RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST14 (Homo sapiens)

Ensembl gene IDs: ENSG00000149418

Ensembl transcript IDs: ENST00000278742.6, ENST00000524718.5, ENST00000530376.1, ENST00000530532.5

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTaGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATC +
Preference number: 1 (lower is better)
Translates to: QFQSQTRLFSRVLRA*ASSRAWPKGPTAQI
Trigger: GATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR CCA 90 bp TTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTaGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACT +
Preference number: 1 (lower is better)
Translates to: LEPWRLSSQCMFWGR*CSQRSSLQPAGVHT
Trigger: AGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR TCA 90 bp CCACCAGTGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTaGGGAAGCGAGAGGTTTTCTAGGCAGATTTGGAGCCCTGGAGAT +
Preference number: 1 (lower is better)
Translates to: PPVSSPSTSQLHFGG*GSERFSRQIWSPGD
Trigger: ATCTCCAGGGCTCCAAATCTGCCTAGAAAACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACACTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR CCA 90 bp ACCACCTTCACTGAGGAGGCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACAGCGTGCACACTGGGGTaGACGATGGGTGGCCCCGCA +
Preference number: 2 (lower is better)
Translates to: TTFTEEAPKLRSRCSLETACTLG*TMGGPA
Trigger: TGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGC...TGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGCCTCCTCAGTGAAGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR TCA 90 bp AGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCCCCACCACCTTCACTaGGGAGGCCCCGAAGCTCCG +
Preference number: 2 (lower is better)
Translates to: SLRPVCFPGSSEPGLPQEPHHLH*GGPEAP
Trigger: CGGAGCTTCGGGGCCTCCTCAGTGAAGGTGGTGGGG...CTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR GCA 90 bp CAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCGTGGGTCCAGTCTCCAGCCTaGAGGCGTGCACACTGGGGT +
Preference number: 2 (lower is better)
Translates to: QTRLFSRVLRAWASSRAWVQSPA*RRAHWG
Trigger: ACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGAC...CCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR CCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTTGCAGGCGTGCACACTaGGGTGGACGATGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGCRRAH*GGRWVA
Trigger: GGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCA...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR CCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCAACCTTTGCCCCCAGTTaGGTCAGTAGAACCACCAGT +
Preference number: 2 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPATFAPS*VSRTTS
Trigger: ACTGGTGGTTCTACTGACCCAACTGGGGGCAAAGGT...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR CCA 90 bp CAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCGTGGTCACAGTGTATGTTCTaGGGGCGCTGGTGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: QTRLFSRVLRAWASSRAWSQCMF*GRWCSQ
Trigger: CTGACTGCACCAGCGCCCCCAGAACATACACTGTGA...CCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR TCA 90 bp AGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGTGGAGCCCTGGAGATTaGGTTCACAGTGTATGTTCT +
Preference number: 2 (lower is better)
Translates to: SLRPVCFPGSSEPGLPQEWSPGD*VHSVCS
Trigger: AGAACATACACTGTGAACTCAATCTCCAGGGCTCCA...CTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR CCA 90 bp GGTTTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGTGGACGATGGGTaGCCCCGCAGGTGTACACAT +
Preference number: 2 (lower is better)
Translates to: GFLGRFGALEIEFTVYVLGVDDG*PRRCTH
Trigger: ATGTGTACACCTGCGGGGCCACCCATCGTCCACCCC...CAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR GCA 72 bp GGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTaGAGGCGTGCACACTGGGGTGGACGATGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: GALVQSAVQSPA*RRAHWGGRWVA
Trigger: GGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR CCA 72 bp TCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCGTaGCCCAAGGGCCCCACAGCCCAGATCCGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: SRVLRAWASSRA*PKGPTAQIRQP
Trigger: GGGCTGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR GCA 72 bp GGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTaGACACTGGGGTGGACGATGGGTGGCCCCGCAGGT +
Preference number: 3 (lower is better)
Translates to: GAVSGPVSSLQA*TLGWTMGGPAG
Trigger: ACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR CCA 72 bp TCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTaGGGTGGACGATGGGTGGCCCCGCAGGTGTACACA +
Preference number: 3 (lower is better)
Translates to: SAVQSPACRRAH*GGRWVAPQVYT
Trigger: TGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR CCA 72 bp GGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTaGACGATGGGTGGCCCCGCAGGTGTACACATTTGG +
Preference number: 3 (lower is better)
Translates to: GPVSSLQACTLG*TMGGPAGVHIW
Trigger: CCAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR CCA 72 bp TCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTaGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACA +
Preference number: 3 (lower is better)
Translates to: SQTRLFSRVLRA*ASSRAWPKGPT
Trigger: TGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR-3UTR CAA 90 bp GCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACAGGGGAGGCAGATATGCACCCTCCCAGCTCCACTTaGGAGGCTGAGGAAGCGAGA +
Preference number: 3 (lower is better)
Translates to: APKLRSRCSLETGEADMHPPSST*EAEEAR
Trigger: TCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGG...GTGCATATCTGCCTCCCCTGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR GCA 72 bp ACCTTCACTGAGGAGGCCCCGAAGCTCCGTTCCCGCTaGTCCTTAGAGACAGGGGAGGCAGATATGCACAAA +
Preference number: 3 (lower is better)
Translates to: TFTEEAPKLRSR*SLETGEADMHK
Trigger: TTTGTGCATATCTGCCTCCCCTGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGCCTCCTCAGTGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR TCA 72 bp TCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTaGGGAAGCGAGAGGTTTTCTAGGCAGATTTGGAGC +
Preference number: 3 (lower is better)
Translates to: SSPSTSQLHFGG*GSERFSRQIWS
Trigger: GCTCCAAATCTGCCTAGAAAACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR TCA 72 bp GAGAGGTTTTCTAGGCAGATTTGGAGCCCTGGAGATTaGGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: ERFSRQIWSPGD*VHSVCSGGAGA
Trigger: TGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAAACCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCAGCCGATCAGCACGGCTaGCAGCACCACCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPAADQHG*QHHPAP
Trigger: GGGCGCTGGGTGGTGCTGGCAGCCGTGCTGATCGGC...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCATTGAGCCTGCGCTCCTaGACCCCAGGGGCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPALSLRS*TPGALR
Trigger: GCGCAGCGCCCCTGGGGTGCAGGAGCGCAGGCTCAA...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACCGCTGGCTCTGGTCGTaGAAGCCCAGGAAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: PACRRAHWGGRWVAPQVYRWLWS*KPRKAV
Trigger: GACGGCCTTCCTGGGCTTGCACGACCAGAGCCAGCG...GTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCGCGCTGCGCTGGCTCTaGTCGTGCAAGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSSLQPAGVHTGVDDGWPALRWL*SCKPRK
Trigger: CTTCCTGGGCTTGCACGACCAGAGCCAGCGCAGCGC...GGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCGCGTGCACACTGGGGTaGACGATGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SGPVSSLQACTLGWTMGGACTLG*TMGGPA
Trigger: TGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGC...GCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp CTTAGAGACAGGGGAGGCAGATATGCACAAACGCGCCTCGGCCCAGCTTGGGGCCCCGCGGGGGCAGCATaGCTACGCGCTCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LRDRGGRYAQTRLGPAWGPAGAA*LRAPRP
Trigger: TGGCCGAGGAGCGCGTAGTCATGCTGCCCCCGCGGG...GCCCCAAGCTGGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTGTCTCTAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp AGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCGGAAGCCGGGCGTGGTaGAGCGCATCAGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: SGPVSSLQACTLGWTMGGGSRAW*SASAPH
Trigger: GTGTGGAGCTGATGCGCTTCACCACGCCCGGCTTCC...GCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACATGCGCGGCGTGATCTaGTGCGGCAGGAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PACRRAHWGGRWVAPQVYMRGVI*CGRRFS
Trigger: CGAGAACCTCCTGCCGCAGCAGATCACGCCGCGCAT...GTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACCAGGGGAGGCAGATATaGACAAACGCGCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: PACRRAHWGGRWVAPQVYQGRQI*TNAPRP
Trigger: GGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTG...GTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGCCCGATCGCTCCCCATaGTCCCCGAGGCCGCTCGCG +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQPDRSP*SPRPLA
Trigger: CGCGAGCGGCCTCGGGGACCATGGGGAGCGATCGGG...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGCCAGTGCCTCCATACTaGGTGTGTCCCCAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QSPACRRAHWGGRWVAPQPVPPY*VCPQPV
Trigger: CACGGGCTGGGGACACACCCAGTATGGAGGCACTGG...CTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACATGCAGGCGTGCACACTaGGGTGGACGATGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QPAGVHTGVDDGWPRRCTCRRAH*GGRWVA
Trigger: GGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCA...TGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGCCGTCACCAGGTCGCTaGCGCGCTCGTCGCAGGACG +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQPSPGR*RARRRT
Trigger: CGTCCTGCGACGAGCGCGGCAGCGACCTGGTGACGG...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCGTAGGGGCCCAGGAATaGGACTCCGCTGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: RSSLQPAGVHTGVDDGWPVGAQE*DSAVQQ
Trigger: CTGCTGTACAGCGGAGTCCCATTCCTGGGCCCCTAC...GGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp ACCAGTGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGACGCGCTCCTCGGCCATaGCGCGCTCGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSVLPFYLPAPLWRLRKRRAPRP*RARPPP
Trigger: TGGAGGAGGCCGAGCGCGTCATGGCCGAGGAGCGCG...TCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACACTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTGCCCCGTGCGGCACGTaGACTGCCCCGGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGAPCGT*TAPGMG
Trigger: ACCCATGCCCGGGGCAGTTCACGTGCCGCACGGGGC...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCACACGAGCCTGTCTCGTaGATGACCGCAGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPAHEPVS*MTAAHS
Trigger: ACTGTGGGCTGCGGTCATTCACGAGACAGGCTCGTG...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTCACAGGCGTCGTCCCTaGCGGCGGCCGGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGHRRRP*RRPAPM
Trigger: CATGGGAGCCGGCCGCCGGCAGGGACGACGCCTGTG...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGGTCCACACCGCGGGCGTaGAGGCCAAAGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QACTLGWTMGGPAGVHIWSTPRA*RPKLQL
Trigger: CAGCTGCAGCTTTGGCCTGCACGCCCGCGGTGTGGA...CCAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp GCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGCCCTGGCCCAGAGCATaGAGGCTTACCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGVHTGVDDGWPRRCTHLPWPRA*RLTCQG
Trigger: GCCCTGGCAGGTAAGCCTGCATGCTCTGGGCCAGGG...CAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCGAACTGCCCCGGGCATaGGTCACTGGAGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: SGPVSSLQACTLGWTMGGELPRA*VTGVVG
Trigger: TCCTACGACTCCAGTGACCCATGCCCGGGGCAGTTC...GCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGAACACCTGAAGGTCTaGGCCGGACAACTGCACCCC +
Preference number: 4 (lower is better)
Translates to: RWCSQRSSLQPAGVHTGVEHLKV*AGQLHP
Trigger: GGGGTGCAGTTGTCCGGCCCAGACCTTCAGGTGTTC...CACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGCCGGCAGGGAAGACATaGGAGGCGTCCGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQPAGKT*EASGRQ
Trigger: CTGCCTGCCGGACGCCTCCCATGTCTTCCCTGCCGG...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGCTCACCACACCGGCCTaGAAGATCCGCCCATCCGCC +
Preference number: 4 (lower is better)
Translates to: AGVHTGVDDGWPRRCTHLLTTPA*KIRPSA
Trigger: GGCGGATGGGCGGATCTTCCAGGCCGGTGTGGTGAG...CAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGGGTGGACGATGGGTaGCCCCGCAGGTGTACACAT +
Preference number: 4 (lower is better)
Translates to: AVSGPVSSLQACTLGWTMGVDDG*PRRCTH
Trigger: ATGTGTACACCTGCGGGGCCACCCATCGTCCACCCC...CATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp CGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCGGTAGTAGGGGCTGTTaGATGTCCCCTGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: RSSLQPAGVHTGVDDGWPGSRGC*MSPGLY
Trigger: GTAAAGCCCAGGGGACATTCAACAGCCCCTACTACC...GGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp GCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGCCTCCTCCACCAGGTaGTGCGGGATGCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: AVSGPVSSLQACTLGWTMASSTR*CGMLNS
Trigger: TGAGTTCAGCATCCCGCAGCACCTGGTGGAGGAGGC...CATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGGCATCGCTGTGGTCGGTaGAGTCGGCCCAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: QACTLGWTMGGPAGVHIWHRCGR*SRPSHH
Trigger: GTGATGGCTGGGCCGACTGCACCGACCACAGCGATG...CCAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCACGGATCTCACCCTTTTaGAGGATCAGCGCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPARISPF*RISAPV
Trigger: CACTGGCGCGCTGATCCTGCAAAAGGGTGAGATCCG...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCGCAGGTGTACACATTTaGGTGGCCCCGGCCCCTATA +
Preference number: 4 (lower is better)
Translates to: CSGGAGAVSGPVSSLQACAGVHI*VAPAPI
Trigger: TATAGGGGCCGGGGCCACCCAAATGTGTACACCTGC...GCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp TGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCAGCCTGTCTCGTGAATaGCCGCAGCCCACAGTCGCA +
Preference number: 4 (lower is better)
Translates to: CMFWGRWCSQRSSLQPAGSLSRE*PQPTVA
Trigger: TGCGACTGTGGGCTGCGGTCATTCACGAGACAGGCT...GCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp GGCGGGGGAGGCTGTGTCTTCAAACCTTTGCCCCCAGTTGGGTCAGTAGAACCATGTGTCCCCAGCCCGTaGCCCAGATGGCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: GGGGCVFKPLPPVGSVEPCVPSP*PRWPCR
Trigger: CCGGCAAGGCCATCTGGGTCACGGGCTGGGGACACA...TGGTTCTACTGACCCAACTGGGGGCAAAGGTTTGAAGACACAGCCTCCCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp CAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGCCCCAGTGTTCTCTTTaGTCCAGTCCCGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: QSPACRRAHWGGRWVAPQPQCSL*SSPETE
Trigger: CTCTGTTTCGGGACTGGATCAAAGAGAACACTGGGG...CTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp GCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGCAGCGCCCCGGGCCATaGTTTTCCACCTTCTTGACG +
Preference number: 4 (lower is better)
Translates to: AGVHTGVDDGWPRRCTHLQRPGP*FSTFLT
Trigger: CGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCGCTG...CAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp TGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCCTTGGGGCAGGTaGCCGCAGGCACGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: WRLSSQCMFWGRWCSQRSSPWGR*PQARRA
Trigger: AGCCCGGCGTGCCTGCGGGCACCTGCCCCAAGGACT...GGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CTTAGAGACAGGGGAGGCAGATATGCACAAACGCGCCTCGGCCCAGCTTGGGGCGTCCAGTCTCCAGCCTaGAGGCGTGCACACTGGGGT +
Preference number: 4 (lower is better)
Translates to: LRDRGGRYAQTRLGPAWGVQSPA*RRAHWG
Trigger: ACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGAC...GCCCCAAGCTGGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTGTCTCTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGTTCTGGGGGCGCTGGTaGAGTCAGCGGTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQFWGRW*SQRSSL
Trigger: GAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAA...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACCTTGACGTTGTTGACTaGCAGGAACTCCACGCCTTC +
Preference number: 4 (lower is better)
Translates to: PACRRAHWGGRWVAPQVYLDVVD*QELHAF
Trigger: GAAGGCGTGGAGTTCCTGCCAGTCAACAACGTCAAG...GTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCCCAGGGGCGCTGCGCTaGCTCTGGTCGTGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: QFQSQTRLFSRVLRAWASPGALR*LWSCKP
Trigger: GGGCTTGCACGACCAGAGCCAGCGCAGCGCCCCTGG...GGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp TGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCTGTGTTTGGTACAAGTaGCGACGTTCACCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CSGGAGAVSGPVSSLQACCVWYK*RRSPWG
Trigger: GCCCCAAGGTGAACGTCGTCACTTGTACCAAACACA...GCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp AGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGGCTTGTTCCTCTaGGCGCAGCCGTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSQCMFWGRWCSQRSSLQPGLFL*AQPSPQ
Trigger: CTGGGGAGACGGCTGCGCTCAGAGGAACAAGCCAGG...CTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp GCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACAGGGGAGGCAGATATGCACAGGAGGGAGGGTAGGTaGCACACAACTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: APKLRSRCSLETGEADMHRREGR*HTTAPG
Trigger: CCCTGGTGCAGTTGTGTGGCACCTACCCTCCCTCCT...GTGCATATCTGCCTCCCCTGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCCTCAAAGCCGGGATaGCGCCGCTCAGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQASKPG*RRSVLV
Trigger: AACCAACACTGAGCGGCGGCATCCCGGCTTTGAGGC...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGGTGCGGCACGTGAACTaGCCCGGGCATGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SSQCMFWGRWCSQRSSLQVRHVN*PGHGSL
Trigger: CAGTGACCCATGCCCGGGGCAGTTCACGTGCCGCAC...CTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGTCCTTCCCATTGCACTaGTGGCTTTTCGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RWCSQRSSLQPAGVHTGVSFPLH*WLFERH
Trigger: GTGCCTCTCGAAAAGCCAGCAGTGCAATGGGAAGGA...CACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGAGGAAGGCCGTCCACTaGGTGGGGTCTGAGTACCTG +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQRKAVH*VGSEYL
Trigger: CAGGTACTCAGACCCCACGCAGTGGACGGCCTTCCT...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCACGTCCTTCACCTTGCTaGCCAGGCTTACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPARPSPC*PGLQTQ
Trigger: CTGAGTTTGTAAGCCTGGCCAGCAAGGTGAAGGACG...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCTCCTCTGTACTGTTTTaGAGTCCGTGGGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RSSLQPAGVHTGVDDGWPSSVLF*SPWGKP
Trigger: TGGCTTTCCCCACGGACTCCAAAACAGTACAGAGGA...GGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp ACCACCTTCACTGAGGAGGCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACAGGGCGTGGGGCTCCATaGGGCTCAGGGTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: TTFTEEAPKLRSRCSLETGRGAP*GSGCCT
Trigger: TGTACAACACCCTGAGCCCCATGGAGCCCCACGCCC...TGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGCCTCCTCAGTGAAGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp ACCACCTTCACTGAGGAGGCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACACCGCAGATGTGGCCCTaGCCCAGAGCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TTFTEEAPKLRSRCSLETPQMWP*PRACRL
Trigger: AAGCCTGCATGCTCTGGGCCAGGGCCACATCTGCGG...TGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGCCTCCTCAGTGAAGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCACTGGGGTGGACGATaGGTGGCCCCGCAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: SLRPVCFPGSSEPGLPQEHWGGR*VAPQVY
Trigger: GTACACCTGCGGGGCCACCCATCGTCCACCCCAGTG...CTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGCTCCCAGCTCCACTTTaGAGGCTGAGGAAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: AGVHTGVDDGWPRRCTHLLPAPL*RLRKRE
Trigger: CTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAG...CAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTGCTTCCTCAAGAGCGTaGCCCAAGGGCCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGASSRA*PKGPTA
Trigger: GGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGC...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCAAGTATTTCTCCCCGTTaGTCTCCACGTAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPASISPR*SPRSPW
Trigger: CCAAGGACTACGTGGAGATCAACGGGGAGAAATACT...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp TGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCAGTGGAAGCGAACTGTaGTCTTGTTGCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSGGAGAVSGPVSSLQACSGSEL*SCCCCW
Trigger: CCAGCAACAGCAACAAGATCACAGTTCGCTTCCACT...GCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp GCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACAGGGGAGGCAGATATGCACGCAGTCCTTCTCATCTaGGCCGTCGCTACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: APKLRSRCSLETGEADMHAVLLI*AVATVL
Trigger: GAGGACTGTAGCGACGGCTCAGATGAGAAGGACTGC...GTGCATATCTGCCTCCCCTGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp GCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACAGGGGAGGCAGATATGCACCCACTGCGTGGGGTCTaGGTACCTGAATCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: APKLRSRCSLETGEADMHPLRGV*VPESSV
Trigger: GACAGAGGATTCAGGTACTCAGACCCCACGCAGTGG...GTGCATATCTGCCTCCCCTGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp GCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGCTCCACTTTGGAGGCTaGGGAAGCGAGAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AVSGPVSSLQACTLGWTMLHFGG*GSERFS
Trigger: AGAAAACCTCTCGCTTCCTCAGCCTCCAAAGTGGAG...CATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCAGTCGTCCTTCCCATTaGACTGCTGGCTTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: SGPVSSLQACTLGWTMGGSRPSH*TAGFSR
Trigger: TCTCGAAAAGCCAGCAGTGCAATGGGAAGGACGACT...GCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGCGTCACACTCAGGGTTaGCCTTGCTCAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQRHTQG*PCSSRA
Trigger: GGCTCTGCTTGAGCAAGGGCAACCCTGAGTGTGACG...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp GGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCACGCGGCGTGATCTGCTaGGGCAGGAGGTTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GALEIEFTVYVLGALVQSRGVIC*GRRFSQ
Trigger: CTGCGAGAACCTCCTGCCGCAGCAGATCACGCCGCG...TGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp GGCGGGGGAGGCTGTGTCTTCAAACCTTTGCCCCCAGTTGGGTCAGTAGAACCATCCAGCCTGCAGGCGTaGACACTGGGGTGGACGATG +
Preference number: 4 (lower is better)
Translates to: GGGGCVFKPLPPVGSVEPSSLQA*TLGWTM
Trigger: CATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGA...TGGTTCTACTGACCCAACTGGGGGCAAAGGTTTGAAGACACAGCCTCCCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCGTGGAAGCTCCGTTCCCGCTaGTCCTTAGAGACAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QTRLFSRVLRAWASSRAWKLRSR*SLETGE
Trigger: CTCCCCTGTCTCTAAGGAGCAGCGGGAACGGAGCTT...CCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGGATGAGCAGGACGTTCTaGGAGGAGTGGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QACTLGWTMGGPAGVHIWMSRTF*EEWKVR
Trigger: CCTGACCTTCCACTCCTCCCAGAACGTCCTGCTCAT...CCAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGTCTCCACGTAGTCCTTaGGGCAGGTGCCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSQCMFWGRWCSQRSSLQSPRSP*GRCPQA
Trigger: TGCCTGCGGGCACCTGCCCCAAGGACTACGTGGAGA...CTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCATTCCCATTGCACTGCTaGCTTTTCGAGAGGCACTTC +
Preference number: 4 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPAFPLHC*LFERHF
Trigger: GAAGTGCCTCTCGAAAAGCCAGCAGTGCAATGGGAA...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGGAAGCACCGCAGATGTaGCCCTGGCCCAGAGCATGC +
Preference number: 4 (lower is better)
Translates to: SLRPVCFPGSSEPGLPQEEAPQM*PWPRAC
Trigger: GCATGCTCTGGGCCAGGGCCACATCTGCGGTGCTTC...CTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CTTAGAGACAGGGGAGGCAGATATGCACAAACGCGCCTCGGCCCAGCTTGGGGCAGATGGGCCGCACCATaGAGCTGTACTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: LRDRGGRYAQTRLGPAWGRWAAP*SCTLPV
Trigger: AACCGGCAGAGTACAGCTCCATGGTGCGGCCCATCT...GCCCCAAGCTGGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTGTCTCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCCATCCGCCTCCACGCTaGACAGGGGTCCCCCGGAAT +
Preference number: 4 (lower is better)
Translates to: WRLSSQCMFWGRWCSQRSHPPPR*TGVPRN
Trigger: ATTCCGGGGGACCCCTGTCCAGCGTGGAGGCGGATG...GGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGAGGGTCCTCCGAGCCTaGGCTTCCTCAAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: SSQCMFWGRWCSQRSSLQRVLRA*ASSRAW
Trigger: CCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCT...CTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp CAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QFQSQTRLFSRVLRAWASAGSCT*VPRRSP
Trigger: AGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGC...GGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp ACCACCTTCACTGAGGAGGCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACAGGTGCTGCGGGATGCTaGACTCAGACCAGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: TTFTEEAPKLRSRCSLETGAAGC*TQTSSR
Trigger: CCTACTACTGGTCTGAGTTCAGCATCCCGCAGCACC...TGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGCCTCCTCAGTGAAGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp CTTAGAGACAGGGGAGGCAGATATGCACAAACGCGCCTCGGCCCAGCTTGGGGCAAGCCACCACTGAGGTaGCCACAAAGGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LRDRGGRYAQTRLGPAWGKPPLR*PQRTSG
Trigger: CCCTGAAGTCCTTTGTGGTCACCTCAGTGGTGGCTT...GCCCCAAGCTGGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTGTCTCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp CAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCGTGGGGGGAAAGCCACCACTaGGGTGACCACAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: QTRLFSRVLRAWASSRAWGESHH*GDHKGL
Trigger: AAGTCCTTTGTGGTCACCTCAGTGGTGGCTTTCCCC...CCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGTCAAGCAGAGCCCATTaGGGCAGCGGTAGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQSSRAH*GSGRCV
Trigger: AACACACCTACCGCTGCCTCAATGGGCTCTGCTTGA...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp CAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCACATCATGCGCGGCGTaGTCTGCTGCGGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QFQSQTRLFSRVLRAWASTSCAA*SAAAGG
Trigger: ACCTCCTGCCGCAGCAGATCACGCCGCGCATGATGT...GGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCATTCACTTTCTCGTaGCGGGAGTTGTACTTGAGT +
Preference number: 4 (lower is better)
Translates to: SGPVSSLQACTLGWTMGGPFTFS*RELYLS
Trigger: ACTCAAGTACAACTCCCGGCACGAGAAAGTGAATGG...GCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp ACCAGTGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGGACAACTGCACCCCTaGTCGTCGCTGTTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: TSVLPFYLPAPLWRLRKRGQLHP*SSLLSP
Trigger: CGGAGACAACAGCGACGAGCAGGGGTGCAGTTGTCC...TCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCCTCATCCGCATCCGTaGCCCCAACAACACGAGCCT +
Preference number: 4 (lower is better)
Translates to: SLRPVCFPGSSEPGLPQEPHPHP*PQQHEP
Trigger: AGGCTCGTGTTGTTGGGGGCACGGATGCGGATGAGG...CTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGCCTGGGCTTCCTCAAGAGCGTGGCCCAAGGGCCCCACAGCCCAGATCCGGCATCACATGCTGGTTGTTaGGCACCTCAATGTTCCATG +
Preference number: 4 (lower is better)
Translates to: SLGFLKSVAQGPHSPDPASHAGC*APQCSM
Trigger: CATGGAACATTGAGGTGCCCAACAACCAGCATGTGA...TGCCGGATCTGGGCTGTGGGGCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGTTGAGCTCATCGCTGTaGTCGGTGCAGTCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSQCMFWGRWCSQRSSLQLSSSL*SVQSAQ
Trigger: CTGGGCCGACTGCACCGACCACAGCGATGAGCTCAA...CTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTTTGCACGTGAACTGGTaGCCGGCGTCGCAACTGCAG +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGLHVNW*PASQLQ
Trigger: CTGCAGTTGCGACGCCGGCCACCAGTTCACGTGCAA...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTATGTTCTGGGGGCGCTaGTGCAGTCAGCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGMFWGR*CSQRSS
Trigger: ACTGGACCGCTGACTGCACCAGCGCCCCCAGAACAT...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGGACCTTTGCCCCCAGTTaGGTCAGTAGAACCACCAGT +
Preference number: 4 (lower is better)
Translates to: QACTLGWTMGGPAGVHIWTFAPS*VSRTTS
Trigger: ACTGGTGGTTCTACTGACCCAACTGGGGGCAAAGGT...CCAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp GGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCACGTCGCAACTGCAGTTaGGCTCATCGCTGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: GALEIEFTVYVLGALVQSRRNCS*AHRCGR
Trigger: CCGACCACAGCGATGAGCTCAACTGCAGTTGCGACG...TGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp TGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCACTTGTTCTTGCACGTaGACTGGTGGCCGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: WRLSSQCMFWGRWCSQRSTCSCT*TGGRRR
Trigger: GCGACGCCGGCCACCAGTTCACGTGCAAGAACAAGT...GGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp ACCAGTGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGATCCCATTGGAACACCTaGAGGTCTGGGCCGGACAAC +
Preference number: 4 (lower is better)
Translates to: TSVLPFYLPAPLWRLRKRSHWNT*RSGPDN
Trigger: GTTGTCCGGCCCAGACCTTCAGGTGTTCCAATGGGA...TCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp GCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGTGGAGCCCTGGAGATTaGGTTCACAGTGTATGTTCT +
Preference number: 4 (lower is better)
Translates to: AVSGPVSSLQACTLGWTMWSPGD*VHSVCS
Trigger: AGAACATACACTGTGAACTCAATCTCCAGGGCTCCA...CATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp GGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGGATCAGCGCGCCAGTaGCTCCATACTGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GALEIEFTVYVLGALVQSGSARQ*LHTGCV
Trigger: GACACACCCAGTATGGAGGCACTGGCGCGCTGATCC...TGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTGGGTGGGTAGTGGCCTaGGTAGTAGGGGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGGWVVA*VVGAVE
Trigger: TTCAACAGCCCCTACTACCCAGGCCACTACCCACCC...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCGTGGATGTGCAGTCAATGTTaGGTGGGTAGTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QTRLFSRVLRAWASSRAWMCSQC*VGSGLG
Trigger: ACCCAGGCCACTACCCACCCAACATTGACTGCACAT...CCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp ACCAGTGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGATTCTTGCACGTGAACTaGTGGCCGGCGTCGCAACTG +
Preference number: 4 (lower is better)
Translates to: TSVLPFYLPAPLWRLRKRFLHVN*WPASQL
Trigger: CAGTTGCGACGCCGGCCACCAGTTCACGTGCAAGAA...TCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCGTGTACACATTTGGGTaGCCCCGGCCCCTATACCCC +
Preference number: 4 (lower is better)
Translates to: WRLSSQCMFWGRWCSQRSVYTFG*PRPLYP
Trigger: GGGGTATAGGGGCCGGGGCCACCCAAATGTGTACAC...GGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp AGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGGTGTAGGACTGATCTaGGTGGAAGCGAACTGTGAT +
Preference number: 4 (lower is better)
Translates to: SVCSGGAGAVSGPVSSLQGVGLI*VEANCD
Trigger: ATCACAGTTCGCTTCCACTCAGATCAGTCCTACACC...CTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp TGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCGCCAGTTGGGAGAGATaGGGGAAGCACCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: WRLSSQCMFWGRWCSQRSASWER*GKHRRC
Trigger: ACATCTGCGGTGCTTCCCTCATCTCTCCCAACTGGC...GGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp ACCACCTTCACTGAGGAGGCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACACCCAGAAGAGGGGCTTaGAGAACTTGTTCTTGCACG +
Preference number: 4 (lower is better)
Translates to: TTFTEEAPKLRSRCSLETPRRGA*RTCSCT
Trigger: CGTGCAAGAACAAGTTCTGCAAGCCCCTCTTCTGGG...TGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGCCTCCTCAGTGAAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTCCGGGCATGGGTCACTaGAGTCGTAGGAGAGGTATT +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGPGMGH*SRRRGI
Trigger: AATACCTCTCCTACGACTCCAGTGACCCATGCCCGG...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGCCCCCGGAATCACCCTaGCAGGAGTCCACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: FLGRFGALEIEFTVYVLGPPESP*QESTPP
Trigger: CGGCGGCGTGGACTCCTGCCAGGGTGATTCCGGGGG...CCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTCCTTGTGTACACGCCTaGCTTGTTCCTCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGPCVHA*LVPLSA
Trigger: TGCGCTCAGAGGAACAAGCCAGGCGTGTACACAAGG...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp AGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGATCGATGTAGCAGTGTaGGGCAGAGACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSQCMFWGRWCSQRSSLQIDVAV*GRDQPV
Trigger: AACTGGCTGGTCTCTGCCGCACACTGCTACATCGAT...CTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCACCATTGAAGACCTTCTaGACACGCACGTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: GALEIEFTVYVLGALVQSPLKTF*TRTSRY
Trigger: GTACCGGGACGTGCGTGTCCAGAAGGTCTTCAATGG...TGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GCCCCGAAGCTCCGTTCCCGCTGCTCCTTAGAGACAGGGGAGGCAGATATGCACCAAACTCAGTGGAGTTaGAGTTCTCGTAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: APKLRSRCSLETGEADMHQTQWS*SSRRHP
Trigger: TGGATGCCTACGAGAACTCCAACTCCACTGAGTTTG...GTGCATATCTGCCTCCCCTGTCTCTAAGGAGCAGCGGGAACGGAGCTTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGGCAGCTGGAAGAAGGTaGCCTCAAAGCCGGGATGCC +
Preference number: 4 (lower is better)
Translates to: LGRFGALEIEFTVYVLGAAAGRR*PQSRDA
Trigger: GGCATCCCGGCTTTGAGGCCACCTTCTTCCAGCTGC...CGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp AGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCTCATCCTAGGCAGCTaGAAGAAGGTGGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SLRPVCFPGSSEPGLPQELILGS*KKVASK
Trigger: CTTTGAGGCCACCTTCTTCCAGCTGCCTAGGATGAG...CTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GGCGGGGGAGGCTGTGTCTTCAAACCTTTGCCCCCAGTTGGGTCAGTAGAACCACTGTTGAATGTCCCCTaGGCTTTACGTAAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GGGGCVFKPLPPVGSVEPLLNVP*ALRKRP
Trigger: AGGCCGCTTACGTAAAGCCCAGGGGACATTCAACAG...TGGTTCTACTGACCCAACTGGGGGCAAAGGTTTGAAGACACAGCCTCCCCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCATCACAGTGTATGTTCTaGGGGCGCTGGTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GALEIEFTVYVLGALVQSSQCMF*GRWCSQ
Trigger: CTGACTGCACCAGCGCCCCCAGAACATACACTGTGA...TGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
3UTR CAA 72 bp CACCAGTGTCCTCCCCTTCTACCTCCCAGCTCCACTTaGGAGGCTGAGGAAGCGAGAGGTTTTCTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HQCPPLLPPSST*EAEEARGFLGR
Trigger: TCTGCCTAGAAAACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACACTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCAAGCGCACCTTCACATaGTGGTTGTTGGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: QFQSQTRLFSRVLRAWASKRTFT*WLLGTS
Trigger: TGAGGTGCCCAACAACCAGCATGTGAAGGTGCGCTT...GGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTTCATTGAAGAAGGGGTaGGAGATGATGCGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGSLKKG*EMMRLS
Trigger: GCTCAAGCGCATCATCTCCCACCCCTTCTTCAATGA...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp TGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCTCCTCATGTAGCCATTaGAGACCTTCTGGACACGCA +
Preference number: 4 (lower is better)
Translates to: WRLSSQCMFWGRWCSQRSSSCSH*RPSGHA
Trigger: TGCGTGTCCAGAAGGTCTTCAATGGCTACATGAGGA...GGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp CTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGTCCCGGTACTGCAAATaGCACACCAGGAAGCCGATC +
Preference number: 4 (lower is better)
Translates to: LGRFGALEIEFTVYVLGASRYCK*HTRKPI
Trigger: GATCGGCTTCCTGGTGTGGCATTTGCAGTACCGGGA...CGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GGCGGGGGAGGCTGTGTCTTCAAACCTTTGCCCCCAGTTGGGTCAGTAGAACCAGCAGATTTGGAGCCCTaGAGATTGAGTTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GGGGCVFKPLPPVGSVEPADLEP*RLSSQC
Trigger: ACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGC...TGGTTCTACTGACCCAACTGGGGGCAAAGGTTTGAAGACACAGCCTCCCCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp CAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCGCAGGTAGAAGAATTTaGAGCGCACCTTCACATGCT +
Preference number: 4 (lower is better)
Translates to: QFQSQTRLFSRVLRAWASAGRRI*SAPSHA
Trigger: AGCATGTGAAGGTGCGCTTCAAATTCTTCTACCTGC...GGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp TTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGTGTTGCTGTTGCTGGTaGCGACGAACTGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: FLGRFGALEIEFTVYVLGCCCCW*RRTGTS
Trigger: AGAGGTCCCAGTTCGTCGTCACCAGCAACAGCAACA...CCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp CTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGGGCTTACAAACTCAGTaGAGTTGGAGTTCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LGRFGALEIEFTVYVLGAGLQTQ*SWSSRR
Trigger: CCTACGAGAACTCCAACTCCACTGAGTTTGTAAGCC...CGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR GCA 90 bp GGTTTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGCATGGAGCTGTACTCTaGCGGTTTCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GFLGRFGALEIEFTVYVLHGAVL*RFLQLQ
Trigger: CTGGAGCTGGAGAAACCGGCAGAGTACAGCTCCATG...CAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp TTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCAGTCAATGTTGGGTaGGTAGTGGCCTGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: FLGRFGALEIEFTVYVLGAVNVG*VVAWVV
Trigger: TACTACCCAGGCCACTACCCACCCAACATTGACTGC...CCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GGTTTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGCTGGTGACGACGAACTaGGACCTCTCTCCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: GFLGRFGALEIEFTVYVLLVTTN*DLSPQY
Trigger: ATACTGCGGAGAGAGGTCCCAGTTCGTCGTCACCAG...CAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CCA 90 bp GGTTTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGTTCTCGCAGGTGGTCTaGTTGATGACGCGGATCTCA +
Preference number: 4 (lower is better)
Translates to: GFLGRFGALEIEFTVYVLFSQVV*LMTRIS
Trigger: TGAGATCCGCGTCATCAACCAGACCACCTGCGAGAA...CAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR TCA 90 bp GGTTTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGTGGGGTCTGAGTACCTaGATCCTCTGTCATCGATGT +
Preference number: 4 (lower is better)
Translates to: GFLGRFGALEIEFTVYVLWGLST*ILCHRC
Trigger: ACATCGATGACAGAGGATTCAGGTACTCAGACCCCA...CAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS TCA 90 bp AGCGGGCATGAGCGGGGTAGGGGCTGTCAGGGAAGCCGGGCGTGGTaGAGCGCATCAGCTCCACACCGCGGGCGTGCAGGCCAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SGHERGRGCQGSRAW*SASAPHRGRAGQSC
Trigger: GCAGCTTTGGCCTGCACGCCCGCGGTGTGGAGCTGATGCGCTTCACCACGCCCGGCTTCCCTGACAGCCCCTACCCCGCTCATGCCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS CCA 90 bp ATGATGCGCTTGAGCCTGCGCTCCTGCACCCCAGGGGCGCTGCGCTaGCTCTGGTCGTGCAAGCCCAGGAAGGCCGTCCACTGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: MMRLSLRSCTPGALR*LWSCKPRKAVHCVG
Trigger: CCCCACGCAGTGGACGGCCTTCCTGGGCTTGCACGACCAGAGCCAGCGCAGCGCCCCTGGGGTGCAGGAGCGCAGGCTCAAGCGCATCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 90 bp GCGCCCAGAGCGACTCCAGGACACATGGGCGGCTCGGGGCACACCTaGGCCTGCCATCTGCAGAGGCCCTTCCCCAGCTCCTCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: APRATPGHMGGSGHT*ACHLQRPFPSSSCV
Trigger: GACACAAGAGGAGCTGGGGAAGGGCCTCTGCAGATGGCAGGCCCAGGTGTGCCCCGAGCCGCCCATGTGTCCTGGAGTCGCTCTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530532.5
CDS GCA 90 bp CATCAGCTCCACACCGCGGGCGTGCAGGCCAAAGCTGCAGCTGTCTaGGCAGGAGACAAGAAGGAGGGCACGTGTGGGGGCAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: HQLHTAGVQAKAAAV*AGDKKEGTCGGRAG
Trigger: CCCAGCCCTGCCCCCACACGTGCCCTCCTTCTTGTCTCCTGCGCAGACAGCTGCAGCTTTGGCCTGCACGCCCGCGGTGTGGAGCTGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530376.1
CDS-3UTR CAA 90 bp CAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGTTCTCGTGCCGGGAGTaGTACTTGAGTCCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: QSPACRRAHWGGRWVAPQFSCRE*YLSPAP
Trigger: CGGCGCGGGACTCAAGTACAACTCCCGGCACGAGAA...CTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp AGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCGTGACGACGTTCACCTaGGGGCAGGAGGCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: SGPVSSLQACTLGWTMGGVTTFT*GQEASS
Trigger: CGACGAGGCCTCCTGCCCCAAGGTGAACGTCGTCAC...GCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 90 bp ACGCCGCCGCTGAGGAAGCCCACGCACATCATGCGCGGCGTGATCTaGTGCGGCAGGAGGTTCTCGCAGGTGGTCTGGTTGATGACGCGG +
Preference number: 5 (lower is better)
Translates to: TPPLRKPTHIMRGVI*CGRRFSQVVWLMTR
Trigger: CCGCGTCATCAACCAGACCACCTGCGAGAACCTCCTGCCGCAGCAGATCACGCCGCGCATGATGTGCGTGGGCTTCCTCAGCGGCGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 90 bp GGGAAGCCGGGCGTGGTGAAGCGCATCAGCTCCACACCGCGGGCGTaGAGGCCAAAGCTGCAGCTGTCTGCGCAGGAGACAAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GKPGVVKRISSTPRA*RPKLQLSAQETRRR
Trigger: CCTCCTTCTTGTCTCCTGCGCAGACAGCTGCAGCTTTGGCCTGCACGCCCGCGGTGTGGAGCTGATGCGCTTCACCACGCCCGGCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530376.1
CDS CCA 90 bp AGGGAGGGTAGGTGCCACACAACTGCACCAGGGCGTGGGGCTCCATaGGGCTCAGGGTGTTGTACACCGTCACCAGGTCGCTGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: REGRCHTTAPGRGAP*GSGCCTPSPGRCRA
Trigger: AGCGCGGCAGCGACCTGGTGACGGTGTACAACACCCTGAGCCCCATGGAGCCCCACGCCCTGGTGCAGTTGTGTGGCACCTACCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS GCA 90 bp GAAGCACCGCAGATGTGGCCCTGGCCCAGAGCATGCAGGCTTACCTaGCAGGGCCACTCGCCCTCATCCGCATCCGTGCCCCCAACAACA +
Preference number: 5 (lower is better)
Translates to: EAPQMWPWPRACRLT*QGHSPSSASVPPTT
Trigger: TGTTGTTGGGGGCACGGATGCGGATGAGGGCGAGTGGCCCTGGCAGGTAAGCCTGCATGCTCTGGGCCAGGGCCACATCTGCGGTGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 90 bp CCGCCGCTGAGGAAGCCCACGCACATCATGCGCGGCGTGATCTGCTaGGGCAGGAGGTTCTCGCAGGTGGTCTGGTTGATGACGCGGATC +
Preference number: 5 (lower is better)
Translates to: PPLRKPTHIMRGVIC*GRRFSQVVWLMTRI
Trigger: GATCCGCGTCATCAACCAGACCACCTGCGAGAACCTCCTGCCGCAGCAGATCACGCCGCGCATGATGTGCGTGGGCTTCCTCAGCGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 90 bp AGAGCGACTCCAGGACACATGGGCGGCTCGGGGCACACCTGGGCCTaGCATCTGCAGAGGCCCTTCCCCAGCTCCTCTTGTGTCATCCCT +
Preference number: 5 (lower is better)
Translates to: RATPGHMGGSGHTWA*HLQRPFPSSSCVIP
Trigger: AGGGATGACACAAGAGGAGCTGGGGAAGGGCCTCTGCAGATGGCAGGCCCAGGTGTGCCCCGAGCCGCCCATGTGTCCTGGAGTCGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530532.5
CDS CCA 90 bp TGGCCTTGCCGGCAGGGAAGACATGGGAGGCGTCCGGCAGGCAGATaGGCCGCACCATGGAGCTGTACTCTGCCGGTTTCTCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: WPCRQGRHGRRPAGR*AAPWSCTLPVSPAP
Trigger: TGGAGCTGGAGAAACCGGCAGAGTACAGCTCCATGGTGCGGCCCATCTGCCTGCCGGACGCCTCCCATGTCTTCCCTGCCGGCAAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp AGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCTGCTCGTCGCTGTaGTCTCCGCAGTCGTTCACA +
Preference number: 5 (lower is better)
Translates to: SGPVSSLQACTLGWTMGGPCSSL*SPQSFT
Trigger: TGTGAACGACTGCGGAGACAACAGCGACGAGCAGGG...GCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGCCGTCACACTCAGGGTaGCCCTTGCTCAAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RWCSQRSSLQPAGVHTGVPSHSG*PLLKQS
Trigger: GCTCTGCTTGAGCAAGGGCAACCCTGAGTGTGACGG...CACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp TGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCCCTCCCAGCTCCACTTaGGAGGCTGAGGAAGCGAGA +
Preference number: 5 (lower is better)
Translates to: CSGGAGAVSGPVSSLQACPPSST*EAEEAR
Trigger: TCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGG...GCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 90 bp GGGAAGCCGGGCGTGGTGAAGCGCATCAGCTCCACACCGCGGGCGTaGAGGCCAAAGCTGCAGCTGTTGTCCTGGGTCCTCTGTACTGTT +
Preference number: 5 (lower is better)
Translates to: GKPGVVKRISSTPRA*RPKLQLLSWVLCTV
Trigger: AACAGTACAGAGGACCCAGGACAACAGCTGCAGCTTTGGCCTGCACGCCCGCGGTGTGGAGCTGATGCGCTTCACCACGCCCGGCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530532.5
CDS-3UTR CAA 90 bp CCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACTGCCGCCGCTCAGTGTaGGTTATCAGTGTGATGAGC +
Preference number: 5 (lower is better)
Translates to: PACRRAHWGGRWVAPQVYCRRSV*VISVMS
Trigger: GCTCATCACACTGATAACCAACACTGAGCGGCGGCA...GTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGGGTGACCCAGATGGCCTaGCCGGCAGGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: QACTLGWTMGGPAGVHIWVTQMA*PAGKTW
Trigger: CCATGTCTTCCCTGCCGGCAAGGCCATCTGGGTCAC...CCAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCTCAAGAGCGTGGTGCCGGGAGTTGTACTaGAGTCCCGCGCCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: QTRLFSRVLRAWASSRAWCRELY*SPAPKS
Trigger: GGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCA...CCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp TGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCCCAAAGCTGCAGCTGTaGTCCTGGGTCCTCTGTACT +
Preference number: 5 (lower is better)
Translates to: CSGGAGAVSGPVSSLQACPKLQL*SWVLCT
Trigger: AGTACAGAGGACCCAGGACAACAGCTGCAGCTTTGG...GCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGACCCAGAAGAGGGGCTaGCAGAACTTGTTCTTGCAC +
Preference number: 5 (lower is better)
Translates to: QSPACRRAHWGGRWVAPQTQKRG*QNLFLH
Trigger: GTGCAAGAACAAGTTCTGCAAGCCCCTCTTCTGGGT...CTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CTTAGAGACAGGGGAGGCAGATATGCACAAACGCGCCTCGGCCCAGCTTGGGGCTGGGAGATGATGCGCTaGAGCCTGCGCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: LRDRGGRYAQTRLGPAWGWEMMR*SLRSCT
Trigger: GGTGCAGGAGCGCAGGCTCAAGCGCATCATCTCCCA...GCCCCAAGCTGGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTGTCTCTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp GCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGTCGCAGGTGGTCTGGTaGATGACGCGGATCTCACCC +
Preference number: 5 (lower is better)
Translates to: AGVHTGVDDGWPRRCTHLSQVVW*MTRISP
Trigger: GGGTGAGATCCGCGTCATCAACCAGACCACCTGCGA...CAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS TCA 90 bp CGCCCTCATCCGCATCCGTGCCCCCAACAACACGAGCCTGTCTCGTaGATGACCGCAGCCCACAGTCGCAGTCCTTCTCATCTGAGCCGT +
Preference number: 5 (lower is better)
Translates to: RPHPHPCPQQHEPVS*MTAAHSRSPSHLSR
Trigger: ACGGCTCAGATGAGAAGGACTGCGACTGTGGGCTGCGGTCATTCACGAGACAGGCTCGTGTTGTTGGGGGCACGGATGCGGATGAGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 90 bp GCTGAAGGCCGTCACAGCCGACTCCTTGTGGTAGGGGCCCAGGAATaGGACTCCGCTGTACAGCAGCTTCAGCGCGTCCTTCACCTTGCT +
Preference number: 5 (lower is better)
Translates to: AEGRHSRLLVVGAQE*DSAVQQLQRVLHLA
Trigger: AGCAAGGTGAAGGACGCGCTGAAGCTGCTGTACAGCGGAGTCCCATTCCTGGGCCCCTACCACAAGGAGTCGGCTGTGACGGCCTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 90 bp ATGCGCGGCGTGATCTGCTGCGGCAGGAGGTTCTCGCAGGTGGTCTaGTTGATGACGCGGATCTCACCCTTTTGCAGGATCAGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: MRGVICCGRRFSQVV*LMTRISPFCRISAP
Trigger: TGGCGCGCTGATCCTGCAAAAGGGTGAGATCCGCGTCATCAACCAGACCACCTGCGAGAACCTCCTGCCGCAGCAGATCACGCCGCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACAACCTTCTTGACGTTGTaGACTGGCAGGAACTCCACG +
Preference number: 5 (lower is better)
Translates to: QPAGVHTGVDDGWPRRCTTFLTL*TGRNST
Trigger: CGTGGAGTTCCTGCCAGTCAACAACGTCAAGAAGGT...TGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGTCCACCTTCTTGACGTaGTTGACTGGCAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: RWCSQRSSLQPAGVHTGVSTFLT*LTGRNS
Trigger: GGAGTTCCTGCCAGTCAACAACGTCAAGAAGGTGGA...CACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CTTAGAGACAGGGGAGGCAGATATGCACAAACGCGCCTCGGCCCAGCTTGGGGCGCGTCGCAACTGCAGTaGAGCTCATCGCTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: LRDRGGRYAQTRLGPAWGASQLQ*SSSLWS
Trigger: CGACCACAGCGATGAGCTCAACTGCAGTTGCGACGC...GCCCCAAGCTGGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTGTCTCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp AGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGGGTGGCTGCTTTTCCACCTTCTaGACGTTGTTGACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SGPVSSLQACTLGWTMGGCFSTF*TLLTGR
Trigger: CCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCA...GCCACCCATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CTTAGAGACAGGGGAGGCAGATATGCACAAACGCGCCTCGGCCCAGCTTGGGGCAGCGCGTCCTTCACCTaGCTGGCCAGGCTTACAAAC +
Preference number: 5 (lower is better)
Translates to: LRDRGGRYAQTRLGPAWGSASFT*LARLTN
Trigger: GTTTGTAAGCCTGGCCAGCAAGGTGAAGGACGCGCT...GCCCCAAGCTGGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTGTCTCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS TCA 90 bp GGCAGGTGCCCGCAGGCACGCCGGGCTCCAGCAGGTAGAAGAATTTaGAGCGCACCTTCACATGCTGGTTGTTGGGCACCTCAATGTTCC +
Preference number: 5 (lower is better)
Translates to: GRCPQARRAPAGRRI*SAPSHAGCWAPQCS
Trigger: GGAACATTGAGGTGCCCAACAACCAGCATGTGAAGGTGCGCTTCAAATTCTTCTACCTGCTGGAGCCCGGCGTGCCTGCGGGCACCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS GCA 90 bp AGGTTCTCGCAGGTGGTCTGGTTGATGACGCGGATCTCACCCTTTTaGAGGATCAGCGCGCCAGTGCCTCCATACTGGGTGTGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: RFSQVVWLMTRISPF*RISAPVPPYWVCPQ
Trigger: CTGGGGACACACCCAGTATGGAGGCACTGGCGCGCTGATCCTGCAAAAGGGTGAGATCCGCGTCATCAACCAGACCACCTGCGAGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp TGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCAGGGGCTTGCAGAACTaGTTCTTGCACGTGAACTGG +
Preference number: 5 (lower is better)
Translates to: CMFWGRWCSQRSSLQPAGRGLQN*FLHVNW
Trigger: CCAGTTCACGTGCAAGAACAAGTTCTGCAAGCCCCT...GCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp AGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGGCGGATCTCACCCTTTaGCAGGATCAGCGCGCCAGT +
Preference number: 5 (lower is better)
Translates to: SSQCMFWGRWCSQRSSLQADLTL*QDQRAS
Trigger: ACTGGCGCGCTGATCCTGCAAAAGGGTGAGATCCGC...CTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp GCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCGTGCACACTGGGGTGGACGATGACCCCAGTGTTCTCTTaGATCCAGTCCCGAAACAGA +
Preference number: 5 (lower is better)
Translates to: AVSGPVSSLQACTLGWTMTPVFS*IQSRNR
Trigger: TCTGTTTCGGGACTGGATCAAAGAGAACACTGGGGT...CATCGTCCACCCCAGTGTGCACGCCTGCAGGCTGGAGACTGGACCGCTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp TGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCCGCAGGTGTACACATTaGGGTGGCCCCGGCCCCTAT +
Preference number: 5 (lower is better)
Translates to: WRLSSQCMFWGRWCSQRSRRCTH*GGPGPY
Trigger: ATAGGGGCCGGGGCCACCCAAATGTGTACACCTGCG...GGACCGCTGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp TGTATGTTCTGGGGGCGCTGGTGCAGTCAGCGGTCCAGTCTCCAGCCTGCAGGCACCTTCACATGCTGGTaGTTGGGCACCTCAATGTTC +
Preference number: 5 (lower is better)
Translates to: CMFWGRWCSQRSSLQPAGTFTCW*LGTSMF
Trigger: GAACATTGAGGTGCCCAACAACCAGCATGTGAAGGT...GCCTGCAGGCTGGAGACTGGACCGCTGACTGCACCAGCGCCCCCAGAACATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS TCA 90 bp TGCAGTCAATGTTGGGTGGGTAGTGGCCTGGGTAGTAGGGGCTGTTaGATGTCCCCTGGGCTTTACGTAAGCGGCCTCCACAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CSQCWVGSGLGSRGC*MSPGLYVSGLHSCS
Trigger: TGAGCAGCTGTGGAGGCCGCTTACGTAAAGCCCAGGGGACATTCAACAGCCCCTACTACCCAGGCCACTACCCACCCAACATTGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS GCA 90 bp CTGCTCATCCTAGGCAGCTGGAAGAAGGTGGCCTCAAAGCCGGGATaGCGCCGCTCAGTGTTGGTTATCAGTGTGATGAGCAGGACGTTC +
Preference number: 5 (lower is better)
Translates to: LLILGSWKKVASKPG*RRSVLVISVMSRTF
Trigger: GAACGTCCTGCTCATCACACTGATAACCAACACTGAGCGGCGGCATCCCGGCTTTGAGGCCACCTTCTTCCAGCTGCCTAGGATGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS CCA 90 bp CCAGCGCCCCGGGCCATGCTTTTCCACCTTCTTGACGTTGTTGACTaGCAGGAACTCCACGCCTTCCTCCAAGCCATTCACTTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: PAPRAMLFHLLDVVD*QELHAFLQAIHFLV
Trigger: CACGAGAAAGTGAATGGCTTGGAGGAAGGCGTGGAGTTCCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CAGGCGTGCACACTGGGGTGGACGATGGGTGGCCCCGCAGGTGTACACATTTGGTTCACATGCTGGTTGTaGGGCACCTCAATGTTCCAT +
Preference number: 5 (lower is better)
Translates to: QACTLGWTMGGPAGVHIWFTCWL*GTSMFH
Trigger: ATGGAACATTGAGGTGCCCAACAACCAGCATGTGAA...CCAAATGTGTACACCTGCGGGGCCACCCATCGTCCACCCCAGTGTGCACGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCCACTCAGGGTTGCCCTaGCTCAAGCAGAGCCCATTG +
Preference number: 5 (lower is better)
Translates to: QFQSQTRLFSRVLRAWASHSGLP*LKQSPL
Trigger: CAATGGGCTCTGCTTGAGCAAGGGCAACCCTGAGTG...GGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp TGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGAGAGGTGAAACAGAGGGAGCCTaGTGTACACGCCTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: CPPLLPPSSTLEAEEARGETEGA*CTRLAC
Trigger: ACAAGCCAGGCGTGTACACAAGGCTCCCTCTGTTTC...ACCTCTCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CTTAGAGACAGGGGAGGCAGATATGCACAAACGCGCCTCGGCCCAGCTTGGGGCTGTGTCTTCAAACCTTaGCCCCCAGTTGGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: LRDRGGRYAQTRLGPAWGCVFKP*PPVGSV
Trigger: TACTGACCCAACTGGGGGCAAAGGTTTGAAGACACA...GCCCCAAGCTGGGCCGAGGCGCGTTTGTGCATATCTGCCTCCCCTGTCTCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 90 bp AATCAGCAAAGCACGATGCTAACGAGATGCAGGGTAGACAGAACATaGGGTGCAGGCCCCCGCCAGCCCTCCTCCCAACAATGTTCACTC +
Preference number: 5 (lower is better)
Translates to: NQQSTMLTRCRVDRT*GAGPRQPSSQQCSL
Trigger: GAGTGAACATTGTTGGGAGGAGGGCTGGCGGGGGCCTGCACCGCATGTTCTGTCTACCCTGCATCTCGTTAGCATCGTGCTTTGCTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524718.5
CDS-3UTR CAA 90 bp CAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCTCCGAGCCTGGGCTTCCCAGTCGTCCTTCCCATaGCACTGCTGGCTTTTCGAG +
Preference number: 5 (lower is better)
Translates to: QFQSQTRLFSRVLRAWASQSSFP*HCWLFE
Trigger: CTCGAAAAGCCAGCAGTGCAATGGGAAGGACGACTG...GGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp ACCAGTGTCCTCCCCTTCTACCTCCCAGCTCCACTTTGGAGGCTGAGGAAGCGATCGAAGGTGAAGTCATaGAAGAAGGGGTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: TSVLPFYLPAPLWRLRKRSKVKS*KKGWEM
Trigger: CATCTCCCACCCCTTCTTCAATGACTTCACCTTCGA...TCGCTTCCTCAGCCTCCAAAGTGGAGCTGGGAGGTAGAAGGGGAGGACACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp TTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGATGGGGCTCAGGGTGTaGTACACCGTCACCAGGTCG +
Preference number: 5 (lower is better)
Translates to: FLGRFGALEIEFTVYVLGMGLRV*YTVTRS
Trigger: CGACCTGGTGACGGTGTACAACACCCTGAGCCCCAT...CCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp GGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGCTGGTGCAGTCATTGGAGCCCTGGAGATaGAGTTCACAGTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: GALEIEFTVYVLGALVQSLEPWR*SSQCMF
Trigger: GAACATACACTGTGAACTCAATCTCCAGGGCTCCAA...TGACTGCACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp CTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGGGGCGAAGCGAACTGTGATCTaGTTGCTGTTGCTGGTGACG +
Preference number: 5 (lower is better)
Translates to: LGRFGALEIEFTVYVLGAKRTVI*LLLLVT
Trigger: CGTCACCAGCAACAGCAACAAGATCACAGTTCGCTT...CGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp GGTTTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGGTGATCTTGTTGCTGTaGCTGGTGACGACGAACTGG +
Preference number: 5 (lower is better)
Translates to: GFLGRFGALEIEFTVYVLVILLL*LVTTNW
Trigger: CCAGTTCGTCGTCACCAGCAACAGCAACAAGATCAC...CAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS-3UTR CAA 90 bp GGTTTTCTAGGCAGATTTGGAGCCCTGGAGATTGAGTTCACAGTGTATGTTCTGTTGCAGAACTTGTTCTaGCACGTGAACTGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: GFLGRFGALEIEFTVYVLLQNLF*HVNWWP
Trigger: CGGCCACCAGTTCACGTGCAAGAACAAGTTCTGCAA...CAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAAATCTGCCTAGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 90 bp AGCTGCAGCTGTTGTCCTGGGTCCTCTGTACTGTTTTGGAGTCCGTaGCTGAAGAATAAGAAGGAGAATAAAGCATTTCCTGATACAATC +
Preference number: 5 (lower is better)
Translates to: SCSCCPGSSVLFWSP*LKNKKENKAFPDTI
Trigger: GATTGTATCAGGAAATGCTTTATTCTCCTTCTTATTCTTCAGCCACGGACTCCAAAACAGTACAGAGGACCCAGGACAACAGCTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524718.5
CDS TCA 90 bp GCAGCTGTTGTCCTGGGTCCTCTGTACTGTTTTGGAGTCCGTGGCTaGAGAATAAGAAGGAGAATAAAGCATTTCCTGATACAATCCATT +
Preference number: 5 (lower is better)
Translates to: AAVVLGPLYCFGVRG*RIRRRIKHFLIQSI
Trigger: AATGGATTGTATCAGGAAATGCTTTATTCTCCTTCTTATTCTTCAGCCACGGACTCCAAAACAGTACAGAGGACCCAGGACAACAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524718.5
CDS CCA 72 bp CTGCGCTCCTGCACCCCAGGGGCGCTGCGCTGGCTCTaGTCGTGCAAGCCCAGGAAGGCCGTCCACTGCGTG +
Preference number: 6 (lower is better)
Translates to: LRSCTPGALRWL*SCKPRKAVHCV
Trigger: CACGCAGTGGACGGCCTTCCTGGGCTTGCACGACCAGAGCCAGCGCAGCGCCCCTGGGGTGCAGGAGCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp TTGAGCCTGCGCTCCTGCACCCCAGGGGCGCTGCGCTaGCTCTGGTCGTGCAAGCCCAGGAAGGCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: LSLRSCTPGALR*LWSCKPRKAVH
Trigger: GTGGACGGCCTTCCTGGGCTTGCACGACCAGAGCCAGCGCAGCGCCCCTGGGGTGCAGGAGCGCAGGCTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp TTCCCCCACGTGCGCCCAGAGCGACTCCAGGACACATaGGCGGCTCGGGGCACACCTGGGCCTGCCATCTGC +
Preference number: 6 (lower is better)
Translates to: FPHVRPERLQDT*AARGTPGPAIC
Trigger: GCAGATGGCAGGCCCAGGTGTGCCCCGAGCCGCCCATGTGTCCTGGAGTCGCTCTGGGCGCACGTGGGGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530532.5
CDS CAA 72 bp TGCACCAGGGCGTGGGGCTCCATGGGGCTCAGGGTGTaGTACACCGTCACCAGGTCGCTGCCGCGCTCGTCG +
Preference number: 6 (lower is better)
Translates to: CTRAWGSMGLRV*YTVTRSLPRSS
Trigger: CGACGAGCGCGGCAGCGACCTGGTGACGGTGTACAACACCCTGAGCCCCATGGAGCCCCACGCCCTGGTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS CAA 90 bp CCACACAACTGCACCAGGGCGTGGGGCTCCATGGGGCTCAGGGTGTaGTACACCGTCACCAGGTCGCTGCCGCGCTCGTCGCAGGACGCA +
Preference number: 6 (lower is better)
Translates to: PHNCTRAWGSMGLRV*YTVTRSLPRSSQDA
Trigger: TGCGTCCTGCGACGAGCGCGGCAGCGACCTGGTGACGGTGTACAACACCCTGAGCCCCATGGAGCCCCACGCCCTGGTGCAGTTGTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS TCA 72 bp GCAGCTCCTTCCGGATACACCGCCCCGTGCGGCACGTaGACTGCCCCGGGCATGGGTCACTGGAGTCGTAGG +
Preference number: 6 (lower is better)
Translates to: AAPSGYTAPCGT*TAPGMGHWSRR
Trigger: CCTACGACTCCAGTGACCCATGCCCGGGGCAGTTCACGTGCCGCACGGGGCGGTGTATCCGGAAGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 72 bp CCAGGACACATGGGCGGCTCGGGGCACACCTGGGCCTaGCATCTGCAGAGGCCCTTCCCCAGCTCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: PGHMGGSGHTWA*HLQRPFPSSSC
Trigger: ACAAGAGGAGCTGGGGAAGGGCCTCTGCAGATGGCAGGCCCAGGTGTGCCCCGAGCCGCCCATGTGTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530532.5
CDS GCA 72 bp GGCGTGGTGAAGCGCATCAGCTCCACACCGCGGGCGTaGAGGCCAAAGCTGCAGCTGTTGTCCTGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: GVVKRISSTPRA*RPKLQLLSWVL
Trigger: GAGGACCCAGGACAACAGCTGCAGCTTTGGCCTGCACGCCCGCGGTGTGGAGCTGATGCGCTTCACCACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530532.5
CDS GCA 72 bp ACATGGGCGGCTCGGGGCACACCTGGGCCTGCCATCTaGAGAGGCCCTTCCCCAGCTCCTCTTGTGTCATCC +
Preference number: 6 (lower is better)
Translates to: TWAARGTPGPAI*RGPSPAPLVSS
Trigger: GGATGACACAAGAGGAGCTGGGGAAGGGCCTCTGCAGATGGCAGGCCCAGGTGTGCCCCGAGCCGCCCATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530532.5
CDS GCA 72 bp GGCGTGGTGAAGCGCATCAGCTCCACACCGCGGGCGTaGAGGCCAAAGCTGCAGCTGTCTGCGCAGGAGACA +
Preference number: 6 (lower is better)
Translates to: GVVKRISSTPRA*RPKLQLSAQET
Trigger: TGTCTCCTGCGCAGACAGCTGCAGCTTTGGCCTGCACGCCCGCGGTGTGGAGCTGATGCGCTTCACCACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530376.1
CDS GCA 72 bp TGGGGCTCAGGGTGTTGTACACCGTCACCAGGTCGCTaGCGCGCTCGTCGCAGGACGCAAGGTCAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: WGSGCCTPSPGR*RARRRTQGQSC
Trigger: GCAGCTTTGACCTTGCGTCCTGCGACGAGCGCGGCAGCGACCTGGTGACGGTGTACAACACCCTGAGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS CCA 72 bp AGGTGCCACACAACTGCACCAGGGCGTGGGGCTCCATaGGGCTCAGGGTGTTGTACACCGTCACCAGGTCGC +
Preference number: 6 (lower is better)
Translates to: RCHTTAPGRGAP*GSGCCTPSPGR
Trigger: GCGACCTGGTGACGGTGTACAACACCCTGAGCCCCATGGAGCCCCACGCCCTGGTGCAGTTGTGTGGCACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS CCA 72 bp CGGCAGGGAAGACATGGGAGGCGTCCGGCAGGCAGATaGGCCGCACCATGGAGCTGTACTCTGCCGGTTTCT +
Preference number: 6 (lower is better)
Translates to: RQGRHGRRPAGR*AAPWSCTLPVS
Trigger: AGAAACCGGCAGAGTACAGCTCCATGGTGCGGCCCATCTGCCTGCCGGACGCCTCCCATGTCTTCCCTGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS TCA 72 bp CCAAGCCATTCACTTTCTCGTGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCTTCGGGCCCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: PSHSLSRAGSCT*VPRRSPSGPLR
Trigger: GCGGAGGGGGCCCGAAGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCACGAGAAAGTGAATGGCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS TCA 72 bp CTGTTTTGGAGTCCGTGGGGAAAGCCACCACTGAGGTaGCCACAAAGGACTTCAGGGAGCGCGCCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: LFWSPWGKPPLR*PQRTSGSAPAG
Trigger: CCCCGCGGGCGCGCTCCCTGAAGTCCTTTGTGGTCACCTCAGTGGTGGCTTTCCCCACGGACTCCAAAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278742.6
ENST00000530532.5
CDS GCA 72 bp AGCACGGCTGCCAGCACCACCCAGCGCCCCGGGCCATaGTTTTCCACCTTCTTGACGTTGTTGACTGGCAGG +
Preference number: 6 (lower is better)
Translates to: STAASTTQRPGP*FSTFLTLLTGR
Trigger: CCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCGCTGGGTGGTGCTGGCAGCCGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 72 bp CTGAGGAAGCCCACGCACATCATGCGCGGCGTGATCTaGTGCGGCAGGAGGTTCTCGCAGGTGGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LRKPTHIMRGVI*CGRRFSQVVWL
Trigger: CAACCAGACCACCTGCGAGAACCTCCTGCCGCAGCAGATCACGCCGCGCATGATGTGCGTGGGCTTCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp CGCGGCGTGATCTGCTGCGGCAGGAGGTTCTCGCAGGTGGTCTGGTaGATGACGCGGATCTCACCCTTTTGCAGGATCAGCGCGCCAGTG +
Preference number: 6 (lower is better)
Translates to: RGVICCGRRFSQVVW*MTRISPFCRISAPV
Trigger: CACTGGCGCGCTGATCCTGCAAAAGGGTGAGATCCGCGTCATCAACCAGACCACCTGCGAGAACCTCCTGCCGCAGCAGATCACGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp GCTGCCAGCACCACCCAGCGCCCCGGGCCATGCTTTTCCACCTTCTaGACGTTGTTGACTGGCAGGAACTCCACGCCTTCCTCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: AASTTQRPGPCFSTF*TLLTGRNSTPSSKP
Trigger: TGGCTTGGAGGAAGGCGTGGAGTTCCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCGCTGGGTGGTGCTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 72 bp AGGAAGCCCACGCACATCATGCGCGGCGTGATCTGCTaGGGCAGGAGGTTCTCGCAGGTGGTCTGGTTGATG +
Preference number: 6 (lower is better)
Translates to: RKPTHIMRGVIC*GRRFSQVVWLM
Trigger: CATCAACCAGACCACCTGCGAGAACCTCCTGCCGCAGCAGATCACGCCGCGCATGATGTGCGTGGGCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp CGTCACAGCCGACTCCTTGTGGTAGGGGCCCAGGAATaGGACTCCGCTGTACAGCAGCTTCAGCGCGTCCTT +
Preference number: 6 (lower is better)
Translates to: RHSRLLVVGAQE*DSAVQQLQRVL
Trigger: AAGGACGCGCTGAAGCTGCTGTACAGCGGAGTCCCATTCCTGGGCCCCTACCACAAGGAGTCGGCTGTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp TCCAAGCCATTCACTTTCTCGTGCCGGGAGTTGTACTaGAGTCCCGCGCCGAAGTCCTTCGGGCCCCCTCCG +
Preference number: 6 (lower is better)
Translates to: SKPFTFSCRELY*SPAPKSFGPPP
Trigger: CGGAGGGGGCCCGAAGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCACGAGAAAGTGAATGGCTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp CCGTCGCTACAGTCCTCCTTCCCGTCACACTCAGGGTaGCCCTTGCTCAAGCAGAGCCCATTGAGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: PSLQSSFPSHSG*PLLKQSPLRQR
Trigger: CCGCTGCCTCAATGGGCTCTGCTTGAGCAAGGGCAACCCTGAGTGTGACGGGAAGGAGGACTGTAGCGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp GCACACCTGGGCCTGCCATCTGCAGAGGCCCTTCCCCAGCTCCTCTaGTGTCATCCCTCTTTCCACCCCAAAGCAAGAGGCCTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: AHLGLPSAEALPQLL*CHPSFHPKARGLAL
Trigger: AAGGGCAAGGCCTCTTGCTTTGGGGTGGAAAGAGGGATGACACAAGAGGAGCTGGGGAAGGGCCTCTGCAGATGGCAGGCCCAGGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530532.5
CDS TCA 72 bp CCGCATCCGTGCCCCCAACAACACGAGCCTGTCTCGTaGATGACCGCAGCCCACAGTCGCAGTCCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: PHPCPQQHEPVS*MTAAHSRSPSH
Trigger: ATGAGAAGGACTGCGACTGTGGGCTGCGGTCATTCACGAGACAGGCTCGTGTTGTTGGGGGCACGGATGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp ACCACCCAGCGCCCCGGGCCATGCTTTTCCACCTTCTaGACGTTGTTGACTGGCAGGAACTCCACGCCTTCC +
Preference number: 6 (lower is better)
Translates to: TTQRPGPCFSTF*TLLTGRNSTPS
Trigger: GGAAGGCGTGGAGTTCCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCGCTGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp GAGGTTCTCGCAGGTGGTCTGGTTGATGACGCGGATCTCACCCTTTaGCAGGATCAGCGCGCCAGTGCCTCCATACTGGGTGTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: EVLAGGLVDDADLTL*QDQRASASILGVSP
Trigger: TGGGGACACACCCAGTATGGAGGCACTGGCGCGCTGATCCTGCAAAAGGGTGAGATCCGCGTCATCAACCAGACCACCTGCGAGAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS TCA 72 bp TGTTGGGTGGGTAGTGGCCTGGGTAGTAGGGGCTGTTaGATGTCCCCTGGGCTTTACGTAAGCGGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: CWVGSGLGSRGC*MSPGLYVSGLH
Trigger: GTGGAGGCCGCTTACGTAAAGCCCAGGGGACATTCAACAGCCCCTACTACCCAGGCCACTACCCACCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS TCA 72 bp CCGCAGGCACGCCGGGCTCCAGCAGGTAGAAGAATTTaGAGCGCACCTTCACATGCTGGTTGTTGGGCACCT +
Preference number: 6 (lower is better)
Translates to: PQARRAPAGRRI*SAPSHAGCWAP
Trigger: AGGTGCCCAACAACCAGCATGTGAAGGTGCGCTTCAAATTCTTCTACCTGCTGGAGCCCGGCGTGCCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS TCA 72 bp GCTGGCTTTTCGAGAGGCACTTCCCATTGGAACACCTaGAGGTCTGGGCCGGACAACTGCACCCCTGCTCGT +
Preference number: 6 (lower is better)
Translates to: AGFSRGTSHWNT*RSGPDNCTPAR
Trigger: ACGAGCAGGGGTGCAGTTGTCCGGCCCAGACCTTCAGGTGTTCCAATGGGAAGTGCCTCTCGAAAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 72 bp CAGGTGGTCTGGTTGATGACGCGGATCTCACCCTTTTaGAGGATCAGCGCGCCAGTGCCTCCATACTGGGTG +
Preference number: 6 (lower is better)
Translates to: QVVWLMTRISPF*RISAPVPPYWV
Trigger: CACCCAGTATGGAGGCACTGGCGCGCTGATCCTGCAAAAGGGTGAGATCCGCGTCATCAACCAGACCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 72 bp GATGCTAACGAGATGCAGGGTAGACAGAACATGCGGTaGAGGCCCCCGCCAGCCCTCCTCCCAACAATGTTC +
Preference number: 6 (lower is better)
Translates to: DANEMQGRQNMR*RPPPALLPTMF
Trigger: GAACATTGTTGGGAGGAGGGCTGGCGGGGGCCTGCACCGCATGTTCTGTCTACCCTGCATCTCGTTAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524718.5
CDS CAA 72 bp CGCCCCGGGCCATGCTTTTCCACCTTCTTGACGTTGTaGACTGGCAGGAACTCCACGCCTTCCTCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: RPGPCFSTFLTL*TGRNSTPSSKP
Trigger: TGGCTTGGAGGAAGGCGTGGAGTTCCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp CAGCGCCCCGGGCCATGCTTTTCCACCTTCTTGACGTaGTTGACTGGCAGGAACTCCACGCCTTCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: QRPGPCFSTFLT*LTGRNSTPSSK
Trigger: CTTGGAGGAAGGCGTGGAGTTCCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp TCGCAGACCCAGAAGAGGGGCTTGCAGAACTTGTTCTaGCACGTGAACTGGTGGCCGGCGTCGCAACTGCAG +
Preference number: 6 (lower is better)
Translates to: SQTQKRGLQNLF*HVNWWPASQLQ
Trigger: CTGCAGTTGCGACGCCGGCCACCAGTTCACGTGCAAGAACAAGTTCTGCAAGCCCCTCTTCTGGGTCTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp GCAGGTGGTCTGGTTGATGACGCGGATCTCACCCTTTaGCAGGATCAGCGCGCCAGTGCCTCCATACTGGGT +
Preference number: 6 (lower is better)
Translates to: AGGLVDDADLTL*QDQRASASILG
Trigger: ACCCAGTATGGAGGCACTGGCGCGCTGATCCTGCAAAAGGGTGAGATCCGCGTCATCAACCAGACCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp AGCACCACCCAGCGCCCCGGGCCATGCTTTTCCACCTTCTTGACGTaGTTGACTGGCAGGAACTCCACGCCTTCCTCCAAGCCATTCACT +
Preference number: 6 (lower is better)
Translates to: STTQRPGPCFSTFLT*LTGRNSTPSSKPFT
Trigger: AGTGAATGGCTTGGAGGAAGGCGTGGAGTTCCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCGCTGGGTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp TCGTCCTTCCCATTGCACTGCTGGCTTTTCGAGAGGCACTTCCCATaGGAACACCTGAAGGTCTGGGCCGGACAACTGCACCCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: SSFPLHCWLFERHFP*EHLKVWAGQLHPCS
Trigger: CGAGCAGGGGTGCAGTTGTCCGGCCCAGACCTTCAGGTGTTCCAATGGGAAGTGCCTCTCGAAAAGCCAGCAGTGCAATGGGAAGGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp ACCACCCAGCGCCCCGGGCCATGCTTTTCCACCTTCTTGACGTTGTaGACTGGCAGGAACTCCACGCCTTCCTCCAAGCCATTCACTTTC +
Preference number: 6 (lower is better)
Translates to: TTQRPGPCFSTFLTL*TGRNSTPSSKPFTF
Trigger: GAAAGTGAATGGCTTGGAGGAAGGCGTGGAGTTCCTGCCAGTCAACAACGTCAAGAAGGTGGAAAAGCATGGCCCGGGGCGCTGGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp CAGTCGTTCACACTGTCGCAGACCCAGAAGAGGGGCTTGCAGAACTaGTTCTTGCACGTGAACTGGTGGCCGGCGTCGCAACTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: QSFTLSQTQKRGLQN*FLHVNWWPASQLQL
Trigger: CAACTGCAGTTGCGACGCCGGCCACCAGTTCACGTGCAAGAACAAGTTCTGCAAGCCCCTCTTCTGGGTCTGCGACAGTGTGAACGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS GCA 72 bp CTAGGCAGCTGGAAGAAGGTGGCCTCAAAGCCGGGATaGCGCCGCTCAGTGTTGGTTATCAGTGTGATGAGC +
Preference number: 6 (lower is better)
Translates to: LGSWKKVASKPG*RRSVLVISVMS
Trigger: GCTCATCACACTGATAACCAACACTGAGCGGCGGCATCCCGGCTTTGAGGCCACCTTCTTCCAGCTGCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS GCA 72 bp TCGGACCCGTCCCCACAGTCGTCCTTCCCATTGCACTaGTGGCTTTTCGAGAGGCACTTCCCATTGGAACAC +
Preference number: 6 (lower is better)
Translates to: SDPSPQSSFPLH*WLFERHFPLEH
Trigger: GTGTTCCAATGGGAAGTGCCTCTCGAAAAGCCAGCAGTGCAATGGGAAGGACGACTGTGGGGACGGGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp AGGGGCTTGCAGAACTTGTTCTTGCACGTGAACTGGTaGCCGGCGTCGCAACTGCAGTTGAGCTCATCGCTG +
Preference number: 6 (lower is better)
Translates to: RGLQNLFLHVNW*PASQLQLSSSL
Trigger: CAGCGATGAGCTCAACTGCAGTTGCGACGCCGGCCACCAGTTCACGTGCAAGAACAAGTTCTGCAAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp GACCCGTCCCCACAGTCGTCCTTCCCATTGCACTGCTaGCTTTTCGAGAGGCACTTCCCATTGGAACACCTG +
Preference number: 6 (lower is better)
Translates to: DPSPQSSFPLHC*LFERHFPLEHL
Trigger: CAGGTGTTCCAATGGGAAGTGCCTCTCGAAAAGCCAGCAGTGCAATGGGAAGGACGACTGTGGGGACGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp GTGATCTGCTGCGGCAGGAGGTTCTCGCAGGTGGTCTaGTTGATGACGCGGATCTCACCCTTTTGCAGGATC +
Preference number: 6 (lower is better)
Translates to: VICCGRRFSQVV*LMTRISPFCRI
Trigger: GATCCTGCAAAAGGGTGAGATCCGCGTCATCAACCAGACCACCTGCGAGAACCTCCTGCCGCAGCAGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp AAGGTGGCCTCAAAGCCGGGATGCCGCCGCTCAGTGTaGGTTATCAGTGTGATGAGCAGGACGTTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: KVASKPGCRRSV*VISVMSRTFWE
Trigger: CTCCCAGAACGTCCTGCTCATCACACTGATAACCAACACTGAGCGGCGGCATCCCGGCTTTGAGGCCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS CAA 72 bp ACACTGTCGCAGACCCAGAAGAGGGGCTTGCAGAACTaGTTCTTGCACGTGAACTGGTGGCCGGCGTCGCAA +
Preference number: 6 (lower is better)
Translates to: TLSQTQKRGLQN*FLHVNWWPASQ
Trigger: TTGCGACGCCGGCCACCAGTTCACGTGCAAGAACAAGTTCTGCAAGCCCCTCTTCTGGGTCTGCGACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp ATCTGCTGCGGCAGGAGGTTCTCGCAGGTGGTCTGGTaGATGACGCGGATCTCACCCTTTTGCAGGATCAGC +
Preference number: 6 (lower is better)
Translates to: ICCGRRFSQVVW*MTRISPFCRIS
Trigger: GCTGATCCTGCAAAAGGGTGAGATCCGCGTCATCAACCAGACCACCTGCGAGAACCTCCTGCCGCAGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 90 bp TTCACACTGTCGCAGACCCAGAAGAGGGGCTTGCAGAACTTGTTCTaGCACGTGAACTGGTGGCCGGCGTCGCAACTGCAGTTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: FTLSQTQKRGLQNLF*HVNWWPASQLQLSS
Trigger: TGAGCTCAACTGCAGTTGCGACGCCGGCCACCAGTTCACGTGCAAGAACAAGTTCTGCAAGCCCCTCTTCTGGGTCTGCGACAGTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp AAGAGGGGCTTGCAGAACTTGTTCTTGCACGTGAACTaGTGGCCGGCGTCGCAACTGCAGTTGAGCTCATCG +
Preference number: 6 (lower is better)
Translates to: KRGLQNLFLHVN*WPASQLQLSSS
Trigger: CGATGAGCTCAACTGCAGTTGCGACGCCGGCCACCAGTTCACGTGCAAGAACAAGTTCTGCAAGCCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp ACTCCGCTGTACAGCAGCTTCAGCGCGTCCTTCACCTaGCTGGCCAGGCTTACAAACTCAGTGGAGTTGGAG +
Preference number: 6 (lower is better)
Translates to: TPLYSSFSASFT*LARLTNSVELE
Trigger: CTCCAACTCCACTGAGTTTGTAAGCCTGGCCAGCAAGGTGAAGGACGCGCTGAAGCTGCTGTACAGCGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CAA 72 bp CAGTCGTTCACACTGTCGCAGACCCAGAAGAGGGGCTaGCAGAACTTGTTCTTGCACGTGAACTGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: QSFTLSQTQKRG*QNLFLHVNWWP
Trigger: CGGCCACCAGTTCACGTGCAAGAACAAGTTCTGCAAGCCCCTCTTCTGGGTCTGCGACAGTGTGAACGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp CGCTGTACAGCAGCTTCAGCGCGTCCTTCACCTTGCTaGCCAGGCTTACAAACTCAGTGGAGTTGGAGTTCT +
Preference number: 6 (lower is better)
Translates to: RCTAASARPSPC*PGLQTQWSWSS
Trigger: AGAACTCCAACTCCACTGAGTTTGTAAGCCTGGCCAGCAAGGTGAAGGACGCGCTGAAGCTGCTGTACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp GTTCCATGTGCAGTCAATGTTGGGTGGGTAGTGGCCTaGGTAGTAGGGGCTGTTGAATGTCCCCTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: VPCAVNVGWVVA*VVGAVECPLGF
Trigger: AAAGCCCAGGGGACATTCAACAGCCCCTACTACCCAGGCCACTACCCACCCAACATTGACTGCACATGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278742.6
ENST00000524718.5
ENST00000530376.1
ENST00000530532.5
CDS CCA 72 bp CCAGCCCTCCTCCCAACAATGTTCACTCACGGTCACTaGAGTCGTAGGAGAGGTATTCAGCTAAGAAGCCGG +
Preference number: 6 (lower is better)
Translates to: PALLPTMFTHGH*SRRRGIQLRSR
Trigger: CCGGCTTCTTAGCTGAATACCTCTCCTACGACTCCAGTGACCGTGAGTGAACATTGTTGGGAGGAGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524718.5
CDS CCA 72 bp ACTGTGATCTTGTTGCTGTTGCTGGTGACGACGAACTaGGACCTCTCTCCGCAGTATTTCTCCCCGTTGATC +
Preference number: 6 (lower is better)
Translates to: TVILLLLLVTTN*DLSPQYFSPLI
Trigger: GATCAACGGGGAGAAATACTGCGGAGAGAGGTCCCAGTTCGTCGTCACCAGCAACAGCAACAAGATCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278742.6
ENST00000524718.5
CDS CCA 72 bp CGTCCTTCACCTTGCTGGCCAGGCTTACAAACTCAGTaGAGTTGGAGTTCTCGTAGGCATCCACAAAATTCT +
Preference number: 6 (lower is better)
Translates to: RPSPCWPGLQTQ*SWSSRRHPQNS
Trigger: AGAATTTTGTGGATGCCTACGAGAACTCCAACTCCACTGAGTTTGTAAGCCTGGCCAGCAAGGTGAAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6
CDS CCA 72 bp TCACCTTGCTGGCCAGGCTTACAAACTCAGTGGAGTTaGAGTTCTCGTAGGCATCCACAAAATTCTCATTTG +
Preference number: 6 (lower is better)
Translates to: SPCWPGLQTQWS*SSRRHPQNSHL
Trigger: CAAATGAGAATTTTGTGGATGCCTACGAGAACTCCAACTCCACTGAGTTTGTAAGCCTGGCCAGCAAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278742.6