Pregenerated sensors for SSX4B (Homo sapiens)
Ensembl gene IDs: ENSG00000269791Ensembl transcript IDs: ENST00000619890.1
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS-3UTR CAA 90 bp | CTTATACTGGTACTTGGTGTGTGTGTGTGCGTGTGTGGTGTGTGTGTAAATGCAGCATGTTTCCCCCTTTaGGGTCCTTCGGGAAGATTC | + |
Preference number: 5 (lower is better) Translates to: LILVLGVCVCVCGVCVNAACFPL*GPSGRF Trigger: GAATCTTCCCGAAGGACCCAAAAGGGGGAAACATGC...TGCATTTACACACACACCACACACGCACACACACACACCAAGTACCAGTATAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619890.1 |
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CDS-3UTR CAA 90 bp | CTTATACTGGTACTTGGTGTGTGTGTGTGCGTGTGTGGTGTGTGTGTAAATGCATGCTTATACTGGTACTaGGTGTGTGTGTGTGCGTGT | + |
Preference number: 5 (lower is better) Translates to: LILVLGVCVCVCGVCVNACLYWY*VCVCAC Trigger: ACACGCACACACACACACCAAGTACCAGTATAAGCA...TGCATTTACACACACACCACACACGCACACACACACACCAAGTACCAGTATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619890.1 |