Pregenerated sensors for ST13 (Homo sapiens)
Ensembl gene IDs: ENSG00000100380Ensembl transcript IDs: ENST00000413424.5
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATGAGCCACCGCGCCTGGCCGGAAAGCCTGAAACTTCTTAACTTCCACAAGGTCATGAGCCACCGCGCCTaGCCGGAAAGCCTGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: MSHRAWPESLKLLNFHKVMSHRA*PESLKL Trigger: AAGTTTCAGGCTTTCCGGCCAGGCGCGGTGGCTCAT...GACCTTGTGGAAGTTAAGAAGTTTCAGGCTTTCCGGCCAGGCGCGGTGGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413424.5 |
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| CDS-3UTR TCA 90 bp | ATGAGCCACCGCGCCTGGCCGGAAAGCCTGAAACTTCTTAACTTCCACAAGGTCCCTGGCCGGAAAGCCTaGAACTTCTTAACTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MSHRAWPESLKLLNFHKVPGRKA*NFLTST Trigger: TGTGGAAGTTAAGAAGTTTCAGGCTTTCCGGCCAGG...GACCTTGTGGAAGTTAAGAAGTTTCAGGCTTTCCGGCCAGGCGCGGTGGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413424.5 |
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| CDS-3UTR GCA 90 bp | ATGAGCCACCGCGCCTGGCCGGAAAGCCTGAAACTTCTTAACTTCCACAAGGTCTTCTGCAATTTTCTGTaGCTCATGATCCACCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSHRAWPESLKLLNFHKVFCNFL*LMIHLP Trigger: AGGCAGGTGGATCATGAGGCACAGAAAATTGCAGAA...GACCTTGTGGAAGTTAAGAAGTTTCAGGCTTTCCGGCCAGGCGCGGTGGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413424.5 |
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| CDS-3UTR GCA 90 bp | ATGAGCCACCGCGCCTGGCCGGAAAGCCTGAAACTTCTTAACTTCCACAAGGTCTCCACAAGGTCTTCTTaGTTTATAAAGTGGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MSHRAWPESLKLLNFHKVSTRSS*FIKWLY Trigger: GTACAACCACTTTATAAAGCAAGAAGACCTTGTGGA...GACCTTGTGGAAGTTAAGAAGTTTCAGGCTTTCCGGCCAGGCGCGGTGGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413424.5 |
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| CDS-3UTR CAA 90 bp | ATGAGCCACCGCGCCTGGCCGGAAAGCCTGAAACTTCTTAACTTCCACAAGGTCTTCCACAAGGTCTTCTaGCTTTATAAAGTGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: MSHRAWPESLKLLNFHKVFHKVF*LYKVVV Trigger: TACAACCACTTTATAAAGCAAGAAGACCTTGTGGAA...GACCTTGTGGAAGTTAAGAAGTTTCAGGCTTTCCGGCCAGGCGCGGTGGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413424.5 |
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