RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST3GAL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157350

Ensembl transcript IDs: ENST00000342907.3, ENST00000393640.8, ENST00000561708.1, ENST00000566097.1, ENST00000567586.1, ENST00000567822.1

Found 791 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCAGAGGGCGCCACTCCCGGCTTCCTGGAGACGCAGGAAGCCCTaGGGGCGCAGCCATCCCACAGCGCGGCCGAGGTGGGACTGGGGG +
Preference number: 1 (lower is better)
Translates to: PQRAPLPASWRRRKP*GRSHPTARPRWDWG
Trigger: CCCCCAGTCCCACCTCGGCCGCGCTGTGGGATGGCTGCGCCCCCAGGGCTTCCTGCGTCTCCAGGAAGCCGGGAGTGGCGCCCTCTGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 90 bp CTATCCGGGCAGGCGGGGAAAGGGGCCGGGCGGCCACCTATCTCCTaGGGCCCGCAAAGACCGCCCGCTCTCCTCCAGGTCTGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: LSGQAGKGAGRPPIS*GPQRPPALLQVWPA
Trigger: AGCTGGCCAGACCTGGAGGAGAGCGGGCGGTCTTTGCGGGCCTCAGGAGATAGGTGGCCGCCCGGCCCCTTTCCCCGCCTGCCCGGATAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 90 bp TGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGATTGGTaGCAGGCCCGGCCGGTCCCCCAGTCTCGTGATTGGCGGGGCACA +
Preference number: 1 (lower is better)
Translates to: WLGETEAPPDRSADW*QARPVPQSRDWRGT
Trigger: TGTGCCCCGCCAATCACGAGACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp GATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGATTaGTGCCAGGCCCGGCCGGTCCCCCAGTCTCGTGATTGGCGGGGC +
Preference number: 1 (lower is better)
Translates to: DWLGETEAPPDRSAD*CQARPVPQSRDWRG
Trigger: GCCCCGCCAATCACGAGACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp CTCCAGTGCGGTGCCCGTGGTAACAGCGTTTCACAGGAAGCACCGTaGAGACGCAGCCCAGGGGACTGCCATGGCCCTGCGAAGGGGCAG +
Preference number: 1 (lower is better)
Translates to: LQCGARGNSVSQEAP*RRSPGDCHGPAKGQ
Trigger: CTGCCCCTTCGCAGGGCCATGGCAGTCCCCTGGGCTGCGTCTCCACGGTGCTTCCTGTGAAACGCTGTTACCACGGGCACCGCACTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 90 bp TCCTCCAGGTCTGGCCAGCTACTAAGACGATCCTCCGCCCGAGGCTaGCGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCTCA +
Preference number: 1 (lower is better)
Translates to: SSRSGQLLRRSSARG*RKCFAEARAMLSSS
Trigger: TGAGGAGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGGATCGTCTTAGTAGCTGGCCAGACCTGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 90 bp GGCGCTGAGAAGGCTGCGGGTGAACGGGAGGGTCGAGGGCACACGTaGGTGACAGCACCTTGCACTGAAGGGGACAGGGCTTCCTCGAGC +
Preference number: 1 (lower is better)
Translates to: GAEKAAGEREGRGHT*VTAPCTEGDRASSS
Trigger: GCTCGAGGAAGCCCTGTCCCCTTCAGTGCAAGGTGCTGTCACTCACGTGTGCCCTCGACCCTCCCGTTCACCCGCAGCCTTCTCAGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 90 bp GCGCGCAAGTCTCCTCTTCCCCGGCCGGCTCCCGGCTGCGAGCTCTaGCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACG +
Preference number: 1 (lower is better)
Translates to: ARKSPLPRPAPGCEL*QLRICKESAVWPPT
Trigger: CGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGCAGAGCTCGCAGCCGGGAGCCGGCCGGGGAAGAGGAGACTTGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 90 bp CGGCTTGCGGCGCGCAAGTCTCCTCTTCCCCGGCCGGCTCCCGGCTaGGAGCTCTGCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGG +
Preference number: 1 (lower is better)
Translates to: RLAARKSPLPRPAPG*ELCQLRICKESAVW
Trigger: CCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGCAGAGCTCGCAGCCGGGAGCCGGCCGGGGAAGAGGAGACTTGCGCGCCGCAAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 90 bp AATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATaGAAGCAGCTTCCAGGTGGAACCCCGGCCGCGAGCTTCCCAGCC +
Preference number: 1 (lower is better)
Translates to: NSTSSPVRDLSWVQP*KQLPGGTPAASFPA
Trigger: GGCTGGGAAGCTCGCGGCCGGGGTTCCACCTGGAAGCTGCTTGCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp AGAATGAGCCCCAGGCAAAGTTACCCCCAGGCAAGAGGCGATGGGTaGAGGAGGAGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGC +
Preference number: 1 (lower is better)
Translates to: RMSPRQSYPQARGDG*RRRYMQRAAGPIAS
Trigger: GCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCTCCTCCTCCACCCATCGCCTCTTGCCTGGGGGTAACTTTGCCTGGGGCTCATTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp CGTCAGGGACCTAAGCTGGGTTCAGCCATGCAAGCAGCTTCCAGGTaGAACCCCGGCCGCGAGCTTCCCAGCCCTTCTAGAGCGGGAGAT +
Preference number: 1 (lower is better)
Translates to: RQGPKLGSAMQAASR*NPGRELPSPSRAGD
Trigger: ATCTCCCGCTCTAGAAGGGCTGGGAAGCTCGCGGCCGGGGTTCCACCTGGAAGCTGCTTGCATGGCTGAACCCAGCTTAGGTCCCTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp GAGCGGCCGCTGGCCCGCCCCCGAAGGCCATTGATTGGAGGAGACTaGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGG +
Preference number: 1 (lower is better)
Translates to: ERPLARPRRPLIGGD*TQRRKFSLSHMIGW
Trigger: CCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGCGGGCCAGCGGCCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 90 bp CTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTaGCTGGTGGTGTCAACTAAGAAAAGGGGGAGCATCTGCGCCGTC +
Preference number: 1 (lower is better)
Translates to: LFPQPAAGTYQRPGS*LVVSTKKRGSICAV
Trigger: GACGGCGCAGATGCTCCCCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp TCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTGCCTaGTGGTGTCAACTAAGAAAAGGGGGAGCATCTGCGCCGTCACTG +
Preference number: 1 (lower is better)
Translates to: SLSQLQEPTNGQEAA*WCQLRKGGASAPSL
Trigger: CAGTGACGGCGCAGATGCTCCCCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp TGTCTTGGAGCGCAGAGTCCAGGAATGAGGTGCCTCCTGTATAGGTaGGGGAGGGTATCTGGGAGTCATCTCGCCCCTCCCATATCCCCC +
Preference number: 1 (lower is better)
Translates to: CLGAQSPGMRCLLYR*GRVSGSHLAPPISP
Trigger: GGGGGATATGGGAGGGGCGAGATGACTCCCAGATACCCTCCCCCACCTATACAGGAGGCACCTCATTCCTGGACTCTGCGCTCCAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp GACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTaGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGATTGGTGCC +
Preference number: 1 (lower is better)
Translates to: DWTQRRKFSLSHMIG*EKQKLRPTAAQIGA
Trigger: GGCACCAATCTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp CTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTGCCTGGTaGTGTCAACTAAGAAAAGGGGGAGCATCTGCGCCGTCACTGTTG +
Preference number: 1 (lower is better)
Translates to: LSQLQEPTNGQEAAW*CQLRKGGASAPSLL
Trigger: CAACAGTGACGGCGCAGATGCTCCCCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 90 bp AGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCTCAGAAAGCGTaGAAGAAAACCCTAACCCAAAGCATGAGGGAGTGGGGATTGAGC +
Preference number: 1 (lower is better)
Translates to: SASPRPAPCSPPQKA*KKTLTQSMREWGLS
Trigger: GCTCAATCCCCACTCCCTCATGCTTTGGGTTAGGGTTTTCTTTCACGCTTTCTGAGGAGGAGAGCATGGCGCGGGCCTCGGCGAAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 90 bp ATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCTTAACCAAAGAATaGGCCCCAGGCAAAGTTACCCCCAGGCAAGAGGCGATGGGTGGA +
Preference number: 1 (lower is better)
Translates to: ICGLATHGSFSLTKE*APGKVTPRQEAMGG
Trigger: TCCACCCATCGCCTCTTGCCTGGGGGTAACTTTGCCTGGGGCTCATTCTTTGGTTAAGCTGAAGCTGCCGTGGGTGGCCAAACCGCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 90 bp GTGTTAATTCCACACTCTGAGGACCAGGCTGGCCCAGATACATACTaGTCCTCAAGCCTCACAGAGGCGGGAGAGGGGGACCTCCTCTTG +
Preference number: 1 (lower is better)
Translates to: VLIPHSEDQAGPDTY*SSSLTEAGEGDLLL
Trigger: CAAGAGGAGGTCCCCCTCTCCCGCCTCTGTGAGGCTTGAGGAGCAGTATGTATCTGGGCCAGCCTGGTCCTCAGAGTGTGGAATTAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp AGGAGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTaGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGATTGG +
Preference number: 1 (lower is better)
Translates to: RRLDTAPEVFLESHD*LGETEAPPDRSADW
Trigger: CCAATCTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp GCCCAGCCTGTGGCCACCCAAATGTATCGGAGCCTGATGGATACCTaGAGACATCATGTTGACAGAGGCCAAAGTGGTTACAGGACAGCC +
Preference number: 1 (lower is better)
Translates to: AQPVATQMYRSLMDT*RHHVDRGQSGYRTA
Trigger: GGCTGTCCTGTAACCACTTTGGCCTCTGTCAACATGATGTCTCCAGGTATCCATCAGGCTCCGATACATTTGGGTGGCCACAGGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 90 bp CAAAGACAGCTGAGATGTCAAACTCTTCCCTTTCATGGTCTCCAGTaGGGTGCCCGTGGTAACAGCGTTTCACAGGAAGCACCGTGGAGA +
Preference number: 1 (lower is better)
Translates to: QRQLRCQTLPFHGLQ*GARGNSVSQEAPWR
Trigger: TCTCCACGGTGCTTCCTGTGAAACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACATCTCAGCTGTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 90 bp CTCACAGAGGCGGGAGAGGGGGACCTCCTCTTGGATTTTGTGGGTTaGTTGTTACCCAGGCATAGACTTGCTGCAGGAGCTGTGATTTTT +
Preference number: 1 (lower is better)
Translates to: LTEAGEGDLLLDFVG*LLPRHRLAAGAVIF
Trigger: AAAAATCACAGCTCCTGCAGCAAGTCTATGCCTGGGTAACAACCAACCCACAAAATCCAAGAGGAGGTCCCCCTCTCCCGCCTCTGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 90 bp CATTTTATAGCAAGGCCGGATGGAACTGGGCGCCCTGAGTGCAGATaGCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAAC +
Preference number: 1 (lower is better)
Translates to: HFIARPDGTGRPECR*HMFLLLHRLPSGEN
Trigger: GTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCACTCAGGGCGCCCAGTTCCATCCGGCCTTGCTATAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 90 bp AAGGCAAAGTCATTTTATAGCAAGGCCGGATGGAACTGGGCGCCCTaGGTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTC +
Preference number: 1 (lower is better)
Translates to: KAKSFYSKAGWNWAP*VQMPYVSSASQASL
Trigger: GAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCACTCAGGGCGCCCAGTTCCATCCGGCCTTGCTATAAAATGACTTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 90 bp AACTCAGGAAATCAAGGAAGAAAAAGGTGTCTAGTAAGTACAAGATaGAACATCACTTACCTAACTTCCCTTCCCACAACGTCACTAAAG +
Preference number: 1 (lower is better)
Translates to: NSGNQGRKRCLVSTR*NITYLTSLPTTSLK
Trigger: CTTTAGTGACGTTGTGGGAAGGGAAGTTAGGTAAGTGATGTTTCATCTTGTACTTACTAGACACCTTTTTCTTCCTTGATTTCCTGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCACAGCGCGGCCGAGGTaGGACTGGGGGTCCCGCAGC +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSTARPR*DWGSRS
Trigger: GCTGCGGGACCCCCAGTCCCACCTCGGCCGCGCTGT...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCCGGTGCCCGATAGATaGGCCGGAAGGGTCGCGGCG +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSPVPDR*AGRVAA
Trigger: CGCCGCGACCCTTCCGGCCCATCTATCGGGCACCGG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGGATTGAGCGGCCGCTaGCCCGCCCCCGAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSGLSGR*PAPEGH
Trigger: ATGGCCTTCGGGGGCGGGCCAGCGGCCGCTCAATCC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCAGACGCCCCTGGGCTaGAGCATGATTGGTCGCGGG +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSQTPLG*SMIGRG
Trigger: CCCGCGACCAATCATGCTGCAGCCCAGGGGCGTCTG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGACCGCAGCGCAGATTaGTGCCAGGCCCGGCCGGTC +
Preference number: 2 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHDRSAD*CQARPV
Trigger: GACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTTGGTCGCGGGTTGCTaGTCCTGGGTCCCGGGCCGG +
Preference number: 2 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSLVAGC*SWVPGR
Trigger: CCGGCCCGGGACCCAGGACCAGCAACCCGCGACCAA...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCCCTGGGCTGCAGCATaGTTGGTCGCGGGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGPWAAA*LVAGCW
Trigger: CCAGCAACCCGCGACCAATCATGCTGCAGCCCAGGG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGGTCCCCCAGTCTCGTaGTTGGCGGGGCACAGCAGA +
Preference number: 2 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHGPPVS*LAGHSR
Trigger: TCTGCTGTGCCCCGCCAATCACGAGACTGGGGGACC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGGTCCCCCAGTCTCGTaGTTGGCGGGGCACAGCAGA +
Preference number: 2 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGGPPVS*LAGHSR
Trigger: TCTGCTGTGCCCCGCCAATCACGAGACTGGGGGACC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGGGCTGCAGCATGATTaGTCGCGGGTTGCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSGLQHD*SRVAGP
Trigger: AGGACCAGCAACCCGCGACCAATCATGCTGCAGCCC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGAGGGCACACGTGAGTaGCAGCACCTTGCACTGAAG +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSEGTRE*QHLALK
Trigger: CTTCAGTGCAAGGTGCTGTCACTCACGTGTGCCCTC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCCCGAGGCCCGCGCCATaGTCTCCTCCTCAGAAAGCG +
Preference number: 2 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSPRPAP*SPPQKA
Trigger: CGCTTTCTGAGGAGGAGAGCATGGCGCGGGCCTCGG...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCGAAGGCCATTGATTaGAGGAGACTGGACACAGCG +
Preference number: 2 (lower is better)
Translates to: PPPEADGSASPRPAPCSPPKAID*RRLDTA
Trigger: CGCTGTGTCCAGTCTCCTCCAATCAATGGCCTTCGG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGGGCCGGAGCCCCGGTaGCCGATAGATGGGCCGGAA +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQGPEPR*PIDGPE
Trigger: TTCCGGCCCATCTATCGGGCACCGGGGCTCCGGCCC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCCCCCAGTCTCGTGATTaGCGGGGCACAGCAGACGCC +
Preference number: 2 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCPQSRD*RGTADA
Trigger: GGCGTCTGCTGTGCCCCGCCAATCACGAGACTGGGG...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCCGAAGGCCATTGATTaGAGGAGACTGGACACAGCG +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSPKAID*RRLDTA
Trigger: CGCTGTGTCCAGTCTCCTCCAATCAATGGCCTTCGG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCAACAGGTAGGCTGGTaGGGAGGCCTCCGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQQQVGW*GGLRPR
Trigger: CCTGGGCCGGAGGCCTCCTCACCAGCCTACCTGTTG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCGCAGCGCAGATTGGTaGCAGGCCCGGCCGGTCCCC +
Preference number: 2 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQRSADW*QARPVP
Trigger: GGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCGGCCGGCTCCCGGCTaGGAGCTCTGCCAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCRPAPG*ELCQLR
Trigger: TCTGAGCTGGCAGAGCTCGCAGCCGGGAGCCGGCCG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCGCCCCCGAAGGCCATTaGTTGGAGGAGACTGGACAC +
Preference number: 2 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCAPEGH*LEETGH
Trigger: GTGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGC...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCGGCCACCTATCTCCTaGGGCCCGCAAAGACCGCCC +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCRPPIS*GPQRPP
Trigger: GGGCGGTCTTTGCGGGCCTCAGGAGATAGGTGGCCG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCAACAGGTAGGCTGGTaGGGAGGCCTCCGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLQQVGW*GGLRPR
Trigger: CCTGGGCCGGAGGCCTCCTCACCAGCCTACCTGTTG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGGAGGAGGAGGTACATaGAGCGGGCAGCCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCGGGGT*SGQPGP
Trigger: TGGGCCCGGCTGCCCGCTGCATGTACCTCCTCCTCC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCTTGATTGGAGGAGACTaGACACAGCGCCGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSLIGGD*TQRRKF
Trigger: AAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAA...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGGGATTGAGCGGCCGCTaGCCCGCCCCCGAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQGLSGR*PAPEGH
Trigger: ATGGCCTTCGGGGGCGGGCCAGCGGCCGCTCAATCC...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CAA 90 bp TCTTCCCCGGCCGGCTCCCGGCTGCGAGCTCTGCCAGCTCAGAATTaGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCTTA +
Preference number: 2 (lower is better)
Translates to: SSPAGSRLRALPAQN*QRICGLATHGSFSL
Trigger: TAAGCTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGCAGAGCTCGCAGCCGGGAGCCGGCCGGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCCCTGGGCTGCAGCATaGTTGGTCGCGGGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCPWAAA*LVAGCW
Trigger: CCAGCAACCCGCGACCAATCATGCTGCAGCCCAGGG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCCTCCTCAGAAAGCGTaGAAGAAAACCCTAACCCAA +
Preference number: 2 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSPPQKA*KKTLTQ
Trigger: TTGGGTTAGGGTTTTCTTTCACGCTTTCTGAGGAGG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCCGGGAGGCGGAGCTTaGAATGAGCCGAGATCCCAC +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQPGGGA*NEPRSH
Trigger: GTGGGATCTCGGCTCATTGCAAGCTCCGCCTCCCGG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCGCGACCGCTTTTCTTTaGTGGGTCTGCACGCACCTA +
Preference number: 2 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSATAFL*WVCTHL
Trigger: TAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGC...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCCACTCCCGGCTTCCTaGAGACGCAGGAAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCPLPAS*RRRKPW
Trigger: CCAGGGCTTCCTGCGTCTCCAGGAAGCCGGGAGTGG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGTGGGGGAGGGTATCTaGGAGTCATCTCGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQVGEGI*ESSRPS
Trigger: GGAGGGGCGAGATGACTCCCAGATACCCTCCCCCAC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTTTCTTTGGTGGGTCTaGACGCACCTATCCGGGCAG +
Preference number: 2 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCFLWWV*THLSGQ
Trigger: CTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGTTCCCTCAGCCAGCTaGAGGAACCTACCAACGGCC +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQVPSAS*RNLPTA
Trigger: GGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAAC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGTGGAGGCAGGGCTGTaGCAGAGGGGAAAACCTGAC +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQVEAGL*QRGKPD
Trigger: GTCAGGTTTTCCCCTCTGGCACAGCCCTGCCTCCAC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGACCGCAGCGCAGATTaGTGCCAGGCCCGGCCGGTC +
Preference number: 2 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEDRSAD*CQARPV
Trigger: GACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACCGGTGCCCGATAGATaGGCCGGAAGGGTCGCGGCG +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPPVPDR*AGRVAA
Trigger: CGCCGCGACCCTTCCGGCCCATCTATCGGGCACCGG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CAA 90 bp CCTCAAGCCTCACAGAGGCGGGAGAGGGGGACCTCCTCTTGGATTTaGTGGGTTGGTTGTTACCCAGGCATAGACTTGCTGCAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: PQASQRRERGTSSWI*WVGCYPGIDLLQEL
Trigger: CAGCTCCTGCAGCAAGTCTATGCCTGGGTAACAACCAACCCACAAAATCCAAGAGGAGGTCCCCCTCTCCCGCCTCTGTGAGGCTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACGGCCACCTATCTCCTaGGGCCCGCAAAGACCGCCC +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPRPPIS*GPQRPP
Trigger: GGGCGGTCTTTGCGGGCCTCAGGAGATAGGTGGCCG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCGCAGAGTCCAGGAATaGGGTGCCTCCTGTATAGGT +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQRRVQE*GASCIG
Trigger: ACCTATACAGGAGGCACCTCATTCCTGGACTCTGCG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGGGCCGGAGCCCCGGTaGCCGATAGATGGGCCGGAA +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAGPEPR*PIDGPE
Trigger: TTCCGGCCCATCTATCGGGCACCGGGGCTCCGGCCC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTTACAGGACAGCCACTaGGAGGAGCTGCTACCAGGA +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQLQDSH*EELLPG
Trigger: TCCTGGTAGCAGCTCCTCGCAGTGGCTGTCCTGTAA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTTTGGTCGCGGGTTGCTaGTCCTGGGTCCCGGGCCGG +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQALVAGC*SWVPGR
Trigger: CCGGCCCGGGACCCAGGACCAGCAACCCGCGACCAA...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTTGAGTCACATGATTaGCTGGGAGAAACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLESHD*LGETEA
Trigger: AGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGGACAGCCCAGCCTGTaGCCACCCAAATGTATCGGA +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCGQPSL*PPKCIG
Trigger: TCCGATACATTTGGGTGGCCACAGGCTGGGCTGTCC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTTCCTCCGCCCGAGGCTaGCGGAAGTGCTTCGCCGAG +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQASSARG*RKCFAE
Trigger: CTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGGA...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGGTCGAGGGCACACGTaGGTGACAGCACCTTGCACT +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVGRGHT*VTAPCT
Trigger: AGTGCAAGGTGCTGTCACTCACGTGTGCCCTCGACC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCGCAGAGTCCAGGAATaGGGTGCCTCCTGTATAGGT +
Preference number: 2 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLRRVQE*GASCIG
Trigger: ACCTATACAGGAGGCACCTCATTCCTGGACTCTGCG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGACAGGAGAATGGTGTaGACCCGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVDRRMV*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGTC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACAGACGCCCCTGGGCTaGAGCATGATTGGTCGCGGG +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPQTPLG*SMIGRG
Trigger: CCCGCGACCAATCATGCTGCAGCCCAGGGGCGTCTG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCCGAGGCCCGCGCCATaGTCTCCTCCTCAGAAAGCG +
Preference number: 2 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIPRPAP*SPPQKA
Trigger: CGCTTTCTGAGGAGGAGAGCATGGCGCGGGCCTCGG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACCCCAGTCTCGTGATTaGCGGGGCACAGCAGACGCC +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPPQSRD*RGTADA
Trigger: GGCGTCTGCTGTGCCCCGCCAATCACGAGACTGGGG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGTCAGGGACCTAAGCTaGGTTCAGCCATGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLVRDLS*VQPCKQ
Trigger: CTGCTTGCATGGCTGAACCCAGCTTAGGTCCCTGAC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGCCTCCTGTATAGGTaGGGGAGGGTATCTGGGAGT +
Preference number: 2 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLCLLYR*GRVSGS
Trigger: ACTCCCAGATACCCTCCCCCACCTATACAGGAGGCA...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCTTGGGAGGCCAAGGTaGGCAGATCACGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVLGRPR*ADHEVR
Trigger: CCTGACCTCGTGATCTGCCCACCTTGGCCTCCCAAG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CAA 90 bp AGGCCATTGATTGGAGGAGACTGGACACAGCGCCGGAAGTTTTCCTaGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACC +
Preference number: 2 (lower is better)
Translates to: RPLIGGDWTQRRKFS*SHMIGWEKQKLRPT
Trigger: GGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CAA 90 bp TACTGCTCCTCAAGCCTCACAGAGGCGGGAGAGGGGGACCTCCTCTaGGATTTTGTGGGTTGGTTGTTACCCAGGCATAGACTTGCTGCA +
Preference number: 2 (lower is better)
Translates to: YCSSSLTEAGEGDLL*DFVGWLLPRHRLAA
Trigger: TGCAGCAAGTCTATGCCTGGGTAACAACCAACCCACAAAATCCAAGAGGAGGTCCCCCTCTCCCGCCTCTGTGAGGCTTGAGGAGCAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCTCTTCAGGAAGCACTaGGATGGGAGTGGCAAGACT +
Preference number: 2 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLLFRKH*DGSGKT
Trigger: AGTCTTGCCACTCCCATCTCAGTGCTTCCTGAAGAG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCTCTTCAGGAAGCACTaGGATGGGAGTGGCAAGACT +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCLFRKH*DGSGKT
Trigger: AGTCTTGCCACTCCCATCTCAGTGCTTCCTGAAGAG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGAATTTGCAAAGAATCTaGGGTTTGGCCACCCACGGC +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQNLQRI*GLATHG
Trigger: GCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATT...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGGGGTGGATGACCTGTaGTCAGGAGTTCGAGACCAG +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVGVDDL*SGVRDQ
Trigger: CTGGTCTCGAACTCCTGACCACAGGTCATCCACCCC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGAAATGTATCGGAGCCTaGTGGATACCTGGAGACATC +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQKCIGA*WIPGDI
Trigger: GATGTCTCCAGGTATCCATCAGGCTCCGATACATTT...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCCCGGCTGCGAGCTCTaGCAGCTCAGAATTTGCAAA +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVPGCEL*QLRICK
Trigger: TTTGCAAATTCTGAGCTGGCAGAGCTCGCAGCCGGG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGACAGGTGCGCACCACTaGGCCTGGCTAATTTTTGTA +
Preference number: 2 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLTGAHH*AWLIFV
Trigger: TACAAAAATTAGCCAGGCGCAGTGGTGCGCACCTGT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGAAAATCTGGCTGGATaGTGGGACCTACCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCENLAG*WDLPLP
Trigger: TGGAAGAGGTAGGTCCCAGCATCCAGCCAGATTTTC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGGCTGCAGTGAGCTCTaGACCAGTCTGGGCGACAGG +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAGCSEL*TSLGDR
Trigger: CCTGTCGCCCAGACTGGTGCAGAGCTCACTGCAGCC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTTTGATTGGAGGAGACTaGACACAGCGCCGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCLIGGD*TQRRKF
Trigger: AAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAA...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCACTGCATTCCAGCCTaGGCAATGGAGAGAGACTCC +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVHCIPA*AMERDS
Trigger: GGAGTCTCTCTCCATTGCCCAGGCTGGAATGCAGTG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCCTCCTCAGAAAGCGTaGAAGAAAACCCTAACCCAA +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCPPQKA*KKTLTQ
Trigger: TTGGGTTAGGGTTTTCTTTCACGCTTTCTGAGGAGG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGGTCGAGGGCACACGTaGGTGACAGCACCTTGCACT +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAGRGHT*VTAPCT
Trigger: AGTGCAAGGTGCTGTCACTCACGTGTGCCCTCGACC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGCTCTATTAGTGGTTTaGGAGCTTCACAGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQALLVV*ELHRSL
Trigger: AAGGCTTCTGTGAAGCTCTCAAACCACTAATAGAGC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGAAATGTATCGGAGCCTaGTGGATACCTGGAGACATC +
Preference number: 2 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLKCIGA*WIPGDI
Trigger: GATGTCTCCAGGTATCCATCAGGCTCCGATACATTT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGCCAAAGGGGGTGGATaGCCTGTGGTCAGGAGTTCG +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAAKGGG*PVVRSS
Trigger: CGAACTCCTGACCACAGGTCATCCACCCCCTTTGGC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTAGGCGGAGCTTGCAGTaGGCGGACATAGCACCACTG +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQARRSLQ*ADIAPL
Trigger: CAGTGGTGCTATGTCCGCTCACTGCAAGCTCCGCCT...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTTTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQALGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAACCTCCGCCTCCCAA...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGAAAATTATCCGGGAGTaGTGGTGCATGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: IPATREVEVGELGRRRLQKIIRE*WCMPVI
Trigger: GATTACAGGCATGCACCACCACTCCCGGATAATTTT...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCTTGGGAGGCCAAGGTaGGCAGATCACGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQALGRPR*ADHEVR
Trigger: CCTGACCTCGTGATCTGCCCACCTTGGCCTCCCAAG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTATAAGCAACCAGGAGTaGAACACACCTGTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVISNQE*NTPVEA
Trigger: TGCCTCCACAGGTGTGTTTCACTCCTGGTTGCTTAT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTAGGCACAGGTTGCAGTaGGCCGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQARHRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCGGCTCACTGCAACCTGTGCCT...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTAGCTGGGTTCAGCCATaGAAGCAGCTTCCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: SPMNSSPGGNSRGDNELISWVQP*KQLPGG
Trigger: TCCACCTGGAAGCTGCTTGCATGGCTGAACCCAGCT...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGAAAATCTGGCTGGATaGTGGGACCTACCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVENLAG*WDLPLP
Trigger: TGGAAGAGGTAGGTCCCAGCATCCAGCCAGATTTTC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATTACAGGACAGCCACTaGGAGGAGCTGCTACCAGGA +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPLQDSH*EELLPG
Trigger: TCCTGGTAGCAGCTCCTCGCAGTGGCTGTCCTGTAA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCTTGAGTCACATGATTaGCTGGGAGAAACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCLESHD*LGETEA
Trigger: AGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCTGCGCCGTCACTGTTaGGGAGGGGGCTCTATTAGT +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQALRRHC*GGGSIS
Trigger: ACTAATAGAGCCCCCTCCCCAACAGTGACGGCGCAG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTTGGGAGTGGCAAGACTaGCTGAGGCCTAGCTCTCTA +
Preference number: 2 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIWEWQD*LRPSSL
Trigger: TAGAGAGCTAGGCCTCAGCCAGTCTTGCCACTCCCA...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGCACTGAGATGGGAGTaGCAAGACTGGCTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAALRWE*QDWLRP
Trigger: AGGCCTCAGCCAGTCTTGCCACTCCCATCTCAGTGC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCAGGAAGCACTGAGATaGGAGTGGCAAGACTGGCTG +
Preference number: 2 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIQEALR*EWQDWL
Trigger: CAGCCAGTCTTGCCACTCCCATCTCAGTGCTTCCTG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTAGCCTGATGGATACCTaGAGACATCATGTTGACAGA +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCSLMDT*RHHVDR
Trigger: TCTGTCAACATGATGTCTCCAGGTATCCATCAGGCT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTAGCTTAACCAAAGAATaGGCCCCAGGCAAAGTTACC +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVSLTKE*APGKVT
Trigger: GGTAACTTTGCCTGGGGCTCATTCTTTGGTTAAGCT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCTGGAGACATCATGTTaGCAGAGGCCAAAGTGGTTA +
Preference number: 2 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVLETSC*QRPKWL
Trigger: TAACCACTTTGGCCTCTGTCAACATGATGTCTCCAG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAGGCCCAGATACATACTaGTCCTCAAGCCTCACAGAG +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPGPDTY*SSSLTE
Trigger: CTCTGTGAGGCTTGAGGAGCAGTATGTATCTGGGCC...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAACCGCTTTTCTTTGGTaGGTCTGCACGCACCTATCC +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPTAFLW*VCTHLS
Trigger: GGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGT...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATTCAAGGGATTCTCCTaGCTCAGCCTTCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPFKGFS*LSLPSS
Trigger: GCTACTTGGAAGGCTGAGGCAGGAGAATCCCTTGAA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAAGTCACATGATTGGCTaGGAGAAACAGAAGCTCCGC +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPSHMIG*EKQKLR
Trigger: GCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACT...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCAGGAAGCTGCCTGGTaGTGTCAACTAAGAAAAGGG +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAQEAAW*CQLRKG
Trigger: CCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATCCTCTTGGATTTTGTaGGTTGGTTGTTACCCAGGC +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPSSWIL*VGCYPG
Trigger: GCCTGGGTAACAACCAACCCACAAAATCCAAGAGGA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTACTGTTTGGCATAATTaGATTGCTTTTCATCAACAC +
Preference number: 2 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCTVWHN*IAFHQH
Trigger: GTGTTGATGAAAAGCAATGCAATTATGCCAAACAGT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR GCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTCAACGGCCAGGAAGCTaGCTGGTGGTGTCAACTAAG +
Preference number: 2 (lower is better)
Translates to: LFLLFLLSELERTTLELGQRPGS*LVVSTK
Trigger: CTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTG...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGCTCTCCTCCAGGTCTaGCCAGCTACTAAGACGATC +
Preference number: 2 (lower is better)
Translates to: LFLLFLLSELERTTLELGALLQV*PATKTI
Trigger: GATCGTCTTAGTAGCTGGCCAGACCTGGAGGAGAGC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACTTGTCTGCTGCCTGTaGATGGGTAAAATACTTTTT +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPLVCCL*MGKILF
Trigger: AAAAAGTATTTTACCCATCCACAGGCAGCAGACAAG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGCTATGGGAAAGGAATaGAAAAGGTATCAACTCACA +
Preference number: 2 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAAMGKE*KRYQLT
Trigger: TGTGAGTTGATACCTTTTTCATTCCTTTCCCATAGC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATTTAAAAATCTATTATaGGCTGGGTGTGGTCAAACA +
Preference number: 2 (lower is better)
Translates to: VQMPYVSSASQASLWREPFKNLL*AGCGQT
Trigger: TGTTTGACCACACCCAGCCCATAATAGATTTTTAAA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp GGGTTGCTGGTCCTGGGTCCCGGGCCGGAGCCCCGGTaGCCGATAGATGGGCCGGAAGGGTCGCGGCGAGGC +
Preference number: 3 (lower is better)
Translates to: GLLVLGPGPEPR*PIDGPEGSRRG
Trigger: GCCTCGCCGCGACCCTTCCGGCCCATCTATCGGGCACCGGGGCTCCGGCCCGGGACCCAGGACCAGCAACCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp CAGGCGGGGAAAGGGGCCGGGCGGCCACCTATCTCCTaGGGCCCGCAAAGACCGCCCGCTCTCCTCCAGGTC +
Preference number: 3 (lower is better)
Translates to: QAGKGAGRPPIS*GPQRPPALLQV
Trigger: GACCTGGAGGAGAGCGGGCGGTCTTTGCGGGCCTCAGGAGATAGGTGGCCGCCCGGCCCCTTTCCCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCATGAGGGAGTGGGGATaGAGCGGCCGCTGGCCCGCC +
Preference number: 3 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSMREWG*SGRWPA
Trigger: GGCGGGCCAGCGGCCGCTCAATCCCCACTCCCTCAT...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp GGGCGCAGCCATCCCACAGCGCGGCCGAGGTGGGACTaGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGT +
Preference number: 3 (lower is better)
Translates to: GRSHPTARPRWD*GSRSDRFSLVG
Trigger: ACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACCTCGGCCGCGCTGTGGGATGGCTGCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTaGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGG +
Preference number: 3 (lower is better)
Translates to: GGTGGPAATAFL*WVCTHLSGQAG
Trigger: CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCGTGGAGGCAGGCGGCTaGCGGCGCGCAAGTCTCCTC +
Preference number: 3 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSVEAGG*RRASLL
Trigger: GAGGAGACTTGCGCGCCGCAAGCCGCCTGCCTCCAC...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp GAAACAGAAGCTCCGCCCGACCGCAGCGCAGATTGGTaGCAGGCCCGGCCGGTCCCCCAGTCTCGTGATTGG +
Preference number: 3 (lower is better)
Translates to: ETEAPPDRSADW*QARPVPQSRDW
Trigger: CCAATCACGAGACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCTTCTGTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp GGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGATTaGTGCCAGGCCCGGCCGGTCCCCCAGTCTCGTGAT +
Preference number: 3 (lower is better)
Translates to: GETEAPPDRSAD*CQARPVPQSRD
Trigger: ATCACGAGACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp CCCAGGCAAAGTTACCCCCAGGCAAGAGGCGATGGGTaGAGGAGGAGGTACATGCAGCGGGCAGCCGGGCCC +
Preference number: 3 (lower is better)
Translates to: PRQSYPQARGDG*RRRYMQRAAGP
Trigger: GGGCCCGGCTGCCCGCTGCATGTACCTCCTCCTCCACCCATCGCCTCTTGCCTGGGGGTAACTTTGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp TCTGGCCAGCTACTAAGACGATCCTCCGCCCGAGGCTaGCGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTC +
Preference number: 3 (lower is better)
Translates to: SGQLLRRSSARG*RKCFAEARAML
Trigger: GAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGGATCGTCTTAGTAGCTGGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp AGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATaGAAGCAGCTTCCAGGTGGAACCCCGGCCGCGAGC +
Preference number: 3 (lower is better)
Translates to: SSPVRDLSWVQP*KQLPGGTPAAS
Trigger: GCTCGCGGCCGGGGTTCCACCTGGAAGCTGCTTGCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp GGTGCCCGTGGTAACAGCGTTTCACAGGAAGCACCGTaGAGACGCAGCCCAGGGGACTGCCATGGCCCTGCG +
Preference number: 3 (lower is better)
Translates to: GARGNSVSQEAP*RRSPGDCHGPA
Trigger: CGCAGGGCCATGGCAGTCCCCTGGGCTGCGTCTCCACGGTGCTTCCTGTGAAACGCTGTTACCACGGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCATGATTGGTCGCGGGTaGCTGGTCCTGGGTCCCGGG +
Preference number: 3 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCMIGRG*LVLGPG
Trigger: CCCGGGACCCAGGACCAGCAACCCGCGACCAATCAT...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp GGATTGAGCGGCCGCTGGCCCGCCCCCGAAGGCCATTaGTTGGAGGAGACTGGACACAGCGCCGGAAGTTTT +
Preference number: 3 (lower is better)
Translates to: GLSGRWPAPEGH*LEETGHSAGSF
Trigger: AAAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGCGGGCCAGCGGCCGCTCAATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp GGGTCGAGGGCACACGTGAGTGACAGCACCTTGCACTaGAGGGGACAGGGCTTCCTCGAGCTCTGCCCTGTC +
Preference number: 3 (lower is better)
Translates to: GSRAHVSDSTLH*RGQGFLELCPV
Trigger: GACAGGGCAGAGCTCGAGGAAGCCCTGTCCCCTTCAGTGCAAGGTGCTGTCACTCACGTGTGCCCTCGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp AAGGCTGCGGGTGAACGGGAGGGTCGAGGGCACACGTaGGTGACAGCACCTTGCACTGAAGGGGACAGGGCT +
Preference number: 3 (lower is better)
Translates to: KAAGEREGRGHT*VTAPCTEGDRA
Trigger: AGCCCTGTCCCCTTCAGTGCAAGGTGCTGTCACTCACGTGTGCCCTCGACCCTCCCGTTCACCCGCAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp CAAAGTCCCCTGCCGGTCCCTGTTCCCTCAGCCAGCTaGAGGAACCTACCAACGGCCAGGAAGCTGCCTGGT +
Preference number: 3 (lower is better)
Translates to: QSPLPVPVPSAS*RNLPTARKLPG
Trigger: ACCAGGCAGCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCAGGGGACTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp CACTGCCCATCCCAACCCTCCCCTAACAAAGTCCCCTaGCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACC +
Preference number: 3 (lower is better)
Translates to: HCPSQPSPNKVP*RSLFPQPAAGT
Trigger: GGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCAGGGGACTTTGTTAGGGGAGGGTTGGGATGGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCAGCGACCGCTTTTCTTaGGTGGGTCTGCACGCACCT +
Preference number: 3 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSSDRFS*VGLHAP
Trigger: AGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCT...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp CCTAAGCTGGGTTCAGCCATGCAAGCAGCTTCCAGGTaGAACCCCGGCCGCGAGCTTCCCAGCCCTTCTAGA +
Preference number: 3 (lower is better)
Translates to: PKLGSAMQAASR*NPGRELPSPSR
Trigger: TCTAGAAGGGCTGGGAAGCTCGCGGCCGGGGTTCCACCTGGAAGCTGCTTGCATGGCTGAACCCAGCTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp GCGCAGAGTCCAGGAATGAGGTGCCTCCTGTATAGGTaGGGGAGGGTATCTGGGAGTCATCTCGCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: AQSPGMRCLLYR*GRVSGSHLAPP
Trigger: GGGAGGGGCGAGATGACTCCCAGATACCCTCCCCCACCTATACAGGAGGCACCTCATTCCTGGACTCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTATGATTGGTCGCGGGTaGCTGGTCCTGGGTCCCGGG +
Preference number: 3 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCMIGRG*LVLGPG
Trigger: CCCGGGACCCAGGACCAGCAACCCGCGACCAATCAT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp TCTCCTCTTCCCCGGCCGGCTCCCGGCTGCGAGCTCTaGCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGG +
Preference number: 3 (lower is better)
Translates to: SPLPRPAPGCEL*QLRICKESAVW
Trigger: CCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGCAGAGCTCGCAGCCGGGAGCCGGCCGGGGAAGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp CAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTaGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAG +
Preference number: 3 (lower is better)
Translates to: QRRKFSLSHMIG*EKQKLRPTAAQ
Trigger: CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp CTGGCCCGCCCCCGAAGGCCATTGATTGGAGGAGACTaGACACAGCGCCGGAAGTTTTCCTTGAGTCACATG +
Preference number: 3 (lower is better)
Translates to: LARPRRPLIGGD*TQRRKFSLSHM
Trigger: CATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGCGGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp CTGCAGGAACCTACCAACGGCCAGGAAGCTGCCTGGTaGTGTCAACTAAGAAAAGGGGGAGCATCTGCGCCG +
Preference number: 3 (lower is better)
Translates to: LQEPTNGQEAAW*CQLRKGGASAP
Trigger: CGGCGCAGATGCTCCCCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTGGTAGGTTCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp CCGAGGCCCGCGCCATGCTCTCCTCCTCAGAAAGCGTaGAAGAAAACCCTAACCCAAAGCATGAGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: PRPAPCSPPQKA*KKTLTQSMREW
Trigger: CCACTCCCTCATGCTTTGGGTTAGGGTTTTCTTTCACGCTTTCTGAGGAGGAGAGCATGGCGCGGGCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp TTGGCCACCCACGGCAGCTTCAGCTTAACCAAAGAATaGGCCCCAGGCAAAGTTACCCCCAGGCAAGAGGCG +
Preference number: 3 (lower is better)
Translates to: LATHGSFSLTKE*APGKVTPRQEA
Trigger: CGCCTCTTGCCTGGGGGTAACTTTGCCTGGGGCTCATTCTTTGGTTAAGCTGAAGCTGCCGTGGGTGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp CAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTaGCTGGTGGTGTCAACTAAGAAAAGGGGGAGCATC +
Preference number: 3 (lower is better)
Translates to: QPAAGTYQRPGS*LVVSTKKRGSI
Trigger: GATGCTCCCCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp GACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTaGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGC +
Preference number: 3 (lower is better)
Translates to: DTAPEVFLESHD*LGETEAPPDRS
Trigger: GCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp CAGCTGCAGGAACCTACCAACGGCCAGGAAGCTGCCTaGTGGTGTCAACTAAGAAAAGGGGGAGCATCTGCG +
Preference number: 3 (lower is better)
Translates to: QLQEPTNGQEAA*WCQLRKGGASA
Trigger: CGCAGATGCTCCCCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGGGTGTGGTCAAACATaGGGAGGCCAAAGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVGCGQT*GGQRGW
Trigger: CCACCCCCTTTGGCCTCCCAATGTTTGACCACACCC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp CTGGGCGCCCTGAGTGCAGATGCCATATGTTTCTTCTaGTTCACAGGCTTCCCTCTGGAGAGAACCAGGCTG +
Preference number: 3 (lower is better)
Translates to: LGALSADAICFF*FTGFPLERTRL
Trigger: CAGCCTGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCACTCAGGGCGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCGCCGGAAGTTTTCCTaGAGTCACATGATTGGCTGG +
Preference number: 3 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCRRKFS*SHMIGW
Trigger: CCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCGCCGGAAGTTTTCCTaGAGTCACATGATTGGCTGG +
Preference number: 3 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLRRKFS*SHMIGW
Trigger: CCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTAGCGACCGCTTTTCTTaGGTGGGTCTGCACGCACCT +
Preference number: 3 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVSDRFS*VGLHAP
Trigger: AGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCAAAGAATCTGCGGTTaGGCCACCCACGGCAGCTTC +
Preference number: 3 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVQRICG*ATHGSF
Trigger: GAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR GCA 72 bp TTTCAGTGTCTTGGAGCGCAGAGTCCAGGAATGAGGTaGCTCCTGTATAGGTGGGGGAGGGTATCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: FQCLGAQSPGMR*LLYRWGRVSGS
Trigger: ACTCCCAGATACCCTCCCCCACCTATACAGGAGGCACCTCATTCCTGGACTCTGCGCTCCAAGACACTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACGCCCCCGAAGGCCATaGATTGGAGGAGACTGGACA +
Preference number: 3 (lower is better)
Translates to: VQMPYVSSASQASLWREPRPRRP*IGGDWT
Trigger: TGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGCG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGCCGACATCGGGCCATaGCACTCCAGCCTGGGTAAC +
Preference number: 3 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAADIGP*HSSLGN
Trigger: GTTACCCAGGCTGGAGTGCAATGGCCCGATGTCGGC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp TCAGATTTCAGTGTCTTGGAGCGCAGAGTCCAGGAATaGGGTGCCTCCTGTATAGGTGGGGGAGGGTATCTG +
Preference number: 3 (lower is better)
Translates to: SDFSVLERRVQE*GASCIGGGGYL
Trigger: CAGATACCCTCCCCCACCTATACAGGAGGCACCTCATTCCTGGACTCTGCGCTCCAAGACACTGAAATCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCTGCCAGCTCAGAATTaGCAAAGAATCTGCGGTTTG +
Preference number: 3 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLLPAQN*QRICGL
Trigger: CAAACCGCAGATTCTTTGCAAATTCTGAGCTGGCAG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGGCTCTATTAGTGGTTaGAGAGCTTCACAGAAGCCT +
Preference number: 3 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLGSISG*RASQKP
Trigger: AGGCTTCTGTGAAGCTCTCAAACCACTAATAGAGCC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATTGAGGTGGGTGAACTaGGGAGGCGGAGGTTGCAGT +
Preference number: 3 (lower is better)
Translates to: VQMPYVSSASQASLWREPLRWVN*GGGGCS
Trigger: ACTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGGGTGTGGTCAAACATaGGGAGGCCAAAGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAGCGQT*GGQRGW
Trigger: CCACCCCCTTTGGCCTCCCAATGTTTGACCACACCC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp GTATCGGAGCCTGATGGATACCTGGAGACATCATGTTaGCAGAGGCCAAAGTGGTTACAGGACAGCCACTGC +
Preference number: 3 (lower is better)
Translates to: VSEPDGYLETSC*QRPKWLQDSHC
Trigger: GCAGTGGCTGTCCTGTAACCACTTTGGCCTCTGTCAACATGATGTCTCCAGGTATCCATCAGGCTCCGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACTGATGCCTCTGACCTaGCCAGACAGTCACAGAAGG +
Preference number: 3 (lower is better)
Translates to: VQMPYVSSASQASLWREPLMPLT*PDSHRR
Trigger: CCTTCTGTGACTGTCTGGCAAGGTCAGAGGCATCAG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp GTGGCCACCCAAATGTATCGGAGCCTGATGGATACCTaGAGACATCATGTTGACAGAGGCCAAAGTGGTTAC +
Preference number: 3 (lower is better)
Translates to: VATQMYRSLMDT*RHHVDRGQSGY
Trigger: GTAACCACTTTGGCCTCTGTCAACATGATGTCTCCAGGTATCCATCAGGCTCCGATACATTTGGGTGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CCA 72 bp CTGCTACCAGGAATCCTCTCCAATGAACTCCTCTCCTaGAGGAAACTCAAGAGGCGACAACGAGCTGATTTT +
Preference number: 3 (lower is better)
Translates to: LLPGILSNELLS*RKLKRRQRADF
Trigger: AAAATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGAGGATTCCTGGTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAACCTCCTCTTGGATTTaGTGGGTTGGTTGTTACCCA +
Preference number: 3 (lower is better)
Translates to: VQMPYVSSASQASLWREPTSSWI*WVGCYP
Trigger: TGGGTAACAACCAACCCACAAAATCCAAGAGGAGGT...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp CCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTaGTTTTTAACCAAAATGCTTGTACCCGCTCAGATT +
Preference number: 3 (lower is better)
Translates to: PLLEETQEATTS*FLTKMLVPAQI
Trigger: AATCTGAGCGGGTACAAGCATTTTGGTTAAAAATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR-3UTR CAA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTTTTCTACTTTCGGAATaGGAAAGAACGACACTCGAG +
Preference number: 3 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAFLLSE*ERTTLE
Trigger: CTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAA...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp CCTTCCCACAACGTCACTAAAGCTATGGGAAAGGAATaGAAAAGGTATCAACTCACATGGGCAAATAAATGG +
Preference number: 3 (lower is better)
Translates to: PSHNVTKAMGKE*KRYQLTWANKW
Trigger: CCATTTATTTGCCCATGTGAGTTGATACCTTTTTCATTCCTTTCCCATAGCTTTAGTGACGTTGTGGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR TCA 72 bp AATCAAGGAAGAAAAAGGTGTCTAGTAAGTACAAGATaGAACATCACTTACCTAACTTCCCTTCCCACAACG +
Preference number: 3 (lower is better)
Translates to: NQGRKRCLVSTR*NITYLTSLPTT
Trigger: CGTTGTGGGAAGGGAAGTTAGGTAAGTGATGTTTCATCTTGTACTTACTAGACACCTTTTTCTTCCTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CAA 72 bp CAGACGCCCCTGGGCTGCAGCATGATTGGTCGCGGGTaGCTGGTCCTGGGTCCCGGGCCGGAGCCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QTPLGCSMIGRG*LVLGPGPEPRC
Trigger: GCACCGGGGCTCCGGCCCGGGACCCAGGACCAGCAACCCGCGACCAATCATGCTGCAGCCCAGGGGCGTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCTCCTCCGCCCGAGGCTaGCGGAAGTGCTTCGCCGAG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVSSARG*RKCFAE
Trigger: CTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGGA...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCGCAGCGCAGATTGGTaGCAGGCCCGGCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPRSADW*QARPVP
Trigger: GGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTACAGCGCGGCCGAGGTaGGACTGGGGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPTARPR*DWGSRS
Trigger: GCTGCGGGACCCCCAGTCCCACCTCGGCCGCGCTGT...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGGGAGCACTTCATGGTaGCGGCAGGCGGGTGACGGT +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVGSTSW*RQAGDG
Trigger: ACCGTCACCCGCCTGCCGGCACCATGAAGTGCTCCC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTGGGCCGGAGCCCCGGTaGCCGATAGATGGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPGPEPR*PIDGPE
Trigger: TTCCGGCCCATCTATCGGGCACCGGGGCTCCGGCCC...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTGGATTGAGCGGCCGCTaGCCCGCCCCCGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPGLSGR*PAPEGH
Trigger: ATGGCCTTCGGGGGCGGGCCAGCGGCCGCTCAATCC...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCCCACTCCCGGCTTCCTaGAGACGCAGGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVPLPAS*RRRKPW
Trigger: CCAGGGCTTCCTGCGTCTCCAGGAAGCCGGGAGTGG...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCCATCCAGGGCCCCTaGGTCCAGGTAGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPPIQGP*VQVGER
Trigger: ACGCTCCCCTACCTGGACTCAGGGGCCCTGGATGGG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGCACCAGCACGAAGCTaGCGTTGGCGGGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVAPARS*RWRAGS
Trigger: AGAACCTGCCCGCCAACGTCAGCTTCGTGCTGGTGC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGGCTGCAGTGAGCTCTaGACCAGTCTGGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVGCSEL*TSLGDR
Trigger: CCTGTCGCCCAGACTGGTGCAGAGCTCACTGCAGCC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGCACCAGCATCCCCGTaGAAGGGTACCGCCCGTGAT +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVAPASP*KGTARD
Trigger: ATCACGGGCGGTACCCTTCCACGGGGATGCTGGTGC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCTTGGTCGCGGGTTGCTaGTCCTGGGTCCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSLVAGC*SWVPGR
Trigger: CCGGCCCGGGACCCAGGACCAGCAACCCGCGACCAA...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCCACTTCCCTGAGAGGTaGGGACAGCCCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVHFPER*GQPSLW
Trigger: CCACAGGCTGGGCTGTCCCCACCTCTCAGGGAAGTG...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTGGTCCCCCAGTCTCGTaGTTGGCGGGGCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPGPPVS*LAGHSR
Trigger: TCTGCTGTGCCCCGCCAATCACGAGACTGGGGGACC...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCAGGCGGAGCTTGCAGTaGGCGGACATAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVRRSLQ*ADIAPL
Trigger: CAGTGGTGCTATGTCCGCTCACTGCAAGCTCCGCCT...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCGAGGCCCGCGCCATaGTCTCCTCCTCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPPRPAP*SPPQKA
Trigger: CGCTTTCTGAGGAGGAGAGCATGGCGCGGGCCTCGG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGCAAAGCTCCTACTGTaGCTGTGGGGTCCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVAKLLL*LWGPLA
Trigger: CGCCAGAGGACCCCACAGCCACAGTAGGAGCTTTGC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGTCCCTTGGGATTGCTaGCTGCCAGCTCTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVVPWDC*LPALGV
Trigger: GACCCCTAGAGCTGGCAGCCAGCAATCCCAAGGGAC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGGAACCCCTGAGCACTaGCTGTGTGCCGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVGTPEH*LCAVGI
Trigger: GATTCCCACGGCACACAGCCAGTGCTCAGGGGTTCC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCAGGCACAGGTTGCAGTaGGCCGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVRHRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCGGCTCACTGCAACCTGTGCCT...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGTCAGGCGGGGCCCCTaGTTAGGGCTTCATCGGGTC +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSVRRGP*LGLHRV
Trigger: GACCCGATGAAGCCCTAAGCAGGGGCCCCGCCTGAC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGGGAGCACTTCATGGTaGCGGCAGGCGGGTGACGGT +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSGSTSW*RQAGDG
Trigger: ACCGTCACCCGCCTGCCGGCACCATGAAGTGCTCCC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGGGCCGGAGCCCCGGTaGCCGATAGATGGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGGPEPR*PIDGPE
Trigger: TTCCGGCCCATCTATCGGGCACCGGGGCTCCGGCCC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGCCACTGCGAGGAGCTaGTACCAGGAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVATARS*YQESSP
Trigger: TGGAGAGGATTCCTGGTAGCAGCTCCTCGCAGTGGC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTGGACTGCCATGGCCCTaGGAAGGGGCAGCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPGLPWP*EGAASL
Trigger: AAGAGACGCTGCCCCTTCGCAGGGCCATGGCAGTCC...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGCCCCATGCTGCCCTTaGAGGCAAGAACAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVAPCCP*RQEQGE
Trigger: TTCTCCCTGTTCTTGCCTGCAAGGGCAGCATGGGGC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCTCCTACTGTGGCTGTaGGGTCCTCTGGCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPLLLWL*GPLALG
Trigger: TCCCAGCGCCAGAGGACCCCACAGCCACAGTAGGAG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGACCGCAGCGCAGATTaGTGCCAGGCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGDRSAD*CQARPV
Trigger: GACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGCAAGAGGCGATGGGTaGAGGAGGAGGTACATGCAG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVARGDG*RRRYMQ
Trigger: CTGCATGTACCTCCTCCTCCACCCATCGCCTCTTGC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCCCAGGGGACTGCCATaGCCCTGCGAAGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHPRGLP*PCEGAA
Trigger: CGCTGCCCCTTCGCAGGGCCATGGCAGTCCCCTGGG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCGTGCCGGCAGGCGGGTaGCGGTCACCGTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCVPAGG*RSPWPL
Trigger: GAGTGGCCACGGTGACCGTCACCCGCCTGCCGGCAC...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCCCATCCAGGGCCCCTaGGTCCAGGTAGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHPIQGP*VQVGER
Trigger: ACGCTCCCCTACCTGGACTCAGGGGCCCTGGATGGG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCCAACGGCCAGGAAGCTaGCTGGTGGTGTCAACTAAG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVQRPGS*LVVSTK
Trigger: CTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTG...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTGTGGAGGCAGGGCTGTaGCAGAGGGGAAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPVEAGL*QRGKPD
Trigger: GTCAGGTTTTCCCCTCTGGCACAGCCCTGCCTCCAC...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCCGGGAGGCGGAGCTTaGAATGAGCCGAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSPGGGA*NEPRSH
Trigger: GTGGGATCTCGGCTCATTGCAAGCTCCGCCTCCCGG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGTGCTGGGCTTGGTCCTaGCCCCGGACAGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGCWAWS*PRTALR
Trigger: CCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCA...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCCCTCTGGACGTCCGGTaGAAGATCCATGTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVPLDVR*KIHVLS
Trigger: CGAGAGAACATGGATCTTCCACCGGACGTCCAGAGG...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCGTGGACAAGGCGCTaGCGATCCACAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPPWTRR*RSTEGP
Trigger: TGGACCTTCTGTGGATCGCCAGCGCCTTGTCCACGG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCCAGGAAGCACTGAGATaGGAGTGGCAAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVQEALR*EWQDWL
Trigger: CAGCCAGTCTTGCCACTCCCATCTCAGTGCTTCCTG...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CAA 72 bp AGGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTaGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RWDWGSRSDRFS*VGLHAPIRAGG
Trigger: CCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCCCTGGGCTGCAGCATaGTTGGTCGCGGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHPWAAA*LVAGCW
Trigger: CCAGCAACCCGCGACCAATCATGCTGCAGCCCAGGG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGCCCCCGAAGGCCATTaGTTGGAGGAGACTGGACAC +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSAPEGH*LEETGH
Trigger: GTGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTGAGGGCACACGTGAGTaGCAGCACCTTGCACTGAAG +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPEGTRE*QHLALK
Trigger: CTTCAGTGCAAGGTGCTGTCACTCACGTGTGCCCTC...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCTGGCCCAAAACCTCTaGCAGAGGAGGGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSLAQNL*QRRGAR
Trigger: TCTGGCTCCCCTCCTCTGGCAGAGGTTTTGGGCCAG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTGGGAGGTCAGTCCATTaGAGCCCTCTAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPGRSVH*SPLVPW
Trigger: CCAAGGGACTAGAGGGCTGCAATGGACTGACCTCCC...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCAGACGCCCCTGGGCTaGAGCATGATTGGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHQTPLG*SMIGRG
Trigger: CCCGCGACCAATCATGCTGCAGCCCAGGGGCGTCTG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGTTCCCTCAGCCAGCTaGAGGAACCTACCAACGGCC +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSVPSAS*RNLPTA
Trigger: GGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAAC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCAGGAGGCACAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPPGGTG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTGTGCCTCCTGG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCCTGAGGCCCCATGCTaGCCTTGCAGGCAAGAACAG +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSPEAPC*PCRQEQ
Trigger: CTGTTCTTGCCTGCAAGGGCAGCATGGGGCCTCAGG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGTAGCCTGCCTATTCTaGCACCACATGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVVACLF*HHMQRA
Trigger: TGCCCTTTGCATGTGGTGCCAGAATAGGCAGGCTAC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGCAGGGAGCACTTCATaGTGCCGGCAGGCGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHAGSTS*CRQAGD
Trigger: GTCACCCGCCTGCCGGCACCATGAAGTGCTCCCTGC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCCCCAGTCTCGTGATTaGCGGGGCACAGCAGACGCC +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGPQSRD*RGTADA
Trigger: GGCGTCTGCTGTGCCCCGCCAATCACGAGACTGGGG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCCCCAGTCTCGTGATTaGCGGGGCACAGCAGACGCC +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHPQSRD*RGTADA
Trigger: GGCGTCTGCTGTGCCCCGCCAATCACGAGACTGGGG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCCTTTTCCCAGCCCGCTaGGGGGCCAGCCACGGCGTA +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCLFPAR*GASHGV
Trigger: TACGCCGTGGCTGGCCCCTCAGCGGGCTGGGAAAAG...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGTGCCGGCAGGCGGGTaGCGGTCACCGTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQVPAGG*RSPWPL
Trigger: GAGTGGCCACGGTGACCGTCACCCGCCTGCCGGCAC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCTGGTCTTGAACTCCTaGCCTCGTGATTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPLVLNS*PRDSPA
Trigger: GGCAGGTGAATCACGAGGTCAGGAGTTCAAGACCAG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGGGAGGTCAGTCCATTaGAGCCCTCTAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSGRSVH*SPLVPW
Trigger: CCAAGGGACTAGAGGGCTGCAATGGACTGACCTCCC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGTGGCAGGGGTCCCTTaGCACGCCCTCCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHVAGVP*HALPHV
Trigger: TACATGAGGGAGGGCGTGGCAAGGGACCCCTGCCAC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCCACCGGCATCGCCCATaGAGCGGCGACAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCHRHRP*SGDRHS
Trigger: GCTGTGCCTGTCGCCGCTGCATGGGCGATGCCGGTG...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCCGGCTGCGAGCTCTaGCAGCTCAGAATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPPGCEL*QLRICK
Trigger: TTTGCAAATTCTGAGCTGGCAGAGCTCGCAGCCGGG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCTCCTACTGTGGCTGTaGGGTCCTCTGGCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGLLLWL*GPLALG
Trigger: TCCCAGCGCCAGAGGACCCCACAGCCACAGTAGGAG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTATCATCCACCACCTCTaGACGTCCGGTGGAAGATCC +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPIIHHL*TSGGRS
Trigger: GGATCTTCCACCGGACGTCCAGAGGTGGTGGATGAT...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACATCGGATCTGCCCCGTaGACAAGGCGCTGGCGATCC +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHIGSAP*TRRWRS
Trigger: GGATCGCCAGCGCCTTGTCCACGGGGCAGATCCGAT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCTTGATTGGAGGAGACTaGACACAGCGCCGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVLIGGD*TQRRKF
Trigger: AAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAA...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGACAGCGCGGCCGAGGTaGGACTGGGGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQTARPR*DWGSRS
Trigger: GCTGCGGGACCCCCAGTCCCACCTCGGCCGCGCTGT...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTTGGGAGTGGCAAGACTaGCTGAGGCCTAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPWEWQD*LRPSSL
Trigger: TAGAGAGCTAGGCCTCAGCCAGTCTTGCCACTCCCA...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGCACTGAGATGGGAGTaGCAAGACTGGCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSALRWE*QDWLRP
Trigger: AGGCCTCAGCCAGTCTTGCCACTCCCATCTCAGTGC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGTGGGGGAGGGTATCTaGGAGTCATCTCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHVGEGI*ESSRPS
Trigger: GGAGGGGCGAGATGACTCCCAGATACCCTCCCCCAC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCCAGGAGGTGGAGGTTaGGATGAGCCGACATCGGGC +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHPGGGG*DEPTSG
Trigger: GCCCGATGTCGGCTCATCCCAACCTCCACCTCCTGG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCTCACAGGCTTCCCTCTaGAGAGAACCAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSSQASL*REPGCQ
Trigger: CTGGCAGCCTGGTTCTCTCCAGAGGGAAGCCTGTGA...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTAACTCTTCCCTTTCATaGTCTCCAGTGCGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPNSSLS*SPVRCP
Trigger: CGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTT...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTACTTTTGGGGTCTCCTaGCTGCTTCCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPTFGVS*LLPAAA
Trigger: TGCAGCTGCTGGAAGCAGCCAGGAGACCCCAAAAGT...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
3UTR CAA 72 bp GGGATTGAGCGGCCGCTGGCCCGCCCCCGAAGGCCATaGATTGGAGGAGACTGGACACAGCGCCGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GIERPLARPRRP*IGGDWTQRRKF
Trigger: AAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGCGGGCCAGCGGCCGCTCAATCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGTGGCCAGCATGTCGATaGTGTGGGCCTCGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGWPACR*CGPRSP
Trigger: CGGACTTCGAGGCCCACATCATCGACATGCTGGCCA...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTTTCCGCAGTAGGTCTTaGCCTTCTGCTTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPFRSRS*PSASHL
Trigger: CAGATGGGAAGCAGAAGGGCAAGACCTACTGCGGAA...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTTATTCTGGCACCACATaGAAAGGGCATAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPYSGTT*KGHRGT
Trigger: CGTGCCCCTATGCCCTTTGCATGTGGTGCCAGAATA...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCACCAGCTTCACCCGGTaGGTCCCATCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCTSFTR*VPSRAP
Trigger: AGGGGCCCTGGATGGGACGCACCGGGTGAAGCTGGT...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGACAGGCACAGCTCTTaGCCGAGAGCCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGDRHSS*PRASPC
Trigger: GCAAGGAGAGGCTCTCGGGCAAGAGCTGTGCCTGTC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCTCATGATGAAGTTGTaGCCGTCCACGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSLMMKL*PSTSCP
Trigger: TGGGCAGGACGTGGACGGGCACAACTTCATCATGAG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGAGGCCCGGCTCAGTTaGCCCGGTAGACTTCGATCT +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGEARLS*PGRLRS
Trigger: AGATCGAAGTCTACCGGGGCAACTGAGCCGGGCCTC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCGGCCGGCTCCCGGCTaGGAGCTCTGCCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQRPAPG*ELCQLR
Trigger: TCTGAGCTGGCAGAGCTCGCAGCCGGGAGCCGGCCG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCGGCCGGCTCCCGGCTaGGAGCTCTGCCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQRPAPG*ELCQLR
Trigger: TCTGAGCTGGCAGAGCTCGCAGCCGGGAGCCGGCCG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGCCATATGTTTCTTCTaGTTCACAGGCTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVAICFF*FTGFPL
Trigger: CAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCACTATGGACACTGACTaGCCCCCACAGCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSTMDTD*PPQHSL
Trigger: CAGAGAGTGCTGTGGGGGGCAGTCAGTGTCCATAGT...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTGTCGGGCGCCAGGCTaGCGCAGCACGACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCCRAPG*RSTTLE
Trigger: TTCTAGGGTCGTGCTGCGGCAGCCTGGCGCCCGACA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCGGGGTCCTCTGGCGCTaGGAACAGCTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSGVLWR*EQLLFS
Trigger: GCTGAACAGCAGCTGTTCCCAGCGCCAGAGGACCCC...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTGCAGCAGGGGACAGTaGCAGGGGTCCCTTGCCACG +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCCSRGQ*QGSLAT
Trigger: CGTGGCAAGGGACCCCTGCCACTGTCCCCTGCTGCA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCTCGCCAGGCACTATCTaGAACAGCTTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSSPGTI*NSFSST
Trigger: GGTGCTGGAGAAGCTGTTCCAGATAGTGCCTGGCGA...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGCACAGCGCCGGCACTaGTGGGGGTCCCGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLAQRRH*WGSRKR
Trigger: CCGCTTCCGGGACCCCCACCAGTGCCGGCGCTGTGC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGTCAGGGACCTAAGCTaGGTTCAGCCATGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSVRDLS*VQPCKQ
Trigger: CTGCTTGCATGGCTGAACCCAGCTTAGGTCCCTGAC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCAATGAACTCCTCTCCTaGAGGAAACTCAAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVNELLS*RKLKRR
Trigger: TCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATT...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCACTGAGGCAGGAGAATaGCGTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSTEAGE*REPGRR
Trigger: CCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGT...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTTGGGAGGCCAAGGTaGGCAGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLGRPR*ADHEVR
Trigger: CCTGACCTCGTGATCTGCCCACCTTGGCCTCCCAAG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CAA 72 bp GCCGGCTCCCGGCTGCGAGCTCTGCCAGCTCAGAATTaGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGSRLRALPAQN*QRICGLATHGS
Trigger: GCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGCAGAGCTCGCAGCCGGGAGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCGGCCACCTATCTCCTaGGGCCCGCAAAGACCGCCC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQRPPIS*GPQRPP
Trigger: GGGCGGTCTTTGCGGGCCTCAGGAGATAGGTGGCCG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCGGCCACCTATCTCCTaGGGCCCGCAAAGACCGCCC +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQRPPIS*GPQRPP
Trigger: GGGCGGTCTTTGCGGGCCTCAGGAGATAGGTGGCCG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTAGGAATCCTCTCCAATaGACTCCTCTCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPRNPLQ*TPLLEE
Trigger: TTCCTCCAGGAGAGGAGTTCATTGGAGAGGATTCCT...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACTTAGATGCACTTCCCTaGGAGGTGGGGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLDALP*EVGTAQ
Trigger: CTGGGCTGTCCCCACCTCTCAGGGAAGTGCATCTAA...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGATCAGAGGGTGGACATaGCCAAGGGCTCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGIRGWT*PRALPS
Trigger: AGAGGGCAGAGCCCTTGGTCATGTCCACCCTCTGAT...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCCGGCTGCCAACATCCTaGTCAAAGCCCACGGTTGGC +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSRLPTS*SKPTVG
Trigger: GCCAACCGTGGGCTTTGAGCAGGATGTTGGCAGCCG...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGGAGGAGGAGGTACATaGAGCGGGCAGCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQGGGGT*SGQPGP
Trigger: TGGGCCCGGCTGCCCGCTGCATGTACCTCCTCCTCC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTAATTTGCAAAGAATCTaGGGTTTGGCCACCCACGGC +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPNLQRI*GLATHG
Trigger: GCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATT...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCCTAACAAAGTCCCCTaGCGGTCCCTGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHPNKVP*RSLFPQ
Trigger: CTGAGGGAACAGGGACCGGCAGGGGACTTTGTTAGG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGAGCCTGTCAGTGCCTaGAGAGGCCTCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHEPVSA*RGLSQS
Trigger: TGATTGGGAGAGGCCTCTGCAGGCACTGACAGGCTC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCATCGGATCTGCCCCGTaGACAAGGCGCTGGCGATCC +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCIGSAP*TRRWRS
Trigger: GGATCGCCAGCGCCTTGTCCACGGGGCAGATCCGAT...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTAGTCACATGATTGGCTaGGAGAAACAGAAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPSHMIG*EKQKLR
Trigger: GCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACT...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGTGGAAATTGGGCTGTaGAGGCAGGGCTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHVEIGL*RQGCAR
Trigger: TCTGGCACAGCCCTGCCTCCACAGCCCAATTTCCAC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCAAAATTATCCGGGAGTaGTGGTGCATGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVKIIRE*WCMPVI
Trigger: GATTACAGGCATGCACCACCACTCCCGGATAATTTT...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGTGGGACTCCAGGGCCTaGAGGACTAGATTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGWDSRA*RTRLAQ
Trigger: CTGGGCTAATCTAGTCCTCCAGGCCCTGGAGTCCCA...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGCCAGACCCCAACCCTaGGAGGACAAAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGARPQP*EDKNRK
Trigger: CTTCCTGTTTTTGTCCTCTCAGGGTTGGGGTCTGGC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGTGGCTGTCCTGTCCCTaGGTCAGGCGGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQWLSCP*VRRGPC
Trigger: GCAGGGGCCCCGCCTGACTCAGGGACAGGACAGCCA...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGAGAGCCTCTCCTTGCTaGGGCGCTGCAGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQRASPC*GAAGRH
Trigger: ATGCCGGCCTGCAGCGCCTCAGCAAGGAGAGGCTCT...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCCCACGGTTGGCGCCTaGTTCATCCTCATGATGAAG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGPTVGA*FILMMK
Trigger: CTTCATCATGAGGATGAATCAGGCGCCAACCGTGGG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCGCCAAAGGGGGTGGATaGCCTGTGGTCAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCAKGGG*PVVRSS
Trigger: CGAACTCCTGACCACAGGTCATCCACCCCCTTTGGC...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGGGACTTGGGTTCCATaGAAGTGTTGTCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHGTWVP*KCCPTS
Trigger: GGAGGTGGGACAACACTTGCATGGAACCCAAGTCCC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGTCAGGCGGGGCCCCTaGTTAGGGCTTCATCGGGTC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQVRRGP*LGLHRV
Trigger: GACCCGATGAAGCCCTAAGCAGGGGCCCCGCCTGAC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCGAGGCCCGGCTCAGTTaGCCCGGTAGACTTCGATCT +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCEARLS*PGRLRS
Trigger: AGATCGAAGTCTACCGGGGCAACTGAGCCGGGCCTC...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCCCTAACAAAGTCCCCTaGCGGTCCCTGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSPNKVP*RSLFPQ
Trigger: CTGAGGGAACAGGGACCGGCAGGGGACTTTGTTAGG...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCGCAGCCCAGGGGACTaGCATGGCCCTGCGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQRSPGD*HGPAKG
Trigger: CCCCTTCGCAGGGCCATGGCAGTCCCCTGGGCTGCG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACTTTCATGGTCTCCAGTaGGGTGCCCGTGGTAACAGC +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHFHGLQ*GARGNS
Trigger: GCTGTTACCACGGGCACCGCACTGGAGACCATGAAA...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACTTGGGGTCTCCTGGCTaGTTCCAGCAGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLGSPG*FQQLHT
Trigger: TGTATGCAGCTGCTGGAAGCAGCCAGGAGACCCCAA...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACTGTTGTCCCACCTCCTaGCCCAAAACCTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHCCPTS*PKTSAR
Trigger: TCTGGCAGAGGTTTTGGGCCAGGAGGTGGGACAACA...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGTCAGGGACCTAAGCTaGGTTCAGCCATGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGVRDLS*VQPCKQ
Trigger: CTGCTTGCATGGCTGAACCCAGCTTAGGTCCCTGAC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCATTATGGGCTGGGTGTaGTCAAACATTGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSIMGWV*SNIGRP
Trigger: TGGCCTCCCAATGTTTGACCACACCCAGCCCATAAT...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCCTTGGGAGGCCAAGGTaGGCAGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCLGRPR*ADHEVR
Trigger: CCTGACCTCGTGATCTGCCCACCTTGGCCTCCCAAG...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTGTGGTTGCTGGGCTTaGTCCTGCCCCCGGACAGCC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQCGCWA*SCPRTA
Trigger: GGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTAGAGCCTCTCCTTGCTaGGGCGCTGCAGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCRASPC*GAAGRH
Trigger: ATGCCGGCCTGCAGCGCCTCAGCAAGGAGAGGCTCT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCTCATTGGTGTTGTGTaGCTTGAACTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGLIGVV*LELGLQ
Trigger: CTGCAGCCCCAGTTCAAGTCACACAACACCAATGAG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCCCTGGGCTGCAGCATaGTTGGTCGCGGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLPWAAA*LVAGCW
Trigger: CCAGCAACCCGCGACCAATCATGCTGCAGCCCAGGG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCAGGCACAGGTTGCAGTaGGCCGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCRHRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCGGCTCACTGCAACCTGTGCCT...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCCACTCAATGAACCATaGACAGTCCTGTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHPLNEP*TVLSAP
Trigger: CGGAGCTGACAGGACTGTTCATGGTTCATTGAGTGG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGAAATAATGTGCGGATaGATCACACGGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGEIMCG*ITRAPG
Trigger: GCCTGGTGCCCGTGTGATTCATCCGCACATTATTTC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCGGGACTTGGGTTCCATaGAAGTGTTGTCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSGTWVP*KCCPTS
Trigger: GGAGGTGGGACAACACTTGCATGGAACCCAAGTCCC...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCAGCCACGGCGTAGCCTaGCTATTCTGGCACCACATG +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCSHGVA*LFWHHM
Trigger: CATGTGGTGCCAGAATAGGCAGGCTACGCCGTGGCT...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGGTAGACTTCGATCTTaGTGGCCTTGGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHGRLRS*WPWPAC
Trigger: ACATGCTGGCCAAGGCCAGCAAGATCGAAGTCTACC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCCGAGGCCCGCGCCATaGTCTCCTCCTCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCPRPAP*SPPQKA
Trigger: CGCTTTCTGAGGAGGAGAGCATGGCGCGGGCCTCGG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCAGCTGGGTTCAGCCATaGAAGCAGCTTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSSWVQP*KQLPGG
Trigger: TCCACCTGGAAGCTGCTTGCATGGCTGAACCCAGCT...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCCAACGGCCAGGAAGCTaGCTGGTGGTGTCAACTAAG +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSQRPGS*LVVSTK
Trigger: CTTAGTTGACACCACCAGGCAGCTTCCTGGCCGTTG...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGGCTGCAGTGAGCTCTaGACCAGTCTGGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQGCSEL*TSLGDR
Trigger: CCTGTCGCCCAGACTGGTGCAGAGCTCACTGCAGCC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTTTCATGGTCTCCAGTaGGGTGCCCGTGGTAACAGC +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSFHGLQ*GARGNS
Trigger: GCTGTTACCACGGGCACCGCACTGGAGACCATGAAA...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGGGCTTCAGGGGACTTaGGTTCCATGCAAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHGLQGT*VPCKCC
Trigger: ACAACACTTGCATGGAACCCAAGTCCCCTGAAGCCC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGCAGCAGGGGACAGTaGCAGGGGTCCCTTGCCACG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLCSRGQ*QGSLAT
Trigger: CGTGGCAAGGGACCCCTGCCACTGTCCCCTGCTGCA...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGCAGGGAGCACTTCATaGTGCCGGCAGGCGGGTGAC +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCAGSTS*CRQAGD
Trigger: GTCACCCGCCTGCCGGCACCATGAAGTGCTCCCTGC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGCACAGCGCCGGCACTaGTGGGGGTCCCGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEAQRRH*WGSRKR
Trigger: CCGCTTCCGGGACCCCCACCAGTGCCGGCGCTGTGC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTTCTGTCCACCTGTCGTaGATATACTTGAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPSVHLS*IYLKKA
Trigger: AGCCTTCTTCAAGTATATCCACGACAGGTGGACAGA...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACAGACTTCGATCTTGCTaGCCTTGGCCAGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHRLRSC*PWPACR
Trigger: TCGACATGCTGGCCAAGGCCAGCAAGATCGAAGTCT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCACTTCCCTGAGAGGTaGGGACAGCCCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQHFPER*GQPSLW
Trigger: CCACAGGCTGGGCTGTCCCCACCTCTCAGGGAAGTG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTCACAGGCTTCCCTCTaGAGAGAACCAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCSQASL*REPGCQ
Trigger: CTGGCAGCCTGGTTCTCTCCAGAGGGAAGCCTGTGA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTTCATGAGCAGACAATaGGGCGGCCCCTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQFMSRQ*GGPSFP
Trigger: CGGGAACGAGGGGCCGCCTCATTGTCTGCTCATGAA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGAAGGTCCAGGACCTTaGAGGGCACCAGCACGAAGC +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQEGPGP*RAPARS
Trigger: GCTTCGTGCTGGTGCCCTTCAAGGTCCTGGACCTTC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGAAGGTCCAGGACCTTaGAGGGCACCAGCACGAAGC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQEGPGP*RAPARS
Trigger: GCTTCGTGCTGGTGCCCTTCAAGGTCCTGGACCTTC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTGGCCAGCATGTCGATaGTGTGGGCCTCGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQWPACR*CGPRSP
Trigger: CGGACTTCGAGGCCCACATCATCGACATGCTGGCCA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGGTCGAGGGCACACGTaGGTGACAGCACCTTGCACT +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQGRGHT*VTAPCT
Trigger: AGTGCAAGGTGCTGTCACTCACGTGTGCCCTCGACC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGACAGGAGAATGGTGTaGACCCGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQDRRMV*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGTC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCCAGGAAGGCCCTCCGTaGTTCACTTCATATGTTTAT +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSQEGPP*FTSYVY
Trigger: ATAAACATATGAAGTGAATCACGGAGGGCCTTCCTG...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTTATAGCAAAGACAGCTaGGATGTCAAACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PPPEADGSASPRPAPCSPYSKDS*DVKLFP
Trigger: AGGGAAGAGTTTGACATCTCAGCTGTCTTTGCTATA...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGGCCCCCGGACAGCCCTaGGGGCAGTTGTCTACATCC +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQAPGQP*GQLSTS
Trigger: GGATGTAGACAACTGCCCTCAGGGCTGTCCGGGGGC...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGGGCTGGCCGGTCTCTaGCCGCCCCTCTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVGLAGL*PPLFSR
Trigger: TCGAGAGAAGAGGGGCGGTCAGAGACCGGCCAGCCC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACGTGGGAAAACTCCGCTaGAGAGATCGAGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHVGKLR*RDRDPF
Trigger: GAAAGGATCTCGATCTCTGCAGCGGAGTTTTCCCAC...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGTGGCAGGGGTCCCTTaGCACGCCCTCCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLVAGVP*HALPHV
Trigger: TACATGAGGGAGGGCGTGGCAAGGGACCCCTGCCAC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCATAGGGGCACGTGCTaGAGCAGGGGACAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCHRGTC*SRGQWQ
Trigger: CTGCCACTGTCCCCTGCTGCAGCACGTGCCCCTATG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCGACTTGAACTGGGGCTaGAGCATCATCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCDLNWG*SIIHHL
Trigger: GAGGTGGTGGATGATGCTGCAGCCCCAGTTCAAGTC...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCAGAGCCCCGCAGGTTaGCCGAGTTCCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVQSPAG*PSSPPR
Trigger: CCGTGGTGGGGAACTCGGGCAACCTGCGGGGCTCTG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTCGAAGTCCGCGTCGTaGACGCCAGTCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQSKSAS*TPVFRN
Trigger: GTTCCGGAAGACTGGCGTGCACGACGCGGACTTCGA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACGCAGCGCAGATTGGTaGCAGGCCCGGCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPRSADW*QARPVP
Trigger: GGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGTGGAGGCAGGCGGCTTaGGGCGCGCAAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQWRQAA*GAQVSS
Trigger: AGAGGAGACTTGCGCGCCGCAAGCCGCCTGCCTCCA...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGGAAAATCTGGCTGGATaGTGGGACCTACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGENLAG*WDLPLP
Trigger: TGGAAGAGGTAGGTCCCAGCATCCAGCCAGATTTTC...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTTACAGGACAGCCACTaGGAGGAGCTGCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCLQDSH*EELLPG
Trigger: TCCTGGTAGCAGCTCCTCGCAGTGGCTGTCCTGTAA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQLGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAACCTCCGCCTCCCAA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACACTGGGCGCCCTGAGTaGAGATGCCATATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHTGRPE*RCHMFL
Trigger: AAGAAACATATGGCATCTGCACTCAGGGCGCCCAGT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCGTGTCCAATACCATCTaGGTCAGGCGAGCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSVSNTI*VRRACA
Trigger: AGCACAAGCTCGCCTGACCCAGATGGTATTGGACAC...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGGGGTCCTCTGGCGCTaGGAACAGCTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLGVLWR*EQLLFS
Trigger: GCTGAACAGCAGCTGTTCCCAGCGCCAGAGGACCCC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGTCCCTTGGGATTGCTaGCTGCCAGCTCTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQVPWDC*LPALGV
Trigger: GACCCCTAGAGCTGGCAGCCAGCAATCCCAAGGGAC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCATCATCCACCACCTCTaGACGTCCGGTGGAAGATCC +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCIIHHL*TSGGRS
Trigger: GGATCTTCCACCGGACGTCCAGAGGTGGTGGATGAT...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAACCGGTGCCCGATAGATaGGCCGGAAGGGTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEPVPDR*AGRVAA
Trigger: CGCCGCGACCCTTCCGGCCCATCTATCGGGCACCGG...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCGCGACCGCTTTTCTTTaGTGGGTCTGCACGCACCTA +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCATAFL*WVCTHL
Trigger: TAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGC...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGAGACGCAGGAAGCCCTaGGGGCGCAGCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQRRRKP*GRSHPT
Trigger: TGTGGGATGGCTGCGCCCCCAGGGCTTCCTGCGTCT...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCAAGCAGCTTCCAGGTaGAACCCCGGCCGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCQAASR*NPGREL
Trigger: AAGCTCGCGGCCGGGGTTCCACCTGGAAGCTGCTTG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCACGTCACTAAAGCTATaGGAAAGGAATGAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVTSLKL*ERNEKG
Trigger: ACCTTTTTCATTCCTTTCCCATAGCTTTAGTGACGT...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACAGTGAAACACACCTGTaGAGGCAGGGAACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHSETHL*RQGTQE
Trigger: TTCCTGAGTTCCCTGCCTCCACAGGTGTGTTTCACT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCCACTGCATTCCAGCCTaGGCAATGGAGAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCHCIPA*AMERDS
Trigger: GGAGTCTCTCTCCATTGCCCAGGCTGGAATGCAGTG...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAACCCAGGGGACTGCCATaGCCCTGCGAAGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEPRGLP*PCEGAA
Trigger: CGCTGCCCCTTCGCAGGGCCATGGCAGTCCCCTGGG...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGAGGAGGTGTGGTTGCTaGGCTTGGTCCTGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQRRCGC*AWSCPR
Trigger: CCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCT...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGAGCTTAACCAAAGAATaGGCCCCAGGCAAAGTTACC +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGSLTKE*APGKVT
Trigger: GGTAACTTTGCCTGGGGCTCATTCTTTGGTTAAGCT...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGAGGCGACAACGAGCTaGTTTTTAACCAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSEATTS*FLTKML
Trigger: AAGCATTTTGGTTAAAAATCAGCTCGTTGTCGCCTC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTGGAGACATCATGTTaGCAGAGGCCAAAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLETSC*QRPKWL
Trigger: TAACCACTTTGGCCTCTGTCAACATGATGTCTCCAG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGCCAAAGGGGGTGGATaGCCTGTGGTCAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLAKGGG*PVVRSS
Trigger: CGAACTCCTGACCACAGGTCATCCACCCCCTTTGGC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGCTTCCCATCTGAGGTaGTGGTCCCTTCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQASHLR*WSLLLV
Trigger: CACCAGGAGAAGGGACCAGCACCTCAGATGGGAAGC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTTCCGCAGTAGGTCTTaGCCTTCTGCTTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCFRSRS*PSASHL
Trigger: CAGATGGGAAGCAGAAGGGCAAGACCTACTGCGGAA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTAGGCTCTGCCTCTCCTaGCACCCTGGTGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVRLCLS*HPGEGE
Trigger: CTCCCCCTCACCAGGGTGGCAGGAGAGGCAGAGCCT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTACCAGCTTCACCCGGTaGGTCCCATCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVTSFTR*VPSRAP
Trigger: AGGGGCCCTGGATGGGACGCACCGGGTGAAGCTGGT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCGGTAGACTTCGATCTTaGTGGCCTTGGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCGRLRS*WPWPAC
Trigger: ACATGCTGGCCAAGGCCAGCAAGATCGAAGTCTACC...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGGAGGAGGAGGTACATaGAGCGGGCAGCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEGGGGT*SGQPGP
Trigger: TGGGCCCGGCTGCCCGCTGCATGTACCTCCTCCTCC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTTCAAGGGATTCTCCTaGCTCAGCCTTCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSFKGFS*LSLPSS
Trigger: GCTACTTGGAAGGCTGAGGCAGGAGAATCCCTTGAA...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCGCAGCCCAGGGGACTaGCATGGCCCTGCGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIRSPGD*HGPAKG
Trigger: CCCCTTCGCAGGGCCATGGCAGTCCCCTGGGCTGCG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTTCTTGCAAAGCTGGCTaGCTCGCCTCTCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCSCKAG*LASPQL
Trigger: GAGCTGGGGAGAGGCGAGGCAGCCAGCTTTGCAAGA...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGTGCCGTGGGAATCTTaGAAAGCTGGCTGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLVPWES*KAGCLA
Trigger: GGCGAGGCAGCCAGCTTTGCAAGATTCCCACGGCAC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGATGTTACCGTCAAAGTaGCTGTCAAACCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGMLPSK*LSNQSE
Trigger: CTCCGACTGGTTTGACAGCCACTTTGACGGTAACAT...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTCAGGGTACATGAAATaGTGGGTGGTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCSGYMK*WVVRLP
Trigger: TGGCAGCCGAACCACCCACCATTTCATGTACCCTGA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGAGCATGTCGATGATGTaGGCCTCGAAGTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQSMSMM*ASKSAS
Trigger: CGACGCGGACTTCGAGGCCCACATCATCGACATGCT...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCCGGTGCCCGATAGATaGGCCGGAAGGGTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIPVPDR*AGRVAA
Trigger: CGCCGCGACCCTTCCGGCCCATCTATCGGGCACCGG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTAGACGCAGGAAGCCCTaGGGGCGCAGCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVRRRKP*GRSHPT
Trigger: TGTGGGATGGCTGCGCCCCCAGGGCTTCCTGCGTCT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCCACTCCCGGCTTCCTaGAGACGCAGGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVPLPAS*RRRKPW
Trigger: CCAGGGCTTCCTGCGTCTCCAGGAAGCCGGGAGTGG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCAAAGAATCTGCGGTTTaGCCACCCACGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCKESAV*PPTAAS
Trigger: TGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTT...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCTGCGCCGTCACTGTTaGGGAGGGGGCTCTATTAGT +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQLRRHC*GGGSIS
Trigger: ACTAATAGAGCCCCCTCCCCAACAGTGACGGCGCAG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCTTCTACTTTCGGAATTaGAAAGAACGACACTCGAGC +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSFYFRN*KERHSS
Trigger: GCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAA...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGGTGGGGGAGGGTATCTaGGAGTCATCTCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQVGEGI*ESSRPS
Trigger: GGAGGGGCGAGATGACTCCCAGATACCCTCCCCCAC...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGGACAGCCCAGCCTGTaGCCACCCAAATGTATCGGA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQGQPSL*PPKCIG
Trigger: TCCGATACATTTGGGTGGCCACAGGCTGGGCTGTCC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTGGCATGGTGGAAATTaGGCTGTGGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQWHGGN*AVEAGL
Trigger: CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGCTGAGACAGGAGAATaGTGTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLAETGE*CEPGRR
Trigger: CCGCCTCCCGGGTTCACACCATTCTCCTGTCTCAGC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCCCCACAGCACTCTCTaGAGCCTGTCAGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLPHSTL*SLSVPA
Trigger: TGCAGGCACTGACAGGCTCCAGAGAGTGCTGTGGGG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGATAGCATCACTGTGTaGGACTCCAGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQDSITV*DSRAWR
Trigger: CCTCCAGGCCCTGGAGTCCCACACAGTGATGCTATC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTTGGCTGTCCTGTCCCTaGGTCAGGCGGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAWLSCP*VRRGPC
Trigger: GCAGGGGCCCCGCCTGACTCAGGGACAGGACAGCCA...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGCACCAGCACGAAGCTaGCGTTGGCGGGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVAPARS*RWRAGS
Trigger: AGAACCTGCCCGCCAACGTCAGCTTCGTGCTGGTGC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTTCCTCCGCCCGAGGCTaGCGGAAGTGCTTCGCCGAG +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELISSARG*RKCFAE
Trigger: CTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGGA...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCGCAGAGTCCAGGAATaGGGTGCCTCCTGTATAGGT +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQRRVQE*GASCIG
Trigger: ACCTATACAGGAGGCACCTCATTCCTGGACTCTGCG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTGGAACTGGGCGCCCTaGGTGCAGATGCCATATGTT +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQWNWAP*VQMPYV
Trigger: AACATATGGCATCTGCACTCAGGGCGCCCAGTTCCA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTTGTCGGGCGCCAGGCTaGCGCAGCACGACCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELICRAPG*RSTTLS
Trigger: ACTGAGGGTCGTGCTGCGGCAGCCTGGCGCCCGACA...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342907.3
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGCTTCCCATCTGAGGTaGTGGTCCCTTCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLASHLR*WSLLLV
Trigger: CACCAGGAGAAGGGACCAGCACCTCAGATGGGAAGC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCACCGGCATCGCCCATaGAGCGGCGACAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIHRHRP*SGDRHS
Trigger: GCTGTGCCTGTCGCCGCTGCATGGGCGATGCCGGTG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCTCATGATGAAGTTGTaGCCGTCCACGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQLMMKL*PSTSCP
Trigger: TGGGCAGGACGTGGACGGGCACAACTTCATCATGAG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCGGCTGCCAACATCCTaGTCAAAGCCCACGGTTGGC +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQRLPTS*SKPTVG
Trigger: GCCAACCGTGGGCTTTGAGCAGGATGTTGGCAGCCG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTTCAAGGGATTCTCCTaGCTCAGCCTTCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCFKGFS*LSLPSS
Trigger: GCTACTTGGAAGGCTGAGGCAGGAGAATCCCTTGAA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGGCTGTGGGGTCCTCTaGCGCTGGGAACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEGCGVL*RWEQLL
Trigger: CAGCAGCTGTTCCCAGCGCCAGAGGACCCCACAGCC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGAGCCCTCTAGTCCCTTaGGATTGCTGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLSPLVP*DCWLPA
Trigger: AGCTGGCAGCCAGCAATCCCAAGGGACTAGAGGGCT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGAGCATGTCGATGATGTaGGCCTCGAAGTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLSMSMM*ASKSAS
Trigger: CGACGCGGACTTCGAGGCCCACATCATCGACATGCT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGACCGCAGCGCAGATTaGTGCCAGGCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQADRSAD*CQARPV
Trigger: GACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGCTCTCCTCCAGGTCTaGCCAGCTACTAAGACGATC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQALLQV*PATKTI
Trigger: GATCGTCTTAGTAGCTGGCCAGACCTGGAGGAGAGC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGCAAGAGGCGATGGGTaGAGGAGGAGGTACATGCAG +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCARGDG*RRRYMQ
Trigger: CTGCATGTACCTCCTCCTCCACCCATCGCCTCTTGC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCAAGCAGCTTCCAGGTaGAACCCCGGCCGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVQAASR*NPGREL
Trigger: AAGCTCGCGGCCGGGGTTCCACCTGGAAGCTGCTTG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTGGGAGTGGCAAGACTaGCTGAGGCCTAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQWEWQD*LRPSSL
Trigger: TAGAGAGCTAGGCCTCAGCCAGTCTTGCCACTCCCA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTGCCTCCTGTATAGGTaGGGGAGGGTATCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQCLLYR*GRVSGS
Trigger: ACTCCCAGATACCCTCCCCCACCTATACAGGAGGCA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGTGGAAATTGGGCTGTaGAGGCAGGGCTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCVEIGL*RQGCAR
Trigger: TCTGGCACAGCCCTGCCTCCACAGCCCAATTTCCAC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGGCATGGTGGAAATTaGGCTGTGGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLWHGGN*AVEAGL
Trigger: CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCA...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTACTGAGGCAGGAGAATaGCGTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVTEAGE*REPGRR
Trigger: CCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGGGGTGGATGACCTGTaGTCAGGAGTTCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLGVDDL*SGVRDQ
Trigger: CTGGTCTCGAACTCCTGACCACAGGTCATCCACCCC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGGTGTGGTCAAACATTaGGAGGCCAAAGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQGVVKH*EAKGGG
Trigger: TCCACCCCCTTTGGCCTCCCAATGTTTGACCACACC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGGTGTGGTCAAACATTaGGAGGCCAAAGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQGVVKH*EAKGGG
Trigger: TCCACCCCCTTTGGCCTCCCAATGTTTGACCACACC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTTCTCCAGCCCACTTTTaGGGTCTCCTGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCSPAHF*GLLAAS
Trigger: GGAAGCAGCCAGGAGACCCCAAAAGTGGGCTGGAGA...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACAGCACGACCCTAGAATaGCAGAGAGGAGAAATAATG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHSTTLE*QRGEIM
Trigger: CATTATTTCTCCTCTCTGCCATTCTAGGGTCGTGCT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCAGCCTATCCTGCTGTaGGCTCACAGTAATCCCCTG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLQPILL*AHSNPL
Trigger: CAGGGGATTACTGTGAGCTCACAGCAGGATAGGCTG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGCCAGACCCCAACCCTaGGAGGACAAAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCARPQP*EDKNRK
Trigger: CTTCCTGTTTTTGTCCTCTCAGGGTTGGGGTCTGGC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCCCACGGTTGGCGCCTaGTTCATCCTCATGATGAAG +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCPTVGA*FILMMK
Trigger: CTTCATCATGAGGATGAATCAGGCGCCAACCGTGGG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTAGGCGGAGCTTGCAGTaGGCGGACATAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVRRSLQ*ADIAPL
Trigger: CAGTGGTGCTATGTCCGCTCACTGCAAGCTCCGCCT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTTTTTTGAGGCTGCAGTaGGCTCTGCACCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCFLRLQ*ALHQSG
Trigger: CCCAGACTGGTGCAGAGCTCACTGCAGCCTCAAAAA...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGTTAATTCCACACTCTaGGGACCAGGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCVNSTL*GPGWPR
Trigger: TCTGGGCCAGCCTGGTCCTCAGAGTGTGGAATTAAC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGTATAGCAAAGACAGCTaGGATGTCAAACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGYSKDS*DVKLFP
Trigger: AGGGAAGAGTTTGACATCTCAGCTGTCTTTGCTATA...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGAGCCACGGCGTAGCCTaGCTATTCTGGCACCACATG +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQSHGVA*LFWHHM
Trigger: CATGTGGTGCCAGAATAGGCAGGCTACGCCGTGGCT...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCAGAGCCCCGCAGGTTaGCCGAGTTCCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAQSPAG*PSSPPR
Trigger: CCGTGGTGGGGAACTCGGGCAACCTGCGGGGCTCTG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGGGTGGGTGGTTCGGCTaGCAACATCCTGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQGGWFG*QHPAQS
Trigger: GCTTTGAGCAGGATGTTGGCAGCCGAACCACCCACC...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGAGTCCAGGAATGAGGTaGCTCCTGTATAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLSPGMR*LLYRWG
Trigger: CCCCCACCTATACAGGAGGCACCTCATTCCTGGACT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTAGTCCAGGAATGAGGTaGCTCCTGTATAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCSPGMR*LLYRWG
Trigger: CCCCCACCTATACAGGAGGCACCTCATTCCTGGACT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACAATAAAAATGCGGGTTaGCTGTGGCATGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHNKNAG*LWHGGN
Trigger: ATTTCCACCATGCCACAGGCAACCCGCATTTTTATT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGGACTGCCATGGCCCTaGGAAGGGGCAGCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEGLPWP*EGAASL
Trigger: AAGAGACGCTGCCCCTTCGCAGGGCCATGGCAGTCC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGCTCCCCTCCAAATCTaGCTAGCGGTGCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVAPLQI*LAVLLT
Trigger: GGTCAGCAGCACCGCTAGGCAGATTTGGAGGGGAGC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTTGTTGTCCCACCTCCTaGCCCAAAACCTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCCCPTS*PKTSAR
Trigger: TCTGGCAGAGGTTTTGGGCCAGGAGGTGGGACAACA...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCCTCTGGACGTCCGGTaGAAGATCCATGTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLPLDVR*KIHVLS
Trigger: CGAGAGAACATGGATCTTCCACCGGACGTCCAGAGG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGGGTACATGAAATGGTaGGTGGTTCGGCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQGYMKW*VVRLPT
Trigger: TGTTGGCAGCCGAACCACCCACCATTTCATGTACCC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTCAGGGTACATGAAATaGTGGGTGGTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQSGYMK*WVVRLP
Trigger: TGGCAGCCGAACCACCCACCATTTCATGTACCCTGA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGGGCTGCAGCATGATTaGTCGCGGGTTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVGLQHD*SRVAGP
Trigger: AGGACCAGCAACCCGCGACCAATCATGCTGCAGCCC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCCGAAGGCCATTGATTaGAGGAGACTGGACACAGCG +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCPKAID*RRLDTA
Trigger: CGCTGTGTCCAGTCTCCTCCAATCAATGGCCTTCGG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGCTCTCCTCCAGGTCTaGCCAGCTACTAAGACGATC +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLALLQV*PATKTI
Trigger: GATCGTCTTAGTAGCTGGCCAGACCTGGAGGAGAGC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGACCGCTTTTCTTTGGTaGGTCTGCACGCACCTATCC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQTAFLW*VCTHLS
Trigger: GGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGT...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGAAAGAATCTGCGGTTTaGCCACCCACGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQKESAV*PPTAAS
Trigger: TGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTT...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAACCAGGAGGTGGAGGTTaGGATGAGCCGACATCGGGC +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEPGGGG*DEPTSG
Trigger: GCCCGATGTCGGCTCATCCCAACCTCCACCTCCTGG...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACAAATCTATTATGGGCTaGGTGTGGTCAAACATTGGG +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHKSIMG*VWSNIG
Trigger: CCCAATGTTTGACCACACCCAGCCCATAATAGATTT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCACTGCATTCCAGCCTaGGCAATGGAGAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCHCIPA*AMERDS
Trigger: GGAGTCTCTCTCCATTGCCCAGGCTGGAATGCAGTG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCTCTTCTCTCGACTGTaGATTATCGATGAGGTATTG +
Preference number: 4 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGLFSRL*IIDEVL
Trigger: CAATACCTCATCGATAATCCACAGTCGAGAGAAGAG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTGTCGTGGATATACTTaGAGAAGGCTGGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCCRGYT*RRLGCR
Trigger: TCTACAACCCAGCCTTCTTCAAGTATATCCACGACA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGGTCCCCCAGTCTCGTaGTTGGCGGGGCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAGPPVS*LAGHSR
Trigger: TCTGCTGTGCCCCGCCAATCACGAGACTGGGGGACC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGAGGAATCCTCTCCAATaGACTCCTCTCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQRNPLQ*TPLLEE
Trigger: TTCCTCCAGGAGAGGAGTTCATTGGAGAGGATTCCT...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTTTAGATGCACTTCCCTaGGAGGTGGGGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVLDALP*EVGTAQ
Trigger: CTGGGCTGTCCCCACCTCTCAGGGAAGTGCATCTAA...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGTTTTTGAGGCTGCAGTaGGCTCTGCACCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQFLRLQ*ALHQSG
Trigger: CCCAGACTGGTGCAGAGCTCACTGCAGCCTCAAAAA...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGTTCCCTGTCCTTGTTaGAGTCTCCAGCCCACTTTT +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQVPCPC*SLQPTF
Trigger: AAAAGTGGGCTGGAGACTTCAACAAGGACAGGGAAC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTGGCGCTGGGAACAGCTaGTGTTCAGCGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIGAGNS*CSAGHC
Trigger: ACAGTGCCCCGCTGAACAGCAGCTGTTCCCAGCGCC...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGTGGGAAAACTCCGCTaGAGAGATCGAGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQVGKLR*RDRDPF
Trigger: GAAAGGATCTCGATCTCTGCAGCGGAGTTTTCCCAC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACATAGGGGCACGTGCTaGAGCAGGGGACAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPHRGTC*SRGQWQ
Trigger: CTGCCACTGTCCCCTGCTGCAGCACGTGCCCCTATG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGTTACAGGACAGCCACTaGGAGGAGCTGCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQLQDSH*EELLPG
Trigger: TCCTGGTAGCAGCTCCTCGCAGTGGCTGTCCTGTAA...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCCGGGAGGCGGAGCTTaGAATGAGCCGAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIPGGGA*NEPRSH
Trigger: GTGGGATCTCGGCTCATTGCAAGCTCCGCCTCCCGG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTACTTCCTTGTCTGCTaGCTGTGGATGGGTAAAATA +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSYFLVC*LWMGKI
Trigger: TATTTTACCCATCCACAGGCAGCAGACAAGGAAGTA...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGGCCCAGATACATACTaGTCCTCAAGCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLGPDTY*SSSLTE
Trigger: CTCTGTGAGGCTTGAGGAGCAGTATGTATCTGGGCC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTTCAAGAAACGTAGCTaGCCCTCCATTTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQFKKRS*PSICGH
Trigger: GTGGCCACAAATGGAGGGGCAGCTACGTTTCTTGAA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAATCTGGAGCCTGTCAGTaGCTGCAGAGGCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGESGACQ*LQRPLP
Trigger: TGGGAGAGGCCTCTGCAGGCACTGACAGGCTCCAGA...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGCTCTGCCCTCTAGCTaGACAGATAGCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLALPSS*TDSITV
Trigger: CACAGTGATGCTATCTGTGCAGCTAGAGGGCAGAGC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTTGATTGGAGGAGACTaGACACAGCGCCGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQLIGGD*TQRRKF
Trigger: AAACTTCCGGCGCTGTGTCCAGTCTCCTCCAATCAA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGGCGACCGCTTTTCTTTaGTGGGTCTGCACGCACCTA +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQATAFL*WVCTHL
Trigger: TAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGC...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGGCCAGGAAGCTGCCTaGTGGTGTCAACTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQGQEAA*WCQLRK
Trigger: TTTTCTTAGTTGACACCACCAGGCAGCTTCCTGGCC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGAATGCGGGTTGCCTGTaGCATGGTGGAAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLNAGCL*HGGNWA
Trigger: AGCCCAATTTCCACCATGCCACAGGCAACCCGCATT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCAAATCTATTATGGGCTaGGTGTGGTCAAACATTGGG +
Preference number: 4 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSKSIMG*VWSNIG
Trigger: CCCAATGTTTGACCACACCCAGCCCATAATAGATTT...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCTTTAAAAATCTATTATaGGCTGGGTGTGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSFKNLL*AGCGQT
Trigger: TGTTTGACCACACCCAGCCCATAATAGATTTTTAAA...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTTGTCTGCTGCCTGTaGATGGGTAAAATACTTTTT +
Preference number: 4 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLVCCL*MGKILF
Trigger: AAAAAGTATTTTACCCATCCACAGGCAGCAGACAAG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTCTGTGTCAGGAGGTGTaGTTGCTGGGCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVLCQEV*LLGLVL
Trigger: CAGGACCAAGCCCAGCAACCACACCTCCTGACACAG...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCTCGATGAGGTATTGCTaGGTCCACTCAATGAACCAT +
Preference number: 4 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCSMRYC*VHSMNH
Trigger: ATGGTTCATTGAGTGGACCCAGCAATACCTCATCGA...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
3UTR CAA 72 bp TCACAGAGGCGGGAGAGGGGGACCTCCTCTTGGATTTaGTGGGTTGGTTGTTACCCAGGCATAGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: SQRRERGTSSWI*WVGCYPGIDLL
Trigger: CAGCAAGTCTATGCCTGGGTAACAACCAACCCACAAAATCCAAGAGGAGGTCCCCCTCTCCCGCCTCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
3UTR CAA 72 bp TCAAGCCTCACAGAGGCGGGAGAGGGGGACCTCCTCTaGGATTTTGTGGGTTGGTTGTTACCCAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: SSLTEAGEGDLL*DFVGWLLPRHR
Trigger: TCTATGCCTGGGTAACAACCAACCCACAAAATCCAAGAGGAGGTCCCCCTCTCCCGCCTCTGTGAGGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCCCTCTTTGGCGGCTTaGAATAATCCAGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQPSLAA*NNPVWS
Trigger: GCTCCAGACTGGATTATTTCAAGCCGCCAAAGAGGG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCTCATTGGTGTTGTGTaGCTTGAACTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQLIGVV*LELGLQ
Trigger: CTGCAGCCCCAGTTCAAGTCACACAACACCAATGAG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCCTCCTCAGAAAGCGTaGAAGAAAACCCTAACCCAA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQPPQKA*KKTLTQ
Trigger: TTGGGTTAGGGTTTTCTTTCACGCTTTCTGAGGAGG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTGACAGGAGAATGGTGTaGACCCGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIDRRMV*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGTC...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTTGGAACTGGGCGCCCTaGGTGCAGATGCCATATGTT +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVWNWAP*VQMPYV
Trigger: AACATATGGCATCTGCACTCAGGGCGCCCAGTTCCA...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGTAGCACTGACAGCCTaGGGCCCCATGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAVALTA*GPMLPL
Trigger: CAAGGGCAGCATGGGGCCTCAGGCTGTCAGTGCTAC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGGCGCTGGGAACAGCTaGTGTTCAGCGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAGAGNS*CSAGHC
Trigger: ACAGTGCCCCGCTGAACAGCAGCTGTTCCCAGCGCC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACTGGCCCAAAACCTCTaGCAGAGGAGGGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPLAQNL*QRRGAR
Trigger: TCTGGCTCCCCTCCTCTGGCAGAGGTTTTGGGCCAG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGACCTCATCACACACATaGAGGGCAAAGAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQTSSHT*RAKKST
Trigger: GGTGCTTTTCTTTGCCCTGCATGTGTGTGATGAGGT...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTTCGAAGTCCGCGTCGTaGACGCCAGTCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELISKSAS*TPVFRN
Trigger: GTTCCGGAAGACTGGCGTGCACGACGCGGACTTCGA...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTAGCTGGGTTCAGCCATaGAAGCAGCTTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVSWVQP*KQLPGG
Trigger: TCCACCTGGAAGCTGCTTGCATGGCTGAACCCAGCT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTGTGGAGGCAGGGCTGTaGCAGAGGGGAAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIVEAGL*QRGKPD
Trigger: GTCAGGTTTTCCCCTCTGGCACAGCCCTGCCTCCAC...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGGGCCCAGATACATACTaGTCCTCAAGCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQGPDTY*SSSLTE
Trigger: CTCTGTGAGGCTTGAGGAGCAGTATGTATCTGGGCC...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCGCCCTGAGTGCAGATaGCATATGTTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQRPECR*HMFLLL
Trigger: AAGCAGAAGAAACATATGGCATCTGCACTCAGGGCG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGACTGGGCGCCCTGAGTaGAGATGCCATATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLTGRPE*RCHMFL
Trigger: AAGAAACATATGGCATCTGCACTCAGGGCGCCCAGT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACAGCCTGAGGCCCCATaGTGCCCTTGCAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPQPEAP*CPCRQE
Trigger: TTCTTGCCTGCAAGGGCAGCATGGGGCCTCAGGCTG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGGGGCTTCAGGGGACTTaGGTTCCATGCAAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQGLQGT*VPCKCC
Trigger: ACAACACTTGCATGGAACCCAAGTCCCCTGAAGCCC...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTGGGCTGCAGCATGATTaGTCGCGGGTTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIGLQHD*SRVAGP
Trigger: AGGACCAGCAACCCGCGACCAATCATGCTGCAGCCC...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTAGTCACATGATTGGCTaGGAGAAACAGAAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCSHMIG*EKQKLR
Trigger: GCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAACTGCGCCGTCACTGTTaGGGAGGGGGCTCTATTAGT +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGELRRHC*GGGSIS
Trigger: ACTAATAGAGCCCCCTCCCCAACAGTGACGGCGCAG...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGAATGAACTCCTCTCCTaGAGGAAACTCAAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQNELLS*RKLKRR
Trigger: TCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATT...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGGGGTGGATGACCTGTaGTCAGGAGTTCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEGVDDL*SGVRDQ
Trigger: CTGGTCTCGAACTCCTGACCACAGGTCATCCACCCC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTCCTCTTGGATTTTGTaGGTTGGTTGTTACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQSSWIL*VGCYPG
Trigger: GCCTGGGTAACAACCAACCCACAAAATCCAAGAGGA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTAGGGGGACCTCCTCTTaGATTTTGTGGGTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCRGTSS*ILWVGC
Trigger: ACAACCAACCCACAAAATCCAAGAGGAGGTCCCCCT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATGTCAGCTCCGCCGTTaGGGGAGAACCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPCQLRR*GRTWLC
Trigger: ACACAGCCAGGTTCTCCCCCAACGGCGGAGCTGACA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGCCCCCGAAGGCCATTaGTTGGAGGAGACTGGACAC +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAAPEGH*LEETGH
Trigger: GTGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTAAATGTATCGGAGCCTaGTGGATACCTGGAGACATC +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCKCIGA*WIPGDI
Trigger: GATGTCTCCAGGTATCCATCAGGCTCCGATACATTT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGATAAGCAACCAGGAGTaGAACACACCTGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQISNQE*NTPVEA
Trigger: TGCCTCCACAGGTGTGTTTCACTCCTGGTTGCTTAT...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAACTGGTCTTGAACTCCTaGCCTCGTGATTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGELVLNS*PRDSPA
Trigger: GGCAGGTGAATCACGAGGTCAGGAGTTCAAGACCAG...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCAGGAAGGCCCTCCGTaGTTCACTTCATATGTTTAT +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQQEGPP*FTSYVY
Trigger: ATAAACATATGAAGTGAATCACGGAGGGCCTTCCTG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGACTGTGGATTATCGATaGGGTATTGCTGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLTVDYR*GIAGST
Trigger: AGTGGACCCAGCAATACCTCATCGATAATCCACAGT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGGGGCCAGCCTATCCTaGTGTGAGCTCACAGTAATC +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEGASLS*CELTVI
Trigger: GATTACTGTGAGCTCACAGCAGGATAGGCTGGCCCC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGACTTGAACTGGGGCTaGAGCATCATCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEDLNWG*SIIHHL
Trigger: GAGGTGGTGGATGATGCTGCAGCCCCAGTTCAAGTC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAATTTCTTTGGTGGGTCTaGACGCACCTATCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEFLWWV*THLSGQ
Trigger: CTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAA...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAAGCCCTCTAGTCCCTTaGGATTGCTGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPSPLVP*DCWLPA
Trigger: AGCTGGCAGCCAGCAATCCCAAGGGACTAGAGGGCT...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGCTTGAGTCACATGATTaGCTGGGAGAAACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQLESHD*LGETEA
Trigger: AGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAG...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAACCGAAGGCCATTGATTaGAGGAGACTGGACACAGCG +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEPKAID*RRLDTA
Trigger: CGCTGTGTCCAGTCTCCTCCAATCAATGGCCTTCGG...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCAGGAAGCTGCCTGGTaGTGTCAACTAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQQEAAW*CQLRKG
Trigger: CCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGAGCCTGATGGATACCTaGAGACATCATGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQSLMDT*RHHVDR
Trigger: TCTGTCAACATGATGTCTCCAGGTATCCATCAGGCT...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTTGTAATCCTACCATTTaGGAGGCCAAGGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVCNPTI*EAKAGG
Trigger: TCCGCCTGCCTTGGCCTCCCAAATGGTAGGATTACA...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTTCCTCTTGGATTTTGTaGGTTGGTTGTTACCCAGGC +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCSSWIL*VGCYPG
Trigger: GCCTGGGTAACAACCAACCCACAAAATCCAAGAGGA...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGAGGGGGACCTCCTCTTaGATTTTGTGGGTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQRGTSS*ILWVGC
Trigger: ACAACCAACCCACAAAATCCAAGAGGAGGTCCCCCT...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCAGCCTATCCTGCTGTaGGCTCACAGTAATCCCCTG +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIQPILL*AHSNPL
Trigger: CAGGGGATTACTGTGAGCTCACAGCAGGATAGGCTG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCTTCTGCTTCCCATCTaGGGTGCTGGTCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQALLLPI*GAGPFS
Trigger: GGAGAAGGGACCAGCACCTCAGATGGGAAGCAGAAG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTAAACAGGAAGCTCTGTaGGTGTGGGAAAACTCCGCT +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVKQEAL*VWENSA
Trigger: AGCGGAGTTTTCCCACACTCACAGAGCTTCCTGTTT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAACCCTCTTTGGCGGCTTaGAATAATCCAGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEPSLAA*NNPVWS
Trigger: GCTCCAGACTGGATTATTTCAAGCCGCCAAAGAGGG...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCCTCCTCAGAAAGCGTaGAAGAAAACCCTAACCCAA +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQPPQKA*KKTLTQ
Trigger: TTGGGTTAGGGTTTTCTTTCACGCTTTCTGAGGAGG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACGCAGAGTCCAGGAATaGGGTGCCTCCTGTATAGGT +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPRRVQE*GASCIG
Trigger: ACCTATACAGGAGGCACCTCATTCCTGGACTCTGCG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAGTTAATTCCACACTCTaGGGACCAGGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPVNSTL*GPGWPR
Trigger: TCTGGGCCAGCCTGGTCCTCAGAGTGTGGAATTAAC...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGCTGGGTCCACTCAATaGACCATGAACAGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEAGSTQ*TMNSPV
Trigger: GACAGGACTGTTCATGGTTCATTGAGTGGACCCAGC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTGGGGCCAGCCTATCCTaGTGTGAGCTCACAGTAATC +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIGASLS*CELTVI
Trigger: GATTACTGTGAGCTCACAGCAGGATAGGCTGGCCCC...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTTTTCTTTGGTGGGTCTaGACGCACCTATCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIFLWWV*THLSGQ
Trigger: CTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAA...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTACAGGTGCGCACCACTaGGCCTGGCTAATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVTGAHH*AWLIFV
Trigger: TACAAAAATTAGCCAGGCGCAGTGGTGCGCACCTGT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGCCACTGCGAGGAGCTaGTACCAGGAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAATARS*YQESSP
Trigger: TGGAGAGGATTCCTGGTAGCAGCTCCTCGCAGTGGC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCCAGGAGGCACAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAPGGTG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTGTGCCTCCTGG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGCTGCTTCCAGCAGCTaGATACAAGGCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAAASSS*IQGLSG
Trigger: GCCTGAGAGGCCTTGTATGCAGCTGCTGGAAGCAGC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTTATCGATGAGGTATTaGTGGGTCCACTCAATGAAC +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQLSMRY*WVHSMN
Trigger: GTTCATTGAGTGGACCCAGCAATACCTCATCGATAA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATCGCCAGGCACTATCTaGAACAGCTTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPSPGTI*NSFSST
Trigger: GGTGCTGGAGAAGCTGTTCCAGATAGTGCCTGGCGA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGATACTTGAAGAAGGCTaGGTTGTAGATCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: IPATREVEVGELGRRRLQILEEG*VVDLDL
Trigger: AAGGTCCAGATCTACAACCCAGCCTTCTTCAAGTAT...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAAGACTTCGATCTTGCTaGCCTTGGCCAGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGERLRSC*PWPACR
Trigger: TCGACATGCTGGCCAAGGCCAGCAAGATCGAAGTCT...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTTTGGTCGCGGGTTGCTaGTCCTGGGTCCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGLVAGC*SWVPGR
Trigger: CCGGCCCGGGACCCAGGACCAGCAACCCGCGACCAA...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGGAATCTTGCAAAGCTaGCTGCCTCGCCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAGILQS*LPRLSP
Trigger: TGGGGAGAGGCGAGGCAGCCAGCTTTGCAAGATTCC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR TCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTCTTTTCCCAGCCCGCTaGGGGGCCAGCCACGGCGTA +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGLFPAR*GASHGV
Trigger: TACGCCGTGGCTGGCCCCTCAGCGGGCTGGGAAAAG...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTCAACAGGTAGGCTGGTaGGGAGGCCTCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGQQVGW*GGLRPR
Trigger: CCTGGGCCGGAGGCCTCCTCACCAGCCTACCTGTTG...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCTCTTCAGGAAGCACTaGGATGGGAGTGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELILFRKH*DGSGKT
Trigger: AGTCTTGCCACTCCCATCTCAGTGCTTCCTGAAGAG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGCTATGGGAAAGGAATaGAAAAGGTATCAACTCACA +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQAMGKE*KRYQLT
Trigger: TGTGAGTTGATACCTTTTTCATTCCTTTCCCATAGC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTAGTGAGAAGGGGCATTaGTTCCTAATTCACACTCAA +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCSEKGH*FLIHTQ
Trigger: TTGAGTGTGAATTAGGAATCAATGCCCCTTCTCACT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTTATTCTGGCACCACATaGAAAGGGCATAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIYSGTT*KGHRGT
Trigger: CGTGCCCCTATGCCCTTTGCATGTGGTGCCAGAATA...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTACCTCATCACACACATaGAGGGCAAAGAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVTSSHT*RAKKST
Trigger: GGTGCTTTTCTTTGCCCTGCATGTGTGTGATGAGGT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCCCGGCTGCGAGCTCTaGCAGCTCAGAATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAPGCEL*QLRICK
Trigger: TTTGCAAATTCTGAGCTGGCAGAGCTCGCAGCCGGG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTAATAAAAATGCGGGTTaGCTGTGGCATGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCNKNAG*LWHGGN
Trigger: ATTTCCACCATGCCACAGGCAACCCGCATTTTTATT...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTACTTCCTTGTCTGCTaGCTGTGGATGGGTAAAATA +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLYFLVC*LWMGKI
Trigger: TATTTTACCCATCCACAGGCAGCAGACAAGGAAGTA...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGCCATATGTTTCTTCTaGTTCACAGGCTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVAICFF*FTGFPL
Trigger: CAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAAGGGGTCCCCCTCTTTaGCGGCTTGAAATAATCCAG +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPRGPPL*RLEIIQ
Trigger: CTGGATTATTTCAAGCCGCCAAAGAGGGGGACCCCT...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTAGGGGTCCCCCTCTTTaGCGGCTTGAAATAATCCAG +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIRGPPL*RLEIIQ
Trigger: CTGGATTATTTCAAGCCGCCAAAGAGGGGGACCCCT...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTATGTTACCGTCAAAGTaGCTGTCAAACCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVMLPSK*LSNQSE
Trigger: CTCCGACTGGTTTGACAGCCACTTTGACGGTAACAT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCTTGAGTCACATGATTaGCTGGGAGAAACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQLESHD*LGETEA
Trigger: AGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGAAAATTATCCGGGAGTaGTGGTGCATGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQKIIRE*WCMPVI
Trigger: GATTACAGGCATGCACCACCACTCCCGGATAATTTT...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATGTAATCCTACCATTTaGGAGGCCAAGGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPCNPTI*EAKAGG
Trigger: TCCGCCTGCCTTGGCCTCCCAAATGGTAGGATTACA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCTTGTCTGCTGCCTGTaGATGGGTAAAATACTTTTT +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQLVCCL*MGKILF
Trigger: AAAAAGTATTTTACCCATCCACAGGCAGCAGACAAG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTACTGGCTGTGTGCCGTaGGAATCTTGCAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQATGCVP*ESCKAG
Trigger: GCCAGCTTTGCAAGATTCCCACGGCACACAGCCAGT...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
3UTR CAA 72 bp ATTGGAGGAGACTGGACACAGCGCCGGAAGTTTTCCTaGAGTCACATGATTGGCTGGGAGAAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: IGGDWTQRRKFS*SHMIGWEKQKL
Trigger: GAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCTCCTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAAAATGTATCGGAGCCTaGTGGATACCTGGAGACATC +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEKCIGA*WIPGDI
Trigger: GATGTCTCCAGGTATCCATCAGGCTCCGATACATTT...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGCTATGGGAAAGGAATaGAAAAGGTATCAACTCACA +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLAMGKE*KRYQLT
Trigger: TGTGAGTTGATACCTTTTTCATTCCTTTCCCATAGC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTAGGCTCTGCCTCTCCTaGCACCCTGGTGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGRLCLS*HPGEGE
Trigger: CTCCCCCTCACCAGGGTGGCAGGAGAGGCAGAGCCT...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTAATTTGCAAAGAATCTaGGGTTTGGCCACCCACGGC +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELINLQRI*GLATHG
Trigger: GCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATT...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTTGGAGGCAGGCGGCTTaGGGCGCGCAAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGWRQAA*GAQVSS
Trigger: AGAGGAGACTTGCGCGCCGCAAGCCGCCTGCCTCCA...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTACAGGTGCGCACCACTaGGCCTGGCTAATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELITGAHH*AWLIFV
Trigger: TACAAAAATTAGCCAGGCGCAGTGGTGCGCACCTGT...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAACGCCCTGAGTGCAGATaGCATATGTTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGERPECR*HMFLLL
Trigger: AAGCAGAAGAAACATATGGCATCTGCACTCAGGGCG...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGTGTCCAATACCATCTaGGTCAGGCGAGCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAVSNTI*VRRACA
Trigger: AGCACAAGCTCGCCTGACCCAGATGGTATTGGACAC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGATACTTGAAGAAGGCTaGGTTGTAGATCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQILEEG*VVDLDL
Trigger: AAGGTCCAGATCTACAACCCAGCCTTCTTCAAGTAT...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTACCGCTTTTCTTTGGTaGGTCTGCACGCACCTATCC +
Preference number: 4 (lower is better)
Translates to: AQTVARGKVLIPHSEDQATAFLW*VCTHLS
Trigger: GGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGT...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTGGCCAGGAAGCTGCCTaGTGGTGTCAACTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIGQEAA*WCQLRK
Trigger: TTTTCTTAGTTGACACCACCAGGCAGCTTCCTGGCC...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGACGTCACTAAAGCTATaGGAAAGGAATGAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQTSLKL*ERNEKG
Trigger: ACCTTTTTCATTCCTTTCCCATAGCTTTAGTGACGT...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTAGTGAAACACACCTGTaGAGGCAGGGAACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELISETHL*RQGTQE
Trigger: TTCCTGAGTTCCCTGCCTCCACAGGTGTGTTTCACT...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAATGTCGTGGATATACTTaGAGAAGGCTGGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGECRGYT*RRLGCR
Trigger: TCTACAACCCAGCCTTCTTCAAGTATATCCACGACA...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTAGCTTAACCAAAGAATaGGCCCCAGGCAAAGTTACC +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELISLTKE*APGKVT
Trigger: GGTAACTTTGCCTGGGGCTCATTCTTTGGTTAAGCT...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGCTCTATTAGTGGTTTaGGAGCTTCACAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEALLVV*ELHRSL
Trigger: AAGGCTTCTGTGAAGCTCTCAAACCACTAATAGAGC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAAAAATTAGCTGGGTGTaGTGGCACACCCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEKISWV*WHTPVI
Trigger: AATTACAGGGGTGTGCCACCACACCCAGCTAATTTT...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTTTAAAAATCTATTATaGGCTGGGTGTGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQFKNLL*AGCGQT
Trigger: TGTTTGACCACACCCAGCCCATAATAGATTTTTAAA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTTTCATGAGCAGACAATaGGGCGGCCCCTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGFMSRQ*GGPSFP
Trigger: CGGGAACGAGGGGCCGCCTCATTGTCTGCTCATGAA...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAAGTGAGAAGGGGCATTaGTTCCTAATTCACACTCAA +
Preference number: 4 (lower is better)
Translates to: RLDTAPEVFLESHDWLGESEKGH*FLIHTQ
Trigger: TTGAGTGTGAATTAGGAATCAATGCCCCTTCTCACT...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAGGTAAACGAGTCAAGTaGTTTTCCCTAAGCCACATG +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPGKRVK*FSLSHM
Trigger: CATGTGGCTTAGGGAAAATCACTTGACTCGTTTACC...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR GCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGACAGGCACAGCTCTTaGCCGAGAGCCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGDRHSS*PRASPC
Trigger: GCAAGGAGAGGCTCTCGGGCAAGAGCTGTGCCTGTC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGTTCCCTCAGCCAGCTaGAGGAACCTACCAACGGCC +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGVPSAS*RNLPTA
Trigger: GGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAAC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGACTGTTTGGCATAATTaGATTGCTTTTCATCAACAC +
Preference number: 4 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLTVWHN*IAFHQH
Trigger: GTGTTGATGAAAAGCAATGCAATTATGCCAAACAGT...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGCAAAGCTCCTACTGTaGCTGTGGGGTCCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGAKLLL*LWGPLA
Trigger: CGCCAGAGGACCCCACAGCCACAGTAGGAGCTTTGC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTCCGTGGACAAGGCGCTaGCGATCCACAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGPWTRR*RSTEGP
Trigger: TGGACCTTCTGTGGATCGCCAGCGCCTTGTCCACGG...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTAAAATTAGCTGGGTGTaGTGGCACACCCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIKISWV*WHTPVI
Trigger: AATTACAGGGGTGTGCCACCACACCCAGCTAATTTT...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGCTGAGACAGGAGAATaGTGTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGAETGE*CEPGRR
Trigger: CCGCCTCCCGGGTTCACACCATTCTCCTGTCTCAGC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTCTTCTGCTTCCCATCTaGGGTGCTGGTCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGLLLPI*GAGPFS
Trigger: GGAGAAGGGACCAGCACCTCAGATGGGAAGCAGAAG...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAGAGGCGACAACGAGCTaGTTTTTAACCAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPEATTS*FLTKML
Trigger: AAGCATTTTGGTTAAAAATCAGCTCGTTGTCGCCTC...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGGTGGGTGGTTCGGCTaGCAACATCCTGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGGGWFG*QHPAQS
Trigger: GCTTTGAGCAGGATGTTGGCAGCCGAACCACCCACC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGAGGTATCAACTCACATaGGCAAATAAATGGAAACAA +
Preference number: 4 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQRYQLT*ANKWKQ
Trigger: TTGTTTCCATTTATTTGCCCATGTGAGTTGATACCT...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTCAGGAAGCACTGAGATaGGAGTGGCAAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGQEALR*EWQDWL
Trigger: CAGCCAGTCTTGCCACTCCCATCTCAGTGCTTCCTG...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTTGCCTCCTGTATAGGTaGGGGAGGGTATCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGCLLYR*GRVSGS
Trigger: ACTCCCAGATACCCTCCCCCACCTATACAGGAGGCA...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGTAGCCTGCCTATTCTaGCACCACATGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGVACLF*HHMQRA
Trigger: TGCCCTTTGCATGTGGTGCCAGAATAGGCAGGCTAC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTAATGCGGGTTGCCTGTaGCATGGTGGAAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGNAGCL*HGGNWA
Trigger: AGCCCAATTTCCACCATGCCACAGGCAACCCGCATT...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR GCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAACTGTTTGGCATAATTaGATTGCTTTTCATCAACAC +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPTVWHN*IAFHQH
Trigger: GTGTTGATGAAAAGCAATGCAATTATGCCAAACAGT...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTCAGGAAGCTGCCTGGTaGTGTCAACTAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGQEAAW*CQLRKG
Trigger: CCCTTTTCTTAGTTGACACCACCAGGCAGCTTCCTG...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CCA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAAGGTATCAACTCACATaGGCAAATAAATGGAAACAA +
Preference number: 4 (lower is better)
Translates to: VQMPYVSSASQASLWREPRYQLT*ANKWKQ
Trigger: TTGTTTCCATTTATTTGCCCATGTGAGTTGATACCT...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR TCA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGCTCTATTAGTGGTTTaGGAGCTTCACAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LFLLFLLSELERTTLELGALLVV*ELHRSL
Trigger: AAGGCTTCTGTGAAGCTCTCAAACCACTAATAGAGC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CCA 90 bp CGCAGCTCTCTCGTCCGCCCGCCGTGGGCTAGTCCCGCCCTTGCCTaGCCCAACCCTCCCCGAGCGCCGCCGCCGCCGCCGCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: RSSLVRPPWASPALA*PNPPRAPPPPPPQP
Trigger: GGGCTGAGGCGGCGGCGGCGGCGGCGCTCGGGGAGGGTTGGGCCAGGCAAGGGCGGGACTAGCCCACGGCGGGCGGACGAGAGAGCTGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566097.1
CDS GCA 90 bp ATTGGTCGCGGGTTGCTGGTCCTGGGTCCCGGGCCGGAGCCCCGGTaGCCGATAGATGGGCCGGAAGGGTCGCGGCGAGGCCCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: IGRGLLVLGPGPEPR*PIDGPEGSRRGPAQ
Trigger: CTGAGCCGGGCCTCGCCGCGACCCTTCCGGCCCATCTATCGGGCACCGGGGCTCCGGCCCGGGACCCAGGACCAGCAACCCGCGACCAAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS CCA 90 bp GTTGCTGGTCCTGGGTCCCGGGCCGGAGCCCCGGTGCCCGATAGATaGGCCGGAAGGGTCGCGGCGAGGCCCGGCTCAGTTGCCCCGGTA +
Preference number: 5 (lower is better)
Translates to: VAGPGSRAGAPVPDR*AGRVAARPGSVAPV
Trigger: TACCGGGGCAACTGAGCCGGGCCTCGCCGCGACCCTTCCGGCCCATCTATCGGGCACCGGGGCTCCGGCCCGGGACCCAGGACCAGCAAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS CCA 90 bp CGTCGTCCGGACCCGTTAGCTCGCAGCTCTCTCGTCCGCCCGCCGTaGGCTAGTCCCGCCCTTGCCTGGCCCAACCCTCCCCGAGCGCCG +
Preference number: 5 (lower is better)
Translates to: RRPDPLARSSLVRPP*ASPALAWPNPPRAP
Trigger: CGGCGCTCGGGGAGGGTTGGGCCAGGCAAGGGCGGGACTAGCCCACGGCGGGCGGACGAGAGAGCTGCGAGCTAACGGGTCCGGACGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566097.1
CDS-3UTR CAA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCCGAGAGCCTCTCCTaGCTGAGGCGCTGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PPPEADGSASPRPAPCSPPESLS*LRRCRP
Trigger: CGGCCTGCAGCGCCTCAGCAAGGAGAGGCTCTCGGG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGCCGACATCGGGCCATaGCACTCCAGCCTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVADIGP*HSSLGN
Trigger: GTTACCCAGGCTGGAGTGCAATGGCCCGATGTCGGC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 90 bp TGCAGCGGCGACAGGCACAGCTCTTGCCCGAGAGCCTCTCCTTGCTaGGGCGCTGCAGGCCGGCATAGCCGGGCACCAGCTTCACCCGGT +
Preference number: 5 (lower is better)
Translates to: CSGDRHSSCPRASPC*GAAGRHSRAPASPG
Trigger: ACCGGGTGAAGCTGGTGCCCGGCTATGCCGGCCTGCAGCGCCTCAGCAAGGAGAGGCTCTCGGGCAAGAGCTGTGCCTGTCGCCGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCAGCCCTCTAGTCCCTaGGGATTGCTGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PPPEADGSASPRPAPCSPQPSSP*GLLAAS
Trigger: GCTGGCAGCCAGCAATCCCAAGGGACTAGAGGGCTG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCCAGAGCCCCGCAGGTaGCCCGAGTTCCCCACCACG +
Preference number: 5 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGPEPRR*PEFPTT
Trigger: CGTGGTGGGGAACTCGGGCAACCTGCGGGGCTCTGG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCTTGAGGTGGGTGAACTaGGGAGGCGGAGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVLRWVN*GGGGCS
Trigger: ACTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAA...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCCAGCTACTCGGGAGGTaGAGGTGGGTGAACTTGGGA +
Preference number: 5 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVQLLGR*RWVNLG
Trigger: TCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTG...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 90 bp GGCAGGCGGGTGACGGTCACCGTGGCCACTCTTTTCCCAGCCCGCTaGGGGGCCAGCCACGGCGTAGCCTGCCTATTCTGGCACCACATG +
Preference number: 5 (lower is better)
Translates to: GRRVTVTVATLFPAR*GASHGVACLFWHHM
Trigger: CATGTGGTGCCAGAATAGGCAGGCTACGCCGTGGCTGGCCCCTCAGCGGGCTGGGAAAAGAGTGGCCACGGTGACCGTCACCCGCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 90 bp AGGAACCACACCCGCAGGGAGCACTTCATGGTGCCGGCAGGCGGGTaGCGGTCACCGTGGCCACTCTTTTCCCAGCCCGCTGAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RNHTRREHFMVPAGG*RSPWPLFSQPAEGP
Trigger: TGGCCCCTCAGCGGGCTGGGAAAAGAGTGGCCACGGTGACCGTCACCCGCCTGCCGGCACCATGAAGTGCTCCCTGCGGGTGTGGTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 90 bp AGGACAGAACTCGAGTTCTTTCAGGGTCCCGCTCCCAGCTTCCTGTaGCCTCAGTCAGCGCCCGGCGCCGCGCGGGCCATGCTCGCCGCT +
Preference number: 5 (lower is better)
Translates to: RTELEFFQGPAPSFL*PQSAPGAARAMLAA
Trigger: AGCGGCGAGCATGGCCCGCGCGGCGCCGGGCGCTGACTGAGGTCACAGGAAGCTGGGAGCGGGACCCTGAAAGAACTCGAGTTCTGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS-3UTR CAA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTGGGGAGGTCAGTCCATaGCAGCCCTCTAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: PPPEADGSASPRPAPCSPGEVSP*QPSSPL
Trigger: CAAGGGACTAGAGGGCTGCAATGGACTGACCTCCCC...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCTCGATCTTGCTGGCCTaGGCCAGCATGTCGATGATG +
Preference number: 5 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVSILLA*ASMSMM
Trigger: CATCATCGACATGCTGGCCAAGGCCAGCAAGATCGA...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGCTCCGCCCGACCGCAGCGCAGATTGGTGCCAGGCCCGGCCGGTCCCCCAGTCGAGGGGGACCTCCTCTaGGATTTTGTGGGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: SSARPQRRLVPGPAGPPVEGDLL*DFVGWL
Trigger: CAACCAACCCACAAAATCCAAGAGGAGGTCCCCCTC...GACTGGGGGACCGGCCGGGCCTGGCACCAATCTGCGCTGCGGTCGGGCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCACGGGCACCAGGCTTaGTCCCAGCCCCACCCCAAG +
Preference number: 5 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGHGHQA*SQPHPK
Trigger: CTTGGGGTGGGGCTGGGACAAAGCCTGGTGCCCGTG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS TCA 90 bp ATAGCCGGGCACCAGCTTCACCCGGTGCGTCCCATCCAGGGCCCCTaGGTCCAGGTAGGGGAGCGTGGCCATGCTGTGGTGCGAGTAGGT +
Preference number: 5 (lower is better)
Translates to: IAGHQLHPVRPIQGP*VQVGERGHAVVRVG
Trigger: ACCTACTCGCACCACAGCATGGCCACGCTCCCCTACCTGGACTCAGGGGCCCTGGATGGGACGCACCGGGTGAAGCTGGTGCCCGGCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 90 bp GGAAGGCCACGGAGAGGAACCACACCCGCAGGGAGCACTTCATGGTaGCGGCAGGCGGGTGACGGTCACCGTGGCCACTCTTTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GRPRRGTTPAGSTSW*RQAGDGHRGHSFPS
Trigger: GCTGGGAAAAGAGTGGCCACGGTGACCGTCACCCGCCTGCCGGCACCATGAAGTGCTCCCTGCGGGTGTGGTTCCTCTCCGTGGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 90 bp AGCTCCGCCGTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTTaGTGGGCTTGGTCCTGCCCCCGGACAGCCCTGAGGGCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: SSAVGGEPGCVRRCG*WAWSCPRTALRAVV
Trigger: GACAACTGCCCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACGGCGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp GCAGGAAGGCCACGGAGAGGAACCACACCCGCAGGGAGCACTTCATaGTGCCGGCAGGCGGGTGACGGTCACCGTGGCCACTCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: AGRPRRGTTPAGSTS*CRQAGDGHRGHSFP
Trigger: GGGAAAAGAGTGGCCACGGTGACCGTCACCCGCCTGCCGGCACCATGAAGTGCTCCCTGCGGGTGTGGTTCCTCTCCGTGGCCTTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CCA 90 bp TGTCAGCTCCGCCGTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTaGTTGCTGGGCTTGGTCCTGCCCCCGGACAGCCCTGAGGGCAGT +
Preference number: 5 (lower is better)
Translates to: CQLRRWGRTWLCQEV*LLGLVLPPDSPEGS
Trigger: ACTGCCCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACGGCGGAGCTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACATGATTGGTCGCGGGTaGCTGGTCCTGGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHMIGRG*LVLGPG
Trigger: CCCGGGACCCAGGACCAGCAACCCGCGACCAATCAT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTGTCAGCTCCGCCGTaGGGGGAGAACCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLSAPP*GENLAV
Trigger: CACAGCCAGGTTCTCCCCCAACGGCGGAGCTGACAG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp TCCGCCGTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTTGCTaGGCTTGGTCCTGCCCCCGGACAGCCCTGAGGGCAGTTGTCTAC +
Preference number: 5 (lower is better)
Translates to: SAVGGEPGCVRRCGC*AWSCPRTALRAVVY
Trigger: GTAGACAACTGCCCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACGGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCAGCCCCAGCTGCAGTaGCGTAGGGGTCGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGQPQLQ*RRGRKA
Trigger: AGCTTTGCGACCCCTACGCAACTGCAGCTGGGGCTG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCTTGAGGTGGGTGAACTaGGGAGGCGGAGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSLRWVN*GGGGCS
Trigger: ACTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAA...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCTGATGCCTCTGACCTaGCCAGACAGTCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: PPPEADGSASPRPAPCSPLMPLT*PDSHRR
Trigger: CCTTCTGTGACTGTCTGGCAAGGTCAGAGGCATCAG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 90 bp GGCTCTGCCTCTCCTGCCACCCTGGTGAGGGGGAGGTCAGTCCATTaGAGCCCTCTAGTCCCTTGGGATTGCTGGCTGCCAGCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: GSASPATLVRGRSVH*SPLVPWDCWLPALG
Trigger: CCCTAGAGCTGGCAGCCAGCAATCCCAAGGGACTAGAGGGCTGCAATGGACTGACCTCCCCCTCACCAGGGTGGCAGGAGAGGCAGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 90 bp CGTCAAAGTGGCTGTCAAACCAGTCGGAGGCACCGGCATCGCCCATaGAGCGGCGACAGGCACAGCTCTTGCCCGAGAGCCTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: RQSGCQTSRRHRHRP*SGDRHSSCPRASPC
Trigger: GCAAGGAGAGGCTCTCGGGCAAGAGCTGTGCCTGTCGCCGCTGCATGGGCGATGCCGGTGCCTCCGACTGGTTTGACAGCCACTTTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCCAGCCCTCTAGTCCCTaGGGATTGCTGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSQPSSP*GLLAAS
Trigger: GCTGGCAGCCAGCAATCCCAAGGGACTAGAGGGCTG...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCCGACAGGCACAGCTCTaGCCCGAGAGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSRQAQL*PESLSL
Trigger: CAAGGAGAGGCTCTCGGGCAAGAGCTGTGCCTGTCG...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTTTGGTGTTGTGTGACTaGAACTGGGGCTGCAGCATC +
Preference number: 5 (lower is better)
Translates to: PPPEADGSASPRPAPCSPLVLCD*NWGCSI
Trigger: GATGCTGCAGCCCCAGTTCAAGTCACACAACACCAA...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCGCCGGAAGTTTTCCTaGAGTCACATGATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PPPEADGSASPRPAPCSPRRKFS*SHMIGW
Trigger: CCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGGTGGAGGCAGGCGGCTaGCGGCGCGCAAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQVEAGG*RRASLL
Trigger: GAGGAGACTTGCGCGCCGCAAGCCGCCTGCCTCCAC...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 90 bp CGGGTCTCTCCGTCACTAGCTAGGCCACAGAGGCTCTGCCTCTCCTaGCACCCTGGTGAGGGGGAGGTCAGTCCATTGCAGCCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: RVSPSLARPQRLCLS*HPGEGEVSPLQPSS
Trigger: ACTAGAGGGCTGCAATGGACTGACCTCCCCCTCACCAGGGTGGCAGGAGAGGCAGAGCCTCTGTGGCCTAGCTAGTGACGGAGAGACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 90 bp GGGCTTCATCGGGTCTCTCCGTCACTAGCTAGGCCACAGAGGCTCTaGCTCTCCTGCCACCCTGGTGAGGGGGAGGTCAGTCCATTGCAG +
Preference number: 5 (lower is better)
Translates to: GLHRVSPSLARPQRL*LSCHPGEGEVSPLQ
Trigger: CTGCAATGGACTGACCTCCCCCTCACCAGGGTGGCAGGAGAGGCAGAGCCTCTGTGGCCTAGCTAGTGACGGAGAGACCCGATGAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CCA 90 bp AGAGGAACGCTGAGAAGGGAACCCCTGAGCACTGGCTGTGTGCCGTaGGAATCTTGCAAAGCTGGCTGCCTCGCCTCTCCCCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: RGTLRREPLSTGCVP*ESCKAGCLASPQLP
Trigger: GGGGAGCTGGGGAGAGGCGAGGCAGCCAGCTTTGCAAGATTCCCACGGCACACAGCCAGTGCTCAGGGGTTCCCTTCTCAGCGTTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCCAGAGCCCCGCAGGTaGCCCGAGTTCCCCACCACG +
Preference number: 5 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCPEPRR*PEFPTT
Trigger: CGTGGTGGGGAACTCGGGCAACCTGCGGGGCTCTGG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACTTGGCGGGCAGGTTCTaGGCACTCTCAGGGTACATG +
Preference number: 5 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLAGRF*ALSGYM
Trigger: CATGTACCCTGAGAGTGCCAAGAACCTGCCCGCCAA...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CCTCCGCCCGAGGCTGACGGAAGTGCTTCGCCGAGGCCCGCGCCATGCTCTCCTCCTGGAGACATCATGTaGACAGAGGCCAAAGTGGTT +
Preference number: 5 (lower is better)
Translates to: PPPEADGSASPRPAPCSPPGDIM*TEAKVV
Trigger: AACCACTTTGGCCTCTGTCAACATGATGTCTCCAGG...AGGAGAGCATGGCGCGGGCCTCGGCGAAGCACTTCCGTCAGCCTCGGGCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCCCTGTTCCCTGTCCTaGTTGAAGTCTCCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGPCSLS*LKSPAH
Trigger: GTGGGCTGGAGACTTCAACAAGGACAGGGAACAGGG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS TCA 90 bp TGCCCCGGTAGACTTCGATCTTGCTGGCCTTGGCCAGCATGTCGATaGTGTGGGCCTCGAAGTCCGCGTCGTGCACGCCAGTCTTCCGGA +
Preference number: 5 (lower is better)
Translates to: CPGRLRSCWPWPACR*CGPRSPRRARQSSG
Trigger: TCCGGAAGACTGGCGTGCACGACGCGGACTTCGAGGCCCACATCATCGACATGCTGGCCAAGGCCAGCAAGATCGAAGTCTACCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS CCA 90 bp GCCACACCAGGTGAGAGGAACGCTGAGAAGGGAACCCCTGAGCACTaGCTGTGTGCCGTGGGAATCTTGCAAAGCTGGCTGCCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: ATPGERNAEKGTPEH*LCAVGILQSWLPRL
Trigger: GAGGCGAGGCAGCCAGCTTTGCAAGATTCCCACGGCACACAGCCAGTGCTCAGGGGTTCCCTTCTCAGCGTTCCTCTCACCTGGTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp GTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTTGCTGGGCTTaGTCCTGCCCCCGGACAGCCCTGAGGGCAGTTGTCTACATCCAT +
Preference number: 5 (lower is better)
Translates to: VGGEPGCVRRCGCWA*SCPRTALRAVVYIH
Trigger: ATGGATGTAGACAACTGCCCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp ATGAACCATGAACAGTCCTGTCAGCTCCGCCGTTGGGGGAGAACCTaGCTGTGTCAGGAGGTGTGGTTGCTGGGCTTGGTCCTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: MNHEQSCQLRRWGRT*LCQEVWLLGLVLPP
Trigger: CGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACGGCGGAGCTGACAGGACTGTTCATGGTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp GCCTGTCAGTGCCTGCAGAGGCCTCTCCCAATCAGAAGGGAGGGCTaGCCGGTCTCTGACCGCCCCTCTTCTCTCGACTGTGGATTATCG +
Preference number: 5 (lower is better)
Translates to: ACQCLQRPLPIRREG*PVSDRPSSLDCGLS
Trigger: CGATAATCCACAGTCGAGAGAAGAGGGGCGGTCAGAGACCGGCCAGCCCTCCCTTCTGATTGGGAGAGGCCTCTGCAGGCACTGACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGCCCGAGAGCCTCTCCTaGCTGAGGCGCTGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQPESLS*LRRCRP
Trigger: CGGCCTGCAGCGCCTCAGCAAGGAGAGGCTCTCGGG...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGATCCTCATGATGAAGTaGTGCCCGTCCACGTCCTGC +
Preference number: 5 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGILMMK*CPSTSC
Trigger: GCAGGACGTGGACGGGCACAACTTCATCATGAGGAT...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCCAAAGAATCTGCGGTTaGGCCACCCACGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSQRICG*ATHGSF
Trigger: GAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTG...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCTCAGATTTCAGTGTCTaGGAGCGCAGAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSSDFSV*ERRVQE
Trigger: TTCCTGGACTCTGCGCTCCAAGACACTGAAATCTGA...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 90 bp AAAGCTCCTACTGTGGCTGTGGGGTCCTCTGGCGCTGGGAACAGCTaGTGTTCAGCGGGGCACTGTGTCCAATACCATCTGGGTCAGGCG +
Preference number: 5 (lower is better)
Translates to: KAPTVAVGSSGAGNS*CSAGHCVQYHLGQA
Trigger: CGCCTGACCCAGATGGTATTGGACACAGTGCCCCGCTGAACAGCAGCTGTTCCCAGCGCCAGAGGACCCCACAGCCACAGTAGGAGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS GCA 90 bp GGAGAACCTGGCTGTGTCAGGAGGTGTGGTTGCTGGGCTTGGTCCTaGCCCCGGACAGCCCTGAGGGCAGTTGTCTACATCCATCTGTAC +
Preference number: 5 (lower is better)
Translates to: GEPGCVRRCGCWAWS*PRTALRAVVYIHLY
Trigger: GTACAGATGGATGTAGACAACTGCCCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp CTGGGAACAGCTGCTGTTCAGCGGGGCACTGTGTCCAATACCATCTaGGTCAGGCGAGCTTGTGCTGAGCTCCCTACCAGGGTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: LGTAAVQRGTVSNTI*VRRACAELPTRVQV
Trigger: GACCTGGACCCTGGTAGGGAGCTCAGCACAAGCTCGCCTGACCCAGATGGTATTGGACACAGTGCCCCGCTGAACAGCAGCTGTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS-3UTR CAA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCGGGGCTTCAGGGGACTaGGGTTCCATGCAAGTGTTG +
Preference number: 5 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCGASGD*GSMQVL
Trigger: CAACACTTGCATGGAACCCAAGTCCCCTGAAGCCCC...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCAGCGACCGCTTTTCTTaGGTGGGTCTGCACGCACCT +
Preference number: 5 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCSDRFS*VGLHAP
Trigger: AGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCT...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CCA 90 bp TCCATGTTCTCTCGGGTCCAGACGGGGGAAATGTTACCGTCAAAGTaGCTGTCAAACCAGTCGGAGGCACCGGCATCGCCCATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: SMFSRVQTGEMLPSK*LSNQSEAPASPMQR
Trigger: CCGCTGCATGGGCGATGCCGGTGCCTCCGACTGGTTTGACAGCCACTTTGACGGTAACATTTCCCCCGTCTGGACCCGAGAGAACATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGGGGAGGTCAGTCCATaGCAGCCCTCTAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: IPATREVEVGELGRRRLQGEVSP*QPSSPL
Trigger: CAAGGGACTAGAGGGCTGCAATGGACTGACCTCCCC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAATGAGGGAGTGGGGATaGAGCGGCCGCTGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEMREWG*SGRWPA
Trigger: GGCGGGCCAGCGGCCGCTCAATCCCCACTCCCTCAT...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAGTGGAGGCAGGCGGCTaGCGGCGCGCAAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEVEAGG*RRASLL
Trigger: GAGGAGACTTGCGCGCCGCAAGCCGCCTGCCTCCAC...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTATCCGGGCAGGCGGGGCCTGGAGACATCATGTaGACAGAGGCCAAAGTGGTT +
Preference number: 5 (lower is better)
Translates to: AATAFLWWVCTHLSGQAGPGDIM*TEAKVV
Trigger: AACCACTTTGGCCTCTGTCAACATGATGTCTCCAGG...CCCCGCCTGCCCGGATAGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGCCGACATCGGGCCATaGCACTCCAGCCTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCADIGP*HSSLGN
Trigger: GTTACCCAGGCTGGAGTGCAATGGCCCGATGTCGGC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGGGGTGTGGTCAAACATaGGGAGGCCAAAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: IPATREVEVGELGRRRLQGCGQT*GGQRGW
Trigger: CCACCCCCTTTGGCCTCCCAATGTTTGACCACACCC...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGGTACATGCAGCGGGCAGCCGGGCCCATAGCCAGCCTCCTTCCGCCGTGCAGCGATTTTGTGGGTTGGTaGTTACCCAGGCATAGACTT +
Preference number: 5 (lower is better)
Translates to: RYMQRAAGPIASLLPPCSDFVGW*LPRHRL
Trigger: AAGTCTATGCCTGGGTAACAACCAACCCACAAAATC...GCTGCACGGCGGAAGGAGGCTGGCTATGGGCCCGGCTGCCCGCTGCATGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 90 bp CCTGCAGAGGCCTCTCCCAATCAGAAGGGAGGGCTGGCCGGTCTCTaGCCGCCCCTCTTCTCTCGACTGTGGATTATCGATGAGGTATTG +
Preference number: 5 (lower is better)
Translates to: PAEASPNQKGGLAGL*PPLFSRLWIIDEVL
Trigger: CAATACCTCATCGATAATCCACAGTCGAGAGAAGAGGGGCGGTCAGAGACCGGCCAGCCCTCCCTTCTGATTGGGAGAGGCCTCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp TGGGTCCACTCAATGAACCATGAACAGTCCTGTCAGCTCCGCCGTTaGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: WVHSMNHEQSCQLRR*GRTWLCQEVWLLGL
Trigger: CAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACGGCGGAGCTGACAGGACTGTTCATGGTTCATTGAGTGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTCTAGTCCCTTGGGATaGCTGGCTGCCAGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: IPATREVEVGELGRRRLQSSPLG*LAASSR
Trigger: CCTAGAGCTGGCAGCCAGCAATCCCAAGGGACTAGA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp ATTCCAGCTACTCGGGAGGTTGAGGTGGGTGAACTTGGGAGGCGGAGGTTGCAGTTGGCGGGCAGGTTCTaGGCACTCTCAGGGTACATG +
Preference number: 5 (lower is better)
Translates to: IPATREVEVGELGRRRLQLAGRF*ALSGYM
Trigger: CATGTACCCTGAGAGTGCCAAGAACCTGCCCGCCAA...CTGCAACCTCCGCCTCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTATGATTGGTCGCGGGTaGCTGGTCCTGGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVMIGRG*LVLGPG
Trigger: CCCGGGACCCAGGACCAGCAACCCGCGACCAATCAT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GGGGAGAATTCCACCAGCAGCCCCGTCAGGGACCTAAGCTGGGTTCAGCCATGCCGCCGGAAGTTTTCCTaGAGTCACATGATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GENSTSSPVRDLSWVQPCRRKFS*SHMIGW
Trigger: CCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCG...GCATGGCTGAACCCAGCTTAGGTCCCTGACGGGGCTGCTGGTGGAATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACCTGCCAGCTCAGAATTaGCAAAGAATCTGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHLPAQN*QRICGL
Trigger: CAAACCGCAGATTCTTTGCAAATTCTGAGCTGGCAG...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCTCAGATTTCAGTGTCTaGGAGCGCAGAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSSDFSV*ERRVQE
Trigger: TTCCTGGACTCTGCGCTCCAAGACACTGAAATCTGA...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCAGCTACTCGGGAGGTaGAGGTGGGTGAACTTGGGA +
Preference number: 5 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQQLLGR*RWVNLG
Trigger: TCCCAAGTTCACCCACCTCAACCTCCCGAGTAGCTG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GGTGGGACTGGGGGTCCCGCAGCGACCGCTTTTCTTTGGTGGGTCTGCACGCACACCTCCTCTTGGATTTaGTGGGTTGGTTGTTACCCA +
Preference number: 5 (lower is better)
Translates to: GGTGGPAATAFLWWVCTHTSSWI*WVGCYP
Trigger: TGGGTAACAACCAACCCACAAAATCCAAGAGGAGGT...GTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCTGCGGGACCCCCAGTCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGGTCTCCAGCCCACTTTaGGGGTCTCCTGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLVSSPL*GSPGCF
Trigger: GAAGCAGCCAGGAGACCCCAAAAGTGGGCTGGAGAC...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp CTTGAACTGGGGCTGCAGCATCATCCACCACCTCTGGACGTCCGGTaGAAGATCCATGTTCTCTCGGGTCCAGACGGGGGAAATGTTACC +
Preference number: 5 (lower is better)
Translates to: LELGLQHHPPPLDVR*KIHVLSGPDGGNVT
Trigger: GGTAACATTTCCCCCGTCTGGACCCGAGAGAACATGGATCTTCCACCGGACGTCCAGAGGTGGTGGATGATGCTGCAGCCCCAGTTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTCAAAGAATCTGCGGTTaGGCCACCCACGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCQRICG*ATHGSF
Trigger: GAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTG...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCCAGCTCAGAATTTGCAAAGAATCTGCGGTTTGGCCACCCACGGCAGCTTCAGGGGTGTGGTCAAACATaGGGAGGCCAAAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: ASSEFAKNLRFGHPRQLQGCGQT*GGQRGW
Trigger: CCACCCCCTTTGGCCTCCCAATGTTTGACCACACCC...CTGAAGCTGCCGTGGGTGGCCAAACCGCAGATTCTTTGCAAATTCTGAGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGCTGATGCCTCTGACCTaGCCAGACAGTCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQLMPLT*PDSHRR
Trigger: CCTTCTGTGACTGTCTGGCAAGGTCAGAGGCATCAG...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 90 bp AGGGCAAAGAAAAGCACCAGCATCCCCGTGGAAGGGTACCGCCCGTaGTGCTCTGTCCACCTGTCGTGGATATACTTGAAGAAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RAKKSTSIPVEGYRP*CSVHLSWIYLKKAG
Trigger: CCCAGCCTTCTTCAAGTATATCCACGACAGGTGGACAGAGCATCACGGGCGGTACCCTTCCACGGGGATGCTGGTGCTTTTCTTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS GCA 90 bp GGAAAACTCCGCTGCAGAGATCGAGATCCTTTCCGCAGTAGGTCTTaGCCTTCTGCTTCCCATCTGAGGTGCTGGTCCCTTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: GKLRCRDRDPFRSRS*PSASHLRCWSLLLV
Trigger: CACCAGGAGAAGGGACCAGCACCTCAGATGGGAAGCAGAAGGGCAAGACCTACTGCGGAAAGGATCTCGATCTCTGCAGCGGAGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS CCA 90 bp CCTCATCACACACATGCAGGGCAAAGAAAAGCACCAGCATCCCCGTaGAAGGGTACCGCCCGTGATGCTCTGTCCACCTGTCGTGGATAT +
Preference number: 5 (lower is better)
Translates to: PHHTHAGQRKAPASP*KGTARDALSTCRGY
Trigger: ATATCCACGACAGGTGGACAGAGCATCACGGGCGGTACCCTTCCACGGGGATGCTGGTGCTTTTCTTTGCCCTGCATGTGTGTGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS-3UTR CAA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGTTGGTGTTGTGTGACTaGAACTGGGGCTGCAGCATC +
Preference number: 5 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQLVLCD*NWGCSI
Trigger: GATGCTGCAGCCCCAGTTCAAGTCACACAACACCAA...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTGTGGCATGGTGGAAATaGGGCTGTGGAGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVVAWWK*GCGGRA
Trigger: AGCCCTGCCTCCACAGCCCAATTTCCACCATGCCAC...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TTGAGTCACATGATTGGCTGGGAGAAACAGAAGCTCCGCCCGACCGCAGCGCAGACAGAAGGTACTTCCTaGTCTGCTGCCTGTGGATGG +
Preference number: 5 (lower is better)
Translates to: LSHMIGWEKQKLRPTAAQTEGTS*SAACGW
Trigger: CCATCCACAGGCAGCAGACAAGGAAGTACCTTCTGT...CTGCGCTGCGGTCGGGCGGAGCTTCTGTTTCTCCCAGCCAATCATGTGACTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGCCGGTCCCTGTTCCCTCAGCCAGCTGCAGGAACCTACCAACGGCCAGGAAGCGATTTTGTGGGTTGGTaGTTACCCAGGCATAGACTT +
Preference number: 5 (lower is better)
Translates to: CRSLFPQPAAGTYQRPGSDFVGW*LPRHRL
Trigger: AAGTCTATGCCTGGGTAACAACCAACCCACAAAATC...GCTTCCTGGCCGTTGGTAGGTTCCTGCAGCTGGCTGAGGGAACAGGGACCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTTGTGCCGTGGGAATCTaGCAAAGCTGGCTGCCTCGC +
Preference number: 5 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVCAVGI*QSWLPR
Trigger: GCGAGGCAGCCAGCTTTGCAAGATTCCCACGGCACA...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGTGTGGTTGCTGGGCTaGGTCCTGCCCCCGGACAGC +
Preference number: 5 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAVWLLG*VLPPDS
Trigger: GCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACAC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 90 bp AAGTCTCCAGCCCACTTTTGGGGTCTCCTGGCTGCTTCCAGCAGCTaGATACAAGGCCTCTCAGGCTCTGTGTTCAAGAAACGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: KSPAHFWGLLAASSS*IQGLSGSVFKKRSC
Trigger: GCAGCTACGTTTCTTGAACACAGAGCCTGAGAGGCCTTGTATGCAGCTGCTGGAAGCAGCCAGGAGACCCCAAAAGTGGGCTGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 90 bp CCTGTCCTTGTTGAAGTCTCCAGCCCACTTTTGGGGTCTCCTGGCTaGTTCCAGCAGCTGCATACAAGGCCTCTCAGGCTCTGTGTTCAA +
Preference number: 5 (lower is better)
Translates to: PVLVEVSSPLLGSPG*FQQLHTRPLRLCVQ
Trigger: TTGAACACAGAGCCTGAGAGGCCTTGTATGCAGCTGCTGGAAGCAGCCAGGAGACCCCAAAAGTGGGCTGGAGACTTCAACAAGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 90 bp GGAGACCCCAGCAGCACTGGCTCAAAGGTGCTTCTTCCAATGTTCTaGTGTGCCCATTTAGCAGATCCCACTCTAGGCATGGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GDPSSTGSKVLLPMF*CAHLADPTLGMALA
Trigger: AGCCAAGGCCATGCCTAGAGTGGGATCTGCTAAATGGGCACAGCAGAACATTGGAAGAAGCACCTTTGAGCCAGTGCTGCTGGGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS-3UTR CAA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAAGCACGAAGCTGACGTaGGCGGGCAGGTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RLDTAPEVFLESHDWLGESTKLT*AGRFLA
Trigger: TGCCAAGAACCTGCCCGCCAACGTCAGCTTCGTGCT...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 90 bp CTGTGGATTATCGATGAGGTATTGCTGGGTCCACTCAATGAACCATaGACAGTCCTGTCAGCTCCGCCGTTGGGGGAGAACCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LWIIDEVLLGPLNEP*TVLSAPPLGENLAV
Trigger: CACAGCCAGGTTCTCCCCCAACGGCGGAGCTGACAGGACTGTTCATGGTTCATTGAGTGGACCCAGCAATACCTCATCGATAATCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 90 bp AGCTGCATACAAGGCCTCTCAGGCTCTGTGTTCAAGAAACGTAGCTaGCCCTCCATTTGTGGCCACAAAGCCAGCAGGGAATGGAACGAG +
Preference number: 5 (lower is better)
Translates to: SCIQGLSGSVFKKRS*PSICGHKASREWNE
Trigger: CTCGTTCCATTCCCTGCTGGCTTTGTGGCCACAAATGGAGGGGCAGCTACGTTTCTTGAACACAGAGCCTGAGAGGCCTTGTATGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp GACCGCCCCTCTTCTCTCGACTGTGGATTATCGATGAGGTATTGCTaGGTCCACTCAATGAACCATGAACAGTCCTGTCAGCTCCGCCGT +
Preference number: 5 (lower is better)
Translates to: DRPSSLDCGLSMRYC*VHSMNHEQSCQLRR
Trigger: ACGGCGGAGCTGACAGGACTGTTCATGGTTCATTGAGTGGACCCAGCAATACCTCATCGATAATCCACAGTCGAGAGAAGAGGGGCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 90 bp CCCTCTAGCTGCACAGATAGCATCACTGTGTGGGACTCCAGGGCCTaGAGGACTAGATTAGCCCAGAGTCTTCACTTCTTAGCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PSSCTDSITVWDSRA*RTRLAQSLHFLARR
Trigger: CCTTCTGGCTAAGAAGTGAAGACTCTGGGCTAATCTAGTCCTCCAGGCCCTGGAGTCCCACACAGTGATGCTATCTGTGCAGCTAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCAGCCCCAGCTGCAGTaGCGTAGGGGTCGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAQPQLQ*RRGRKA
Trigger: AGCTTTGCGACCCCTACGCAACTGCAGCTGGGGCTG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTCGACAGGCACAGCTCTaGCCCGAGAGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: AQTVARGKVLIPHSEDQARQAQL*PESLSL
Trigger: CAAGGAGAGGCTCTCGGGCAAGAGCTGTGCCTGTCG...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTCGCCCCCGAAGGCCATaGATTGGAGGAGACTGGACA +
Preference number: 5 (lower is better)
Translates to: SPMNSSPGGNSRGDNELIRPRRP*IGGDWT
Trigger: TGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGCG...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAGTGGCATGGTGGAAATaGGGCTGTGGAGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VQMPYVSSASQASLWREPVAWWK*GCGGRA
Trigger: AGCCCTGCCTCCACAGCCCAATTTCCACCATGCCAC...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AAAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGCCACTTGTAGGCAGTTaGGGTCTCAGCCATAAGGAA +
Preference number: 5 (lower is better)
Translates to: KNAGCLWHGGNWAVEAGLPLVGS*GLSHKE
Trigger: TTCCTTATGGCTGAGACCCAAACTGCCTACAAGTGG...CAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS TCA 90 bp AAAGCTAGCAGGAGAGGAGATGCCCACTTAATCAGAGGGTGGACATaGCCAAGGGCTCTGCCCTCTAGCTGCACAGATAGCATCACTGTG +
Preference number: 5 (lower is better)
Translates to: KASRRGDAHLIRGWT*PRALPSSCTDSITV
Trigger: CACAGTGATGCTATCTGTGCAGCTAGAGGGCAGAGCCCTTGGTCATGTCCACCCTCTGATTAAGTGGGCATCTCCTCTCCTGCTAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS TCA 90 bp CTGCTGTGCCCATTTAGCAGATCCCACTCTAGGCATGGCCTTGGCTaGACAGTCTGTAGATGGGAAGCCAGGTCCTTGTCTCCTCTCATT +
Preference number: 5 (lower is better)
Translates to: LLCPFSRSHSRHGLG*TVCRWEARSLSPLI
Trigger: AATGAGAGGAGACAAGGACCTGGCTTCCCATCTACAGACTGTTCAGCCAAGGCCATGCCTAGAGTGGGATCTGCTAAATGGGCACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS GCA 90 bp TCTGACCGCCCCTCTTCTCTCGACTGTGGATTATCGATGAGGTATTaGTGGGTCCACTCAATGAACCATGAACAGTCCTGTCAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: SDRPSSLDCGLSMRY*WVHSMNHEQSCQLR
Trigger: GCGGAGCTGACAGGACTGTTCATGGTTCATTGAGTGGACCCAGCAATACCTCATCGATAATCCACAGTCGAGAGAAGAGGGGCGGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCAGGGGCTTCAGGGGACTaGGGTTCCATGCAAGTGTTG +
Preference number: 5 (lower is better)
Translates to: VQMPYVSSASQASLWREPGASGD*GSMQVL
Trigger: CAACACTTGCATGGAACCCAAGTCCCCTGAAGCCCC...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTTTCTCCAGCACCTCATaGGTGTTGTGTGACTTGAAC +
Preference number: 5 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCFSSTS*VLCDLN
Trigger: GTTCAAGTCACACAACACCAATGAGGTGCTGGAGAA...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AGACTGGACACAGCGCCGGAAGTTTTCCTTGAGTCACATGATTGGCTGGGAGAAATCCTCATGATGAAGTaGTGCCCGTCCACGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RLDTAPEVFLESHDWLGEILMMK*CPSTSC
Trigger: GCAGGACGTGGACGGGCACAACTTCATCATGAGGAT...TTCTCCCAGCCAATCATGTGACTCAAGGAAAACTTCCGGCGCTGTGTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTAGCACGAAGCTGACGTaGGCGGGCAGGTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: AQTVARGKVLIPHSEDQASTKLT*AGRFLA
Trigger: TGCCAAGAACCTGCCCGCCAACGTCAGCTTCGTGCT...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TCTCCAATGAACTCCTCTCCTGGAGGAAACTCAAGAGGCGACAACGAGCTGATTAGCGACCGCTTTTCTTaGGTGGGTCTGCACGCACCT +
Preference number: 5 (lower is better)
Translates to: SPMNSSPGGNSRGDNELISDRFS*VGLHAP
Trigger: AGGTGCGTGCAGACCCACCAAAGAAAAGCGGTCGCT...AATCAGCTCGTTGTCGCCTCTTGAGTTTCCTCCAGGAGAGGAGTTCATTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTGGCTCTATTAGTGGTTaGAGAGCTTCACAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCGSISG*RASQKP
Trigger: AGGCTTCTGTGAAGCTCTCAAACCACTAATAGAGCC...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 90 bp GAGAGGACAAAAACAGGAAGCTCTGTGAGTGTGGGAAAACTCCGCTaGAGAGATCGAGATCCTTTCCGCAGTAGGTCTTGCCCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ERTKTGSSVSVGKLR*RDRDPFRSRSCPSA
Trigger: AGCAGAAGGGCAAGACCTACTGCGGAAAGGATCTCGATCTCTGCAGCGGAGTTTTCCCACACTCACAGAGCTTCCTGTTTTTGTCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS-3UTR CAA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCATCGATCTTGCTGGCCTaGGCCAGCATGTCGATGATG +
Preference number: 5 (lower is better)
Translates to: VQMPYVSSASQASLWREPSILLA*ASMSMM
Trigger: CATCATCGACATGCTGGCCAAGGCCAGCAAGATCGA...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTATGAGGGAGTGGGGATaGAGCGGCCGCTGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LFLLFLLSELERTTLELGMREWG*SGRWPA
Trigger: GGCGGGCCAGCGGCCGCTCAATCCCCACTCCCTCAT...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTTGTTCCCTGTCCTTGTaGAAGTCTCCAGCCCACTTT +
Preference number: 5 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVCSLSL*KSPAHF
Trigger: AAAGTGGGCTGGAGACTTCAACAAGGACAGGGAACA...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp AAAATGCGGGTTGCCTGTGGCATGGTGGAAATTGGGCTGTGGAGGCAGGGCTGTTTTCTACTTTCGGAATaGGAAAGAACGACACTCGAG +
Preference number: 5 (lower is better)
Translates to: KMRVACGMVEIGLWRQGCFLLSE*ERTTLE
Trigger: CTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAA...ACAGCCCTGCCTCCACAGCCCAATTTCCACCATGCCACAGGCAACCCGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GCACAAACAGTTGCTAGAGGAAAGGTGTTAATTCCACACTCTGAGGACCAGGCTGAGGGGGACCTCCTCTaGGATTTTGTGGGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: AQTVARGKVLIPHSEDQAEGDLL*DFVGWL
Trigger: CAACCAACCCACAAAATCCAAGAGGAGGTCCCCCTC...AGCCTGGTCCTCAGAGTGTGGAATTAACACCTTTCCTCTAGCAACTGTTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp GTGCAGATGCCATATGTTTCTTCTGCTTCACAGGCTTCCCTCTGGAGAGAACCACTGCCAGCTCAGAATTaGCAAAGAATCTGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: VQMPYVSSASQASLWREPLPAQN*QRICGL
Trigger: CAAACCGCAGATTCTTTGCAAATTCTGAGCTGGCAG...TGGTTCTCTCCAGAGGGAAGCCTGTGAAGCAGAAGAAACATATGGCATCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp TGTCAAACTCTTCCCTTTCATGGTCTCCAGTGCGGTGCCCGTGGTAACAGCGTTATTATCGATGAGGTATaGCTGGGTCCACTCAATGAA +
Preference number: 5 (lower is better)
Translates to: CQTLPFHGLQCGARGNSVIIDEV*LGPLNE
Trigger: TTCATTGAGTGGACCCAGCAATACCTCATCGATAAT...AACGCTGTTACCACGGGCACCGCACTGGAGACCATGAAAGGGAAGAGTTTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS-3UTR CAA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTCGCCCCCGAAGGCCATaGATTGGAGGAGACTGGACA +
Preference number: 5 (lower is better)
Translates to: LFLLFLLSELERTTLELGRPRRP*IGGDWT
Trigger: TGTCCAGTCTCCTCCAATCAATGGCCTTCGGGGGCG...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTAGCACCTCATTGGTGTaGTGTGACTTGAACTGGGGC +
Preference number: 5 (lower is better)
Translates to: LFLLFLLSELERTTLELGSTSLV*CDLNWG
Trigger: GCCCCAGTTCAAGTCACACAACACCAATGAGGTGCT...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTACAGAAGGTACTTCCTaGTCTGCTGCCTGTGGATGG +
Preference number: 5 (lower is better)
Translates to: LFLLFLLSELERTTLELGTEGTS*SAACGW
Trigger: CCATCCACAGGCAGCAGACAAGGAAGTACCTTCTGT...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTTTCTCCAGCACCTCATaGGTGTTGTGTGACTTGAAC +
Preference number: 5 (lower is better)
Translates to: LFLLFLLSELERTTLELGFSSTS*VLCDLN
Trigger: GTTCAAGTCACACAACACCAATGAGGTGCTGGAGAA...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS-3UTR CAA 90 bp CTATTTTTACTCTTTCTACTTTCGGAATTGGAAAGAACGACACTCGAGCTAGGTGGCTCTATTAGTGGTTaGAGAGCTTCACAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LFLLFLLSELERTTLELGGSISG*RASQKP
Trigger: AGGCTTCTGTGAAGCTCTCAAACCACTAATAGAGCC...ACCTAGCTCGAGTGTCGTTCTTTCCAATTCCGAAAGTAGAAAGAGTAAAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CAA 72 bp GCTCTCTCGTCCGCCCGCCGTGGGCTAGTCCCGCCCTaGCCTGGCCCAACCCTCCCCGAGCGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: ALSSARRGLVPP*PGPTLPERRRR
Trigger: GCGGCGGCGGCGCTCGGGGAGGGTTGGGCCAGGCAAGGGCGGGACTAGCCCACGGCGGGCGGACGAGAGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566097.1
CDS CCA 72 bp CCTGGGTCCCGGGCCGGAGCCCCGGTGCCCGATAGATaGGCCGGAAGGGTCGCGGCGAGGCCCGGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: PGSRAGAPVPDR*AGRVAARPGSV
Trigger: AACTGAGCCGGGCCTCGCCGCGACCCTTCCGGCCCATCTATCGGGCACCGGGGCTCCGGCCCGGGACCCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS GCA 72 bp CCTGGCAGGTTCCCCTTCACATGTCGGGCGCCAGGCTaGCGCAGCACGACCCTCAGTCAGCGCCCGGCGCCG +
Preference number: 6 (lower is better)
Translates to: PGRFPFTCRAPG*RSTTLSQRPAP
Trigger: CGGCGCCGGGCGCTGACTGAGGGTCGTGCTGCGGCAGCCTGGCGCCCGACATGTGAAGGGGAACCTGCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000566097.1
CDS CCA 72 bp GACCCGTTAGCTCGCAGCTCTCTCGTCCGCCCGCCGTaGGCTAGTCCCGCCCTTGCCTGGCCCAACCCTCCC +
Preference number: 6 (lower is better)
Translates to: DPLARSSLVRPP*ASPALAWPNPP
Trigger: GGGAGGGTTGGGCCAGGCAAGGGCGGGACTAGCCCACGGCGGGCGGACGAGAGAGCTGCGAGCTAACGGGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566097.1
CDS TCA 72 bp CTCGAGTTCTTTCAGGGTCCCGCTCCCAGCTTCCTGTaGCCTCAGTCAGCGCCCGGCGCCGCGCGGGCCATG +
Preference number: 6 (lower is better)
Translates to: LEFFQGPAPSFL*PQSAPGAARAM
Trigger: CATGGCCCGCGCGGCGCCGGGCGCTGACTGAGGTCACAGGAAGCTGGGAGCGGGACCCTGAAAGAACTCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS CCA 72 bp CCACGGAGAGGAACCACACCCGCAGGGAGCACTTCATaGTGCCGGCAGGCGGGTGACGGTCACCGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: PRRGTTPAGSTS*CRQAGDGHRGH
Trigger: GTGGCCACGGTGACCGTCACCCGCCTGCCGGCACCATGAAGTGCTCCCTGCGGGTGTGGTTCCTCTCCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 72 bp ACCCGCAGGGAGCACTTCATGGTGCCGGCAGGCGGGTaGCGGTCACCGTGGCCACTCTTTTCCCAGCCCGCT +
Preference number: 6 (lower is better)
Translates to: TRREHFMVPAGG*RSPWPLFSQPA
Trigger: AGCGGGCTGGGAAAAGAGTGGCCACGGTGACCGTCACCCGCCTGCCGGCACCATGAAGTGCTCCCTGCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 72 bp CGGAGAGGAACCACACCCGCAGGGAGCACTTCATGGTaGCGGCAGGCGGGTGACGGTCACCGTGGCCACTCT +
Preference number: 6 (lower is better)
Translates to: RRGTTPAGSTSW*RQAGDGHRGHS
Trigger: AGAGTGGCCACGGTGACCGTCACCCGCCTGCCGGCACCATGAAGTGCTCCCTGCGGGTGTGGTTCCTCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 72 bp GGCTGTCAAACCAGTCGGAGGCACCGGCATCGCCCATaGAGCGGCGACAGGCACAGCTCTTGCCCGAGAGCC +
Preference number: 6 (lower is better)
Translates to: GCQTSRRHRHRP*SGDRHSSCPRA
Trigger: GGCTCTCGGGCAAGAGCTGTGCCTGTCGCCGCTGCATGGGCGATGCCGGTGCCTCCGACTGGTTTGACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 72 bp ATGGGCCGGAAGGGTCGCGGCGAGGCCCGGCTCAGTTaGCCCGGTAGACTTCGATCTTGCTGGCCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: MGRKGRGEARLS*PGRLRSCWPWP
Trigger: TGGCCAAGGCCAGCAAGATCGAAGTCTACCGGGGCAACTGAGCCGGGCCTCGCCGCGACCCTTCCGGCCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS CCA 72 bp CGCCGTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTaGTTGCTGGGCTTGGTCCTGCCCCCGGACAGCCCT +
Preference number: 6 (lower is better)
Translates to: RRWGRTWLCQEV*LLGLVLPPDSP
Trigger: AGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CAA 90 bp CAGCTCCGCCGTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTaGCTGGGCTTGGTCCTGCCCCCGGACAGCCCTGAGGGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: QLRRWGRTWLCQEVW*LGLVLPPDSPEGSC
Trigger: ACAACTGCCCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACGGCGGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS TCA 72 bp GTGACGGTCACCGTGGCCACTCTTTTCCCAGCCCGCTaGGGGGCCAGCCACGGCGTAGCCTGCCTATTCTGG +
Preference number: 6 (lower is better)
Translates to: VTVTVATLFPAR*GASHGVACLFW
Trigger: CCAGAATAGGCAGGCTACGCCGTGGCTGGCCCCTCAGCGGGCTGGGAAAAGAGTGGCCACGGTGACCGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 72 bp GTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTTaGTGGGCTTGGTCCTGCCCCCGGACAGCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: VGGEPGCVRRCG*WAWSCPRTALR
Trigger: CCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 72 bp CCTGGCAGGTTCCCCTTCACATGTCGGGCGCCAGGCTaGCGCAGCACGACCCTGAAACTGGCACCACTGTCC +
Preference number: 6 (lower is better)
Translates to: PGRFPFTCRAPG*RSTTLKLAPLS
Trigger: GGACAGTGGTGCCAGTTTCAGGGTCGTGCTGCGGCAGCCTGGCGCCCGACATGTGAAGGGGAACCTGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561708.1
CDS CAA 72 bp CGTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTaGCTGGGCTTGGTCCTGCCCCCGGACAGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: RWGRTWLCQEVW*LGLVLPPDSPE
Trigger: CTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 72 bp CGGGTCTCTCCGTCACTAGCTAGGCCACAGAGGCTCTaGCTCTCCTGCCACCCTGGTGAGGGGGAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: RVSPSLARPQRL*LSCHPGEGEVS
Trigger: ACTGACCTCCCCCTCACCAGGGTGGCAGGAGAGGCAGAGCCTCTGTGGCCTAGCTAGTGACGGAGAGACCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS GCA 72 bp AGCATGTCGATGATGTGGGCCTCGAAGTCCGCGTCGTaGACGCCAGTCTTCCGGAACTCGCCCGCGTACCGG +
Preference number: 6 (lower is better)
Translates to: SMSMMWASKSAS*TPVFRNSPAYR
Trigger: CCGGTACGCGGGCGAGTTCCGGAAGACTGGCGTGCACGACGCGGACTTCGAGGCCCACATCATCGACATGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS GCA 72 bp GAACCCCTGAGCACTGGCTGTGTGCCGTGGGAATCTTaGAAAGCTGGCTGCCTCGCCTCTCCCCAGCTCCCC +
Preference number: 6 (lower is better)
Translates to: EPLSTGCVPWES*KAGCLASPQLP
Trigger: GGGGAGCTGGGGAGAGGCGAGGCAGCCAGCTTTGCAAGATTCCCACGGCACACAGCCAGTGCTCAGGGGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 72 bp CCTGGCAGGTTCCCCTTCACATGTCGGGCGCCAGGCTaGCGCAGCACGACCCTAAGGTCACGACGTTGTGAG +
Preference number: 6 (lower is better)
Translates to: PGRFPFTCRAPG*RSTTLRSRRCE
Trigger: CTCACAACGTCGTGACCTTAGGGTCGTGCTGCGGCAGCCTGGCGCCCGACATGTGAAGGGGAACCTGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS GCA 72 bp CCTGGCAGGTTCCCCTTCACATGTCGGGCGCCAGGCTaGCGCAGCACGACCCTAGAATGGCAGAGAGGAGAA +
Preference number: 6 (lower is better)
Translates to: PGRFPFTCRAPG*RSTTLEWQRGE
Trigger: TTCTCCTCTCTGCCATTCTAGGGTCGTGCTGCGGCAGCCTGGCGCCCGACATGTGAAGGGGAACCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 72 bp TGCCTGCAGAGGCCTCTCCCAATCAGAAGGGAGGGCTaGCCGGTCTCTGACCGCCCCTCTTCTCTCGACTGT +
Preference number: 6 (lower is better)
Translates to: CLQRPLPIRREG*PVSDRPSSLDC
Trigger: ACAGTCGAGAGAAGAGGGGCGGTCAGAGACCGGCCAGCCCTCCCTTCTGATTGGGAGAGGCCTCTGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CAA 72 bp CTCTCCTGCCACCCTGGTGAGGGGGAGGTCAGTCCATaGCAGCCCTCTAGTCCCTTGGGATTGCTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LSCHPGEGEVSP*QPSSPLGLLAA
Trigger: GGCAGCCAGCAATCCCAAGGGACTAGAGGGCTGCAATGGACTGACCTCCCCCTCACCAGGGTGGCAGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CAA 72 bp GACAAGGCGCTGGCGATCCACAGAAGGTCCAGGACCTaGAAGGGCACCAGCACGAAGCTGACGTTGGCGGGC +
Preference number: 6 (lower is better)
Translates to: DKALAIHRRSRT*KGTSTKLTLAG
Trigger: GCCCGCCAACGTCAGCTTCGTGCTGGTGCCCTTCAAGGTCCTGGACCTTCTGTGGATCGCCAGCGCCTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS CAA 90 bp AGGCTCTGCCTCTCCTGCCACCCTGGTGAGGGGGAGGTCAGTCCATaGCAGCCCTCTAGTCCCTTGGGATTGCTGGCTGCCAGCTCTAGG +
Preference number: 6 (lower is better)
Translates to: RLCLSCHPGEGEVSP*QPSSPLGLLAASSR
Trigger: CCTAGAGCTGGCAGCCAGCAATCCCAAGGGACTAGAGGGCTGCAATGGACTGACCTCCCCCTCACCAGGGTGGCAGGAGAGGCAGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CAA 90 bp TGCCCCGTGGACAAGGCGCTGGCGATCCACAGAAGGTCCAGGACCTaGAAGGGCACCAGCACGAAGCTGACGTTGGCGGGCAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: CPVDKALAIHRRSRT*KGTSTKLTLAGRFL
Trigger: CAAGAACCTGCCCGCCAACGTCAGCTTCGTGCTGGTGCCCTTCAAGGTCCTGGACCTTCTGTGGATCGCCAGCGCCTTGTCCACGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS CAA 90 bp CGTTGGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTTGCTGGGCTaGGTCCTGCCCCCGGACAGCCCTGAGGGCAGTTGTCTACATCCA +
Preference number: 6 (lower is better)
Translates to: RWGRTWLCQEVWLLG*VLPPDSPEGSCLHP
Trigger: TGGATGTAGACAACTGCCCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 72 bp TCTCCTGCCACCCTGGTGAGGGGGAGGTCAGTCCATTaGAGCCCTCTAGTCCCTTGGGATTGCTGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: SPATLVRGRSVH*SPLVPWDCWLP
Trigger: TGGCAGCCAGCAATCCCAAGGGACTAGAGGGCTGCAATGGACTGACCTCCCCCTCACCAGGGTGGCAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CCA 72 bp TCAGTCCATTGCAGCCCTCTAGTCCCTTGGGATTGCTaGCTGCCAGCTCTAGGGGTCCCCCTCTTTGGCGGC +
Preference number: 6 (lower is better)
Translates to: SVHCSPLVPWDC*LPALGVPLFGG
Trigger: GCCGCCAAAGAGGGGGACCCCTAGAGCTGGCAGCCAGCAATCCCAAGGGACTAGAGGGCTGCAATGGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CCA 72 bp GGGCTGCAGCATCATCCACCACCTCTGGACGTCCGGTaGAAGATCCATGTTCTCTCGGGTCCAGACGGGGGA +
Preference number: 6 (lower is better)
Translates to: GLQHHPPPLDVR*KIHVLSGPDGG
Trigger: TCCCCCGTCTGGACCCGAGAGAACATGGATCTTCCACCGGACGTCCAGAGGTGGTGGATGATGCTGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CCA 72 bp CTGAGAAGGGAACCCCTGAGCACTGGCTGTGTGCCGTaGGAATCTTGCAAAGCTGGCTGCCTCGCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LRREPLSTGCVP*ESCKAGCLASP
Trigger: GGGAGAGGCGAGGCAGCCAGCTTTGCAAGATTCCCACGGCACACAGCCAGTGCTCAGGGGTTCCCTTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS TCA 72 bp AGACTTCGATCTTGCTGGCCTTGGCCAGCATGTCGATaGTGTGGGCCTCGAAGTCCGCGTCGTGCACGCCAG +
Preference number: 6 (lower is better)
Translates to: RLRSCWPWPACR*CGPRSPRRARQ
Trigger: CTGGCGTGCACGACGCGGACTTCGAGGCCCACATCATCGACATGCTGGCCAAGGCCAGCAAGATCGAAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS GCA 72 bp ACTGTGGCTGTGGGGTCCTCTGGCGCTGGGAACAGCTaGTGTTCAGCGGGGCACTGTGTCCAATACCATCTG +
Preference number: 6 (lower is better)
Translates to: TVAVGSSGAGNS*CSAGHCVQYHL
Trigger: CAGATGGTATTGGACACAGTGCCCCGCTGAACAGCAGCTGTTCCCAGCGCCAGAGGACCCCACAGCCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS GCA 72 bp AGGTCAGTCCATTGCAGCCCTCTAGTCCCTTGGGATTaGTGGCTGCCAGCTCTAGGGGTCCCCCTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: RSVHCSPLVPWD*WLPALGVPLFG
Trigger: GCCAAAGAGGGGGACCCCTAGAGCTGGCAGCCAGCAATCCCAAGGGACTAGAGGGCTGCAATGGACTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CCA 72 bp GCTGCTGTTCAGCGGGGCACTGTGTCCAATACCATCTaGGTCAGGCGAGCTTGTGCTGAGCTCCCTACCAGG +
Preference number: 6 (lower is better)
Translates to: AAVQRGTVSNTI*VRRACAELPTR
Trigger: CCTGGTAGGGAGCTCAGCACAAGCTCGCCTGACCCAGATGGTATTGGACACAGTGCCCCGCTGAACAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS CCA 72 bp TCTCGGGTCCAGACGGGGGAAATGTTACCGTCAAAGTaGCTGTCAAACCAGTCGGAGGCACCGGCATCGCCC +
Preference number: 6 (lower is better)
Translates to: SRVQTGEMLPSK*LSNQSEAPASP
Trigger: GGGCGATGCCGGTGCCTCCGACTGGTTTGACAGCCACTTTGACGGTAACATTTCCCCCGTCTGGACCCGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 72 bp GCCTCTCCCAATCAGAAGGGAGGGCTGGCCGGTCTCTaGCCGCCCCTCTTCTCTCGACTGTGGATTATCGAT +
Preference number: 6 (lower is better)
Translates to: ASPNQKGGLAGL*PPLFSRLWIID
Trigger: ATCGATAATCCACAGTCGAGAGAAGAGGGGCGGTCAGAGACCGGCCAGCCCTCCCTTCTGATTGGGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 72 bp TGCCGCAGCACGACCCTGAAACTGGCACCACTGTCCTaGGCATTCTCTTCCAAAGGAGGAGACAGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: CRSTTLKLAPLS*AFSSKGGDRGG
Trigger: TCCCCCTCTGTCTCCTCCTTTGGAAGAGAATGCCCAGGACAGTGGTGCCAGTTTCAGGGTCGTGCTGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561708.1
CDS CCA 72 bp CACGGCTCAAGGGTGAGAGGGAAGGAGATGTGGAGTTaGCTTCTCAGGGTCGAAAGTGAAGCCCCGCCCACA +
Preference number: 6 (lower is better)
Translates to: HGSRVRGKEMWS*LLRVESEAPPT
Trigger: TGTGGGCGGGGCTTCACTTTCGACCCTGAGAAGCCAACTCCACATCTCCTTCCCTCTCACCCTTGAGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS CAA 72 bp TCCAGGACCTTGAAGGGCACCAGCACGAAGCTGACGTaGGCGGGCAGGTTCTTGGCACTCTCAGGGTACATG +
Preference number: 6 (lower is better)
Translates to: SRTLKGTSTKLT*AGRFLALSGYM
Trigger: CATGTACCCTGAGAGTGCCAAGAACCTGCCCGCCAACGTCAGCTTCGTGCTGGTGCCCTTCAAGGTCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS TCA 72 bp GTGGTTGCTGGGCTTGGTCCTGCCCCCGGACAGCCCTaGGGGCAGTTGTCTACATCCATCTGTACATTATGG +
Preference number: 6 (lower is better)
Translates to: VVAGLGPAPGQP*GQLSTSICTLW
Trigger: CCATAATGTACAGATGGATGTAGACAACTGCCCTCAGGGCTGTCCGGGGGCAGGACCAAGCCCAGCAACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 72 bp GTTGAAGTCTCCAGCCCACTTTTGGGGTCTCCTGGCTaGTTCCAGCAGCTGCATACAAGGCCTCTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: VEVSSPLLGSPG*FQQLHTRPLRL
Trigger: GAGCCTGAGAGGCCTTGTATGCAGCTGCTGGAAGCAGCCAGGAGACCCCAAAAGTGGGCTGGAGACTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 72 bp CAATCACAACAGAGAGCACAGGGGCTTCAGGGGACTTaGGTTCCATGCAAGTGTTGTCCCACCTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: QSQQRAQGLQGT*VPCKCCPTSWP
Trigger: GGGCCAGGAGGTGGGACAACACTTGCATGGAACCCAAGTCCCCTGAAGCCCCTGTGCTCTCTGTTGTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000566097.1
CDS CCA 72 bp GACTTGAACTGGGGCTGCAGCATCATCCACCACCTCTaGACGTCCGGTGGAAGATCCATGTTCTCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: DLNWGCSIIHHL*TSGGRSMFSRV
Trigger: GACCCGAGAGAACATGGATCTTCCACCGGACGTCCAGAGGTGGTGGATGATGCTGCAGCCCCAGTTCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CAA 72 bp CCAATCACAACAGAGAGCACAGGGGCTTCAGGGGACTaGGGTTCCATGCAAGTGTTGTCCCACCTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: PITTESTGASGD*GSMQVLSHLLA
Trigger: GGCCAGGAGGTGGGACAACACTTGCATGGAACCCAAGTCCCCTGAAGCCCCTGTGCTCTCTGTTGTGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000566097.1
CDS GCA 72 bp CGCTGCAGAGATCGAGATCCTTTCCGCAGTAGGTCTTaGCCTTCTGCTTCCCATCTGAGGTGCTGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: RCRDRDPFRSRS*PSASHLRCWSL
Trigger: AAGGGACCAGCACCTCAGATGGGAAGCAGAAGGGCAAGACCTACTGCGGAAAGGATCTCGATCTCTGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS CCA 72 bp TCAATGAACCATGAACAGTCCTGTCAGCTCCGCCGTTaGGGGAGAACCTGGCTGTGTCAGGAGGTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: SMNHEQSCQLRR*GRTWLCQEVWL
Trigger: CAACCACACCTCCTGACACAGCCAGGTTCTCCCCCAACGGCGGAGCTGACAGGACTGTTCATGGTTCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 72 bp GCTCCTGGCTCTAATCCACGGAGACCCCAGCAGCACTaGCTCAAAGGTGCTTCTTCCAATGTTCTGCTGTGC +
Preference number: 6 (lower is better)
Translates to: APGSNPRRPQQH*LKGASSNVLLC
Trigger: GCACAGCAGAACATTGGAAGAAGCACCTTTGAGCCAGTGCTGCTGGGGTCTCCGTGGATTAGAGCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS CAA 90 bp GGGTTCTCGCCAGGCACTATCTGGAACAGCTTCTCCAGCACCTCATaGGTGTTGTGTGACTTGAACTGGGGCTGCAGCATCATCCACCAC +
Preference number: 6 (lower is better)
Translates to: GFSPGTIWNSFSSTS*VLCDLNWGCSIIHH
Trigger: GTGGTGGATGATGCTGCAGCCCCAGTTCAAGTCACACAACACCAATGAGGTGCTGGAGAAGCTGTTCCAGATAGTGCCTGGCGAGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 72 bp TGTGTCCAATACCATCTGGGTCAGGCGAGCTTGTGCTaGGCTCCCTACCAGGGTCCAGGTCTCCTTCCTAAT +
Preference number: 6 (lower is better)
Translates to: CVQYHLGQASLC*APYQGPGLLPN
Trigger: ATTAGGAAGGAGACCTGGACCCTGGTAGGGAGCTCAGCACAAGCTCGCCTGACCCAGATGGTATTGGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS GCA 72 bp CAAGGCCTCTCAGGCTCTGTGTTCAAGAAACGTAGCTaGCCCTCCATTTGTGGCCACAAAGCCAGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: QGLSGSVFKKRS*PSICGHKASRE
Trigger: TTCCCTGCTGGCTTTGTGGCCACAAATGGAGGGGCAGCTACGTTTCTTGAACACAGAGCCTGAGAGGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 72 bp GCCCACTTTTGGGGTCTCCTGGCTGCTTCCAGCAGCTaGATACAAGGCCTCTCAGGCTCTGTGTTCAAGAAA +
Preference number: 6 (lower is better)
Translates to: AHFWGLLAASSS*IQGLSGSVFKK
Trigger: TTTCTTGAACACAGAGCCTGAGAGGCCTTGTATGCAGCTGCTGGAAGCAGCCAGGAGACCCCAAAAGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CAA 90 bp GCCCTTGCAGGCAAGAACAGGGAGAAAAGGCCACTTGTAGGCAGTTaGGGTCTCAGCCATAAGGAAAGGAGCTCAGATCCATGCCAAGCG +
Preference number: 6 (lower is better)
Translates to: ALAGKNREKRPLVGS*GLSHKERSSDPCQA
Trigger: CGCTTGGCATGGATCTGAGCTCCTTTCCTTATGGCTGAGACCCAAACTGCCTACAAGTGGCCTTTTCTCCCTGTTCTTGCCTGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS TCA 72 bp ACAGCTTCTCCAGCACCTCATTGGTGTTGTGTGACTTaGACTGGGGCTGCAGCATCATCCACCACCTCTGGA +
Preference number: 6 (lower is better)
Translates to: TASPAPHWCCVT*TGAAASSTTSG
Trigger: TCCAGAGGTGGTGGATGATGCTGCAGCCCCAGTTCAAGTCACACAACACCAATGAGGTGCTGGAGAAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS TCA 72 bp ATCGATGAGGTATTGCTGGGTCCACTCAATGAACCATaGACAGTCCTGTCAGCTCCGCCGTTGGGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: IDEVLLGPLNEP*TVLSAPPLGEN
Trigger: GTTCTCCCCCAACGGCGGAGCTGACAGGACTGTTCATGGTTCATTGAGTGGACCCAGCAATACCTCATCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 72 bp TGTTCCCTGTCCTTGTTGAAGTCTCCAGCCCACTTTTaGGGTCTCCTGGCTGCTTCCAGCAGCTGCATACAA +
Preference number: 6 (lower is better)
Translates to: CSLSLLKSPAHF*GLLAASSSCIQ
Trigger: TTGTATGCAGCTGCTGGAAGCAGCCAGGAGACCCCAAAAGTGGGCTGGAGACTTCAACAAGGACAGGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CAA 72 bp AACAGCTTCTCCAGCACCTCATTGGTGTTGTGTGACTaGAACTGGGGCTGCAGCATCATCCACCACCTCTGG +
Preference number: 6 (lower is better)
Translates to: NSFSSTSLVLCD*NWGCSIIHHLW
Trigger: CCAGAGGTGGTGGATGATGCTGCAGCCCCAGTTCAAGTCACACAACACCAATGAGGTGCTGGAGAAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342907.3
ENST00000393640.8
CDS CAA 90 bp ATGTTCTGCTGTGCCCATTTAGCAGATCCCACTCTAGGCATGGCCTaGGCTGAACAGTCTGTAGATGGGAAGCCAGGTCCTTGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: MFCCAHLADPTLGMA*AEQSVDGKPGPCLL
Trigger: GAGGAGACAAGGACCTGGCTTCCCATCTACAGACTGTTCAGCCAAGGCCATGCCTAGAGTGGGATCTGCTAAATGGGCACAGCAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS GCA 72 bp AAAACAGGAAGCTCTGTGAGTGTGGGAAAACTCCGCTaGAGAGATCGAGATCCTTTCCGCAGTAGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: KTGSSVSVGKLR*RDRDPFRSRSC
Trigger: GCAAGACCTACTGCGGAAAGGATCTCGATCTCTGCAGCGGAGTTTTCCCACACTCACAGAGCTTCCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000561708.1
ENST00000566097.1
CDS GCA 72 bp CACTGGCTCAAAGGTGCTTCTTCCAATGTTCTGCTGTaGCCATTTAGCAGATCCCACTCTAGGCATGGCCTT +
Preference number: 6 (lower is better)
Translates to: HWLKGASSNVLL*PFSRSHSRHGL
Trigger: AAGGCCATGCCTAGAGTGGGATCTGCTAAATGGGCACAGCAGAACATTGGAAGAAGCACCTTTGAGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS GCA 72 bp AGCAGCACTGGCTCAAAGGTGCTTCTTCCAATGTTCTaGTGTGCCCATTTAGCAGATCCCACTCTAGGCATG +
Preference number: 6 (lower is better)
Translates to: SSTGSKVLLPMF*CAHLADPTLGM
Trigger: CATGCCTAGAGTGGGATCTGCTAAATGGGCACAGCAGAACATTGGAAGAAGCACCTTTGAGCCAGTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567586.1
CDS CAA 72 bp GGCAAGAACAGGGAGAAAAGGCCACTTGTAGGCAGTTaGGGTCTCAGCCATAAGGAAAGGAGCTCAGATCCA +
Preference number: 6 (lower is better)
Translates to: GKNREKRPLVGS*GLSHKERSSDP
Trigger: TGGATCTGAGCTCCTTTCCTTATGGCTGAGACCCAAACTGCCTACAAGTGGCCTTTTCTCCCTGTTCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS GCA 72 bp CCCTCTTCTCTCGACTGTGGATTATCGATGAGGTATTaGTGGGTCCACTCAATGAACCATGAACAGTCCTGT +
Preference number: 6 (lower is better)
Translates to: PSSLDCGLSMRY*WVHSMNHEQSC
Trigger: ACAGGACTGTTCATGGTTCATTGAGTGGACCCAGCAATACCTCATCGATAATCCACAGTCGAGAGAAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8
CDS CCA 72 bp CTCTGTCCACCTGTCGTGGATATACTTGAAGAAGGCTaGGTTGTAGATCTGGACCTTTTCTTTATCCACTCG +
Preference number: 6 (lower is better)
Translates to: LCPPVVDILEEG*VVDLDLFFIHS
Trigger: CGAGTGGATAAAGAAAAGGTCCAGATCTACAACCCAGCCTTCTTCAAGTATATCCACGACAGGTGGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342907.3
ENST00000393640.8
ENST00000567822.1
CDS CCA 72 bp TCTTCTCTCGACTGTGGATTATCGATGAGGTATTGCTaGGTCCACTCAATGAACCATGAACAGTCCTGTCAG +
Preference number: 6 (lower is better)
Translates to: SSLDCGLSMRYC*VHSMNHEQSCQ
Trigger: CTGACAGGACTGTTCATGGTTCATTGAGTGGACCCAGCAATACCTCATCGATAATCCACAGTCGAGAGAAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393640.8