYCVIL
Trigger: CAGTATCACACAATATACCCATGTAACAACCTGCAC...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTATACCCTCTCATGGCTaGCTCACCTGCACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTIPSHG*LTCTFK
Trigger: CTTAAAAGTGCAGGTGAGCCAGCCATGAGAGGGTAT...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394162.5
CDS-3UTR CCA 90 bp TTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTATACCCTCTCATGGCTaGCTCACCTGCACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: FSSHRANQTYRYHTRKQSIPSHG*LTCTFK
Trigger: CTTAAAAGTGCAGGTGAGCCAGCCATGAGAGGGTAT...AGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR CCA 90 bp TCTCTGTTTTTGTCAAACTCATCAAAGAGATCACAACTCTGCAGTTTTGAAAGACAGGCGGAAGCCTCATaGTCCTGGGCTCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLFLSNSSKRSQLCSFERQAEAS*SWALCF
Trigger: AAAACAGAGAGCCCAGGACCATGAGGCTTCCGCCTG...TCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGTTTGACAAAAACAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR CCA 90 bp CACATCTCATGTCACAGTAGGTTCCAGAAGGGTCTGTTTGTTCATTTAAATTTTCAAGATACCCTCTCATaGCTGGCTCACCTCCATACC +
Preference number: 4 (lower is better)
Translates to: HISCHSRFQKGLFVHLNFQDTLS*LAHLHT
Trigger: GGTATGGAGGTGAGCCAGCCATGAGAGGGTATCTTG...AAAATTTAAATGAACAAACAGACCCTTCTGGAACCTACTGTGACATGAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495376.5
3UTR CAA 72 bp GTACATGTGCAGAGTGCAGGTTGTTACATGGGTATATaGTGTGATACTGAGGTTTGTGGTATGAATGATCCC +
Preference number: 4 (lower is better)
Translates to: VHVQSAGCYMGI*CDTEVCGMNDP
Trigger: GGGATCATTCATACCACAAACCTCAGTATCACACAATATACCCATGTAACAACCTGCACTCTGCACATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
3UTR CAA 72 bp ACTGATGAAACCTCAGCAGAGAGGCAAAAGCTGGCTTaGATAAACAAGGCTGGATCTTATTTCTCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: TDETSAERQKLA*INKAGSYFSVS
Trigger: TGAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAAGCCAGCTTTTGCCTCTCTGCTGAGGTTTCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR TCA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 4 (lower is better)
Translates to: LAHHICRIDWLALDQILWTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp AGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTCGTTCCCCATAATATaGAATGCAGTACATAATAGA +
Preference number: 4 (lower is better)
Translates to: RFPEPSGFGLPHQATIVISFPII*NAVHNR
Trigger: TCTATTATGTACTGCATTGCATATTATGGGGAACGA...AATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp GTGTTTATTTTGTCACCCATCAACAATTCCAACAGCCACCTTAAATCATGTGGCCAAAAAGAGCTGCTCTaGAGTCACATTGTGATACGC +
Preference number: 4 (lower is better)
Translates to: VFILSPINNSNSHLKSCGQKELL*SHIVIR
Trigger: GCGTATCACAATGTGACTGCAGAGCAGCTCTTTTTG...GCCACATGATTTAAGGTGGCTGTTGGAATTGTTGATGGGTGACAAAATAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR GCA 90 bp TTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACATTCTCCCCTTTATTCTaGTTTATAAGTACCGCATTC +
Preference number: 4 (lower is better)
Translates to: FRLATSSHNRDFPPAMFTFSPLF*FISTAF
Trigger: GAATGCGGTACTTATAAAGCAGAATAAAGGGGAGAA...TGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCATTCTCCCCTTTATTCTaGTTTATAAGTACCGCATTC +
Preference number: 4 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGAFSPLF*FISTAF
Trigger: GAATGCGGTACTTATAAAGCAGAATAAAGGGGAGAA...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGTTCTCCCCTTTATTCTaGTTTATAAGTACCGCATTC +
Preference number: 4 (lower is better)
Translates to: EGRLAHHICRIDWLALDQFSPLF*FISTAF
Trigger: GAATGCGGTACTTATAAAGCAGAATAAAGGGGAGAA...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp AACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAAAAACTGTGGGACTCTaGAAACATATGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: NQYELRFPEPSGFGLPHQKTVGL*KHMLVF
Trigger: GAATACCAGCATATGTTTGCAGAGTCCCACAGTTTT...TTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGAACCCAGGGTTGTGCTaGTTCCTCACTTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGNPGLC*FLTCKC
Trigger: GCATTTGCAAGTGAGGAAGCAGCACAACCCTGGGTT...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR GCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGCATGGCTGGCTCACCTaGACTTTTAAGAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLHGWLT*TFKNLC
Trigger: ACACAGATTCTTAAAAGTGCAGGTGAGCCAGCCATG...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS-3UTR CCA 90 bp ACAGTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACTCATCAAAGACATGGTaGCATTCCCATAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: TVFTEIKLVVMNHQAATDSSKTW*HSHSSA
Trigger: TGCACTACTATGGGAATGCCACCATGTCTTTGATGA...GTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTATTCATCAAAGACATaGTGGCATTCCCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: LAHHICRIDWLALDQILWYSSKT*WHSHSS
Trigger: ACTACTATGGGAATGCCACCATGTCTTTGATGAATA...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCATATTCATCAAAGACATaGTGGCATTCCCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGAYSSKT*WHSHSS
Trigger: ACTACTATGGGAATGCCACCATGTCTTTGATGAATA...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGTTGGATCAGATTCTCTaGTGCACCCTAGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGLDQIL*CTLGSQ
Trigger: CTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAA...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGTCTGCAAACATATGCTaGTATTCATGTCTAATCTGG +
Preference number: 4 (lower is better)
Translates to: EGRLAHHICRIDWLALDQSANIC*YSCLIW
Trigger: CCAGATTAGACATGAATACCAGCATATGTTTGCAGA...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp AACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGTGCAGGTTGTTACATaGGTATATTGTGTGATACTG +
Preference number: 4 (lower is better)
Translates to: NQYELRFPEPSGFGLPHQVQVVT*VYCVIL
Trigger: CAGTATCACACAATATACCCATGTAACAACCTGCAC...TTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCAGAATACTGGTTTGATTaGGTTCCTCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LCSFERASRKYSADVLIPEYWFD*VPQCLF
Trigger: GAAAAGGCATTGAGGAACTCAATCAAACCAGTATTC...TGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
CDS-3UTR TCA 90 bp AACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGGGTGTTTAGGTTTCTaGTTTTTGGGAAACACTTTT +
Preference number: 4 (lower is better)
Translates to: NQYELRFPEPSGFGLPHQGCLGF*FLGNTF
Trigger: AAAAGTGTTTCCCAAAAATCAGAAACCTAAACACCC...TTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp ACGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACGGGTGTTTAGGTTTCTaGTTTTTGGGAAACACTTTT +
Preference number: 4 (lower is better)
Translates to: TRSYSSKTWWHSHSSAKDGCLGF*FLGNTF
Trigger: AAAAGTGTTTCCCAAAAATCAGAAACCTAAACACCC...GTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR TCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTTCTGCAGTCACATTGTaGTACGCGTTCTTATTCATC +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTSAVTL*YAFLFI
Trigger: GATGAATAAGAACGCGTATCACAATGTGACTGCAGA...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp ACAGTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACGGCAAGCTTTCCATCTaGAGATTAGCTTTAATCATG +
Preference number: 4 (lower is better)
Translates to: TVFTEIKLVVMNHQAATDGKLSI*RLALIM
Trigger: CATGATTAAAGCTAATCTTCAGATGGAAAGCTTGCC...GTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp AACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAACCGCATTCTGTTTCTaGGCCAAATCTAATGTATTT +
Preference number: 4 (lower is better)
Translates to: NQYELRFPEPSGFGLPHQTAFCF*AKSNVF
Trigger: AAATACATTAGATTTGGCTCAGAAACAGAATGCGGT...TTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTAGGGGAAAATCACACTaGTTGATTACATGTGATTCC +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSRGKSH*LITCDS
Trigger: GGAATCACATGTAATCAATCAGTGTGATTTTCCCCT...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGAGAGGTATGGCTGTGTGGTATaGGGGGAAAATCACACTGAT +
Preference number: 4 (lower is better)
Translates to: VSEPNLMYFTLYTPSLERYGCVV*GENHTD
Trigger: ATCAGTGTGATTTTCCCCTCATACCACACAGCCATA...CCTCTCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTCTTGAGGTCAGATCGTTCCCCATAATATaGAATGCAGTACATAATAGA +
Preference number: 4 (lower is better)
Translates to: HQRHGGIPIVVQRTLEVRSFPII*NAVHNR
Trigger: TCTATTATGTACTGCATTGCATATTATGGGGAACGA...TCTGACCTCAAGAGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR GCA 90 bp CGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTAAGCAGTTCATAAGCTaGTGTTCTGATAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: RVLIHQRHGGIPIVVQRTKQFIS*CSDNER
Trigger: CCTTTCATTATCAGAACAGCAGCTTATGAACTGCTT...AGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR GCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTACAAGTGGTTTCGGCTTaGCACATCAAGCCACAATCG +
Preference number: 4 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLQVVSA*HIKPQS
Trigger: CGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTG...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTCTGGTACCTTCCTTTTaGACCTCAAAAAGTTATAAG +
Preference number: 4 (lower is better)
Translates to: RVLIHQRHGGIPIVVQRTLVPSF*TSKSYK
Trigger: CTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAG...AGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486249.5
CDS-3UTR CCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTACCGCCCTGGTTTGTTTaGAAAGCTGCAGGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLPPWFV*KAAGAK
Trigger: TTTAGCTCCTGCAGCTTTCCAAACAAACCAGGGCGG...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265261.10
CDS-3UTR CCA 90 bp GCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAATTTGATAAACAAGGCTaGATCTTATTTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: ATSSHNRDFPPAMFTVAKFDKQG*ILFLRF
Trigger: GAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAA...TTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTTTGATAAACAAGGCTaGATCTTATTTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: LAHHICRIDWLALDQILWFDKQG*ILFLRF
Trigger: GAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAA...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp AAAAGAGCTGCTCTGCAGTCACATTGTGATACGCGTTCTTATTCATCAAAGACATCATCAAAGACATGGTaGCATTCCCATAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: KRAALQSHCDTRSYSSKTSSKTW*HSHSSA
Trigger: TGCACTACTATGGGAATGCCACCATGTCTTTGATGA...TGTCTTTGATGAATAAGAACGCGTATCACAATGTGACTGCAGAGCAGCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CCA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 4 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTTTGGATCAGATTCTCTaGTGCACCCTAGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVLDQIL*CTLGSQ
Trigger: CTGGCTACCTAGGGTGCACCAGAGAATCTGATCCAA...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp ACAGTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACTCAGTAATCAAGCCATaGTTTTCCAGTGTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TVFTEIKLVVMNHQAATDSVIKP*FSSVSQ
Trigger: TTGGGAAACACTGGAAAACCATGGCTTGATTACTGA...GTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp GTGTTTATTTTGTCACCCATCAACAATTCCAACAGCCACCTTAAATCATGTGGCGAATACTGGTTTGATTaGGTTCCTCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VFILSPINNSNSHLKSCGEYWFD*VPQCLF
Trigger: GAAAAGGCATTGAGGAACTCAATCAAACCAGTATTC...GCCACATGATTTAAGGTGGCTGTTGGAATTGTTGATGGGTGACAAAATAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp ATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 4 (lower is better)
Translates to: IPLMFSSHRANQTYRYHTTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...TGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR TCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTGGGTGTTTAGGTTTCTaGTTTTTGGGAAACACTTTT +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSGCLGF*FLGNTF
Trigger: AAAAGTGTTTCCCAAAAATCAGAAACCTAAACACCC...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTAGTGCAAAGGACTCTTaGGGTCAGAAAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: FSSHRANQTYRYHTRKQSSAKDS*GQKSCI
Trigger: AATACAACTTTTCTGACCTCAAGAGTCCTTTGCACT...AGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR TCA 90 bp TCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGTGCAAAGGACTCTTaGGGTCAGAAAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: SAVLKEQVENIPLMFSSHSAKDS*GQKSCI
Trigger: AATACAACTTTTCTGACCTCAAGAGTCCTTTGCACT...ATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR TCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGGTTAGCATCATCTTCTaGGTCTGTAGAGTCAATCTT +
Preference number: 4 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRVSIIF*VCRVNL
Trigger: AAGATTGACTCTACAGACTCAGAAGATGATGCTAAC...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCGTTAGCATCATCTTCTaGGTCTGTAGAGTCAATCTT +
Preference number: 4 (lower is better)
Translates to: QLCSFERASRKYSADVLIVSIIF*VCRVNL
Trigger: AAGATTGACTCTACAGACTCAGAAGATGATGCTAAC...GATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR TCA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGAGCTCATACCTCTTCTaGCAACTTTTAGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLSSYLF*QLLVPS
Trigger: GGATGGAACTAAAAGTTGTCAGAAGAGGTATGAGCT...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTCTGATTGATTACATGTaGTTCCAGTTCTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTLIDYM*FQFWYL
Trigger: AAGGTACCAGAACTGGAATCACATGTAATCAATCAG...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TTCGTGACATATGTAAAACGCCAATGTGATGGCAATAATTCCTGTTGTTGGGTGAGGGGAAAATCACACTaGTTGATTACATGTGATTCC +
Preference number: 4 (lower is better)
Translates to: FVTYVKRQCDGNNSCCWVRGKSH*LITCDS
Trigger: GGAATCACATGTAATCAATCAGTGTGATTTTCCCCT...CACCCAACAACAGGAATTATTGCCATCACATTGGCGTTTTACATATGTCACGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486249.5
CDS-3UTR TCA 90 bp ACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAATATAGGGGAAAATCACACTaGTTGATTACATGTGATTCC +
Preference number: 4 (lower is better)
Translates to: TSSHNRDFPPAMFTVAKYRGKSH*LITCDS
Trigger: GGAATCACATGTAATCAATCAGTGTGATTTTCCCCT...ATATTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTTTACTTTATATCAATTaGACTTCAGCAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFILLYIN*TSAATL
Trigger: CAGTGTGGCTGCTGAAGTTCAATTGATATAAAGTAA...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTAAGCAGTTCATAAGCTaGTGTTCTGATAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSKQFIS*CSDNER
Trigger: CCTTTCATTATCAGAACAGCAGCTTATGAACTGCTT...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGCAAAAAGAGCTGCTCTaGAGTCACATTGTGATACGC +
Preference number: 4 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQQKELL*SHIVIR
Trigger: GCGTATCACAATGTGACTGCAGAGCAGCTCTTTTTG...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGCAAAAAGAGCTGCTCTaGAGTCACATTGTGATACGC +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGQKELL*SHIVIR
Trigger: GCGTATCACAATGTGACTGCAGAGCAGCTCTTTTTG...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGAAAACTGTGGGACTCTaGAAACATATGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRKTVGL*KHMLVF
Trigger: GAATACCAGCATATGTTTGCAGAGTCCCACAGTTTT...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTCTGGTACCTTCCTTTTaGACCTCAAAAAGTTATAAG +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSLVPSF*TSKSYK
Trigger: CTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAG...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTACAGCACTCAGGAATATaGCCACAAGATACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLQHSGI*PQDTLS
Trigger: TGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTTATTCATCAAAGACATaGTGGCATTCCCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSYSSKT*WHSHSS
Trigger: ACTACTATGGGAATGCCACCATGTCTTTGATGAATA...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTTATTCATCAAAGACATaGTGGCATTCCCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFIYSSKT*WHSHSS
Trigger: ACTACTATGGGAATGCCACCATGTCTTTGATGAATA...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTATTTCCAGAGCCAAGTaGTTTCGGCTTGCCACATCA +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVISRAK*FRLATS
Trigger: TGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAAT...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGTTGACTGGCTTGCATTaGATCAGATTCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGLTGLH*IRFSGA
Trigger: TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAA...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTTCAGTAATCAAGCCATaGTTTTCCAGTGTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTSVIKP*FSSVSQ
Trigger: TTGGGAAACACTGGAAAACCATGGCTTGATTACTGA...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp ACAGTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACTCTGCAAACATATGCTaGTATTCATGTCTAATCTGG +
Preference number: 4 (lower is better)
Translates to: TVFTEIKLVVMNHQAATDSANIC*YSCLIW
Trigger: CCAGATTAGACATGAATACCAGCATATGTTTGCAGA...GTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGGTGCAGGTTGTTACATaGGTATATTGTGTGATACTG +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLVQVVT*VYCVIL
Trigger: CAGTATCACACAATATACCCATGTAACAACCTGCAC...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486249.5
CDS-3UTR TCA 90 bp CAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATGAATACTGGTTTGATTaGGTTCCTCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QVENIPLMFSSHRANQTYEYWFD*VPQCLF
Trigger: GAAAAGGCATTGAGGAACTCAATCAAACCAGTATTC...ATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
CDS-3UTR TCA 90 bp TCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATCTGATGAAACCTGTGTaGAAAGAATACTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: SAVLKEQVENIPLMFSSHLMKPV*KEYWFD
Trigger: ATCAAACCAGTATTCTTTTCACACAGGTTTCATCAG...ATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
CDS-3UTR TCA 90 bp AAAAGAGCTGCTCTGCAGTCACATTGTGATACGCGTTCTTATTCATCAAAGACACTGATGAAACCTGTGTaGAAAGAATACTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: KRAALQSHCDTRSYSSKTLMKPV*KEYWFD
Trigger: ATCAAACCAGTATTCTTTTCACACAGGTTTCATCAG...TGTCTTTGATGAATAAGAACGCGTATCACAATGTGACTGCAGAGCAGCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR TCA 90 bp ACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAATATACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 4 (lower is better)
Translates to: TSSHNRDFPPAMFTVAKYTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...ATATTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp AACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 4 (lower is better)
Translates to: NSAVLKEQVENIPLMFSSTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...GGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR TCA 90 bp GTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGAGAGGAGTGCAAAGGACTCTTaGGGTCAGAAAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: VSEPNLMYFTLYTPSLERSAKDS*GQKSCI
Trigger: AATACAACTTTTCTGACCTCAAGAGTCCTTTGCACT...CCTCTCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGAGTGCAAAGGACTCTTaGGGTCAGAAAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLSAKDS*GQKSCI
Trigger: AATACAACTTTTCTGACCTCAAGAGTCCTTTGCACT...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGCTGATTGATTACATGTaGTTCCAGTTCTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLLIDYM*FQFWYL
Trigger: AAGGTACCAGAACTGGAATCACATGTAATCAATCAG...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTTTACTTTATATCAATTaGACTTCAGCAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTLLYIN*TSAATL
Trigger: CAGTGTGGCTGCTGAAGTTCAATTGATATAAAGTAA...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR GCA 90 bp TTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATAAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: FTEIKLVVMNHQAATDSIKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...TATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp GTGTTTATTTTGTCACCCATCAACAATTCCAACAGCCACCTTAAATCATGTGGCAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: VFILSPINNSNSHLKSCGKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...GCCACATGATTTAAGGTGGCTGTTGGAATTGTTGATGGGTGACAAAATAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR GCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTAAGCAGTTCATAAGCTaGTGTTCTGATAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTKQFIS*CSDNER
Trigger: CCTTTCATTATCAGAACAGCAGCTTATGAACTGCTT...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGAAGCAGTTCATAAGCTaGTGTTCTGATAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: QRDHNSAVLKEQVENIPLKQFIS*CSDNER
Trigger: CCTTTCATTATCAGAACAGCAGCTTATGAACTGCTT...CAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR GCA 90 bp TTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATAAAGCAGTTCATAAGCTaGTGTTCTGATAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: FTEIKLVVMNHQAATDSIKQFIS*CSDNER
Trigger: CCTTTCATTATCAGAACAGCAGCTTATGAACTGCTT...TATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR GCA 90 bp ACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAATATAAGCAGTTCATAAGCTaGTGTTCTGATAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: TSSHNRDFPPAMFTVAKYKQFIS*CSDNER
Trigger: CCTTTCATTATCAGAACAGCAGCTTATGAACTGCTT...ATATTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGTTTGATAAACAAGGCTaGATCTTATTTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: LMFSSHRANQTYRYHTRKFDKQG*ILFLRF
Trigger: GAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAA...CTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR CCA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCTCATCAAAGACATGGTaGCATTCCCATAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVSSKTW*HSHSSA
Trigger: TGCACTACTATGGGAATGCCACCATGTCTTTGATGA...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTTATTTGTAGGATTGACTaGCTTGCATTGGATCAGATT +
Preference number: 4 (lower is better)
Translates to: SHPIGQIKLIATIQGSNLICRID*LALDQI
Trigger: AATCTGATCCAATGCAAGCCAGTCAATCCTACAAAT...AAGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTATTTGTAGGATTGACTaGCTTGCATTGGATCAGATT +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTICRID*LALDQI
Trigger: AATCTGATCCAATGCAAGCCAGTCAATCCTACAAAT...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGAGGAATCAAAACTGTaGGACTCTGCAAACATATGC +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGEESKL*DSANIC
Trigger: GCATATGTTTGCAGAGTCCCACAGTTTTGATTCCTC...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATAAAAGAATACTGGTTTaGTTGAGTTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: QVENIPLMFSSHRANQTYKRILV*LSSSMP
Trigger: AGGCATTGAGGAACTCAATCAAACCAGTATTCTTTT...ATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
CDS-3UTR TCA 90 bp CAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCTGATGAAACCTGTGTaGAAAGAATACTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: QVENIPLMFSSHRANQTYLMKPV*KEYWFD
Trigger: ATCAAACCAGTATTCTTTTCACACAGGTTTCATCAG...ATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
CDS-3UTR TCA 90 bp TTTATTTTGTCACCCATCAACAATTCCAACAGCCACCTTAAATCATGTGGCTTAAGTGCAAAGGACTCTTaGGGTCAGAAAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: FILSPINNSNSHLKSCGLSAKDS*GQKSCI
Trigger: AATACAACTTTTCTGACCTCAAGAGTCCTTTGCACT...TAAGCCACATGATTTAAGGTGGCTGTTGGAATTGTTGATGGGTGACAAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR TCA 90 bp ACTCATCAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTTCTGCAGTCACATTGTaGTACGCGTTCTTATTCATC +
Preference number: 4 (lower is better)
Translates to: THQRDHNSAVLKEQVENISAVTL*YAFLFI
Trigger: GATGAATAAGAACGCGTATCACAATGTGACTGCAGA...AATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR TCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGTTAGCATCATCTTCTaGGTCTGTAGAGTCAATCTT +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGVSIIF*VCRVNL
Trigger: AAGATTGACTCTACAGACTCAGAAGATGATGCTAAC...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGGGCAAGCTTTCCATCTaGAGATTAGCTTTAATCATG +
Preference number: 4 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQGKLSI*RLALIM
Trigger: CATGATTAAAGCTAATCTTCAGATGGAAAGCTTGCC...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp ACTCATCAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTAGCTCATACCTCTTCTaGCAACTTTTAGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: THQRDHNSAVLKEQVENISSYLF*QLLVPS
Trigger: GGATGGAACTAAAAGTTGTCAGAAGAGGTATGAGCT...AATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGACCGCATTCTGTTTCTaGGCCAAATCTAATGTATTT +
Preference number: 4 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLTAFCF*AKSNVF
Trigger: AAATACATTAGATTTGGCTCAGAAACAGAATGCGGT...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp AGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTCGTTCCCCATAATATaGAATGCAGTACATAATAGA +
Preference number: 4 (lower is better)
Translates to: RDHNSAVLKEQVENIPLMSFPII*NAVHNR
Trigger: TCTATTATGTACTGCATTGCATATTATGGGGAACGA...CATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR GCA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGAAGCAGTTCATAAGCTaGTGTTCTGATAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLKQFIS*CSDNER
Trigger: CCTTTCATTATCAGAACAGCAGCTTATGAACTGCTT...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TGGGACTCTGCAAACATATGCTGGTATTCATGTCTAATCTGGGTTAGATCAACTTTTGATAAACAAGGCTaGATCTTATTTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: WDSANICWYSCLIWVRSTFDKQG*ILFLRF
Trigger: GAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAA...AGTTGATCTAACCCAGATTAGACATGAATACCAGCATATGTTTGCAGAGTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTTTTTGATAAACAAGGCTaGATCTTATTTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: SHPIGQIKLIATIQGSNLFDKQG*ILFLRF
Trigger: GAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAA...AAGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR CCA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCTCAGTAATCAAGCCATaGTTTTCCAGTGTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVSVIKP*FSSVSQ
Trigger: TTGGGAAACACTGGAAAACCATGGCTTGATTACTGA...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp ACTCATCAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTGAATACTGGTTTGATTaGGTTCCTCAATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: THQRDHNSAVLKEQVENIEYWFD*VPQCLF
Trigger: GAAAAGGCATTGAGGAACTCAATCAAACCAGTATTC...AATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
CDS-3UTR TCA 90 bp TCATGTCACAGTAGGTTCCAGAAGGGTCTGTTTGTTCATTTAAATTTTCTTTGCAAAAGAATACTGGTTTaGTTGAGTTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SCHSRFQKGLFVHLNFLCKRILV*LSSSMP
Trigger: AGGCATTGAGGAACTCAATCAAACCAGTATTCTTTT...GCAAAGAAAATTTAAATGAACAAACAGACCCTTCTGGAACCTACTGTGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR TCA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATA +
Preference number: 4 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVTTLQF*KSKSKI
Trigger: TATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGT...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCGGGTGTTTAGGTTTCTaGTTTTTGGGAAACACTTTT +
Preference number: 4 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVGCLGF*FLGNTF
Trigger: AAAAGTGTTTCCCAAAAATCAGAAACCTAAACACCC...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTTAGCATCATCTTCTaGGTCTGTAGAGTCAATCTT +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVVSIIF*VCRVNL
Trigger: AAGATTGACTCTACAGACTCAGAAGATGATGCTAAC...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGACCGCATTCTGTTTCTaGGCCAAATCTAATGTATTT +
Preference number: 4 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQTAFCF*AKSNVF
Trigger: AAATACATTAGATTTGGCTCAGAAACAGAATGCGGT...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp TTTTGTCAAACTCATCAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCACCGCATTCTGTTTCTaGGCCAAATCTAATGTATTT +
Preference number: 4 (lower is better)
Translates to: FCQTHQRDHNSAVLKEQVTAFCF*AKSNVF
Trigger: AAATACATTAGATTTGGCTCAGAAACAGAATGCGGT...GACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGTTTGACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486249.5
CDS-3UTR TCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAAGGGGAAAATCACACTaGTTGATTACATGTGATTCC +
Preference number: 4 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLRGKSH*LITCDS
Trigger: GGAATCACATGTAATCAATCAGTGTGATTTTCCCCT...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGCTGGTACCTTCCTTTTaGACCTCAAAAAGTTATAAG +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGLVPSF*TSKSYK
Trigger: CTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAG...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp GTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGAGAGGTTTGATAAACAAGGCTaGATCTTATTTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: VSEPNLMYFTLYTPSLERFDKQG*ILFLRF
Trigger: GAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAA...CCTCTCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGTATTCATCAAAGACATaGTGGCATTCCCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGYSSKT*WHSHSS
Trigger: ACTACTATGGGAATGCCACCATGTCTTTGATGAATA...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCATTTGTAGGATTGACTaGCTTGCATTGGATCAGATT +
Preference number: 4 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVICRID*LALDQI
Trigger: AATCTGATCCAATGCAAGCCAGTCAATCCTACAAAT...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TTTTGTCAAACTCATCAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCATTTGTAGGATTGACTaGCTTGCATTGGATCAGATT +
Preference number: 4 (lower is better)
Translates to: FCQTHQRDHNSAVLKEQVICRID*LALDQI
Trigger: AATCTGATCCAATGCAAGCCAGTCAATCCTACAAAT...GACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGTTTGACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486249.5
CDS-3UTR CCA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGTGCAGGTTGTTACATaGGTATATTGTGTGATACTG +
Preference number: 4 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLVQVVT*VYCVIL
Trigger: CAGTATCACACAATATACCCATGTAACAACCTGCAC...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR TCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTAAAAGAATACTGGTTTaGTTGAGTTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVKRILV*LSSSMP
Trigger: AGGCATTGAGGAACTCAATCAAACCAGTATTCTTTT...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR TCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTTTACTTTATATCAATTaGACTTCAGCAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVLLYIN*TSAATL
Trigger: CAGTGTGGCTGCTGAAGTTCAATTGATATAAAGTAA...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR GCA 90 bp ACTCATCAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: THQRDHNSAVLKEQVENIKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...AATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
ENST00000497621.5
CDS-3UTR GCA 90 bp CTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTAAGAGATCACAACTCTaGAGTTTTGAAAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LHCTKLLFTIMVHLILGVKRSQL*SFERAS
Trigger: ACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTT...AACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CCA 90 bp TCATGTCACAGTAGGTTCCAGAAGGGTCTGTTTGTTCATTTAAATTTTCTTTGCTTTGATAAACAAGGCTaGATCTTATTTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: SCHSRFQKGLFVHLNFLCFDKQG*ILFLRF
Trigger: GAAACGGAGAAATAAGATCCAGCCTTGTTTATCAAA...GCAAAGAAAATTTAAATGAACAAACAGACCCTTCTGGAACCTACTGTGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS GCA 90 bp CGACGACCGCAGAGGCGCACCGGGCTCCGAGACCTGAGGGGCCGCTaGTCCAGCCGGCTGCTGCCTCTCTCGCGGCGCCTGCCACATCGG +
Preference number: 5 (lower is better)
Translates to: RRPQRRTGLRDLRGR*SSRLLPLSRRLPHR
Trigger: CCGATGTGGCAGGCGCCGCGAGAGAGGCAGCAGCCGGCTGGAGCAGCGGCCCCTCAGGTCTCGGAGCCCGGTGCGCCTCTGCGGTCGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000480133.1
ENST00000497621.5
ENST00000613264.4
CDS CCA 90 bp ACATCGGGCCGCAGAAGCCCGAGGCCGGCAGAAACCAAAGGAAGGTaGCGCGGGCCAGGGGCGGCGCGGGCACGATTCCTTCCCCGCGGA +
Preference number: 5 (lower is better)
Translates to: TSGRRSPRPAETKGR*RGPGAARARFLPRG
Trigger: TCCGCGGGGAAGGAATCGTGCCCGCGCCGCCCCTGGCCCGCGCCACCTTCCTTTGGTTTCTGCCGGCCTCGGGCTTCTGCGGCCCGATGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000480133.1
ENST00000497621.5
ENST00000613264.4
CDS TCA 90 bp GTACTCCCCTTCCCCGCCCGGCTGGCAGGCGGCAGAAGTAAACACTaGGGCTTGTGGCGCCGCGGACTGACTGTGACACAAGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VLPFPARLAGGRSKH*GLWRRGLTVTQGSA
Trigger: TGCTGAGCCTTGTGTCACAGTCAGTCCGCGGCGCCACAAGCCTCAGTGTTTACTTCTGCCGCCTGCCAGCCGGGCGGGGAAGGGGAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265261.10
ENST00000489112.5
CDS GCA 90 bp AATATGGCCACAAGATACCCTCTCATGGCTGGCTCACCCGGGCAGTaGAAACCCGCAGCGAAGCCGGCCGGCAAGAGTGACCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: NMATRYPLMAGSPGQ*KPAAKPAGKSDPPR
Trigger: CCTCGGCGGGTCACTCTTGCCGGCCGGCTTCGCTGCGGGTTTGCACTGCCCGGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS GCA 90 bp AAAACCCAGGGTTGTGCTGCTTCCTCACTTGCAAATGCCGGGCAGTaGAAACCCGCAGCGAAGCCGGCCGGCAAGAGTGACCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: KTQGCAASSLANAGQ*KPAAKPAGKSDPPR
Trigger: CCTCGGCGGGTCACTCTTGCCGGCCGGCTTCGCTGCGGGTTTGCACTGCCCGGCATTTGCAAGTGAGGAAGCAGCACAACCCTGGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR CAA 90 bp TTGGTAAGGACTTGGGGGCGGGGAGGGCTGTCCAGCAGATGCTCCTTCAGTGTGCAGGTTGGTAAGGACTaGGGGGCGGGGAGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LVRTWGRGGLSSRCSFSVQVGKD*GAGRAV
Trigger: GACAGCCCTCCCCGCCCCCAAGTCCTTACCAACCTG...CACACTGAAGGAGCATCTGCTGGACAGCCCTCCCCGCCCCCAAGTCCTTACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS GCA 90 bp GATCTTATTTCTCCGTTTCATTTCCACAGGTGCCACCCCGGGCAGTaGAAACCCGCAGCGAAGCCGGCCGGCAAGAGTGACCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: DLISPFHFHRCHPGQ*KPAAKPAGKSDPPR
Trigger: CCTCGGCGGGTCACTCTTGCCGGCCGGCTTCGCTGCGGGTTTGCACTGCCCGGGGTGGCACCTGTGGAAATGAAACGGAGAAATAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480133.1
CDS CCA 90 bp GAAGACAGCACTCAGGAATATGGCCACAAGATACCCTCTCATGGCTaGCTCACCCGGGCAGTGCAAACCCGCAGCGAAGCCGGCCGGCAA +
Preference number: 5 (lower is better)
Translates to: EDSTQEYGHKIPSHG*LTRAVQTRSEAGRQ
Trigger: TTGCCGGCCGGCTTCGCTGCGGGTTTGCACTGCCCGGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS CCA 90 bp AGAGGAAGACAGCACTCAGGAATATGGCCACAAGATACCCTCTCATaGCTGGCTCACCCGGGCAGTGCAAACCCGCAGCGAAGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: RGRQHSGIWPQDTLS*LAHPGSANPQRSRP
Trigger: CGGCCGGCTTCGCTGCGGGTTTGCACTGCCCGGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS TCA 90 bp CTCTCATGGCTGGCTCACCTCCATACCTTTACCAGGTGGCCCTGCTaGCACCTGTGTCCATTCAGCCCCTGGACAGGCCGTCATCCATCC +
Preference number: 5 (lower is better)
Translates to: LSWLAHLHTFTRWPC*HLCPFSPWTGRHPS
Trigger: GGATGGATGACGGCCTGTCCAGGGGCTGAATGGACACAGGTGTCAGCAGGGCCACCTGGTAAAGGTATGGAGGTGAGCCAGCCATGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485391.5
ENST00000495376.5
CDS CCA 90 bp GACCGGAAAATCACCGCGAAGGGAGGGACGAGGAAAGGCGGCGGGTaGCTTCAGGACAAGGTAGGAGGATCGATTTCCACAGCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: DRKITAKGGTRKGGG*LQDKVGGSISTAKK
Trigger: CTTCTTGGCTGTGGAAATCGATCCTCCTACCTTGTCCTGAAGCCACCCGCCGCCTTTCCTCGTCCCTCCCTTCGCGGTGATTTTCCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000460774.5
ENST00000462152.5
ENST00000466482.5
ENST00000469105.5
ENST00000483910.5
ENST00000489112.5
CDS TCA 90 bp TCTGCTGACGCACACCGGCAGCGAACACCACAGAAACACCTGACCTaGACAGGTTCCATAGACCCTTGCCTTGGGATCCGGGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: SADAHRQRTPQKHLT*TGSIDPCLGIRGTL
Trigger: TAGAGTCCCCCGGATCCCAAGGCAAGGGTCTATGGAACCTGTTCAGGTCAGGTGTTTCTGTGGTGTTCGCTGCCGGTGTGCGTCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477574.5
CDS-3UTR CAA 90 bp GCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATAGTCTTTCAGCCCTaGCCCTCCCCGCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: AKWFRLATSSHNRDFPPAIVFQP*PSPLPS
Trigger: CGAGGGGAGCGGGGAGGGCAAGGGCTGAAAGACTAT...GGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGATAGTCTTTCAGCCCTaGCCCTCCCCGCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQIVFQP*PSPLPS
Trigger: CGAGGGGAGCGGGGAGGGCAAGGGCTGAAAGACTAT...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS CCA 90 bp AGAGGAAGACAGCACTCAGGAATATGGCCACAAGATACCCTCTCATaGCTGGCTCACCTTTACCAGGTGGCCCTGCTGACACCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: RGRQHSGIWPQDTLS*LAHLYQVALLTPVS
Trigger: GGACACAGGTGTCAGCAGGGCCACCTGGTAAAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468553.5
ENST00000476833.5
ENST00000490684.1
ENST00000492254.5
CDS GCA 90 bp TGTGTCCATTCAGCCCCTGGACAGGCCGTCATCCATCCTAGTCTCTaGTGGTCTTCAGCTCACACTGACATACACTCCAGACTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: CVHSAPGQAVIHPSL*WSSAHTDIHSRLCG
Trigger: TCCACACAGTCTGGAGTGTATGTCAGTGTGAGCTGAAGACCAGCAGAGACTAGGATGGATGACGGCCTGTCCAGGGGCTGAATGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS CCA 90 bp GAAGACAGCACTCAGGAATATGGCCACAAGATACCCTCTCATGGCTaGCTCACCTCCATACCTTTACCAGGTGGCCCTGCTGACACCTGT +
Preference number: 5 (lower is better)
Translates to: EDSTQEYGHKIPSHG*LTSIPLPGGPADTC
Trigger: ACAGGTGTCAGCAGGGCCACCTGGTAAAGGTATGGAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485391.5
ENST00000495376.5
CDS GCA 90 bp TTGATTTCTCCTTACTGGGACCGGGCAGGTAACTCACGTGGTCTTTaGATCTCATTTCTATCAGAGGGATGTCGCTCCCCTACAGGGGGC +
Preference number: 5 (lower is better)
Translates to: LISPYWDRAGNSRGL*ISFLSEGCRSPTGG
Trigger: GCCCCCTGTAGGGGAGCGACATCCCTCTGATAGAAATGAGATGCAAAGACCACGTGAGTTACCTGCCCGGTCCCAGTAAGGAGAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491912.1
CDS CCA 90 bp AGGGACCAGGCTGCCAAAGACTCAGGACGCTGCCTGCTGAATTGCTaGGGCCTCTCTGTTAGAAATTATCTAAAACCCAGGGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: RDQAAKDSGRCLLNC*GLSVRNYLKPRVVL
Trigger: CAGCACAACCCTGGGTTTTAGATAATTTCTAACAGAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000465004.1
ENST00000489112.5
ENST00000497621.5
CDS-3UTR CAA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCAATAGTCTTTCAGCCCTaGCCCTCCCCGCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGAIVFQP*PSPLPS
Trigger: CGAGGGGAGCGGGGAGGGCAAGGGCTGAAAGACTAT...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS GCA 90 bp AAGAGGGACCAGGCTGCCAAAGACTCAGGACGCTGCCTGCTGAATTaGTGGGGCCTCTCTGTTAGAAATTATCTAAAACCCAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: KRDQAAKDSGRCLLN*WGLSVRNYLKPRVV
Trigger: CACAACCCTGGGTTTTAGATAATTTCTAACAGAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000465004.1
ENST00000489112.5
ENST00000497621.5
CDS-3UTR CAA 90 bp AGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTCCATCCCGCCCTGGTTaGTTTGGAAAGCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: RFPEPSGFGLPHQATIVIPSRPG*FGKLQE
Trigger: CTCCTGCAGCTTTCCAAACAAACCAGGGCGGGATGG...AATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
CDS-3UTR CAA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCACCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS CCA 90 bp ATATGCAATGCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCCGGAGTCTCAGGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: ICNAVHNRGRQHSGI*PQDTLSWPESQAPA
Trigger: GGCGGGAGCCTGAGACTCCGGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGCATTGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486334.6
CDS-3UTR CAA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGCCATCCCGCCCTGGTTaGTTTGGAAAGCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LAHHICRIDWLALDQILWPSRPG*FGKLQE
Trigger: CTCCTGCAGCTTTCCAAACAAACCAGGGCGGGATGG...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265261.10
ENST00000469105.5
CDS-3UTR CAA 90 bp ATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAATAGTCTTTCAGCCCTaGCCCTCCCCGCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: IPLMFSSHRANQTYRYHTIVFQP*PSPLPS
Trigger: CGAGGGGAGCGGGGAGGGCAAGGGCTGAAAGACTAT...TGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486249.5
CDS CCA 90 bp ATATGCAATGCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCTGGCTCACCTTTCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: ICNAVHNRGRQHSGI*PQDTLSWLAHLSGG
Trigger: CCCGCCCGAAAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGCATTGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265261.10
ENST00000460774.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497008.5
CDS CCA 90 bp ATATGCAATGCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCTGGCTCACCCGGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: ICNAVHNRGRQHSGI*PQDTLSWLAHPGSA
Trigger: TGCACTGCCCGGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGCATTGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS-3UTR CAA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCACTGCCCGGCCTCAGCTaGACTTTTCTTAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPLPGLS*TFLKCL
Trigger: TAAACACTTAAGAAAAGTCAAGCTGAGGCCGGGCAG...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS GCA 90 bp GAGAATTTGCGAAAGAGGGACCAGGCTGCCAAAGACTCAGGACGCTaGCTGCTGAATTGCTGGGGCCTCTCTGTTAGAAATTATCTAAAA +
Preference number: 5 (lower is better)
Translates to: ENLRKRDQAAKDSGR*LLNCWGLSVRNYLK
Trigger: TTTTAGATAATTTCTAACAGAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCGCAAATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000465004.1
ENST00000489112.5
ENST00000497621.5
CDS GCA 90 bp TTGATTTCTCCTTACTGGGACCGGGCAGGTAACTCACGTGGTCTTTaGATCTCATTTCTATCAGAGGGATGTCGCTCCCCATTTTTACCC +
Preference number: 5 (lower is better)
Translates to: LISPYWDRAGNSRGL*ISFLSEGCRSPFLP
Trigger: GGGTAAAAATGGGGAGCGACATCCCTCTGATAGAAATGAGATGCAAAGACCACGTGAGTTACCTGCCCGGTCCCAGTAAGGAGAAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495502.1
CDS-3UTR CAA 90 bp CTGTCCAGCAGATGCTCCTTCAGTGTGTGCCTGAAACCTCGCCTTGTGGACACAGAAAAGAATACTGGTTaGATTGAGTTCCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: LSSRCSFSVCLKPRLVDTEKNTG*IEFLNA
Trigger: GGCATTGAGGAACTCAATCAAACCAGTATTCTTTTC...TGTGTCCACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCATCTGCTGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR CAA 90 bp CTGTCCAGCAGGCGGAAGCCTCATGGTCCTGGGCTCTCTGTTTTTGTCAAACTCCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: LSSRRKPHGPGLSVFVKLHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...GAGTTTGACAAAAACAGAGAGCCCAGGACCATGAGGCTTCCGCCTGCTGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR CAA 90 bp GTCCAGCAGATGCTCCTTCAGTGTGTGCCTGAAACCTCGCCTTGTGGACACATCCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: VQQMLLQCVPETSPCGHIHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...GATGTGTCCACAAGGCGAGGTTTCAGGCACACACTGAAGGAGCATCTGCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495376.5
CDS-3UTR CAA 90 bp GAACTCCTGAGTTCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGCCATTAGTGTTTATTTaGTCACCCATCAACAATTCC +
Preference number: 5 (lower is better)
Translates to: ELLSSGNPAASLGLPKCLPLVFI*SPINNS
Trigger: GGAATTGTTGATGGGTGACAAAATAAACACTAATGG...CAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGAACTCAGGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACTCTTGAGGTCAGACCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: HQRHGGIPIVVQRTLEVRPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...TCTGACCTCAAGAGTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CAA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: EGRLAHHICRIDWLALDQPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTGACTGGCTTGCATaGGATCAGATTCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: LRFPEPSGFGLPHQATIVIDWLA*DQILWC
Trigger: GCACCAGAGAATCTGATCCAATGCAAGCCAGTCAAT...CACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACGTAGGATTGACTGGCTaGCATTGGATCAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHVGLTG*HWIRFS
Trigger: AGAGAATCTGATCCAATGCAAGCCAGTCAATCCTAC...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACACCACATTTGTAGGATaGACTGGCTTGCATTGGATC +
Preference number: 5 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHTTFVG*TGLHWI
Trigger: GATCCAATGCAAGCCAGTCAATCCTACAAATGTGGT...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp ATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGCTACTGGAAGTCCTaGCTGTCCAGCAGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: IPLMFSSHRANQTYRYHTSYWKS*LSSRRK
Trigger: CTTCCGCCTGCTGGACAGCAAGGACTTCCAGTAGCT...TGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR CAA 90 bp TCAGGCAATCCAGCTGCCTCCCTCGGCCTCCCAAAGTGTTTGTTAGGATTACAGGAAAAGAATACTGGTTaGATTGAGTTCCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: SGNPAASLGLPKCLLGLQEKNTG*IEFLNA
Trigger: GGCATTGAGGAACTCAATCAAACCAGTATTCTTTTC...CTGTAATCCTAACAAACACTTTGGGAGGCCGAGGGAGGCAGCTGGATTGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CAA 90 bp AGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTATTGACTGGCTTGCATaGGATCAGATTCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RFPEPSGFGLPHQATIVIIDWLA*DQILWC
Trigger: GCACCAGAGAATCTGATCCAATGCAAGCCAGTCAAT...AATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp ACGCGTTCTTATTCATCAAAGACATGGTGGCATTCCCATAGTAGTGCAAAGGACGCAAAGGTGGAGAATTaGCGAAAGAGGGACCAGGCT +
Preference number: 5 (lower is better)
Translates to: TRSYSSKTWWHSHSSAKDAKVEN*RKRDQA
Trigger: AGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGC...GTCCTTTGCACTACTATGGGAATGCCACCATGTCTTTGATGAATAAGAACGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497621.5
CDS CCA 90 bp ATATGCAATGCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCTGGCTCACCTTTACCAGGTG +
Preference number: 5 (lower is better)
Translates to: ICNAVHNRGRQHSGI*PQDTLSWLAHLYQV
Trigger: CACCTGGTAAAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGCATTGCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468553.5
ENST00000476833.5
ENST00000490684.1
ENST00000492254.5
CDS-3UTR CAA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGCCATCCCGCCCTGGTTaGTTTGGAAAGCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLPSRPG*FGKLQE
Trigger: CTCCTGCAGCTTTCCAAACAAACCAGGGCGGGATGG...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000483910.5
CDS-3UTR CAA 90 bp CCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCAGAAAAGAATACTGGTTaGATTGAGTTCCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: PSGFGLPHQATIVIFHQPEKNTG*IEFLNA
Trigger: GGCATTGAGGAACTCAATCAAACCAGTATTCTTTTC...TGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265261.10
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CAA 90 bp GAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: EPSGFGLPHQATIVIFHQHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...CTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFIPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCACTGCCCGGCCTCAGCTaGACTTTTCTTAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGALPGLS*TFLKCL
Trigger: TAAACACTTAAGAAAAGTCAAGCTGAGGCCGGGCAG...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGGTGCTGCTTCCTCACTaGCAAATGCCGGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLVLLPH*QMPGSA
Trigger: TGCACTGCCCGGCATTTGCAAGTGAGGAAGCAGCAC...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS CCA 90 bp ATATGCAATGCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCTGGCTCACCTCCATACCTTT +
Preference number: 5 (lower is better)
Translates to: ICNAVHNRGRQHSGI*PQDTLSWLAHLHTF
Trigger: AAAGGTATGGAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGCATTGCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485391.5
ENST00000495376.5
CDS CCA 90 bp AGTCATTCTCTGGCCCAGGTGAACTCCCCGACACTGTTAGAACAATaGCATTACTCTTCAGTTCTCACCATTTTTACCCTTCTGCAAAGT +
Preference number: 5 (lower is better)
Translates to: SHSLAQVNSPTLLEQ*HYSSVLTIFTLLQS
Trigger: ACTTTGCAGAAGGGTAAAAATGGTGAGAACTGAAGAGTAATGCCATTGTTCTAACAGTGTCGGGGAGTTCACCTGGGCCAGAGAATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491912.1
CDS-3UTR CAA 90 bp CCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCCATTAGTGTTTATTTaGTCACCCATCAACAATTCC +
Preference number: 5 (lower is better)
Translates to: PEPSGFGLPHQATIVIFHPLVFI*SPINNS
Trigger: GGAATTGTTGATGGGTGACAAAATAAACACTAATGG...GTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGTCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 5 (lower is better)
Translates to: LRFPEPSGFGLPHQATIVSVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...CACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: FSSHRANQTYRYHTRKQSPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...AGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CAA 90 bp TCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATCCAAGTGGTTTCGGCTaGCCACATCAAGCCACAATC +
Preference number: 5 (lower is better)
Translates to: SAVLKEQVENIPLMFSSHPSGFG*PHQATI
Trigger: GATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGG...ATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CAA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTTTTTCCTTCTTGAGCTaGCCTAGCTTAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSFSFLS*PSLASL
Trigger: CAGTGAAGCTAAGCTAGGCAAGCTCAAGAAGGAAAA...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGACCACATTTGTAGGATaGACTGGCTTGCATTGGATC +
Preference number: 5 (lower is better)
Translates to: EGRLAHHICRIDWLALDQTTFVG*TGLHWI
Trigger: GATCCAATGCAAGCCAGTCAATCCTACAAATGTGGT...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp AGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGCCACAATCGTGATTTCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 5 (lower is better)
Translates to: RFPEPSGFGLPHQATIVISVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...AATCACGATTGTGGCTTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp ATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAATTGACTGGCTTGCATaGGATCAGATTCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: IPLMFSSHRANQTYRYHTIDWLA*DQILWC
Trigger: GCACCAGAGAATCTGATCCAATGCAAGCCAGTCAAT...TGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CAA 90 bp AACCAGTATGAACTTAGATTTCCAGAGCCAAGTGGTTTCGGCTTGCCACATCAAGTAGGATTGACTGGCTaGCATTGGATCAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: NQYELRFPEPSGFGLPHQVGLTG*HWIRFS
Trigger: AGAGAATCTGATCCAATGCAAGCCAGTCAATCCTAC...TTGATGTGGCAAGCCGAAACCACTTGGCTCTGGAAATCTAAGTTCATACTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGTGCTGCTTCCTCACTaGCAAATGCCGGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLVLLPH*QMPGSA
Trigger: TGCACTGCCCGGCATTTGCAAGTGAGGAAGCAGCAC...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394162.5
CDS-3UTR CAA 90 bp GAAGGAAGACTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: EGRLAHHICRIDWLALDQHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...CTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAGTCTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTTCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 5 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSSVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CTAGCTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 5 (lower is better)
Translates to: LAHHICRIDWLALDQILWSVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...CCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp GTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTTTTTCCTTCTTGAGCTaGCCTAGCTTAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: VFTEIKLVVMNHQAATDSFSFLS*PSLASL
Trigger: CAGTGAAGCTAAGCTAGGCAAGCTCAAGAAGGAAAA...ACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACTGCCCGGCCTCAGCTaGACTTTTCTTAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: FTEIKLVVMNHQAATDSILPGLS*TFLKCL
Trigger: TAAACACTTAAGAAAAGTCAAGCTGAGGCCGGGCAG...TATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp GTGTTTATTTTGTCACCCATCAACAATTCCAACAGCCACCTTAAATCATGTGGCATTGACTGGCTTGCATaGGATCAGATTCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VFILSPINNSNSHLKSCGIDWLA*DQILWC
Trigger: GCACCAGAGAATCTGATCCAATGCAAGCCAGTCAAT...GCCACATGATTTAAGGTGGCTGTTGGAATTGTTGATGGGTGACAAAATAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CAA 90 bp ACAGTATTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACGTAGGATTGACTGGCTaGCATTGGATCAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: TVFTEIKLVVMNHQAATDVGLTG*HWIRFS
Trigger: AGAGAATCTGATCCAATGCAAGCCAGTCAATCCTAC...GTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAATACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TGTTTCTTCACCTCTCATTCCCCTACCTCCAGATGGCCTTTGGTTACATTTATTACCACATTTGTAGGATaGACTGGCTTGCATTGGATC +
Preference number: 5 (lower is better)
Translates to: CFFTSHSPTSRWPLVTFITTFVG*TGLHWI
Trigger: GATCCAATGCAAGCCAGTCAATCCTACAAATGTGGT...AATAAATGTAACCAAAGGCCATCTGGAGGTAGGGGAATGAGAGGTGAAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGGCAAAGGTGGAGAATTaGCGAAAGAGGGACCAGGCT +
Preference number: 5 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQAKVEN*RKRDQA
Trigger: AGCCTGGTCCCTCTTTCGCAAATTCTCCACCTTTGC...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS-3UTR CAA 90 bp AACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCTTAGCTATAGCAGCCTaGCTTCTGAAAGTGACTGGG +
Preference number: 5 (lower is better)
Translates to: NSAVLKEQVENIPLMFSSLAIAA*LLKVTG
Trigger: CCCAGTCACTTTCAGAAGCAAGGCTGCTATAGCTAA...GGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS TCA 90 bp GAAGTTGTATCAGCTATGACAAGTCTGGGGTCACTATCCCATAAATaGCAGCTGAAATCCACACCCAAGCCTAATTATAAGGGAAGATGT +
Preference number: 5 (lower is better)
Translates to: EVVSAMTSLGSLSHK*QLKSTPKPNYKGRC
Trigger: ACATCTTCCCTTATAATTAGGCTTGGGTGTGGATTTCAGCTGTCATTTATGGGATAGTGACCCCAGACTTGTCATAGCTGATACAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474595.1
CDS GCA 90 bp ACAGGGTATGCTCCATATAGGACTCTGCATTTGTGTTTTACATTATaGAGGTCTACATTCTTTGCCAGCATTACCCACTCCTCGAAGATT +
Preference number: 5 (lower is better)
Translates to: TGYAPYRTLHLCFTL*RSTFFASITHSSKI
Trigger: AATCTTCGAGGAGTGGGTAATGCTGGCAAAGAATGTAGACCTGCATAATGTAAAACACAAATGCAGAGTCCTATATGGAGCATACCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493953.1
CDS-3UTR CAA 90 bp ACCCTCTTTAGAGAGGCAGGTTGGTTGTCAGTAATCAAGCCATGGTTTTCCAGTTTGAGGTCAGAAAAGTaGTATTTAAAACCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: TLFREAGWLSVIKPWFSSLRSEK*YLKPAR
Trigger: CCTAGCTGGTTTTAAATACAACTTTTCTGACCTCAA...ACTGGAAAACCATGGCTTGATTACTGACAACCAACCTGCCTCTCTAAAGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TTTCGGCTTGCCACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACATTGAGGTCAGAAAAGTaGTATTTAAAACCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: FRLATSSHNRDFPPAMFTLRSEK*YLKPAR
Trigger: CCTAGCTGGTTTTAAATACAACTTTTCTGACCTCAA...TGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGTGGCAAGCCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGTTTTCCTTCTTGAGCTaGCCTAGCTTAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRFSFLS*PSLASL
Trigger: CAGTGAAGCTAAGCTAGGCAAGCTCAAGAAGGAAAA...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp GTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGAGAGGATTGACTGGCTTGCATaGGATCAGATTCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VSEPNLMYFTLYTPSLERIDWLA*DQILWC
Trigger: GCACCAGAGAATCTGATCCAATGCAAGCCAGTCAAT...CCTCTCTAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CTCACCACATTTGTAGGATTGACTGGCTTGCATTGGATCAGATTCTCTGGTGCATGTTACATGGGTATATaGTGTGATACTGAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: LTTFVGLTGLHWIRFSGACYMGI*CDTEVC
Trigger: ACAAACCTCAGTATCACACAATATACCCATGTAACA...TGCACCAGAGAATCTGATCCAATGCAAGCCAGTCAATCCTACAAATGTGGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp ATTCTTCAAAACTCCTCCATTACCAACCACCACACACTTTTTACAGGGTATGTTTTTTCCTTCTTGAGCTaGCCTAGCTTAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: ILQNSSITNHHTLFTGYVFSFLS*PSLASL
Trigger: CAGTGAAGCTAAGCTAGGCAAGCTCAAGAAGGAAAA...AACATACCCTGTAAAAAGTGTGTGGTGGTTGGTAATGGAGGAGTTTTGAAGAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000469105.5
CDS-3UTR CAA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGCTGCCCGGCCTCAGCTaGACTTTTCTTAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQLPGLS*TFLKCL
Trigger: TAAACACTTAAGAAAAGTCAAGCTGAGGCCGGGCAG...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATACCACATTTGTAGGATaGACTGGCTTGCATTGGATC +
Preference number: 5 (lower is better)
Translates to: QVENIPLMFSSHRANQTYTTFVG*TGLHWI
Trigger: GATCCAATGCAAGCCAGTCAATCCTACAAATGTGGT...ATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CAA 90 bp AACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCTGGGCTCTCTGTTTTaGTCAAACTCATCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: NSAVLKEQVENIPLMFSSLGSLF*SNSSKR
Trigger: TCTCTTTGATGAGTTTGACAAAAACAGAGAGCCCAG...GGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476833.5
CDS-3UTR CAA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGGCAAAAGCTGGCTTaGATAAACAAGGCTGGATCT +
Preference number: 5 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVRQKLA*INKAGS
Trigger: AGATCCAGCCTTGTTTATCAAAGCCAGCTTTTGCCT...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGAGGCAAAAGCTGGCTTaGATAAACAAGGCTGGATCT +
Preference number: 5 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGRQKLA*INKAGS
Trigger: AGATCCAGCCTTGTTTATCAAAGCCAGCTTTTGCCT...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTTGAAAAGAATACTGGTTaGATTGAGTTCCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: SHPIGQIKLIATIQGSNLEKNTG*IEFLNA
Trigger: GGCATTGAGGAACTCAATCAAACCAGTATTCTTTTC...AAGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469105.5
ENST00000476833.5
ENST00000486249.5
ENST00000495376.5
CDS-3UTR CAA 90 bp TTCGTGACATATGTAAAACGCCAATGTGATGGCAATAATTCCTGTTGTTGGGTGGAAAAGAATACTGGTTaGATTGAGTTCCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: FVTYVKRQCDGNNSCCWVEKNTG*IEFLNA
Trigger: GGCATTGAGGAACTCAATCAAACCAGTATTCTTTTC...CACCCAACAACAGGAATTATTGCCATCACATTGGCGTTTTACATATGTCACGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CAA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp GCAGTTTTGAAAGAGCAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGCCATTAGTGTTTATTTaGTCACCCATCAACAATTCC +
Preference number: 5 (lower is better)
Translates to: AVLKEQVENIPLMFSSHRPLVFI*SPINNS
Trigger: GGAATTGTTGATGGGTGACAAAATAAACACTAATGG...CCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTGCTCTTTCAAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CAA 90 bp CTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGTTGAGGTCAGAAAAGTaGTATTTAAAACCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: LMFSSHRANQTYRYHTRKLRSEK*YLKPAR
Trigger: CCTAGCTGGTTTTAAATACAACTTTTCTGACCTCAA...CTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CAA 90 bp ACATCAAGCCACAATCGTGATTTTCCACCAGCCATGTTTACAGTAGCCAAATATTCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 5 (lower is better)
Translates to: TSSHNRDFPPAMFTVAKYSVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...ATATTTGGCTACTGTAAACATGGCTGGTGGAAAATCACGATTGTGGCTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCAGGTAGGATTGACTGGCTaGCATTGGATCAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: LYQITLHNHGSFNSGGCQVGLTG*HWIRFS
Trigger: AGAGAATCTGATCCAATGCAAGCCAGTCAATCCTAC...CTGACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGACCACATTTGTAGGATaGACTGGCTTGCATTGGATC +
Preference number: 5 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGTTFVG*TGLHWI
Trigger: GATCCAATGCAAGCCAGTCAATCCTACAAATGTGGT...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CATGTGATTCCAGTTCTGGTACCTTCCTTTTGCACCTCAAAAAGTTATAAGAGGTTGAGGTCAGAAAAGTaGTATTTAAAACCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: HVIPVLVPSFCTSKSYKRLRSEK*YLKPAR
Trigger: CCTAGCTGGTTTTAAATACAACTTTTCTGACCTCAA...CCTCTTATAACTTTTTGAGGTGCAAAAGGAAGGTACCAGAACTGGAATCACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp TTCTCATCCCATAGGGCAAATCAAACTTATCGCTACCATACAAGGAAGCAATCTTTGAGGTCAGAAAAGTaGTATTTAAAACCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: FSSHRANQTYRYHTRKQSLRSEK*YLKPAR
Trigger: CCTAGCTGGTTTTAAATACAACTTTTCTGACCTCAA...AGATTGCTTCCTTGTATGGTAGCGATAAGTTTGATTTGCCCTATGGGATGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CAA 90 bp TTCACAGAAATTAAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATATTGAGGTCAGAAAAGTaGTATTTAAAACCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: FTEIKLVVMNHQAATDSILRSEK*YLKPAR
Trigger: CCTAGCTGGTTTTAAATACAACTTTTCTGACCTCAA...TATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTTAATTTCTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp AAGCTGGTGGTTATGAATCACCAGGCAGCAACAGACAGTATACATAATTATTTGTCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 5 (lower is better)
Translates to: KLVVMNHQAATDSIHNYLSVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...CAAATAATTATGTATACTGTCTGTTGCTGCCTGGTGATTCATAACCACCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp ACTCATCAAAGAGATCACAACTCTGCAGTTTTGAAAGAGCAAGTCGAAAATATTTTTTCCTTCTTGAGCTaGCCTAGCTTAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: THQRDHNSAVLKEQVENIFSFLS*PSLASL
Trigger: CAGTGAAGCTAAGCTAGGCAAGCTCAAGAAGGAAAA...AATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000469105.5
ENST00000486249.5
CDS-3UTR CAA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTAGTAGGATTGACTGGCTaGCATTGGATCAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLVGLTG*HWIRFS
Trigger: AGAGAATCTGATCCAATGCAAGCCAGTCAATCCTAC...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAAT +
Preference number: 5 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVHNSAV*KEQVEN
Trigger: ATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTG...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATCCATTAGTGTTTATTTaGTCACCCATCAACAATTCC +
Preference number: 5 (lower is better)
Translates to: QVENIPLMFSSHRANQTYPLVFI*SPINNS
Trigger: GGAATTGTTGATGGGTGACAAAATAAACACTAATGG...ATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469105.5
ENST00000486249.5
ENST00000497621.5
CDS-3UTR CAA 90 bp CATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGGGTTGTCTCTGTAGAGTCAATCTaGAGTCAAGTTGATTACGAG +
Preference number: 5 (lower is better)
Translates to: HCTKLLFTIMVHLILGVVSVESI*SQVDYE
Trigger: CTCGTAATCAACTTGACTCAAGATTGACTCTACAGA...GACAACCCCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000469105.5
ENST00000483910.5
ENST00000486249.5
ENST00000497621.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CAAGTCGAAAATATTCCGCTGATGTTCTCATCCCATAGGGCAAATCAAACTTATTGTTACATGGGTATATaGTGTGATACTGAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: QVENIPLMFSSHRANQTYCYMGI*CDTEVC
Trigger: ACAAACCTCAGTATCACACAATATACCCATGTAACA...ATAAGTTTGATTTGCCCTATGGGATGAGAACATCAGCGGAATATTTTCGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486249.5
CDS-3UTR CAA 90 bp CTGCCTTCATTGTACCAAATTACTCTTCACAATCATGGTTCATTTAATTCTGGGTGTTACATGGGTATATaGTGTGATACTGAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: LPSLYQITLHNHGSFNSGCYMGI*CDTEVC
Trigger: ACAAACCTCAGTATCACACAATATACCCATGTAACA...CCCAGAATTAAATGAACCATGATTGTGAAGAGTAATTTGGTACAATGAAGGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS-3UTR CAA 90 bp CATTCTGTTTCTGAGCCAAATCTAATGTATTTCACCCTTTATACACCCTCTTTATGTTACATGGGTATATaGTGTGATACTGAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: HSVSEPNLMYFTLYTPSLCYMGI*CDTEVC
Trigger: ACAAACCTCAGTATCACACAATATACCCATGTAACA...TAAAGAGGGTGTATAAAGGGTGAAATACATTAGATTTGGCTCAGAAACAGAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265261.10
ENST00000394162.5
ENST00000486249.5
ENST00000613264.4
CDS GCA 72 bp CAGAGGCGCACCGGGCTCCGAGACCTGAGGGGCCGCTaGTCCAGCCGGCTGCTGCCTCTCTCGCGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: QRRTGLRDLRGR*SSRLLPLSRRL
Trigger: CAGGCGCCGCGAGAGAGGCAGCAGCCGGCTGGAGCAGCGGCCCCTCAGGTCTCGGAGCCCGGTGCGCCTCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000480133.1
ENST00000497621.5
ENST00000613264.4
CDS TCA 72 bp GCAGTGCAAACCCGCAGCGAAGCCGGCCGGCAAGAGTaGCCCGCCGAGGCCCAGGAGCGACGACCGCAGAGG +
Preference number: 6 (lower is better)
Translates to: AVQTRSEAGRQE*PAEAQERRPQR
Trigger: CCTCTGCGGTCGTCGCTCCTGGGCCTCGGCGGGTCACTCTTGCCGGCCGGCTTCGCTGCGGGTTTGCACTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000480133.1
ENST00000497621.5
ENST00000613264.4
CDS CCA 72 bp CGCAGAAGCCCGAGGCCGGCAGAAACCAAAGGAAGGTaGCGCGGGCCAGGGGCGGCGCGGGCACGATTCCTT +
Preference number: 6 (lower is better)
Translates to: RRSPRPAETKGR*RGPGAARARFL
Trigger: AAGGAATCGTGCCCGCGCCGCCCCTGGCCCGCGCCACCTTCCTTTGGTTTCTGCCGGCCTCGGGCTTCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000480133.1
ENST00000497621.5
ENST00000613264.4
CDS TCA 72 bp TTCCCCGCCCGGCTGGCAGGCGGCAGAAGTAAACACTaGGGCTTGTGGCGCCGCGGACTGACTGTGACACAA +
Preference number: 6 (lower is better)
Translates to: FPARLAGGRSKH*GLWRRGLTVTQ
Trigger: TTGTGTCACAGTCAGTCCGCGGCGCCACAAGCCTCAGTGTTTACTTCTGCCGCCTGCCAGCCGGGCGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265261.10
ENST00000489112.5
CDS GCA 72 bp ACAAGATACCCTCTCATGGCTGGCTCACCCGGGCAGTaGAAACCCGCAGCGAAGCCGGCCGGCAAGAGTGAC +
Preference number: 6 (lower is better)
Translates to: TRYPLMAGSPGQ*KPAAKPAGKSD
Trigger: GTCACTCTTGCCGGCCGGCTTCGCTGCGGGTTTGCACTGCCCGGGTGAGCCAGCCATGAGAGGGTATCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS GCA 72 bp GGTTGTGCTGCTTCCTCACTTGCAAATGCCGGGCAGTaGAAACCCGCAGCGAAGCCGGCCGGCAAGAGTGAC +
Preference number: 6 (lower is better)
Translates to: GCAASSLANAGQ*KPAAKPAGKSD
Trigger: GTCACTCTTGCCGGCCGGCTTCGCTGCGGGTTTGCACTGCCCGGCATTTGCAAGTGAGGAAGCAGCACAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS CCA 72 bp ATCACCGCGAAGGGAGGGACGAGGAAAGGCGGCGGGTaGCTTCAGGACAAGGTAGGAGGATCGATTTCCACA +
Preference number: 6 (lower is better)
Translates to: ITAKGGTRKGGG*LQDKVGGSIST
Trigger: TGTGGAAATCGATCCTCCTACCTTGTCCTGAAGCCACCCGCCGCCTTTCCTCGTCCCTCCCTTCGCGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265261.10
ENST00000460774.5
ENST00000462152.5
ENST00000466482.5
ENST00000469105.5
ENST00000483910.5
ENST00000489112.5
CDS CCA 72 bp ACTCAGGAATATGGCCACAAGATACCCTCTCATGGCTaGCTCACCCGGGCAGTGCAAACCCGCAGCGAAGCC +
Preference number: 6 (lower is better)
Translates to: TQEYGHKIPSHG*LTRAVQTRSEA
Trigger: GGCTTCGCTGCGGGTTTGCACTGCCCGGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS CCA 72 bp CAGCACTCAGGAATATGGCCACAAGATACCCTCTCATaGCTGGCTCACCCGGGCAGTGCAAACCCGCAGCGA +
Preference number: 6 (lower is better)
Translates to: QHSGIWPQDTLS*LAHPGSANPQR
Trigger: TCGCTGCGGGTTTGCACTGCCCGGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS GCA 72 bp AGGCTGGATCTTATTTCTCCGTTTCATTTCCACAGGTaGCACCCCGGGCAGTGCAAACCCGCAGCGAAGCCG +
Preference number: 6 (lower is better)
Translates to: RLDLISPFHFHR*HPGQCKPAAKP
Trigger: CGGCTTCGCTGCGGGTTTGCACTGCCCGGGGTGGCACCTGTGGAAATGAAACGGAGAAATAAGATCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480133.1
CDS GCA 72 bp CGAAAGAGGGACCAGGCTGCCAAAGACTCAGGACGCTaGCTGCTGAATTGCTGGGGCCTCTCTGTTAGAAAT +
Preference number: 6 (lower is better)
Translates to: RKRDQAAKDSGR*LLNCWGLSVRN
Trigger: ATTTCTAACAGAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTGGTCCCTCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000465004.1
ENST00000489112.5
ENST00000497621.5
CDS GCA 72 bp TCAGCCCCTGGACAGGCCGTCATCCATCCTAGTCTCTaGTGGTCTTCAGCTCACACTGACATACACTCCAGA +
Preference number: 6 (lower is better)
Translates to: SAPGQAVIHPSL*WSSAHTDIHSR
Trigger: TCTGGAGTGTATGTCAGTGTGAGCTGAAGACCAGCAGAGACTAGGATGGATGACGGCCTGTCCAGGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468553.5
ENST00000476833.5
ENST00000490684.1
CDS CCA 72 bp CAGCACTCAGGAATATGGCCACAAGATACCCTCTCATaGCTGGCTCACCTTTACCAGGTGGCCCTGCTGACA +
Preference number: 6 (lower is better)
Translates to: QHSGIWPQDTLS*LAHLYQVALLT
Trigger: TGTCAGCAGGGCCACCTGGTAAAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468553.5
ENST00000476833.5
ENST00000490684.1
ENST00000492254.5
CDS CCA 72 bp CAGCACTCAGGAATATGGCCACAAGATACCCTCTCATaGCTGGCTCACCTCCATACCTTTACCAGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: QHSGIWPQDTLS*LAHLHTFTRWP
Trigger: GGGCCACCTGGTAAAGGTATGGAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485391.5
ENST00000495376.5
CDS CAA 90 bp TCTGTTAGAAATTATCTAAAACCCAGGGTTGTGCTGCTTCCTCACTaGCAAATGCCGGGCAGTGCAAACCCGCAGCGAAGCCGGCCGGCA +
Preference number: 6 (lower is better)
Translates to: SVRNYLKPRVVLLPH*QMPGSANPQRSRPA
Trigger: TGCCGGCCGGCTTCGCTGCGGGTTTGCACTGCCCGGCATTTGCAAGTGAGGAAGCAGCACAACCCTGGGTTTTAGATAATTTCTAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS GCA 72 bp CCTTACTGGGACCGGGCAGGTAACTCACGTGGTCTTTaGATCTCATTTCTATCAGAGGGATGTCGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: PYWDRAGNSRGL*ISFLSEGCRSP
Trigger: AGGGGAGCGACATCCCTCTGATAGAAATGAGATGCAAAGACCACGTGAGTTACCTGCCCGGTCCCAGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491912.1
CDS GCA 72 bp CCTTACTGGGACCGGGCAGGTAACTCACGTGGTCTTTaGATCTCATTTCTATCAGAGGGATGTCGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: PYWDRAGNSRGL*ISFLSEGCRSP
Trigger: TGGGGAGCGACATCCCTCTGATAGAAATGAGATGCAAAGACCACGTGAGTTACCTGCCCGGTCCCAGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495502.1
CDS CCA 72 bp ACTCAGGAATATGGCCACAAGATACCCTCTCATGGCTaGCTCACCTCCATACCTTTACCAGGTGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: TQEYGHKIPSHG*LTSIPLPGGPA
Trigger: AGCAGGGCCACCTGGTAAAGGTATGGAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485391.5
ENST00000495376.5
CDS CAA 72 bp AATTATCTAAAACCCAGGGTTGTGCTGCTTCCTCACTaGCAAATGCCGGGCAGTGCAAACCCGCAGCGAAGC +
Preference number: 6 (lower is better)
Translates to: NYLKPRVVLLPH*QMPGSANPQRS
Trigger: GCTTCGCTGCGGGTTTGCACTGCCCGGCATTTGCAAGTGAGGAAGCAGCACAACCCTGGGTTTTAGATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394162.5
ENST00000497621.5
CDS GCA 72 bp CAGGCTGCCAAAGACTCAGGACGCTGCCTGCTGAATTaGTGGGGCCTCTCTGTTAGAAATTATCTAAAACCC +
Preference number: 6 (lower is better)
Translates to: QAAKDSGRCLLN*WGLSVRNYLKP
Trigger: GGGTTTTAGATAATTTCTAACAGAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000465004.1
ENST00000489112.5
ENST00000497621.5
CDS CCA 72 bp GCTGCCAAAGACTCAGGACGCTGCCTGCTGAATTGCTaGGGCCTCTCTGTTAGAAATTATCTAAAACCCAGG +
Preference number: 6 (lower is better)
Translates to: AAKDSGRCLLNC*GLSVRNYLKPR
Trigger: CCTGGGTTTTAGATAATTTCTAACAGAGAGGCCCCAGCAATTCAGCAGGCAGCGTCCTGAGTCTTTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394162.5
ENST00000465004.1
ENST00000489112.5
ENST00000497621.5
CDS CCA 72 bp GCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCTGGCTCACCCG +
Preference number: 6 (lower is better)
Translates to: AVHNRGRQHSGI*PQDTLSWLAHP
Trigger: CGGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613264.4
CDS CAA 72 bp CGGCCCATACAAAACAGGCCATGCATGGGCAGTCATTaGCCCATCCCTGGTATAGATTCAACTACCTTCCCT +
Preference number: 6 (lower is better)
Translates to: RPIQNRPCMGSH*PIPGIDSTTFP
Trigger: AGGGAAGGTAGTTGAATCTATACCAGGGATGGGCAAATGACTGCCCATGCATGGCCTGTTTTGTATGGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495502.1
CDS CCA 72 bp GCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCTGGCTCACCTC +
Preference number: 6 (lower is better)
Translates to: AVHNRGRQHSGI*PQDTLSWLAHL
Trigger: GAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485391.5
ENST00000495376.5
CDS CCA 72 bp GCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCCGGAGTCTCAG +
Preference number: 6 (lower is better)
Translates to: AVHNRGRQHSGI*PQDTLSWPESQ
Trigger: CTGAGACTCCGGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486334.6
CDS CCA 72 bp GCAGTACATAATAGAGGAAGACAGCACTCAGGAATATaGCCACAAGATACCCTCTCATGGCTGGCTCACCTT +
Preference number: 6 (lower is better)
Translates to: AVHNRGRQHSGI*PQDTLSWLAHL
Trigger: AAGGTGAGCCAGCCATGAGAGGGTATCTTGTGGCCATATTCCTGAGTGCTGTCTTCCTCTATTATGTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265261.10
ENST00000460774.5
ENST00000468553.5
ENST00000469105.5
ENST00000476833.5
ENST00000483910.5
ENST00000486249.5
ENST00000490684.1
ENST00000492254.5
ENST00000497008.5
CDS GCA 72 bp TCCTCACTTGCAAATGCGTCCTCCTTTCTCCTAAACTaGCTCGGAGCTTGTTTTGTTAGGTCTAGTTCCATT +
Preference number: 6 (lower is better)
Translates to: SSLANASSFLLN*LGACFVRSSSI
Trigger: AATGGAACTAGACCTAACAAAACAAGCTCCGAGGCAGTTTAGGAGAAAGGAGGACGCATTTGCAAGTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465004.1
CDS TCA 72 bp TCAGCTATGACAAGTCTGGGGTCACTATCCCATAAATaGCAGCTGAAATCCACACCCAAGCCTAATTATAAG +
Preference number: 6 (lower is better)
Translates to: SAMTSLGSLSHK*QLKSTPKPNYK
Trigger: CTTATAATTAGGCTTGGGTGTGGATTTCAGCTGTCATTTATGGGATAGTGACCCCAGACTTGTCATAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474595.1
CDS TCA 72 bp TGGTTTGTATGTTGGACTAAAGGCAGGAGTGTACACTaGAACTTCTTCCATGAGATGTTGATTTCTCCTTAC +
Preference number: 6 (lower is better)
Translates to: WFVCWTKGRSVH*NFFHEMLISPY
Trigger: GTAAGGAGAAATCAACATCTCATGGAAGAAGTTTCAGTGTACACTCCTGCCTTTAGTCCAACATACAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491912.1
ENST00000495502.1
CDS CAA 90 bp TACGCGTTTTGTCAAACTCATCAAAGAGATCACAACTCTGCAGTTTaGAAAGAGCAAGTCGAAAATATTCCGAATGTTGAAGGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: YAFCQTHQRDHNSAV*KEQVENIPNVEGLS
Trigger: TGACAAGCCTTCAACATTCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGTTTGACAAAACGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474595.1
CDS CAA 72 bp CTTTTTACAGGGTATGCTCCATATAGGACTCTGCATTaGTGTTTTACATTATGCAGGTCTACATTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: LFTGYAPYRTLH*CFTLCRSTFFA
Trigger: GGCAAAGAATGTAGACCTGCATAATGTAAAACACAAATGCAGAGTCCTATATGGAGCATACCCTGTAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493953.1
CDS TCA 72 bp GTCAAACTCATCAAAGAGATCACAACTCTGCAGTTTTaGAAGAGCAAGTCGAAAATATTCCGAATGTTGAAG +
Preference number: 6 (lower is better)
Translates to: VKLIKEITTLQF*KSKSKIFRMLK
Trigger: CTTCAACATTCGGAATATTTTCGACTTGCTCTTTCAAAACTGCAGAGTTGTGATCTCTTTGATGAGTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474595.1