RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SSTR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000132671

Ensembl transcript IDs: ENST00000255008.5

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGCAGCGGGTAGGCTCACCCTACACCCCCACCCCGCCACCACCTaGATGACTTATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCAT +
Preference number: 1 (lower is better)
Translates to: RAAGRLTLHPHPATT*MTYDCRVKGSVHAH
Trigger: ATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATAAGTCATGCAGGTGGTGGCGGGGTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp ACAGGAAGACTGCTCCCAGCTCAGGGCAACTCAGGGAGACACCTGTaGCAGCAAGCAGATGTTATTCCCAGGCCGGGGGTGAGTGGGGAG +
Preference number: 1 (lower is better)
Translates to: TGRLLPAQGNSGRHL*QQADVIPRPGVSGE
Trigger: CTCCCCACTCACCCCCGGCCTGGGAATAACATCTGCTTGCTGTCACAGGTGTCTCCCTGAGTTGCCCTGAGCTGGGAGCAGTCTTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 90 bp TCCTCTATCCAAAACCTGGGCTGGTTCCCATCCCTCGCTGCTCTCTaGTCAGCTTTTCCCGCCCATGGCTCCTCTCTCACTCACCACCAC +
Preference number: 1 (lower is better)
Translates to: SSIQNLGWFPSLAAL*SAFPAHGSSLTHHH
Trigger: GTGGTGGTGAGTGAGAGAGGAGCCATGGGCGGGAAAAGCTGACCAGAGAGCAGCGAGGGATGGGAACCAGCCCAGGTTTTGGATAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp GGCAGGTACATGGGCTGCTGGAAGGAACAGGTGGTGGAGCTTAGGTaGGCATTCAGGAGATGCAGTCTTCGGGGCTGTAGGAATGGTGCC +
Preference number: 1 (lower is better)
Translates to: GRYMGCWKEQVVELR*AFRRCSLRGCRNGA
Trigger: GGCACCATTCCTACAGCCCCGAAGACTGCATCTCCTGAATGCTCACCTAAGCTCCACCACCTGTTCCTTCCAGCAGCCCATGTACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp CAGAGCGTCTGCAGAGAGGAAGGGTGCTACCTCCCTCCACCTTCTTaGGTCCTCTCCCAAGCAGTGGCTGTAAGGAGTCACACACAGGGA +
Preference number: 1 (lower is better)
Translates to: QSVCREEGCYLPPPS*VLSQAVAVRSHTQG
Trigger: TCCCTGTGTGTGACTCCTTACAGCCACTGCTTGGGAGAGGACTCAAGAAGGTGGAGGGAGGTAGCACCCTTCCTCTCTGCAGACGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp CACGTACAAGCTGGGAAGAAGCCCTGGGGACCACTGCCAGTGCTGTaGACCCCTCACCTCACTACTATCAACCTGGGTGGTCCTTGGAGT +
Preference number: 1 (lower is better)
Translates to: HVQAGKKPWGPLPVL*TPHLTTINLGGPWS
Trigger: ACTCCAAGGACCACCCAGGTTGATAGTAGTGAGGTGAGGGGTTCACAGCACTGGCAGTGGTCCCCAGGGCTTCTTCCCAGCTTGTACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 90 bp AGCTGCTTCCTCTATCCAAAACCTGGGCTGGTTCCCATCCCTCGCTaGTCTCTGGTCAGCTTTTCCCGCCCATGGCTCCTCTCTCACTCA +
Preference number: 1 (lower is better)
Translates to: SCFLYPKPGLVPIPR*SLVSFSRPWLLSHS
Trigger: TGAGTGAGAGAGGAGCCATGGGCGGGAAAAGCTGACCAGAGAGCAGCGAGGGATGGGAACCAGCCCAGGTTTTGGATAGAGGAAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 90 bp GCTCATTTTCCAGTGGTGATGGAAGGAGGACTAAGCAGAGAAGCGTaGTATCTCCTGCCCTCCCACCATTTGATTCGCGTGTCTCCACGG +
Preference number: 1 (lower is better)
Translates to: AHFPVVMEGGLSREA*YLLPSHHLIRVSPR
Trigger: CCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCCTTCCATCACCACTGGAAAATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 90 bp ACCCCATGTCATGTCTCTCCAAACCTTTTCTACTCACAGGAAGACTaGTCCCAGCTCAGGGCAACTCAGGGAGACACCTGTGACAGCAAG +
Preference number: 1 (lower is better)
Translates to: TPCHVSPNLFYSQED*SQLRATQGDTCDSK
Trigger: CTTGCTGTCACAGGTGTCTCCCTGAGTTGCCCTGAGCTGGGAGCAGTCTTCCTGTGAGTAGAAAAGGTTTGGAGAGACATGACATGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 90 bp CCCTCCCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATaGAGAGTTTACAGCTGGGAAGAGCTCAAAACTCGAACCTCCCTT +
Preference number: 1 (lower is better)
Translates to: PSHHLIRVSPRCLCQ*RVYSWEELKTRTSL
Trigger: AAGGGAGGTTCGAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 90 bp GACCACTGCCAGTGCTGTGAACCCCTCACCTCACTACTATCAACCTaGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: DHCQCCEPLTSLLST*VVLGVPFNHIHQCP
Trigger: TGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCAGGTTGATAGTAGTGAGGTGAGGGGTTCACAGCACTGGCAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp AGGTGCCCTGTCTTGCTTATCAGAGAGTTTGCCCAGTCTGATCACTaGGAGACTAAAGAAAGGACCCCCAACCCCACGTACAAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: RCPVLLIREFAQSDH*ETKERTPNPTYKLG
Trigger: TCCCAGCTTGTACGTGGGGTTGGGGGTCCTTTCTTTAGTCTCTCAGTGATCAGACTGGGCAAACTCTCTGATAAGCAAGACAGGGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp AGCAGGCAGAACAAGATGACCATCGAAGCAAGCCTCCCAGGCAGGTaGCATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATG +
Preference number: 1 (lower is better)
Translates to: SRQNKMTIEASLPGR*HMLVAFRILAVCLM
Trigger: CATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCTGGGAGGCTTGCTTCGATGGTCATCTTGTTCTGCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 90 bp ACTGCCAGTGCTGTGAACCCCTCACCTCACTACTATCAACCTGGGTaGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCT +
Preference number: 1 (lower is better)
Translates to: TASAVNPSPHYYQPG*SLEFRSTIFISAHP
Trigger: AGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCAGGTTGATAGTAGTGAGGTGAGGGGTTCACAGCACTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 90 bp ATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTaGGAAGAGCTCAAAACTCGAACCTCCCTTGGCACATATTCCAAG +
Preference number: 1 (lower is better)
Translates to: IRVSPRCLCQCRVYS*EELKTRTSLGTYSK
Trigger: CTTGGAATATGTGCCAAGGGAGGTTCGAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp GATGCCCAAGGTATCCCTGGTGGGTGCCAACAAATTAGAGATGGTTaGTGTCTCTGTGTGTGTGCATGTGTGTTTGCAGGATCAGAGGGT +
Preference number: 1 (lower is better)
Translates to: DAQGIPGGCQQIRDG*CLCVCACVFAGSEG
Trigger: ACCCTCTGATCCTGCAAACACACATGCACACACACAGAGACATCAACCATCTCTAATTTGTTGGCACCCACCAGGGATACCTTGGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 90 bp AGCCACACACTAGTGTTGCCAAGACTCCTGGTAGGTGCCCTGTCTTaGTTATCAGAGAGTTTGCCCAGTCTGATCACTGAGAGACTAAAG +
Preference number: 1 (lower is better)
Translates to: SHTLVLPRLLVGALS*LSESLPSLITERLK
Trigger: CTTTAGTCTCTCAGTGATCAGACTGGGCAAACTCTCTGATAAGCAAGACAGGGCACCTACCAGGAGTCTTGGCAACACTAGTGTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 90 bp CCCGCCCATGGCTCCTCTCTCACTCACCACCACAGTATAAATTGCTaGCTTAATGAGTTCTCATGTTCCCACATCAAAGGATCAGGGAAA +
Preference number: 1 (lower is better)
Translates to: PAHGSSLTHHHSINC*LNEFSCSHIKGSGK
Trigger: TTTCCCTGATCCTTTGATGTGGGAACATGAGAACTCATTAAGGCAGCAATTTATACTGTGGTGGTGAGTGAGAGAGGAGCCATGGGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 90 bp TTTCCCGCCCATGGCTCCTCTCTCACTCACCACCACAGTATAAATTaGTGCCTTAATGAGTTCTCATGTTCCCACATCAAAGGATCAGGG +
Preference number: 1 (lower is better)
Translates to: FPAHGSSLTHHHSIN*CLNEFSCSHIKGSG
Trigger: CCCTGATCCTTTGATGTGGGAACATGAGAACTCATTAAGGCAGCAATTTATACTGTGGTGGTGAGTGAGAGAGGAGCCATGGGCGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 90 bp GTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTaGCAGGCATTGTCAGACACTGAGGAACAAAGAAATAATGCAGTT +
Preference number: 1 (lower is better)
Translates to: VVLGVPFNHIHQCPS*QALSDTEEQRNNAV
Trigger: AACTGCATTATTTCTTTGTTCCTCAGTGTCTGACAATGCCTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 90 bp GTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACTTCAATTCATTaGAGTCTTCTGTACACAAACTACAAGGGAGGGTTTCATGCAACC +
Preference number: 1 (lower is better)
Translates to: VAFRILAVCLMTSIH*SLLYTNYKGGFHAT
Trigger: GGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGAAGACTGCAATGAATTGAAGTCATGAGACATACAGCCAGGATCCTGAAAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp GTCTCTGTGTGTGTGCATGTGTGTTTGCAGGATCAGAGGGTTCTCTaGCTTAGTTTTGAAACTTCCATTCCACAGTCATGTCTCCAGTAT +
Preference number: 1 (lower is better)
Translates to: VSVCVHVCLQDQRVL*LSFETSIPQSCLQY
Trigger: ATACTGGAGACATGACTGTGGAATGGAAGTTTCAAAACTAAGTCAGAGAACCCTCTGATCCTGCAAACACACATGCACACACACAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 90 bp GGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATaGCTTCAATTCATTGCAGTCTTCTGTACACAAACTACAAGGGAG +
Preference number: 1 (lower is better)
Translates to: GDICWWLSGSWLYVS*LQFIAVFCTQTTRE
Trigger: CTCCCTTGTAGTTTGTGTACAGAAGACTGCAATGAATTGAAGTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACATGGTGCCCACCCCTTaGGAGGTGGCCACGCAGGGT +
Preference number: 2 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHMVPTP*EVATQG
Trigger: ACCCTGCGTGGCCACCTCCCAAGGGGTGGGCACCAT...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 90 bp GCAGAGCGTCTGCAGAGAGGAAGGGTGCTACCTCCCTCCACCTTCTaGAGTCCTCTCCCAAGCAGTGGCTGTAAGGAGTCACACACAGGG +
Preference number: 2 (lower is better)
Translates to: AERLQRGRVLPPSTF*SPLPSSGCKESHTG
Trigger: CCCTGTGTGTGACTCCTTACAGCCACTGCTTGGGAGAGGACTCAAGAAGGTGGAGGGAGGTAGCACCCTTCCTCTCTGCAGACGCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACTCTCCGGCAGGTACATaGGCTGCTGGAAGGAACAGG +
Preference number: 2 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHSPAGT*AAGRNR
Trigger: CCTGTTCCTTCCAGCAGCCCATGTACCTGCCGGAGA...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp GCTGCTCTCTGGTCAGCTTTTCCCGCCCATGGCTCCTCTCTCACTCACCACCACGTGGTGGAGCTTAGGTaGGCATTCAGGAGATGCAGT +
Preference number: 2 (lower is better)
Translates to: AALWSAFPAHGSSLTHHHVVELR*AFRRCS
Trigger: ACTGCATCTCCTGAATGCTCACCTAAGCTCCACCAC...GTGGTGGTGAGTGAGAGAGGAGCCATGGGCGGGAAAAGCTGACCAGAGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACCCACCCCTTGGGAGGTaGCCACGCAGGGTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDPPLGR*PRRVGR
Trigger: CCTACCCACCCTGCGTGGCCACCTCCCAAGGGGTGG...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACAGGTACATGGGCTGCTaGAAGGAACAGGTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHRYMGC*KEQVVE
Trigger: CTCCACCACCTGTTCCTTCCAGCAGCCCATGTACCT...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp AGCGTGCTATCTCCTGCCCTCCCACCATTTGATTCGCGTGTCTCCACGGTGTCTTCCCTCGCTGCTCTCTaGTCAGCTTTTCCCGCCCAT +
Preference number: 2 (lower is better)
Translates to: SVLSPALPPFDSRVSTVSSLAAL*SAFPAH
Trigger: ATGGGCGGGAAAAGCTGACCAGAGAGCAGCGAGGGA...AGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp ACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATGAAAAGGCCCTGAAGCTACTCCCTCCACCTTCTTaGGTCCTCTCCCAAGCAGTG +
Preference number: 2 (lower is better)
Translates to: TSAQCTSLLPGNEKALKLLPPPS*VLSQAV
Trigger: CACTGCTTGGGAGAGGACTCAAGAAGGTGGAGGGAG...TAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGCCCAGAGGTAGTCTCTaGATGCTAAGCCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQPRGSL*MLSQVG
Trigger: CCCCACCTGGCTTAGCATTCAGAGACTACCTCTGGG...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACAGCCCTGGGGACCACTaGCAGTGCTGTGAACCCCTC +
Preference number: 2 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDSPGDH*QCCEPL
Trigger: GAGGGGTTCACAGCACTGGCAGTGGTCCCCAGGGCT...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 90 bp GGAGGACTAAGCAGAGAAGCGTGCTATCTCCTGCCCTCCCACCATTaGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTAC +
Preference number: 2 (lower is better)
Translates to: GGLSREACYLLPSHH*IRVSPRCLCQCRVY
Trigger: GTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCGGTATCCCTGGTGGGTaGCAACAAATTAGAGATGGT +
Preference number: 2 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAAGIPGG*QQIRDG
Trigger: ACCATCTCTAATTTGTTGGCACCCACCAGGGATACC...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACAACCTGGGTGGTCCTTaGAGTTCCGTTCAACCATAT +
Preference number: 2 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHNLGGP*SSVQPY
Trigger: ATATGGTTGAACGGAACTCCAAGGACCACCCAGGTT...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 90 bp AGTGCTGTGAACCCCTCACCTCACTACTATCAACCTGGGTGGTCCTaGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: SAVNPSPHYYQPGWS*EFRSTIFISAHPGR
Trigger: CCTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCAGGTTGATAGTAGTGAGGTGAGGGGTTCACAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp CCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGAAGGGCATAGGGTGTTaGCCTTTGGCTGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: PPFDSRVSTVSLPMQSLQKGIGC*PLAVSP
Trigger: GGGAGAGACAGCCAAAGGTCAACACCCTATGCCCTT...CTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp CCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGAGCTTTTCCCGCCCATaGCTCCTCTCTCACTCACCA +
Preference number: 2 (lower is better)
Translates to: PPFDSRVSTVSLPMQSLQSFSRP*LLSHSP
Trigger: TGGTGAGTGAGAGAGGAGCCATGGGCGGGAAAAGCT...CTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp AGCGTGCTATCTCCTGCCCTCCCACCATTTGATTCGCGTGTCTCCACGGTGTCTTACTATCAACCTGGGTaGTCCTTGGAGTTCCGTTCA +
Preference number: 2 (lower is better)
Translates to: SVLSPALPPFDSRVSTVSYYQPG*SLEFRS
Trigger: TGAACGGAACTCCAAGGACCACCCAGGTTGATAGTA...AGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp ACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATGAAAAGGCCCTGAAGCTAATGGAAGCATCCTTTTaGAAGCCAGAGTGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: TSAQCTSLLPGNEKALKLMEASF*KPECRG
Trigger: TCCCCTGCACTCTGGCTTTCAAAAGGATGCTTCCAT...TAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAAGGCAGGTACATGGGCTaGTGGAAGGAACAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQGRYMG*WKEQVV
Trigger: CACCACCTGTTCCTTCCAGCAGCCCATGTACCTGCC...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACACTGACCTGGTTTTATaGCTTGCAATAAACCCCATG +
Preference number: 2 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHTDLVL*LAINPM
Trigger: CATGGGGTTTATTGCAAGGCATAAAACCAGGTCAGT...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp ACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATGAAAAGGCCCTGAAGCTAGAGGCTGAGGTGTCCTaGCTCTCAGAGACTTTTCTT +
Preference number: 2 (lower is better)
Translates to: TSAQCTSLLPGNEKALKLEAEVS*LSETFL
Trigger: AAGAAAAGTCTCTGAGAGGCAGGACACCTCAGCCTC...TAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACAGTGCACCTCGTTGCTaGCGGGAAATGAAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDSAPRC*REMKRP
Trigger: GGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACT...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp ACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATGAAAAGGCCCTGAAGCTAGGAAGGAACAGGTGGTaGAGCTTAGGTGAGCATTCA +
Preference number: 2 (lower is better)
Translates to: TSAQCTSLLPGNEKALKLGRNRW*SLGEHS
Trigger: TGAATGCTCACCTAAGCTCCACCACCTGTTCCTTCC...TAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp GAAGGAGGACTAAGCAGAGAAGCGTGCTATCTCCTGCCCTCCCACCATTTGATTGCTGGAAGGAACAGGTaGTGGAGCTTAGGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: EGGLSREACYLLPSHHLIAGRNR*WSLGEH
Trigger: ATGCTCACCTAAGCTCCACCACCTGTTCCTTCCAGC...AATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAACCTCTATCCAAAACCTaGGCTGGTTCCCATCCCTCG +
Preference number: 2 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMEPLSKT*AGSHPS
Trigger: CGAGGGATGGGAACCAGCCCAGGTTTTGGATAGAGG...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp TTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGACGAGACCCACAGACATaGAGACTGACTTCAGATGCC +
Preference number: 2 (lower is better)
Translates to: FDSRVSTVSLPMQSLQLGRDPQT*RLTSDA
Trigger: GGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCG...TCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp TTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGACATCAGTGCCCATCCTaGCAGGCATTGTCAGACACT +
Preference number: 2 (lower is better)
Translates to: FDSRVSTVSLPMQSLQLGHQCPS*QALSDT
Trigger: AGTGTCTGACAATGCCTGCCAGGATGGGCACTGATG...TCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 90 bp TTGCCAAGACTCCTGGTAGGTGCCCTGTCTTGCTTATCAGAGAGTTaGCCCAGTCTGATCACTGAGAGACTAAAGAAAGGACCCCCAACC +
Preference number: 2 (lower is better)
Translates to: LPRLLVGALSCLSES*PSLITERLKKGPPT
Trigger: GGTTGGGGGTCCTTTCTTTAGTCTCTCAGTGATCAGACTGGGCAAACTCTCTGATAAGCAAGACAGGGCACCTACCAGGAGTCTTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp CCAAGTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCGCAGCAGAAGAGTTCTaGCACTCTCCGGCAGGTACA +
Preference number: 2 (lower is better)
Translates to: PSSYGYTRPTDMETDFRCAAEEF*HSPAGT
Trigger: TGTACCTGCCGGAGAGTGTCAGAACTCTTCTGCTGC...GCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp GTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGGCATTGCACAGACATGGAGACTaGCTTCAGATGCCCAAGGTA +
Preference number: 2 (lower is better)
Translates to: VLGVPFNHIHQCPSWQALHRHGD*LQMPKV
Trigger: TACCTTGGGCATCTGAAGTCAGTCTCCATGTCTGTG...CAATGCCTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TCTCTGAATGCTAAGCCAGGTGGGGTCCCCCAAACTTCATACATGTTCCTATGTCTCCTGTACAAGCTGTaGTCCCACCACAAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLNAKPGGVPQTSYMFLCLLYKL*SHHKAE
Trigger: CTCTGCCTTGTGGTGGGAGCACAGCTTGTACAGGAG...ACATAGGAACATGTATGAAGTTTGGGGGACCCCACCTGGCTTAGCATTCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGGTGTGCATGTGTGTTTaGAGGATCAGAGGGTTCTCT +
Preference number: 2 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQVCMCV*RIRGFS
Trigger: AGAGAACCCTCTGATCCTGCAAACACACATGCACAC...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACGAGACTGACTTCAGATaGCCAAGGTATCCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDETDFR*PRYPWW
Trigger: CCACCAGGGATACCTTGGGCATCTGAAGTCAGTCTC...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAAATCCAAAACCTGGGCTaGTTCCCATCCCTCGCTGCT +
Preference number: 2 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQIQNLG*FPSLAA
Trigger: AGCAGCGAGGGATGGGAACCAGCCCAGGTTTTGGAT...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAATACTCACAGGAAGACTaGTCCCAGCTCAGGGCAACT +
Preference number: 2 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQYSQED*SQLRAT
Trigger: AGTTGCCCTGAGCTGGGAGCAGTCTTCCTGTGAGTA...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAACGGTGTCTCTGCCAATaGAGAGTTTACAGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMERCLCQ*RVYSWE
Trigger: TTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCG...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAACCCATTCTCTCAGAGTaGTCTGTGAGGCTGACCACT +
Preference number: 2 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQPILSE*SVRLTT
Trigger: AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGG...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp ACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATGAAAAGGCCCTGAAGCTATGCAGAGTTTACAGCTaGGAAGAGCTCAAAACTCGA +
Preference number: 2 (lower is better)
Translates to: TSAQCTSLLPGNEKALKLCRVYS*EELKTR
Trigger: TCGAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCA...TAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 90 bp GAATGTGTCTTATTCCATGCTAATCTGGGCAGCCACACACTAGTGTaGCCAAGACTCCTGGTAGGTGCCCTGTCTTGCTTATCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: ECVLFHANLGSHTLV*PRLLVGALSCLSES
Trigger: ACTCTCTGATAAGCAAGACAGGGCACCTACCAGGAGTCTTGGCAACACTAGTGTGTGGCTGCCCAGATTAGCATGGAATAAGACACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAATCAGGGAGACACCTGTaGCAGCAAGCAGATGTTATT +
Preference number: 2 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMESGRHL*QQADVI
Trigger: AATAACATCTGCTTGCTGTCACAGGTGTCTCCCTGA...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TCTCTGAATGCTAAGCCAGGTGGGGTCCCCCAAACTTCATACATGTTCCTATGTTTTCTCACCACCTCCTaGTTCCCAGCCCTTGAAGAA +
Preference number: 2 (lower is better)
Translates to: SLNAKPGGVPQTSYMFLCFLTTS*FPALEE
Trigger: TTCTTCAAGGGCTGGGAAGCAGGAGGTGGTGAGAAA...ACATAGGAACATGTATGAAGTTTGGGGGACCCCACCTGGCTTAGCATTCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTCACCCCGCCACCACCTaGATGACTTATGACTGCAGG +
Preference number: 2 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPHPATT*MTYDCR
Trigger: CCTGCAGTCATAAGTCATGCAGGTGGTGGCGGGGTG...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 90 bp TACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTGGGGTaGATGGAACTAAAGCTGGTAGCACTGTTGATGGGCTCCAAACAC +
Preference number: 2 (lower is better)
Translates to: YKGGFHATSCYKSLG*MELKLVALLMGSKH
Trigger: GTGTTTGGAGCCCATCAACAGTGCTACCAGCTTTAGTTCCATCAACCCCAGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTTGCAGAGAGGAAGGGTaGTACCTCCCTCCACCTTCT +
Preference number: 2 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPCREEG*YLPPPS
Trigger: AGAAGGTGGAGGGAGGTAGCACCCTTCCTCTCTGCA...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGACCTGGTTTTATGCCTTaGAATAAACCCCATGTCATG +
Preference number: 2 (lower is better)
Translates to: FDSRVSTVSLPMQSLQLGPGFMP*NKPHVM
Trigger: CATGACATGGGGTTTATTGCAAGGCATAAAACCAGG...TCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTCCCATACCACCAGAATaGTCATCCAGAATCAGGCCG +
Preference number: 2 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPPIPPE*SSRIRP
Trigger: CGGCCTGATTCTGGATGATCATTCTGGTGGTATGGG...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACTTCCAAGTGGGAAACTaGGGCTTAGAGAGGTTAAAT +
Preference number: 2 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDFQVGN*GLERLN
Trigger: ATTTAACCTCTCTAAGCCTCAGTTTCCCACTTGGAA...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 90 bp GGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACTTCAATTCATaGCAGTCTTCTGTACACAAACTACAAGGGAGGGTTTCATGCAAC +
Preference number: 2 (lower is better)
Translates to: GGFQDPGCMSHDFNS*QSSVHKLQGRVSCN
Trigger: GTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGAAGACTGCAATGAATTGAAGTCATGAGACATACAGCCAGGATCCTGAAAGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAACTGCTTTGTTATTACTaGCCTGGTTTTATGCCTTGC +
Preference number: 2 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQLLCYY*PGFMPC
Trigger: GCAAGGCATAAAACCAGGTCAGTAATAACAAAGCAG...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR TCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAAGATCAGAGGGTTCTCTaGCTTAGTTTTGAAACTTCC +
Preference number: 2 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQDQRVL*LSFETS
Trigger: GGAAGTTTCAAAACTAAGTCAGAGAACCCTCTGATC...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAATATGTAGTACAGACATaGCTACCCATTCTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQYVVQT*LPILSE
Trigger: CTCTGAGAGAATGGGTAGCCATGTCTGTACTACATA...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTTCACTACTATCAACCTaGGTGGTCCTTGGAGTTCCG +
Preference number: 2 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPSLLST*VVLGVP
Trigger: CGGAACTCCAAGGACCACCCAGGTTGATAGTAGTGA...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTAACCATATTCATCAGTaGCCATCCTGGCAGGCATTG +
Preference number: 2 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPNHIHQ*PSWQAL
Trigger: CAATGCCTGCCAGGATGGGCACTGATGAATATGGTT...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 90 bp GAGCTCCTCTTAAGCTCTTTCCCTTTGGGAAAGATAATTTATCCTTaGGTTAACACATCAGGCAACAAAGATACGGCCTTTTATTGTGTT +
Preference number: 2 (lower is better)
Translates to: ELLLSSFPLGKIIYP*VNTSGNKDTAFYCV
Trigger: AACACAATAAAAGGCCGTATCTTTGTTGCCTGATGTGTTAACCAAAGGATAAATTATCTTTCCCAAAGGGAAAGAGCTTAAGAGGAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR GCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTCACAGTATAAATTGCTaGCTTAATGAGTTCTCATGT +
Preference number: 2 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPHSINC*LNEFSC
Trigger: ACATGAGAACTCATTAAGGCAGCAATTTATACTGTG...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 72 bp CTGCTCCCAGCTCAGGGCAACTCAGGGAGACACCTGTaGCAGCAAGCAGATGTTATTCCCAGGCCGGGGGTG +
Preference number: 3 (lower is better)
Translates to: LLPAQGNSGRHL*QQADVIPRPGV
Trigger: CACCCCCGGCCTGGGAATAACATCTGCTTGCTGTCACAGGTGTCTCCCTGAGTTGCCCTGAGCTGGGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CAA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGAATGGTGCCCACCCCTaGGGAGGTGGCCACGCAGGG +
Preference number: 3 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQNGAHP*GGGHAG
Trigger: CCCTGCGTGGCCACCTCCCAAGGGGTGGGCACCATT...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CAA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACCTGCCCTCCCACCATTaGATTCGCGTGTCTCCACGG +
Preference number: 3 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHLPSHH*IRVSPR
Trigger: CCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAG...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 72 bp GCTGGGAAGAAGCCCTGGGGACCACTGCCAGTGCTGTaGACCCCTCACCTCACTACTATCAACCTGGGTGGT +
Preference number: 3 (lower is better)
Translates to: AGKKPWGPLPVL*TPHLTTINLGG
Trigger: ACCACCCAGGTTGATAGTAGTGAGGTGAGGGGTTCACAGCACTGGCAGTGGTCCCCAGGGCTTCTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 72 bp CTCTATCCAAAACCTGGGCTGGTTCCCATCCCTCGCTaGTCTCTGGTCAGCTTTTCCCGCCCATGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: LYPKPGLVPIPR*SLVSFSRPWLL
Trigger: GAGGAGCCATGGGCGGGAAAAGCTGACCAGAGAGCAGCGAGGGATGGGAACCAGCCCAGGTTTTGGATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 72 bp CAAAACCTGGGCTGGTTCCCATCCCTCGCTGCTCTCTaGTCAGCTTTTCCCGCCCATGGCTCCTCTCTCACT +
Preference number: 3 (lower is better)
Translates to: QNLGWFPSLAAL*SAFPAHGSSLT
Trigger: AGTGAGAGAGGAGCCATGGGCGGGAAAAGCTGACCAGAGAGCAGCGAGGGATGGGAACCAGCCCAGGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 72 bp GACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATaGAAAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGG +
Preference number: 3 (lower is better)
Translates to: DKCSVHLVAAGK*KGPEAKEESSG
Trigger: CCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 72 bp CCAGTGGTGATGGAAGGAGGACTAAGCAGAGAAGCGTaGTATCTCCTGCCCTCCCACCATTTGATTCGCGTG +
Preference number: 3 (lower is better)
Translates to: PVVMEGGLSREA*YLLPSHHLIRV
Trigger: CACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCCTTCCATCACCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 72 bp TCCAGAATCAGGCCGGTTAAACCCAGAGGTAGTCTCTaGATGCTAAGCCAGGTGGGGTCCCCCAAACTTCAT +
Preference number: 3 (lower is better)
Translates to: SRIRPVKPRGSL*MLSQVGSPKLH
Trigger: ATGAAGTTTGGGGGACCCCACCTGGCTTAGCATTCAGAGACTACCTCTGGGTTTAACCGGCCTGATTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 72 bp CAGCCACACACTAGTGTTGCCAAGACTCCTGGTAGGTaGCCTGTCTTGCTTATCAGAGAGTTTGCCCAGTCT +
Preference number: 3 (lower is better)
Translates to: QPHTSVAKTPGR*PVLLIREFAQS
Trigger: AGACTGGGCAAACTCTCTGATAAGCAAGACAGGGCACCTACCAGGAGTCTTGGCAACACTAGTGTGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 72 bp TCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTaGGAAGAGCTCAAAACTCGAACCTCCCTTGGCACA +
Preference number: 3 (lower is better)
Translates to: SPRCLCQCRVYS*EELKTRTSLGT
Trigger: TGTGCCAAGGGAGGTTCGAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CAA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAACCTGCTTCCCAGCCCTaGAAGAACAGCCAGAGGTTC +
Preference number: 3 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQPASQP*KNSQRF
Trigger: GAACCTCTGGCTGTTCTTCAAGGGCTGGGAAGCAGG...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CAA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACGGTAGGTGCCCTGTCTaGCTTATCAGAGAGTTTGCC +
Preference number: 3 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDGRCPV*LIREFA
Trigger: GGCAAACTCTCTGATAAGCAAGACAGGGCACCTACC...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 72 bp AACAAGATGACCATCGAAGCAAGCCTCCCAGGCAGGTaGCATATGTTGGTGGCTTTCAGGATCCTGGCTGTA +
Preference number: 3 (lower is better)
Translates to: NKMTIEASLPGR*HMLVAFRILAV
Trigger: TACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCTGGGAGGCTTGCTTCGATGGTCATCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 72 bp CTAGTGTTGCCAAGACTCCTGGTAGGTGCCCTGTCTTaGTTATCAGAGAGTTTGCCCAGTCTGATCACTGAG +
Preference number: 3 (lower is better)
Translates to: LVLPRLLVGALS*LSESLPSLITE
Trigger: CTCAGTGATCAGACTGGGCAAACTCTCTGATAAGCAAGACAGGGCACCTACCAGGAGTCTTGGCAACACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 72 bp TCCCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTaGCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAA +
Preference number: 3 (lower is better)
Translates to: SHHLIRVSPRCL*QCRVYSWEELK
Trigger: TTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 72 bp ACCCCTCACCTCACTACTATCAACCTGGGTGGTCCTTaGAGTTCCGTTCAACCATATTCATCAGTGCCCATC +
Preference number: 3 (lower is better)
Translates to: TPHLTTINLGGP*SSVQPYSSVPI
Trigger: GATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCAGGTTGATAGTAGTGAGGTGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 72 bp GTCTTGCTTATCAGAGAGTTTGCCCAGTCTGATCACTaGGAGACTAAAGAAAGGACCCCCAACCCCACGTAC +
Preference number: 3 (lower is better)
Translates to: VLLIREFAQSDH*ETKERTPNPTY
Trigger: GTACGTGGGGTTGGGGGTCCTTTCTTTAGTCTCTCAGTGATCAGACTGGGCAAACTCTCTGATAAGCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 72 bp CAGTGCTGTGAACCCCTCACCTCACTACTATCAACCTaGGTGGTCCTTGGAGTTCCGTTCAACCATATTCAT +
Preference number: 3 (lower is better)
Translates to: QCCEPLTSLLST*VVLGVPFNHIH
Trigger: ATGAATATGGTTGAACGGAACTCCAAGGACCACCCAGGTTGATAGTAGTGAGGTGAGGGGTTCACAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 72 bp GGTATCCCTGGTGGGTGCCAACAAATTAGAGATGGTTaGTGTCTCTGTGTGTGTGCATGTGTGTTTGCAGGA +
Preference number: 3 (lower is better)
Translates to: GIPGGCQQIRDG*CLCVCACVFAG
Trigger: TCCTGCAAACACACATGCACACACACAGAGACATCAACCATCTCTAATTTGTTGGCACCCACCAGGGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CAA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTGAAGGGCATAGGGTGTaGACCTTTGGCTGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPEGHRV*TFGCLS
Trigger: GGAGAGACAGCCAAAGGTCAACACCCTATGCCCTTC...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CCA 72 bp GGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTaGCAGGCATTGTCAGACACTGAGGAACAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: GVPFNHIHQCPS*QALSDTEEQRN
Trigger: ATTTCTTTGTTCCTCAGTGTCTGACAATGCCTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CAA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTTATGGAAGCATCCTTTaGAAAGCCAGAGTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPYGSIL*KARVQG
Trigger: CCCCTGCACTCTGGCTTTCAAAAGGATGCTTCCATA...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR-3UTR CAA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTATACATGTTCCTATGTaGTTACACCAGATGCTAACA +
Preference number: 3 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTIHVPM*LHQMLT
Trigger: TGTTAGCATCTGGTGTAACAACATAGGAACATGTAT...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 72 bp GGCTCCTCTCTCACTCACCACCACAGTATAAATTGCTaGCTTAATGAGTTCTCATGTTCCCACATCAAAGGA +
Preference number: 3 (lower is better)
Translates to: GSSLTHHHSINC*LNEFSCSHIKG
Trigger: TCCTTTGATGTGGGAACATGAGAACTCATTAAGGCAGCAATTTATACTGTGGTGGTGAGTGAGAGAGGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 72 bp CAGTCTTCTGTACACAAACTACAAGGGAGGGTTTCATaGAACCAGTTGTTACAAAAGCCTGGGGTTGATGGA +
Preference number: 3 (lower is better)
Translates to: QSSVHKLQGRVS*NQLLQKPGVDG
Trigger: TCCATCAACCCCAGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR TCA 72 bp TGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATaGCTTCAATTCATTGCAGTCTTCTGTACACAAACT +
Preference number: 3 (lower is better)
Translates to: CWWLSGSWLYVS*LQFIAVFCTQT
Trigger: AGTTTGTGTACAGAAGACTGCAATGAATTGAAGTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR GCA 72 bp AGATGGTTGATGTCTCTGTGTGTGTGCATGTGTGTTTaGAGGATCAGAGGGTTCTCTGACTTAGTTTTGAAA +
Preference number: 3 (lower is better)
Translates to: RWLMSLCVCMCV*RIRGFSDLVLK
Trigger: TTTCAAAACTAAGTCAGAGAACCCTCTGATCCTGCAAACACACATGCACACACACAGAGACATCAACCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCTCGAGGGGGCGCTCATaGCCAGGGGTGCCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAASRGRS*PGVPAQ
Trigger: CTGCGCCGGCACCCCTGGTCATGAGCGCCCCCTCGA...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp GCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGGTGGCCACGCAGAGGGCACGCTCAGCATaGAGAGCTCGTCGGCTACGG +
Preference number: 4 (lower is better)
Translates to: AVFGAVGMVPTPWEVATQRARSA*RARRLR
Trigger: CCGTAGCCGACGAGCTCTTCATGCTGAGCGTGCCCT...CTGCGTGGCCACCTCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGGTGGCCACGCAGGTAGACCACGAAGACTaGCGACCAGGCCGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: AVFGAVGMVPTPWEVATQVDHED*RPGRVW
Trigger: CCACACCCGGCCTGGTCGGCAGTCTTCGTGGTCTAC...CTGCGTGGCCACCTCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGGTGGCCACGCAGAGCCCTGGGGACCACTaGCAGTGCTGTGAACCCCTC +
Preference number: 4 (lower is better)
Translates to: AVFGAVGMVPTPWEVATQSPGDH*QCCEPL
Trigger: GAGGGGTTCACAGCACTGGCAGTGGTCCCCAGGGCT...CTGCGTGGCCACCTCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACTTGCAGGCCACGGCCTaGCCGCCGCGAGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHLQATA*PPRAGL
Trigger: CAGACCGGCTCGCGGCGGCCAGGCCGTGGCCTGCAA...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp GCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGGTGGCCACGCAGCCCAGAGGTAGTCTCTaGATGCTAAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AVFGAVGMVPTPWEVATQPRGSL*MLSQVG
Trigger: CCCCACCTGGCTTAGCATTCAGAGACTACCTCTGGG...CTGCGTGGCCACCTCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp GCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGGTGGCCACGCAGCCGCCACCACCTGCATaGCTTATGACTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AVFGAVGMVPTPWEVATQPPPPA*LMTAGS
Trigger: TGACCCTGCAGTCATAAGTCATGCAGGTGGTGGCGG...CTGCGTGGCCACCTCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GCATTCAGGAGATGCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGACGACCAGGCCGGGTGTaGCCACTGCAGGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AFRRCSLRGCRNGAHPLGRPGRV*PLQVAG
Trigger: GCCTGCAACCTGCAGTGGCCACACCCGGCCTGGTCG...TCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGCATCTCCTGAATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GCTGCTCTCTGGTCAGCTTTTCCCGCCCATGGCTCCTCTCTCACTCACCACCACATGGTGCCCACCCCTTaGGAGGTGGCCACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AALWSAFPAHGSSLTHHHMVPTP*EVATQG
Trigger: ACCCTGCGTGGCCACCTCCCAAGGGGTGGGCACCAT...GTGGTGGTGAGTGAGAGAGGAGCCATGGGCGGGAAAAGCTGACCAGAGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGTCCGAGCGCCTGCGCTaGTGCCAGCCAGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQSERLR*CQPARR
Trigger: CCTGCGCGCTGGCTGGCAGCAGCGCAGGCGCTCGGA...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGGTGGCCACGCAGCCTCTATCCAAAACCTaGGCTGGTTCCCATCCCTCG +
Preference number: 4 (lower is better)
Translates to: AVFGAVGMVPTPWEVATQPLSKT*AGSHPS
Trigger: CGAGGGATGGGAACCAGCCCAGGTTTTGGATAGAGG...CTGCGTGGCCACCTCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGGCCGGGTGTGGCCACTaGAGGTTGCAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQAGCGH*RLQATA
Trigger: GGCCGTGGCCTGCAACCTGCAGTGGCCACACCCGGC...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCGCTGGGAAGAAGCCCTaGGGACCACTGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAAAGKKP*GPLPVL
Trigger: CAGCACTGGCAGTGGTCCCCAGGGCTTCTTCCCAGC...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGCCGCCGGAGCGCTACTaGCATTGGCTGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQPPERY*HWLQRA
Trigger: GGCCCTCTGCAGCCAATGCCAGTAGCGCTCCGGCGG...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp GAAGGAGGACTAAGCAGAGAAGCGTGCTATCTCCTGCCCTCCCACCATTTGATTTCTTCCCGGCTACGCTaGAGAGCTGCGGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: EGGLSREACYLLPSHHLISSRLR*RAAGTG
Trigger: CCCGGTGCCCGCAGCTCTTCAGCGTAGCCGGGAAGA...AATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACGTGGCCACTGCAGGTTaGAGGCCACGGCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDVATAG*RPRPGR
Trigger: GCGGCCAGGCCGTGGCCTGCAACCTGCAGTGGCCAC...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCAAGGGCATAGGGTGTTaGCCTTTGGCTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAAKGIGC*PLAVSP
Trigger: GGGAGAGACAGCCAAAGGTCAACACCCTATGCCCTT...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp CCAAGTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCGCTACGCTGAAGAGCTaGGGGCACCGGGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PSSYGYTRPTDMETDFRCATLKS*GHRGAP
Trigger: GGGCGCTCCCCGGTGCCCGCAGCTCTTCAGCGTAGC...GCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTGCTACTGGCATTGGCTaGAGAGGGCCAGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTATGIG*RGPGRP
Trigger: GGGACGGCCTGGCCCTCTGCAGCCAATGCCAGTAGC...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp CTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAAACTCCGGCCGGGTTCTGGTTaGAGGGCTTCCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LHGVSANAEFTAGKSSKLRPGSG*RASCWQ
Trigger: CTGCCAGCAGGAAGCCCTGCAACCAGAACCCGGCCG...GAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACTGCAGAGAGGAAGGGTaGTACCTCCCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHCREEG*YLPPPS
Trigger: AGAAGGTGGAGGGAGGTAGCACCCTTCCTCTCTGCA...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCCTCCTGTACAAGCTGTaGTCCCACCACAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAALLYKL*SHHKAE
Trigger: CTCTGCCTTGTGGTGGGAGCACAGCTTGTACAGGAG...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCCGGTGGCATCAAGGCTaGTCACGAAGAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAARWHQG*SRRGSA
Trigger: TGCTGAACCTCTTCGTGACCAGCCTTGATGCCACCG...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAACCACCCCTTGGGAGGTaGCCACGCAGGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMEPPLGR*PRRVGR
Trigger: CCTACCCACCCTGCGTGGCCACCTCCCAAGGGGTGG...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp AGCGTGCTATCTCCTGCCCTCCCACCATTTGATTCGCGTGTCTCCACGGTGTCTTCTCCGGCAGGTACATaGGCTGCTGGAAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: SVLSPALPPFDSRVSTVSSPAGT*AAGRNR
Trigger: CCTGTTCCTTCCAGCAGCCCATGTACCTGCCGGAGA...AGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GCATTCAGGAGATGCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAATCCAAAACCTGGGCTaGTTCCCATCCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AFRRCSLRGCRNGAHPLGIQNLG*FPSLAA
Trigger: AGCAGCGAGGGATGGGAACCAGCCCAGGTTTTGGAT...TCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGCATCTCCTGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp GTCTGTGAGGCTGACCACTCTGAAGGGCATAGGGTGTaGACCTTTGGCTGTCTCTCCCCCTCCCCACACCAT +
Preference number: 4 (lower is better)
Translates to: VCEADHSEGHRV*TFGCLSPSPHH
Trigger: ATGGTGTGGGGAGGGGGAGAGACAGCCAAAGGTCAACACCCTATGCCCTTCAGAGTGGTCAGCCTCACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCCCCATACCACCAGAATaGTCATCCAGAATCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAAPIPPE*SSRIRP
Trigger: CGGCCTGATTCTGGATGATCATTCTGGTGGTATGGG...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp AGCGTGCTATCTCCTGCCCTCCCACCATTTGATTCGCGTGTCTCCACGGTGTCTAGCCTCCCAGGCAGGTaGCATATGTTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SVLSPALPPFDSRVSTVSSLPGR*HMLVAF
Trigger: GAAAGCCACCAACATATGTCACCTGCCTGGGAGGCT...AGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp ACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATGAAAAGGCCCTGAAGCTACCGACAAGTGCTCAGTaGACCTCGTTGCTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TSAQCTSLLPGNEKALKLPTSAQ*TSLLPG
Trigger: TCCCGGCAGCAACGAGGTGCACTGAGCACTTGTCGG...TAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGGCATTGCTTGCGGCCGGGTTCTaGTTGCAGGGCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLGVPFNHIHQCPSWQALLAAGF*LQGFLL
Trigger: CAGCAGGAAGCCCTGCAACCAGAACCCGGCCGCAAG...CAATGCCTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACCGAGACCCACAGACATaGAGACTGACTTCAGATGCC +
Preference number: 4 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHRDPQT*RLTSDA
Trigger: GGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCG...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp CTGCAGAGAGGAAGGGTGCTACCTCCCTCCACCTTCTaGAGTCCTCTCCCAAGCAGTGGCTGTAAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LQRGRVLPPSTF*SPLPSSGCKES
Trigger: TGACTCCTTACAGCCACTGCTTGGGAGAGGACTCAAGAAGGTGGAGGGAGGTAGCACCCTTCCTCTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp AGCAGAGAAGCGTGCTATCTCCTGCCCTCCCACCATTaGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: SREACYLLPSHH*IRVSPRCLCQC
Trigger: GCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GAAGGAGGACTAAGCAGAGAAGCGTGCTATCTCCTGCCCTCCCACCATTTGATTAGCCGGTCTGGTGTCTaGGAAGATGGCGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: EGGLSREACYLLPSHHLISRSGV*EDGDGE
Trigger: CTCCCCATCGCCATCTTCGCAGACACCAGACCGGCT...AATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp CCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGGGGGCACATGCACCCTaGCCCACCTTTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PPFDSRVSTVSLPMQSLQGAHAP*PTFALE
Trigger: CTCAAGAGCAAAGGTGGGGCAGGGTGCATGTGCCCC...CTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACTCTCCACGGTGTCTCTaGCAATGCAGAGTTTACAGC +
Preference number: 4 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHSPRCL*QCRVYS
Trigger: GCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGA...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGCACCCCGCCACCACCTaGATGACTTATGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQHPATT*MTYDCR
Trigger: CCTGCAGTCATAAGTCATGCAGGTGGTGGCGGGGTG...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAAGAGCGCTACTGGCATTaGCTGCAGAGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQERYWH*LQRARP
Trigger: CGGCCTGGCCCTCTGCAGCCAATGCCAGTAGCGCTC...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCGGTGACATATGTTGGTaGCTTTCAGGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAAGDICW*LSGSWL
Trigger: CAGCCAGGATCCTGAAAGCCACCAACATATGTCACC...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp CCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTaGCTGCCGGGAAATGAAAAGGCCCTGAAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: PNTAPTSAQCTS*LPGNEKALKLK
Trigger: CTTTAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TCTCTGAATGCTAAGCCAGGTGGGGTCCCCCAAACTTCATACATGTTCCTATGTTGGCGATGGGGAGAGTaGCCAACAGGGATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLNAKPGGVPQTSYMFLCWRWGE*PTGMPA
Trigger: GGCTGGCATCCCTGTTGGTCACTCTCCCCATCGCCA...ACATAGGAACATGTATGAAGTTTGGGGGACCCCACCTGGCTTAGCATTCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp CCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCCACTGCCAGTGCTGTaGACCCCTCACCTCACTACT +
Preference number: 4 (lower is better)
Translates to: PPFDSRVSTVSLPMQSLQPLPVL*TPHLTT
Trigger: AGTAGTGAGGTGAGGGGTTCACAGCACTGGCAGTGG...CTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGGTTCCCATCCCTCGCTaGTCTCTGGTCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQVPIPR*SLVSFS
Trigger: GGAAAAGCTGACCAGAGAGCAGCGAGGGATGGGAAC...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCGTGTGCATGTGTGTTTaGAGGATCAGAGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAAVCMCV*RIRGFS
Trigger: AGAGAACCCTCTGATCCTGCAAACACACATGCACAC...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GCATTCAGGAGATGCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGGTATCCCTGGTGGGTaGCAACAAATTAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: AFRRCSLRGCRNGAHPLGGIPGG*QQIRDG
Trigger: ACCATCTCTAATTTGTTGGCACCCACCAGGGATACC...TCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGCATCTCCTGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGAGTGCACCTCGTTGCTaGCGGGAAATGAAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQSAPRC*REMKRP
Trigger: GGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACT...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GAAGGAGGACTAAGCAGAGAAGCGTGCTATCTCCTGCCCTCCCACCATTTGATTTCCCTCGCTGCTCTCTaGTCAGCTTTTCCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: EGGLSREACYLLPSHHLISLAAL*SAFPAH
Trigger: ATGGGCGGGAAAAGCTGACCAGAGAGCAGCGAGGGA...AATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp CTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAAACTCGCAGCAGAAGAGTTCTaGCACTCTCCGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: LHGVSANAEFTAGKSSKLAAEEF*HSPAGT
Trigger: TGTACCTGCCGGAGAGTGTCAGAACTCTTCTGCTGC...GAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp GAAGGAGGACTAAGCAGAGAAGCGTGCTATCTCCTGCCCTCCCACCATTTGATTCACCTGCATGACTTATaGCTGCAGGGTCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EGGLSREACYLLPSHHLIHLHDL*LQGQGQ
Trigger: CTGCCCTTGACCCTGCAGTCATAAGTCATGCAGGTG...AATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp CCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGACAAGGCAGAGCGTCTaGAGAGAGGAAGGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: PPFDSRVSTVSLPMQSLQTRQSV*REEGCY
Trigger: GTAGCACCCTTCCTCTCTGCAGACGCTCTGCCTTGT...CTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTCTAAGCAGAGAAGCGTaGTATCTCCTGCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTLSREA*YLLPSH
Trigger: GTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAG...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACCACAGCCCCGACAAGTaGTCAGTGCACCTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDHSPDK*SVHLVA
Trigger: AGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTG...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTCTGCTGGCAGGGGAGTaGGGGGCACATGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPLLAGE*GAHAPC
Trigger: GCAGGGTGCATGTGCCCCCCACTCCCCTGCCAGCAG...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAAACCCCACGTACAAGCTaGGAAGAAGCCCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQTPRTS*EEALGT
Trigger: GGTCCCCAGGGCTTCTTCCCAGCTTGTACGTGGGGT...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp AGCGTGCTATCTCCTGCCCTCCCACCATTTGATTCGCGTGTCTCCACGGTGTCTAACTCGAACCTCCCTTaGCACATATTCCAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SVLSPALPPFDSRVSTVSNSNLP*HIFQVG
Trigger: TCCCACTTGGAATATGTGCCAAGGGAGGTTCGAGTT...AGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAACTCCCTCCACCTTCTTaGGTCCTCTCCCAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQLPPPS*VLSQAV
Trigger: CACTGCTTGGGAGAGGACTCAAGAAGGTGGAGGGAG...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp GCATTCAGGAGATGCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGATGGCTGTATGTCTCATaGCTTCAATTCATTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AFRRCSLRGCRNGAHPLGWLYVS*LQFIAV
Trigger: GACTGCAATGAATTGAAGTCATGAGACATACAGCCA...TCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGCATCTCCTGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCACTGACCTGGTTTTATaGCTTGCAATAAACCCCATG +
Preference number: 4 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAATDLVL*LAINPM
Trigger: CATGGGGTTTATTGCAAGGCATAAAACCAGGTCAGT...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGGAGGCTGAGGTGTCCTaGCTCTCAGAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQEAEVS*LSETFL
Trigger: AAGAAAAGTCTCTGAGAGGCAGGACACCTCAGCCTC...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAAAGCTTTTCCCGCCCATaGCTCCTCTCTCACTCACCA +
Preference number: 4 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMESFSRP*LLSHSP
Trigger: TGGTGAGTGAGAGAGGAGCCATGGGCGGGAAAAGCT...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGGCATTGCCCATTCTCTCAGAGTaGTCTGTGAGGCTGACCACT +
Preference number: 4 (lower is better)
Translates to: VLGVPFNHIHQCPSWQALPILSE*SVRLTT
Trigger: AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGG...CAATGCCTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAAGTGGTGGAGCTTAGGTaGGCATTCAGGAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMEVVELR*AFRRCS
Trigger: ACTGCATCTCCTGAATGCTCACCTAAGCTCCACCAC...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTATGGAAGCATCCTTTTaGAAGCCAGAGTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTMEASF*KPECRG
Trigger: TCCCCTGCACTCTGGCTTTCAAAAGGATGCTTCCAT...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp CCAAGTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCGCAGGCAGAACAAGATaGCCATCGAAGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSSYGYTRPTDMETDFRCAGRTR*PSKQAS
Trigger: GGAGGCTTGCTTCGATGGTCATCTTGTTCTGCCTGC...GCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGGCATTGGTAGGTGCCCTGTCTTaGTTATCAGAGAGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: VLGVPFNHIHQCPSWQALVGALS*LSESLP
Trigger: GGGCAAACTCTCTGATAAGCAAGACAGGGCACCTAC...CAATGCCTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp CTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAAACTCCGGTGTCTCTGCCAATaGAGAGTTTACAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LHGVSANAEFTAGKSSKLRCLCQ*RVYSWE
Trigger: TTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCG...GAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAACTCAGTGCACCTCGTTaGTGCCGGGAAATGAAAAGG +
Preference number: 4 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMELSAPR*CREMKR
Trigger: CCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAG...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAAAGGCAGAGAACCCGCTaGAAGAATCGGCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQRQRTR*KNRRKL
Trigger: CAACTTCCGCCGATTCTTCCAGCGGGTTCTCTGCCT...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTTCACTACTATCAACCTaGGTGGTCCTTGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTSLLST*VVLGVP
Trigger: CGGAACTCCAAGGACCACCCAGGTTGATAGTAGTGA...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAACACAGACATGGAGACTaGCTTCAGATGCCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMEHRHGD*LQMPKV
Trigger: TACCTTGGGCATCTGAAGTCAGTCTCCATGTCTGTG...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAAGCCCAGTCTGATCACTaGGAGACTAAAGAAAGGACC +
Preference number: 4 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMEAQSDH*ETKERT
Trigger: GGTCCTTTCTTTAGTCTCTCAGTGATCAGACTGGGC...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACTTTCTCACCACCTCCTaGTTCCCAGCCCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDFLTTS*FPALEE
Trigger: TTCTTCAAGGGCTGGGAAGCAGGAGGTGGTGAGAAA...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TCTCTGAATGCTAAGCCAGGTGGGGTCCCCCAAACTTCATACATGTTCCTATGTTACTCACAGGAAGACTaGTCCCAGCTCAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: SLNAKPGGVPQTSYMFLCYSQED*SQLRAT
Trigger: AGTTGCCCTGAGCTGGGAGCAGTCTTCCTGTGAGTA...ACATAGGAACATGTATGAAGTTTGGGGGACCCCACCTGGCTTAGCATTCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAAGAGACTGACTTCAGATaGCCAAGGTATCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQETDFR*PRYPWW
Trigger: CCACCAGGGATACCTTGGGCATCTGAAGTCAGTCTC...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACGGAAGGAACAGGTGGTaGAGCTTAGGTGAGCATTCA +
Preference number: 4 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDGRNRW*SLGEHS
Trigger: TGAATGCTCACCTAAGCTCCACCACCTGTTCCTTCC...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TCTCTGAATGCTAAGCCAGGTGGGGTCCCCCAAACTTCATACATGTTCCTATGTGCTGGAAGGAACAGGTaGTGGAGCTTAGGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: SLNAKPGGVPQTSYMFLCAGRNR*WSLGEH
Trigger: ATGCTCACCTAAGCTCCACCACCTGTTCCTTCCAGC...ACATAGGAACATGTATGAAGTTTGGGGGACCCCACCTGGCTTAGCATTCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp CCAAGTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCATCAGTGCCCATCCTaGCAGGCATTGTCAGACACT +
Preference number: 4 (lower is better)
Translates to: PSSYGYTRPTDMETDFRCHQCPS*QALSDT
Trigger: AGTGTCTGACAATGCCTGCCAGGATGGGCACTGATG...GCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp CCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGTACTATCAACCTGGGTaGTCCTTGGAGTTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: PPFDSRVSTVSLPMQSLQYYQPG*SLEFRS
Trigger: TGAACGGAACTCCAAGGACCACCCAGGTTGATAGTA...CTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp AACCCCTCACCTCACTACTATCAACCTGGGTGGTCCTaGGAGTTCCGTTCAACCATATTCATCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: NPSPHYYQPGWS*EFRSTIFISAH
Trigger: ATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCAGGTTGATAGTAGTGAGGTGAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp TTATTCCATGCTAATCTGGGCAGCCACACACTAGTGTaGCCAAGACTCCTGGTAGGTGCCCTGTCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LFHANLGSHTLV*PRLLVGALSCL
Trigger: TAAGCAAGACAGGGCACCTACCAGGAGTCTTGGCAACACTAGTGTGTGGCTGCCCAGATTAGCATGGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTGGCAGGTACATGGGCTaGTGGAAGGAACAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPGRYMG*WKEQVV
Trigger: CACCACCTGTTCCTTCCAGCAGCCCATGTACCTGCC...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAATGCATGACTTATGACTaGAGGGTCAAGGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMECMTYD*RVKGSV
Trigger: AACACTGCCCTTGACCCTGCAGTCATAAGTCATGCA...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp GAAGGAGGACTAAGCAGAGAAGCGTGCTATCTCCTGCCCTCCCACCATTTGATTGGAGTCCTACCCATATaGAAGCATCCTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: EGGLSREACYLLPSHHLIGVLPI*KHPFES
Trigger: GCTTTCAAAAGGATGCTTCCATATGGGTAGGACTCC...AATCAAATGGTGGGAGGGCAGGAGATAGCACGCTTCTCTGCTTAGTCCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp CTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAAACTCTGCAGAGTTTACAGCTaGGAAGAGCTCAAAACTCGA +
Preference number: 4 (lower is better)
Translates to: LHGVSANAEFTAGKSSKLCRVYS*EELKTR
Trigger: TCGAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCA...GAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp CTCCTGGTAGGTGCCCTGTCTTGCTTATCAGAGAGTTaGCCCAGTCTGATCACTGAGAGACTAAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LLVGALSCLSES*PSLITERLKKG
Trigger: TCCTTTCTTTAGTCTCTCAGTGATCAGACTGGGCAAACTCTCTGATAAGCAAGACAGGGCACCTACCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp GGGTTTCATGCAACCAGTTGTTACAAAAGCCTGGGGTaGATGGAACTAAAGCTGGTAGCACTGTTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GFHATSCYKSLG*MELKLVALLMG
Trigger: GCCCATCAACAGTGCTACCAGCTTTAGTTCCATCAACCCCAGGCTTTTGTAACAACTGGTTGCATGAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp CTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAAACTCCTGCTTTGTTATTACTaGCCTGGTTTTATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LHGVSANAEFTAGKSSKLLLCYY*PGFMPC
Trigger: GCAAGGCATAAAACCAGGTCAGTAATAACAAAGCAG...GAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp CCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGTTCCAAGTGGGAAACTaGGGCTTAGAGAGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: PPFDSRVSTVSLPMQSLQFQVGN*GLERLN
Trigger: ATTTAACCTCTCTAAGCCTCAGTTTCCCACTTGGAA...CTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp CCAAGTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCAACCATATTCATCAGTaGCCATCCTGGCAGGCATTG +
Preference number: 4 (lower is better)
Translates to: PSSYGYTRPTDMETDFRCNHIHQ*PSWQAL
Trigger: CAATGCCTGCCAGGATGGGCACTGATGAATATGGTT...GCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp CTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAAACTCCAAGGGAGGGTTTCATaGAACCAGTTGTTACAAAAG +
Preference number: 4 (lower is better)
Translates to: LHGVSANAEFTAGKSSKLQGRVS*NQLLQK
Trigger: CTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTG...GAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTAGGTACATGGGCTGCTaGAAGGAACAGGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPRYMGC*KEQVVE
Trigger: CTCCACCACCTGTTCCTTCCAGCAGCCCATGTACCT...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTAGGATAAGGGACACGTaGTTGACGGTGGCATCAAGG +
Preference number: 4 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPRIRDT*LTVASR
Trigger: CCTTGATGCCACCGTCAACCACGTGTCCCTTATCCT...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TCTCTGAATGCTAAGCCAGGTGGGGTCCCCCAAACTTCATACATGTTCCTATGTGATCAGAGGGTTCTCTaGCTTAGTTTTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: SLNAKPGGVPQTSYMFLCDQRVL*LSFETS
Trigger: GGAAGTTTCAAAACTAAGTCAGAGAACCCTCTGATC...ACATAGGAACATGTATGAAGTTTGGGGGACCCCACCTGGCTTAGCATTCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR TCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTGTTGCTGCCGGGAAATaGAAAGGCCCTGAAGCTAAA +
Preference number: 4 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPVAAGK*KGPEAK
Trigger: TTTAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAAC...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp CCAAGTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCTGGTTTTATGCCTTaGAATAAACCCCATGTCATG +
Preference number: 4 (lower is better)
Translates to: PSSYGYTRPTDMETDFRCPGFMP*NKPHVM
Trigger: CATGACATGGGGTTTATTGCAAGGCATAAAACCAGG...GCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp ACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATGAAAAGGCCCTGAAGCTAATGACTTCAATTCATTaGAGTCTTCTGTACACAAAC +
Preference number: 4 (lower is better)
Translates to: TSAQCTSLLPGNEKALKLMTSIH*SLLYTN
Trigger: GTTTGTGTACAGAAGACTGCAATGAATTGAAGTCAT...TAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTGCAGGTGACATATGTTaGTGGCTTTCAGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPAGDIC*WLSGSW
Trigger: CCAGGATCCTGAAAGCCACCAACATATGTCACCTGC...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR GCA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTCACAGTATAAATTGCTaGCTTAATGAGTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTHSINC*LNEFSC
Trigger: ACATGAGAACTCATTAAGGCAGCAATTTATACTGTG...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CCA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTAACCTGGGTGGTCCTTaGAGTTCCGTTCAACCATAT +
Preference number: 4 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPNLGGP*SSVQPY
Trigger: ATATGGTTGAACGGAACTCCAAGGACCACCCAGGTT...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
3UTR CAA 72 bp TTAAGCTCTTTCCCTTTGGGAAAGATAATTTATCCTTaGGTTAACACATCAGGCAACAAAGATACGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSSFPLGKIIYP*VNTSGNKDTAF
Trigger: AAAGGCCGTATCTTTGTTGCCTGATGTGTTAACCAAAGGATAAATTATCTTTCCCAAAGGGAAAGAGCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS CCA 90 bp GCCGACCAGGCCGGGTGTGGCCACTGCAGGTTGCAGGCCACGGCCTaGCCGCCGCGAGCCGGTCTGGTGTCTGCGAAGATGGCGATGGGG +
Preference number: 5 (lower is better)
Translates to: ADQAGCGHCRLQATA*PPRAGLVSAKMAMG
Trigger: CCCCATCGCCATCTTCGCAGACACCAGACCGGCTCGCGGCGGCCAGGCCGTGGCCTGCAACCTGCAGTGGCCACACCCGGCCTGGTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS GCA 90 bp CAGGTTGCAGGCCACGGCCTGGCCGCCGCGAGCCGGTCTGGTGTCTaGGAAGATGGCGATGGGGAGAGTGACCAACAGGGATGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: QVAGHGLAAASRSGV*EDGDGESDQQGCQP
Trigger: TGGCTGGCATCCCTGTTGGTCACTCTCCCCATCGCCATCTTCGCAGACACCAGACCGGCTCGCGGCGGCCAGGCCGTGGCCTGCAACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS GCA 90 bp ATCAGCACCAGCCTGGTGATTTTCTTCTCCGAGCGCCTGCGCTGCTaGCAGCCAGCGCGCAGGGCCACGGCGCGCATCTTGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: ISTSLVIFFSERLRC*QPARRATARILPTM
Trigger: CATCGTGGGCAAGATGCGCGCCGTGGCCCTGCGCGCTGGCTGGCAGCAGCGCAGGCGCTCGGAGAAGAAAATCACCAGGCTGGTGCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp GCATTCAGGAGATGCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGTGAGGGGGATGCGCTaGCGGCCGGGTTCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: AFRRCSLRGCRNGAHPLGVRGMR*RPGSGC
Trigger: GCAACCAGAACCCGGCCGCAAGCGCATCCCCCTCAC...TCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGCATCTCCTGAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCAAGATGACCAGGGCGTaGCCCACCAGCCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAAKMTRA*PTSPTR
Trigger: CCTGGTGGGGCTGGTGGGCAACGCCCTGGTCATCTT...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGCCCAGGTTGATGAGCTaGGCCACGCTGGGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQPRLMS*ATLGRR
Trigger: CCGGCGGCCCAGCGTGGCCAAGCTCATCAACCTGGG...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp AGCGTGCTATCTCCTGCCCTCCCACCATTTGATTCGCGTGTCTCCACGGTGTCTCTGCCCTCCCACCATTaGATTCGCGTGTCTCCACGG +
Preference number: 5 (lower is better)
Translates to: SVLSPALPPFDSRVSTVSLPSHH*IRVSPR
Trigger: CCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAG...AGACACCGTGGAGACACGCGAATCAAATGGTGGGAGGGCAGGAGATAGCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACGCGGCCGGGTTCTGGTaGCAGGGCTTCCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDAAGFW*QGFLLA
Trigger: TGCCAGCAGGAAGCCCTGCAACCAGAACCCGGCCGC...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp TTGATGGGCTCCAAACACAGCCCCGACAAGTGCTCAGTGCACCTCGTTGCTGCCGCTCAGTGCACCTCGTaGCTGCCGGGAAATGAAAAG +
Preference number: 5 (lower is better)
Translates to: LMGSKHSPDKCSVHLVAAAQCTS*LPGNEK
Trigger: CTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGC...GGCAGCAACGAGGTGCACTGAGCACTTGTCGGGGCTGTGTTTGGAGCCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp GCAGTCTTCGGGGCTGTAGGAATGGTGCCCACCCCTTGGGAGGTGGCCACGCAGTACAAAAGCCTGGGGTaGATGGAACTAAAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: AVFGAVGMVPTPWEVATQYKSLG*MELKLV
Trigger: TACCAGCTTTAGTTCCATCAACCCCAGGCTTTTGTA...CTGCGTGGCCACCTCCCAAGGGGTGGGCACCATTCCTACAGCCCCGAAGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp CTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAAACTCCACCCTGCCCCACCTTaGCTCTTGAGAGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LHGVSANAEFTAGKSSKLHPAPP*LLRAVA
Trigger: TGCCACTGCTCTCAAGAGCAAAGGTGGGGCAGGGTG...GAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp TGGGTGGTCCTTGGAGTTCCGTTCAACCATATTCATCAGTGCCCATCCTGGCAGCCTGCTTCCCAGCCCTaGAAGAACAGCCAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: WVVLGVPFNHIHQCPSWQPASQP*KNSQRF
Trigger: GAACCTCTGGCTGTTCTTCAAGGGCTGGGAAGCAGG...CTGCCAGGATGGGCACTGATGAATATGGTTGAACGGAACTCCAAGGACCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp ACAAGTGCTCAGTGCACCTCGTTGCTGCCGGGAAATGAAAAGGCCCTGAAGCTAGAAGGGCATAGGGTGTaGACCTTTGGCTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: TSAQCTSLLPGNEKALKLEGHRV*TFGCLS
Trigger: GGAGAGACAGCCAAAGGTCAACACCCTATGCCCTTC...TAGCTTCAGGGCCTTTTCATTTCCCGGCAGCAACGAGGTGCACTGAGCACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTATAAGGGACACGTGGTaGACGGTGGCATCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTIRDTW*TVASRL
Trigger: CAGCCTTGATGCCACCGTCAACCACGTGTCCCTTAT...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp TCTGTACACAAACTACAAGGGAGGGTTTCATGCAACCAGTTGTTACAAAAGCCTAATGGTGCCCACCCCTaGGGAGGTGGCCACGCAGGG +
Preference number: 5 (lower is better)
Translates to: SVHKLQGRVSCNQLLQKPNGAHP*GGGHAG
Trigger: CCCTGCGTGGCCACCTCCCAAGGGGTGGGCACCATT...AGGCTTTTGTAACAACTGGTTGCATGAAACCCTCCCTTGTAGTTTGTGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp AAGGCCCTGAAGCTAAAGAAGAGAGCAGCGGGTAGGCTCACCCTACACCCCCACGTTTCATGCAACCAGTaGTTACAAAAGCCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: KALKLKKRAAGRLTLHPHVSCNQ*LQKPGV
Trigger: AACCCCAGGCTTTTGTAACAACTGGTTGCATGAAAC...GTGGGGGTGTAGGGTGAGCCTACCCGCTGCTCTCTTCTTTAGCTTCAGGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTCCATCCTGGCAGGCATaGTCAGACACTGAGGAACAA +
Preference number: 5 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTPSWQA*SDTEEQ
Trigger: TTGTTCCTCAGTGTCTGACAATGCCTGCCAGGATGG...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp CTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGAAGAGCTCAAAACTCCAACCTGGGTGGTCCTaGGAGTTCCGTTCAACCATA +
Preference number: 5 (lower is better)
Translates to: LHGVSANAEFTAGKSSKLQPGWS*EFRSTI
Trigger: TATGGTTGAACGGAACTCCAAGGACCACCCAGGTTG...GAGTTTTGAGCTCTTCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp GTAGTACAGACATGGCTACCCATTCTCTCAGAGTGGTCTGTGAGGCTGACCACTGGTAGGTGCCCTGTCTaGCTTATCAGAGAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: VVQTWLPILSEWSVRLTTGRCPV*LIREFA
Trigger: GGCAAACTCTCTGATAAGCAAGACAGGGCACCTACC...AGTGGTCAGCCTCACAGACCACTCTGAGAGAATGGGTAGCCATGTCTGTACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp TTTGATTCGCGTGTCTCCACGGTGTCTCTGCCAATGCAGAGTTTACAGCTGGGATATGGAAGCATCCTTTaGAAAGCCAGAGTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: FDSRVSTVSLPMQSLQLGYGSIL*KARVQG
Trigger: CCCCTGCACTCTGGCTTTCAAAAGGATGCTTCCATA...TCCCAGCTGTAAACTCTGCATTGGCAGAGACACCGTGGAGACACGCGAATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp AGGCAGGTGACATATGTTGGTGGCTTTCAGGATCCTGGCTGTATGTCTCATGACAAGCTGGTAGCACTGTaGATGGGCTCCAAACACAGC +
Preference number: 5 (lower is better)
Translates to: RQVTYVGGFQDPGCMSHDKLVAL*MGSKHS
Trigger: GCTGTGTTTGGAGCCCATCAACAGTGCTACCAGCTT...GTCATGAGACATACAGCCAGGATCCTGAAAGCCACCAACATATGTCACCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp TATGACTGCAGGGTCAAGGGCAGTGTTCACGCTCATTTTCCAGTGGTGATGGAATGCTTATCAGAGAGTTaGCCCAGTCTGATCACTGAG +
Preference number: 5 (lower is better)
Translates to: YDCRVKGSVHAHFPVVMECLSES*PSLITE
Trigger: CTCAGTGATCAGACTGGGCAAACTCTCTGATAAGCA...TTCCATCACCACTGGAAAATGAGCGTGAACACTGCCCTTGACCCTGCAGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp GTAGTTATGGTTACACGAGACCCACAGACATGGAGACTGACTTCAGATGCCCAAAAACTCGAACCTCCCTaGGCACATATTCCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: VVMVTRDPQTWRLTSDAQKLEPP*AHIPSG
Trigger: CCCACTTGGAATATGTGCCAAGGGAGGTTCGAGTTT...TTGGGCATCTGAAGTCAGTCTCCATGTCTGTGGGTCTCGTGTAACCATAACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS-3UTR CAA 90 bp TCTCTGAATGCTAAGCCAGGTGGGGTCCCCCAAACTTCATACATGTTCCTATGTATACATGTTCCTATGTaGTTACACCAGATGCTAACA +
Preference number: 5 (lower is better)
Translates to: SLNAKPGGVPQTSYMFLCIHVPM*LHQMLT
Trigger: TGTTAGCATCTGGTGTAACAACATAGGAACATGTAT...ACATAGGAACATGTATGAAGTTTGGGGGACCCCACCTGGCTTAGCATTCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS CCA 72 bp GCCGGGTGTGGCCACTGCAGGTTGCAGGCCACGGCCTaGCCGCCGCGAGCCGGTCTGGTGTCTGCGAAGATG +
Preference number: 6 (lower is better)
Translates to: AGCGHCRLQATA*PPRAGLVSAKM
Trigger: CATCTTCGCAGACACCAGACCGGCTCGCGGCGGCCAGGCCGTGGCCTGCAACCTGCAGTGGCCACACCCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS GCA 72 bp GGCCACGGCCTGGCCGCCGCGAGCCGGTCTGGTGTCTaGGAAGATGGCGATGGGGAGAGTGACCAACAGGGA +
Preference number: 6 (lower is better)
Translates to: GHGLAAASRSGV*EDGDGESDQQG
Trigger: TCCCTGTTGGTCACTCTCCCCATCGCCATCTTCGCAGACACCAGACCGGCTCGCGGCGGCCAGGCCGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255008.5
CDS GCA 72 bp CAGGAAGCCCAGCAGGAAAGTGTAGACCACGAAGACTaGCGACCAGGCCGGGTGTGGCCACTGCAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: QEAQQESVDHED*RPGRVWPLQVA
Trigger: TGCAACCTGCAGTGGCCACACCCGGCCTGGTCGGCAGTCTTCGTGGTCTACACTTTCCTGCTGGGCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255008.5