RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SSU72 (Homo sapiens)

Ensembl gene IDs: ENSG00000160075

Ensembl transcript IDs: ENST00000291386.4, ENST00000359060.5, ENST00000378725.3, ENST00000378726.1

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTCCTTCTCAGCCCACGACGGGAGCAGAGCCATGTCGAAGCCGTaGCCCACACAGGGTGGACAAGGACATGGCCTGACAGCTCCTCAG +
Preference number: 1 (lower is better)
Translates to: CSFSAHDGSRAMSKP*PTQGGQGHGLTAPQ
Trigger: CTGAGGAGCTGTCAGGCCATGTCCTTGTCCACCCTGTGTGGGGCACGGCTTCGACATGGCTCTGCTCCCGTCGTGGGCTGAGAAGGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp CTGAGGCCCCACCCGGCATCGTGCCAGTGTCCACAGGGAACTGCCTaGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGCAAGAG +
Preference number: 1 (lower is better)
Translates to: LRPHPASCQCPQGTA*GLHSSPGQGHHVQE
Trigger: CTCTTGCACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGGACACTGGCACGATGCCGGGTGGGGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 90 bp GAGGGGCAGCAGGACGTGCTGCTGACAGTCCCTGGGGACTTACACTaGCTTGCAGTGAGAGCCCACATCTGCCACCAGGATGGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: EGQQDVLLTVPGDLH*LAVRAHICHQDGSQ
Trigger: CTGGGAGCCATCCTGGTGGCAGATGTGGGCTCTCACTGCAAGTCAGTGTAAGTCCCCAGGGACTGTCAGCAGCACGTCCTGCTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 90 bp GCAGCAGGACGTGCTGCTGACAGTCCCTGGGGACTTACACTGACTTaGAGTGAGAGCCCACATCTGCCACCAGGATGGCTCCCAGCACCA +
Preference number: 1 (lower is better)
Translates to: AAGRAADSPWGLTLT*SESPHLPPGWLPAP
Trigger: TGGTGCTGGGAGCCATCCTGGTGGCAGATGTGGGCTCTCACTGCAAGTCAGTGTAAGTCCCCAGGGACTGTCAGCAGCACGTCCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp CTTGGAATAGGCTCTGTGGCCACCCATCGCCGTAAGGCTCCGGGATaGAGACAGCATGGACAGGGACCTCGCACAAAGGCATGTCGGGAG +
Preference number: 1 (lower is better)
Translates to: LGIGSVATHRRKAPG*RQHGQGPRTKACRE
Trigger: CTCCCGACATGCCTTTGTGCGAGGTCCCTGTCCATGCTGTCTCCATCCCGGAGCCTTACGGCGATGGGTGGCCACAGAGCCTATTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 90 bp TGGCAAGAGTGCCAATACATAGACAATGCTGGGCAAGGCCAGAGATaGTGGTCAAGGGCGGGGATGTCGGGAGAGGGCGGGGATGGCAAC +
Preference number: 1 (lower is better)
Translates to: WQECQYIDNAGQGQR*WSRAGMSGEGGDGN
Trigger: GTTGCCATCCCCGCCCTCTCCCGACATCCCCGCCCTTGACCAGCATCTCTGGCCTTGCCCAGCATTGTCTATGTATTGGCACTCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp GGACTTACACTGACTTGCAGTGAGAGCCCACATCTGCCACCAGGATaGCTCCCAGCACCACCGCGTCACAAGCACCACACTCTCCACCGT +
Preference number: 1 (lower is better)
Translates to: GLTLTCSESPHLPPG*LPAPPRHKHHTLHR
Trigger: ACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGTGCTGGGAGCCATCCTGGTGGCAGATGTGGGCTCTCACTGCAAGTCAGTGTAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 90 bp ACAGGCCTGAGTCACCGCGCCGGCCCGTCCTTTGTCTTGACGCTGTaGACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTT +
Preference number: 1 (lower is better)
Translates to: TGLSHRAGPSFVLTL*TLDQVLRLIFGPHL
Trigger: AAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACAAAGGACGGGCCGGCGCGGTGACTCAGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp CAAGAGTGCCAATACATAGACAATGCTGGGCAAGGCCAGAGATGCTaGTCAAGGGCGGGGATGTCGGGAGAGGGCGGGGATGGCAACAGT +
Preference number: 1 (lower is better)
Translates to: QECQYIDNAGQGQRC*SRAGMSGEGGDGNS
Trigger: ACTGTTGCCATCCCCGCCCTCTCCCGACATCCCCGCCCTTGACCAGCATCTCTGGCCTTGCCCAGCATTGTCTATGTATTGGCACTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp CCACGACGGGAGCAGAGCCATGTCGAAGCCGTGCCCCACACAGGGTaGACAAGGACATGGCCTGACAGCTCCTCAGAAATCCTTAGAGAT +
Preference number: 1 (lower is better)
Translates to: PRREQSHVEAVPHTG*TRTWPDSSSEILRD
Trigger: ATCTCTAAGGATTTCTGAGGAGCTGTCAGGCCATGTCCTTGTCCACCCTGTGTGGGGCACGGCTTCGACATGGCTCTGCTCCCGTCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 90 bp CTTGAACCCCGTCTTGCTTCCACTGCAGTTTACGGCGATGACTTCTaGCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTCT +
Preference number: 1 (lower is better)
Translates to: LEPRLASTAVYGDDF*QRTGCCGADLLSGS
Trigger: AGAGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGCCGTAAACTGCAGTGGAAGCAAGACGGGGTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp CTTCCGGATGAGACTGCTGAAGCTGGACTCAGTCCTTGCAGAACGTaGCAAGTACTTCCCAGGTCTGGAACCCAGGAGGTCACAGTGGGC +
Preference number: 1 (lower is better)
Translates to: LPDETAEAGLSPCRT*QVLPRSGTQEVTVG
Trigger: GCCCACTGTGACCTCCTGGGTTCCAGACCTGGGAAGTACTTGCCACGTTCTGCAAGGACTGAGTCCAGCTTCAGCAGTCTCATCCGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp AAGAGCACACACACGCACGCGGGGTTCTTCTGGGCCGATGCTTCCTaGGAGATCACCAACCCCTACAGTCCCTCTGTAAAGGAGGAGCTT +
Preference number: 1 (lower is better)
Translates to: KSTHTHAGFFWADAS*EITNPYSPSVKEEL
Trigger: AAGCTCCTCCTTTACAGAGGGACTGTAGGGGTTGGTGATCTCCCAGGAAGCATCGGCCCAGAAGAACCCCGCGTGCGTGTGTGTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 90 bp TCCATGTGTATCAGGCACGCACGCACACACGCACGCACACCAACCTaGAAAGGAAATAACGGGGCAGCCCTGCAGTGTGAAAAGCAATGG +
Preference number: 1 (lower is better)
Translates to: SMCIRHARTHARTPT*KGNNGAALQCEKQW
Trigger: CCATTGCTTTTCACACTGCAGGGCTGCCCCGTTATTTCCTTTGCAGGTTGGTGTGCGTGCGTGTGTGCGTGCGTGCCTGATACACATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp GAACGTGGCAAGTACTTCCCAGGTCTGGAACCCAGGAGGTCACAGTaGGCTGACATGAAGGGGCTGAGCTTACACCAATCAAGGGAGTGT +
Preference number: 1 (lower is better)
Translates to: ERGKYFPGLEPRRSQ*ADMKGLSLHQSREC
Trigger: ACACTCCCTTGATTGGTGTAAGCTCAGCCCCTTCATGTCAGCCCACTGTGACCTCCTGGGTTCCAGACCTGGGAAGTACTTGCCACGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 90 bp CAGAGCCATGTCGAAGCCGTGCCCCACACAGGGTGGACAAGGACATaGCCTGACAGCTCCTCAGAAATCCTTAGAGATTTTTCCAAACGC +
Preference number: 1 (lower is better)
Translates to: QSHVEAVPHTGWTRT*PDSSSEILRDFSKR
Trigger: GCGTTTGGAAAAATCTCTAAGGATTTCTGAGGAGCTGTCAGGCCATGTCCTTGTCCACCCTGTGTGGGGCACGGCTTCGACATGGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 90 bp AGCTTCCGAATTCTGGGACACTGGGCTCAGCTCCTTCTTTTAGAATaGCCAGAGACAGGCTCATCCTCTGCCTATACCAAGTCCTTCCGG +
Preference number: 1 (lower is better)
Translates to: SFRILGHWAQLLLLE*PETGSSSAYTKSFR
Trigger: CCGGAAGGACTTGGTATAGGCAGAGGATGAGCCTGTCTCTGGTCATTCTAAAAGAAGGAGCTGAGCCCAGTGTCCCAGAATTCGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 90 bp GGCTCAGCTCCTTCTTTTAGAATGACCAGAGACAGGCTCATCCTCTaGCTATACCAAGTCCTTCCGGATGAGACTGCTGAAGCTGGACTC +
Preference number: 1 (lower is better)
Translates to: GSAPSFRMTRDRLIL*LYQVLPDETAEAGL
Trigger: GAGTCCAGCTTCAGCAGTCTCATCCGGAAGGACTTGGTATAGGCAGAGGATGAGCCTGTCTCTGGTCATTCTAAAAGAAGGAGCTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 90 bp TTTCTTCTAACAGCTTGGTTAGCAAGCTCCGCCCTCTTCTTTATCTaGCCTTCTAACGACCTCACCAGATGTGTGAAGCAGCCCGGCTCC +
Preference number: 1 (lower is better)
Translates to: FLLTAWLASSALFFI*PSNDLTRCVKQPGS
Trigger: GGAGCCGGGCTGCTTCACACATCTGGTGAGGTCGTTAGAAGGTCAGATAAAGAAGAGGGCGGAGCTTGCTAACCAAGCTGTTAGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 90 bp GAGGGAGGGAAGGCAGGCACACGAAGACACAGGTATGTCGGGAAGTaGACACAAACCGTTGTCTTTCCTTTTTGGTTAAAGAAGAAAAAC +
Preference number: 1 (lower is better)
Translates to: EGGKAGTRRHRYVGK*TQTVVFPFWLKKKN
Trigger: GTTTTTCTTCTTTAACCAAAAAGGAAAGACAACGGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCCTTCCCTCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291386.4
3UTR GCA 90 bp GATTGCTTTCATCTGGCGTTTTGGCATCTCCTCTCCCATTTCATATaGACAGTTTATTTGGGTAATGCTACCGTCACCAGCAGAACACCT +
Preference number: 1 (lower is better)
Translates to: DCFHLAFWHLLSHFI*TVYLGNATVTSRTP
Trigger: AGGTGTTCTGCTGGTGACGGTAGCATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACGCCAGATGAAAGCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
3UTR GCA 90 bp AATAAGATCCAGAAACTTTCCATTAGCGTGGGGGTGACCATGAAATaGCTGGTCAAAAACCCGGGCACTGATTGTCATAACCATTATGCA +
Preference number: 1 (lower is better)
Translates to: NKIQKLSISVGVTMK*LVKNPGTDCHNHYA
Trigger: TGCATAATGGTTATGACAATCAGTGCCCGGGTTTTTGACCAGGCATTTCATGGTCACCCCCACGCTAATGGAAAGTTTCTGGATCTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCGCACTCCAGCCGGGGTaGCACAGTGAGACTCTGCTG +
Preference number: 2 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSALQPG*HSETLL
Trigger: CAGCAGAGTCTCACTGTGTCACCCCGGCTGGAGTGC...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCGCCATGTCGAAGCCGTaGCCCACACAGGGTGGACAA +
Preference number: 2 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLAMSKP*PTQGGQ
Trigger: TTGTCCACCCTGTGTGGGGCACGGCTTCGACATGGC...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCGGCCACCACAGGCAATaGCTTTCCCACACGAGGTCC +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPGHHRQ*LSHTRS
Trigger: GGACCTCGTGTGGGAAAGGCATTGCCTGTGGTGGCC...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGCTGACAGCAGACGCCTaGGACTCTGCCCAGCGTCCT +
Preference number: 2 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVLTADA*DSAQRP
Trigger: AGGACGCTGGGCAGAGTCCCAGGCGTCTGCTGTCAG...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCGTGCCCCACACAGGGTaGACAAGGACATGGCCTGAC +
Preference number: 2 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSVPHTG*TRTWPD
Trigger: GTCAGGCCATGTCCTTGTCCACCCTGTGTGGGGCAC...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGCACGCGGGGTTCTTCTaGGCCGATGCTTCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVHAGFF*ADASWE
Trigger: CTCCCAGGAAGCATCGGCCCAGAAGAACCCCGCGTG...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCGCCCGTCCTTTGTCTTaGCGCTGTGAACACTCGACC +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPARPLS*RCEHST
Trigger: GGTCGAGTGTTCACAGCGTCAAGACAAAGGACGGGC...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGCAAGGCCAGAGATGCTaGTCAAGGGCGGGGATGTCG +
Preference number: 2 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVQGQRC*SRAGMS
Trigger: CGACATCCCCGCCCTTGACCAGCATCTCTGGCCTTG...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCAGCTACCCAGGAGGCTaGAGCAGGAGAATCACTGGA +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPSYPGG*SRRITG
Trigger: TCCAGTGATTCTCCTGCTTCAGCCTCCTGGGTAGCT...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCCCTTGGGCAACAGGGTaGGACTCTGACTCCATCTCA +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPPWATG*DSDSIS
Trigger: TGAGATGGAGTCAGAGTCTCACCCTGTTGCCCAAGG...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCGGGGTGACCATGAAATaGCTGGTCAAAAACCCGGGC +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPGVTMK*LVKNPG
Trigger: GCCCGGGTTTTTGACCAGGCATTTCATGGTCACCCC...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGCCATTCTGCACCTTCTaGCCCCACCTAGGGGGCAAA +
Preference number: 2 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVPFCTF*PHLGGK
Trigger: TTTGCCCCCTAGGTGGGGGCAGAAGGTGCAGAATGG...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCCACTCGACCAAGTGCTaGGTCTTATCTTTGGGCCGC +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPHSTKC*VLSLGR
Trigger: GCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTG...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCGCTGCTGACAGTCCCTaGGGACTTACACTGACTTGC +
Preference number: 2 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSAADSP*GLTLTC
Trigger: GCAAGTCAGTGTAAGTCCCCAGGGACTGTCAGCAGC...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCGGGCAGAAGGTACAGTaGTGGCTAGGATGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSGQKVQ*WLGCSS
Trigger: AGAACTGCATCCTAGCCATCACTGTACCTTCTGCCC...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCGACAAGGACATGGCCTaGCAGCTCCTCAGAAATCCT +
Preference number: 2 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLDKDMA*QLLRNP
Trigger: AGGATTTCTGAGGAGCTGTCAGGCCATGTCCTTGTC...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCGACAGGCTCATCCTCTaGCTATACCAAGTCCTTCCG +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPDRLIL*LYQVLP
Trigger: CGGAAGGACTTGGTATAGGCAGAGGATGAGCCTGTC...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCAGTACTTCCCAGGTCTaGAACCCAGGAGGTCACAGT +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPSTSQV*NPGGHS
Trigger: ACTGTGACCTCCTGGGTTCCAGACCTGGGAAGTACT...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCAGCCGGGCTGGGGAGCTaGCAGCAGACGCCTGGGACT +
Preference number: 2 (lower is better)
Translates to: CLDAVNTRPSAASYLWAAAGLGS*QQTPGT
Trigger: AGTCCCAGGCGTCTGCTGTCAGCTCCCCAGCCCGGC...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCCGGGGATGGCAACAGTaGCAACACGAAGATAAAAGG +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPRGWQQ*QHEDKR
Trigger: CCTTTTATCTTCGTGTTGGCACTGTTGCCATCCCCG...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCCCGGGAGGTGGATGTTaGAGTGAGTCTGCAGTGAGC +
Preference number: 2 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSPGGGC*SESAVS
Trigger: GCTCACTGCAGACTCACTGCAACATCCACCTCCCGG...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCGCTGGACTCAGTCCTTaGAGAACGTGGCAAGTACTT +
Preference number: 2 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLAGLSP*RTWQVL
Trigger: AAGTACTTGCCACGTTCTGCAAGGACTGAGTCCAGC...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCTAAACCAGACTCTTaGAATAGGCTCTGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLPKPDS*NRLCGH
Trigger: GTGGCCACAGAGCCTATTCCAAGAGTCTGGTTTAGG...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGGCCCTCTTCTTTATCTaGCCTTCTAACGACCTCACC +
Preference number: 2 (lower is better)
Translates to: TTASQAPHSPPWDAQMARALFFI*PSNDLT
Trigger: GGTGAGGTCGTTAGAAGGTCAGATAAAGAAGAGGGC...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGCCTGGGGACTTACACTaGCTTGCAGTGAGAGCCCAC +
Preference number: 2 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVPGDLH*LAVRAH
Trigger: GTGGGCTCTCACTGCAAGTCAGTGTAAGTCCCCAGG...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGGAGGTCACAGTGGGCTaGCATGAAGGGGCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVEVTVG*HEGAEL
Trigger: AAGCTCAGCCCCTTCATGTCAGCCCACTGTGACCTC...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCAAGCAGAGCCCGTGGCTaGCAGTGTCCCAGCGCCACC +
Preference number: 2 (lower is better)
Translates to: CLDAVNTRPSAASYLWAASRARG*QCPSAT
Trigger: GGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCT...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCGGGGATGGCAAGAGTaGCAATACATAGACAATGCT +
Preference number: 2 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSRGWQE*QYIDNA
Trigger: AGCATTGTCTATGTATTGGCACTCTTGCCATCCCCG...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGGGACTTACACTGACTTaGAGTGAGAGCCCACATCTG +
Preference number: 2 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVGLTLT*SESPHL
Trigger: CAGATGTGGGCTCTCACTGCAAGTCAGTGTAAGTCC...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGGCAGGCTTCCCATTCTaGACCTTCTGCCCCCACCTA +
Preference number: 2 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVAGFPF*TFCPHL
Trigger: TAGGTGGGGGCAGAAGGTGCAGAATGGGAAGCCTGC...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCATACATAGACAATGCTaGGCAAGGCCAGAGATGCTG +
Preference number: 2 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPIHRQC*ARPEML
Trigger: CAGCATCTCTGGCCTTGCCCAGCATTGTCTATGTAT...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCGTAATCCCAGCACTTTaGGAGGACGAGGAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSVIPAL*EDEEGG
Trigger: TCCACCCTCCTCGTCCTCCCAAAGTGCTGGGATTAC...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCTTTTAACTGTAACTaGCAGAGGAGACAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLPFNCN*QRRQQG
Trigger: TCCCTGCTGTCTCCTCTGCCAGTTACAGTTAAAAGG...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGTGGGCCGATGCTTCCTaGGAGATCACCAACCCCTAC +
Preference number: 2 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVWADAS*EITNPY
Trigger: GTAGGGGTTGGTGATCTCCCAGGAAGCATCGGCCCA...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTGCCGGGGTGACACAGTaGGACTCTGCTGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLAAGVTQ*DSAGKG
Trigger: CCCTTTCCCAGCAGAGTCTCACTGTGTCACCCCGGC...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGCATTTGGAATACGTTTaGCCTGGCCTCCGTTCTGAA +
Preference number: 2 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVHLEYV*PGLRSE
Trigger: TTCAGAACGGAGGCCAGGCCAAACGTATTCCAAATG...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCAAGCAGGAGAATCACTaGAACCCGGGAGGTGGATGT +
Preference number: 2 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSKQENH*NPGGGC
Trigger: ACATCCACCTCCCGGGTTCCAGTGATTCTCCTGCTT...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTGGGATGGAGACAGCATaGACAGGGACCTCGCACAAA +
Preference number: 2 (lower is better)
Translates to: AMTSANAPAAVGQICFRAGMETA*TGTSHK
Trigger: TTTGTGCGAGGTCCCTGTCCATGCTGTCTCCATCCC...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGAGAGCTTTAGCTAAGTaGCAGGCTTCCCATTCTGCA +
Preference number: 2 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVRALAK*QASHSA
Trigger: TGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCT...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCAACATCTCAACACCCCTaGGGCCCCACCCGGCATCGT +
Preference number: 2 (lower is better)
Translates to: CLDAVNTRPSAASYLWAATSQHP*GPTRHR
Trigger: ACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGT...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTATAACGGGGCAGCCCTaGAGTGTGAAAAGCAATGGG +
Preference number: 2 (lower is better)
Translates to: AMTSANAPAAVGQICFRAITGQP*SVKSNG
Trigger: CCCATTGCTTTTCACACTGCAGGGCTGCCCCGTTAT...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCTCACCTAAGCATCCCTaGTCTACGCTATGTCACGAC +
Preference number: 2 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSSPKHP*STLCHD
Trigger: GTCGTGACATAGCGTAGACCAGGGATGCTTAGGTGA...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGCAGTGTGAAAAGCAATaGGATTTTGTGGGTTCCACC +
Preference number: 2 (lower is better)
Translates to: TTASQAPHSPPWDAQMARQCEKQ*DFVGST
Trigger: GGTGGAACCCACAAAATCCCATTGCTTTTCACACTG...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTGCCTGGCCTCCGTTCTaGAAACTACAAATCACTCAC +
Preference number: 2 (lower is better)
Translates to: AMTSANAPAAVGQICFRAAWPPF*KLQITH
Trigger: GTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGC...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCAGCAATGGGATTTTGTaGGTTCCACCTCCTCACCTA +
Preference number: 2 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSSNGIL*VPPPHL
Trigger: TAGGTGAGGAGGTGGAACCCACAAAATCCCATTGCT...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTACAGTGAGACTCTGCTaGGAAAGGGCGGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLATVRLC*ERAGMA
Trigger: TGCCATCCCCGCCCTTTCCCAGCAGAGTCTCACTGT...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CAA 90 bp ACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTaGCTTCCACTGCAGTTTACGGCGATGACTTCTGCCAACGCACCG +
Preference number: 2 (lower is better)
Translates to: TKCCVLSLGRILNPV*LPLQFTAMTSANAP
Trigger: CGGTGCGTTGGCAGAAGTCATCGCCGTAAACTGCAGTGGAAGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCTGCTCTGTGTCCTCCTaGAATGAAGGAATGTTCTCT +
Preference number: 2 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSCSVSS*NEGMFS
Trigger: AGAGAACATTCCTTCATTTCAGGAGGACACAGAGCA...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGTTATGCAACTGGTGTTaGGTCCATCAGAATCTAGTT +
Preference number: 2 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVLCNWC*VHQNLV
Trigger: AACTAGATTCTGATGGACGCAACACCAGTTGCATAA...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCACCTCACCAGATGTGTaGAGCAGCCCGGCTCCATGT +
Preference number: 2 (lower is better)
Translates to: SCARALAKWQASHSAPSATSPDV*SSPAPC
Trigger: ACATGGAGCCGGGCTGCTTCACACATCTGGTGAGGT...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTGGAGGGTGGATCACCTaGAGTCAGGAGTTTAAGACC +
Preference number: 2 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLAGGWIT*SQEFKT
Trigger: GGTCTTAAACTCCTGACTTCAGGTGATCCACCCTCC...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCAGAGGTTGCAGTGAGCTaGGATCAAGCCGCTACACTC +
Preference number: 2 (lower is better)
Translates to: CLDAVNTRPSAASYLWAAEVAVS*DQAATL
Trigger: GAGTGTAGCGGCTTGATCTCAGCTCACTGCAACCTC...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp TTCCAGGTCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGTATGCACAGTTTATTTaGGTAATGCTACCGTCACCA +
Preference number: 2 (lower is better)
Translates to: FQVIPNTPQQGSVQSGPVYAQFI*VMLPSP
Trigger: TGGTGACGGTAGCATTACCCAAATAAACTGTGCATA...CACCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGACCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
3UTR CAA 90 bp TGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTaGAACCCCGTCTTGCTTCCACTGCAGTTTACGGCGATGACTTCT +
Preference number: 2 (lower is better)
Translates to: CEHSTKCCVLSLGRI*NPVLLPLQFTAMTS
Trigger: AGAAGTCATCGCCGTAAACTGCAGTGGAAGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCCCAATCAAGGGAGTGTaGGGATGTGCGTCACTCTCT +
Preference number: 2 (lower is better)
Translates to: SCARALAKWQASHSAPSAPIKGV*GCASLS
Trigger: AGAGAGTGACGCACATCCTCACACTCCCTTGATTGG...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp GGGAGGGAAGGCAGGCACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACTTTCATCTGGCGTTTTaGCATCTCCTCTCCCATTTC +
Preference number: 2 (lower is better)
Translates to: GREGRHTKTQVCREVHTNFHLAF*HLLSHF
Trigger: GAAATGGGAGAGGAGATGCCAAAACGCCAGATGAAA...GTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCCTTCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
3UTR-3UTR CCA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTCGAATTCTGGGACACTaGGCTCAGCTCCTTCTTTTA +
Preference number: 2 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLARILGH*AQLLLL
Trigger: TAAAAGAAGGAGCTGAGCCCAGTGTCCCAGAATTCG...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CAA 90 bp AAGGAAATAACGGGGCAGCCCTGCAGTGTGAAAAGCAATGGGATTTaGTGGGTTCCACCTCCTCACCTAAGCATCCCTGGTCTACGCTAT +
Preference number: 2 (lower is better)
Translates to: KEITGQPCSVKSNGI*WVPPPHLSIPGLRY
Trigger: ATAGCGTAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATCCCATTGCTTTTCACACTGCAGGGCTGCCCCGTTATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCCCACACTCTCCACCGTaGGACGCCCAGATGGCTCGG +
Preference number: 2 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETPHSPP*DAQMAR
Trigger: CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGG...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCCCTCCTAGAGCCTCCTaGGGGGCCACCACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETPPRAS*GATTGN
Trigger: ATTGCCTGTGGTGGCCCCTCAGGAGGCTCTAGGAGG...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCAGCAGGACGTGCTGCTaGCAGTCCCTGGGGACTTAC +
Preference number: 2 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETSRTCC*QSLGTY
Trigger: GTAAGTCCCCAGGGACTGTCAGCAGCACGTCCTGCT...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCTGGCAAGTAGGCAGATaGCAGTGGTGGGGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETWQVGR*QWWGPP
Trigger: AGGGGGACCCCACCACTGCCATCTGCCTACTTGCCA...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CAA 90 bp CTGGCGTTTTGGCATCTCCTCTCCCATTTCATATGCACAGTTTATTaGGGTAATGCTACCGTCACCAGCAGAACACCTGTAAGTAAAAAC +
Preference number: 2 (lower is better)
Translates to: LAFWHLLSHFICTVY*GNATVTSRTPVSKN
Trigger: GTTTTTACTTACAGGTGTTCTGCTGGTGACGGTAGCATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291386.4
3UTR-3UTR GCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCGCACGCACACCAACCTaGAAAGGAAATAACGGGGCA +
Preference number: 2 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETARTPT*KGNNGA
Trigger: TGCCCCGTTATTTCCTTTGCAGGTTGGTGTGCGTGC...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCGGCAGCCCTGCAGTGTaGAAAGCAATGGGATTTTGT +
Preference number: 2 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETGSPAV*KAMGFC
Trigger: ACAAAATCCCATTGCTTTTCACACTGCAGGGCTGCC...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR GCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCGGGAGTGTGAGGATGTaGGTCACTCTCTGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETGSVRM*VTLCFS
Trigger: AGAAAAGCAGAGAGTGACGCACATCCTCACACTCCC...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR TCA 90 bp AAACTTGATTGCTTTCATCTGGCGTTTTGGCATCTCCTCTCCCATTTCATATGCAGGAAGGAAAAAGTATaGACAACAGGAAGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: KLDCFHLAFWHLLSHFICRKEKV*TTGSSR
Trigger: TCTGGAGCTTCCTGTTGTTCATACTTTTTCCTTCCT...GCATATGAAATGGGAGAGGAGATGCCAAAACGCCAGATGAAAGCAATCAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291386.4
3UTR-3UTR CCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCTTTCTTCTAACAGCTTaGTTAGCAAGCTCCGCCCTC +
Preference number: 2 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETFLLTA*LASSAL
Trigger: GAGGGCGGAGCTTGCTAACCAAGCTGTTAGAAGAAA...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp GCCCCACCCGGCATCGTGCCAGTGTCCACAGGGAACTaGCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: APPGIVPVSTGN*LGTSLLSRPRA
Trigger: TGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGGACACTGGCACGATGCCGGGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp CAGGCAGGCCGGGCTGGGGAGCTGACAGCAGACGCCTaGGACTCTGCCCAGCGTCCTCACCCACAACCTTTT +
Preference number: 3 (lower is better)
Translates to: QAGRAGELTADA*DSAQRPHPQPF
Trigger: AAAAGGTTGTGGGTGAGGACGCTGGGCAGAGTCCCAGGCGTCTGCTGTCAGCTCCCCAGCCCGGCCTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp TGCCTTTCCCACACGAGGTCCCCAAAGCAGAGCCCGTaGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: CLSHTRSPKQSP*LTVSQRHPCCH
Trigger: GTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGGGACCTCGTGTGGGAAAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 72 bp TTTCCCACACGAGGTCCCCAAAGCAGAGCCCGTGGCTaGCAGTGTCCCAGCGCCACCCCTGCTGCCACTCCT +
Preference number: 3 (lower is better)
Translates to: FPTRGPQSRARG*QCPSATPAATP
Trigger: AGGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGGGACCTCGTGTGGGAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp TCAGCCCACGACGGGAGCAGAGCCATGTCGAAGCCGTaGCCCACACAGGGTGGACAAGGACATGGCCTGACA +
Preference number: 3 (lower is better)
Translates to: SAHDGSRAMSKP*PTQGGQGHGLT
Trigger: TGTCAGGCCATGTCCTTGTCCACCCTGTGTGGGGCACGGCTTCGACATGGCTCTGCTCCCGTCGTGGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp GGCTCTGTGGCCACCCATCGCCGTAAGGCTCCGGGATaGAGACAGCATGGACAGGGACCTCGCACAAAGGCA +
Preference number: 3 (lower is better)
Translates to: GSVATHRRKAPG*RQHGQGPRTKA
Trigger: TGCCTTTGTGCGAGGTCCCTGTCCATGCTGTCTCCATCCCGGAGCCTTACGGCGATGGGTGGCCACAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CAA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGGAGAATCGCTTGAACTaGGGAGGGGGAGGTTGCAGT +
Preference number: 3 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVENRLN*GGGGCS
Trigger: ACTGCAACCTCCCCCTCCCAAGTTCAAGCGATTCTC...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 72 bp GGAACCCGGGAGGTGGATGTTGCAGTGAGTCTGCAGTaGGCCAAGATCTCGCCACTGCACTCCAGCCGGGGT +
Preference number: 3 (lower is better)
Translates to: GTREVDVAVSLQ*AKISPLHSSRG
Trigger: ACCCCGGCTGGAGTGCAGTGGCGAGATCTTGGCTCACTGCAGACTCACTGCAACATCCACCTCCCGGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp CACCCGGCATCGTGCCAGTGTCCACAGGGAACTGCCTaGGGACTTCACTCCTCTCCAGGCCAAGGGCATCAT +
Preference number: 3 (lower is better)
Translates to: HPASCQCPQGTA*GLHSSPGQGHH
Trigger: ATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGGACACTGGCACGATGCCGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp TGCCAATACATAGACAATGCTGGGCAAGGCCAGAGATaGTGGTCAAGGGCGGGGATGTCGGGAGAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: CQYIDNAGQGQR*WSRAGMSGEGG
Trigger: CCCGCCCTCTCCCGACATCCCCGCCCTTGACCAGCATCTCTGGCCTTGCCCAGCATTGTCTATGTATTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp CTGACTTGCAGTGAGAGCCCACATCTGCCACCAGGATaGCTCCCAGCACCACCGCGTCACAAGCACCACACT +
Preference number: 3 (lower is better)
Translates to: LTCSESPHLPPG*LPAPPRHKHHT
Trigger: AGTGTGGTGCTTGTGACGCGGTGGTGCTGGGAGCCATCCTGGTGGCAGATGTGGGCTCTCACTGCAAGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp CACACCAAGAGCACACACACGCACGCGGGGTTCTTCTaGGCCGATGCTTCCTGGGAGATCACCAACCCCTAC +
Preference number: 3 (lower is better)
Translates to: HTKSTHTHAGFF*ADASWEITNPY
Trigger: GTAGGGGTTGGTGATCTCCCAGGAAGCATCGGCCCAGAAGAACCCCGCGTGCGTGTGTGTGCTCTTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp GAGAGAGGGGCAGCAGGACGTGCTGCTGACAGTCCCTaGGGACTTACACTGACTTGCAGTGAGAGCCCACAT +
Preference number: 3 (lower is better)
Translates to: ERGAAGRAADSP*GLTLTCSESPH
Trigger: ATGTGGGCTCTCACTGCAAGTCAGTGTAAGTCCCCAGGGACTGTCAGCAGCACGTCCTGCTGCCCCTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp GAGCAGAGCCATGTCGAAGCCGTGCCCCACACAGGGTaGACAAGGACATGGCCTGACAGCTCCTCAGAAATC +
Preference number: 3 (lower is better)
Translates to: EQSHVEAVPHTG*TRTWPDSSSEI
Trigger: GATTTCTGAGGAGCTGTCAGGCCATGTCCTTGTCCACCCTGTGTGGGGCACGGCTTCGACATGGCTCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp CACACGCACGCGGGGTTCTTCTGGGCCGATGCTTCCTaGGAGATCACCAACCCCTACAGTCCCTCTGTAAAG +
Preference number: 3 (lower is better)
Translates to: HTHAGFFWADAS*EITNPYSPSVK
Trigger: CTTTACAGAGGGACTGTAGGGGTTGGTGATCTCCCAGGAAGCATCGGCCCAGAAGAACCCCGCGTGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CAA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGATTTCTTCTAACAGCTaGGTTAGCAAGCTCCGCCCT +
Preference number: 3 (lower is better)
Translates to: TTASQAPHSPPWDAQMARISSNS*VSKLRP
Trigger: AGGGCGGAGCTTGCTAACCAAGCTGTTAGAAGAAAT...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CAA 90 bp AGGTCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGGGGACTTTCATCTGGCGTTTaGGCATCTCCTCTCCCATTT +
Preference number: 3 (lower is better)
Translates to: RSFLTRRSRALYSPARWGLSSGV*ASPLPF
Trigger: AAATGGGAGAGGAGATGCCAAAACGCCAGATGAAAG...TCCCCACCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
3UTR-3UTR CAA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTAGCTGGACTCAGTCCTaGCAGAACGTGGCAAGTACT +
Preference number: 3 (lower is better)
Translates to: AMTSANAPAAVGQICFRASWTQS*QNVAST
Trigger: AGTACTTGCCACGTTCTGCAAGGACTGAGTCCAGCT...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 72 bp AGTCACCGCGCCGGCCCGTCCTTTGTCTTGACGCTGTaGACACTCGACCAAGTGCTGCGTCTTATCTTTGGG +
Preference number: 3 (lower is better)
Translates to: SHRAGPSFVLTL*TLDQVLRLIFG
Trigger: CCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACAAAGGACGGGCCGGCGCGGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp ATCAGGCACGCACGCACACACGCACGCACACCAACCTaGAAAGGAAATAACGGGGCAGCCCTGCAGTGTGAA +
Preference number: 3 (lower is better)
Translates to: IRHARTHARTPT*KGNNGAALQCE
Trigger: TTCACACTGCAGGGCTGCCCCGTTATTTCCTTTGCAGGTTGGTGTGCGTGCGTGTGTGCGTGCGTGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 72 bp AGAGAATCGCTTGAACTTGGGAGGGGGAGGTTGCAGTaGGCTGAGATCAAGCCGCTACACTCCACCTTGGGC +
Preference number: 3 (lower is better)
Translates to: RESLELGRGRLQ*AEIKPLHSTLG
Trigger: GCCCAAGGTGGAGTGTAGCGGCTTGATCTCAGCTCACTGCAACCTCCCCCTCCCAAGTTCAAGCGATTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 72 bp CTTCCCAGGTCTGGAACCCAGGAGGTCACAGTGGGCTaGCATGAAGGGGCTGAGCTTACACCAATCAAGGGA +
Preference number: 3 (lower is better)
Translates to: LPRSGTQEVTVG*HEGAELTPIKG
Trigger: TCCCTTGATTGGTGTAAGCTCAGCCCCTTCATGTCAGCCCACTGTGACCTCCTGGGTTCCAGACCTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp ACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTaGTTTCGGGCTCTCACTTGTAACAGTCACTTCCCG +
Preference number: 3 (lower is better)
Translates to: TSANAPAAVGQI*FRALTCNSHFP
Trigger: CGGGAAGTGACTGTTACAAGTGAGAGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp GAGACTGCTGAAGCTGGACTCAGTCCTTGCAGAACGTaGCAAGTACTTCCCAGGTCTGGAACCCAGGAGGTC +
Preference number: 3 (lower is better)
Translates to: ETAEAGLSPCRT*QVLPRSGTQEV
Trigger: GACCTCCTGGGTTCCAGACCTGGGAAGTACTTGCCACGTTCTGCAAGGACTGAGTCCAGCTTCAGCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 72 bp CGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTaGACCCCGTCTTGCTTCCACTGCAGTTTACGGCGA +
Preference number: 3 (lower is better)
Translates to: RPSAASYLWAAS*TPSCFHCSLRR
Trigger: TCGCCGTAAACTGCAGTGGAAGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp AAGCAGGAGAATCACTGGAACCCGGGAGGTGGATGTTaGAGTGAGTCTGCAGTGAGCCAAGATCTCGCCACT +
Preference number: 3 (lower is better)
Translates to: KQENHWNPGGGC*SESAVSQDLAT
Trigger: AGTGGCGAGATCTTGGCTCACTGCAGACTCACTGCAACATCCACCTCCCGGGTTCCAGTGATTCTCCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp CTTCCGGATGAGACTGCTGAAGCTGGACTCAGTCCTTaGAGAACGTGGCAAGTACTTCCCAGGTCTGGAACC +
Preference number: 3 (lower is better)
Translates to: LPDETAEAGLSP*RTWQVLPRSGT
Trigger: GGTTCCAGACCTGGGAAGTACTTGCCACGTTCTGCAAGGACTGAGTCCAGCTTCAGCAGTCTCATCCGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CAA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCATTATGCAACTGGTGTaGCGTCCATCAGAATCTAGT +
Preference number: 3 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSIMQLV*RPSESS
Trigger: ACTAGATTCTGATGGACGCAACACCAGTTGCATAAT...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp GATTTTGTGGGTTCCACCTCCTCACCTAAGCATCCCTaGTCTACGCTATGTCACGACCCTCTGCTGAACCAC +
Preference number: 3 (lower is better)
Translates to: DFVGSTSSPKHP*STLCHDPLLNH
Trigger: GTGGTTCAGCAGAGGGTCGTGACATAGCGTAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp GGGCAGCCCTGCAGTGTGAAAAGCAATGGGATTTTGTaGGTTCCACCTCCTCACCTAAGCATCCCTGGTCTA +
Preference number: 3 (lower is better)
Translates to: GQPCSVKSNGIL*VPPPHLSIPGL
Trigger: TAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATCCCATTGCTTTTCACACTGCAGGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp GTCGAAGCCGTGCCCCACACAGGGTGGACAAGGACATaGCCTGACAGCTCCTCAGAAATCCTTAGAGATTTT +
Preference number: 3 (lower is better)
Translates to: VEAVPHTGWTRT*PDSSSEILRDF
Trigger: AAAATCTCTAAGGATTTCTGAGGAGCTGTCAGGCCATGTCCTTGTCCACCCTGTGTGGGGCACGGCTTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CCA 72 bp AAGTACTTCCCAGGTCTGGAACCCAGGAGGTCACAGTaGGCTGACATGAAGGGGCTGAGCTTACACCAATCA +
Preference number: 3 (lower is better)
Translates to: KYFPGLEPRRSQ*ADMKGLSLHQS
Trigger: TGATTGGTGTAAGCTCAGCCCCTTCATGTCAGCCCACTGTGACCTCCTGGGTTCCAGACCTGGGAAGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR-3UTR CAA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTGAGTTCAAGACCAGTTaGGTCAAGATGGTGAAACCC +
Preference number: 3 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLAEFKTS*VKMVKP
Trigger: GGGTTTCACCATCTTGACCAAACTGGTCTTGAACTC...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 72 bp ACAGCTTGGTTAGCAAGCTCCGCCCTCTTCTTTATCTaGCCTTCTAACGACCTCACCAGATGTGTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: TAWLASSALFFI*PSNDLTRCVKQ
Trigger: CTGCTTCACACATCTGGTGAGGTCGTTAGAAGGTCAGATAAAGAAGAGGGCGGAGCTTGCTAACCAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR TCA 72 bp ATTCTGGGACACTGGGCTCAGCTCCTTCTTTTAGAATaGCCAGAGACAGGCTCATCCTCTGCCTATACCAAG +
Preference number: 3 (lower is better)
Translates to: ILGHWAQLLLLE*PETGSSSAYTK
Trigger: CTTGGTATAGGCAGAGGATGAGCCTGTCTCTGGTCATTCTAAAAGAAGGAGCTGAGCCCAGTGTCCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp CAGAAACTTTCCATTAGCGTGGGGGTGACCATGAAATaGCTGGTCAAAAACCCGGGCACTGATTGTCATAAC +
Preference number: 3 (lower is better)
Translates to: QKLSISVGVTMK*LVKNPGTDCHN
Trigger: GTTATGACAATCAGTGCCCGGGTTTTTGACCAGGCATTTCATGGTCACCCCCACGCTAATGGAAAGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp CCTTCTTTTAGAATGACCAGAGACAGGCTCATCCTCTaGCTATACCAAGTCCTTCCGGATGAGACTGCTGAA +
Preference number: 3 (lower is better)
Translates to: PSFRMTRDRLIL*LYQVLPDETAE
Trigger: TTCAGCAGTCTCATCCGGAAGGACTTGGTATAGGCAGAGGATGAGCCTGTCTCTGGTCATTCTAAAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR GCA 72 bp AAGGCAGGCACACGAAGACACAGGTATGTCGGGAAGTaGACACAAACCGTTGTCTTTCCTTTTTGGTTAAAG +
Preference number: 3 (lower is better)
Translates to: KAGTRRHRYVGK*TQTVVFPFWLK
Trigger: CTTTAACCAAAAAGGAAAGACAACGGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCGCAGGCAGGCCGGGCTaGGGAGCTGACAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLAGRPG*GADSRR
Trigger: GCGTCTGCTGTCAGCTCCCCAGCCCGGCCTGCCTGC...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCCACACTCTCCACCGTaGGACGCCCAGATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSPHSPP*DAQMAR
Trigger: CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGG...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCACATCTCAACACCCCTaGGGCCCCACCCGGCATCGT +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSTSQHP*GPTRHR
Trigger: ACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGT...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCAGGCACAGCCCCACCTaGTCCTTCTCAGCCCACGAC +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLRHSPT*SFSAHD
Trigger: GTCGTGGGCTGAGAAGGAGCAGGTGGGGCTGTGCCT...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp TTCCAGGTCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGCGCGGCTCTCCCGCTTaGGTTCCCACCCTACCGCGG +
Preference number: 4 (lower is better)
Translates to: FQVIPNTPQQGSVQSGPVRGSPA*VPTLPR
Trigger: CCGCGGTAGGGTGGGAACCCAAGCGGGAGAGCCGCG...CACCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGACCTGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGGCGGGGACGACGGCATaGCGGCGGCCGCAAATCCCG +
Preference number: 4 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVAGTTA*RRPQIP
Trigger: CGGGATTTGCGGCCGCCGCCATGCCGTCGTCCCCGC...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCCATCTGCCACCAGGATaGCTCCCAGCACCACCGCGT +
Preference number: 4 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPHLPPG*LPAPPR
Trigger: ACGCGGTGGTGCTGGGAGCCATCCTGGTGGCAGATG...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCCCAAAGCAGAGCCCGTaGCTGACAGTGTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPPKQSP*LTVSQR
Trigger: GCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGGTAGGCAGATGGCAGTaGTGGGGTCCCCCTCGACCC +
Preference number: 4 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVVGRWQ*WGPPRP
Trigger: GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTAC...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGGCCGGGGTGACACAGTaGGACTCTGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TTASQAPHSPPWDAQMARAGVTQ*DSAGKG
Trigger: CCCTTTCCCAGCAGAGTCTCACTGTGTCACCCCGGC...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCCCGGCCCTGCCTCTaGACAAGCAGCATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLPRPCL*TSSIFL
Trigger: GAGGAAAATGCTGCTTGTTCAGAGGCAGGGCCGGGG...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGCCCCACCCGGCATCGTaGCAGTGTCCACAGGGAACT +
Preference number: 4 (lower is better)
Translates to: TTASQAPHSPPWDAQMARPHPAS*QCPQGT
Trigger: AGTTCCCTGTGGACACTGGCACGATGCCGGGTGGGG...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCACGCACCGGCTGCTGTaGGGCAGATTTGCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLTHRLL*GRFAFG
Trigger: CCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGT...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCTGGCAAGTAGGCAGATaGCAGTGGTGGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLWQVGR*QWWGPP
Trigger: AGGGGGACCCCACCACTGCCATCTGCCTACTTGCCA...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGCTGGGATTACAGGCCTaGGTCACCGCGCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVLGLQA*VTAPAR
Trigger: ACGGGCCGGCGCGGTGACTCAGGCCTGTAATCCCAG...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGGGGAGGAGGGAGGGAAGGCATCCATGTCTTCCGTGTaGTGGATACACTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AAAGLCTVRPGGEEGGKASMSSV*WIHWQS
Trigger: GCTCTGCCAGTGTATCCAGCACACGGAAGACATGGA...TGCCTTCCCTCCCTCCTCCCCACCGGGCCGGACTGTACAGAGCCCTGCTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCCGGGAGGTGGATGTTaGAGTGAGTCTGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSPGGGC*SESAVS
Trigger: GCTCACTGCAGACTCACTGCAACATCCACCTCCCGG...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GGAGGGAAGGCAGGCACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACCGCGGGGACGACGGCATaGCGGCGGCCGCAAATCCCG +
Preference number: 4 (lower is better)
Translates to: GGKAGTRRHRYVGKCTQTAGTTA*RRPQIP
Trigger: CGGGATTTGCGGCCGCCGCCATGCCGTCGTCCCCGC...GGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCCTTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp ACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGGGGAGGAGGGAGGGAAGGTCCTCGTGGTTGTCCTaGATGTCCACATTGACCACG +
Preference number: 4 (lower is better)
Translates to: TPQQGSVQSGPVGRREGRSSWLS*MSTLTT
Trigger: CGTGGTCAATGTGGACATCCAGGACAACCACGAGGA...CCTTCCCTCCCTCCTCCCCACCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCTGGGCCGATGCTTCCTaGGAGATCACCAACCCCTAC +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLWADAS*EITNPY
Trigger: GTAGGGGTTGGTGATCTCCCAGGAAGCATCGGCCCA...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCCACAGGGAACTGCCTaGGGACTTCACTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSPQGTA*GLHSSP
Trigger: TGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCTACACTGACTTGCAGTaGGAGCCCACATCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLYTDLQ*EPTSAT
Trigger: GGTGGCAGATGTGGGCTCTCACTGCAAGTCAGTGTA...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCCAAACCAGACTCTTaGGCACGCAGCCCTAAACCA +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLPKPDS*ARSPKP
Trigger: TGGTTTAGGGCTGCGTGCTCAAGAGTCTGGTTTGGG...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGCTTTGGGCCGCATCTTaGACCCCGTCTTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVLWAAS*TPSCFH
Trigger: GTGGAAGCAAGACGGGGTTCAAGATGCGGCCCAAAG...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGGCCCGTCCTTTGTCTTaGCGCTGTGAACACTCGACC +
Preference number: 4 (lower is better)
Translates to: TTASQAPHSPPWDAQMARARPLS*RCEHST
Trigger: GGTCGAGTGTTCACAGCGTCAAGACAAAGGACGGGC...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGCCACGCCTACTGCCATaGGTGGCACTGGAACTAACC +
Preference number: 4 (lower is better)
Translates to: TTASQAPHSPPWDAQMARPRLLP*VALELT
Trigger: GGTTAGTTCCAGTGCCACCCATGGCAGTAGGCGTGG...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCGGAGGGTGGATCACCTaGAGTCAGGAGTTTAAGACC +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLGGWIT*SQEFKT
Trigger: GGTCTTAAACTCCTGACTTCAGGTGATCCACCCTCC...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTCCTCCTAGAGCCTCCTaGGGGGCCACCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: AMTSANAPAAVGQICFRAPPRAS*GATTGN
Trigger: ATTGCCTGTGGTGGCCCCTCAGGAGGCTCTAGGAGG...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCTGGTCTCTAACTTCTaGCCTCATGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLLVSNF*PHDPPT
Trigger: GGTGGGTGGATCATGAGGTCAGAAGTTAGAGACCAG...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGGGGAGGACGGTGTGCAGAAAGGTaGGGCCACTCTTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SFLTRRSRALYSPARWGGRCAER*GHSSPR
Trigger: TCGAGGAGAAGAGTGGCCGCACCTTTCTGCACACCG...TCCTCCCCACCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGACTCCGGGAAGGGGCTaGGTGGTCATGCACCGCCTA +
Preference number: 4 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVTPGRG*VVMHRL
Trigger: TAGGCGGTGCATGACCACGCAGCCCCTTCCCGGAGT...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCGACAGGCTCATCCTCTaGCTATACCAAGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLDRLIL*LYQVLP
Trigger: CGGAAGGACTTGGTATAGGCAGAGGATGAGCCTGTC...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCGCTGTGGGGCAGATTTaGTTTCGGGCTCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSAVGQI*FRALTC
Trigger: ACAAGTGAGAGCCCGAAAGCAAATCTGCCCCACAGC...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGACTGGAACTAACCCGTaGACGATCCGACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TTASQAPHSPPWDAQMARTGTNP*TIRRAP
Trigger: TGGTGCACGTCGGATCGTCCACGGGTTAGTTCCAGT...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCAAGCAGGAGAATCACTaGAACCCGGGAGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSKQENH*NPGGGC
Trigger: ACATCCACCTCCCGGGTTCCAGTGATTCTCCTGCTT...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCAGTACTTCCCAGGTCTaGAACCCAGGAGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSSTSQV*NPGGHS
Trigger: ACTGTGACCTCCTGGGTTCCAGACCTGGGAAGTACT...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTGGCAGATGGCAGTGGTaGGGTCCCCCTCGACCCCGG +
Preference number: 4 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLAGRWQW*GPPRPR
Trigger: CCGGGGTCGAGGGGGACCCCACCACTGCCATCTGCC...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGCCAATCAAGGGAGTGTaGGGATGTGCGTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVPIKGV*GCASLS
Trigger: AGAGAGTGACGCACATCCTCACACTCCCTTGATTGG...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCTTTGTCTTGACGCTGTaGACACTCGACCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLFVLTL*TLDQVL
Trigger: CAGCACTTGGTCGAGTGTTCACAGCGTCAAGACAAA...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCTGTTGTGCGCCTCCATaGTCCGGTTCTGGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSCCAPP*SGSGCS
Trigger: CGAGCAACCAGAACCGGAGCATGGAGGCGCACAACA...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGGGGAGGATTCTCCTCGAACTCCTaGAGCAGCTCGTCGATCTCG +
Preference number: 4 (lower is better)
Translates to: SFLTRRSRALYSPARWGGFSSNS*SSSSIS
Trigger: CGAGATCGACGAGCTGCTGCAGGAGTTCGAGGAGAA...TCCTCCCCACCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTCCTCACCACGCCTACTaGCATGGGTGGCACTGGAAC +
Preference number: 4 (lower is better)
Translates to: AMTSANAPAAVGQICFRAPHHAY*HGWHWN
Trigger: GTTCCAGTGCCACCCATGGCAGTAGGCGTGGTGAGG...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGGCACGCACACCAACCTaGAAAGGAAATAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVARTPT*KGNNGA
Trigger: TGCCCCGTTATTTCCTTTGCAGGTTGGTGTGCGTGC...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp AGATGTGTGAAGCAGCCCGGCTCCATGTGTATCAGGCACGCACGCACACACGCAAGACGCCTGGGACTCTaGCCAGCGTCCTCACCCACA +
Preference number: 4 (lower is better)
Translates to: RCVKQPGSMCIRHARTHARRLGL*PASSPT
Trigger: TGTGGGTGAGGACGCTGGGCAGAGTCCCAGGCGTCT...TGCGTGTGTGCGTGCGTGCCTGATACACATGGAGCCGGGCTGCTTCACACATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCGGGAGTGTGAGGATGTaGGTCACTCTCTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLGSVRM*VTLCFS
Trigger: AGAAAAGCAGAGAGTGACGCACATCCTCACACTCCC...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCGTGTCCACAGGGAACTaGCTGGGGACTTCACTCCTC +
Preference number: 4 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSVSTGN*LGTSLL
Trigger: GAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGGACAC...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGTTCAAGCAACTCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVFKQLS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGAGTTGCTTGAA...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp AGATGTGTGAAGCAGCCCGGCTCCATGTGTATCAGGCACGCACGCACACACGCACTGACAGCAGACGCCTaGGACTCTGCCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: RCVKQPGSMCIRHARTHALTADA*DSAQRP
Trigger: AGGACGCTGGGCAGAGTCCCAGGCGTCTGCTGTCAG...TGCGTGTGTGCGTGCGTGCCTGATACACATGGAGCCGGGCTGCTTCACACATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCAGTCCTTGCAGAACGTaGCAAGTACTTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSSPCRT*QVLPRS
Trigger: AGACCTGGGAAGTACTTGCCACGTTCTGCAAGGACT...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp AGATGTGTGAAGCAGCCCGGCTCCATGTGTATCAGGCACGCACGCACACACGCACACGCGGGGTTCTTCTaGGCCGATGCTTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RCVKQPGSMCIRHARTHAHAGFF*ADASWE
Trigger: CTCCCAGGAAGCATCGGCCCAGAAGAACCCCGCGTG...TGCGTGTGTGCGTGCGTGCCTGATACACATGGAGCCGGGCTGCTTCACACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCCTATGTTGGCCAGGCTaGTCTCTAACTTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSLCWPG*SLTSDL
Trigger: GAGGTCAGAAGTTAGAGACCAGCCTGGCCAACATAG...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGGCCTGGCCTCCGTTCTaGAAACTACAAATCACTCAC +
Preference number: 4 (lower is better)
Translates to: TTASQAPHSPPWDAQMARAWPPF*KLQITH
Trigger: GTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGC...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTGCAGGCTTCCCATTCTaGACCTTCTGCCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: AMTSANAPAAVGQICFRAAGFPF*TFCPHL
Trigger: TAGGTGGGGGCAGAAGGTGCAGAATGGGAAGCCTGC...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTTGCCAACGCACCGGCTaGTGTGGGGCAGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: AMTSANAPAAVGQICFRACQRTG*CGADLL
Trigger: AAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCA...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGTACGGCGATGACTTCTaGCAACGCACCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVYGDDF*QRTGCC
Trigger: ACAGCAGCCGGTGCGTTGGCAGAAGTCATCGCCGTA...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCAGCAATGGGATTTTGTaGGTTCCACCTCCTCACCTA +
Preference number: 4 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPSNGIL*VPPPHL
Trigger: TAGGTGAGGAGGTGGAACCCACAAAATCCCATTGCT...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCGGGATGGAGACAGCATaGACAGGGACCTCGCACAAA +
Preference number: 4 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSGMETA*TGTSHK
Trigger: TTTGTGCGAGGTCCCTGTCCATGCTGTCTCCATCCC...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGCCTAAACCAGACTCTTaGAATAGGCTCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TTASQAPHSPPWDAQMARPKPDS*NRLCGH
Trigger: GTGGCCACAGAGCCTATTCCAAGAGTCTGGTTTAGG...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCCGAATTCTGGGACACTaGGCTCAGCTCCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPRILGH*AQLLLL
Trigger: TAAAAGAAGGAGCTGAGCCCAGTGTCCCAGAATTCG...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCAGAAATTCTGCGAGGTaGGCATGCACAGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLRNSAR*ACTEKP
Trigger: AGGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCT...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GCCCTGGCCACATGGCAAGTAGGCAGATGGCAGTGGTGGGGTCCCCCTCGACCCTGCTCTGTGTCCTCCTaGAATGAAGGAATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALATWQVGRWQWWGPPRPCSVSS*NEGMFS
Trigger: AGAGAACATTCCTTCATTTCAGGAGGACACAGAGCA...GGGTCGAGGGGGACCCCACCACTGCCATCTGCCTACTTGCCATGTGGCCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGCTCCTTCTTTTAGAATaGCCAGAGACAGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVLLLLE*PETGSS
Trigger: GGATGAGCCTGTCTCTGGTCATTCTAAAAGAAGGAG...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTCCCACACCGTGTCTGTaGGCCTCACCACGCCTACTG +
Preference number: 4 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLAPTPCL*ASPRLL
Trigger: CAGTAGGCGTGGTGAGGCGCACAGACACGGTGTGGG...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTCCTCCTCCAGGGCGATaGGAAGACCCAGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLAPPPGR*EDPAPN
Trigger: GTTTGGGGCTGGGTCTTCCCATCGCCCTGGAGGAGG...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GGGATTTTGTGGGTTCCACCTCCTCACCTAAGCATCCCTGGTCTACGCTATGTCGCACTCCAGCCGGGGTaGCACAGTGAGACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GILWVPPPHLSIPGLRYVALQPG*HSETLL
Trigger: CAGCAGAGTCTCACTGTGTCACCCCGGCTGGAGTGC...GACATAGCGTAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp AGATGTGTGAAGCAGCCCGGCTCCATGTGTATCAGGCACGCACGCACACACGCAGAGGTTGCAGTGAGCTaGGATCAAGCCGCTACACTC +
Preference number: 4 (lower is better)
Translates to: RCVKQPGSMCIRHARTHAEVAVS*DQAATL
Trigger: GAGTGTAGCGGCTTGATCTCAGCTCACTGCAACCTC...TGCGTGTGTGCGTGCGTGCCTGATACACATGGAGCCGGGCTGCTTCACACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTGACAAGGACATGGCCTaGCAGCTCCTCAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: AMTSANAPAAVGQICFRADKDMA*QLLRNP
Trigger: AGGATTTCTGAGGAGCTGTCAGGCCATGTCCTTGTC...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGATAACGGGGCAGCCCTaGAGTGTGAAAAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVITGQP*SVKSNG
Trigger: CCCATTGCTTTTCACACTGCAGGGCTGCCCCGTTAT...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCGCTGGACTCAGTCCTTaGAGAACGTGGCAAGTACTT +
Preference number: 4 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSAGLSP*RTWQVL
Trigger: AAGTACTTGCCACGTTCTGCAAGGACTGAGTCCAGC...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCAAGCAGGACGTGCTGCTaGCAGTCCCTGGGGACTTAC +
Preference number: 4 (lower is better)
Translates to: CLDAVNTRPSAASYLWAASRTCC*QSLGTY
Trigger: GTAAGTCCCCAGGGACTGTCAGCAGCACGTCCTGCT...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTGTGGACGATCCGACGTaGACCAGGAATAGAAACCAA +
Preference number: 4 (lower is better)
Translates to: AMTSANAPAAVGQICFRAVDDPT*TRNRNQ
Trigger: TTGGTTTCTATTCCTGGTGCACGTCGGATCGTCCAC...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCTTATGCAACTGGTGTTaGGTCCATCAGAATCTAGTT +
Preference number: 4 (lower is better)
Translates to: PKAEPVADSVPAPPLLPLLCNWC*VHQNLV
Trigger: AACTAGATTCTGATGGACGCAACACCAGTTGCATAA...GAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGCGGGGATGGCAACAGTaGCAACACGAAGATAAAAGG +
Preference number: 4 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVRGWQQ*QHEDKR
Trigger: CCTTTTATCTTCGTGTTGGCACTGTTGCCATCCCCG...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GGGATTTTGTGGGTTCCACCTCCTCACCTAAGCATCCCTGGTCTACGCTATGTCACTCCTGGAAGGGGCTaGGTGGTCACGCATCGCCTA +
Preference number: 4 (lower is better)
Translates to: GILWVPPPHLSIPGLRYVTPGRG*VVTHRL
Trigger: TAGGCGATGCGTGACCACGCAGCCCCTTCCAGGAGT...GACATAGCGTAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCTTTCTTCTAACAGCTTaGTTAGCAAGCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSFLLTA*LASSAL
Trigger: GAGGGCGGAGCTTGCTAACCAAGCTGTTAGAAGAAA...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GGGATTTTGTGGGTTCCACCTCCTCACCTAAGCATCCCTGGTCTACGCTATGTCGTGCCCCACACAGGGTaGACAAGGACATGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GILWVPPPHLSIPGLRYVVPHTG*TRTWPD
Trigger: GTCAGGCCATGTCCTTGTCCACCCTGTGTGGGGCAC...GACATAGCGTAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCAGAGCTTTAGCTAAGTaGCAGGCTTCCCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSRALAK*QASHSA
Trigger: TGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCT...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GGGAGGGAAGGCAGGCACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACCCTGGAAGCTTCACGTaGGTCCCTGTTCCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GREGRHTKTQVCREVHTNPGSFT*VPVPKD
Trigger: ATCCTTTGGAACAGGGACTCACGTGAAGCTTCCAGG...GTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCCTTCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR TCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCTGTGTCCTCCTGAAATaGAGGAATGTTCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSCVLLK*RNVLSH
Trigger: ATGGGAGAGAACATTCCTTCATTTCAGGAGGACACA...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCACCTGGGGACTTACACTaGCTTGCAGTGAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: CLDAVNTRPSAASYLWAAPGDLH*LAVRAH
Trigger: GTGGGCTCTCACTGCAAGTCAGTGTAAGTCCCCAGG...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCGCCATGTCGAAGCCGTaGCCCACACAGGGTGGACAA +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSAAMSKP*PTQGGQ
Trigger: TTGTCCACCCTGTGTGGGGCACGGCTTCGACATGGC...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCGGCCACCACAGGCAATaGCTTTCCCACACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSAGHHRQ*LSHTRS
Trigger: GGACCTCGTGTGGGAAAGGCATTGCCTGTGGTGGCC...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp AGATGTGTGAAGCAGCCCGGCTCCATGTGTATCAGGCACGCACGCACACACGCAGAACACTCGACCAAGTaGTGCGTCTTATCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RCVKQPGSMCIRHARTHAEHSTK*CVLSLG
Trigger: GCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTC...TGCGTGTGTGCGTGCGTGCCTGATACACATGGAGCCGGGCTGCTTCACACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp ACCACCGCGTCACAAGCACCACACTCTCCACCGTGGGACGCCCAGATGGCTCGGTATTCTCTTTTCATTTaGAATACGTTTGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TTASQAPHSPPWDAQMARYSLFI*NTFGLA
Trigger: GGCCAGGCCAAACGTATTCCAAATGAAAAGAGAATA...CCGAGCCATCTGGGCGTCCCACGGTGGAGAGTGTGGTGCTTGTGACGCGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGCCTTTTAACTGTAACTaGCAGAGGAGACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVPFNCN*QRRQQG
Trigger: TCCCTGCTGTCTCCTCTGCCAGTTACAGTTAAAAGG...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTGGGTGGACAAGGACATaGCCTGACAGCTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLAGWTRT*PDSSSE
Trigger: TTCTGAGGAGCTGTCAGGCCATGTCCTTGTCCACCC...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CAA 72 bp TCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTaGAACCCCGTCTTGCTTCCACTGCAGTTTACGGCG +
Preference number: 4 (lower is better)
Translates to: STKCCVLSLGRI*NPVLLPLQFTA
Trigger: CGCCGTAAACTGCAGTGGAAGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CAA 72 bp CGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTaGGGCCGCATCTTGAACCCCGTCTTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: RCEHSTKCCVLS*GRILNPVLLPL
Trigger: CAGTGGAAGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCAAGCTACCCAGGAGGCTaGAGCAGGAGAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: CLDAVNTRPSAASYLWAASYPGG*SRRITG
Trigger: TCCAGTGATTCTCCTGCTTCAGCCTCCTGGGTAGCT...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCACCTTGGGCAACAGGGTaGGACTCTGACTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: CLDAVNTRPSAASYLWAAPWATG*DSDSIS
Trigger: TGAGATGGAGTCAGAGTCTCACCCTGTTGCCCAAGG...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GAATACGTTTGGCCTGGCCTCCGTTCTGAAAACTACAAATCACTCACTATAACAGCCGGGCTGGGGAGCTaGCAGCAGACGCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: EYVWPGLRSENYKSLTITAGLGS*QQTPGT
Trigger: AGTCCCAGGCGTCTGCTGTCAGCTCCCCAGCCCGGC...TGTTATAGTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGCCAAACGTATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCCCATTCTGCACCTTCTaGCCCCACCTAGGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSAPFCTF*PHLGGK
Trigger: TTTGCCCCCTAGGTGGGGGCAGAAGGTGCAGAATGG...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCACACTCGACCAAGTGCTaGGTCTTATCTTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: CLDAVNTRPSAASYLWAAHSTKC*VLSLGR
Trigger: GCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTG...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCGCTCACTGCAGGCTCTaGCTCCCAGGTTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSAAHCRL*LPGSSN
Trigger: GTTGCTTGAACCTGGGAGGCAGAGCCTGCAGTGAGC...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCAATTATCAGAAATTCTaGGAGGTGGGCATGCACAGA +
Preference number: 4 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSNYQKF*EVGMHR
Trigger: TCTGTGCATGCCCACCTCGCAGAATTTCTGATAATT...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp ATCTGGCGTTTTGGCATCTCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAACGGAGCGCAGGCACTaGCCTTCGGGCGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: IWRFGISSPISYAQFIWVTERRH*PSGALH
Trigger: GTGCAGCGCGCCCGAAGGCCAGTGCCTGCGCTCCGT...TACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp CATCTGTTTATTGACAATTCCAGGTCATTCCTAACACGCCGCAGCAGGGCTCTGGTCGGGAGCTGGTCCTaGAAGCTTCACGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: HLFIDNSRSFLTRRSRALVGSWS*KLHVSP
Trigger: GGGACTCACGTGAAGCTTCCAGGACCAGCTCCCGAC...CAGAGCCCTGCTGCGGCGTGTTAGGAATGACCTGGAATTGTCAATAAACAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp AATTCCAGGTCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTTTCATCTGGCGTTTTaGCATCTCCTCTCCCATTTC +
Preference number: 4 (lower is better)
Translates to: NSRSFLTRRSRALYSPARFHLAF*HLLSHF
Trigger: GAAATGGGAGAGGAGATGCCAAAACGCCAGATGAAA...CCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGACCTGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp CATCTCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAATGCTACCGTCACCTACAGTCCGGCCCGGTaGGGAGGAGGGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HLLSHFICTVYLGNATVTYSPAR*GGGREG
Trigger: GCCTTCCCTCCCTCCTCCCCACCGGGCCGGACTGTA...GGTGACGGTAGCATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCACAGTGAGACTCTGCTaGGAAAGGGCGGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSATVRLC*ERAGMA
Trigger: TGCCATCCCCGCCCTTTCCCAGCAGAGTCTCACTGT...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp GGGATTTTGTGGGTTCCACCTCCTCACCTAAGCATCCCTGGTCTACGCTATGTCGTAATCCCAGCACTTTaGGAGGACGAGGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GILWVPPPHLSIPGLRYVVIPAL*EDEEGG
Trigger: TCCACCCTCCTCGTCCTCCCAAAGTGCTGGGATTAC...GACATAGCGTAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCCGTAAGGCTCCGGGATaGAGACAGCATGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSARKAPG*RQHGQG
Trigger: TCCCTGTCCATGCTGTCTCCATCCCGGAGCCTTACG...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCGGAGCTTCCGAATTCTaGGACACTGGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSAGASEF*DTGLSS
Trigger: GGAGCTGAGCCCAGTGTCCCAGAATTCGGAAGCTCC...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CAA 72 bp TGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTaGCTTCCACTGCAGTTTACGGCGATGACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CVLSLGRILNPV*LPLQFTAMTSA
Trigger: GGCAGAAGTCATCGCCGTAAACTGCAGTGGAAGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GAATACGTTTGGCCTGGCCTCCGTTCTGAAAACTACAAATCACTCACTATAACAAGCAGAGCCCGTGGCTaGCAGTGTCCCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: EYVWPGLRSENYKSLTITSRARG*QCPSAT
Trigger: GGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCT...TGTTATAGTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGCCAAACGTATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCCCTGGAAGCTTCACGTaGGTCCCTGTTCCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSAPGSFT*VPVPKD
Trigger: ATCCTTTGGAACAGGGACTCACGTGAAGCTTCCAGG...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GGGATTTTGTGGGTTCCACCTCCTCACCTAAGCATCCCTGGTCTACGCTATGTCGCCCTCTTCTTTATCTaGCCTTCTAACGACCTCACC +
Preference number: 4 (lower is better)
Translates to: GILWVPPPHLSIPGLRYVALFFI*PSNDLT
Trigger: GGTGAGGTCGTTAGAAGGTCAGATAAAGAAGAGGGC...GACATAGCGTAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCAGGTGGATGTTGCAGTaGGTCTGCAGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSARWMLQ*VCSEPR
Trigger: TCTTGGCTCACTGCAGACTCACTGCAACATCCACCT...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TGTCTTGACGCTGTGAACACTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCAGCCTGGCCAACATGGTaGAACCCTGTGACTACTAAA +
Preference number: 4 (lower is better)
Translates to: CLDAVNTRPSAASYLWAAAWPTW*NPVTTK
Trigger: TTTAGTAGTCACAGGGTTTCACCATGTTGGCCAGGC...TGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAGTGTTCACAGCGTCAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCGGGCAGAAGGTACAGTaGTGGCTAGGATGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSAGQKVQ*WLGCSS
Trigger: AGAACTGCATCCTAGCCATCACTGTACCTTCTGCCC...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp AATTCCAGGTCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGGATCAAACAGGTCTTTaGAGTTCTGGAATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: NSRSFLTRRSRALYSPARDQTGL*SSGIFL
Trigger: CAGAAAGATTCCAGAACTGCAAAGACCTGTTTGATC...CCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGACCTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp GGCAGGCACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACCGTTGTCTTGTGTGCTGGATACACTaGCAGAGCTCACAGATGAGA +
Preference number: 4 (lower is better)
Translates to: GRHTKTQVCREVHTNRCLVCWIH*QSSQMR
Trigger: TCTCATCTGTGAGCTCTGCCAGTGTATCCAGCACAC...AAGACAACGGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp ACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACCGTTGTCTTTCCTTTTTCCACATTGACCACGTaGACAGGCTGGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TRRHRYVGKCTQTVVFPFSTLTT*TGWQVS
Trigger: GGAGACCTGCCAGCCTGTGCACGTGGTCAATGTGGA...AAAAGGAAAGACAACGGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCGGACTTACACTGACTTaGAGTGAGAGCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSAGLTLT*SESPHL
Trigger: CAGATGTGGGCTCTCACTGCAAGTCAGTGTAAGTCC...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp TCATGTGCAAGAGCTTTAGCTAAGTGGCAGGCTTCCCATTCTGCACCTTCTGCCTCACCTAAGCATCCCTaGTCTACGCTATGTCACGAC +
Preference number: 4 (lower is better)
Translates to: SCARALAKWQASHSAPSASPKHP*STLCHD
Trigger: GTCGTGACATAGCGTAGACCAGGGATGCTTAGGTGA...GGCAGAAGGTGCAGAATGGGAAGCCTGCCACTTAGCTAAAGCTCTTGCACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CGTTTTGGCATCTCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAATGCTAGGCAGAGCTCACAGATaGGAAACGCCCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RFGISSPISYAQFIWVMLGRAHR*ETPPGW
Trigger: CCACCCTGGGGGCGTTTCTCATCTGTGAGCTCTGCC...TAGCATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp GGCAGGCACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACCGTTGTCTTAGGTATGTCGGGAAGTaGACACAAACCGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GRHTKTQVCREVHTNRCLRYVGK*TQTVVF
Trigger: AAAGACAACGGTTTGTGTGCACTTCCCGACATACCT...AAGACAACGGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp CGTTTTGGCATCTCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAATGCTAGAAACGCCCCCAGGGTaGCCTCCTCGTGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RFGISSPISYAQFIWVMLETPPG*PPRGCP
Trigger: AGGACAACCACGAGGAGGCCACCCTGGGGGCGTTTC...TAGCATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR TCA 90 bp GAATACGTTTGGCCTGGCCTCCGTTCTGAAAACTACAAATCACTCACTATAACAACCTCACCAGATGTGTaGAGCAGCCCGGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: EYVWPGLRSENYKSLTITTSPDV*SSPAPC
Trigger: ACATGGAGCCGGGCTGCTTCACACATCTGGTGAGGT...TGTTATAGTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGCCAAACGTATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp GAATACGTTTGGCCTGGCCTCCGTTCTGAAAACTACAAATCACTCACTATAACATGCAGTTTACGGCGATaGCTTCTGCCAACGCACCGG +
Preference number: 4 (lower is better)
Translates to: EYVWPGLRSENYKSLTITCSLRR*LLPTHR
Trigger: CCGGTGCGTTGGCAGAAGTCATCGCCGTAAACTGCA...TGTTATAGTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGCCAAACGTATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp TGGCGTTTTGGCATCTCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAATGTGTTGTGCGCCTCCATaGTCCGGTTCTGGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: WRFGISSPISYAQFIWVMCCAPP*SGSGCS
Trigger: CGAGCAACCAGAACCGGAGCATGGAGGCGCACAACA...CATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCGGGCAAGGCCAGAGATaGTGGTCAAGGGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETGQGQR*WSRAGM
Trigger: CATCCCCGCCCTTGACCAGCATCTCTGGCCTTGCCC...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCCAAGGCCAGAGATGCTaGTCAAGGGCGGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETQGQRC*SRAGMS
Trigger: CGACATCCCCGCCCTTGACCAGCATCTCTGGCCTTG...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp TCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAATGCTACCGTCACCAGCAATGTCTTCCGTGTGCTaGATACACTGGCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPISYAQFIWVMLPSPAMSSVC*IHWQSS
Trigger: TGAGCTCTGCCAGTGTATCCAGCACACGGAAGACAT...TGCTGGTGACGGTAGCATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR TCA 90 bp GAATACGTTTGGCCTGGCCTCCGTTCTGAAAACTACAAATCACTCACTATAACAGGCAGCCCTGCAGTGTaGAAAGCAATGGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: EYVWPGLRSENYKSLTITGSPAV*KAMGFC
Trigger: ACAAAATCCCATTGCTTTTCACACTGCAGGGCTGCC...TGTTATAGTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGCCAAACGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR GCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCGGGGTGACCATGAAATaGCTGGTCAAAAACCCGGGC +
Preference number: 4 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETGVTMK*LVKNPG
Trigger: GCCCGGGTTTTTGACCAGGCATTTCATGGTCACCCC...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCGCTGCTGACAGTCCCTaGGGACTTACACTGACTTGC +
Preference number: 4 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETAADSP*GLTLTC
Trigger: GCAAGTCAGTGTAAGTCCCCAGGGACTGTCAGCAGC...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp CACGAAGACACAGGTATGTCGGGAAGTGCACACAAACCGTTGTCTTTCCTTTTTGCAGCATCTGTTTATTaGCAATTCCAGGTCATTCCT +
Preference number: 4 (lower is better)
Translates to: HEDTGMSGSAHKPLSFLFAASVY*QFQVIP
Trigger: AGGAATGACCTGGAATTGTCAATAAACAGATGCTGC...AAAAAGGAAAGACAACGGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp GAATACGTTTGGCCTGGCCTCCGTTCTGAAAACTACAAATCACTCACTATAACACGGGGATGGCAAGAGTaGCAATACATAGACAATGCT +
Preference number: 4 (lower is better)
Translates to: EYVWPGLRSENYKSLTITRGWQE*QYIDNA
Trigger: AGCATTGTCTATGTATTGGCACTCTTGCCATCCCCG...TGTTATAGTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGCCAAACGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CAA 72 bp GAAGGAATGTTCTCTCCCATTATTTCTTCTAACAGCTaGGTTAGCAAGCTCCGCCCTCTTCTTTATCTGACC +
Preference number: 4 (lower is better)
Translates to: EGMFSPIISSNS*VSKLRPLLYLT
Trigger: GGTCAGATAAAGAAGAGGGCGGAGCTTGCTAACCAAGCTGTTAGAAGAAATAATGGGAGAGAACATTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp ACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACCGTTGTCTTTCCTTTTTATGCACAGTTTATTTaGGTAATGCTACCGTCACCA +
Preference number: 4 (lower is better)
Translates to: TRRHRYVGKCTQTVVFPFYAQFI*VMLPSP
Trigger: TGGTGACGGTAGCATTACCCAAATAAACTGTGCATA...AAAAGGAAAGACAACGGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp GAATACGTTTGGCCTGGCCTCCGTTCTGAAAACTACAAATCACTCACTATAACACAGTGTGAAAAGCAATaGGATTTTGTGGGTTCCACC +
Preference number: 4 (lower is better)
Translates to: EYVWPGLRSENYKSLTITQCEKQ*DFVGST
Trigger: GGTGGAACCCACAAAATCCCATTGCTTTTCACACTG...TGTTATAGTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGCCAAACGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR TCA 90 bp ATCTGGCGTTTTGGCATCTCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAAGGAAGGAAAAAGTATaGACAACAGGAAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: IWRFGISSPISYAQFIWVRKEKV*TTGSSR
Trigger: TCTGGAGCTTCCTGTTGTTCATACTTTTTCCTTCCT...TACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACGCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR GCA 90 bp ACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACCGTTGTCTTTCCTTTTAAGAAGAAACTTGATTaGTTTCATCTGGCGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TRRHRYVGKCTQTVVFPFKKKLD*FHLAFW
Trigger: CCAAAACGCCAGATGAAAGCAATCAAGTTTCTTCTT...AAAAGGAAAGACAACGGTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CCA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCATACATAGACAATGCTaGGCAAGGCCAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETIHRQC*ARPEML
Trigger: CAGCATCTCTGGCCTTGCCCAGCATTGTCTATGTAT...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
3UTR CAA 72 bp CGGGCACTGATTGTCATAACCATTATGCAACTGGTGTaGCGTCCATCAGAATCTAGTTTAAGAATACTCTTC +
Preference number: 4 (lower is better)
Translates to: RALIVITIMQLV*RPSESSLRILF
Trigger: GAAGAGTATTCTTAAACTAGATTCTGATGGACGCAACACCAGTTGCATAATGGTTATGACAATCAGTGCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CCA 90 bp CGTTTTGGCATCTCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAATGCTATTGATTGCTTTCATCTaGCGTTTTGGCATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RFGISSPISYAQFIWVMLLIAFI*RFGISS
Trigger: AGAGGAGATGCCAAAACGCCAGATGAAAGCAATCAA...TAGCATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS CCA 90 bp CCACCCTACCGCGGCGCTTCCGCGCGAACAAAATGGCGGCCGCGGTaGCCGGAAGCGGGCGACGCGAAACGACGGCGCCGGCGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: PPYRGASARTKWRPR*PEAGDAKRRRRRCS
Trigger: GCTACACCGCCGGCGCCGTCGTTTCGCGTCGCCCGCTTCCGGCCACCGCGGCCGCCATTTTGTTCGCGCGGAAGCGCCGCGGTAGGGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS CCA 90 bp CCGCTTGGGTTCCCACCCTACCGCGGCGCTTCCGCGCGAACAAAATaGCGGCCGCGGTGGCCGGAAGCGGGCGACGCGAAACGACGGCGC +
Preference number: 5 (lower is better)
Translates to: PLGFPPYRGASARTK*RPRWPEAGDAKRRR
Trigger: GCGCCGTCGTTTCGCGTCGCCCGCTTCCGGCCACCGCGGCCGCCATTTTGTTCGCGCGGAAGCGCCGCGGTAGGGTGGGAACCCAAGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CAA 90 bp GCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGGGGAGGAGGGAGGGAAGGCACCGCGGCTCTCCCGCTaGGGTTCCCACCCTACCGCG +
Preference number: 5 (lower is better)
Translates to: AAAGLCTVRPGGEEGGKAPRLSR*GSHPTA
Trigger: CGCGGTAGGGTGGGAACCCAAGCGGGAGAGCCGCGG...TGCCTTCCCTCCCTCCTCCCCACCGGGCCGGACTGTACAGAGCCCTGCTGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS CCA 90 bp GGACGACGGCATGGCGGCGGCCGCAAATCCCGCGGCTCTCCCGCTTaGGTTCCCACCCTACCGCGGCGCTTCCGCGCGAACAAAATGGCG +
Preference number: 5 (lower is better)
Translates to: GRRHGGGRKSRGSPA*VPTLPRRFRANKMA
Trigger: CGCCATTTTGTTCGCGCGGAAGCGCCGCGGTAGGGTGGGAACCCAAGCGGGAGAGCCGCGGGATTTGCGGCCGCCGCCATGCCGTCGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS GCA 90 bp GGCTGCAGCCAGCACATGGGTGGTTCAGCGACCAGCGGCCCTGCCTaGCTTCCAGGGTGCTTCACACTCAGGTCTGCTCCCCGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: GCSQHMGGSATSGPA*LPGCFTLRSAPRPP
Trigger: CGGGGGCCGGGGAGCAGACCTGAGTGTGAAGCACCCTGGAAGGCAGGCAGGGCCGCTGGTCGCTGAACCACCCATGTGCTGGCTGCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378725.3
CDS GCA 90 bp ATGAGGCTGCAGCCAGCACATGGGTGGTTCAGCGACCAGCGGCCCTaGCTGCCTTCCAGGGTGCTTCACACTCAGGTCTGCTCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: MRLQPAHGWFSDQRP*LPSRVLHTQVCSPA
Trigger: GGCCGGGGAGCAGACCTGAGTGTGAAGCACCCTGGAAGGCAGGCAGGGCCGCTGGTCGCTGAACCACCCATGTGCTGGCTGCAGCCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378725.3
CDS TCA 90 bp GCAGCCGGGACGAAGGCCTGGACAGCGGAGTGGGCCATGCCCTGGTaGGGCAGGGGCCTCACTGTCCTAGGAGGTCCCACAGAAAACAAA +
Preference number: 5 (lower is better)
Translates to: AAGTKAWTAEWAMPW*GRGLTVLGGPTENK
Trigger: TTTGTTTTCTGTGGGACCTCCTAGGACAGTGAGGCCCCTGCCTCACCAGGGCATGGCCCACTCCGCTGTCCAGGCCTTCGTCCCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 90 bp GGAGAAAAGAGGCCCCTTGAAGCCCATGAGGCTGCAGCCAGCACATaGGTGGTTCAGCGACCAGCGGCCCTGCCTGCCTTCCAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: GEKRPLEAHEAAAST*VVQRPAALPAFQGA
Trigger: AGCACCCTGGAAGGCAGGCAGGGCCGCTGGTCGCTGAACCACCCATGTGCTGGCTGCAGCCTCATGGGCTTCAAGGGGCCTCTTTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378725.3
CDS CCA 90 bp GTGAACCCCACACCGTGTCTGTGCGCCTCACCACGCCTACTGCCATaGGTGGCACTGGAACTAACCCGTGGACGATCCGACGTGCACCAG +
Preference number: 5 (lower is better)
Translates to: VNPTPCLCASPRLLP*VALELTRGRSDVHQ
Trigger: CTGGTGCACGTCGGATCGTCCACGGGTTAGTTCCAGTGCCACCCATGGCAGTAGGCGTGGTGAGGCGCACAGACACGGTGTGGGGTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS CCA 90 bp AAAAGAGGCCCCTTGAAGCCCATGAGGCTGCAGCCAGCACATGGGTaGTTCAGCGACCAGCGGCCCTGCCTGCCTTCCAGGGTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: KRGPLKPMRLQPAHG*FSDQRPCLPSRVLH
Trigger: GTGAAGCACCCTGGAAGGCAGGCAGGGCCGCTGGTCGCTGAACCACCCATGTGCTGGCTGCAGCCTCATGGGCTTCAAGGGGCCTCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378725.3
CDS-3UTR CAA 90 bp TCCCGACCTGCACATCTCAACACCCCTGAGGCCCCACCCGGCATCGTGCCAGTGACGCTGAATCCCCGTTaGCTGAGGATGTTGTGCGCC +
Preference number: 5 (lower is better)
Translates to: SRPAHLNTPEAPPGIVPVTLNPR*LRMLCA
Trigger: GGCGCACAACATCCTCAGCAAACGGGGATTCAGCGT...CACTGGCACGATGCCGGGTGGGGCCTCAGGGGTGTTGAGATGTGCAGGTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCTGCTGTGGGGCAGATTaGCTTTCGGGCTCTCACTTG +
Preference number: 5 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSCCGAD*LSGSHL
Trigger: CAAGTGAGAGCCCGAAAGCAAATCTGCCCCACAGCA...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS GCA 90 bp GACCCTCTGCTGAACCACGTCAGGGTGAACCCCACACCGTGTCTGTaGGCCTCACCACGCCTACTGCCATGGGTGGCACTGGAACTAACC +
Preference number: 5 (lower is better)
Translates to: DPLLNHVRVNPTPCL*ASPRLLPWVALELT
Trigger: GGTTAGTTCCAGTGCCACCCATGGCAGTAGGCGTGGTGAGGCGCACAGACACGGTGTGGGGTTCACCCTGACGTGGTTCAGCAGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS GCA 90 bp ACCTTCTACCCAGACCTCTCCCCTCACTGCTGGCCCGGCCCAAGCTaGCCTTGGCCTCAGTCACTGTGTCTCCGCAGTCGGATCCTTCTT +
Preference number: 5 (lower is better)
Translates to: TFYPDLSPHCWPGPS*PWPQSLCLRSRILL
Trigger: AAGAAGGATCCGACTGCGGAGACACAGTGACTGAGGCCAAGGGCAGCTTGGGCCGGGCCAGCAGTGAGGGGAGAGGTCTGGGTAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS-3UTR CAA 90 bp TCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGGGGAGGAACGCTGAATCCCCGTTaGCTGAGGATGTTGTGCGCC +
Preference number: 5 (lower is better)
Translates to: SFLTRRSRALYSPARWGGTLNPR*LRMLCA
Trigger: GGCGCACAACATCCTCAGCAAACGGGGATTCAGCGT...TCCTCCCCACCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS TCA 90 bp ATCCTTGGGTCACTGTCAGCAGCGTGGAAGTCACACACCCACCCCTaGCGTGTGTCTCCTCCTGCACATTGGAGTCCCGCCTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: ILGSLSAAWKSHTHP*RVSPPAHWSPACVP
Trigger: GGGGACACAGGCGGGACTCCAATGTGCAGGAGGAGACACACGTCAGGGGTGGGTGTGTGACTTCCACGCTGCTGACAGTGACCCAAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS-3UTR CAA 90 bp CCACAGGGAACTGCCTGGGGACTTCACTCCTCTCCAGGCCAAGGGCATCATGTGCCGCTACACTCCACCTaGGGCAACAGGGTGAGACTC +
Preference number: 5 (lower is better)
Translates to: PQGTAWGLHSSPGQGHHVPLHST*GNRVRL
Trigger: GAGTCTCACCCTGTTGCCCAAGGTGGAGTGTAGCGG...CACATGATGCCCTTGGCCTGGAGAGGAGTGAAGTCCCCAGGCAGTTCCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS TCA 90 bp AAGCTCTCGCAAAGACAGAGGAGCCAGTGTGTGCACTGCACAGGGTaGCACGCCTCCTGTGCCCGAGCCACACGTAACACCTTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: KLSQRQRSQCVHCTG*HASCARATRNTFQG
Trigger: TCCCTGGAAGGTGTTACGTGTGGCTCGGGCACAGGAGGCGTGTCACCCTGTGCAGTGCACACACTGGCTCCTCTGTCTTTGCGAGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp GCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGGGGAGGAGGGAGGGAAGGCAATATGCACAGTTTATTaGGGTAATGCTACCGTCACC +
Preference number: 5 (lower is better)
Translates to: AAAGLCTVRPGGEEGGKAICTVY*GNATVT
Trigger: GGTGACGGTAGCATTACCCAAATAAACTGTGCATAT...TGCCTTCCCTCCCTCCTCCCCACCGGGCCGGACTGTACAGAGCCCTGCTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CAA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTGAGGCAGAGAATCGCTaGAACTTGGGAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: AMTSANAPAAVGQICFRAEAENR*NLGGGG
Trigger: ACCTCCCCCTCCCAAGTTCAAGCGATTCTCTGCCTC...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS CCA 90 bp CGCCTCACCACGCCTACTGCCATGGGTGGCACTGGAACTAACCCGTaGACGATCCGACGTGCACCAGGAATAGAAACCAAGCTCTCGCAA +
Preference number: 5 (lower is better)
Translates to: RLTTPTAMGGTGTNP*TIRRAPGIETKLSQ
Trigger: TTGCGAGAGCTTGGTTTCTATTCCTGGTGCACGTCGGATCGTCCACGGGTTAGTTCCAGTGCCACCCATGGCAGTAGGCGTGGTGAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS GCA 90 bp GTCTCCGCAGTCGGATCCTTCTTCCTCCCTCTGCTCCCTGTGCAGTaGATGCTGGCTCTGAAACCTCAGCCCTTCAGCAGAGACAAAGCA +
Preference number: 5 (lower is better)
Translates to: VSAVGSFFLPLLPVQ*MLALKPQPFSRDKA
Trigger: TGCTTTGTCTCTGCTGAAGGGCTGAGGTTTCAGAGCCAGCATGCACTGCACAGGGAGCAGAGGGAGGAAGAAGGATCCGACTGCGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS-3UTR CAA 90 bp CCAAAGCAGAGCCCGTGGCTGACAGTGTCCCAGCGCCACCCCTGCTGCCACTCCATTATGCAACTGGTGTaGCGTCCATCAGAATCTAGT +
Preference number: 5 (lower is better)
Translates to: PKQSPWLTVSQRHPCCHSIMQLV*RPSESS
Trigger: ACTAGATTCTGATGGACGCAACACCAGTTGCATAAT...GGAGTGGCAGCAGGGGTGGCGCTGGGACACTGTCAGCCACGGGCTCTGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp TTCCAGGTCATTCCTAACACGCCGCAGCAGGGCTCTGTACAGTCCGGCCCGGTGCTTTCATCTGGCGTTTaGGCATCTCCTCTCCCATTT +
Preference number: 5 (lower is better)
Translates to: FQVIPNTPQQGSVQSGPVLSSGV*ASPLPF
Trigger: AAATGGGAGAGGAGATGCCAAAACGCCAGATGAAAG...CACCGGGCCGGACTGTACAGAGCCCTGCTGCGGCGTGTTAGGAATGACCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS GCA 90 bp ACGCTGATACAAAAACCAAGAGGGCAAGACAGTCGAGGAGGGAGATaGCACAGCCTCACTGACTATGGGATGGTGGAGGGCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: TLIQKPRGQDSRGGR*HSLTDYGMVEGRMR
Trigger: CCTCATCCTGCCCTCCACCATCCCATAGTCAGTGAGGCTGTGGCATCTCCCTCCTCGACTGTCTTGCCCTCTTGGTTTTTGTATCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 90 bp ATTGAAGTGGTTGATCTAACGGCATCTGACCCTGAGCTGCATCCTTaGGTCACTGTCAGCAGCGTGGAAGTCACACACCCACCCCTGACG +
Preference number: 5 (lower is better)
Translates to: IEVVDLTASDPELHP*VTVSSVEVTHPPLT
Trigger: CGTCAGGGGTGGGTGTGTGACTTCCACGCTGCTGACAGTGACCCAAGGATGCAGCTCAGGGTCAGATGCCGTTAGATCAACCACTTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS-3UTR CAA 90 bp GCGATGACTTCTGCCAACGCACCGGCTGCTGTGGGGCAGATTTGCTTTCGGGCTGAGTTCAAGACCAGTTaGGTCAAGATGGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: AMTSANAPAAVGQICFRAEFKTS*VKMVKP
Trigger: GGGTTTCACCATCTTGACCAAACTGGTCTTGAACTC...AGCCCGAAAGCAAATCTGCCCCACAGCAGCCGGTGCGTTGGCAGAAGTCATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp AGATGTGTGAAGCAGCCCGGCTCCATGTGTATCAGGCACGCACGCACACACGCAATCTTGAACCCCGTCTaGCTTCCACTGCAGTTTACG +
Preference number: 5 (lower is better)
Translates to: RCVKQPGSMCIRHARTHAILNPV*LPLQFT
Trigger: CGTAAACTGCAGTGGAAGCAAGACGGGGTTCAAGAT...TGCGTGTGTGCGTGCGTGCCTGATACACATGGAGCCGGGCTGCTTCACACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS TCA 90 bp CTACACATGGGAGTTAAGGAACGTCAGAGAAAAGGCATCTGTGTATaGAGCCTGGAAGCGCCTGTGTCCTGGACACCCAGCCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LHMGVKERQRKGICV*SLEAPVSWTPSPFP
Trigger: AGGGAAGGGGCTGGGTGTCCAGGACACAGGCGCTTCCAGGCTTCATACACAGATGCCTTTTCTCTGACGTTCCTTAACTCCCATGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 90 bp AAGCAATGGGATTTTGTGGGTTCCACCTCCTCACCTAAGCATCCCTaGTCTACGCTATGTCACGACCCTCTGCTGAACCACGTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: KQWDFVGSTSSPKHP*STLCHDPLLNHVRV
Trigger: CACCCTGACGTGGTTCAGCAGAGGGTCGTGACATAGCGTAGACCAGGGATGCTTAGGTGAGGAGGTGGAACCCACAAAATCCCATTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp GACAGGGACCTCGCACAAAGGCATGTCGGGAGGGCCTCCTTTCCAAGGCACAGCCTGGGATACAGTTCTTaGTCTTTCCTAAGAAGATCA +
Preference number: 5 (lower is better)
Translates to: DRDLAQRHVGRASFPRHSLGYSS*SFLRRS
Trigger: TGATCTTCTTAGGAAAGACAAAGAACTGTATCCCAG...GCTGTGCCTTGGAAAGGAGGCCCTCCCGACATGCCTTTGTGCGAGGTCCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp CTCGACCAAGTGCTGCGTCTTATCTTTGGGCCGCATCTTGAACCCCGTCTTGCTATTTCTTCTAACAGCTaGGTTAGCAAGCTCCGCCCT +
Preference number: 5 (lower is better)
Translates to: LDQVLRLIFGPHLEPRLAISSNS*VSKLRP
Trigger: AGGGCGGAGCTTGCTAACCAAGCTGTTAGAAGAAAT...AGCAAGACGGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCACTTGGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp GGGAGGGAAGGCAGGCACACGAAGACACAGGTATGTCGGGAAGTGCACACAAACAGATCAAACAGGTCTTaGCAGTTCTGGAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: GREGRHTKTQVCREVHTNRSNRS*QFWNLS
Trigger: AGAAAGATTCCAGAACTGCAAAGACCTGTTTGATCT...GTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCCTTCCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS-3UTR CAA 90 bp GAATACGTTTGGCCTGGCCTCCGTTCTGAAAACTACAAATCACTCACTATAACAGAGAATCGCTTGAACTaGGGAGGGGGAGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: EYVWPGLRSENYKSLTITENRLN*GGGGCS
Trigger: ACTGCAACCTCCCCCTCCCAAGTTCAAGCGATTCTC...TGTTATAGTGAGTGATTTGTAGTTTTCAGAACGGAGGCCAGGCCAAACGTATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCTCTTTGGGCCGCATCTaGAACCCCGTCTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETSLGRI*NPVLLP
Trigger: TGGAAGCAAGACGGGGTTCAAGATGCGGCCCAAAGA...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS-3UTR CAA 90 bp CCTAATTTATTTAATTATCAGAAATTCTGCGAGGTGGGCATGCACAGAGAAACCTGCTGCGTCTTATCTTaGGGCCGCATCTTGAACCCC +
Preference number: 5 (lower is better)
Translates to: PNLFNYQKFCEVGMHRETCCVLS*GRILNP
Trigger: GGGGTTCAAGATGCGGCCCAAAGATAAGACGCAGCA...GGTTTCTCTGTGCATGCCCACCTCGCAGAATTTCTGATAATTAAATAAATTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS CCA 90 bp TTCTGTCCAGCATATGTAAAATCCCATTCTGTGTATAGCTACACATaGGAGTTAAGGAACGTCAGAGAAAAGGCATCTGTGTATGAAGCC +
Preference number: 5 (lower is better)
Translates to: FCPAYVKSHSVYSYT*ELRNVREKASVYEA
Trigger: GGCTTCATACACAGATGCCTTTTCTCTGACGTTCCTTAACTCCCATGTGTAGCTATACACAGAATGGGATTTTACATATGCTGGACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS-3UTR CAA 90 bp CGTTTTGGCATCTCCTCTCCCATTTCATATGCACAGTTTATTTGGGTAATGCTAAGCAGCATCTGTTTATaGACAATTCCAGGTCATTCC +
Preference number: 5 (lower is better)
Translates to: RFGISSPISYAQFIWVMLSSICL*TIPGHS
Trigger: GGAATGACCTGGAATTGTCAATAAACAGATGCTGCT...TAGCATTACCCAAATAAACTGTGCATATGAAATGGGAGAGGAGATGCCAAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS TCA 90 bp AGTAACCACTTTCAGATAAACAGCCTAGCTGACAGGAATTCTAAGTaGACTCAGCTACCTTCCTGGGTAGCAAAAATAGTTTTTATAATA +
Preference number: 5 (lower is better)
Translates to: SNHFQINSLADRNSK*TQLPSWVAKIVFII
Trigger: TATTATAAAAACTATTTTTGCTACCCAGGAAGGTAGCTGAGTTCACTTAGAATTCCTGTCAGCTAGGCTGTTTATCTGAAAGTGGTTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 72 bp CGCGGCGCTTCCGCGCGAACAAAATGGCGGCCGCGGTaGCCGGAAGCGGGCGACGCGAAACGACGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: RGASARTKWRPR*PEAGDAKRRRR
Trigger: CCGGCGCCGTCGTTTCGCGTCGCCCGCTTCCGGCCACCGCGGCCGCCATTTTGTTCGCGCGGAAGCGCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS CAA 90 bp GGGACGACGGCATGGCGGCGGCCGCAAATCCCGCGGCTCTCCCGCTaGGGTTCCCACCCTACCGCGGCGCTTCCGCGCGAACAAAATGGC +
Preference number: 6 (lower is better)
Translates to: GTTAWRRPQIPRLSR*GSHPTAALPREQNG
Trigger: GCCATTTTGTTCGCGCGGAAGCGCCGCGGTAGGGTGGGAACCCAAGCGGGAGAGCCGCGGGATTTGCGGCCGCCGCCATGCCGTCGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS CCA 72 bp TTCCCACCCTACCGCGGCGCTTCCGCGCGAACAAAATaGCGGCCGCGGTGGCCGGAAGCGGGCGACGCGAAA +
Preference number: 6 (lower is better)
Translates to: FPPYRGASARTK*RPRWPEAGDAK
Trigger: TTTCGCGTCGCCCGCTTCCGGCCACCGCGGCCGCCATTTTGTTCGCGCGGAAGCGCCGCGGTAGGGTGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291386.4
CDS GCA 72 bp CCAGACCTCTCCCCTCACTGCTGGCCCGGCCCAAGCTaGCCTTGGCCTCAGTCACTGTGTCTCCGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: PDLSPHCWPGPS*PWPQSLCLRSR
Trigger: CCGACTGCGGAGACACAGTGACTGAGGCCAAGGGCAGCTTGGGCCGGGCCAGCAGTGAGGGGAGAGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 72 bp GCCCCCGCCACTCTAGACGGGCTGTACTGGTCATGGTaGGGCCCTGCAGGCATCCCCAGACCCTGTGAGAGC +
Preference number: 6 (lower is better)
Translates to: APATLDGLYWSW*GPAGIPRPCES
Trigger: GCTCTCACAGGGTCTGGGGATGCCTGCAGGGCCCCACCATGACCAGTACAGCCCGTCTAGAGTGGCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378725.3
CDS CCA 72 bp CCCTTGAAGCCCATGAGGCTGCAGCCAGCACATGGGTaGTTCAGCGACCAGCGGCCCTGCCTGCCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: PLKPMRLQPAHG*FSDQRPCLPSR
Trigger: CCTGGAAGGCAGGCAGGGCCGCTGGTCGCTGAACCACCCATGTGCTGGCTGCAGCCTCATGGGCTTCAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378725.3
CDS CCA 72 bp AGGCCCCTTGAAGCCCATGAGGCTGCAGCCAGCACATaGGTGGTTCAGCGACCAGCGGCCCTGCCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: RPLEAHEAAAST*VVQRPAALPAF
Trigger: GAAGGCAGGCAGGGCCGCTGGTCGCTGAACCACCCATGTGCTGGCTGCAGCCTCATGGGCTTCAAGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378725.3
CDS GCA 72 bp GAAGTCACACACCCACCCCTGACGTGTGTCTCCTCCTaGACATTGGAGTCCCGCCTGTGTCCCCGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: EVTHPPLTCVSS*TLESRLCPRGP
Trigger: GGGGCCTCGGGGACACAGGCGGGACTCCAATGTGCAGGAGGAGACACACGTCAGGGGTGGGTGTGTGACTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS GCA 72 bp CTGAACCACGTCAGGGTGAACCCCACACCGTGTCTGTaGGCCTCACCACGCCTACTGCCATGGGTGGCACTG +
Preference number: 6 (lower is better)
Translates to: LNHVRVNPTPCL*ASPRLLPWVAL
Trigger: CAGTGCCACCCATGGCAGTAGGCGTGGTGAGGCGCACAGACACGGTGTGGGGTTCACCCTGACGTGGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS CCA 72 bp ACACCGTGTCTGTGCGCCTCACCACGCCTACTGCCATaGGTGGCACTGGAACTAACCCGTGGACGATCCGAC +
Preference number: 6 (lower is better)
Translates to: TPCLCASPRLLP*VALELTRGRSD
Trigger: GTCGGATCGTCCACGGGTTAGTTCCAGTGCCACCCATGGCAGTAGGCGTGGTGAGGCGCACAGACACGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS TCA 72 bp TCACTGTCAGCAGCGTGGAAGTCACACACCCACCCCTaGCGTGTGTCTCCTCCTGCACATTGGAGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: SLSAAWKSHTHP*RVSPPAHWSPA
Trigger: GGCGGGACTCCAATGTGCAGGAGGAGACACACGTCAGGGGTGGGTGTGTGACTTCCACGCTGCTGACAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 72 bp TGTCCTAGGAGGTCCCACAGAAAACAAAGTGGGCGATaGCAGGTGCTTGCTCCTCGCTGTCCCCCAACTCGG +
Preference number: 6 (lower is better)
Translates to: CPRRSHRKQSGR*QVLAPRCPPTR
Trigger: CCGAGTTGGGGGACAGCGAGGAGCAAGCACCTGCCATCGCCCACTTTGTTTTCTGTGGGACCTCCTAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS TCA 72 bp TCCTCCCTCTGCTCCCTGTGCAGTGCATGCTGGCTCTaGAACCTCAGCCCTTCAGCAGAGACAAAGCAAACC +
Preference number: 6 (lower is better)
Translates to: SSLCSLCSACWL*NLSPSAETKQT
Trigger: GGTTTGCTTTGTCTCTGCTGAAGGGCTGAGGTTTCAGAGCCAGCATGCACTGCACAGGGAGCAGAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 72 bp ACGCCTACTGCCATGGGTGGCACTGGAACTAACCCGTaGACGATCCGACGTGCACCAGGAATAGAAACCAAG +
Preference number: 6 (lower is better)
Translates to: TPTAMGGTGTNP*TIRRAPGIETK
Trigger: CTTGGTTTCTATTCCTGGTGCACGTCGGATCGTCCACGGGTTAGTTCCAGTGCCACCCATGGCAGTAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359060.5
CDS CCA 72 bp AGGAACGTCAGAGAAAAGGCATCTGTGTATGAAGCCTaGAAGCGCCTGTGTCCTGGACACCCAGCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: RNVREKASVYEA*KRLCPGHPAPS
Trigger: GGAAGGGGCTGGGTGTCCAGGACACAGGCGCTTCCAGGCTTCATACACAGATGCCTTTTCTCTGACGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 72 bp GTTGATCTAACGGCATCTGACCCTGAGCTGCATCCTTaGGTCACTGTCAGCAGCGTGGAAGTCACACACCCA +
Preference number: 6 (lower is better)
Translates to: VDLTASDPELHP*VTVSSVEVTHP
Trigger: TGGGTGTGTGACTTCCACGCTGCTGACAGTGACCCAAGGATGCAGCTCAGGGTCAGATGCCGTTAGATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS TCA 72 bp TCACTTCCCCAAAAAGAGAGACTGGGTTCCCAAAGATaGGCTCTGTGGTCTGCAGGAGCTCATTTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: SLPQKERLGSQR*ALWSAGAHLSH
Trigger: ATGGCTCAAATGAGCTCCTGCAGACCACAGAGCTCATCTTTGGGAACCCAGTCTCTCTTTTTGGGGAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS CCA 72 bp GCATATGTAAAATCCCATTCTGTGTATAGCTACACATaGGAGTTAAGGAACGTCAGAGAAAAGGCATCTGTG +
Preference number: 6 (lower is better)
Translates to: AYVKSHSVYSYT*ELRNVREKASV
Trigger: CACAGATGCCTTTTCTCTGACGTTCCTTAACTCCCATGTGTAGCTATACACAGAATGGGATTTTACATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378726.1
CDS TCA 72 bp TTTCAGATAAACAGCCTAGCTGACAGGAATTCTAAGTaGACTCAGCTACCTTCCTGGGTAGCAAAAATAGTT +
Preference number: 6 (lower is better)
Translates to: FQINSLADRNSK*TQLPSWVAKIV
Trigger: AACTATTTTTGCTACCCAGGAAGGTAGCTGAGTTCACTTAGAATTCCTGTCAGCTAGGCTGTTTATCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378726.1