RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SSUH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000125046

Ensembl transcript IDs: ENST00000317371.8, ENST00000341795.7, ENST00000413305.5, ENST00000415132.5, ENST00000420394.5, ENST00000435138.5, ENST00000455157.6, ENST00000464494.1, ENST00000470009.1, ENST00000478513.1, ENST00000483845.1, ENST00000492435.1, ENST00000495366.5

Found 944 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGGATGGGCACCGCACCGTGCCCGCCC +
Preference number: 1 (lower is better)
Translates to: CRTPRTADISGTAWL*AWLRSRMGTAPCPP
Trigger: GGGCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CCA 90 bp ACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGCACCGCACCGTGCCCGCCCCGTGGC +
Preference number: 1 (lower is better)
Translates to: TPRTADISGTAWLCA*LRSRMGTAPCPPRG
Trigger: GCCACGGGGCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CCA 90 bp TGCAGGGGACCGAACAGAGAGGCGGGGGCTTCTGGGAAGGGCCTGTaGACTCACGCGGGCCAGCCAGCCTCCTCAACGTGCAGGCGAGAA +
Preference number: 1 (lower is better)
Translates to: CRGPNREAGASGKGL*THAGQPASSTCRRE
Trigger: TTCTCGCCTGCACGTTGAGGAGGCTGGCTGGCCCGCGTGAGTCCACAGGCCCTTCCCAGAAGCCCCCGCCTCTCTGTTCGGTCCCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR GCA 90 bp GCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCA +
Preference number: 1 (lower is better)
Translates to: AGRGHGRPRQRCALQ*PSGRQERCLAEGSP
Trigger: TGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 90 bp CTGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAA +
Preference number: 1 (lower is better)
Translates to: LLQDAGTGGQGSAVL*NAPLGGKRDVSQRE
Trigger: TTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CCA 90 bp CGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGG +
Preference number: 1 (lower is better)
Translates to: RAREAKAALCSAMPL*EAREMSRRGKSTMG
Trigger: CCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 90 bp GGGAAGGGCCTGTGGACTCACGCGGGCCAGCCAGCCTCCTCAACGTaGAGGCGAGAAACTGAGGCCACGGTAGTGGTAAAGCCCTCAGCA +
Preference number: 1 (lower is better)
Translates to: GKGLWTHAGQPASST*RRETEATVVVKPSA
Trigger: TGCTGAGGGCTTTACCACTACCGTGGCCTCAGTTTCTCGCCTGCACGTTGAGGAGGCTGGCTGGCCCGCGTGAGTCCACAGGCCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR TCA 90 bp GACTCACGCGGGCCAGCCAGCCTCCTCAACGTGCAGGCGAGAAACTaGGGCCACGGTAGTGGTAAAGCCCTCAGCAGTCCAACTGGGGAG +
Preference number: 1 (lower is better)
Translates to: DSRGPASLLNVQARN*GHGSGKALSSPTGE
Trigger: CTCCCCAGTTGGACTGCTGAGGGCTTTACCACTACCGTGGCCTCAGTTTCTCGCCTGCACGTTGAGGAGGCTGGCTGGCCCGCGTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR GCA 90 bp GTCATCGCAGGGACTCTGTGTTCCAGGAACGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGGGCCTCCAAAGGTGGGAAGAATATC +
Preference number: 1 (lower is better)
Translates to: VIAGTLCSRNEGQDL*SWGLPGASKGGKNI
Trigger: GATATTCTTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCGTTCCTGGAACACAGAGTCCCTGCGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 90 bp CCGGGGGCTGCCCGTGCTTCTGTGTGTCTGCTCACATCAGTCCCCTaGCCCAAACCCTCAATGGGCATGGGATCCAGTATTCATCCATCT +
Preference number: 1 (lower is better)
Translates to: PGAARASVCLLTSVP*PKPSMGMGSSIHPS
Trigger: AGATGGATGAATACTGGATCCCATGCCCATTGAGGGTTTGGGTCAGGGGACTGATGTGAGCAGACACACAGAAGCACGGGCAGCCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 90 bp AACCACAGAGCACCTACTACGTGCAGAGCTCTGGGGACACAGCAGTaGCGAGACAGATGGGTTCCTGTTTGCCTTCCAGATGGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: NHRAPTTCRALGTQQ*RDRWVPVCLPDGQA
Trigger: TGCCTGCCCATCTGGAAGGCAAACAGGAACCCATCTGTCTCGTCACTGCTGTGTCCCCAGAGCTCTGCACGTAGTAGGTGCTCTGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR CCA 90 bp ATAACGGAGCCTCTCAGAGCTACCGCAGGTGCCAAGCAGTGGCTGTaGAAAGTGACGACGGGGCTGGATTGTTCTGAGGATACACCTGGA +
Preference number: 1 (lower is better)
Translates to: ITEPLRATAGAKQWL*KVTTGLDCSEDTPG
Trigger: TCCAGGTGTATCCTCAGAACAATCCAGCCCCGTCGTCACTTTCCACAGCCACTGCTTGGCACCTGCGGTAGCTCTGAGAGGCTCCGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR CCA 90 bp ACACGCATAACGGAGCCTCTCAGAGCTACCGCAGGTGCCAAGCAGTaGCTGTGGAAAGTGACGACGGGGCTGGATTGTTCTGAGGATACA +
Preference number: 1 (lower is better)
Translates to: TRITEPLRATAGAKQ*LWKVTTGLDCSEDT
Trigger: TGTATCCTCAGAACAATCCAGCCCCGTCGTCACTTTCCACAGCCACTGCTTGGCACCTGCGGTAGCTCTGAGAGGCTCCGTTATGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR CCA 90 bp CCCAAGTCCATATCATGTCTTTCCAGCTGGGTTGGAAGAATCTGCTaGAGGCCGGGGGCTGCCCGTGCTTCTGTGTGTCTGCTCACATCA +
Preference number: 1 (lower is better)
Translates to: PKSISCLSSWVGRIC*RPGAARASVCLLTS
Trigger: TGATGTGAGCAGACACACAGAAGCACGGGCAGCCCCCGGCCTCCAGCAGATTCTTCCAACCCAGCTGGAAAGACATGATATGGACTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 90 bp AGCCTCTCAGAGCTACCGCAGGTGCCAAGCAGTGGCTGTGGAAAGTaGCGACGGGGCTGGATTGTTCTGAGGATACACCTGGAGCAATTT +
Preference number: 1 (lower is better)
Translates to: SLSELPQVPSSGCGK*RRGWIVLRIHLEQF
Trigger: AAATTGCTCCAGGTGTATCCTCAGAACAATCCAGCCCCGTCGTCACTTTCCACAGCCACTGCTTGGCACCTGCGGTAGCTCTGAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR TCA 90 bp GACGAGACAGATGGGTTCCTGTTTGCCTTCCAGATGGGCAGGCAATaGAAAGCCAGAAAGCAAGAGCACTTCACCGCGGTGCTGGGGAGA +
Preference number: 1 (lower is better)
Translates to: DETDGFLFAFQMGRQ*KARKQEHFTAVLGR
Trigger: TCTCCCCAGCACCGCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCAAACAGGAACCCATCTGTCTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR GCA 90 bp CCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCATaGTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGAT +
Preference number: 1 (lower is better)
Translates to: PSSLANVNGRLWGQP*YVTRWYSHSNTAQD
Trigger: ATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CCA 90 bp AGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAAT +
Preference number: 1 (lower is better)
Translates to: RECRPSSLANVNGRL*GQPCYVTRWYSHSN
Trigger: ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 90 bp TCTTTTTCCCAGTCAGAGACTGTCTCTACCAACCACGATGGAAGGTaGCACCAAAGCTTCTCCAACTGGCTTGTCAGAAGGATGGCCTGG +
Preference number: 1 (lower is better)
Translates to: SFSQSETVSTNHDGR*HQSFSNWLVRRMAW
Trigger: CCAGGCCATCCTTCTGACAAGCCAGTTGGAGAAGCTTTGGTGGCACCTTCCATCGTGGTTGGTAGAGACAGTCTCTGACTGGGAAAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR CCA 90 bp CTTCACAGCAGCCCTAAGAGGTACTATTACAAGGCCCATTTTCTCTaGTCATGCACACTGTCTGTGAACATGGGACACCTCAGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: LHSSPKRYYYKAHFL*SCTLSVNMGHLSRG
Trigger: CCCTCTGCTGAGGTGTCCCATGTTCACAGACAGTGTGCATGACCAGAGAAAATGGGCCTTGTAATAGTACCTCTTAGGGCTGCTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR GCA 90 bp AACTCAAACAAGCTGTTCTTCCACATGATGACAAGCTGGATGAAGTaGAACAGCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTC +
Preference number: 1 (lower is better)
Translates to: NSNKLFFHMMTSWMK*NSFFSPLQVAQVLF
Trigger: GAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTGGAAGAACAGCTTGTTTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR TCA 90 bp TTTGAAAGCCATCTCAGTGGGTGGAATGAGCATCCCTTCTTCTTCTaGGAGTCATGGTGGCGATCCAGTGACAGCGGATACGATGTGTTT +
Preference number: 1 (lower is better)
Translates to: FESHLSGWNEHPFFF*ESWWRSSDSGYDVF
Trigger: AAACACATCGTATCCGCTGTCACTGGATCGCCACCATGACTCTCAGAAGAAGAAGGGATGCTCATTCCACCCACTGAGATGGCTTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR TCA 90 bp GAACTGATCCTCAGTGAGTTAAAAATCTGGCCTTTAGGTGGTTTTTaGTATTCACTTCCCAACCCGTGGGCGGGAGAGGTCTCCTTTCCT +
Preference number: 1 (lower is better)
Translates to: ELILSELKIWPLGGF*YSLPNPWAGEVSFP
Trigger: AGGAAAGGAGACCTCTCCCGCCCACGGGTTGGGAAGTGAATATCAAAAACCACCTAAAGGCCAGATTTTTAACTCACTGAGGATCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 90 bp GATGATAAGCTGGTTTTTCTGGAAGGACATGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCG +
Preference number: 1 (lower is better)
Translates to: DDKLVFLEGHARVCM*LSNAANSEHTQRVS
Trigger: CGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATCACATACAAACCCTGGCATGTCCTTCCAGAAAAACCAGCTTATCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTaGCATAGATGTAGTAGACATAAGTCTTTCCTTGGTACCAATAGT +
Preference number: 1 (lower is better)
Translates to: SNTAQDSPPHTPGGQ*HRCSRHKSFLGTNS
Trigger: ACTATTGGTACCAAGGAAAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR TCA 90 bp CACCACACCACGATGGGTGTATTGTCGATATGCACAAATGCCTCGTaGTTTGAATTATACTTGAGATGGTGCCAAAAAGATTCAGGTGGT +
Preference number: 1 (lower is better)
Translates to: HHTTMGVLSICTNAS*FELYLRWCQKDSGG
Trigger: ACCACCTGAATCTTTTTGGCACCATCTCAAGTATAATTCAAATCACGAGGCATTTGTGCATATCGACAATACACCCATCGTGGTGTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 90 bp CACCACGATGGGTGTATTGTCGATATGCACAAATGCCTCGTGATTTaGATTATACTTGAGATGGTGCCAAAAAGATTCAGGTGGTCAAAC +
Preference number: 1 (lower is better)
Translates to: HHDGCIVDMHKCLVI*IILEMVPKRFRWSN
Trigger: GTTTGACCACCTGAATCTTTTTGGCACCATCTCAAGTATAATTCAAATCACGAGGCATTTGTGCATATCGACAATACACCCATCGTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 90 bp GTGTATTGTCGATATGCACAAATGCCTCGTGATTTGAATTATACTTaGGATGGTGCCAAAAAGATTCAGGTGGTCAAACTCACACACACA +
Preference number: 1 (lower is better)
Translates to: VYCRYAQMPRDLNYT*DGAKKIQVVKLTHT
Trigger: TGTGTGTGTGAGTTTGACCACCTGAATCTTTTTGGCACCATCTCAAGTATAATTCAAATCACGAGGCATTTGTGCATATCGACAATACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR GCA 90 bp GCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 2 (lower is better)
Translates to: AAGRGHGRPRQRCALQCPGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...GGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: QDAGTGGQGSAVLCNAPLEGQDL*SWGLPG
Trigger: CCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTC...CAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGGGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: RRTLNLDVPEPGGGASLRGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp ACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGGCAAGAGACCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 2 (lower is better)
Translates to: TGGQGSAVLCNAPLGGKRPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...TCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCCTCTCCCTGAGCAAGTaGTGCATCTTCGCCTGCCGG +
Preference number: 2 (lower is better)
Translates to: AAGRGHGRPRQRCALQCPLSLSK*CIFACR
Trigger: CCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAG...GGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR-3UTR GCA 90 bp ACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGTGGGTTGGAAGAATCTaGTGGAGGCCGGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: TRAREAKAALCSAMPLWEWVGRI*WRPGAA
Trigger: GGCAGCCCCCGGCCTCCAGCAGATTCTTCCAACCCA...CTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR CAA 90 bp CAGGATGGGCACCGCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGACCAGT +
Preference number: 2 (lower is better)
Translates to: QDGHRTVPAPWQPLH*YRPRPWHLWHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGCGGTGCCCATCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTATGGTCTGGCGCTGCTaGAGGACGCGGGCACGGGAG +
Preference number: 2 (lower is better)
Translates to: PRGSRCTCTAHAHGICGIMVWRC*RTRARE
Trigger: CTCCCGTGCCCGCGTCCTGCAGCAGCGCCAGACCAT...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCACTTCACCGCGGTGCTaGGGAGATGCCCCTACCTTC +
Preference number: 2 (lower is better)
Translates to: CCRTRAREAKAALCSAMPTSPRC*GDAPTF
Trigger: GAAGGTAGGGGCATCTCCCCAGCACCGCGGTGAAGT...GGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp ACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: TRAREAKAALCSAMPLWELPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...CTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 2 (lower is better)
Translates to: QDAGTGGQGSAVLCNAPLASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...CAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGAAGCCAGTCATAGCTaGGCAGTCTCTCCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: AGRGHGRPRQRCALQCPSEASHS*AVSPGA
Trigger: AGCTCCTGGAGAGACTGCCCAGCTATGACTGGCTTC...AGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGCGGTGCTGGGGAGATaGCCCTACCTTCGCCTGCCG +
Preference number: 2 (lower is better)
Translates to: GGKRDVSQREVHDGVHHRAVLGR*PYLRLP
Trigger: CGGCAGGCGAAGGTAGGGGCATCTCCCCAGCACCGC...TCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CCA 90 bp GGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 2 (lower is better)
Translates to: GGKRDVSQREVHDGVHHRTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...TCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TGCAACAGCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 2 (lower is better)
Translates to: CNSFFSPLQVAQVLFPLPTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...AGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCTGTTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 2 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 2 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 2 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp TGCAACAGCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTTGCTGCATCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 2 (lower is better)
Translates to: CNSFFSPLQVAQVLFPLPCCIFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCA...AGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCTGTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR-3UTR GCA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCCATTTTCTCTGGTCATaGACACTGTCTGTGAACATG +
Preference number: 2 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGHFLWS*TLSVNM
Trigger: CATGTTCACAGACAGTGTGCATGACCAGAGAAAATG...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CCA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGC +
Preference number: 2 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLAWLCA*LRSRMG
Trigger: GCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGC...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGAGAGGCGGGGGCTTCTaGGAAGGGCCTGTGGACTCA +
Preference number: 2 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLRGGGF*EGPVDS
Trigger: TGAGTCCACAGGCCCTTCCCAGAAGCCCCCGCCTCT...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR TCA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: RTPRTADISGTAWLCAWLNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp TCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SLKVSRRYLQRVCRFSSWGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...CCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCAGCACTTCACCGCGGTaGTGGGGAGATGCCCCTACC +
Preference number: 2 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLSTSPR*WGDAPT
Trigger: GGTAGGGGCATCTCCCCAGCACCGCGGTGAAGTGCT...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CCA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 2 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 2 (lower is better)
Translates to: HTQRVSAIFLGKREWQALTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCCACATGATGACAAGCTaGATGAAGTGCAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: AAGRGHGRPRQRCALQCPHMMTS*MKCNSF
Trigger: GAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG...GGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGTGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 2 (lower is better)
Translates to: QDAGTGGQGSAVLCNAPLCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...CAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp GCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTGAGCAAGCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: ASSPPCRWRRSCSLSLSKLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...CTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp CCCAACCCGTGGGCGGGAGAGGTCTCCTTTCCTGGTAACCCCGTCCCTGTGTTTGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 2 (lower is better)
Translates to: PNPWAGEVSFPGNPVPVFAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...AAACACAGGGACGGGGTTACCAGGAAAGGAGACCTCTCCCGCCCACGGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp CGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGGGGGGCTGGATTGTTCTaGGGATACACCTGGAGCAAT +
Preference number: 2 (lower is better)
Translates to: RRTLNLDVPEPGGGASLRGAGLF*GYTWSN
Trigger: ATTGCTCCAGGTGTATCCTCAGAACAATCCAGCCCC...CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR GCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCATGCTGCATCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 2 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSCCIFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCA...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR-3UTR GCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GTCCACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: VHSLILDSLKVSRRYLQREGQDL*SWGLPG
Trigger: CCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTC...CCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGCCTGGGGGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: SLGEAPLCGPSTEWLVKGLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...ACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCAACCCTCAATGGGCATaGGATCCAGTATTCATCCAT +
Preference number: 2 (lower is better)
Translates to: CCRTRAREAKAALCSAMPNPQWA*DPVFIH
Trigger: ATGGATGAATACTGGATCCCATGCCCATTGAGGGTT...GGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR CAA 90 bp AGGGACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGG +
Preference number: 2 (lower is better)
Translates to: RDLELPGVFLKHRRT*NLDVPEPGGGASLR
Trigger: CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CAA 90 bp ATGAAGTGCAACAGCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAAGTGCTGCATCTTCGCCTGCCGGAC +
Preference number: 2 (lower is better)
Translates to: MKCNSFFSPLQVAQV*FPLPEQVLHLRLPD
Trigger: GTCCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCTGTTGCACTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR-3UTR TCA 90 bp CCCAACCCGTGGGCGGGAGAGGTCTCCTTTCCTGGTAACCCCGTCCCTGTGTTTAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: PNPWAGEVSFPGNPVPVFNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...AAACACAGGGACGGGGTTACCAGGAAAGGAGACCTCTCCCGCCCACGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp GTCCACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 2 (lower is better)
Translates to: VHSLILDSLKVSRRYLQRDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...CCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp TGCCTTCCAGATGGGCAGGCAATGAAAAGCCAGAAAGCAAGAGCACTTCACCGCGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 2 (lower is better)
Translates to: CLPDGQAMKSQKARALHRDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...GCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp GGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGACTCACATCAGTCCCCTaGCCCAAACCCTCAATGGGC +
Preference number: 2 (lower is better)
Translates to: GGKRDVSQREVHDGVHHRLTSVP*PKPSMG
Trigger: GCCCATTGAGGGTTTGGGTCAGGGGACTGATGTGAG...TCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR GCA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 2 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp AGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGTTTTCATCGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: RDVSQREVHDGVHHRVFIGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...GATGAAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACTCATCGCAGGGACTCTaGAGGGGACCGAACAGAGAG +
Preference number: 2 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHSSQGL*RGPNRE
Trigger: CTCTCTGTTCGGTCCCCTGCAGAGTCCCTGCGATGA...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR CCA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCATCTCCGGGACTGCTTaGCTTTGCGCTTGGCTCCGC +
Preference number: 2 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCISGTA*LCAWLR
Trigger: GCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGAT...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCGAAGCCAGTCATAGCTaGGCAGTCTCTCCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: LKHRRTLNLDVPEPGGGAEASHS*AVSPGA
Trigger: AGCTCCTGGAGAGACTGCCCAGCTATGACTGGCTTC...GGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGTTGGAAGAATCTGCTaGAGGCCGGGGGCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSVGRIC*RPGAAR
Trigger: ACGGGCAGCCCCCGGCCTCCAGCAGATTCTTCCAAC...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACTCACTTCCCAACCCGTaGGCGGGAGAGGTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHSLPNP*AGEVSF
Trigger: AAAGGAGACCTCTCCCGCCCACGGGTTGGGAAGTGA...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: GRLWGQPCYVTRWYSHSNLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 2 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGGCCAAGCAGTGGCTGTaGAAAGTGACGACGGGGCTG +
Preference number: 2 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQAKQWL*KVTTGL
Trigger: CAGCCCCGTCGTCACTTTCCACAGCCACTGCTTGGC...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR CCA 90 bp ACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGGCAAGAGATCCACCACACCACGATaGGTGTATTGTCGATATGCA +
Preference number: 2 (lower is better)
Translates to: TGGQGSAVLCNAPLGGKRSTTPR*VYCRYA
Trigger: TGCATATCGACAATACACCCATCGTGGTGTGGTGGA...TCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: HTQRVSAIFLGKREWQALLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp CACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: HTHHRGINLETRGKVLAIASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...AATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR GCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCAGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: HSLILDSLKVSRRYLQRVRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...GACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGGACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 2 (lower is better)
Translates to: RRTLNLDVPEPGGGASLRTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TCCACCACACCACGATGGGTGTATTGTCGATATGCACAAATGCCTCGTGATTTGACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 2 (lower is better)
Translates to: STTPRWVYCRYAQMPRDLTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...CAAATCACGAGGCATTTGTGCATATCGACAATACACCCATCGTGGTGTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CCA 90 bp CCCATTTTCTTAACAAGGATTTCCCAACAACTGGTTTCCATAGGTACCACAGGGGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: PIFLTRISQQLVSIGTTGGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...CCCTGTGGTACCTATGGAAACCAGTTGTTGGGAAATCCTTGTTAAGAAAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR CCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATAGCAGGTGCCAAGCAGTaGCTGTGGAAAGTGACGACG +
Preference number: 2 (lower is better)
Translates to: AGSGDSHAMSHDGTATAIAGAKQ*LWKVTT
Trigger: CGTCGTCACTTTCCACAGCCACTGCTTGGCACCTGC...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR CAA 90 bp AGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTCCA +
Preference number: 2 (lower is better)
Translates to: RTLNLDVPEPGGGAS*RPIHRVVSKGLKCP
Trigger: TGGACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CAA 90 bp CACATGATGACAAGCTGGATGAAGTGCAACAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTGAGCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: HMMTSWMKCNSFFSP*QVAQVLFPLPEQVL
Trigger: CAGCACTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: ELPGVFLKHRRTLNLDVPASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...TGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp CGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGGTGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 2 (lower is better)
Translates to: RRTLNLDVPEPGGGASLRWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCTTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 2 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp TCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: SLKVSRRYLQRVCRFSSWICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...CCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CCCATTTTCTTAACAAGGATTTCCCAACAACTGGTTTCCATAGGTACCACAGGGCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 2 (lower is better)
Translates to: PIFLTRISQQLVSIGTTGPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...CCCTGTGGTACCTATGGAAACCAGTTGTTGGGAAATCCTTGTTAAGAAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR GCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: ELPGVFLKHRRTLNLDVPAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...TGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGACTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTC +
Preference number: 2 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTVNGRL*GQPCYV
Trigger: GACATAGCATGGCTGTCCCCAGAGCCTGCCATTCAC...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CAA 90 bp CAGAGCTCTGGGGACACAGCAGTGACGAGACAGATGGGTTCCTGTTaGCCTTCCAGATGGGCAGGCAATGAAAAGCCAGAAAGCAAGAGC +
Preference number: 2 (lower is better)
Translates to: QSSGDTAVTRQMGSC*PSRWAGNEKPESKS
Trigger: GCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCAAACAGGAACCCATCTGTCTCGTCACTGCTGTGTCCCCAGAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTTGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 2 (lower is better)
Translates to: PRGSRCTCTAHAHGICGICRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp AGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGTTTTCATCGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 2 (lower is better)
Translates to: RDVSQREVHDGVHHRVFIAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...GATGAAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCG +
Preference number: 2 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCLVPSP*ASAASS
Trigger: CGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR-3UTR TCA 90 bp CTCCAACTGGCTTGTCAGAAGGATGGCCTGGGCTTTAATGAGGCAAAAGTATCAGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 2 (lower is better)
Translates to: LQLACQKDGLGFNEAKVSAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...TGATACTTTTGCCTCATTAAAGCCCAGGCCATCCTTCTGACAAGCCAGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGCATGCACACTGTCTGTaGACATGGGACACCTCAGCA +
Preference number: 2 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQHAHCL*TWDTSA
Trigger: TGCTGAGGTGTCCCATGTTCACAGACAGTGTGCATG...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR GCA 90 bp CTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 2 (lower is better)
Translates to: LKHRRTLNLDVPEPGGGATPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...GGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGCGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 2 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 2 (lower is better)
Translates to: AGSGDSHAMSHDGTATAIRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGCGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 2 (lower is better)
Translates to: HTQRVSAIFLGKREWQALRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTATCTCCGGGACTGCTTaGCTTTGCGCTTGGCTCCGC +
Preference number: 2 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLISGTA*LCAWLR
Trigger: GCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGAT...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCT +
Preference number: 2 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQSAMPL*EAREMS
Trigger: AGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGA...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGGGGATCAGCTCAATaGTCTGGCGCTGCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLGGSAQ*SGAAAG
Trigger: TCCTGCAGCAGCGCCAGACCATTGAGCTGATCCCCC...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGGGGGATCAGCTCAATaGTCTGGCGCTGCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDGGSAQ*SGAAAG
Trigger: TCCTGCAGCAGCGCCAGACCATTGAGCTGATCCCCC...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CACATATATTGCATGACGAGTTCCAGCCTTGTCCAGAAATGCCAGGCCTTGAGATCTCCAGGAGCTCTGTaGGGGGCGCCAGAGGACTCT +
Preference number: 2 (lower is better)
Translates to: HIYCMTSSSLVQKCQALRSPGAL*GAPEDS
Trigger: AGAGTCCTCTGGCGCCCCCCACAGAGCTCCTGGAGA...TCTCAAGGCCTGGCATTTCTGGACAAGGCTGGAACTCGTCATGCAATATATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCATCTTTCCAGCTGGGTTaGAAGAATCTGCTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSSFQLG*KNLLEA
Trigger: GGCCTCCAGCAGATTCTTCCAACCCAGCTGGAAAGA...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp CATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACTTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 2 (lower is better)
Translates to: HAMSHDGTATAIPLRIVHLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...GTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: HTQRVSAIFLGKREWQALICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACATTCTACTGTCGATTTaGAAGCCATCTCAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHILLSI*KPSQWV
Trigger: CACCCACTGAGATGGCTTTCAAATCGACAGTAGAAT...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR TCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGTCTCGGCCTCAAAACTaGGGTCCACCACACCACGAT +
Preference number: 2 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQSRPQN*GPPHHD
Trigger: ATCGTGGTGTGGTGGACCTCAGTTTTGAGGCCGAGA...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR GCA 90 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGTCCCATACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 2 (lower is better)
Translates to: ELPGVFLKHRRTLNLDVPYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...TGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAATGGTCTGGCGCTGCTaGAGGACGCGGGCACGGGAG +
Preference number: 2 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGMVWRC*RTRARE
Trigger: CTCCCGTGCCCGCGTCCTGCAGCAGCGCCAGACCAT...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGTGCCGCTTCAGCTCCTaGATGACGAGGTCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLCRFSS*MTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCA...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGTACCGCCCACGCCCATaGCATTTGTGGCATTCCTTG +
Preference number: 2 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQYRPRP*HLWHSL
Trigger: CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTA...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 2 (lower is better)
Translates to: HSLILDSLKVSRRYLQRVEGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...GACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCGTAACTGGAGGACTGTaGGTATTAGGTGTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLVTGGL*VLGVQE
Trigger: TTCTTGGACACCTAATACCCACAGTCCTCCAGTTAC...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR TCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACTGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 2 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTTCTCAGTGGGTGGAATaGGCATCCCTTCTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCSQWVE*ASLLLL
Trigger: CAGAAGAAGAAGGGATGCTCATTCCACCCACTGAGA...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR TCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCATCTCGGCCTCAAAACTaGGGTCCACCACACCATACA +
Preference number: 2 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPSRPQN*GPPHHT
Trigger: TGTATGGTGTGGTGGACCTCAGTTTTGAGGCCGAGA...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR GCA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGTTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 2 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CACAGAGTGGTTAGTAAAGGGTTGAAATGTCCACTCGCTTATCCTGGATTCACTGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: HRVVSKGLKCPLAYPGFTGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...AGTGAATCCAGGATAAGCGAGTGGACATTTCAACCCTTTACTAACCACTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGACTCTCCCTGAGCAAGTaGTGCATCTTCGCCTGCCGG +
Preference number: 2 (lower is better)
Translates to: YESWIPPEELYKGLELDRLSLSK*CIFACR
Trigger: CCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAG...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR-3UTR GCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGCCGGGGGCTGCCCGTaGTTCTGTGTGTCTGCTCAC +
Preference number: 2 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGAGGCP*FCVSAH
Trigger: GTGAGCAGACACACAGAAGCACGGGCAGCCCCCGGC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGAATCGGGGCATTAACTTaGAGACCAGAGGCAAAGTCC +
Preference number: 2 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRIGALT*RPEAKS
Trigger: GGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR CCA 90 bp CATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCT +
Preference number: 2 (lower is better)
Translates to: HAMSHDGTATAIPLRIVHSAMPL*EAREMS
Trigger: AGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGA...GTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATCATCCCTTCTTCTTCTaGGAGTCATGGTGGCGATCC +
Preference number: 2 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDHPFFF*ESWWRS
Trigger: GGATCGCCACCATGACTCTCAGAAGAAGAAGGGATG...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR GCA 90 bp ATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTTACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 2 (lower is better)
Translates to: IVHRIHLVVSAIDVVDISYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...ACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGTACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 2 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAAC +
Preference number: 2 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDGQLSR*SDTNSN
Trigger: GTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCC...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAAC +
Preference number: 2 (lower is better)
Translates to: ELPGVFLKHRRTLNLDVPGQLSR*SDTNSN
Trigger: GTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCC...TGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATAACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 2 (lower is better)
Translates to: AGSGDSHAMSHDGTATAITPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp TGCCTTCCAGATGGGCAGGCAATGAAAAGCCAGAAAGCAAGAGCACTTCACCGCAGAATATCTGTCCTCTaGCCCCTTGAAGAAGCCAGT +
Preference number: 2 (lower is better)
Translates to: CLPDGQAMKSQKARALHRRISVL*PLEEAS
Trigger: ACTGGCTTCTTCAAGGGGGCAGAGGACAGATATTCT...GCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR GCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGAGAGCACCTACTACGTaGAGAGCTCTGGGGACACAG +
Preference number: 2 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKRAPTT*RALGTQ
Trigger: CTGTGTCCCCAGAGCTCTGCACGTAGTAGGTGCTCT...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 2 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 2 (lower is better)
Translates to: YESWIPPEELYKGLELDRLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCATTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 2 (lower is better)
Translates to: MAGSGDSHAMSHDGTATAFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GTAGACATAAGTCTTTCCTTGGTACCAATAGTGAACTTCTGTGAGGGGGATCAGGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 2 (lower is better)
Translates to: VDISLSLVPIVNFCEGDQASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...CTGATCCCCCTCACAGAAGTTCACTATTGGTACCAAGGAAAGACTTATGTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGAGAATATCTGTCCTCTaGCCCCTTGAAGAAGCCAGT +
Preference number: 2 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQRISVL*PLEEAS
Trigger: ACTGGCTTCTTCAAGGGGGCAGAGGACAGATATTCT...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCTTATACTTGAGATGGTaGCAAAAAGATTCAGGTGGT +
Preference number: 2 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLLYLRW*QKDSGG
Trigger: ACCACCTGAATCTTTTTGGCACCATCTCAAGTATAA...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 2 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGCGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 2 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGATCAGCTCAATGGTCTaGCGCTCTACGTCCTCATCC +
Preference number: 2 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLISSMV*RSTSSS
Trigger: GGATGAGGACGTAGAGCGCCAGACCATTGAGCTGAT...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415132.5
3UTR-3UTR CCA 90 bp ACGAGACAGATGGGTTCCTGTTTGCCTTCCAGATGGGCAGGCAATGAAAAGCCATCATGTCTTTCCAGCTaGGTTGGAAGAATCTGCTGG +
Preference number: 2 (lower is better)
Translates to: TRQMGSCLPSRWAGNEKPSCLSS*VGRICW
Trigger: CCAGCAGATTCTTCCAACCCAGCTGGAAAGACATGA...TGGCTTTTCATTGCCTGCCCATCTGGAAGGCAAACAGGAACCCATCTGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCATGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 2 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSCRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp CACAGAGTGGTTAGTAAAGGGTTGAAATGTCCACTCGCTTATCCTGGATTCACTCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCG +
Preference number: 2 (lower is better)
Translates to: HRVVSKGLKCPLAYPGFTLVPSP*ASAASS
Trigger: CGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...AGTGAATCCAGGATAAGCGAGTGGACATTTCAACCCTTTACTAACCACTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR-3UTR GCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCAGAGGCAAAGTCCTTaGCATTTAAATTATTTCTCT +
Preference number: 2 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHQRQSP*HLNYFS
Trigger: AGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTG...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGACTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 2 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATTGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 2 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGGGGGATCAGCTCAATaGTCTGGCGCTCTACGTCCT +
Preference number: 2 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGGGSAQ*SGALRP
Trigger: AGGACGTAGAGCGCCAGACCATTGAGCTGATCCCCC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415132.5
3UTR-3UTR TCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCATGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 2 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp GTAGACATAAGTCTTTCCTTGGTACCAATAGTGAACTTCTGTGAGGGGGATCAGAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: VDISLSLVPIVNFCEGDQNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...CTGATCCCCCTCACAGAAGTTCACTATTGGTACCAAGGAAAGACTTATGTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 2 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp CACAGAGTGGTTAGTAAAGGGTTGAAATGTCCACTCGCTTATCCTGGATTCACTGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 2 (lower is better)
Translates to: HRVVSKGLKCPLAYPGFTEGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...AGTGAATCCAGGATAAGCGAGTGGACATTTCAACCCTTTACTAACCACTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CAA 90 bp CACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTCTGTGAGGGGGATCAGCTCAATGGT +
Preference number: 2 (lower is better)
Translates to: HLVVSAIDVVDISLS*VPIVNFCEGDQLNG
Trigger: ACCATTGAGCTGATCCCCCTCACAGAAGTTCACTATTGGTACCAAGGAAAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR TCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 2 (lower is better)
Translates to: ANSEHTQRVSAIFLGKRECRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp CATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACTTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 2 (lower is better)
Translates to: HAMSHDGTATAIPLRIVHFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...GTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: RYLCVSLNISVILRSSRGRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR GCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 2 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGTTTTCATCAATCTGGCCTTTAGGTaGTTTTTGATATTCACTTCC +
Preference number: 2 (lower is better)
Translates to: RDVSQREVHDGVHHRVFINLAFR*FLIFTS
Trigger: GGAAGTGAATATCAAAAACCACCTAAAGGCCAGATT...GATGAAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAAC +
Preference number: 2 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGARVCM*LSNAAN
Trigger: GTTGGCTGCATTGGACAATCACATACAAACCCTGGC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp ATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTGGGGACAGCCATaGTATGTCACACGATGGTAC +
Preference number: 2 (lower is better)
Translates to: IGALTWRPEAKSLPFKLFLWGQP*YVTRWY
Trigger: GTACCATCGTGTGACATAGCATGGCTGTCCCCAGAG...AAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR CCA 90 bp GAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCACATCGGGGCATTAACTTaGAGACCAGAGGCAAAGTCC +
Preference number: 2 (lower is better)
Translates to: EEAHQNQDRQREKAKSNHIGALT*RPEAKS
Trigger: GGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT...GTGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR CCA 90 bp ATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCACATGATGACAAGCTaGATGAAGTGCAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: IVHRIHLVVSAIDVVDISHMMTS*MKCNSF
Trigger: GAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG...ACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGAGAATTATACTTGAGATaGTGCCAAAAAGATTCAGGT +
Preference number: 2 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRELYLR*CQKDSG
Trigger: ACCTGAATCTTTTTGGCACCATCTCAAGTATAATTC...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR GCA 90 bp GTAGACATAAGTCTTTCCTTGGTACCAATAGTGAACTTCTGTGAGGGGGATCAGACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 2 (lower is better)
Translates to: VDISLSLVPIVNFCEGDQTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...CTGATCCCCCTCACAGAAGTTCACTATTGGTACCAAGGAAAGACTTATGTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CCA 90 bp TACAAGGCCCATTTTCTTAACAAGGATTTCCCAACAACTGGTTTCCATAGGTACAGCCATCTCAGTGGGTaGAATGAGCATCCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: YKAHFLNKDFPTTGFHRYSHLSG*NEHPFF
Trigger: GAAGAAGGGATGCTCATTCCACCCACTGAGATGGCT...GTACCTATGGAAACCAGTTGTTGGGAAATCCTTGTTAAGAAAATGGGCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR GCA 90 bp TTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACTTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 2 (lower is better)
Translates to: FSNTQIVKRLPLEEAHQNFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...GTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR TCA 90 bp GAACATTTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACTGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 2 (lower is better)
Translates to: EHFSNTQIVKRLPLEEAHCRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...GTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAAATGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR CCA 90 bp AACCCAACCTTGAGTATTTTTACTCCTCACGGTTTCCTGTTTCCCTTAAAAAGTTGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 2 (lower is better)
Translates to: NPTLSIFTPHGFLFPLKSCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...ACTTTTTAAGGGAAACAGGAAACCGTGAGGAGTAAAAATACTCAAGGTTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR TCA 90 bp GTAGACATAAGTCTTTCCTTGGTACCAATAGTGAACTTCTGTGAGGGGGATCAGAAATGCCTCGTGATTTaGATTATACTTGAGATGGTG +
Preference number: 2 (lower is better)
Translates to: VDISLSLVPIVNFCEGDQKCLVI*IILEMV
Trigger: CACCATCTCAAGTATAATTCAAATCACGAGGCATTT...CTGATCCCCCTCACAGAAGTTCACTATTGGTACCAAGGAAAGACTTATGTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR GCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGACAGAGGCAAAGTCCTTaGCATTTAAATTATTTCTCT +
Preference number: 2 (lower is better)
Translates to: YESWIPPEELYKGLELDRQRQSP*HLNYFS
Trigger: AGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTG...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
3UTR-3UTR GCA 90 bp GCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 2 (lower is better)
Translates to: ALTWRPEAKSLPFKLFLSFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...TGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR GCA 90 bp AGAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCACAGAGGCAAAGTCCTTaGCATTTAAATTATTTCTCT +
Preference number: 2 (lower is better)
Translates to: RRSTPEPRPTKGKSKIKSQRQSP*HLNYFS
Trigger: AGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTG...TGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR CAA 90 bp TGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCGAGGGCCAGGACCTTaGCTCCTGGGGCCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: CCRTRAREAKAALCSAMPRGPGP*LLGPPW
Trigger: CCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCG...GGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR GCA 72 bp ATGGGCACCGCACCGTGCCCGCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCCCATGGCATTTGTGGC +
Preference number: 3 (lower is better)
Translates to: MGTAPCPPRGSR*TCTAHAHGICG
Trigger: GCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGCGGTGCCCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 72 bp CTTCCCGGGCCACCTCCTCCGTCATCGCAGGGACTCTaGAGGGGACCGAACAGAGAGGCGGGGGCTTCTGGG +
Preference number: 3 (lower is better)
Translates to: LPGPPPPSSQGL*RGPNREAGASG
Trigger: CCCAGAAGCCCCCGCCTCTCTGTTCGGTCCCCTGCAGAGTCCCTGCGATGACGGAGGAGGTGGCCCGGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR CAA 90 bp CAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGTGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 3 (lower is better)
Translates to: QDAGTGGQGSAVLCNAPLCLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...CAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 72 bp CCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGGATGGGCACCGCACCG +
Preference number: 3 (lower is better)
Translates to: PRTADISGTAWL*AWLRSRMGTAP
Trigger: CGGTGCGGTGCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR TCA 72 bp CCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCGCCTGCCGGACCCCGC +
Preference number: 3 (lower is better)
Translates to: PLAGGAGLVPSP*ASAASSPAGPR
Trigger: GCGGGGTCCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR TCA 72 bp TGCCCCTACCTTCGCCTGCCGGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTGGCTTTGCGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: CPYLRLPDPAHS*HLRDCLALRLA
Trigger: AGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCGGCAGGCGAAGGTAGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR GCA 72 bp GACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGCAAGAGAGATGTCTCG +
Preference number: 3 (lower is better)
Translates to: DAGTGGQGSAVL*NAPLGGKRDVS
Trigger: CGAGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 72 bp GGGACTCTGTGTTCCAGGAACGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGGGCCTCCAAAGGTGGG +
Preference number: 3 (lower is better)
Translates to: GTLCSRNEGQDL*SWGLPGASKGG
Trigger: CCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCGTTCCTGGAACACAGAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR GCA 72 bp AGAAAGCAAGAGCACTTCACCGCGGTGCTGGGGAGATaGCCCTACCTTCGCCTGCCGGACCCCGCGCACAGC +
Preference number: 3 (lower is better)
Translates to: RKQEHFTAVLGR*PYLRLPDPAHS
Trigger: GCTGTGCGCGGGGTCCGGCAGGCGAAGGTAGGGGCATCTCCCCAGCACCGCGGTGAAGTGCTCTTGCTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 72 bp GTGCTGCATCTTCGCCTGCCGGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTGGCTTTGCGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: VLHLRLPDPAHS*HLRDCLALRLA
Trigger: AGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR GCA 72 bp GGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAGAGATGTCTCGCAGAG +
Preference number: 3 (lower is better)
Translates to: GHGRPRQRCALQ*PSGRQERCLAE
Trigger: CTCTGCGAGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 72 bp CATCTCCTGTGTTCCAGGAACGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGGGCCTCCAAAGGTGGG +
Preference number: 3 (lower is better)
Translates to: HLLCSRNEGQDL*SWGLPGASKGG
Trigger: CCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCGTTCCTGGAACACAGGAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR TCA 72 bp GGTACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCGTGCTGCTGTAGCAGC +
Preference number: 3 (lower is better)
Translates to: GTCRGSAASAPG*RGLQPPCCCSS
Trigger: GCTGCTACAGCAGCACGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCTGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGG +
Preference number: 3 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCWQPLH*YRPRPW
Trigger: CCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR TCA 72 bp GGGCCAGCCAGCCTCCTCAACGTGCAGGCGAGAAACTaGGGCCACGGTAGTGGTAAAGCCCTCAGCAGTCCA +
Preference number: 3 (lower is better)
Translates to: GPASLLNVQARN*GHGSGKALSSP
Trigger: TGGACTGCTGAGGGCTTTACCACTACCGTGGCCTCAGTTTCTCGCCTGCACGTTGAGGAGGCTGGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR GCA 72 bp CTGTGGACTCACGCGGGCCAGCCAGCCTCCTCAACGTaGAGGCGAGAAACTGAGGCCACGGTAGTGGTAAAG +
Preference number: 3 (lower is better)
Translates to: LWTHAGQPASST*RRETEATVVVK
Trigger: CTTTACCACTACCGTGGCCTCAGTTTCTCGCCTGCACGTTGAGGAGGCTGGCTGGCCCGCGTGAGTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR CCA 72 bp GAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: EAKAALCSAMPL*EAREMSRRGKS
Trigger: GGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: PRGSRCTCTAHAHGICGICRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CCA 72 bp GAACGAGGGCCAGGACCTTTGCTCCTGGGGCCTCCCTaGGGCCTCCAAAGGTGGGAAGAATATCTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: ERGPGPLLLGPP*GLQRWEEYLSS
Trigger: AGAGGACAGATATTCTTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR GCA 72 bp TCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATGACGAGGTCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: SLKVSRRYLQRV*RFSSWMTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp CAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: QDAGTGGQGSAVLCNAPLIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...CAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCCCAGAGGCAAAGTCCTaGCCATTTAAATTATTTCTC +
Preference number: 3 (lower is better)
Translates to: AAGRGHGRPRQRCALQCPPEAKS*PFKLFL
Trigger: GAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGG...GGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp TTGGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 3 (lower is better)
Translates to: LALARSSLGQLSRCSDTNQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...GTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 3 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR TCA 72 bp GAGCTACCGCAGGTGCCAAGCAGTGGCTGTGGAAAGTaGCGACGGGGCTGGATTGTTCTGAGGATACACCTG +
Preference number: 3 (lower is better)
Translates to: ELPQVPSSGCGK*RRGWIVLRIHL
Trigger: CAGGTGTATCCTCAGAACAATCCAGCCCCGTCGTCACTTTCCACAGCCACTGCTTGGCACCTGCGGTAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR CCA 72 bp CCTCTCAGAGCTACCGCAGGTGCCAAGCAGTGGCTGTaGAAAGTGACGACGGGGCTGGATTGTTCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: PLRATAGAKQWL*KVTTGLDCSED
Trigger: ATCCTCAGAACAATCCAGCCCCGTCGTCACTTTCCACAGCCACTGCTTGGCACCTGCGGTAGCTCTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR CAA 90 bp CCCAACCCGTGGGCGGGAGAGGTCTCCTTTCCTGGTAACCCCGTCCCTGTGTTTAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: PNPWAGEVSFPGNPVPVFKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...AAACACAGGGACGGGGTTACCAGGAAAGGAGACCTCTCCCGCCCACGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 72 bp CCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTAGGCCTGTAAATCGACTT +
Preference number: 3 (lower is better)
Translates to: PLAGGAGLVPSP*ASAASRPVNRL
Trigger: AAGTCGATTTACAGGCCTAGATGCAGCACTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR GCA 72 bp TCCATATCATGTCTTTCCAGCTGGGTTGGAAGAATCTaGTGGAGGCCGGGGGCTGCCCGTGCTTCTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SISCLSSWVGRI*WRPGAARASVC
Trigger: ACACACAGAAGCACGGGCAGCCCCCGGCCTCCAGCAGATTCTTCCAACCCAGCTGGAAAGACATGATATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR CCA 72 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATaGTACAGCCACAGCAATACCGCTCAGGATAGTCCA +
Preference number: 3 (lower is better)
Translates to: GRLWGQPCYVTR*YSHSNTAQDSP
Trigger: TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CCA 72 bp CGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTCACACGATGGTACAGC +
Preference number: 3 (lower is better)
Translates to: RPSSLANVNGRL*GQPCYVTRWYS
Trigger: GCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTGAGCAAGAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 3 (lower is better)
Translates to: ASSPPCRWRRSCSLSLSKRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...CTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 3 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp CACAGCAGTGACGAGACAGATGGGTTCCTGTTTGCCTTCCAGATGGGCAGGCAACCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 3 (lower is better)
Translates to: HSSDETDGFLFAFQMGRQPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...TTGCCTGCCCATCTGGAAGGCAAACAGGAACCCATCTGTCTCGTCACTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CAA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATCATCTCCGGGACTGCTaGGCTTTGCGCTTGGCTCCG +
Preference number: 3 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDHLRDC*ALRLAP
Trigger: CGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATG...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR TCA 72 bp CACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGACAGCCATGCTATGTCA +
Preference number: 3 (lower is better)
Translates to: HSESVGHLPWQT*MAGSGDSHAMS
Trigger: TGACATAGCATGGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR TCA 72 bp GCCCGTGCTTCTGTGTGTCTGCTCACATCAGTCCCCTaGCCCAAACCCTCAATGGGCATGGGATCCAGTATT +
Preference number: 3 (lower is better)
Translates to: ARASVCLLTSVP*PKPSMGMGSSI
Trigger: AATACTGGATCCCATGCCCATTGAGGGTTTGGGTCAGGGGACTGATGTGAGCAGACACACAGAAGCACGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 72 bp GCACCTACTACGTGCAGAGCTCTGGGGACACAGCAGTaGCGAGACAGATGGGTTCCTGTTTGCCTTCCAGAT +
Preference number: 3 (lower is better)
Translates to: APTTCRALGTQQ*RDRWVPVCLPD
Trigger: ATCTGGAAGGCAAACAGGAACCCATCTGTCTCGTCACTGCTGTGTCCCCAGAGCTCTGCACGTAGTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CAA 90 bp CACATATATTGCATGACGAGTTCCAGCCTTGTCCAGAAATGCCAGGCCTTGAGATGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 3 (lower is better)
Translates to: HIYCMTSSSLVQKCQALRCLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...TCTCAAGGCCTGGCATTTCTGGACAAGGCTGGAACTCGTCATGCAATATATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 72 bp ACAAGGCCCATTTTCTCTGGTCATGCACACTGTCTGTaGACATGGGACACCTCAGCAGAGGGGGCCTTTCAG +
Preference number: 3 (lower is better)
Translates to: TRPIFSGHAHCL*TWDTSAEGAFQ
Trigger: CTGAAAGGCCCCCTCTGCTGAGGTGTCCCATGTTCACAGACAGTGTGCATGACCAGAGAAAATGGGCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 72 bp GATGGGTTCCTGTTTGCCTTCCAGATGGGCAGGCAATaGAAAGCCAGAAAGCAAGAGCACTTCACCGCGGTG +
Preference number: 3 (lower is better)
Translates to: DGFLFAFQMGRQ*KARKQEHFTAV
Trigger: CACCGCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCAAACAGGAACCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR GCA 72 bp GCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAACAAGCTGTTCTTCCAC +
Preference number: 3 (lower is better)
Translates to: ALARSSLGQLSR*SDTNSNKLFFH
Trigger: GTGGAAGAACAGCTTGTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR GCA 72 bp TTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCATaGTATGTCACACGATGGTACAGCCACAGCAATACC +
Preference number: 3 (lower is better)
Translates to: LANVNGRLWGQP*YVTRWYSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CCA 72 bp CAAATAACCACAGAGCACCTACTACGTGCAGAGCTCTaGGGACACAGCAGTGACGAGACAGATGGGTTCCTG +
Preference number: 3 (lower is better)
Translates to: QITTEHLLRAEL*GHSSDETDGFL
Trigger: CAGGAACCCATCTGTCTCGTCACTGCTGTGTCCCCAGAGCTCTGCACGTAGTAGGTGCTCTGTGGTTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CAA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 3 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 3 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGCTGTCCTCTGCCCCCTaGAAGAAGCCAGTCATAGCT +
Preference number: 3 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQLSSAP*KKPVIA
Trigger: AGCTATGACTGGCTTCTTCAAGGGGGCAGAGGACAG...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR TCA 72 bp CATCTCAGTGGGTGGAATGAGCATCCCTTCTTCTTCTaGGAGTCATGGTGGCGATCCAGTGACAGCGGATAC +
Preference number: 3 (lower is better)
Translates to: HLSGWNEHPFFF*ESWWRSSDSGY
Trigger: GTATCCGCTGTCACTGGATCGCCACCATGACTCTCAGAAGAAGAAGGGATGCTCATTCCACCCACTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR GCA 72 bp CAGTCAGAGACTGTCTCTACCAACCACGATGGAAGGTaGCACCAAAGCTTCTCCAACTGGCTTGTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: QSETVSTNHDGR*HQSFSNWLVRR
Trigger: CCTTCTGACAAGCCAGTTGGAGAAGCTTTGGTGGCACCTTCCATCGTGGTTGGTAGAGACAGTCTCTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CAA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACACTATGATAGGCATGTaGCTTCCATGTTATCCTTCC +
Preference number: 3 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHTMIGM*LPCYPS
Trigger: GGAAGGATAACATGGAAGCAACATGCCTATCATAGT...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGTCTTTCCAGCTGGGTaGGAAGAATCTGCTGGAGGC +
Preference number: 3 (lower is better)
Translates to: ELPGVFLKHRRTLNLDVPVFPAG*EESAGG
Trigger: GCCTCCAGCAGATTCTTCCAACCCAGCTGGAAAGAC...TGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CAA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 3 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 3 (lower is better)
Translates to: GRLWGQPCYVTRWYSHSNVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCAGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTG +
Preference number: 3 (lower is better)
Translates to: ALTWRPEAKSLPFKLFLSGGGAS*RPIHRV
Trigger: CACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC...TGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR CAA 90 bp CACAGAGTGGTTAGTAAAGGGTTGAAATGTCCACTCGCTTATCCTGGATTCACTAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: HRVVSKGLKCPLAYPGFTSFFSP*QVAQVL
Trigger: CAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCT...AGTGAATCCAGGATAAGCGAGTGGACATTTCAACCCTTTACTAACCACTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp TTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: FSNTQIVKRLPLEEAHQNCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...GTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR CAA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: YESWIPPEELYKGLELDRCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 3 (lower is better)
Translates to: ANSEHTQRVSAIFLGKRERTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCAAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 3 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: HTQRVSAIFLGKREWQALIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 3 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGACCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 3 (lower is better)
Translates to: YESWIPPEELYKGLELDRPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR TCA 72 bp GTGGCTGTGGAAAGTGACGACGGGGCTGGATTGTTCTaGGGATACACCTGGAGCAATTTTCCAAAGACAGAA +
Preference number: 3 (lower is better)
Translates to: VAVESDDGAGLF*GYTWSNFPKTE
Trigger: TTCTGTCTTTGGAAAATTGCTCCAGGTGTATCCTCAGAACAATCCAGCCCCGTCGTCACTTTCCACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR CCA 72 bp AGAAATCTCAGAGCTGCCGAAGGCAGGTACCTTACTTaGGATTTACTATCCAACAGGGGTCCGAACTCAGCA +
Preference number: 3 (lower is better)
Translates to: RNLRAAEGRYLT*DLLSNRGPNSA
Trigger: TGCTGAGTTCGGACCCCTGTTGGATAGTAAATCCCAAGTAAGGTACCTGCCTTCGGCAGCTCTGAGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR CAA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGAGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 3 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 3 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 3 (lower is better)
Translates to: HTQRVSAIFLGKREWQALDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 3 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCAGATTCTACTGTCGATTaGAAAGCCATCTCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPDSTVD*KAISVG
Trigger: ACCCACTGAGATGGCTTTCAAATCGACAGTAGAATC...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR CAA 90 bp TGCCTTCCAGATGGGCAGGCAATGAAAAGCCAGAAAGCAAGAGCACTTCACCGCACTATGATAGGCATGTaGCTTCCATGTTATCCTTCC +
Preference number: 3 (lower is better)
Translates to: CLPDGQAMKSQKARALHRTMIGM*LPCYPS
Trigger: GGAAGGATAACATGGAAGCAACATGCCTATCATAGT...GCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 72 bp CTCAGTGAGTTAAAAATCTGGCCTTTAGGTGGTTTTTaGTATTCACTTCCCAACCCGTGGGCGGGAGAGGTC +
Preference number: 3 (lower is better)
Translates to: LSELKIWPLGGF*YSLPNPWAGEV
Trigger: GACCTCTCCCGCCCACGGGTTGGGAAGTGAATATCAAAAACCACCTAAAGGCCAGATTTTTAACTCACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR GCA 72 bp GCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTaGCATAGATGTAGTAGACATAAGTCTTTCCTTGGT +
Preference number: 3 (lower is better)
Translates to: AQDSPPHTPGGQ*HRCSRHKSFLG
Trigger: ACCAAGGAAAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CCA 72 bp AGCCCTAAGAGGTACTATTACAAGGCCCATTTTCTCTaGTCATGCACACTGTCTGTGAACATGGGACACCTC +
Preference number: 3 (lower is better)
Translates to: SPKRYYYKAHFL*SCTLSVNMGHL
Trigger: GAGGTGTCCCATGTTCACAGACAGTGTGCATGACCAGAGAAAATGGGCCTTGTAATAGTACCTCTTAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CAA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GTCCACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGCCAGAGGCAAAGTCCTaGCCATTTAAATTATTTCTC +
Preference number: 3 (lower is better)
Translates to: VHSLILDSLKVSRRYLQRPEAKS*PFKLFL
Trigger: GAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGG...CCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGCTCTTTCCACATATATaGCATGACGAGTTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKLFPHI*HDEFQP
Trigger: AGGCTGGAACTCGTCATGCAATATATGTGGAAAGAG...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 72 bp CTGGTTTTTCTGGAAGGACATGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAACAGTGAACACACTCAG +
Preference number: 3 (lower is better)
Translates to: LVFLEGHARVCM*LSNAANSEHTQ
Trigger: CTGAGTGTGTTCACTGTTGGCTGCATTGGACAATCACATACAAACCCTGGCATGTCCTTCCAGAAAAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp TTATCCTTCCTTCACAGCAGCCCTAAGAGGTACTATTACAAGGCCCATTTTCTTAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 3 (lower is better)
Translates to: LSFLHSSPKRYYYKAHFLKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...AAGAAAATGGGCCTTGTAATAGTACCTCTTAGGGCTGCTGTGAAGGAAGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR-3UTR CAA 90 bp GAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCACAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 3 (lower is better)
Translates to: EEAHQNQDRQREKAKSNHRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...GTGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR GCA 72 bp ATATATTGCATGACGAGTTCCAGCCTTGTCCAGAAATaGCAGGCCTTGAGAAAAGCTCACCTACTCTTCAAA +
Preference number: 3 (lower is better)
Translates to: IYCMTSSSLVQK*QALRKAHLLFK
Trigger: TTTGAAGAGTAGGTGAGCTTTTCTCAAGGCCTGGCATTTCTGGACAAGGCTGGAACTCGTCATGCAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR-3UTR CAA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGACCAGAGGCAAAGTCCTaGCCATTTAAATTATTTCTC +
Preference number: 3 (lower is better)
Translates to: YESWIPPEELYKGLELDRPEAKS*PFKLFL
Trigger: GAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGG...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
3UTR-3UTR CAA 90 bp GAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCACATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: EEAHQNQDRQREKAKSNHIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...GTGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR CCA 72 bp CAAAATCAAATCACACGCATCATCGGGGCATTAACTTaGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTA +
Preference number: 3 (lower is better)
Translates to: QNQITRIIGALT*RPEAKSLPFKL
Trigger: TAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGATTTGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
3UTR-3UTR CAA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: RYLCVSLNISVILRSSRGKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000420394.5
3UTR TCA 72 bp GGGTGTATTGTCGATATGCACAAATGCCTCGTGATTTaGATTATACTTGAGATGGTGCCAAAAAGATTCAGG +
Preference number: 3 (lower is better)
Translates to: GCIVDMHKCLVI*IILEMVPKRFR
Trigger: CCTGAATCTTTTTGGCACCATCTCAAGTATAATTCAAATCACGAGGCATTTGTGCATATCGACAATACACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR TCA 72 bp ACGATGGGTGTATTGTCGATATGCACAAATGCCTCGTaGTTTGAATTATACTTGAGATGGTGCCAAAAAGAT +
Preference number: 3 (lower is better)
Translates to: TMGVLSICTNAS*FELYLRWCQKD
Trigger: ATCTTTTTGGCACCATCTCAAGTATAATTCAAATCACGAGGCATTTGTGCATATCGACAATACACCCATCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR CCA 72 bp ATAAATACACTAAAGGATAGGATTTACAAAATGCAATaGCCCAGTGTTTGCAAAGCTGTGAGCAGTGATGAA +
Preference number: 3 (lower is better)
Translates to: INTLKDRIYKMQ*PSVCKAVSSDE
Trigger: TTCATCACTGCTCACAGCTTTGCAAACACTGGGCCATTGCATTTTGTAAATCCTATCCTTTAGTGTATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR GCA 72 bp AAGGATAGGATTTACAAAATGCAATGGCCCAGTGTTTaGAAAGCTGTGAGCAGTGATGAAATTTTGTTTATT +
Preference number: 3 (lower is better)
Translates to: KDRIYKMQWPSV*KAVSSDEILFI
Trigger: AATAAACAAAATTTCATCACTGCTCACAGCTTTGCAAACACTGGGCCATTGCATTTTGTAAATCCTATCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCCTCCTGGGGCCTCCCTaGGGCCTCCAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGLLGPP*GLQRWE
Trigger: TTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAG...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGATGGTCTGGCGCTGCTaGAGGACGCGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: TRAREAKAALCSAMPLWEMVWRC*RTRARE
Trigger: CTCCCGTGCCCGCGTCCTGCAGCAGCGCCAGACCAT...CTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGGCAAGAGAGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: TGGQGSAVLCNAPLGGKRGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...TCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: TRAREAKAALCSAMPLWEAWLCA*LRSRMG
Trigger: GCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGC...CTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: RTPRTADISGTAWLCAWLDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RTPRTADISGTAWLCAWLGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTATCTCCGGGACTGCTTaGCTTTGCGCTTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: AGRGHGRPRQRCALQCPSISGTA*LCAWLR
Trigger: GCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGAT...AGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGATCAGCTCAATGGTCTaGCGCTGCTGCAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: TRAREAKAALCSAMPLWEISSMV*RCCRTR
Trigger: CCGCGTCCTGCAGCAGCGCCAGACCATTGAGCTGAT...CTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCGGGGGATCAGCTCAATaGTCTGGCGCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CCRTRAREAKAALCSAMPGGSAQ*SGAAAG
Trigger: TCCTGCAGCAGCGCCAGACCATTGAGCTGATCCCCC...GGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCATCTTCGCCTGCCGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCCTCTCCCTGAGCAAGTaGTGCATCTTCGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ASSPAGPRAQLTSPGLLGLSLSK*CIFACR
Trigger: CCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAG...GCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCGGCAGGCGAAGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp GCATCTTCGCCTGCCGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ASSPAGPRAQLTSPGLLGRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...GCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCGGCAGGCGAAGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp CGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGGGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRTLNLDVPEPGGGASLRGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCAACCACGATGGAAGGTaGCACCAAAGCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGNHDGR*HQSFSN
Trigger: GTTGGAGAAGCTTTGGTGGCACCTTCCATCGTGGTT...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGCCTGGGGGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTATGGTCTGGCGCTGCTaGAGGACGCGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: SLGEAPLCGPSTEWLVKGMVWRC*RTRARE
Trigger: CTCCCGTGCCCGCGTCCTGCAGCAGCGCCAGACCAT...ACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGGAGAGGCGGGGGCTTCTaGGAAGGGCCTGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: RRTLNLDVPEPGGGASLRRGGGF*EGPVDS
Trigger: TGAGTCCACAGGCCCTTCCCAGAAGCCCCCGCCTCT...CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp TGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAAGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: WQALGTAMLCHTMVQPQQGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...TTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHEGQDL*SWGLPG
Trigger: CCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTC...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: GTATAIPLRIVHRIHLVVPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...GACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTGGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: LALARSSLGQLSRCSDTNPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...GTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RTPRTADISGTAWLCAWLASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGAGATGGGTTCCTGTTTaGCTTCCAGATGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TRAREAKAALCSAMPLWERWVPV*LPDGQA
Trigger: TGCCTGCCCATCTGGAAGGCAAACAGGAACCCATCT...CTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp CACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCTTCCCGACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: HRAAVAALRVHKAEEGFPTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...CGGGAAGCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTATVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: HTQRVSAIFLGKREWQALGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: QDAGTGGQGSAVLCNAPLSAMPL*EAREMS
Trigger: AGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGA...CAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATCCATCCGGGGGTCTCTaGCTCCCCTCCGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GRLWGQPCYVTRWYSHSNPSGGL*LPSAPA
Trigger: AGCAGGTGCGGAGGGGAGTCAGAGACCCCCGGATGG...ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420394.5
CDS-3UTR TCA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTGAGCAAGGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: ASSPPCRWRRSCSLSLSKASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...CTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCG +
Preference number: 4 (lower is better)
Translates to: RTPRTADISGTAWLCAWLLVPSP*ASAASS
Trigger: CGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR TCA 90 bp ACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGCAGATGGGCAGGCAATaGAAAGCCAGAAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TRAREAKAALCSAMPLWEQMGRQ*KARKQE
Trigger: CTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTG...CTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp TACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGATGACGAGGTCTCCAGCCACCCCAGCCTCCTCAACGTaGAGGCGAGAAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: YLQRVCRFSSWMTRSPATPASST*RRETEA
Trigger: GGCCTCAGTTTCTCGCCTGCACGTTGAGGAGGCTGG...GGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR GCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGATGTTCCAGACGTCCTaGCAAAGAGATGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QDAGTGGQGSAVLCNAPLMFQTS*QRDVCP
Trigger: AGGGCAGACATCTCTTTGGCAGGACGTCTGGAACAT...CAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR GCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCGCCGGGGGCTGCCCGTaGTTCTGTGTGTCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTAAGGCP*FCVSAH
Trigger: GTGAGCAGACACACAGAAGCACGGGCAGCCCCCGGC...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATAGCCCCTACCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: AGSGDSHAMSHDGTATAIAPTFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGGTAGGGGC...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp GAAACTGAGGCCACGGTAGTGGTAAAGCCCTCAGCAGTCCAACTGGGGAGGGCACTCCTGGGGCCTCCCTaGGGCCTCCAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ETEATVVVKPSAVQLGRALLGPP*GLQRWE
Trigger: TTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAG...TGCCCTCCCCAGTTGGACTGCTGAGGGCTTTACCACTACCGTGGCCTCAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp GCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTGAGCAAGGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: ASSPPCRWRRSCSLSLSKAWLCA*LRSRMG
Trigger: GCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGC...CTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp TCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: SLKVSRRYLQRVCRFSSWASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...CCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: PRGSRCTCTAHAHGICGIAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GRLWGQPCYVTRWYSHSNDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTAAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATAGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGSGDSHAMSHDGTATAIEGQDL*SWGLPG
Trigger: CCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTC...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCTTCCCGTCTCCAGGAGCTCTGTaGGGGGCGCCAGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: HRAAVAALRVHKAEEGFPSPGAL*GAPEDS
Trigger: AGAGTCCTCTGGCGCCCCCCACAGAGCTCCTGGAGA...CGGGAAGCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATCTGGGAAGGGCCTGTaGACTCACGCGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WQALGTAMLCHTMVQPQQSGKGL*THAGQP
Trigger: TGGCTGGCCCGCGTGAGTCCACAGGCCCTTCCCAGA...TTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGGCTCCGCAGCAGGATaGGCACCGCACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLGSAAG*APHRAR
Trigger: GCGGGCACGGTGCGGTGCCCATCCTGCTGCGGAGCC...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTAAWLCA*LRSRMG
Trigger: GCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGC...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: GGKRDVSQREVHDGVHHRAWLCA*LRSRMG
Trigger: GCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGC...TCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGTCTCCCCCTTGCAGGTaGCGCAGGTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLSPPCR*RRSCSL
Trigger: GAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGA...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: RTPRTADISGTAWLCAWLSAMPL*EAREMS
Trigger: AGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGA...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGGGGGGATCAGCTCAATaGTCTGGCGCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLGGSAQ*SGAAAG
Trigger: TCCTGCAGCAGCGCCAGACCATTGAGCTGATCCCCC...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAATGGCCCCTCCGCCCTaGCTCACCTGCTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSMAPPP*LTCCRT
Trigger: CGTCCTGCAGCAGGTGAGCCAGGGCGGAGGGGCCAT...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR TCA 90 bp GGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: GTATAIPLRIVHRIHLVVAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...GACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: MAGSGDSHAMSHDGTATAAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCATCTTCGCCTGCCGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCCTTATCAGCACAGACTaGGACACACGCAGACTCATT +
Preference number: 4 (lower is better)
Translates to: ASSPAGPRAQLTSPGLLGLISTD*DTRRLI
Trigger: AATGAGTCTGCGTGTGTCTCAGTCTGTGCTGATAAG...GCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCGGCAGGCGAAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR GCA 90 bp CACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCTTCCCGACTCCCCTCCGCACCTaGTTAGCAGTGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HRAAVAALRVHKAEEGFPTPLRT*LAVPAS
Trigger: ACTGGCTGGCACTGCTAAGCAGGTGCGGAGGGGAGT...CGGGAAGCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420394.5
CDS-3UTR GCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGEGQDL*SWGLPG
Trigger: CCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTC...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGCCTGGGGGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SLGEAPLCGPSTEWLVKGYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...ACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTATAIPLRIVHRIHLVVGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...GACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRLWGQPCYVTRWYSHSNGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MAGSGDSHAMSHDGTATAGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCTGCATCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQCCIFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCA...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: PRGSRCTCTAHAHGICGIGQLSR*SDTNSN
Trigger: GTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCC...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TCCAGCCACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SSHRAAVAALRVHKAEEGRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...GCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGTTTTCATCATGGTCTGGCGCTGCTaGAGGACGCGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: RDVSQREVHDGVHHRVFIMVWRC*RTRARE
Trigger: CTCCCGTGCCCGCGTCCTGCAGCAGCGCCAGACCAT...GATGAAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GGGGGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGGGTTGGAAGAATCTaGTGGAGGCCGGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GGGASLRPIHRVVSKGLKWVGRI*WRPGAA
Trigger: GGCAGCCCCCGGCCTCCAGCAGATTCTTCCAACCCA...TTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCGCGGTGCTGGGGAGATaGCCCTACCTTCGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGAVLGR*PYLRLP
Trigger: CGGCAGGCGAAGGTAGGGGCATCTCCCCAGCACCGC...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGCTCCTGGGGCCTCCCTaGGGCCTCCAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HTQRVSAIFLGKREWQALLLGPP*GLQRWE
Trigger: TTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAG...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCACTCCTGGGGCCTCCCTaGGGCCTCCAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSLLGPP*GLQRWE
Trigger: TTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAG...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCATCTCCGGGACTGCTTaGCTTTGCGCTTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLISGTA*LCAWLR
Trigger: GCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGAT...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGGCAAGAGAATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TGGQGSAVLCNAPLGGKRICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...TCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: AANSEHTQRVSAIFLGKRDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...ACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGGGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: RRTLNLDVPEPGGGASLRARVCM*LSNAAN
Trigger: GTTGGCTGCATTGGACAATCACATACAAACCCTGGC...CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTTGCGGTCTCAGTGGGTGGAATaGGCATCCCTTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RRTLNLDVPEPGGGASLRSQWVE*ASLLLL
Trigger: CAGAAGAAGAAGGGATGCTCATTCCACCCACTGAGA...CCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR GCA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCAGAATATCTGTCCTCTaGCCCCTTGAAGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RTPRTADISGTAWLCAWLRISVL*PLEEAS
Trigger: ACTGGCTTCTTCAAGGGGGCAGAGGACAGATATTCT...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREEGQDL*SWGLPG
Trigger: CCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTC...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCTCATCGCAGGGACTCTaGAGGGGACCGAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTASSQGL*RGPNRE
Trigger: CTCTCTGTTCGGTCCCCTGCAGAGTCCCTGCGATGA...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR GCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGCTGCATCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRCCIFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCA...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTAASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATAGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AGSGDSHAMSHDGTATAIAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGATGGTCTGGCGCTGCTaGAGGACGCGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQMVWRC*RTRARE
Trigger: CTCCCGTGCCCGCGTCCTGCAGCAGCGCCAGACCAT...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCTTGTTTTCTTCTAGCTaGACTGCACAAAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: CCRTRAREAKAALCSAMPLFSSS*TAQRRE
Trigger: TTCCCTCCTTTGTGCAGTGCAGCTAGAAGAAAACAA...GGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTCTCCTGGGGCCTCCCTaGGGCCTCCAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSLLGPP*GLQRWE
Trigger: TTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAG...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGATGCCGCTTCAGCTCCTaGATGACGAGGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRECRPSSLANVNGRLWGCRFSS*MTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCA...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQAWLCA*LRSRMG
Trigger: GCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGC...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGATCTCCGGGACTGCTTaGCTTTGCGCTTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGISGTA*LCAWLR
Trigger: GCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGAT...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGTCTCCCCCTTGCAGGTaGCGCAGGTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGSPPCR*RRSCSL
Trigger: GAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGA...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GCCTCTCAGAGCTACCGCAGGTGCCAAGCAGTGGCTGTGGAAAGTGACGACGGGGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: ASQSYRRCQAVAVESDDGEGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...CCCGTCGTCACTTTCCACAGCCACTGCTTGGCACCTGCGGTAGCTCTGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATGGGGGATCAGCTCAATaGTCTGGCGCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRLWGQPCYVTRWYSHSNGGSAQ*SGAAAG
Trigger: TCCTGCAGCAGCGCCAGACCATTGAGCTGATCCCCC...ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTC +
Preference number: 4 (lower is better)
Translates to: LKHRRTLNLDVPEPGGGAVNGRL*GQPCYV
Trigger: GACATAGCATGGCTGTCCCCAGAGCCTGCCATTCAC...GGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTGACGTCAGAGCCAGATaGCCCCTCCGCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQADVRAR*PLRPGS
Trigger: TGAGCCAGGGCGGAGGGGCCATCTGGCTCTGACGTC...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR CCA 90 bp CAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGACCCCTGGGGCGATGATATaGTCTGGATCTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: QPLHLYRPRPWHLWHSLTPGAMI*SGSVSP
Trigger: AGGGGACACAGATCCAGACCATATCATCGCCCCAGG...GGTCAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp TCCAGCCACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCCTACGTGCAGAGCTCTaGGGACACAGCAGTGACGAG +
Preference number: 4 (lower is better)
Translates to: SSHRAAVAALRVHKAEEGLRAEL*GHSSDE
Trigger: CTCGTCACTGCTGTGTCCCCAGAGCTCTGCACGTAG...GCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp TGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCTCACTTCCCAACCCGTaGGCGGGAGAGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: WEAREMSRRGKSTMGYTTSLPNP*AGEVSF
Trigger: AAAGGAGACCTCTCCCGCCCACGGGTTGGGAAGTGA...GGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGAGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCTTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTACACACAAAGTAGAGTaGTGGTTGACAGGGGCATAC +
Preference number: 4 (lower is better)
Translates to: PRGSRCTCTAHAHGICGITHKVE*WLTGAY
Trigger: GTATGCCCCTGTCAACCATCACTCTACTTTGTGTGT...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp TCCAGCCACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCGTCATCGCAGGGACTTaGAGTCTTTCTGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SSHRAAVAALRVHKAEEGVIAGT*SLSGPN
Trigger: GTTGGGGCCAGAAAGACTTCAAGTCCCTGCGATGAC...GCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR TCA 90 bp AGCCTGGGGGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTGGGGCTGGATTGTTCTaGGGATACACCTGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: SLGEAPLCGPSTEWLVKGGAGLF*GYTWSN
Trigger: ATTGCTCCAGGTGTATCCTCAGAACAATCCAGCCCC...ACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR TCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTAGG +
Preference number: 4 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHLVPSP*ASAASR
Trigger: CCTAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGTGCTGCATCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLCCIFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCA...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp CACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTGCTGCATCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: HTHHRGINLETRGKVLAICCIFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCA...AATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp TCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACCAAGACCGACAGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SDRQEAPTRRSTPEPRPTGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...TGTCGGTCTTGGTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp CTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRIVHRIHLVVSAIDVVDGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...GTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AANSEHTQRVSAIFLGKRAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...ACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQAAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAGCACTTCACCGCGGTaGTGGGGAGATGCCCCTACC +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGSTSPR*WGDAPT
Trigger: GGTAGGGGCATCTCCCCAGCACCGCGGTGAAGTGCT...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCTCTCCAGGAGCTCTGTaGGGGGCGCCAGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGSPGAL*GAPEDS
Trigger: AGAGTCCTCTGGCGCCCCCCACAGAGCTCCTGGAGA...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATCTCCAGGAGCTCTGTaGGGGGCGCCAGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRSPGAL*GAPEDS
Trigger: AGAGTCCTCTGGCGCCCCCCACAGAGCTCCTGGAGA...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGTCTGGGAAGGGCCTGTaGACTCACGCGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQSGKGL*THAGQP
Trigger: TGGCTGGCCCGCGTGAGTCCACAGGCCCTTCCCAGA...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACTACCGCCCACGCCCATaGCATTTGTGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHYRPRP*HLWHSL
Trigger: CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTA...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CCTCAATGGGCATGGGATCCAGTATTCATCCATCTACCATGCATCATCCGTCTGACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: PQWAWDPVFIHLPCIIRLTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...CAGACGGATGATGCATGGTAGATGGATGAATACTGGATCCCATGCCCATTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCTCTCCCCCTTGCAGGTaGCGCAGGTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTSPPCR*RRSCSL
Trigger: GAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGA...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GAAACTGAGGCCACGGTAGTGGTAAAGCCCTCAGCAGTCCAACTGGGGAGGGCAACGAGCGTGTTGTGTTaGTCAGCGGTGCCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: ETEATVVVKPSAVQLGRATSVLC*SAVPRN
Trigger: GTTCCTAGGCACCGCTGACCAACACAACACGCTCGT...TGCCCTCCCCAGTTGGACTGCTGAGGGCTTTACCACTACCGTGGCCTCAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR CAA 72 bp AACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NLDVPEPGGGAS*RPIHRVVSKGL
Trigger: CAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCCAGGCTCTGGGACATCAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CAA 72 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: ELPGVFLKHRRT*NLDVPEPGGGA
Trigger: GGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
3UTR CAA 72 bp AACAGCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAAGTGCTGCATCTTCGC +
Preference number: 4 (lower is better)
Translates to: NSFFSPLQVAQV*FPLPEQVLHLR
Trigger: GCGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
3UTR CAA 72 bp AACAGCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAAGTGCTGCATCTAGGC +
Preference number: 4 (lower is better)
Translates to: NSFFSPLQVAQV*FPLPEQVLHLG
Trigger: GCCTAGATGCAGCACTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGAGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LRECRPSSLANVNGRLWGAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCACTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCG +
Preference number: 4 (lower is better)
Translates to: MAGSGDSHAMSHDGTATALVPSP*ASAASS
Trigger: CGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR TCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCG +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGLVPSP*ASAASS
Trigger: CGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR TCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGSGDSHAMSHDGTATAILPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCACTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GTCTGGCGCTCTACGTCCTCATCCTTCCGCTCCGACGTTCTCAGGAAAGAGGGCGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: VWRSTSSSFRSDVLRKEGARVCM*LSNAAN
Trigger: GTTGGCTGCATTGGACAATCACATACAAACCCTGGC...GCCCTCTTTCCTGAGAACGTCGGAGCGGAAGGATGAGGACGTAGAGCGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR TCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCTCTCGGCCTCAAAACTaGGGTCCACCACACCATACA +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTASRPQN*GPPHHT
Trigger: TGTATGGTGTGGTGGACCTCAGTTTTGAGGCCGAGA...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415132.5
ENST00000435138.5
CDS-3UTR TCA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGTGGAGAGGCCAGAGATaGCTCCCCGGAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLWRGQR*LPGGSR
Trigger: CCTGCTTCCTCCGGGGAGTCATCTCTGGCCTCTCCA...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR TCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGCTCACATCAGTCCCCTaGCCCAAACCCTCAATGGGC +
Preference number: 4 (lower is better)
Translates to: HTQRVSAIFLGKREWQALLTSVP*PKPSMG
Trigger: GCCCATTGAGGGTTTGGGTCAGGGGACTGATGTGAG...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp TGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCCATGCACACTGTCTGTaGACATGGGACACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WEAREMSRRGKSTMGYTTHAHCL*TWDTSA
Trigger: TGCTGAGGTGTCCCATGTTCACAGACAGTGTGCATG...GGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCCAGCCTCCTCAACGTaGAGGCGAGAAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQAPASST*RRETEA
Trigger: GGCCTCAGTTTCTCGCCTGCACGTTGAGGAGGCTGG...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR GCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGTCATCGCAGGGACTCTaGAGGGGACCGAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: HTQRVSAIFLGKREWQALSSQGL*RGPNRE
Trigger: CTCTCTGTTCGGTCCCCTGCAGAGTCCCTGCGATGA...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR GCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GTTAAACATATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: VKHMSHGFHQRSCIRGWSPRGSR*TCTAHA
Trigger: GGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG...GCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATATGTTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTCTCTCCCTGAGCAAGTaGTGCATCTTCGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AANSEHTQRVSAIFLGKRLSLSK*CIFACR
Trigger: CCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAG...ACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTAGQLSR*SDTNSN
Trigger: GTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCC...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TCAAATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTATGGTCTGGCGCTGCTaGAGGACGCGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: SNHTHHRGINLETRGKVLMVWRC*RTRARE
Trigger: CTCCCGTGCCCGCGTCCTGCAGCAGCGCCAGACCAT...AAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCCCCTTGCATCTTCATaGATTTCTCCATGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHPLASS*ISPWQP
Trigger: GGGCTGCCATGGAGAAATGCATGAAGATGCAAGGGG...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR CCA 90 bp ATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATCTCCAGGAGCTCTGTaGGGGGCGCCAGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: ITRIIGALTWRPEAKSLPSPGAL*GAPEDS
Trigger: AGAGTCCTCTGGCGCCCCCCACAGAGCTCCTGGAGA...TGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCTCAGCAGTCCAACTaGGGAGGGCATCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGSGDSHAMSHDGTATAIPQQSN*GGHLLC
Trigger: ACACAGGAGATGCCCTCCCCAGTTGGACTGCTGAGG...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAAGAGGCGGGGGCTTCTaGGAAGGGCCTGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKRERGGGF*EGPVDS
Trigger: TGAGTCCACAGGCCCTTCCCAGAAGCCCCCGCCTCT...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGAGAGGCGGGGGCTTCTaGGAAGGGCCTGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLRGGGF*EGPVDS
Trigger: TGAGTCCACAGGCCCTTCCCAGAAGCCCCCGCCTCT...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACATCTCCGGGACTGCTTaGCTTTGCGCTTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SHDGTATAIPLRIVHRIHISGTA*LCAWLR
Trigger: GCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGAT...GTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GTCCACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGATCTCCGGGACTGCTTaGCTTTGCGCTTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VHSLILDSLKVSRRYLQRISGTA*LCAWLR
Trigger: GCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGAT...CCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCTCTCCCCCTTGCAGGTaGCGCAGGTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGSPPCR*RRSCSL
Trigger: GAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGA...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTTCTCCCCCTTGCAGGTaGCGCAGGTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQASPPCR*RRSCSL
Trigger: GAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGA...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCACATGATGACAAGCTaGATGAAGTGCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRGSRCTCTAHAHGICGIHMMTS*MKCNSF
Trigger: GAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHEGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCGGGGGATCAGCTCAATaGTCTGGCGCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGGGSAQ*SGAAAG
Trigger: TCCTGCAGCAGCGCCAGACCATTGAGCTGATCCCCC...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTC +
Preference number: 4 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCVNGRL*GQPCYV
Trigger: GACATAGCATGGCTGTCCCCAGAGCCTGCCATTCAC...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: HTQRVSAIFLGKREWQALLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCGCCCCTGGAGGACTGTaGGTATTAGGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTAAPGGL*VLGVQE
Trigger: TTCTTGGACACCTAATACCCACAGTCCTCCAGGGGC...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR CCA 90 bp GTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACAGCCAAGCAGTGGCTGTaGAAAGTGACGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VTRWYSHSNTAQDSPPHTAKQWL*KVTTGL
Trigger: CAGCCCCGTCGTCACTTTCCACAGCCACTGCTTGGC...TGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR TCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ACTTCTGTGAGGGGGATCAGCTCAATGGTCTGGCGCTCTACGTCCTCATCCTTCTTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: TSVRGISSMVWRSTSSSFLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...GAAGGATGAGGACGTAGAGCGCCAGACCATTGAGCTGATCCCCCTCACAGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR TCA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RVSAIFLGKREWQALGTAICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACCCAGCCTCCTCAACGTaGAGGCGAGAAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MQPTVNTLRECRPSSLANPASST*RRETEA
Trigger: GGCCTCAGTTTCTCGCCTGCACGTTGAGGAGGCTGG...GTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR GCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCTACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAACTCTCCCTGAGCAAGTaGTGCATCTTCGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKRELSLSK*CIFACR
Trigger: CCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAG...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGTTTTCATCGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RDVSQREVHDGVHHRVFIASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...GATGAAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTGGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: LALARSSLGQLSRCSDTNGQLSR*SDTNSN
Trigger: GTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCC...GTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: GTATAIPLRIVHRIHLVVGQLSR*SDTNSN
Trigger: GTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCC...GACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCCTCTGGGGACAGCCATaGTATGTCACACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: GTATAIPLRIVHRIHLVVLWGQP*YVTRWY
Trigger: GTACCATCGTGTGACATAGCATGGCTGTCCCCAGAG...GACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCATGTGTTGGTCAGCGGTaGCTAGGAACAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSCVGQR*LGTAAA
Trigger: AGCTGCTGCTGTTCCTAGGCACCGCTGACCAACACA...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR GCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAAGAGCACCTACTACGTaGAGAGCTCTGGGGACACAG +
Preference number: 4 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSRAPTT*RALGTQ
Trigger: CTGTGTCCCCAGAGCTCTGCACGTAGTAGGTGCTCT...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGAAGCCAGTCATAGCTaGGCAGTCTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HTQRVSAIFLGKREWQALEASHS*AVSPGA
Trigger: AGCTCCTGGAGAGACTGCCCAGCTATGACTGGCTTC...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACTGGGGCCTCCAAAGGTaGGAAGAATATCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGGKRDVSQREVHDGVHHWGLQR*EEYLSS
Trigger: AGAGGACAGATATTCTTCCCACCTTTGGAGGCCCCA...GTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTCCTCAGCAGTCCAACTaGGGAGGGCATCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AANSEHTQRVSAIFLGKRPQQSN*GGHLLC
Trigger: ACACAGGAGATGCCCTCCCCAGTTGGACTGCTGAGG...ACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGTCTGGGAAGGGCCTGTaGACTCACGCGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLSGKGL*THAGQP
Trigger: TGGCTGGCCCGCGTGAGTCCACAGGCCCTTCCCAGA...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp TCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACCAAGACCGACATGCCGCTTCAGCTCCTaGATGACGAGGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SDRQEAPTRRSTPEPRPTCRFSS*MTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCA...TGTCGGTCTTGGTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCATGCCGCTTCAGCTCCTaGATGACGAGGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPCRFSS*MTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCA...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATCGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GRLWGQPCYVTRWYSHSNRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: IVHRIHLVVSAIDVVDISTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...ACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACCAAGACCGACATCTCCCCCTTGCAGGTaGCGCAGGTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SDRQEAPTRRSTPEPRPTSPPCR*RRSCSL
Trigger: GAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGA...TGTCGGTCTTGGTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGEGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 4 (lower is better)
Translates to: RTPRTADISGTAWLCAWLSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGATCAGCTCAATGGTCTaGCGCTCTACGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGISSMV*RSTSSS
Trigger: GGATGAGGACGTAGAGCGCCAGACCATTGAGCTGAT...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR CCA 90 bp CCAATAGTGAACTTCTGTGAGGGGGATCAGCTCAATGGTCTGGCGCTCTACGTCGGGGGATCAGCTCAATaGTCTGGCGCTCTACGTCCT +
Preference number: 4 (lower is better)
Translates to: PIVNFCEGDQLNGLALYVGGSAQ*SGALRP
Trigger: AGGACGTAGAGCGCCAGACCATTGAGCTGATCCCCC...GACGTAGAGCGCCAGACCATTGAGCTGATCCCCCTCACAGAAGTTCACTATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR CCA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCATCTTTCCAGCTGGGTTaGAAGAATCTGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: MAGSGDSHAMSHDGTATASFQLG*KNLLEA
Trigger: GGCCTCCAGCAGATTCTTCCAACCCAGCTGGAAAGA...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp TCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACCAAGACCGACACAGTGCCAGCCAGTGTaGGCTGTTCTACAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SDRQEAPTRRSTPEPRPTQCQPV*AVLQRV
Trigger: GACACGCTGTAGAACAGCTCACACTGGCTGGCACTG...TGTCGGTCTTGGTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341795.7
CDS-3UTR TCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGGCTTCAGCTCCTGGATaGCGAGGTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKASAPG*RGLQPP
Trigger: CGGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGC...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCTTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp TCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: SHDGTATAIPLRIVHRIHAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...GTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGARVCM*LSNAAN
Trigger: GTTGGCTGCATTGGACAATCACATACAAACCCTGGC...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATCTCGGCCTCAAAACTaGGGTCCACCACACCACGAT +
Preference number: 4 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRSRPQN*GPPHHD
Trigger: ATCGTGGTGTGGTGGACCTCAGTTTTGAGGCCGAGA...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp GCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCGGTGAGAAGACTGCTTaGGCCCAGAAGATCAAGACC +
Preference number: 4 (lower is better)
Translates to: AMSHDGTATAIPLRIVHRGEKTA*AQKIKT
Trigger: GGTCTTGATCTTCTGGGCTCAAGCAGTCTTCTCACC...GCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR TCA 90 bp CACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCTTCCCGTCAACCAACTTTCCTTaGCTCCTCCTCCATTCAGAC +
Preference number: 4 (lower is better)
Translates to: HRAAVAALRVHKAEEGFPSTNFP*LLLHSD
Trigger: GTCTGAATGGAGGAGGAGTCAAGGAAAGTTGGTTGA...CGGGAAGCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp CATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACTACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: HAMSHDGTATAIPLRIVHYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...GTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTGGGGAGGCGCCTCTTTaGGGCCCATCCACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: IVHRIHLVVSAIDVVDISGEAPL*GPSTEW
Trigger: CCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCC...ACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGTGCTGCATCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKCCIFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCA...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: IVHRIHLVVSAIDVVDISGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...ACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TCCAGCCACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCCAATGGCCCAGTGTTTaGAAAGCTGTGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SSHRAAVAALRVHKAEEGQWPSV*KAVSSD
Trigger: ATCACTGCTCACAGCTTTGCAAACACTGGGCCATTG...GCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp AGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGTTTTCATCGAAGCCAGTCATAGCTaGGCAGTCTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RDVSQREVHDGVHHRVFIEASHS*AVSPGA
Trigger: AGCTCCTGGAGAGACTGCCCAGCTATGACTGGCTTC...GATGAAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGATGGGGCCTCCAAAGGTaGGAAGAATATCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRECRPSSLANVNGRLWGWGLQR*EEYLSS
Trigger: AGAGGACAGATATTCTTCCCACCTTTGGAGGCCCCA...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCATGGGGCCTCCAAAGGTaGGAAGAATATCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: MAGSGDSHAMSHDGTATAWGLQR*EEYLSS
Trigger: AGAGGACAGATATTCTTCCCACCTTTGGAGGCCCCA...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTCCTGGGGCCTCCCTaGGGCCTCCAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKLLGPP*GLQRWE
Trigger: TTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAG...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACATACCGCCCACGCCCATaGCATTTGTGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: VTRWYSHSNTAQDSPPHTYRPRP*HLWHSL
Trigger: CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTA...TGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGTCCCATCTCCCCCTTGCAGGTaGCGCAGGTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: ELPGVFLKHRRTLNLDVPSPPCR*RRSCSL
Trigger: GAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGA...TGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTATCAGCTCAATGGTCTaGCGCTGCTGCAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLISSMV*RCCRTR
Trigger: CCGCGTCCTGCAGCAGCGCCAGACCATTGAGCTGAT...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAGGACACACAGGTAACTaGAGGACTGTGGGTATTAGG +
Preference number: 4 (lower is better)
Translates to: MAGSGDSHAMSHDGTATAGHTGN*RTVGIR
Trigger: CCTAATACCCACAGTCCTCCAGTTACCTGTGTGTCC...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGCAAAGCTTCTCCAACTaGCTTGTCAGAAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGQSFSN*LVRRMA
Trigger: GGCCATCCTTCTGACAAGCCAGTTGGAGAAGCTTTG...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGACCATCCGGGGGTCTCTaGCTCCCCTCCGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGPSGGL*LPSAPA
Trigger: AGCAGGTGCGGAGGGGAGTCAGAGACCCCCGGATGG...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341795.7
ENST00000420394.5
CDS-3UTR TCA 90 bp TCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACCAAGACCGACAGTGCAGGCGAGAAACTaGGGCCACGGTAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SDRQEAPTRRSTPEPRPTVQARN*GHGSGK
Trigger: TTTACCACTACCGTGGCCTCAGTTTCTCGCCTGCAC...TGTCGGTCTTGGTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341795.7
CDS-3UTR TCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGAAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGTTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTGCATTCCTTGACCAGTaGCGAGTGAGGGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: HTHHRGINLETRGKVLAIAFLDQ*RVRDLE
Trigger: TTCCAGGTCCCTCACTCGTCACTGGTCAAGGAATGC...AATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCG +
Preference number: 4 (lower is better)
Translates to: MQPTVNTLRECRPSSLANLVPSP*ASAASS
Trigger: CGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...GTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR TCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAACTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCG +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKRELVPSP*ASAASS
Trigger: CGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR TCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTCTCGGCCTCAAAACTaGGGTCCACCACACCACGAT +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSSRPQN*GPPHHD
Trigger: ATCGTGGTGTGGTGGACCTCAGTTTTGAGGCCGAGA...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR TCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATCTCGGCCTCAAAACTaGGGTCCACCACACTGTCAT +
Preference number: 4 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRSRPQN*GPPHCH
Trigger: ATGACAGTGTGGTGGACCTCAGTTTTGAGGCCGAGA...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR TCA 90 bp CCTCAATGGGCATGGGATCCAGTATTCATCCATCTACCATGCATCATCCGTCTGCTGGGGACACAGCAGTaGCGAGACAGATGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PQWAWDPVFIHLPCIIRLLGTQQ*RDRWVP
Trigger: AGGAACCCATCTGTCTCGTCACTGCTGTGTCCCCAG...CAGACGGATGATGCATGGTAGATGGATGAATACTGGATCCCATGCCCATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp TCAAATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTACTCCCCTCCGCACCTaGTTAGCAGTGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SNHTHHRGINLETRGKVLTPLRT*LAVPAS
Trigger: ACTGGCTGGCACTGCTAAGCAGGTGCGGAGGGGAGT...AAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341795.7
ENST00000420394.5
CDS-3UTR GCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGAGAATATCTGTCCTCTaGCCCCTTGAAGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGRISVL*PLEEAS
Trigger: ACTGGCTTCTTCAAGGGGGCAGAGGACAGATATTCT...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTATCCTTCCTTCACAGCAGCCCTAAGAGGTACTATTACAAGGCCCATTTTCTTGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSFLHSSPKRYYYKAHFLEGQDL*SWGLPG
Trigger: CCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTC...AAGAAAATGGGCCTTGTAATAGTACCTCTTAGGGCTGCTGTGAAGGAAGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR GCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGCTCTCCCTGAGCAAGTaGTGCATCTTCGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLLSLSK*CIFACR
Trigger: CCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAG...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR GCA 90 bp TCCTTCACAGCAGCCCTAAGAGGTACTATTACAAGGCCCATTTTCTCTGGTCATGCCAAGGCAGCGCTGTaGTCTGCAATGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SFTAALRGTITRPIFSGHAKAAL*SAMPLW
Trigger: CCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGC...ATGACCAGAGAAAATGGGCCTTGTAATAGTACCTCTTAGGGCTGCTGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp GAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCACATGGTCTGGCGCTGCTaGAGGACGCGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: EEAHQNQDRQREKAKSNHMVWRC*RTRARE
Trigger: CTCCCGTGCCCGCGTCCTGCAGCAGCGCCAGACCAT...GTGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp GTCCACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGCTCTGGGGACAGCCATaGTATGTCACACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: VHSLILDSLKVSRRYLQRLWGQP*YVTRWY
Trigger: GTACCATCGTGTGACATAGCATGGCTGTCCCCAGAG...CCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTGAGCAAGCATTTTCTCTGGTCATaGACACTGTCTGTGAACATG +
Preference number: 4 (lower is better)
Translates to: ASSPPCRWRRSCSLSLSKHFLWS*TLSVNM
Trigger: CATGTTCACAGACAGTGTGCATGACCAGAGAAAATG...CTTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGAAGCCTTGTCCAGAAATaGCAGGCCTTGAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRECRPSSLANVNGRLWGSLVQK*QALRKA
Trigger: AGCTTTTCTCAAGGCCTGGCATTTCTGGACAAGGCT...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAGAAGCCAGTCATAGCTaGGCAGTCTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREEASHS*AVSPGA
Trigger: AGCTCCTGGAGAGACTGCCCAGCTATGACTGGCTTC...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGAAGCCAGTCATAGCTaGGCAGTCTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQEASHS*AVSPGA
Trigger: AGCTCCTGGAGAGACTGCCCAGCTATGACTGGCTTC...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CACAGAGTGGTTAGTAAAGGGTTGAAATGTCCACTCGCTTATCCTGGATTCACTTCTGGGAAGGGCCTGTaGACTCACGCGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HRVVSKGLKCPLAYPGFTSGKGL*THAGQP
Trigger: TGGCTGGCCCGCGTGAGTCCACAGGCCCTTCCCAGA...AGTGAATCCAGGATAAGCGAGTGGACATTTCAACCCTTTACTAACCACTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGAAGAGGCGGGGGCTTCTaGGAAGGGCCTGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: YESWIPPEELYKGLELDRRGGGF*EGPVDS
Trigger: TGAGTCCACAGGCCCTTCCCAGAAGCCCCCGCCTCT...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGACGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATACCGCCCACGCCCATaGCATTTGTGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: ITRIIGALTWRPEAKSLPYRPRP*HLWHSL
Trigger: CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTA...TGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGTACCGCCCACGCCCATaGCATTTGTGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLYRPRP*HLWHSL
Trigger: CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTA...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVAWLCA*LRSRMG
Trigger: GCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGC...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGATCTCCGGGACTGCTTaGCTTTGCGCTTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKISGTA*LCAWLR
Trigger: GCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGAT...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSEGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: AANSEHTQRVSAIFLGKREGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...ACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGATCAGCTCAATGGTCTaGCGCTGCTGCAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLISSMV*RCCRTR
Trigger: CCGCGTCCTGCAGCAGCGCCAGACCATTGAGCTGAT...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTC +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQVNGRL*GQPCYV
Trigger: GACATAGCATGGCTGTCCCCAGAGCCTGCCATTCAC...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAGGCGATGATATGGTCTaGATCTGTGTCCCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: MAGSGDSHAMSHDGTATAGDDMV*ICVPSK
Trigger: TTTAGAGGGGACACAGATCCAGACCATATCATCGCC...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp CACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCTTCCCGAACCCTCAATGGGCATaGGATCCAGTATTCATCCAT +
Preference number: 4 (lower is better)
Translates to: HRAAVAALRVHKAEEGFPNPQWA*DPVFIH
Trigger: ATGGATGAATACTGGATCCCATGCCCATTGAGGGTT...CGGGAAGCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGACCCAAACCCTCAATaGGCATGGGATCCAGTATTC +
Preference number: 4 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTDPNPQ*AWDPVF
Trigger: GAATACTGGATCCCATGCCCATTGAGGGTTTGGGTC...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp TTGGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCATGTCTTTCCAGCTaGGTTGGAAGAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LALARSSLGQLSRCSDTNSCLSS*VGRICW
Trigger: CCAGCAGATTCTTCCAACCCAGCTGGAAAGACATGA...GTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp CTCAGCAGAGGGGGCCTTTCAGAGTTAGAGAATTCCCAAGTCCATATCATGTCTACTTCACCGCGGTGCTaGGGAGATGCCCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: LSRGGLSELENSQVHIMSTSPRC*GDAPTF
Trigger: GAAGGTAGGGGCATCTCCCCAGCACCGCGGTGAAGT...AGACATGATATGGACTTGGGAATTCTCTAACTCTGAAAGGCCCCCTCTGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp CTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRIVHRIHLVVSAIDVVDNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...GTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AANSEHTQRVSAIFLGKRICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...ACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCACGACCCCGCGCACAGCTaGCATCTCCGGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: EEAHQNQDRQREKAKSNHDPAHS*HLRDCL
Trigger: CAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTC...GTGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTCTTGTTCCCTCTCCCTaGGCAAGTGCTGCATCTTCG +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLLVPSP*ASAASS
Trigger: CGAAGATGCAGCACTTGCTCAGGGAGAGGGAACAAG...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
CDS-3UTR TCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp CAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGACCTGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: QPLHLYRPRPWHLWHSLTCRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...GGTCAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGTTGGGATTTACTATCTaGCAGGGGTGGGAACGCAGC +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQLGFTI*QGWERS
Trigger: GCTGCGTTCCCACCCCTGTCAGATAGTAAATCCCAA...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR TCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGAGAAATGCCAGGCCTTaGGAAAAGCTCACCTACTCT +
Preference number: 4 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQRNARP*EKLTYS
Trigger: AGAGTAGGTGAGCTTTTCTCAAGGCCTGGCATTTCT...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp GGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATCCTTTAGGTGGTTTTTaGTATTCACTTCCCAACCCG +
Preference number: 4 (lower is better)
Translates to: GRLWGQPCYVTRWYSHSNPLGGF*YSLPNP
Trigger: CGGGTTGGGAAGTGAATATCAAAAACCACCTAAAGG...ATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp GGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACTCGGAACTGATCCTCAGTaGGTTAAAAATCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GFSKELPGAVEPVLRHKLGTDPQ*VKNLAF
Trigger: AAAGGCCAGATTTTTAACTCACTGAGGATCAGTTCC...GAGTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGACCAGCCTCCTCAACGTaGAGGCGAGAAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: YESWIPPEELYKGLELDRPASST*RRETEA
Trigger: GGCCTCAGTTTCTCGCCTGCACGTTGAGGAGGCTGG...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR GCA 90 bp TCAAATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTTCATCGCAGGGACTCTaGAGGGGACCGAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: SNHTHHRGINLETRGKVLSSQGL*RGPNRE
Trigger: CTCTCTGTTCGGTCCCCTGCAGAGTCCCTGCGATGA...AAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341795.7
CDS-3UTR GCA 90 bp CACATATATTGCATGACGAGTTCCAGCCTTGTCCAGAAATGCCAGGCCTTGAGATACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: HIYCMTSSSLVQKCQALRYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...TCTCAAGGCCTGGCATTTCTGGACAAGGCTGGAACTCGTCATGCAATATATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp CTCAGCAGAGGGGGCCTTTCAGAGTTAGAGAATTCCCAAGTCCATATCATGTCTGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSRGGLSELENSQVHIMSASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...AGACATGATATGGACTTGGGAATTCTCTAACTCTGAAAGGCCCCCTCTGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGGCAGCGCTGTGCTCTaGAATGCCCCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGGSAVL*NAPLGG
Trigger: GCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGTAATAGCATCCTCTTaGCCCTGGAGGACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQVIASS*PWRTVG
Trigger: ACCCACAGTCCTCCAGGGGCAAGAGGATGCTATTAC...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR GCA 90 bp TACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGATGACGAGGTCTCCAGCCACCATTAATCCACAATTCTaGACACTTGTATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: YLQRVCRFSSWMTRSPATINPQF*TLVSPA
Trigger: TGCTGGAGATACAAGTGTGCAGAATTGTGGATTAAT...GGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR GCA 90 bp GGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCGAGGGAACTGCTTTCTaGATTGGGACATCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: GTATAIPLRIVHRIHLVVEGTAF*IGTSVV
Trigger: TACTACTGATGTCCCAATGCAGAAAGCAGTTCCCTC...GACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTCCTGTGTTTCCTCCCTaGAGTGGCTCTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSPVFPP*SGSFFT
Trigger: TGTGAAGAAAGAGCCACTGCAGGGAGGAAACACAGG...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCTGGGGCCTCCAAAGGTaGGAAGAATATCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGWGLQR*EEYLSS
Trigger: AGAGGACAGATATTCTTCCCACCTTTGGAGGCCCCA...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTTGGGGCCTCCAAAGGTaGGAAGAATATCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQAWGLQR*EEYLSS
Trigger: AGAGGACAGATATTCTTCCCACCTTTGGAGGCCCCA...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTTGGGGCCTCCAAAGGTaGGAAGAATATCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSWGLQR*EEYLSS
Trigger: AGAGGACAGATATTCTTCCCACCTTTGGAGGCCCCA...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp ATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACCGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: MQPTVNTLRECRPSSLANRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...GTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCACATGATGACAAGCTaGATGAAGTGCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCHMMTS*MKCNSF
Trigger: GAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GTTAAACATATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCATCAGCTCAATGGTCTaGCGCTGCTGCAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: VKHMSHGFHQRSCIRGWSISSMV*RCCRTR
Trigger: CCGCGTCCTGCAGCAGCGCCAGACCATTGAGCTGAT...GCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATATGTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTATCAGCTCAATGGTCTaGCGCTGCTGCAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVISSMV*RCCRTR
Trigger: CCGCGTCCTGCAGCAGCGCCAGACCATTGAGCTGAT...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGATCAGCTCAATGGTCTaGCGCTGCTGCAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKISSMV*RCCRTR
Trigger: CCGCGTCCTGCAGCAGCGCCAGACCATTGAGCTGAT...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 4 (lower is better)
Translates to: YSHSNTAQDSPPHTPGGQCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...CTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATATGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 4 (lower is better)
Translates to: AGSGDSHAMSHDGTATAICYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTATCGGGGCATTAACTTaGAGACCAGAGGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCIGALT*RPEAKS
Trigger: GGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACTTCAGATCCATGGATaGCAGCACAAGAGACACTGT +
Preference number: 4 (lower is better)
Translates to: AGSGDSHAMSHDGTATAILQIHG*QHKRHC
Trigger: ACAGTGTCTCTTGTGCTGCCATCCATGGATCTGAAG...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR TCA 90 bp TGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: WQALGTAMLCHTMVQPQQWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...TTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCAATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ITRIIGALTWRPEAKSLPICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...TGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp GTTAAACATATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCCTTCCTTGGCAAACGTaGATGGCAGGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VKHMSHGFHQRSCIRGWSLPWQT*MAGSGD
Trigger: GTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAG...GCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATATGTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: MQPTVNTLRECRPSSLANARVCM*LSNAAN
Trigger: GTTGGCTGCATTGGACAATCACATACAAACCCTGGC...GTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTATCCCACAGGGGTCTaGACGCAGCCCAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVYPTGV*TQPRIR
Trigger: TCTGATCCTGGGCTGCGTTCAGACCCCTGTGGGATA...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR GCA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAGAATATCTGTCCTCTaGCCCCTTGAAGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGRISVL*PLEEAS
Trigger: ACTGGCTTCTTCAAGGGGGCAGAGGACAGATATTCT...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GTTAAACATATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTCATCGCAGGGACTCTaGAGGGGACCGAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: VKHMSHGFHQRSCIRGWSSSQGL*RGPNRE
Trigger: CTCTCTGTTCGGTCCCCTGCAGAGTCCCTGCGATGA...GCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATATGTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR GCA 90 bp TTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACTACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: FSNTQIVKRLPLEEAHQNYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...GTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: YESWIPPEELYKGLELDRYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCGCTGTGCTCTGCAATaGCCCTCTGGGAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFRCALQ*PSGRQE
Trigger: CTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCG...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCCCTCCTTCCTCCCCTTaGATCTTCATGCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSPPSSP*IFMHFS
Trigger: GGAGAAATGCATGAAGATGCAAGGGGAGGAAGGAGG...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR GCA 90 bp TGCCTTCCAGATGGGCAGGCAATGAAAAGCCAGAAAGCAAGAGCACTTCACCGCCACAAAGGAGGGAACTaGTTTCTGCATTGGGACATC +
Preference number: 4 (lower is better)
Translates to: CLPDGQAMKSQKARALHRHKGGN*FLHWDI
Trigger: GATGTCCCAATGCAGAAAGCAGTTCCCTCCTTTGTG...GCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCATGGGGCCTCCAAAGGTaGGAAGAATATCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPWGLQR*EEYLSS
Trigger: AGAGGACAGATATTCTTCCCACCTTTGGAGGCCCCA...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTCCTCAGCAGTCCAACTaGGGAGGGCATCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVPQQSN*GGHLLC
Trigger: ACACAGGAGATGCCCTCCCCAGTTGGACTGCTGAGG...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR CCA 90 bp TGGTCAAACTCACACACACAAAGTAGAGTGATGGTTGACAGGGGCATACACAAATGCCGCTTCAGCTCCTaGATGACGAGGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WSNSHTQSRVMVDRGIHKCRFSS*MTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCA...TTTGTGTATGCCCCTGTCAACCATCACTCTACTTTGTGTGTGTGAGTTTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTCGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGTACCGCCCACGCCCATaGCATTTGTGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLYRPRP*HLWHSL
Trigger: CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTA...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGCACATGATGACAAGCTaGATGAAGTGCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: HTQRVSAIFLGKREWQALHMMTS*MKCNSF
Trigger: GAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCCACATGATGACAAGCTaGATGAAGTGCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: AMSHDGTATAIPLRIVHRHMMTS*MKCNSF
Trigger: GAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG...GCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDSAMPL*EAREMS
Trigger: AGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGA...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTC +
Preference number: 4 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKVNGRL*GQPCYV
Trigger: GACATAGCATGGCTGTCCCCAGAGCCTGCCATTCAC...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTTGCACAAGAGACACTGTaGGCTGGAGAGGCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VHRIHLVVSAIDVVDISLAQETL*AGEARD
Trigger: ATCTCTGGCCTCTCCAGCCCACAGTGTCTCTTGTGC...AAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR CCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTGCAGGTGCCAAGCAGTaGCTGTGGAAAGTGACGACG +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVAGAKQ*LWKVTT
Trigger: CGTCGTCACTTTCCACAGCCACTGCTTGGCACCTGC...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp TGCCTTCCAGATGGGCAGGCAATGAAAAGCCAGAAAGCAAGAGCACTTCACCGCGCAGTAACGTTTTCCTaGAGGACTGTGGGTATTAGG +
Preference number: 4 (lower is better)
Translates to: CLPDGQAMKSQKARALHRAVTFS*RTVGIR
Trigger: CCTAATACCCACAGTCCTCCAGGAAAACGTTACTGC...GCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp GTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACAGTCAGAAGGATGGCCTaGGCTTTAATGAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VTRWYSHSNTAQDSPPHTVRRMA*ALMRQK
Trigger: CTTTTGCCTCATTAAAGCCCAGGCCATCCTTCTGAC...TGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTGTGCAGGCGAGAAACTaGGGCCACGGTAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVVQARN*GHGSGK
Trigger: TTTACCACTACCGTGGCCTCAGTTTCTCGCCTGCAC...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000415132.5
ENST00000435138.5
CDS-3UTR TCA 90 bp GTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTTAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VHRIHLVVSAIDVVDISLNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...AAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp TTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACTTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: FSNTQIVKRLPLEEAHQNLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...GTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGTGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGCRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTATTCTACTGTCGATTTaGAAGCCATCTCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSILLSI*KPSQWV
Trigger: CACCCACTGAGATGGCTTTCAAATCGACAGTAGAAT...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR TCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTAGTGGCTGTGGAAAGTaGCGACGGGGCTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVSGCGK*RRGWIV
Trigger: AACAATCCAGCCCCGTCGTCACTTTCCACAGCCACT...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR GCA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RYLCVSLNISVILRSSRGEGQDL*SWGLPG
Trigger: CCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTC...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTTACCTGCAGAGGGTCTaGCGCTTCAGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFYLQRV*RFSSWM
Trigger: CATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGAACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGATTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 4 (lower is better)
Translates to: LRECRPSSLANVNGRLWGFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCACTGCCGCTTCAGCTCCTaGATGACGAGGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EEAHQNQDRQREKAKSNHCRFSS*MTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCA...GTGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp TCCACCACACCACGATGGGTGTATTGTCGATATGCACAAATGCCTCGTGATTTGCGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: STTPRWVYCRYAQMPRDLRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...CAAATCACGAGGCATTTGTGCATATCGACAATACACCCATCGTGGTGTGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: RYLCVSLNISVILRSSRGTVPAP*QPLHLY
Trigger: GTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGT...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp TGCCTTCCAGATGGGCAGGCAATGAAAAGCCAGAAAGCAAGAGCACTTCACCGCCACATGATGACAAGCTaGATGAAGTGCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: CLPDGQAMKSQKARALHRHMMTS*MKCNSF
Trigger: GAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG...GCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLSAMPL*EAREMS
Trigger: AGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGA...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKSAMPL*EAREMS
Trigger: AGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGA...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCATGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 4 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GTTAAACATATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTC +
Preference number: 4 (lower is better)
Translates to: VKHMSHGFHQRSCIRGWSVNGRL*GQPCYV
Trigger: GACATAGCATGGCTGTCCCCAGAGCCTGCCATTCAC...GCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATATGTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GAACATTTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCTTGGCAAACGTGAATaGCAGGCTCTGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: EHFSNTQIVKRLPLEEAHLGKRE*QALGTA
Trigger: GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAG...GTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAAATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp ATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACTCCACCACACCACGATaGGTGTATTGTCGATATGCA +
Preference number: 4 (lower is better)
Translates to: MQPTVNTLRECRPSSLANSTTPR*VYCRYA
Trigger: TGCATATCGACAATACACCCATCGTGGTGTGGTGGA...GTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR CCA 90 bp CATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCTGTCTTCAGATCCATaGATGGCAGCACAAGAGACA +
Preference number: 4 (lower is better)
Translates to: HAMSHDGTATAIPLRIVHLSSDP*MAAQET
Trigger: TGTCTCTTGTGCTGCCATCCATGGATCTGAAGACAG...GTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR CCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTGTAACTGGAGGACTGTaGGTATTAGGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQAVTGGL*VLGVQE
Trigger: TTCTTGGACACCTAATACCCACAGTCCTCCAGTTAC...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
3UTR CAA 72 bp AAGAAATCTCAGAGCTGCCGAAGGCAGGTACCTTACTaGGGATTTACTATCCAACAGGGGTCCGAACTCAGC +
Preference number: 4 (lower is better)
Translates to: KKSQSCRRQVPY*GFTIQQGSELS
Trigger: GCTGAGTTCGGACCCCTGTTGGATAGTAAATCCCAAGTAAGGTACCTGCCTTCGGCAGCTCTGAGATTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR TCA 90 bp TGCCTTCCAGATGGGCAGGCAATGAAAAGCCAGAAAGCAAGAGCACTTCACCGCTGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: CLPDGQAMKSQKARALHRWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...GCGGTGAAGTGCTCTTGCTTTCTGGCTTTTCATTGCCTGCCCATCTGGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGAAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YESWIPPEELYKGLELDRNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GAACATTTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACTTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: EHFSNTQIVKRLPLEEAHLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...GTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAAATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp GATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DSPPHTPGGQCHRCSRHKICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...CTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLARVCM*LSNAAN
Trigger: GTTGGCTGCATTGGACAATCACATACAAACCCTGGC...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATATGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: AGSGDSHAMSHDGTATAICRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AACCCAACCTTGAGTATTTTTACTCCTCACGGTTTCCTGTTTCCCTTAAAAAGTGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NPTLSIFTPHGFLFPLKSGTAWL*AWLRSR
Trigger: CCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCC...ACTTTTTAAGGGAAACAGGAAACCGTGAGGAGTAAAAATACTCAAGGTTGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp ACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTGTTTGCTGCATCTTCGCCTaGCGGACCCCGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: TWRPEAKSLPFKLFLSFVCCIFA*RTPRTA
Trigger: AGCTGTGCGCGGGGTCCGGCAGGCGAAGATGCAGCA...AACAAATGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVGQLSR*SDTNSN
Trigger: GTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCC...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCAACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTCTCTGGGGACAGCCATaGTATGTCACACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVLWGQP*YVTRWY
Trigger: GTACCATCGTGTGACATAGCATGGCTGTCCCCAGAG...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTCTGGGGACAGCCATaGTATGTCACACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKLWGQP*YVTRWY
Trigger: GTACCATCGTGTGACATAGCATGGCTGTCCCCAGAG...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTAAGAAAGCTCAGAGCTaGCGAAAGCAGGTACCTTAC +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLKKAQS*RKQVPY
Trigger: GTAAGGTACCTGCTTTCGGCAGCTCTGAGCTTTCTT...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR GCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGAAGAAAGCTCAGATCTaGGGAAGGCAAGTACCTTAC +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQKKAQI*GRQVPY
Trigger: GTAAGGTACTTGCCTTCCGCAGATCTGAGCTTTCTT...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR GCA 90 bp GGGGGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAACAAAGACAGAATATGTaGTGGATTCTACTGTCGATT +
Preference number: 4 (lower is better)
Translates to: GGGASLRPIHRVVSKGLKQRQNM*WILLSI
Trigger: AATCGACAGTAGAATCCAGCACATATTCTGTCTTTG...TTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR GCA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCTCTTTCCACATATATTaGATGACGAGTTCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTSFHIY*MTSSSL
Trigger: AAGGCTGGAACTCGTCATGCAATATATGTGGAAAGA...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp ACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTGTTCTCCTGGGGCCTCCCTaGGGCCTCCAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TWRPEAKSLPFKLFLSFVLLGPP*GLQRWE
Trigger: TTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAG...AACAAATGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp TACAAGGCCCATTTTCTTAACAAGGATTTCCCAACAACTGGTTTCCATAGGTACTGCCGCTTCAGCTCCTaGATGACGAGGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: YKAHFLNKDFPTTGFHRYCRFSS*MTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCA...GTACCTATGGAAACCAGTTGTTGGGAAATCCTTGTTAAGAAAATGGGCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp ATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: IVHRIHLVVSAIDVVDISRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...ACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTTACCGCCCACGCCCATaGCATTTGTGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFYRPRP*HLWHSL
Trigger: CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTA...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATCTGCAATGCCCCTCTaGGAGGCAAGAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: YESWIPPEELYKGLELDRSAMPL*EAREMS
Trigger: AGACATCTCTCTTGCCTCCCAGAGGGGCATTGCAGA...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCAGGGGGATCAGCTCAATaGTCTGGCGCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRSTPEPRPTKGKSKIKSGGSAQ*SGAAAG
Trigger: TCCTGCAGCAGCGCCAGACCATTGAGCTGATCCCCC...TGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGTCCCATGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 4 (lower is better)
Translates to: ELPGVFLKHRRTLNLDVPCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...TGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 4 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 4 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TCAAATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTATCGGGGCATTAACTTaGAGACCAGAGGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SNHTHHRGINLETRGKVLIGALT*RPEAKS
Trigger: GGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT...AAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATTCCACCACACCACGATaGGTGTATTGTCGATATGCA +
Preference number: 4 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDSTTPR*VYCRYA
Trigger: TGCATATCGACAATACACCCATCGTGGTGTGGTGGA...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp ACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTGTTAGCATCCTCCAGCCCTaGCACACAGAGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: TWRPEAKSLPFKLFLSFVSILQP*HTEGPV
Trigger: GACGGGCCCCTCTGTGTGCCAGGGCTGGAGGATGCT...AACAAATGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR CCA 90 bp GTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTTAGCCATCTCAGTGGGTaGAATGAGCATCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VHRIHLVVSAIDVVDISLSHLSG*NEHPFF
Trigger: GAAGAAGGGATGCTCATTCCACCCACTGAGATGGCT...AAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCATTTCCTGGAGGACTGTaGGTATTAGGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPFPGGL*VLGVQE
Trigger: TTCTTGGACACCTAATACCCACAGTCCTCCAGGAAA...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp GTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTTCTCTACCAACCACGATaGAAGGTGCCACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VHRIHLVVSAIDVVDISLLYQPR*KVPPKL
Trigger: AAGCTTTGGTGGCACCTTCCATCGTGGTTGGTAGAG...AAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp TGGTCAAACTCACACACACAAAGTAGAGTGATGGTTGACAGGGGCATACACAAAAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: WSNSHTQSRVMVDRGIHKNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...TTTGTGTATGCCCCTGTCAACCATCACTCTACTTTGTGTGTGTGAGTTTGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp ACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTGTTGCTCCCTGGGGCAGTTaGGCCGGTGCTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: TWRPEAKSLPFKLFLSFVAPWGS*AGAQTQ
Trigger: TTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGC...AACAAATGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTTGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQACRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTTGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCCRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGACACACAAAGTAGAGTaGTGGTTGACAGGGGCATAC +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLTHKVE*WLTGAY
Trigger: GTATGCCCCTGTCAACCATCACTCTACTTTGTGTGT...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR TCA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGAAATGCCTCGTGATTTaGATTATACTTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: HTQRVSAIFLGKREWQALKCLVI*IILEMV
Trigger: CACCATCTCAAGTATAATTCAAATCACGAGGCATTT...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR GCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTGGGCAGTTGAGCCGGTaGTCAGACACAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFGQLSR*SDTNSN
Trigger: GTTTGAGTTTGTGTCTGAGCACCGGCTCAACTGCCC...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GAACATTTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCTCTGGGGACAGCCATaGTATGTCACACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: EHFSNTQIVKRLPLEEAHLWGQP*YVTRWY
Trigger: GTACCATCGTGTGACATAGCATGGCTGTCCCCAGAG...GTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAAATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTCTGGGGACAGCCATaGTATGTCACACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFLWGQP*YVTRWY
Trigger: GTACCATCGTGTGACATAGCATGGCTGTCCCCAGAG...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTTTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQAFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTTTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 4 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGCAGAGGCAAAGTCCTTaGCATTTAAATTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: TQRVSAIFLGKREWQALGQRQSP*HLNYFS
Trigger: AGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTG...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTATCCTCTGTACTCTTTaGAGTAATAGCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: EHTQRVSAIFLGKREWQAILCTL*SNSILL
Trigger: CAAGAGGATGCTATTACTGCAAAGAGTACAGAGGAT...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR GCA 90 bp AGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGTTTTCATCAATCCTCAGAGCCCGTaGATTCAACAAAGATATAAC +
Preference number: 4 (lower is better)
Translates to: RDVSQREVHDGVHHRVFINPQSP*IQQRYN
Trigger: GTTATATCTTTGTTGAATGCACGGGCTCTGAGGATT...GATGAAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CCA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCTCTCCAGGAGCTCTGTaGGGGGCGCCAGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: RYLCVSLNISVILRSSRGSPGAL*GAPEDS
Trigger: AGAGTCCTCTGGCGCCCCCCACAGAGCTCCTGGAGA...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGAAGCCAGTCATAGCTaGGCAGTCTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGEASHS*AVSPGA
Trigger: AGCTCCTGGAGAGACTGCCCAGCTATGACTGGCTTC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATGCCGCTTCAGCTCCTaGATGACGAGGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALTWRPEAKSLPFKLFLSCRFSS*MTRSPA
Trigger: GGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCA...TGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp TCTTTCTTCACACTCTTTCCACATATATTGCATGACGAGTTCCAGCCTTGTCCATACCGCCCACGCCCATaGCATTTGTGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SFFTLFPHILHDEFQPCPYRPRP*HLWHSL
Trigger: CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTA...TGGACAAGGCTGGAACTCGTCATGCAATATATGTGGAAAGAGTGTGAAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFEGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTTTGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 4 (lower is better)
Translates to: VHRIHLVVSAIDVVDISLCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...AAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTC +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGVNGRL*GQPCYV
Trigger: GACATAGCATGGCTGTCCCCAGAGCCTGCCATTCAC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TCTTTCTTCACACTCTTTCCACATATATTGCATGACGAGTTCCAGCCTTGTCCAGTGAATGGCAGGCTCTaGGGACAGCCATGCTATGTC +
Preference number: 4 (lower is better)
Translates to: SFFTLFPHILHDEFQPCPVNGRL*GQPCYV
Trigger: GACATAGCATGGCTGTCCCCAGAGCCTGCCATTCAC...TGGACAAGGCTGGAACTCGTCATGCAATATATGTGGAAAGAGTGTGAAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGATCGGGGCATTAACTTaGAGACCAGAGGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKIGALT*RPEAKS
Trigger: GGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp GTTAAACATATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCGAGCCTGGAGGACTGTaGGTTTTAGGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: VKHMSHGFHQRSCIRGWSEPGGL*VLGVQE
Trigger: TTCTTGGACACCTAAAACCCACAGTCCTCCAGGCTC...GCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATATGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR CCA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCAGTAACGTTTTCCTaGATATTACAATCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQAVTFS*ILQSTV
Trigger: CACCGTGGATTGTAATATCCAGGAAAACGTTACTGC...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR TCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTTGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GTAGACATAAGTCTTTCCTTGGTACCAATAGTGAACTTCTGTGAGGGGGATCAGGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: VDISLSLVPIVNFCEGDQARVCM*LSNAAN
Trigger: GTTGGCTGCATTGGACAATCACATACAAACCCTGGC...CTGATCCCCCTCACAGAAGTTCACTATTGGTACCAAGGAAAGACTTATGTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTTTGCCAAAGCCAATTTaGATTGGATTCCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCLPKPI*IGFLSL
Trigger: AAGTGAAAGGAATCCAATTCAAATTGGCTTTGGCAA...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp ACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTGTTCTCTCCCTGAGCAAGTaGTGCATCTTCGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TWRPEAKSLPFKLFLSFVLSLSK*CIFACR
Trigger: CCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAG...AACAAATGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCCTCTCCCTGAGCAAGTaGTGCATCTTCGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RYLCVSLNISVILRSSRGLSLSK*CIFACR
Trigger: CCGGCAGGCGAAGATGCAGCACTTGCTCAGGGAGAG...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp TCAAATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SNHTHHRGINLETRGKVLTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...AAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCATTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 4 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGACGCCCATGGCATTTGTaGCATTCCTTGACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGRPWHL*HSLTSD
Trigger: GTCACTGGTCAAGGAATGCCACAAATGCCATGGGCG...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGAGGGAAGTCCACGATaGGGTACACCACCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGEGSPR*GTPPSF
Trigger: AAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 4 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GTTAAACATATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTGCTATGTCACACGATaGTACAGCCACAGCAATACC +
Preference number: 4 (lower is better)
Translates to: VKHMSHGFHQRSCIRGWSCYVTR*YSHSNT
Trigger: GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCA...GCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATATGTTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCAAAAAGATTCAGGTaGTCAAACTCACACACACAA +
Preference number: 4 (lower is better)
Translates to: PCYVTRWYSHSNTAQDSPPKRFR*SNSHTQ
Trigger: TTGTGTGTGTGAGTTTGACCACCTGAATCTTTTTGG...TGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAATCTGGCCTTTAGGTaGTTTTTGATATTCACTTCC +
Preference number: 4 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSNLAFR*FLIFTS
Trigger: GGAAGTGAATATCAAAAACCACCTAAAGGCCAGATT...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp GCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTGACCAGTGACGAGTaGGGGACCTGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALTWRPEAKSLPFKLFLSLTSDE*GTWNFL
Trigger: CAGGAAGTTCCAGGTCCCTCACTCGTCACTGGTCAA...TGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGCACAAATGCCTCGTaGTTTGAATTATACTTGAGA +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKRECTNAS*FELYLR
Trigger: TCTCAAGTATAATTCAAATCACGAGGCATTTGTGCA...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR TCA 90 bp TACAAGGCCCATTTTCTTAACAAGGATTTCCCAACAACTGGTTTCCATAGGTACTCTCGGCCTCAAAACTaGGGTCCACCACACCATACA +
Preference number: 4 (lower is better)
Translates to: YKAHFLNKDFPTTGFHRYSRPQN*GPPHHT
Trigger: TGTATGGTGTGGTGGACCTCAGTTTTGAGGCCGAGA...GTACCTATGGAAACCAGTTGTTGGGAAATCCTTGTTAAGAAAATGGGCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR TCA 90 bp GGTACTATTACAAGGCCCATTTTCTTAACAAGGATTTCCCAACAACTGGTTTCCCATCCCTTCTTCTTCTaGGAGTCATGGTGGCGATCC +
Preference number: 4 (lower is better)
Translates to: GTITRPIFLTRISQQLVSHPFFF*ESWWRS
Trigger: GGATCGCCACCATGACTCTCAGAAGAAGAAGGGATG...GGAAACCAGTTGTTGGGAAATCCTTGTTAAGAAAATGGGCCTTGTAATAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR TCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTTCCACATATATTGCATaGCGAGTTCCAGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFSTYIA*RVPALS
Trigger: GGACAAGGCTGGAACTCGTCATGCAATATATGTGGA...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCGCTTCTTCTCCCCCTTaGAGGTGGCGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RYLCVSLNISVILRSSRGASSPP*RWRRSC
Trigger: ACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGC...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR GCA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGAACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: YESWIPPEELYKGLELDRTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp CACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCCAGAGGCAAAGTCCTTaGCATTTAAATTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: HSLILDSLKVSRRYLQRVQRQSP*HLNYFS
Trigger: AGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTG...GACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
CDS-3UTR GCA 90 bp ACGAGACAGATGGGTTCCTGTTTGCCTTCCAGATGGGCAGGCAATGAAAAGCCATTATACTTGAGATGGTaGCAAAAAGATTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TRQMGSCLPSRWAGNEKPLYLRW*QKDSGG
Trigger: ACCACCTGAATCTTTTTGGCACCATCTCAAGTATAA...TGGCTTTTCATTGCCTGCCCATCTGGAAGGCAAACAGGAACCCATCTGTCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CCA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 4 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGAGCAGGTACCTTACTTaGGATTTACTATCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLSRYLT*DLLSDR
Trigger: CCTGTCAGATAGTAAATCCCAAGTAAGGTACCTGCT...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR CCA 90 bp GTCCACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGAATTATACTTGAGATaGTGCCAAAAAGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: VHSLILDSLKVSRRYLQRELYLR*CQKDSG
Trigger: ACCTGAATCTTTTTGGCACCATCTCAAGTATAATTC...CCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp GCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCAAACATCGGAGGACCTTaGACCTTGATGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ALTWRPEAKSLPFKLFLSNIGGP*TLMSQS
Trigger: GCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTT...TGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp GAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAAAATGCCTCGTGATTTaGATTATACTTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: ELPGVFLKHRRTLNLDVPKCLVI*IILEMV
Trigger: CACCATCTCAAGTATAATTCAAATCACGAGGCATTT...TGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGCAGAGGCAAAGTCCTTaGCATTTAAATTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLQRQSP*HLNYFS
Trigger: AGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTG...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
CDS-3UTR GCA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTTTATACTTGAGATGGTaGCAAAAAGATTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLLYLRW*QKDSGG
Trigger: ACCACCTGAATCTTTTTGGCACCATCTCAAGTATAA...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR CCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCACATGATGACAAGCTaGATGAAGTGCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFHMMTS*MKCNSF
Trigger: GAAGCTGTTGCACTTCATCCAGCTTGTCATCATGTG...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp TCAAATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 4 (lower is better)
Translates to: SNHTHHRGINLETRGKVLSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...AAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTATCTTCTCAGCCTCTaGAAATCACCAACTATATTA +
Preference number: 4 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSYLLSL*KSPTIL
Trigger: TAATATAGTTGGTGATTTCCAGAGGCTGAGAAGATA...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR CCA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGCCAAAAAGATTCAGGTaGTCAAACTCACACACACAA +
Preference number: 4 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLPKRFR*SNSHTQ
Trigger: TTGTGTGTGTGAGTTTGACCACCTGAATCTTTTTGG...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR CCA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAGAATTATACTTGAGATaGTGCCAAAAAGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREELYLR*CQKDSG
Trigger: ACCTGAATCTTTTTGGCACCATCTCAAGTATAATTC...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
3UTR CAA 72 bp GTCAGTGCCATAGATGTAGTAGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTCTGTGAGGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: VSAIDVVDISLS*VPIVNFCEGDQ
Trigger: CTGATCCCCCTCACAGAAGTTCACTATTGGTACCAAGGAAAGACTTATGTCTACTACATCTATGGCACTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCAATTTGTGGCATTCCTTaGCCAGTGACGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALTWRPEAKSLPFKLFLSICGIP*PVTSEG
Trigger: TCCCTCACTCGTCACTGGTCAAGGAATGCCACAAAT...TGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp AACCCAACCTTGAGTATTTTTACTCCTCACGGTTTCCTGTTTCCCTTAAAAAGTGCCAGGGTTTGTATGTaGTTGTCCAATGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: NPTLSIFTPHGFLFPLKSARVCM*LSNAAN
Trigger: GTTGGCTGCATTGGACAATCACATACAAACCCTGGC...ACTTTTTAAGGGAAACAGGAAACCGTGAGGAGTAAAAATACTCAAGGTTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR TCA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGTGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKCRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR GCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAACACCTGGTGGTCAGTaGCATAGATGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGTPGGQ*HRCSRH
Trigger: ATGTCTACTACATCTATGGCACTGACCACCAGGTGT...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp GTTAAACATATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 4 (lower is better)
Translates to: VKHMSHGFHQRSCIRGWSSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...GCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATATGTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGATGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp GTAGACATAAGTCTTTCCTTGGTACCAATAGTGAACTTCTGTGAGGGGGATCAGTGTAGGTTAAACATATaGGTCATGGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: VDISLSLVPIVNFCEGDQCRLNI*VMDSTR
Trigger: TCTGGTGGAATCCATGACTCATATGTTTAACCTACA...CTGATCCCCCTCACAGAAGTTCACTATTGGTACCAAGGAAAGACTTATGTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTAGCTGTATAAGGGGTTaGAGCTTGATAGATGATAAG +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFSCIRG*SLIDDK
Trigger: CTTATCATCTATCAAGCTCCAACCCCTTATACAGCT...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTTGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: IGALTWRPEAKSLPFKLFWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...AAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR TCA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTTGCACAAATGCCTCGTaGTTTGAATTATACTTGAGA +
Preference number: 4 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFCTNAS*FELYLR
Trigger: TCTCAAGTATAATTCAAATCACGAGGCATTTGTGCA...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR GCA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGATTTTCTGGAAGGACATaGCAGGGTTTGTATGTGATT +
Preference number: 4 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGFSGRT*QGLYVI
Trigger: AATCACATACAAACCCTGGCATGTCCTTCCAGAAAA...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR TCA 90 bp ACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTGTTTGGTTAGTAAAGGGTTaGAATGTCCACTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: TWRPEAKSLPFKLFLSFVWLVKG*NVHSLI
Trigger: GATAAGCGAGTGGACATTTCAACCCTTTACTAACCA...AACAAATGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CCA 90 bp AACCCAACCTTGAGTATTTTTACTCCTCACGGTTTCCTGTTTCCCTTAAAAAGTAACTGCTTTCTGCATTaGGACATCAGTAGTAACATC +
Preference number: 4 (lower is better)
Translates to: NPTLSIFTPHGFLFPLKSNCFLH*DISSNI
Trigger: GATGTTACTACTGATGTCCCAATGCAGAAAGCAGTT...ACTTTTTAAGGGAAACAGGAAACCGTGAGGAGTAAAAATACTCAAGGTTGGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455157.6
3UTR CAA 72 bp TTTAATGAGGCAAAAGTATCATTAACCAACCCAACCTaGAGTATTTTTACTCCTCACGGTTTCCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FNEAKVSLTNPT*SIFTPHGFLFP
Trigger: GGGAAACAGGAAACCGTGAGGAGTAAAAATACTCAAGGTTGGGTTGGTTAATGATACTTTTGCCTCATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR GCA 90 bp ATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCAGAGGCAAAGTCCTTaGCATTTAAATTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: IGALTWRPEAKSLPFKLFQRQSP*HLNYFS
Trigger: AGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTG...AAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp TGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCTGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGG +
Preference number: 5 (lower is better)
Translates to: CCRTRAREAKAALCSAMPWQPLH*YRPRPW
Trigger: CCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA...GGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS GCA 90 bp AGGAAGAGACGTCAGAGCCAGATGGCCCCTCCGCCCTGGCTCACCTaGTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: RKRRQSQMAPPPWLT*CRTRAREAKAALCS
Trigger: AGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCAGGTGAGCCAGGGCGGAGGGGCCATCTGGCTCTGACGTCTCTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415132.5
ENST00000495366.5
CDS TCA 90 bp AGGCACTGGCCCAGGGCTGATGGCAGCGCCCATGGAGACTCACCCTaGGGACCGTGGGTGGGACGACAGACAGGGACCCTAACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RHWPRADGSAHGDSP*GPWVGRQTGTLTSA
Trigger: GGCCGAGGTTAGGGTCCCTGTCTGTCGTCCCACCCACGGTCCTCAGGGTGAGTCTCCATGGGCGCTGCCATCAGCCCTGGGCCAGTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495366.5
CDS GCA 90 bp TGCCGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGGATGGGCACCGCACCTGCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: CRTPRTADISGTAWL*AWLRSRMGTAPAQH
Trigger: GTGCTGAGCAGGTGCGGTGCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS-3UTR CAA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCGAGGGCCAGGACCTTaGCTCCTGGGGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PRGSRCTCTAHAHGICGIRGPGP*LLGPPW
Trigger: CCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCG...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTTGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 5 (lower is better)
Translates to: AGRGHGRPRQRCALQCPSCLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...AGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCATCTCCGGGACTGCTaGGCTTTGCGCTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: CCRTRAREAKAALCSAMPHLRDC*ALRLAP
Trigger: CGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATG...GGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: AAGRGHGRPRQRCALQCPQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...GGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS CCA 90 bp ACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGCACCGCACCTGCTCAGCACCCACTG +
Preference number: 5 (lower is better)
Translates to: TPRTADISGTAWLCA*LRSRMGTAPAQHPL
Trigger: CAGTGGGTGCTGAGCAGGTGCGGTGCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS-3UTR CAA 90 bp ACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCCTCTGGGAGGCAAGAGATGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGG +
Preference number: 5 (lower is better)
Translates to: TGGQGSAVLCNAPLGGKRWQPLH*YRPRPW
Trigger: CCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA...TCTCTTGCCTCCCAGAGGGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGACAGCCCGAGGGCCAGGACCTTaGCTCCTGGGGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: RVSAIFLGKREWQALGTARGPGP*LLGPPW
Trigger: CCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCG...GGCTGTCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCCTGGGGGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: SLGEAPLCGPSTEWLVKGGGGAS*RPIHRV
Trigger: CACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC...ACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGCGAGGGCCAGGACCTTaGCTCCTGGGGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: TQRVSAIFLGKREWQALGRGPGP*LLGPPW
Trigger: CCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCG...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACGAGGGCCAGGACCTTaGCTCCTGGGGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: AGSGDSHAMSHDGTATAIRGPGP*LLGPPW
Trigger: CCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCG...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCACGAGGGCCAGGACCTTaGCTCCTGGGGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSRGPGP*LLGPPW
Trigger: CCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCG...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TGCTGCAGGACGCGGGCACGGGAGGCCAAGGCAGCGCTGTGCTCTGCAATGCCCAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: CCRTRAREAKAALCSAMPKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...GGGCATTGCAGAGCACAGCGCTGCCTTGGCCTCCCGTGCCCGCGTCCTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGATGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGG +
Preference number: 5 (lower is better)
Translates to: LRECRPSSLANVNGRLWGWQPLH*YRPRPW
Trigger: CCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 5 (lower is better)
Translates to: LKHRRTLNLDVPEPGGGACLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...GGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCCTGGGGGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTCATCTCCGGGACTGCTaGGCTTTGCGCTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: SLGEAPLCGPSTEWLVKGHLRDC*ALRLAP
Trigger: CGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATG...ACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CGGACCCCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTGGCTCTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: RTPRTADISGTAWLCAWLCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...GAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGGGGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCACCGTGCCCGCCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCACTATGATAGGCATGTaGCTTCCATGTTATCCTTCC +
Preference number: 5 (lower is better)
Translates to: APCPPRGSRCTCTAHAHGTMIGM*LPCYPS
Trigger: GGAAGGATAACATGGAAGCAACATGCCTATCATAGT...GCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CCCCGTGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCAGATGGGTTCCTGTTaGCCTTCCAGATGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PRGSRCTCTAHAHGICGIQMGSC*PSRWAG
Trigger: GCCTGCCCATCTGGAAGGCAAACAGGAACCCATCTG...AATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS CCA 90 bp CCTCCAGCCCTGGCACACAGAGGGGCCCGTCTGTCTTCAGATCCATaGATGGCAGCACAAGAGACACTGTGGGCTGGAGAGGCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: PPALAHRGARLSSDP*MAAQETLWAGEARD
Trigger: ATCTCTGGCCTCTCCAGCCCACAGTGTCTCTTGTGCTGCCATCCATGGATCTGAAGACAGACGGGCCCCTCTGTGTGCCAGGGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000495366.5
CDS-3UTR CAA 90 bp GCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: AMSHDGTATAIPLRIVHRGGGAS*RPIHRV
Trigger: CACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC...GCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TCTGGCGCTCTACGTCCTCATCCTTCCGCTCCGACGTTCTCAGGAAAGAGGGCTCATCTCCGGGACTGCTaGGCTTTGCGCTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: SGALRPHPSAPTFSGKRAHLRDC*ALRLAP
Trigger: CGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATG...AGCCCTCTTTCCTGAGAACGTCGGAGCGGAAGGATGAGGACGTAGAGCGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR CAA 90 bp TGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCCATCTCCGGGACTGCTaGGCTTTGCGCTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: WEAREMSRRGKSTMGYTTHLRDC*ALRLAP
Trigger: CGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATG...GGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TGGCAGCCGCTGCACTTGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: WQPLHLYRPRPWHLWHSLQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...CAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS GCA 90 bp GAAGCAGGGTTCTTCCTGTGTTCCAGGAACGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGGGCCTCCAAAGGTGGGAAGAATATC +
Preference number: 5 (lower is better)
Translates to: EAGFFLCSRNEGQDL*SWGLPGASKGGKNI
Trigger: GATATTCTTCCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCGTTCCTGGAACACAGGAAGAACCCTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000495366.5
CDS CCA 90 bp GCCCGTCTGTCTTCAGATCCATGGATGGCAGCACAAGAGACACTGTaGGCTGGAGAGGCCAGAGATGACTCCCCGGAGGAAGCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: ARLSSDPWMAAQETL*AGEARDDSPEEAGF
Trigger: GAACCCTGCTTCCTCCGGGGAGTCATCTCTGGCCTCTCCAGCCCACAGTGTCTCTTGTGCTGCCATCCATGGATCTGAAGACAGACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000495366.5
CDS CCA 90 bp CAGCCCTGGCACACAGAGGGGCCCGTCTGTCTTCAGATCCATGGATaGCAGCACAAGAGACACTGTGGGCTGGAGAGGCCAGAGATGACT +
Preference number: 5 (lower is better)
Translates to: QPWHTEGPVCLQIHG*QHKRHCGLERPEMT
Trigger: AGTCATCTCTGGCCTCTCCAGCCCACAGTGTCTCTTGTGCTGCCATCCATGGATCTGAAGACAGACGGGCCCCTCTGTGTGCCAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000495366.5
CDS-3UTR CAA 90 bp GTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACAGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: VTRWYSHSNTAQDSPPHTGGGAS*RPIHRV
Trigger: CACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC...TGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TGTGAGGGGGATCAGCTCAATGGTCTGGCGCTCTACGTCCTCATCCTTCCGCTCCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: CEGDQLNGLALYVLILPLQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...GAGCGGAAGGATGAGGACGTAGAGCGCCAGACCATTGAGCTGATCCCCCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR CAA 90 bp TGCAACAGCTTCTTCTCCCCCTTGCAGGTGGCGCAGGTCTTGTTCCCTCTCCCTCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: CNSFFSPLQVAQVLFPLPQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...AGGGAGAGGGAACAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCTGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREGGGAS*RPIHRV
Trigger: CACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQGGGAS*RPIHRV
Trigger: CACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGG +
Preference number: 5 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSWQPLH*YRPRPW
Trigger: CCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CTGAAACATCGGAGGACCTTGAACCTTGATGTCCCAGAGCCTGGGGGAGGCGCCTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: LKHRRTLNLDVPEPGGGACRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...GGCGCCTCCCCCAGGCTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS TCA 90 bp GCTGAGGCCCAAGAAGCGCTTGAACTCGGGAGGCGGAGGTTGCAGTaGGCCCGGATTTTGCCTGTATACTCCAACCCAAGGCTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: AEAQEALELGRRRLQ*ARILPVYSNPRLLE
Trigger: TTCTAGCAGCCTTGGGTTGGAGTATACAGGCAAAATCCGGGCTCACTGCAACCTCCGCCTCCCGAGTTCAAGCGCTTCTTGGGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478513.1
CDS TCA 90 bp CCTCCTCCTGGAAGTCCCTTCCCTGAGGCCATGCCACCCCCTTACTaGAGTCTTTCTGGCCCCAACACCTCCAAGAGGAAAGAATCCTCC +
Preference number: 5 (lower is better)
Translates to: PPPGSPFPEAMPPPY*SLSGPNTSKRKESS
Trigger: GGAGGATTCTTTCCTCTTGGAGGTGTTGGGGCCAGAAAGACTTCAGTAAGGGGGTGGCATGGCCTCAGGGAAGGGACTTCCAGGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495366.5
CDS-3UTR CAA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCTGTCCTCTGCCCCCTaGAAGAAGCCAGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHLSSAP*KKPVIA
Trigger: AGCTATGACTGGCTTCTTCAAGGGGGCAGAGGACAG...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGCGAGGGCCAGGACCTTaGCTCCTGGGGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GFHQRSCIRGWSLIDDKLRGPGP*LLGPPW
Trigger: CCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCG...CAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGATGACGAGGTCTCCAGCCACCAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: YLQRVCRFSSWMTRSPATKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...GGTGGCTGGAGACCTCGTCATCCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CCCAACCCGTGGGCGGGAGAGGTCTCCTTTCCTGGTAACCCCGTCCCTGTGTTTAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: PNPWAGEVSFPGNPVPVFKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...AAACACAGGGACGGGGTTACCAGGAAAGGAGACCTCTCCCGCCCACGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp TGTGAGGGGGATCAGCTCAATGGTCTGGCGCTCTACGTCCTCATCCTTCCGCTCCCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 5 (lower is better)
Translates to: CEGDQLNGLALYVLILPLPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...GAGCGGAAGGATGAGGACGTAGAGCGCCAGACCATTGAGCTGATCCCCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415132.5
CDS-3UTR CAA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTTGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 5 (lower is better)
Translates to: EHTQRVSAIFLGKREWQACLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 5 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRCLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CCTCTGGGAGGCAAGAGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: PLGGKRDVSQREVHDGVHCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...GTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCTCTTGCCTCCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGACGAGGGCCAGGACCTTaGCTCCTGGGGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: YESWIPPEELYKGLELDRRGPGP*LLGPPW
Trigger: CCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCG...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGCCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 5 (lower is better)
Translates to: TQRVSAIFLGKREWQALGPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TCAAATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTTGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGG +
Preference number: 5 (lower is better)
Translates to: SNHTHHRGINLETRGKVLWQPLH*YRPRPW
Trigger: CCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA...AAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp ATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACCATCTCCGGGACTGCTaGGCTTTGCGCTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: MQPTVNTLRECRPSSLANHLRDC*ALRLAP
Trigger: CGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATG...GTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCCATCTCCGGGACTGCTaGGCTTTGCGCTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSHLRDC*ALRLAP
Trigger: CGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATG...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: EHTQRVSAIFLGKREWQASFFSP*QVAQVL
Trigger: CAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCT...AGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: HSLILDSLKVSRRYLQRVSFFSP*QVAQVL
Trigger: CAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCT...GACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCSFFSP*QVAQVL
Trigger: CAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCT...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TCCAGCCACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCAATCTTCAGAGCACCTaGAGGGGGTTGAACGAGCGT +
Preference number: 5 (lower is better)
Translates to: SSHRAAVAALRVHKAEEGNLQST*RGLNER
Trigger: ACGCTCGTTCAACCCCCTCAAGGTGCTCTGAAGATT...GCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CAA 90 bp ATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCACAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: ITRIIGALTWRPEAKSLPQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...TGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQSFFSP*QVAQVL
Trigger: CAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCT...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CACCGTGCTGCTGTAGCAGCACTTAGAGTCCACAAAGCTGAGGAGGGCTTCCCGCAGAAATGCCAGGCCTaGAGAAAAGCTCACCTACTC +
Preference number: 5 (lower is better)
Translates to: HRAAVAALRVHKAEEGFPQKCQA*RKAHLL
Trigger: GAGTAGGTGAGCTTTTCTCAAGGCCTGGCATTTCTG...CGGGAAGCCCTCCTCAGCTTTGTGGACTCTAAGTGCTGCTACAGCAGCACGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCGCTTCTCCAACTGGCTaGTCAGAAGGATGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGASPTG*SEGWPG
Trigger: CCCAGGCCATCCTTCTGACAAGCCAGTTGGAGAAGC...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGACTGTCCTCTGCCCCCTaGAAGAAGCCAGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRLSSAP*KKPVIA
Trigger: AGCTATGACTGGCTTCTTCAAGGGGGCAGAGGACAG...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTCTGTCCTCTGCCCCCTaGAAGAAGCCAGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSLSSAP*KKPVIA
Trigger: AGCTATGACTGGCTTCTTCAAGGGGGCAGAGGACAG...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GTCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 5 (lower is better)
Translates to: VTRWYSHSNTAQDSPPHTPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...TGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTTGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGG +
Preference number: 5 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFWQPLH*YRPRPW
Trigger: CCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCA...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTCAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLKVSRRYLQRVCRFSSWKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...CCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CCCAACCCGTGGGCGGGAGAGGTCTCCTTTCCTGGTAACCCCGTCCCTGTGTTTATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: PNPWAGEVSFPGNPVPVFIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...AAACACAGGGACGGGGTTACCAGGAAAGGAGACCTCTCCCGCCCACGGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp GTCCACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGCGTCATCGCAGGGACTaGAAGTCTTTCTGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: VHSLILDSLKVSRRYLQRRHRRD*KSFWPQ
Trigger: TTGGGGCCAGAAAGACTTCAAGTCCCTGCGATGACG...CCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR CAA 90 bp TCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACGTCTTTCCAGCTGGGTaGGAAGAATCTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: SHDGTATAIPLRIVHRIHVFPAG*EESAGG
Trigger: GCCTCCAGCAGATTCTTCCAACCCAGCTGGAAAGAC...GTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS GCA 90 bp CAGGGGTGGGAACGCAGCCCAGGATCAGAAAGAAAGCAGGTCATTTaGAATCTAGCAGAGCCTAAGGGCAGAAGGCAGGTGAGAGAATTC +
Preference number: 5 (lower is better)
Translates to: QGWERSPGSERKQVI*NLAEPKGRRQVREF
Trigger: GAATTCTCTCACCTGCCTTCTGCCCTTAGGCTCTGCTAGATTGCAAATGACCTGCTTTCTTTCTGATCCTGGGCTGCGTTCCCACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS GCA 90 bp GGGTCCGAACTCAGCAGCCCGGGATCAGAAAGAAAGCAGGTCATTTaGAATCTATCGGAGCCTAAGGGCAGAAGGCAGGTGAGAGAATTC +
Preference number: 5 (lower is better)
Translates to: GSELSSPGSERKQVI*NLSEPKGRRQVREF
Trigger: GAATTCTCTCACCTGCCTTCTGCCCTTAGGCTCCGATAGATTGCAAATGACCTGCTTTCTTTCTGATCCCGGGCTGCTGAGTTCGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455157.6
ENST00000464494.1
CDS GCA 90 bp CACGACAAATGGAGTTGCTTGTTGGTTTCCCTGGCTGACAAAGACTaGCTGGTAAGAAGAACCCCAGGTCTTGGCCCTCTTACAGGACCG +
Preference number: 5 (lower is better)
Translates to: HDKWSCLLVSLADKD*LVRRTPGLGPLTGP
Trigger: CGGTCCTGTAAGAGGGCCAAGACCTGGGGTTCTTCTTACCAGGCAGTCTTTGTCAGCCAGGGAAACCAACAAGCAACTCCATTTGTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS-3UTR CAA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAACTGTCCTCTGCCCCCTaGAAGAAGCCAGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: ANSEHTQRVSAIFLGKRELSSAP*KKPVIA
Trigger: AGCTATGACTGGCTTCTTCAAGGGGGCAGAGGACAG...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGGGGAS*RPIHRV
Trigger: CACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCACGGGGGAGGCGCCTCTTaGCGGCCCATCCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: EEAHQNQDRQREKAKSNHGGGAS*RPIHRV
Trigger: CACTCTGTGGATGGGCCGCAAAGAGGCGCCTCCCCC...GTGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: HTQRVSAIFLGKREWQALKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAACCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 5 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTTGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 5 (lower is better)
Translates to: IVHRIHLVVSAIDVVDISCLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...ACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGTGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 5 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKCLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTTAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VHRIHLVVSAIDVVDISLSFFSP*QVAQVL
Trigger: CAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCT...AAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGAAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LRECRPSSLANVNGRLWGKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: MQPTVNTLRECRPSSLANCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...GTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: SEHTQRVSAIFLGKREWQCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...CTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGAAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: LRECRPSSLANVNGRLWGRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS GCA 90 bp CAGGGGTCTGAACGCAGCCCAGGATCAGAAAGAAAGCAGGTCATTTaGAATCTATCGGAGCCTGGAGGACTGTGGGTTTTAGGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: QGSERSPGSERKQVI*NLSEPGGLWVLGVQ
Trigger: TTGGACACCTAAAACCCACAGTCCTCCAGGCTCCGATAGATTGCAAATGACCTGCTTTCTTTCTGATCCTGGGCTGCGTTCAGACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS CCA 90 bp TGTCCAAGAAGAAAGCTCAGAGCTGCCGAAAGCAGGTACCTTACTTaGGATTTACTATCTGACAGGGGTGGGAACGCAGCCCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: CPRRKLRAAESRYLT*DLLSDRGGNAAQDQ
Trigger: CTGATCCTGGGCTGCGTTCCCACCCCTGTCAGATAGTAAATCCCAAGTAAGGTACCTGCTTTCGGCAGCTCTGAGCTTTCTTCTTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS-3UTR CAA 90 bp TCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCTGCCGCTTCAGCTCCTGGGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: SLKVSRRYLQRVCRFSSWVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...CCAGGAGCTGAAGCGGCAGACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: FSNTQIVKRLPLEEAHQNSFFSP*QVAQVL
Trigger: CAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCT...GTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp CACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: HTQRVSAIFLGKREWQALKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...CAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTAGTAATAGCATCCTCTaGCCCCTGGAGGACTGTGGG +
Preference number: 5 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLSNSIL*PLEDCG
Trigger: CCCACAGTCCTCCAGGGGCAAGAGGATGCTATTACT...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317371.8
CDS-3UTR CAA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: TQRVSAIFLGKREWQALGVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: GTATAIPLRIVHRIHLVVVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...GACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ATCACACGCATCATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCAAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: ITRIIGALTWRPEAKSLPKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...TGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGATGATGCGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTAGCTTCTTCTCCCCCTaGCAGGTGGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFSFFSP*QVAQVL
Trigger: CAAGACCTGCGCCACCTGCAAGGGGGAGAAGAAGCT...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TCACACGATGGTACAGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SHDGTATAIPLRIVHRIHKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...GTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACCATCGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GGAGGCGCCTCTTTGCGGCCCATCCACAGAGTGGTTAGTAAAGGGTTGAAATGTAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: GGASLRPIHRVVSKGLKCRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...ACATTTCAACCCTTTACTAACCACTCTGTGGATGGGCCGCAAAGAGGCGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGAAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: SNTAQDSPPHTPGGQCHRRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...TCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGAATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LRECRPSSLANVNGRLWGIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...TCCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ATGGCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: MAGSGDSHAMSHDGTATAIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...TGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTAGACATAAGTCTTAGCACCTTGAGGGGGTaGAACGAGCGTGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: VHRIHLVVSAIDVVDISLSTLRG*NERVVL
Trigger: CAACACAACACGCTCGTTCAACCCCCTCAAGGTGCT...AAGACTTATGTCTACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CAA 90 bp CACAGCAGTGACGAGACAGATGGGTTCCTGTTTGCCTTCCAGATGGGCAGGCAAGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: HSSDETDGFLFAFQMGRQVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...TTGCCTGCCCATCTGGAAGGCAAACAGGAACCCATCTGTCTCGTCACTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 5 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGACAGGTGGCGCAGGTCTaGTTCCCTCTCCCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGQVAQV*FPLPEQ
Trigger: TTGCTCAGGGAGAGGGAACAAGACCTGCGCCACCTG...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACCAAGACCGACAAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SDRQEAPTRRSTPEPRPTKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...TGTCGGTCTTGGTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: TQRVSAIFLGKREWQALGDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GATTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: DCPMQPTVNTLRECRPSSRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...GGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCCACAGCAATACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCCAGAGGCAAAGTCCTaGCCATTTAAATTATTTCTC +
Preference number: 5 (lower is better)
Translates to: SHSNTAQDSPPHTPGGQCPEAKS*PFKLFL
Trigger: GAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGG...GCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGACCACGATGGGTGTATaGTCGATATGCACAAATGCC +
Preference number: 5 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLTTMGV*SICTNA
Trigger: GGCATTTGTGCATATCGACAATACACCCATCGTGGT...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR CAA 90 bp CACTCGCTTATCCTGGATTCACTAAAGGTCTCCAGACGGTACCTGCAGAGGGTCCTCTTTCCACATATATaGCATGACGAGTTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: HSLILDSLKVSRRYLQRVLFPHI*HDEFQP
Trigger: AGGCTGGAACTCGTCATGCAATATATGTGGAAAGAG...GACCCTCTGCAGGTACCGTCTGGAGACCTTTAGTGAATCCAGGATAAGCGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS GCA 90 bp CATGGTGGCGATCCAGTGACAGCGGATACGATGTGTTTAGCACAATaGCTGGTGTCTAATCCTCAGAGCCCGTGCATTCAACAAAGATAT +
Preference number: 5 (lower is better)
Translates to: HGGDPVTADTMCLAQ*LVSNPQSPCIQQRY
Trigger: ATATCTTTGTTGAATGCACGGGCTCTGAGGATTAGACACCAGGCATTGTGCTAAACACATCGTATCCGCTGTCACTGGATCGCCACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000478513.1
CDS-3UTR CAA 90 bp CTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCGCTCAGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: LGTAMLCHTMVQPQQYRSDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...TGAGCGGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp CACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTTGTCGGCCATCTTCCTaGGCAAACGTGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: HQRSCIRGWSLIDDKLVFCRPSS*ANVNGR
Trigger: CCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACA...AAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGAGATGTCTCGCAGAGGGAAGTCCACGATGGGGTACACCACCGAGTTTTCATCATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: RDVSQREVHDGVHHRVFIIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...GATGAAAACTCGGTGGTGTACCCCATCGTGGACTTCCCTCTGCGAGACATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAATGGCAGGCTCTGGGGATTAGGGCCAGATATTaGTGTGTATCCTTGAACATT +
Preference number: 5 (lower is better)
Translates to: TQRVSAIFLGKREWQALGIRARY*CVSLNI
Trigger: AATGTTCAAGGATACACACAAATATCTGGCCCTAAT...CCCCAGAGCCTGCCATTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp TTGGCTTTAGCAAGGAGCTCCCTGGGGCAGTTGAGCCGGTGCTCAGACACAAACATTAGGGCCAGATATTaGTGTGTATCCTTGAACATT +
Preference number: 5 (lower is better)
Translates to: LALARSSLGQLSRCSDTNIRARY*CVSLNI
Trigger: AATGTTCAAGGATACACACAAATATCTGGCCCTAAT...GTTTGTGTCTGAGCACCGGCTCAACTGCCCCAGGGAGCTCCTTGCTAAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTACCACGATGGGTGTATaGTCGATATGCACAAATGCC +
Preference number: 5 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLTTMGV*SICTNA
Trigger: GGCATTTGTGCATATCGACAATACACCCATCGTGGT...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000455157.6
CDS-3UTR CAA 90 bp GCAGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATATTAACCAACCCAACCTaGAGTATTTTTACTCCTCAC +
Preference number: 5 (lower is better)
Translates to: AGSGDSHAMSHDGTATAILTNPT*SIFTPH
Trigger: GTGAGGAGTAAAAATACTCAAGGTTGGGTTGGTTAA...TATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS CCA 90 bp CCCGGGATCAGAAAGAAAGCAGGTCATTTGCAATCTATCGGAGCCTaGAGGACTGTGGGTATTAGGTGTCTAAGAAGAAAGCTCAGATCT +
Preference number: 5 (lower is better)
Translates to: PGIRKKAGHLQSIGA*RTVGIRCLRRKLRS
Trigger: AGATCTGAGCTTTCTTCTTAGACACCTAATACCCACAGTCCTCCAGGCTCCGATAGATTGCAAATGACCTGCTTTCTTTCTGATCCCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS CCA 90 bp ATGGCAGGGTCTACACGTCCTGTGACATTAGCAGTAACGTTTTCCTaGATATTACAATCCACGGTGGTCACACAGCATGTTGACGGGATT +
Preference number: 5 (lower is better)
Translates to: MAGSTRPVTLAVTFS*ILQSTVVTQHVDGI
Trigger: AATCCCGTCAACATGCTGTGTGACCACCGTGGATTGTAATATCCAGGAAAACGTTACTGCTAATGTCACAGGACGTGTAGACCCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000464494.1
CDS-3UTR CAA 90 bp CATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: HGFHQRSCIRGWSLIDDKKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...CTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TTATCCTTCCTTCACAGCAGCCCTAAGAGGTACTATTACAAGGCCCATTTTCTTCCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 5 (lower is better)
Translates to: LSFLHSSPKRYYYKAHFLPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...AAGAAAATGGGCCTTGTAATAGTACCTCTTAGGGCTGCTGTGAAGGAAGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CAA 90 bp ACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTGTTTGCTTGGCTTTGCGCTaGGCTCCGCAGCAGGATGGG +
Preference number: 5 (lower is better)
Translates to: TWRPEAKSLPFKLFLSFVCLALR*APQQDG
Trigger: CCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCA...AACAAATGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp TGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: CPMQPTVNTLRECRPSSLIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...CAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCCCAGAGGCAAAGTCCTaGCCATTTAAATTATTTCTC +
Preference number: 5 (lower is better)
Translates to: SNAANSEHTQRVSAIFLGPEAKS*PFKLFL
Trigger: GAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGG...GCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
CDS-3UTR CAA 90 bp ACCGCTCAGGATAGTCCACCGCATACACCTGGTGGTCAGTGCCATAGATGTAGTCCAGAGGCAAAGTCCTaGCCATTTAAATTATTTCTC +
Preference number: 5 (lower is better)
Translates to: TAQDSPPHTPGGQCHRCSPEAKS*PFKLFL
Trigger: GAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGG...ACTACATCTATGGCACTGACCACCAGGTGTATGCGGTGGACTATCCTGAGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
CDS-3UTR CAA 90 bp TTGTCCAATGCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGCCTTTAGGTGGTTTTaGATATTCACTTCCCAACCC +
Preference number: 5 (lower is better)
Translates to: LSNAANSEHTQRVSAIFLAFRWF*IFTSQP
Trigger: GGGTTGGGAAGTGAATATCAAAAACCACCTAAAGGC...AAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGCATTGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp AGGCTCTGGGGACAGCCATGCTATGTCACACGATGGTACAGCCACAGCAATACCCAAAGCCAATTTGAATaGGATTCCTTTCACTTGCAA +
Preference number: 5 (lower is better)
Translates to: RLWGQPCYVTRWYSHSNTQSQFE*DSFHLQ
Trigger: TTGCAAGTGAAAGGAATCCAATTCAAATTGGCTTTG...GGTATTGCTGTGGCTGTACCATCGTGTGACATAGCATGGCTGTCCCCAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp TATGAGTCATGGATTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGAAAGAGGTTTTCTCCTTaGGCTTTAGCAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: YESWIPPEELYKGLELDRKRFSP*ALARSS
Trigger: GGAGCTCCTTGCTAAAGCCAAAGGAGAAAACCTCTT...TCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAATCCATGACTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTGAAGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: ANSEHTQRVSAIFLGKREDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...TTCACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp GCAGCCAACAGTGAACACACTCAGAGAGTGTCGGCCATCTTCCTTGGCAAACGTATTAGGGCCAGATATTaGTGTGTATCCTTGAACATT +
Preference number: 5 (lower is better)
Translates to: AANSEHTQRVSAIFLGKRIRARY*CVSLNI
Trigger: AATGTTCAAGGATACACACAAATATCTGGCCCTAAT...ACGTTTGCCAAGGAAGATGGCCGACACTCTCTGAGTGTGTTCACTGTTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp CCTCAATGGGCATGGGATCCAGTATTCATCCATCTACCATGCATCATCCGTCTGACTATGATAGGCATGTaGCTTCCATGTTATCCTTCC +
Preference number: 5 (lower is better)
Translates to: PQWAWDPVFIHLPCIIRLTMIGM*LPCYPS
Trigger: GGAAGGATAACATGGAAGCAACATGCCTATCATAGT...CAGACGGATGATGCATGGTAGATGGATGAATACTGGATCCCATGCCCATTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS TCA 90 bp TGCCAAAAAGATTCAGGTGGTCAAACTCACACACACAAAGTAGAGTaGTGGTTGACAGGGGTGTCATCTTCATTCAGATCCCTGTCCATG +
Preference number: 5 (lower is better)
Translates to: CQKDSGGQTHTHKVE*WLTGVSSSFRSLSM
Trigger: CATGGACAGGGATCTGAATGAAGATGACACCCCTGTCAACCATCACTCTACTTTGTGTGTGTGAGTTTGACCACCTGAATCTTTTTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483845.1
CDS GCA 90 bp CCAACAACTGGTTTCCATAGGTACCACAGGGGACACACAGGTAACTaGATTGGGACATCAGTAGTAACATCTCTTCAGGACAATACGAAT +
Preference number: 5 (lower is better)
Translates to: PTTGFHRYHRGHTGN*IGTSVVTSLQDNTN
Trigger: ATTCGTATTGTCCTGAAGAGATGTTACTACTGATGTCCCAATGCAGTTACCTGTGTGTCCCCTGTGGTACCTATGGAAACCAGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000464494.1
CDS GCA 90 bp CTTAGTAATGATGCGTGTCCCAAGACAATGTTGTTTTCTTCTAGCTaGACTGCACAAAGGAGGGAACTGCTTTCTGCATTGGGACATCAG +
Preference number: 5 (lower is better)
Translates to: LSNDACPKTMLFSSS*TAQRRELLSALGHQ
Trigger: CTGATGTCCCAATGCAGAAAGCAGTTCCCTCCTTTGTGCAGTGCAGCTAGAAGAAAACAACATTGTCTTGGGACACGCATCATTACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp GACCTGGAACTTCCTGGTGTCTTCCTGAAACATCGGAGGACCTTGAACCTTGATCCAGAGGCAAAGTCCTaGCCATTTAAATTATTTCTC +
Preference number: 5 (lower is better)
Translates to: DLELPGVFLKHRRTLNLDPEAKS*PFKLFL
Trigger: GAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGG...ATCAAGGTTCAAGGTCCTCCGATGTTTCAGGAAGACACCAGGAAGTTCCAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413305.5
ENST00000420394.5
ENST00000455157.6
CDS GCA 90 bp ACGATGTGTTTAGCACAATGCCTGGTGTCTAATCCTCAGAGCCCGTaGATTCAACAAAGATATAACTGGCAAATGTTACCTCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: TMCLAQCLVSNPQSP*IQQRYNWQMLPLPP
Trigger: TGGAGGAAGAGGTAACATTTGCCAGTTATATCTTTGTTGAATGCACGGGCTCTGAGGATTAGACACCAGGCATTGTGCTAAACACATCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000478513.1
CDS-3UTR CAA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCCTGTCCTCTGCCCCCTaGAAGAAGCCAGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: RYLCVSLNISVILRSSRGLSSAP*KKPVIA
Trigger: AGCTATGACTGGCTTCTTCAAGGGGGCAGAGGACAG...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCAAAACATCGGAGGACCTaGAACCTTGATGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: RRSTPEPRPTKGKSKIKSKHRRT*NLDVPE
Trigger: CTCTGGGACATCAAGGTTCAAGGTCCTCCGATGTTT...TGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCCCACGCCCATGGCATTaGTGGCATTCCTTGACCAGT +
Preference number: 5 (lower is better)
Translates to: RYLCVSLNISVILRSSRGPRPWH*WHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGG...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp ATTCCCAAGTCCATATCATGTCTTTCCAGCTGGGTTGGAAGAATCTGCTGGAGGGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: IPKSISCLSSWVGRICWRDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...CCTCCAGCAGATTCTTCCAACCCAGCTGGAAAGACATGATATGGACTTGGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp TTCCACCAGAGGAGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTACTATGATAGGCATGTaGCTTCCATGTTATCCTTCC +
Preference number: 5 (lower is better)
Translates to: FHQRSCIRGWSLIDDKLVTMIGM*LPCYPS
Trigger: GGAAGGATAACATGGAAGCAACATGCCTATCATAGT...AACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCTCCTCTGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317371.8
ENST00000435138.5
ENST00000455157.6
CDS GCA 90 bp AGACAATGTTGTTTTCTTCTAGCTGCACTGCACAAAGGAGGGAACTaGTTTCTGCATTGGGACATCAGTAGTAACATCTCTTCAGGACAA +
Preference number: 5 (lower is better)
Translates to: RQCCFLLAALHKGGN*FLHWDISSNISSGQ
Trigger: TTGTCCTGAAGAGATGTTACTACTGATGTCCCAATGCAGAAAGCAGTTCCCTCCTTTGTGCAGTGCAGCTAGAAGAAAACAACATTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp TTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACCAGAACGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: FSNTQIVKRLPLEEAHQNDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...GTTCTGGTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp AGAAGAAGCACACCAGAACCAAGACCGACAAAGGGAAAAAGCAAAATCAAATCAAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: RRSTPEPRPTKGKSKIKSRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...TGATTTGATTTTGCTTTTTCCCTTTGTCGGTCTTGGTTCTGGTGTGCTTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp GAACATTTCAGTAATACTCAGATCGTCAAGAGGCTCCCACTAGAAGAAGCACACATAAGGGGTTGGAGCTaGATAGATGATAAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: EHFSNTQIVKRLPLEEAHIRGWS*IDDKLV
Trigger: AACCAGCTTATCATCTATCAAGCTCCAACCCCTTAT...GTGTGCTTCTTCTAGTGGGAGCCTCTTGACGATCTGAGTATTACTGAAATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp ATCGGGGCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCACAATTCTGCACACTaGTATCTCCAGCATCCTCCA +
Preference number: 5 (lower is better)
Translates to: IGALTWRPEAKSLPFKLFHNSAH*YLQHPP
Trigger: TGGAGGATGCTGGAGATACAAGTGTGCAGAATTGTG...AAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGCCCCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413305.5
CDS-3UTR CAA 90 bp TTATCCTTCCTTCACAGCAGCCCTAAGAGGTACTATTACAAGGCCCATTTTCTTGATTCTACTGTCGATTaGAAAGCCATCTCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LSFLHSSPKRYYYKAHFLDSTVD*KAISVG
Trigger: ACCCACTGAGATGGCTTTCAAATCGACAGTAGAATC...AAGAAAATGGGCCTTGTAATAGTACCTCTTAGGGCTGCTGTGAAGGAAGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435138.5
CDS-3UTR CAA 90 bp TCTTTCTTCACACTCTTTCCACATATATTGCATGACGAGTTCCAGCCTTGTCCATGTCCCAAGACAATGTaGTTTTCTTCTAGCTGCACT +
Preference number: 5 (lower is better)
Translates to: SFFTLFPHILHDEFQPCPCPKTM*FSSSCT
Trigger: AGTGCAGCTAGAAGAAAACAACATTGTCTTGGGACA...TGGACAAGGCTGGAACTCGTCATGCAATATATGTGGAAAGAGTGTGAAGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS-3UTR CAA 90 bp AGCTGTATAAGGGGTTGGAGCTTGATAGATGATAAGCTGGTTTTTCTGGAAGGAGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: SCIRGWSLIDDKLVFLEGDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...TCCTTCCAGAAAAACCAGCTTATCATCTATCAAGCTCCAACCCCTTATACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317371.8
ENST00000341795.7
ENST00000413305.5
ENST00000415132.5
ENST00000420394.5
ENST00000435138.5
ENST00000455157.6
CDS-3UTR CAA 90 bp AGATATTTGTGTGTATCCTTGAACATTTCAGTAATACTCAGATCGTCAAGAGGCAGGACATGCCAGGGTTaGTATGTGATTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: RYLCVSLNISVILRSSRGRTCQG*YVIVQC
Trigger: GCATTGGACAATCACATACAAACCCTGGCATGTCCT...GCCTCTTGACGATCTGAGTATTACTGAAATGTTCAAGGATACACACAAATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp ACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCATTTGTTGTGGTTAGTAAAGGGTaGAAATGTCCACTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: TWRPEAKSLPFKLFLSFVVVSKG*KCPLAY
Trigger: ATAAGCGAGTGGACATTTCAACCCTTTACTAACCAC...AACAAATGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS-3UTR CAA 90 bp GCATTAACTTGGAGACCAGAGGCAAAGTCCTTGCCATTTAAATTATTTCTCTCAGACATAAGTCTTTCCTaGGTACCAATAGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: ALTWRPEAKSLPFKLFLSDISLS*VPIVNF
Trigger: GAAGTTCACTATTGGTACCAAGGAAAGACTTATGTC...TGAGAGAAATAATTTAAATGGCAAGGACTTTGCCTCTGGTCTCCAAGTTAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341795.7
ENST00000413305.5
ENST00000420394.5
CDS CCA 72 bp AGGTCTTGGCCCTCTTACAGGACCGTGCCCGCCCCGTaGCAGCCGCTGCACTTGTACCGCCCACGCCCATGG +
Preference number: 6 (lower is better)
Translates to: RSWPSYRTVPAP*QPLHLYRPRPW
Trigger: CCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTCCTGTAAGAGGGCCAAGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS GCA 72 bp CCTCTTACAGGACCGTGCCCGCCCCGTGGCAGCCGCTaGACTTGTACCGCCCACGCCCATGGCATTTGTGGC +
Preference number: 6 (lower is better)
Translates to: PLTGPCPPRGSR*TCTAHAHGICG
Trigger: GCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTCCTGTAAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS TCA 72 bp CCCAGGGCTGATGGCAGCGCCCATGGAGACTCACCCTaGGGACCGTGGGTGGGACGACAGACAGGGACCCTA +
Preference number: 6 (lower is better)
Translates to: PRADGSAHGDSP*GPWVGRQTGTL
Trigger: TAGGGTCCCTGTCTGTCGTCCCACCCACGGTCCTCAGGGTGAGTCTCCATGGGCGCTGCCATCAGCCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495366.5
CDS GCA 72 bp CCGCGCACAGCTGACATCTCCGGGACTGCTTGGCTTTaGGCTTGGCTCCGCAGCAGGATGGGCACCGCACCT +
Preference number: 6 (lower is better)
Translates to: PRTADISGTAWL*AWLRSRMGTAP
Trigger: AGGTGCGGTGCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGTGCGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS CAA 72 bp TACAGGACCGTGCCCGCCCCGTGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGGCATTTGTGGCATTCC +
Preference number: 6 (lower is better)
Translates to: YRTVPAPWQPLH*YRPRPWHLWHS
Trigger: GGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTCCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS CAA 90 bp TGGCCCTCTTACAGGACCGTGCCCGCCCCGTGGCAGCCGCTGCACTaGTACCGCCCACGCCCATGGCATTTGTGGCATTCCTTGACCAGT +
Preference number: 6 (lower is better)
Translates to: WPSYRTVPAPWQPLH*YRPRPWHLWHSLTS
Trigger: ACTGGTCAAGGAATGCCACAAATGCCATGGGCGTGGGCGGTACAAGTGCAGCGGCTGCCACGGGGCGGGCACGGTCCTGTAAGAGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS GCA 72 bp TTCTTCCTGTGTTCCAGGAACGAGGGCCAGGACCTTTaGTCCTGGGGCCTCCCTGGGGCCTCCAAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: FFLCSRNEGQDL*SWGLPGASKGG
Trigger: CCCACCTTTGGAGGCCCCAGGGAGGCCCCAGGAGCAAAGGTCCTGGCCCTCGTTCCTGGAACACAGGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000495366.5
CDS CCA 72 bp ACAGCTGACATCTCCGGGACTGCTTGGCTTTGCGCTTaGCTCCGCAGCAGGATGGGCACCGCACCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: TADISGTAWLCA*LRSRMGTAPAQ
Trigger: CTGAGCAGGTGCGGTGCCCATCCTGCTGCGGAGCCAAGCGCAAAGCCAAGCAGTCCCGGAGATGTCAGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS CCA 72 bp CACACAGAGGGGCCCGTCTGTCTTCAGATCCATGGATaGCAGCACAAGAGACACTGTGGGCTGGAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: HTEGPVCLQIHG*QHKRHCGLERP
Trigger: TGGCCTCTCCAGCCCACAGTGTCTCTTGTGCTGCCATCCATGGATCTGAAGACAGACGGGCCCCTCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000495366.5
CDS GCA 72 bp AGGCCCAAGAAGCGCTTGAACTCGGGAGGCGGAGGTTaGAGTGAGCCCGGATTTTGCCTGTATACTCCAACC +
Preference number: 6 (lower is better)
Translates to: RPKKRLNSGGGG*SEPGFCLYTPT
Trigger: GGTTGGAGTATACAGGCAAAATCCGGGCTCACTGCAACCTCCGCCTCCCGAGTTCAAGCGCTTCTTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478513.1
CDS TCA 72 bp CAAGAAGCGCTTGAACTCGGGAGGCGGAGGTTGCAGTaGGCCCGGATTTTGCCTGTATACTCCAACCCAAGG +
Preference number: 6 (lower is better)
Translates to: QEALELGRRRLQ*ARILPVYSNPR
Trigger: CCTTGGGTTGGAGTATACAGGCAAAATCCGGGCTCACTGCAACCTCCGCCTCCCGAGTTCAAGCGCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478513.1
CDS TCA 72 bp GGAAGTCCCTTCCCTGAGGCCATGCCACCCCCTTACTaGAGTCTTTCTGGCCCCAACACCTCCAAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: GSPFPEAMPPPY*SLSGPNTSKRK
Trigger: TTTCCTCTTGGAGGTGTTGGGGCCAGAAAGACTTCAGTAAGGGGGTGGCATGGCCTCAGGGAAGGGACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495366.5
CDS GCA 72 bp TCCATGGCAGCCCTGAGAGCCATTAATCCACAATTCTaGACACTTGTATCTCCAGCATCCTCCAGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: SMAALRAINPQF*TLVSPASSSPG
Trigger: GCCAGGGCTGGAGGATGCTGGAGATACAAGTGTGCAGAATTGTGGATTAATGGCTCTCAGGGCTGCCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413305.5
ENST00000495366.5
CDS GCA 72 bp CTCAGCAGCCCGGGATCAGAAAGAAAGCAGGTCATTTaGAATCTATCGGAGCCTAAGGGCAGAAGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: LSSPGSERKQVI*NLSEPKGRRQV
Trigger: CACCTGCCTTCTGCCCTTAGGCTCCGATAGATTGCAAATGACCTGCTTTCTTTCTGATCCCGGGCTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455157.6
ENST00000464494.1
CDS CAA 72 bp CCTAGGAACAGCAGCAGCTTGGGCTCAACAGGGAGCTaGTTAGAAATACAGAGCCTTAGGCCCCACTCCAGA +
Preference number: 6 (lower is better)
Translates to: PRNSSSLGSTGS*LEIQSLRPHSR
Trigger: TCTGGAGTGGGGCCTAAGGCTCTGTATTTCTAACAAGCTCCCTGTTGAGCCCAAGCTGCTGCTGTTCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000478513.1
CDS GCA 72 bp GAACGCAGCCCAGGATCAGAAAGAAAGCAGGTCATTTaGAATCTAGCAGAGCCTAAGGGCAGAAGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: ERSPGSERKQVI*NLAEPKGRRQV
Trigger: CACCTGCCTTCTGCCCTTAGGCTCTGCTAGATTGCAAATGACCTGCTTTCTTTCTGATCCTGGGCTGCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS CCA 72 bp AGAAAGCTCAGAGCTGCCGAAAGCAGGTACCTTACTTaGGATTTACTATCTGACAGGGGTGGGAACGCAGCC +
Preference number: 6 (lower is better)
Translates to: RKLRAAESRYLT*DLLSDRGGNAA
Trigger: GGCTGCGTTCCCACCCCTGTCAGATAGTAAATCCCAAGTAAGGTACCTGCTTTCGGCAGCTCTGAGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS CAA 72 bp TTGTGTTGGTCAGCGGTGCCTAGGAACAGCAGCAGCTaGGGCTCAACAGGGAGCTTGTTAGAAATACAGAGC +
Preference number: 6 (lower is better)
Translates to: LCWSAVPRNSSS*GSTGSLLEIQS
Trigger: GCTCTGTATTTCTAACAAGCTCCCTGTTGAGCCCAAGCTGCTGCTGTTCCTAGGCACCGCTGACCAACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000478513.1
CDS TCA 72 bp TGCCGAAAGCAGGTACCTTACTTGGGATTTACTATCTaGCAGGGGTGGGAACGCAGCCCAGGATCAGAAAGA +
Preference number: 6 (lower is better)
Translates to: CRKQVPYLGFTI*QGWERSPGSER
Trigger: TCTTTCTGATCCTGGGCTGCGTTCCCACCCCTGTCAGATAGTAAATCCCAAGTAAGGTACCTGCTTTCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS TCA 72 bp GCACGACAAATGGAGTTGCTTGTTGGTTTCCCTGGCTaGCAAAGACTGCCTGGTAAGAAGAACCCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: ARQMELLVGFPG*QRLPGKKNPRS
Trigger: AGACCTGGGGTTCTTCTTACCAGGCAGTCTTTGTCAGCCAGGGAAACCAACAAGCAACTCCATTTGTCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492435.1
CDS GCA 72 bp CTCAGCAGCCCGGGATCAGAAAGAAAGCAGGTCATTTaGAATCTATCGGAGCCTGGAGGACTGTGGGTATTA +
Preference number: 6 (lower is better)
Translates to: LSSPGSERKQVI*NLSEPGGLWVL
Trigger: TAATACCCACAGTCCTCCAGGCTCCGATAGATTGCAAATGACCTGCTTTCTTTCTGATCCCGGGCTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS CAA 72 bp ACTCAGCAGCCCGGGATCAGAAAGAAAGCAGGTCATTaGCAATCTATCGGAGCCTGGAGGACTGTGGGTATT +
Preference number: 6 (lower is better)
Translates to: TQQPGIRKKAGH*QSIGAWRTVGI
Trigger: AATACCCACAGTCCTCCAGGCTCCGATAGATTGCAAATGACCTGCTTTCTTTCTGATCCCGGGCTGCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS GCA 72 bp GAACGCAGCCCAGGATCAGAAAGAAAGCAGGTCATTTaGAATCTATCGGAGCCTGGAGGACTGTGGGTTTTA +
Preference number: 6 (lower is better)
Translates to: ERSPGSERKQVI*NLSEPGGLWVL
Trigger: TAAAACCCACAGTCCTCCAGGCTCCGATAGATTGCAAATGACCTGCTTTCTTTCTGATCCTGGGCTGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS GCA 72 bp GATCCAGTGACAGCGGATACGATGTGTTTAGCACAATaGCTGGTGTCTAATCCTCAGAGCCCGTGCATTCAA +
Preference number: 6 (lower is better)
Translates to: DPVTADTMCLAQ*LVSNPQSPCIQ
Trigger: TTGAATGCACGGGCTCTGAGGATTAGACACCAGGCATTGTGCTAAACACATCGTATCCGCTGTCACTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000478513.1
CDS CCA 72 bp CAGGTCATTTGCAATCTATCGGAGCCTGGAGGACTGTaGGTTTTAGGTGTCCAAGAAGAAAGCTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: QVICNLSEPGGL*VLGVQEESSEL
Trigger: CAGCTCTGAGCTTTCTTCTTGGACACCTAAAACCCACAGTCCTCCAGGCTCCGATAGATTGCAAATGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS TCA 72 bp AGTACCTTACTTGGGATTTACTATCCCACAGGGGTCTaGACGCAGCCCAGGATCAGAAAGAAAGCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: STLLGIYYPTGV*TQPRIRKKAGH
Trigger: ATGACCTGCTTTCTTTCTGATCCTGGGCTGCGTTCAGACCCCTGTGGGATAGTAAATCCCAAGTAAGGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS GCA 72 bp ACATCCTCTGTACTCTTTGCAGTAATAGCATCCTCTTaGCCCTGGAGGACTGTGGGTATTAGGTGTCCAAGA +
Preference number: 6 (lower is better)
Translates to: TSSVLFAVIASS*PWRTVGIRCPR
Trigger: TCTTGGACACCTAATACCCACAGTCCTCCAGGGGCAAGAGGATGCTATTACTGCAAAGAGTACAGAGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000464494.1
CDS GCA 72 bp GATGCGTGTCCCAAGACAATGTTGTTTTCTTCTAGCTaGACTGCACAAAGGAGGGAACTGCTTTCTGCATTG +
Preference number: 6 (lower is better)
Translates to: DACPKTMLFSSS*TAQRRELLSAL
Trigger: CAATGCAGAAAGCAGTTCCCTCCTTTGTGCAGTGCAGCTAGAAGAAAACAACATTGTCTTGGGACACGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS CAA 72 bp TACAATCCACGGTGGTCACACAGCATGTTGACGGGATaGTCAGTAATATCTTCTCAGCCTCTGGAAATCACC +
Preference number: 6 (lower is better)
Translates to: YNPRWSHSMLTG*SVISSQPLEIT
Trigger: GGTGATTTCCAGAGGCTGAGAAGATATTACTGACAATCCCGTCAACATGCTGTGTGACCACCGTGGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000464494.1
CDS TCA 72 bp GATTCAGGTGGTCAAACTCACACACACAAAGTAGAGTaGTGGTTGACAGGGGTGTCATCTTCATTCAGATCC +
Preference number: 6 (lower is better)
Translates to: DSGGQTHTHKVE*WLTGVSSSFRS
Trigger: GGATCTGAATGAAGATGACACCCCTGTCAACCATCACTCTACTTTGTGTGTGTGAGTTTGACCACCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483845.1
CDS GCA 72 bp TGTTTTCTTCTAGCTGCACTGCACAAAGGAGGGAACTaGTTTCTGCATTGGGACATCAGTAGTAACATCTCT +
Preference number: 6 (lower is better)
Translates to: CFLLAALHKGGN*FLHWDISSNIS
Trigger: AGAGATGTTACTACTGATGTCCCAATGCAGAAAGCAGTTCCCTCCTTTGTGCAGTGCAGCTAGAAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS CCA 72 bp AGAAAGAAAGCAGGTCATTTGCAATCTATCGGAGCCTaGAGGACTGTGGGTATTAGGTGTCTAAGAAGAAAG +
Preference number: 6 (lower is better)
Translates to: RKKAGHLQSIGA*RTVGIRCLRRK
Trigger: CTTTCTTCTTAGACACCTAATACCCACAGTCCTCCAGGCTCCGATAGATTGCAAATGACCTGCTTTCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000470009.1
CDS CCA 72 bp TCTACACGTCCTGTGACATTAGCAGTAACGTTTTCCTaGATATTACAATCCACGGTGGTCACACAGCATGTT +
Preference number: 6 (lower is better)
Translates to: STRPVTLAVTFS*ILQSTVVTQHV
Trigger: AACATGCTGTGTGACCACCGTGGATTGTAATATCCAGGAAAACGTTACTGCTAATGTCACAGGACGTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317371.8
ENST00000464494.1
CDS GCA 72 bp TTAGCACAATGCCTGGTGTCTAATCCTCAGAGCCCGTaGATTCAACAAAGATATAACTGGCAAATGTTACCT +
Preference number: 6 (lower is better)
Translates to: LAQCLVSNPQSP*IQQRYNWQMLP
Trigger: AGGTAACATTTGCCAGTTATATCTTTGTTGAATGCACGGGCTCTGAGGATTAGACACCAGGCATTGTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435138.5
ENST00000478513.1
CDS CAA 90 bp ATTTACGGAAAAATTCTTAGTAATGATGCGTGTCCCAAGACAATGTaGTTTTCTTCTAGCTGCACTGCACAAAGGAGGGAACTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: IYGKILSNDACPKTM*FSSSCTAQRRELLS
Trigger: AGAAAGCAGTTCCCTCCTTTGTGCAGTGCAGCTAGAAGAAAACAACATTGTCTTGGGACACGCATCATTACTAAGAATTTTTCCGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS CAA 72 bp AAAATTCTTAGTAATGATGCGTGTCCCAAGACAATGTaGTTTTCTTCTAGCTGCACTGCACAAAGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: KILSNDACPKTM*FSSSCTAQRRE
Trigger: TTCCCTCCTTTGTGCAGTGCAGCTAGAAGAAAACAACATTGTCTTGGGACACGCATCATTACTAAGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455157.6
CDS CAA 90 bp GCTGATAGAATCCTGCAACTGAAGAAACACAACCTTAGAGAGGAATaGTACCATTTTATAGATAAGAAAAACAGAGGTCCAGAGAGGATG +
Preference number: 6 (lower is better)
Translates to: ADRILQLKKHNLREE*YHFIDKKNRGPERM
Trigger: CATCCTCTCTGGACCTCTGTTTTTCTTATCTATAAAATGGTACAATTCCTCTCTAAGGTTGTGTTTCTTCAGTTGCAGGATTCTATCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495366.5