Pregenerated sensors for ST3GAL1-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000261220

Ensembl transcript IDs: ENST00000561761.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCCCATGCACACAAGCAATCTGGAGATGCAGTGAACACCTTGACCTaGGTTTCAGAAAGAGGAAAGCCCACAGGATGTGTCCAGGCAGAC	+
Preference number: 5 (lower is better) Translates to: SHAHKQSGDAVNTLT*VSERGKPTGCVQAD Trigger: GTCTGCCTGGACACATCCTGTGGGCTTTCCTCTTTCTGAAACTCAGGTCAAGGTGTTCACTGCATCTCCAGATTGCTTGTGTGCATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561761.2
CDS CCA 90 bp	CAGCCAAAGCTAAAAGTCTGGTGCATGTTAGAAGCTCTTCTTTGCTaGAAGACGCTGCTGGTGGAGGGGACAGTAGCCGATGTAAGCAGA	+
Preference number: 5 (lower is better) Translates to: QPKLKVWCMLEALLC*KTLLVEGTVADVSR Trigger: TCTGCTTACATCGGCTACTGTCCCCTCCACCAGCAGCGTCTTCCAGCAAAGAAGAGCTTCTAACATGCACCAGACTTTTAGCTTTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561761.2
CDS GCA 90 bp	CTTTATTGGCCCAGACGATATTCCCAGCCAAAGCTAAAAGTCTGGTaGATGTTAGAAGCTCTTCTTTGCTGGAAGACGCTGCTGGTGGAG	+
Preference number: 5 (lower is better) Translates to: LYWPRRYSQPKLKVW*MLEALLCWKTLLVE Trigger: CTCCACCAGCAGCGTCTTCCAGCAAAGAAGAGCTTCTAACATGCACCAGACTTTTAGCTTTGGCTGGGAATATCGTCTGGGCCAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561761.2
CDS CCA 90 bp	ACTCTTTATTGGCCCAGACGATATTCCCAGCCAAAGCTAAAAGTCTaGTGCATGTTAGAAGCTCTTCTTTGCTGGAAGACGCTGCTGGTG	+
Preference number: 5 (lower is better) Translates to: TLYWPRRYSQPKLKV*CMLEALLCWKTLLV Trigger: CACCAGCAGCGTCTTCCAGCAAAGAAGAGCTTCTAACATGCACCAGACTTTTAGCTTTGGCTGGGAATATCGTCTGGGCCAATAAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561761.2
CDS TCA 72 bp	CACAAGCAATCTGGAGATGCAGTGAACACCTTGACCTaGGTTTCAGAAAGAGGAAAGCCCACAGGATGTGTC	+
Preference number: 6 (lower is better) Translates to: HKQSGDAVNTLT*VSERGKPTGCV Trigger: GACACATCCTGTGGGCTTTCCTCTTTCTGAAACTCAGGTCAAGGTGTTCACTGCATCTCCAGATTGCTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561761.2
CDS CCA 72 bp	TGGCCCAGACGATATTCCCAGCCAAAGCTAAAAGTCTaGTGCATGTTAGAAGCTCTTCTTTGCTGGAAGACG	+
Preference number: 6 (lower is better) Translates to: WPRRYSQPKLKV*CMLEALLCWKT Trigger: CGTCTTCCAGCAAAGAAGAGCTTCTAACATGCACCAGACTTTTAGCTTTGGCTGGGAATATCGTCTGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561761.2

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