Pregenerated sensors for SST (Homo sapiens)
Ensembl gene IDs: ENSG00000157005Ensembl transcript IDs: ENST00000287641.4
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAAACCGAGGGAGCGCCGGTaGCACAGCCCAGGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GVWGRGIRGLIWTILVKKPRERR*HSPGPG Trigger: TCCTGGCCCTGGGCTGTGTCACCGGCGCTCCCTCGG...TTTCTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | GATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGGCAGCCAGCGCGCACTaGAGGCGGCAGGACAGCATC | + |
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Preference number: 4 (lower is better) Translates to: DGVWGRGIRGLIWTILVKAASAH*RRQDSI Trigger: GATGCTGTCCTGCCGCCTCCAGTGCGCGCTGGCTGC...CTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | GGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAAACCAGGGCCAGGACGATaGACAGCGCAGCCAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GVWGRGIRGLIWTILVKKPGPGR*TAQPAR Trigger: GCGCGCTGGCTGCGCTGTCCATCGTCCTGGCCCTGG...TTTCTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR GCA 90 bp | AGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTTACTTGGCCAGTTCCTaGTTCCCCGCGGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RDGVWGRGIRGLIWTILVYLASS*FPAAAA Trigger: GGCTGCTGCCGCGGGGAAGCAGGAACTGGCCAAGTA...AACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | GGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAAAGAAACTGACGGAGTCTaGGGTCCGAGGGAGCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GVWGRGIRGLIWTILVKKETDGV*GPRERR Trigger: CCGGCGCTCCCTCGGACCCCAGACTCCGTCAGTTTC...TTTCTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR TCA 90 bp | AGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTGACTTCTGCAGAAACTaGCGGAGTCTGGGGTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RDGVWGRGIRGLIWTILVDFCRN*RSLGSE Trigger: CTCGGACCCCAGACTCCGTCAGTTTCTGCAGAAGTC...AACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | GGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAAAAGCAGGCAGCAGCGATaGCTCCGAACCTCGCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: GVWGRGIRGLIWTILVKKSRQQR*LRTSLL Trigger: TAGGAGCGAGGTTCGGAGCCATCGCTGCTGCCTGCT...TTTCTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | GATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGGAGCTGGAGAGTGGCTaGTCAAACTCTAGGCGCGGA | + |
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Preference number: 4 (lower is better) Translates to: DGVWGRGIRGLIWTILVKELESG*SNSRRG Trigger: TCCGCGCCTAGAGTTTGACCAGCCACTCTCCAGCTC...CTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | GATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGCCGCGAAAGCCGAGCTaGAGAGTGGCTGGTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: DGVWGRGIRGLIWTILVKPRKPS*RVAGQT Trigger: AGTTTGACCAGCCACTCTCCAGCTCGGCTTTCGCGG...CTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR GCA 90 bp | GAGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTTCAGACAGCAGCTCTaGCAAGAAGTACTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ERWGVGARDQRSDMDNTSFRQQL*QEVLGQ Trigger: CTGGCCAAGTACTTCTTGGCAGAGCTGCTGTCTGAA...ACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR GCA 90 bp | GATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAGCCTCATTTCATCCTaGTCAGCAGCCTGGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: DGVWGRGIRGLIWTILVKSLISS*SAAWDR Trigger: TCTGTCCCAGGCTGCTGAGCAGGATGAAATGAGGCT...CTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | GGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAAACTGCCAAGAAGTACTTaGCCAGTTCCTGCTTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: GVWGRGIRGLIWTILVKKLPRST*PVPASP Trigger: CGGGGAAGCAGGAACTGGCCAAGTACTTCTTGGCAG...TTTCTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | AGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTCATTCTCCGTCTGGTTaGGTTCAGACAGCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RDGVWGRGIRGLIWTILVHSPSG*VQTAAL Trigger: CAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATG...AACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | GATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGGCATCATTCTCCGTCTaGTTGGGTTCAGACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DGVWGRGIRGLIWTILVKASFSV*LGSDSS Trigger: GCTGCTGTCTGAACCCAACCAGACGGAGAATGATGC...CTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR TCA 90 bp | GGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAAATGCCATAGCCGGGTTTaGGTTAGCAGATCTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GVWGRGIRGLIWTILVKKCHSRV*VSRSLQ Trigger: CTGCAGAGATCTGCTAACTCAAACCCGGCTATGGCA...TTTCTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR TCA 90 bp | GGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAAAATGCAAGGGTCTCGCTaGAGACTTGGAGGATTAGGG | + |
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Preference number: 4 (lower is better) Translates to: GVWGRGIRGLIWTILVKKMQGSR*RLGGLG Trigger: CCCTAATCCTCCAAGTCTTCAGCGAGACCCTTGCAT...TTTCTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CCA 90 bp | AGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTGTCTCGCTGAAGACTTaGAGGATTAGGGAAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RDGVWGRGIRGLIWTILVVSLKT*RIREER Trigger: TCTCTCTTCCCTAATCCTCCAAGTCTTCAGCGAGAC...AACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR GCA 90 bp | AGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTGAGTTAGCAGATCTCTaGAGCTCAAGCCTCATTTCA | + |
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Preference number: 4 (lower is better) Translates to: RDGVWGRGIRGLIWTILVELADL*SSSLIS Trigger: TGAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTC...AACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR TCA 90 bp | GGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGAAAAAAGCTAACAGGATGTaGAAGTCTTCCAGAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GVWGRGIRGLIWTILVKKKANRM*KSSRRN Trigger: ATTTCTTCTGGAAGACTTTCACATCCTGTTAGCTTT...TTTCTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 90 bp | ACACAGCCCAGGGCCAGGACGATGGACAGCGCAGCCAGCGCGCACTaGAGGCGGCAGGACAGCATCTCGGCGCCGCGAAAGCCGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TQPRARTMDSAASAH*RRQDSISAPRKPSW Trigger: CCAGCTCGGCTTTCGCGGCGCCGAGATGCTGTCCTGCCGCCTCCAGTGCGCGCTGGCTGCGCTGTCCATCGTCCTGGCCCTGGGCTGTGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS TCA 90 bp | ACTTCTGCAGAAACTGACGGAGTCTGGGGTCCGAGGGAGCGCCGGTaGCACAGCCCAGGGCCAGGACGATGGACAGCGCAGCCAGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: TSAETDGVWGPRERR*HSPGPGRWTAQPAR Trigger: GCGCGCTGGCTGCGCTGTCCATCGTCCTGGCCCTGGGCTGTGTCACCGGCGCTCCCTCGGACCCCAGACTCCGTCAGTTTCTGCAGAAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 90 bp | GCAGGACAGCATCTCGGCGCCGCGAAAGCCGAGCTGGAGAGTGGCTaGTCAAACTCTAGGCGCGGATCAGCAGGCAGCAGCGATGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AGQHLGAAKAELESG*SNSRRGSAGSSDGS Trigger: GGAGCCATCGCTGCTGCCTGCTGATCCGCGCCTAGAGTTTGACCAGCCACTCTCCAGCTCGGCTTTCGCGGCGCCGAGATGCTGTCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 90 bp | CACTGGAGGCGGCAGGACAGCATCTCGGCGCCGCGAAAGCCGAGCTaGAGAGTGGCTGGTCAAACTCTAGGCGCGGATCAGCAGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: HWRRQDSISAPRKPS*RVAGQTLGADQQAA Trigger: TGCTGCCTGCTGATCCGCGCCTAGAGTTTGACCAGCCACTCTCCAGCTCGGCTTTCGCGGCGCCGAGATGCTGTCCTGCCGCCTCCAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS GCA 90 bp | TTCCAGGGCATCATTCTCCGTCTGGTTGGGTTCAGACAGCAGCTCTaGCAAGAAGTACTTGGCCAGTTCCTGCTTCCCCGCGGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: FQGIILRLVGFRQQL*QEVLGQFLLPRGSS Trigger: GCTGCTGCCGCGGGGAAGCAGGAACTGGCCAAGTACTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 90 bp | GCAGCCTGGGACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCTaGTTGGGTTCAGACAGCAGCTCTGCCAAGAAGTACTTGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: AAWDRSSGSRASFSV*LGSDSSSAKKYLAS Trigger: ACTGGCCAAGTACTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAAGATCTGTCCCAGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 90 bp | CCTGGGACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCTGGTTaGGTTCAGACAGCAGCTCTGCCAAGAAGTACTTGGCCAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: PGTDLQVPGHHSPSG*VQTAALPRSTWPVP Trigger: AGGAACTGGCCAAGTACTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAAGATCTGTCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CAA 90 bp | GAGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTCTGCCAAGAAGTACTaGGCCAGTTCCTGCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: ERWGVGARDQRSDMDNTSSAKKY*ASSCFP Trigger: GGGGAAGCAGGAACTGGCCAAGTACTTCTTGGCAGA...ACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS TCA 90 bp | ATTCTTGCAGCCAGCTTTGCGTTCTCGGGGTGCCATAGCCGGGTTTaGGTTAGCAGATCTCTGCAGCTCAAGCCTCATTTCATCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: ILAASFAFSGCHSRV*VSRSLQLKPHFILL Trigger: GAGCAGGATGAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTCAAACCCGGCTATGGCACCCCGAGAACGCAAAGCTGGCTGCAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CAA 90 bp | GAGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTCATTCTCCGTCTGGTaGGGTTCAGACAGCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ERWGVGARDQRSDMDNTSSFSVW*GSDSSS Trigger: AGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGA...ACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CAA 90 bp | GATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTAAGTTCTTGCAGCCAGCTTaGCGTTCTCGGGGTGCCATA | + |
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Preference number: 5 (lower is better) Translates to: DGVWGRGIRGLIWTILVKFLQPA*RSRGAI Trigger: TATGGCACCCCGAGAACGCAAAGCTGGCTGCAAGAA...CTTAACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS GCA 90 bp | GGGTTTGAGTTAGCAGATCTCTGCAGCTCAAGCCTCATTTCATCCTaGTCAGCAGCCTGGGACAGATCTTCAGGTTCCAGGGCATCATTC | + |
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Preference number: 5 (lower is better) Translates to: GFELADLCSSSLISS*SAAWDRSSGSRASF Trigger: GAATGATGCCCTGGAACCTGAAGATCTGTCCCAGGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTCAAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS-3UTR CAA 90 bp | AGAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGACAATACTAGTTTTCCAGAAGAAATTCTaGCAGCCAGCTTTGCGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RDGVWGRGIRGLIWTILVFQKKF*QPALRS Trigger: AGAACGCAAAGCTGGCTGCAAGAATTTCTTCTGGAA...AACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS TCA 90 bp | AGAGGTCTGATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTaGAAGTCTTCCAGAAGAAATTCTTGCAGCCAGCTTTGCGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RGLIWTILVKKANRM*KSSRRNSCSQLCVL Trigger: GAGAACGCAAAGCTGGCTGCAAGAATTTCTTCTGGAAGACTTTCACATCCTGTTAGCTTTCTTAACTAGTATTGTCCATATCAGACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 72 bp | AGGGCCAGGACGATGGACAGCGCAGCCAGCGCGCACTaGAGGCGGCAGGACAGCATCTCGGCGCCGCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RARTMDSAASAH*RRQDSISAPRK Trigger: CTTTCGCGGCGCCGAGATGCTGTCCTGCCGCCTCCAGTGCGCGCTGGCTGCGCTGTCCATCGTCCTGGCCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 72 bp | CATCTCGGCGCCGCGAAAGCCGAGCTGGAGAGTGGCTaGTCAAACTCTAGGCGCGGATCAGCAGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HLGAAKAELESG*SNSRRGSAGSS Trigger: GCTGCTGCCTGCTGATCCGCGCCTAGAGTTTGACCAGCCACTCTCCAGCTCGGCTTTCGCGGCGCCGAGATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS GCA 72 bp | CGGGGTGCCATAGCCGGGTTTGAGTTAGCAGATCTCTaGAGCTCAAGCCTCATTTCATCCTGCTCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RGAIAGFELADL*SSSLISSCSAA Trigger: GGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTCAAACCCGGCTATGGCACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CAA 90 bp | GCCTGGGACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCTGGTaGGGTTCAGACAGCAGCTCTGCCAAGAAGTACTTGGCCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: AWDRSSGSRASFSVW*GSDSSSAKKYLASS Trigger: GGAACTGGCCAAGTACTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAAGATCTGTCCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS TCA 72 bp | GCCAGCTTTGCGTTCTCGGGGTGCCATAGCCGGGTTTaGGTTAGCAGATCTCTGCAGCTCAAGCCTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: ASFAFSGCHSRV*VSRSLQLKPHF Trigger: GAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTCAAACCCGGCTATGGCACCCCGAGAACGCAAAGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS GCA 72 bp | ATCATTCTCCGTCTGGTTGGGTTCAGACAGCAGCTCTaGCAAGAAGTACTTGGCCAGTTCCTGCTTCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: IILRLVGFRQQL*QEVLGQFLLPR Trigger: GCGGGGAAGCAGGAACTGGCCAAGTACTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS GCA 72 bp | TTAGCAGATCTCTGCAGCTCAAGCCTCATTTCATCCTaGTCAGCAGCCTGGGACAGATCTTCAGGTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LADLCSSSLISS*SAAWDRSSGSR Trigger: CCTGGAACCTGAAGATCTGTCCCAGGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAGAGATCTGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 72 bp | GATCTTCAGGTTCCAGGGCATCATTCTCCGTCTGGTTaGGTTCAGACAGCAGCTCTGCCAAGAAGTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: DLQVPGHHSPSG*VQTAALPRSTW Trigger: CCAAGTACTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CCA 72 bp | GACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCTaGTTGGGTTCAGACAGCAGCTCTGCCAAGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: DRSSGSRASFSV*LGSDSSSAKKY Trigger: GTACTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAAGATCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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| CDS CAA 72 bp | AGATCTTCAGGTTCCAGGGCATCATTCTCCGTCTGGTaGGGTTCAGACAGCAGCTCTGCCAAGAAGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: RSSGSRASFSVW*GSDSSSAKKYL Trigger: CAAGTACTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287641.4 |
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