RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SSRP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000149136

Ensembl transcript IDs: ENST00000278412.7, ENST00000293880.9, ENST00000526696.6, ENST00000529002.2, ENST00000635721.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACCCCTaGTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAG +
Preference number: 1 (lower is better)
Translates to: NRPQVGATGLASHDP*SSNLNRTSSSYILK
Trigger: CTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGGGTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR GCA 90 bp AAACAGCCATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTaGCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGC +
Preference number: 1 (lower is better)
Translates to: KQPSLGSSRVKTSPH*PSDIHTNRRACSDG
Trigger: GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATGGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR TCA 90 bp AACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGAAAGTAAGATaGGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTATCTCTC +
Preference number: 1 (lower is better)
Translates to: NRTSSSYILKVGKVR*GFGSCIALPPTLSL
Trigger: GAGAGATAGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR CAA 90 bp GTAGGAGCTACAGGCCTGGCCTCACATGACCCCTGCTCCAGCAACTaGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGAAAGTA +
Preference number: 2 (lower is better)
Translates to: VGATGLASHDPCSSN*NRTSSSYILKVGKV
Trigger: TACTTTCCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGGGTCATGTGAGGCCAGGCCTGTAGCTCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR-3UTR GCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACAAGACGTCTCCCCACTaGCCTAGTGACATACACACC +
Preference number: 2 (lower is better)
Translates to: NESRNRPQVGATGLASHDKTSPH*PSDIHT
Trigger: GGTGTGTATGTCACTAGGGCAGTGGGGAGACGTCTT...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR-3UTR CCA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTATAAACAGCCATCCTTaGGAAGCAGCAGAGTTAAGA +
Preference number: 2 (lower is better)
Translates to: GRESKMRIWILHCPASHPINSHP*EAAELR
Trigger: TCTTAACTCTGCTGCTTCCCAAGGATGGCTGTTTAT...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR-3UTR TCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAAAGGGACTGCATTTCATaGGGAGAAACTGGTACCAAA +
Preference number: 2 (lower is better)
Translates to: HCPSDIHTNRRACSDGTERDCIS*GETGTK
Trigger: TTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCT...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR-3UTR CCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATTCATGAGGAGAAACTaGTACCAAAATATGGGTGGG +
Preference number: 2 (lower is better)
Translates to: HCPSDIHTNRRACSDGTEFMRRN*YQNMGG
Trigger: CCCACCCATATTTTGGTACCAGTTTCTCCTCATGAA...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR GCA 72 bp CAGGTAGGAGCTACAGGCCTGGCCTCACATGACCCCTaGTCCAGCAACTTGAACAGGACAAGCAGCAGCTAC +
Preference number: 3 (lower is better)
Translates to: QVGATGLASHDP*SSNLNRTSSSY
Trigger: GTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGGGTCATGTGAGGCCAGGCCTGTAGCTCCTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR TCA 72 bp AGCAGCAGCTACATCCTTAAGGTCGGGAAAGTAAGATaGGGATTTGGATCCTGCATTGCCCTGCCTCCCACC +
Preference number: 3 (lower is better)
Translates to: SSSYILKVGKVR*GFGSCIALPPT
Trigger: GGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACCTTAAGGATGTAGCTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR GCA 72 bp TCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTaGCCTAGTGACATACACACCAACAGGAGAGCATGT +
Preference number: 3 (lower is better)
Translates to: SLGSSRVKTSPH*PSDIHTNRRAC
Trigger: ACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR CCA 72 bp CACCCTATCTCTCCCCAAATTATAAACAGCCATCCTTaGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCC +
Preference number: 3 (lower is better)
Translates to: HPISPQIINSHP*EAAELRRLPTA
Trigger: GGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATGGCTGTTTATAATTTGGGGAGAGATAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTCTGGGCCCCAACTCCTaGGTGGGTGTGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: GRESKMRIWILHCPASHPLGPNS*VGVRML
Trigger: GAGCATCCGCACACCCACTCAGGAGTTGGGGCCCAG...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAAGAAGCTTTTCCCGCGTaGGCGGCCCCGCGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: HCPSDIHTNRRACSDGTEEAFPA*AAPRPA
Trigger: GGCGGGACGCGGGGCCGCGCACGCGGGAAAAGCTTC...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCGACCCCTGCCTGTGGTaGCCTGGGCAGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DIHTNRRACSDGTESRDCDPCLW*PGQSPR
Trigger: CCTGGGGCTCTGCCCAGGCCACCACAGGCAGGGGTC...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACGCTTGTGGACGTAGATaGAGCCCCGCTCCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYACGRR*SPAPAG
Trigger: ACCCGCTGGAGCGGGGCTTCATCTACGTCCACAAGC...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCAGGAATCTCCTCAGGCTaGGGCCTCGCGAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASGISSG*GLARAP
Trigger: CGGGGCCCTCGCGAGGCCGCAGCCTGAGGAGATTCC...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCTGCCATGTCGACCCCTaGCTGTGGTGGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DIHTNRRACSDGTESRDCCHVDP*LWWPGQ
Trigger: CTGCCCAGGCCACCACAGGCAGGGGTCGACATGGCA...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGGCAGCTCCCGGAAGATaGAGATGGCATCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGAAPGR*RWHLPW
Trigger: CCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGC...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTGCCCCAACTCCTGAGTaGGTGTGCGGATGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRESKMRIWILHCPASHPAPTPE*VCGCSA
Trigger: TGCTGAGCATCCGCACACCCACTCAGGAGTTGGGGC...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCATCCTCCTGGGTGGGTaGGACGTAGAAGCGCACCTC +
Preference number: 4 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGILLGG*DVEAHL
Trigger: GAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGAT...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACACACCATCCTCCTGGGTaGGTGGGACGTAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTHHPPG*VGRRSA
Trigger: TGCGCTTCTACGTCCCACCCACCCAGGAGGATGGTG...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACGCCCCTGAGTGCCCTTaGAAGTTGCCTGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYAPECP*KLPGTV
Trigger: CACAGTGCCAGGCAACTTCCAAGGGCACTCAGGGGC...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACAATGCACTGGGCCCCTaGGTGCCCTTGGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: NESRNRPQVGATGLASHDNALGP*VPLEVA
Trigger: GGCAACTTCCAAGGGCACTCAGGGGCCCAGTGCATT...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTGAGTGGGTGTGCGGATaGTCAGCAGGTTGGGAATCT +
Preference number: 4 (lower is better)
Translates to: GRESKMRIWILHCPASHPEWVCG*SAGWES
Trigger: AGATTCCCAACCTGCTGAGCATCCGCACACCCACTC...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAACTCCTGAGTGGGTGTaGGGATGCTCAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTTPEWV*GCSAGW
Trigger: CCAACCTGCTGAGCATCCGCACACCCACTCAGGAGT...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACGAACTCCAGTGTCTCTaGCATGTCGACCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYELQCL*HVDPCL
Trigger: CAGGCAGGGGTCGACATGGCAGAGACACTGGAGTTC...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACCGAGGAGTCAGACACTaGAGCTCCCGGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYRGVRH*SSRKMQ
Trigger: CTGCATCTTCCGGGAGCTGCAGTGTCTGACTCCTCG...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACCCTCCACAGGCTTCTTaGGGCTCTTGCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NESRNRPQVGATGLASHDPPQAS*GSCGPW
Trigger: CCAAGGACCGCAAGAGCCGCAAGAAGCCTGTGGAGG...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACGGATGCTCAGCAGGTTaGGAATCTCCTCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYGCSAG*ESPQAA
Trigger: CGCAGCCTGAGGAGATTCCCAACCTGCTGAGCATCC...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGGGAAACCAAGTAAACTaGGAGCTGGGCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGGNQVN*ELGPNS
Trigger: GGAGTTGGGGCCCAGCTCCCAGTTTACTTGGTTTCC...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTTTGCCTGTGGTGCACTaGGACACATTGCTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GRESKMRIWILHCPASHPLPVVH*DTLLRG
Trigger: ACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAA...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGGCATCTCCCGTGGCCTaGATTACATCCGCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGASPVA*ITSAFD
Trigger: GTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGC...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACGAACAGGTAATGCACTaGGCCCCTGAGTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYEQVMH*APECPW
Trigger: CCAAGGGCACTCAGGGGCCCAGTGCATTACCTGTTC...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACAGAAGCGCACCTCCATaGGAGACACCTCTGCGTCAT +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYRSAPP*ETPLRH
Trigger: ATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCT...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACCTGACATGTTCTTGGTaGGCCGACCCTCAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYLTCSW*ADPQSA
Trigger: AGCGCTTTGAGGGTCGGCTCACCAAGAACATGTCAG...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGAGTTGCCTGGCACTGTaGTCTTGCGGTTTACCAGTG +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGSCLAL*SCGLPV
Trigger: CACTGGTAAACCGCAAGATCACAGTGCCAGGCAACT...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACACCTGCTCCAGCAACTTaGACAGGACAAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTPAPAT*TGQAAA
Trigger: AGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGG...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGCTTGCGGTTTACCAGTaGTTTCATGACCCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGLAVYQ*FHDPAD
Trigger: GTCAGCCGGGTCATGAAAGCACTGGTAAACCGCAAG...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACACTGGGCCCCTGAGTaGCCTTGGAAGTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASHWAPE*PWKLPG
Trigger: GCCAGGCAACTTCCAAGGGCACTCAGGGGCCCAGTG...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAAGCTGGCAGAGGCGTTaGTGTCAAACTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTSWQRR*CQTPLP
Trigger: TGGCAGAGGAGTTTGACAGCAACGCCTCTGCCAGCT...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACGGGCATTGGGGTCTTTaGCCTTCTTCACCTCCACAG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYGHWGL*PSSPPQ
Trigger: CTGTGGAGGTGAAGAAGGGCAAAGACCCCAATGCCC...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGCCCTTGGAAGTTGCCTaGCACTGTGATCTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGPLEVA*HCDLAV
Trigger: AACCGCAAGATCACAGTGCCAGGCAACTTCCAAGGG...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGGCGGATGTGCACAGGTaGCTTGTGGACGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGADVHR*LVDVDE
Trigger: TTCATCTACGTCCACAAGCCACCTGTGCACATCCGC...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACTGTCACCCTCATTACTaGAGGAGCTGGCAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYCHPHY*RSWQRR
Trigger: ACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACA...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACGCATGTATGCAGACATaGGCCTCTTGGGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYACMQT*ASWGHW
Trigger: CCAATGCCCCCAAGAGGCCCATGTCTGCATACATGC...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACACTGAGTCCTCTGAGCTaGGGGGAGTACTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTLSPLS*GEYWLV
Trigger: AACTAGCCAGTACTCCCCCCAGCTCAGAGGACTCAG...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACATTGAAGATGATGCCCTaGCGGCTCAACCTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTLKMMP*RLNLSR
Trigger: TCGACTGAGGTTGAGCCGTCAGGGCATCATCTTCAA...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGCAAACTCTTTGCTCTTaGAGCTCTCGCTTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGQTLCS*SSRLAA
Trigger: GGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTTTG...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACATCTCCTCCCGGATCTTaGCTTCCTCCTTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTSPPGS*LPPSSS
Trigger: AGAGGATGAAGGAGGAAGGCAAGATCCGGGAGGAGA...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCAAGACGTCTCCCCACTaGCCTAGTGACATACACACC +
Preference number: 4 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGKTSPH*PSDIHT
Trigger: GGTGTGTATGTCACTAGGGCAGTGGGGAGACGTCTT...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACATTTGGATCCTGCATTaGCCTGCCTCCCACCCTATC +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYIWILH*PASHPI
Trigger: GATAGGGTGGGAGGCAGGGCAATGCAGGATCCAAAT...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCGCCTCACATGACCCCTaGTCCAGCAACTTGAACAGG +
Preference number: 4 (lower is better)
Translates to: DIHTNRRACSDGTESRDCASHDP*SSNLNR
Trigger: CCTGTTCAAGTTGCTGGAGCAGGGGTCATGTGAGGC...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACAGCAGTTTAAGTCCATaGCCCAGAGCAACACGGCGC +
Preference number: 4 (lower is better)
Translates to: NESRNRPQVGATGLASHDSSLSP*PRATRR
Trigger: GCGCCGTGTTGCTCTGGGCCATGGACTTAAACTGCT...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACTGGCGCTGGTCCTTGTaGGGTAACAAAAACAGACGC +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYWRWSL*GNKNRR
Trigger: GCGTCTGTTTTTGTTACCCCACAAGGACCAGCGCCA...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGATCACAAAGAACATCTaGCGCTGGTCCTTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGITKNI*RWSLWG
Trigger: ACCCCACAAGGACCAGCGCCAGATGTTCTTTGTGAT...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAACAGACATGGGCCTCTTaGGGGCATTGGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: HCPSDIHTNRRACSDGTEQTWAS*GHWGLC
Trigger: GCAAAGACCCCAATGCCCCCAAGAGGCCCATGTCTG...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTTTTCATAGTCCCTCCTaGCATCCTCAGCCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: GRESKMRIWILHCPASHPFHSPS*HPQPCD
Trigger: ATCGCAAGGCTGAGGATGCCAGGAGGGACTATGAAA...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CAGGGACTGCATTTCATGAGGAGAAACTGGTACCAAAATATGGGTGGGGAGTCGCGGGTAGAGCAGTCCTaGGCTTGCCTTGTAGGAACA +
Preference number: 4 (lower is better)
Translates to: QGLHFMRRNWYQNMGGESRVEQS*ACLVGT
Trigger: TGTTCCTACAAGGCAAGCTCAGGACTGCTCTACCCG...CGACTCCCCACCCATATTTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCCAGGATGGTCTGACTTaGTCTTCTCTCGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: DIHTNRRACSDGTESRDCQDGLT*SSLGWH
Trigger: ATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTG...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACGTGTCACCTCATTCTTaGCTGTGGTGCACTGGGACA +
Preference number: 4 (lower is better)
Translates to: NESRNRPQVGATGLASHDVSPHS*LWCTGT
Trigger: TGTCCCAGTGCACCACAGGCAAGAATGAGGTGACAC...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACTCAAAGGTCTTGCCATaGAGGTGCAGAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: NESRNRPQVGATGLASHDSKVLP*RCRKVG
Trigger: CCCCACCTTTCTGCACCTGCATGGCAAGACCTTTGA...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCATCGAAGCGGATGTaGACAGGTGGCTTGTGGACG +
Preference number: 4 (lower is better)
Translates to: HCPSDIHTNRRACSDGTESSKRM*TGGLWT
Trigger: CGTCCACAAGCCACCTGTGCACATCCGCTTCGATGA...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CAGGGACTGCATTTCATGAGGAGAAACTGGTACCAAAATATGGGTGGGGAGTCGGAGCCACAGCATGTATaGAGACATGGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGLHFMRRNWYQNMGGESEPQHV*RHGPLG
Trigger: CCCAAGAGGCCCATGTCTGCATACATGCTGTGGCTC...CGACTCCCCACCCATATTTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCCTTCCAGATCTCGCCTaGCTTCTTGGAAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGLPDLA*LLGKIR
Trigger: ACGGATCTTTCCAAGAAGGCAGGCGAGATCTGGAAG...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACAAGCTCTCGCTTAGCTaGCTTGAGGACGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYKLSLS*LEDDLD
Trigger: ATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGAGCTT...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGAAGAACATCTGGCGCTaGTCCTTGTGGGGTAACAAA +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGKNIWR*SLWGNK
Trigger: TTTGTTACCCCACAAGGACCAGCGCCAGATGTTCTT...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCTTGGCCTTGCTTGATTaGGGGATCCAGGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: DIHTNRRACSDGTESRDCLALLD*GIQADH
Trigger: GTGATCAGCCTGGATCCCCCAATCAAGCAAGGCCAA...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCCATTACTGGAGGAGCTaGCAGAGGCGTTGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: DIHTNRRACSDGTESRDCHYWRS*QRRCCQ
Trigger: TTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATG...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAACTCATAGAGGGATCCTaGCATGTTCTTGGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: HCPSDIHTNRRACSDGTELIEGS*HVLGEP
Trigger: CGGCTCACCAAGAACATGTCAGGATCCCTCTATGAG...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCATCGGTTTCTTCTCCTaGGTCATCGCTGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGIGFFS*VIAAVI
Trigger: AATGACAGCAGCGATGACTCAGGAGAAGAAACCGAT...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACTTCACCTGGGTTGAATaGCTCATCGGTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYFTWVE*LIGFFS
Trigger: GGAGAAGAAACCGATGAGTCATTCAACCCAGGTGAA...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCCCTCTTCACCTGGGTTaGATGACTCATCGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGPLHLG*MTHRFL
Trigger: AAGAAACCGATGAGTCATTCAACCCAGGTGAAGAGG...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCATCTCTCGGCTGGCATTaGGCCACAGCATGTATGCAG +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASSLGWH*ATACMQ
Trigger: CTGCATACATGCTGTGGCTCAATGCCAGCCGAGAGA...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTAGGGACTGCATTTCATaGGGAGAAACTGGTACCAAA +
Preference number: 4 (lower is better)
Translates to: GRESKMRIWILHCPASHPRDCIS*GETGTK
Trigger: TTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCT...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACCATGAGAGACACCTCTaGGTCATCGTTTTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYHERHL*VIVLVE
Trigger: TTCCACCAAAACGATGACGCAGAGGTGTCTCTCATG...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR GCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACTGTAGTCAAAGGTCTTaGCATGCAGGTGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYCSQRS*HAGAER
Trigger: CCTTTCTGCACCTGCATGGCAAGACCTTTGACTACA...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGGTCGACCATCATTCATaGAACCTTTCACCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGVDHHS*NLSPPD
Trigger: ATCAGGAGGTGAAAGGTTCCATGAATGATGGTCGAC...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACTTTGACAACACATTCTaGGCAAAGGCCTCAACAGGG +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYFDNTF*AKASTG
Trigger: CCCTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAA...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCAAGATGGCATCTCCCGTaGCCTGGATTACATCCGCCT +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASRWHLP*PGLHPP
Trigger: AGGCGGATGTAATCCAGGCCACGGGAGATGCCATCT...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAACAGACGCAGTACTGTaGTGTAGGGGATCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTTDAVL*CRGSCS
Trigger: ACTACAAGATCCCCTACACCACAGTACTGCGTCTGT...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
3UTR CAA 72 bp CCACCCTATCTCTCCCCAAATTATAAACAGCCATCCTaGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PPYLSPNYKQPS*GSSRVKTSPHC
Trigger: GCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATGGCTGTTTATAATTTGGGGAGAGATAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACCTGATAGACGTCGTTaGACTCCAGTGTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASPDRRR*TPVSLP
Trigger: TGGCAGAGACACTGGAGTTCAACGACGTCTATCAGG...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCGATTACATCCGCCTTTaGCAACACATTCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGDYIRL*QHILGK
Trigger: TTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATC...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACTGCTGAAGGTATACTaGGTGCCCTGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASLLKVY*VPCLVS
Trigger: TGAGACCAAGCAGGGCACTCAGTATACCTTCAGCAG...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCAGATGCCAGGATGGTCTaGCTTGATCTTCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASDARMV*LDLLSA
Trigger: AGCCGAGAGAAGATCAAGTCAGACCATCCTGGCATC...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCGTCGGGAAAGTAAGATaGGGATTTGGATCCTGCATT +
Preference number: 4 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGVGKVR*GFGSCI
Trigger: AATGCAGGATCCAAATCCTCATCTTACTTTCCCGAC...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGGGTATCTCAAAGACTaGCTGGTCACCAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTGYLKD*LVTNVK
Trigger: TTTGACATTGGTGACCAGCCAGTCTTTGAGATACCC...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACGCGTCATCGTTTTGGTaGAATTCCAGTGTCACCTCA +
Preference number: 4 (lower is better)
Translates to: NESRNRPQVGATGLASHDASSFW*NSSVTS
Trigger: TGAGGTGACACTGGAATTCCACCAAAACGATGACGC...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACTCTGCGTCATCGTTTTaGTGGAATTCCAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: NESRNRPQVGATGLASHDSASSF*WNSSVT
Trigger: GGTGACACTGGAATTCCACCAAAACGATGACGCAGA...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAAGCAGGTGCAGAAAGGTaGGGTAGATCCGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HCPSDIHTNRRACSDGTEAGAER*GRSECH
Trigger: ATGACATTCGGATCTACCCCACCTTTCTGCACCTGC...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATCGCTGCTGTCATTaGCATTCTCCTCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASHRCCH*HSPPGS
Trigger: AGATCCGGGAGGAGAATGCCAATGACAGCAGCGATG...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAAGAGAGCATGTTCAGATaGCACAGAATCCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: HCPSDIHTNRRACSDGTEESMFR*HRIQGL
Trigger: CAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTC...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CAGGGACTGCATTTCATGAGGAGAAACTGGTACCAAAATATGGGTGGGGAGTCGCCATCTTGGCCTTTTTaGGCTGTTTCCGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QGLHFMRRNWYQNMGGESPSWPF*AVSASS
Trigger: AGAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGG...CGACTCCCCACCCATATTTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCAGTTAACTCCCCAGCCTaGATGTTGTCCACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASVNSPA*MLSTLP
Trigger: AGGCAAAGTGGACAACATCCAGGCTGGGGAGTTAAC...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAACTGAGTGCCCTGCTTaGTCTCAATTTCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTTECPA*SQFQSQ
Trigger: TTGACTTTGAAATTGAGACCAAGCAGGGCACTCAGT...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAAAGTAAGATGAGGATTTaGATCCTGCATTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HCPSDIHTNRRACSDGTESKMRI*ILHCPA
Trigger: GGCAGGGCAATGCAGGATCCAAATCCTCATCTTACT...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCGGCGATAGTGAGTTTTaGAGAAATCAGAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGGDSEF*RNQRVS
Trigger: AGAAACTCTCTGATTTCTTCAAAACTCACTATCGCC...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATACCACGAGCAAAGTTaGCAAAGGAGATCTCATCGA +
Preference number: 4 (lower is better)
Translates to: HCPSDIHTNRRACSDGTEYHEQS*QRRSHR
Trigger: TCGATGAGATCTCCTTTGTCAACTTTGCTCGTGGTA...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCATCTCAAAGACTGGCTaGTCACCAATGTCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: DIHTNRRACSDGTESRDCISKTG*SPMSKE
Trigger: TTCCTTTGACATTGGTGACCAGCCAGTCTTTGAGAT...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACCCTCTTTCTTCTCTTTaGACATTCCCTTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: NESRNRPQVGATGLASHDPLSSL*TFPSRS
Trigger: AGATCTGGAAGGGAATGTCCAAAGAGAAGAAAGAGG...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR TCA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACTTTCTTCTTCTTCTTTaGCTTGTCCCTCTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: HPWEAAELRRLPTALVTYFLLLL*LVPLRR
Trigger: TCTTCTAAGAGGGACAAGTCAAAGAAGAAGAAGAAA...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCAATGCTGATGCCAGGATaGTCTGACTTGATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASMLMPG*SDLIFS
Trigger: AGAGAAGATCAAGTCAGACCATCCTGGCATCAGCAT...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCATTCATGAGGAGAAACTaGTACCAAAATATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASFMRRN*YQNMGG
Trigger: CCCACCCATATTTTGGTACCAGTTTCTCCTCATGAA...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CCA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCAATAAACAGCCATCCTTaGGAAGCAGCAGAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: IQNESRNRPQVGATGLASINSHP*EAAELR
Trigger: TCTTAACTCTGCTGCTTCCCAAGGATGGCTGTTTAT...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS GCA 90 bp CTGCCTTCCTGGGACCGGGGACGACCACCACCTACCTCCTCAGGCTaGGGCCTCGCGAGGGCCCCGGCGCGAGAGGTGGGCGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LPSWDRGRPPPTSSG*GLARAPAREVGALG
Trigger: CCCCAGCGCGCCCACCTCTCGCGCCGGGGCCCTCGCGAGGCCGCAGCCTGAGGAGGTAGGTGGTGGTCGTCCCCGGTCCCAGGAAGGCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 90 bp CTGCCAGGAGCCCGCACATCGCACGCGACCCAATCCAGCTCAGAGTaGAGGGTTTCCCTCGCACCGCTCCCACCACCCCGCGGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: LPGARTSHATQSSSE*RVSLAPLPPPRGPR
Trigger: TCTGGGGCCGCGGGGTGGTGGGAGCGGTGCGAGGGAAACCCTGCACTCTGAGCTGGATTGGGTCGCGTGCGATGTGCGGGCTCCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 90 bp ACAGACGGACGCTGCAGTGCCCGAGGGTCCAGGTCCAGGCCTGGGTaGAGAACCGGGCCCGGAATACCGCTGACACCCAACCCGACGCCC +
Preference number: 5 (lower is better)
Translates to: TDGRCSARGSRSRPG*RTGPGIPLTPNPTP
Trigger: GGGCGTCGGGTTGGGTGTCAGCGGTATTCCGGGCCCGGTTCTCCACCCAGGCCTGGACCTGGACCCTCGGGCACTGCAGCGTCCGTCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293880.9
ENST00000526696.6
CDS GCA 90 bp CGCTCCGGCGGGAGCCATGGCAACGAGCAGCGGAACCCCAGGGTCTaGCAGGAGCCCGCACATCGCACGCGACCCAATCCAGCTCAGAGT +
Preference number: 5 (lower is better)
Translates to: RSGGSHGNEQRNPRV*QEPAHRTRPNPAQS
Trigger: ACTCTGAGCTGGATTGGGTCGCGTGCGATGTGCGGGCTCCTGGCAGACCCTGGGGTTCCGCTGCTCGTTGCCATGGCTCCCGCCGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 90 bp ACCTACAGACGGACGCTGCAGTGCCCGAGGGTCCAGGTCCAGGCCTaGGTGGAGAACCGGGCCCGGAATACCGCTGACACCCAACCCGAC +
Preference number: 5 (lower is better)
Translates to: TYRRTLQCPRVQVQA*VENRARNTADTQPD
Trigger: GTCGGGTTGGGTGTCAGCGGTATTCCGGGCCCGGTTCTCCACCCAGGCCTGGACCTGGACCCTCGGGCACTGCAGCGTCCGTCTGTAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293880.9
ENST00000526696.6
CDS GCA 90 bp AGCAGGCCCTGCTCCCAGGCCAGCCAATGCCTGCTCAGCACCATCTaGTGCCAAGGCAACCAGGGGAAGCCTCACCTCAACAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: SRPCSQASQCLLSTI*CQGNQGKPHLNRVH
Trigger: GTGGACCCTGTTGAGGTGAGGCTTCCCCTGGTTGCCTTGGCAGCAGATGGTGCTGAGCAGGCATTGGCTGGCCTGGGAGCAGGGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 90 bp GGAACCTTTCACCTCCTGATAGACGTCGTTGAACTCCAGTGTCTCTaGCATGTCGACCCCTGCCTGTGGTGGCCTGGGCAGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GTFHLLIDVVELQCL*HVDPCLWWPGQSPR
Trigger: CCTGGGGCTCTGCCCAGGCCACCACAGGCAGGGGTCGACATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTGAAAGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS GCA 90 bp CAGGTAGCAACTCCCAGCTGCGCCTGGATGTCTCAGGATTTCCTCTaGCTGGAAACCTACAGACGGACGCTGCAGTGCCCGAGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: QVATPSCAWMSQDFL*LETYRRTLQCPRVQ
Trigger: CTGGACCCTCGGGCACTGCAGCGTCCGTCTGTAGGTTTCCAGGCAGAGGAAATCCTGAGACATCCAGGCGCAGCTGGGAGTTGCTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293880.9
ENST00000526696.6
CDS CCA 90 bp CTGGGCAAAGGCCTCAACAGGGTCCACACCATCCTCCTGGGTGGGTaGGACGTAGAAGCGCACCTCCATGAGAGACACCTCTGCGTCATC +
Preference number: 5 (lower is better)
Translates to: LGKGLNRVHTILLGG*DVEAHLHERHLCVI
Trigger: GATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGATGGTGTGGACCCTGTTGAGGCCTTTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000526696.6
ENST00000529002.2
CDS CCA 90 bp GGGAAGCCTCACCTCAACAGGGTCCACACCATCCTCCTGGGTGGGTaGGACGTAGAAGCGCACCTCCATGAGAGACACCTCTGCGTCATC +
Preference number: 5 (lower is better)
Translates to: GKPHLNRVHTILLGG*DVEAHLHERHLCVI
Trigger: GATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGATGGTGTGGACCCTGTTGAGGTGAGGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 90 bp GTCGTTGAACTCCAGTGTCTCTGCCATGTCGACCCCTGCCTGTGGTaGCCTGGGCAGAGCCCCAGGCTGCACAAGGGAAACCAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: VVELQCLCHVDPCLW*PGQSPRLHKGNQVN
Trigger: GTTTACTTGGTTTCCCTTGTGCAGCCTGGGGCTCTGCCCAGGCCACCACAGGCAGGGGTCGACATGGCAGAGACACTGGAGTTCAACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CCA 90 bp CGCTGTGCTCACGGATGGAGCCAGGTAGCAACTCCCAGCTGCGCCTaGATGTCTCAGGATTTCCTCTGCCTGGAAACCTACAGACGGACG +
Preference number: 5 (lower is better)
Translates to: RCAHGWSQVATPSCA*MSQDFLCLETYRRT
Trigger: CGTCCGTCTGTAGGTTTCCAGGCAGAGGAAATCCTGAGACATCCAGGCGCAGCTGGGAGTTGCTACCTGGCTCCATCCGTGAGCACAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293880.9
ENST00000526696.6
CDS TCA 90 bp AGATCTCATCGAAGCGGATGTGCACAGGTGGCTTGTGGACGTAGATaGAGCCCCGCTCCAGCGGGTAGAGCAGTCCTGAGCTTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: RSHRSGCAQVACGRR*SPAPAGRAVLSLPC
Trigger: ACAAGGCAAGCTCAGGACTGCTCTACCCGCTGGAGCGGGGCTTCATCTACGTCCACAAGCCACCTGTGCACATCCGCTTCGATGAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS GCA 90 bp AGCTCCCAGAAGACCTGGGGCTGGATTGTCCACACACAGCCAACGTaGAGGGCCTATGCCCAAGTACTTCCTGCCAACTGGGTTAGTCCA +
Preference number: 5 (lower is better)
Translates to: SSQKTWGWIVHTQPT*RAYAQVLPANWVSP
Trigger: TGGACTAACCCAGTTGGCAGGAAGTACTTGGGCATAGGCCCTGCACGTTGGCTGTGTGTGGACAATCCAGCCCCAGGTCTTCTGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS-3UTR CAA 90 bp CCCTGCTCCAGCAACTTGAACAGGACAAGCAGCAGCTACATCCTTAAGGTCGGGCGGATGCTCAGCAGGTaGGGAATCTCCTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: PCSSNLNRTSSSYILKVGRMLSR*GISSGC
Trigger: GCAGCCTGAGGAGATTCCCAACCTGCTGAGCATCCG...CCCGACCTTAAGGATGTAGCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp CCACACCATCCTCCTGGGTGGGTGGGACGTAGAAGCGCACCTCCATaGGAGACACCTCTGCGTCATCGTTTTGGTGGAATTCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: PHHPPGWVGRRSAPP*ETPLRHRFGGIPVS
Trigger: TGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGATGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS GCA 90 bp GCTGGTCCTCATCAGAGTCAGCATATTCATCGTAGCTTGGGTTCATaGCCTAGCCAGGGAAGAGTTCACGGTGGGGCCAACTCACCCTCG +
Preference number: 5 (lower is better)
Translates to: AGPHQSQHIHRSLGS*PSQGRVHGGANSPS
Trigger: CGAGGGTGAGTTGGCCCCACCGTGAACTCTTCCCTGGCTAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCTGATGAGGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 90 bp AGACACTGCAGCTCCCGGAAGATGCAGATGGCATCTCCCGTGGCCTaGATTACATCCGCCTTTGACAACACATTCTGGGCAAAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RHCSSRKMQMASPVA*ITSAFDNTFWAKAC
Trigger: GCAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS-3UTR CAA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGGCTTCTTGCGGCTCTaGCGGTCCTTGGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTGFLRL*RSLAIL
Trigger: CAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCC...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTCTGGCATCCTCAGCCTaGCGATCCCACTCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: GRESKMRIWILHCPASHPLASSA*RSHSSF
Trigger: GAAAGAGGAGTGGGATCGCAAGGCTGAGGATGCCAG...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp GTCGACCATCATTCATGGAACCTTTCACCTCCTGATAGACGTCGTTaGACTCCAGTGTCTCTGCCATGTCGACCCCTGCCTGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VDHHSWNLSPPDRRR*TPVSLPCRPLPVVA
Trigger: GGCCACCACAGGCAGGGGTCGACATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTGAAAGGTTCCATGAATGATGGTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS TCA 90 bp CAGGCTTCTTGCGGCTCTTGCGGTCCTTGGCCATCTTGGCCTTTTTaGGCTGTTTCCGCTTCTTCTCATCCCGGTCACTGTCACCCTCAT +
Preference number: 5 (lower is better)
Translates to: QASCGSCGPWPSWPF*AVSASSHPGHCHPH
Trigger: ATGAGGGTGACAGTGACCGGGATGAGAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS GCA 90 bp CTGGGTGGGTGGGACGTAGAAGCGCACCTCCATGAGAGACACCTCTaGGTCATCGTTTTGGTGGAATTCCAGTGTCACCTCATTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LGGWDVEAHLHERHL*VIVLVEFQCHLILA
Trigger: GGCAAGAATGAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS GCA 90 bp TGTCATAACGACCACGAGGAGTCAGACACTGCAGCTCCCGGAAGATaGAGATGGCATCTCCCGTGGCCTGGATTACATCCGCCTTTGACA +
Preference number: 5 (lower is better)
Translates to: CHNDHEESDTAAPGR*RWHLPWPGLHPPLT
Trigger: TGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACTCCTCGTGGTCGTTATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
CDS GCA 90 bp AGGGAGGAAGACCAGAGGACAGTATCCACCACCAATCCCCAACACTaGTTTCTCCCATTCACTGTGGTGGCTTCAGCCATGCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: REEDQRTVSTTNPQH*FLPFTVVASAMPSP
Trigger: TGGAGAGGGCATGGCTGAAGCCACCACAGTGAATGGGAGAAAGCAGTGTTGGGGATTGGTGGTGGATACTGTCCTCTGGTCTTCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 90 bp AGACACTGCAGCTCCCGGAAGATGCAGATGGCATCTCCCGTGGCCTaGATTACATCCGCCTTTGACAACACATTCTGGGCAAAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RHCSSRKMQMASPVA*ITSAFDNTFWAKAS
Trigger: TGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000526696.6
CDS CCA 90 bp AACGACCACGAGGAGTCAGACACTGCAGCTCCCGGAAGATGCAGATaGCATCTCCCGTGGCCTGGATTACATCCGCCTTTGACAACACAT +
Preference number: 5 (lower is better)
Translates to: NDHEESDTAAPGRCR*HLPWPGLHPPLTTH
Trigger: ATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACTCCTCGTGGTCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
CDS CCA 90 bp AGCAAAGTTGACAAAGGAGATCTCATCGAAGCGGATGTGCACAGGTaGCTTGTGGACGTAGATGAAGCCCCGCTCCAGCGGGTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: SKVDKGDLIEADVHR*LVDVDEAPLQRVEQ
Trigger: CTGCTCTACCCGCTGGAGCGGGGCTTCATCTACGTCCACAAGCCACCTGTGCACATCCGCTTCGATGAGATCTCCTTTGTCAACTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CCA 90 bp GCTTCTTCTCATCCCGGTCACTGTCACCCTCATTACTGGAGGAGCTaGCAGAGGCGTTGCTGTCAAACTCCTCTGCCACATCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: ASSHPGHCHPHYWRS*QRRCCQTPLPHLPP
Trigger: AGGAGGAAGATGTGGCAGAGGAGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000635721.1
CDS CCA 90 bp GCTGTTTCCGCTTCTTCTCATCCCGGTCACTGTCACCCTCATTACTaGAGGAGCTGGCAGAGGCGTTGCTGTCAAACTCCTCTGCCACAT +
Preference number: 5 (lower is better)
Translates to: AVSASSHPGHCHPHY*RSWQRRCCQTPLPH
Trigger: ATGTGGCAGAGGAGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGCGGAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000635721.1
CDS CCA 90 bp GCTGTTTCCGCTTCTTCTCATCCCGGTCACTGTCACCCTCATTACTaGAGGAGCTGGCAGAGGCGTTGCTGTCAAACCTGCCAGAGAACA +
Preference number: 5 (lower is better)
Translates to: AVSASSHPGHCHPHY*RSWQRRCCQTCQRT
Trigger: TGTTCTCTGGCAGGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGCGGAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS-3UTR CAA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACGAGCTGGCAGAGGCGTaGCTGTCAAACTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: NESRNRPQVGATGLASHDELAEA*LSNSSA
Trigger: GGCAGAGGAGTTTGACAGCAACGCCTCTGCCAGCTC...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCACCTCCACAGGCTTCTaGCGGCTCTTGCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: DIHTNRRACSDGTESRDCTSTGF*RLLRSL
Trigger: CAAGGACCGCAAGAGCCGCAAGAAGCCTGTGGAGGT...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp GAAGATGCAGATGGCATCTCCCGTGGCCTGGATTACATCCGCCTTTaGCAACACATTCTGGGCAAAGGCCTCAACAGGGTCCACACCATC +
Preference number: 5 (lower is better)
Translates to: EDADGISRGLDYIRL*QHILGKGLNRVHTI
Trigger: GATGGTGTGGACCCTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000526696.6
CDS GCA 90 bp CTCCTGAGTCATCGCTGCTGTCATTGGCATTCTCCTCCCGGATCTTaGCTTCCTCCTTCATCCTCTCCAAGTAGGCATCATGCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: LLSHRCCHWHSPPGS*LPPSSSPSRHHAGP
Trigger: AGGACCAGCATGATGCCTACTTGGAGAGGATGAAGGAGGAAGGCAAGATCCGGGAGGAGAATGCCAATGACAGCAGCGATGACTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CCA 90 bp GGCATCATGCTGGTCCTCATCAGAGTCAGCATATTCATCGTAGCTTaGGTTCATGCCCTAGCCAGGGAAGAGTTCACGGTGGGGCCAACT +
Preference number: 5 (lower is better)
Translates to: GIMLVLIRVSIFIVA*VHALAREEFTVGPT
Trigger: AGTTGGCCCCACCGTGAACTCTTCCCTGGCTAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCTGATGAGGACCAGCATGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 90 bp CCATCCCCAGGACACCACTGGCAGAAACACTGCCTCATTCATGCCTaGAACATGGCCCAAATCCACTTCACCACTTCCCTCGGAGTAATC +
Preference number: 5 (lower is better)
Translates to: PSPGHHWQKHCLIHA*NMAQIHFTTSLGVI
Trigger: GATTACTCCGAGGGAAGTGGTGAAGTGGATTTGGGCCATGTTCCAGGCATGAATGAGGCAGTGTTTCTGCCAGTGGTGTCCTGGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 90 bp TATCCACCACCAATCCCCAACACTGCTTTCTCCCATTCACTGTGGTaGCTTCAGCCATGCCCTCTCCAGACCCAGCCACAGCAATTGGTT +
Preference number: 5 (lower is better)
Translates to: YPPPIPNTAFSHSLW*LQPCPLQTQPQQLV
Trigger: AACCAATTGCTGTGGCTGGGTCTGGAGAGGGCATGGCTGAAGCCACCACAGTGAATGGGAGAAAGCAGTGTTGGGGATTGGTGGTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS-3UTR CAA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACGAGTGCCCTTGGAAGTaGCCTGGCACTGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: HPWEAAELRRLPTALVTYECPWK*PGTVIL
Trigger: CAAGATCACAGTGCCAGGCAACTTCCAAGGGCACTC...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACGGGGCATTGGGGTCTTaGCCCTTCTTCACCTCCACA +
Preference number: 5 (lower is better)
Translates to: NESRNRPQVGATGLASHDGALGS*PFFTST
Trigger: TGTGGAGGTGAAGAAGGGCAAAGACCCCAATGCCCC...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCCCAGGATGGTCTGACTaGATCTTCTCTCGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGPGWSD*IFSRLA
Trigger: TGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGG...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACTGCCTTGAGGACGACTaGGATGATGAGCCCCTAGAG +
Preference number: 5 (lower is better)
Translates to: HPWEAAELRRLPTALVTYCLEDD*DDEPLE
Trigger: CTCTAGGGGCTCATCATCCAAGTCGTCCTCAAGGCA...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGATTTGGATCCTGCATaGCCCTGCCTCCCACCCTAT +
Preference number: 5 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTDLDPA*PCLPPY
Trigger: ATAGGGTGGGAGGCAGGGCAATGCAGGATCCAAATC...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp TACCAGTGCTTTCATGACCCGGCTGACCATCTCATAGAGGGATCCTaGCATGTTCTTGGTGAGCCGACCCTCAAAGCGCTTCTCCACTTC +
Preference number: 5 (lower is better)
Translates to: YQCFHDPADHLIEGS*HVLGEPTLKALLHF
Trigger: GAAGTGGAGAAGCGCTTTGAGGGTCGGCTCACCAAGAACATGTCAGGATCCCTCTATGAGATGGTCAGCCGGGTCATGAAAGCACTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS TCA 90 bp GCCTGCCTTCTTGGAAAGATCCGTGATGCTGATGCCAGGATGGTCTaGCTTGATCTTCTCTCGGCTGGCATTGAGCCACAGCATGTATGC +
Preference number: 5 (lower is better)
Translates to: ACLLGKIRDADARMV*LDLLSAGIEPQHVC
Trigger: GCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGCATCAGCATCACGGATCTTTCCAAGAAGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS GCA 90 bp AATTCAAGAGGAAGACAGATAAGCATGAAAGACAGCACCTCGCTGTaGTCACGGATGGAGCCAGGTAGCAACTCCCAGCTGCGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: NSRGRQISMKDSTSL*SRMEPGSNSQLRLD
Trigger: ATCCAGGCGCAGCTGGGAGTTGCTACCTGGCTCCATCCGTGAGCACAGCGAGGTGCTGTCTTTCATGCTTATCTGTCTTCCTCTTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 90 bp GGTATCTCAAAGACTGGCTGGTCACCAATGTCAAAGGAAAGCAGCTaGCCTGTGAGGAAAGGGCTTATCCAGCCACAAGCTCCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: GISKTGWSPMSKESS*PVRKGLIQPQAPPL
Trigger: AAGGGGAGGAGCTTGTGGCTGGATAAGCCCTTTCCTCACAGGGCAGCTGCTTTCCTTTGACATTGGTGACCAGCCAGTCTTTGAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 90 bp AAACCAGGTCCTAGTCCATCCCCAGGACACCACTGGCAGAAACACTaGCTCATTCATGCCTGGAACATGGCCCAAATCCACTTCACCACT +
Preference number: 5 (lower is better)
Translates to: KPGPSPSPGHHWQKH*LIHAWNMAQIHFTT
Trigger: AGTGGTGAAGTGGATTTGGGCCATGTTCCAGGCATGAATGAGGCAGTGTTTCTGCCAGTGGTGTCCTGGGGATGGACTAGGACCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 90 bp ATCTCGCCTGCCTTCTTGGAAAGATCCGTGATGCTGATGCCAGGATaGTCTGACTTGATCTTCTCTCGGCTGGCATTGAGCCACAGCATG +
Preference number: 5 (lower is better)
Translates to: ISPAFLERSVMLMPG*SDLIFSRLALSHSM
Trigger: CATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGCATCAGCATCACGGATCTTTCCAAGAAGGCAGGCGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CCA 90 bp CTTACCCCAACCACAGGCTCTAAGGGTGGGCACTTGGCCTATTTCTaGCCCATCAGACCCCAGCCCATTCTAATAACTCAGGCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: LTPTTGSKGGHLAYF*PIRPQPILITQARK
Trigger: CTTTCTAGCCTGAGTTATTAGAATGGGCTGGGGTCTGATGGGCCAGAAATAGGCCAAGTGCCCACCCTTAGAGCCTGTGGTTGGGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS-3UTR CAA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACTCCCCAGCCTGGATGTaGTCCACTTTGCCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: NESRNRPQVGATGLASHDSPAWM*STLPVL
Trigger: CAAGACAGGCAAAGTGGACAACATCCAGGCTGGGGA...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCAGTGTCACCTCATTCTaGCCTGTGGTGCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: DIHTNRRACSDGTESRDCSVTSF*PVVHWD
Trigger: GTCCCAGTGCACCACAGGCAAGAATGAGGTGACACT...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAACGAGTTTGGCCTTGCTaGATTGGGGGATCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HCPSDIHTNRRACSDGTERVWPC*IGGSRL
Trigger: CAGCCTGGATCCCCCAATCAAGCAAGGCCAAACTCG...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACGTAGCGAGTTTGGCCTaGCTTGATTGGGGGATCCAG +
Preference number: 5 (lower is better)
Translates to: NESRNRPQVGATGLASHDVASLA*LDWGIQ
Trigger: CTGGATCCCCCAATCAAGCAAGGCCAAACTCGCTAC...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCGATCCTGACATGTTCTaGGTGAGCCGACCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGDPDMF*VSRPSK
Trigger: CTTTGAGGGTCGGCTCACCAAGAACATGTCAGGATC...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACCCTGGCACTGTGATCTaGCGGTTTACCAGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: HPWEAAELRRLPTALVTYPGTVI*RFTSAF
Trigger: GAAAGCACTGGTAAACCGCAAGATCACAGTGCCAGG...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACTTCTCCTCCCGGATCTaGCCTTCCTCCTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: NESRNRPQVGATGLASHDFSSRI*PSSFIL
Trigger: GAGGATGAAGGAGGAAGGCAAGATCCGGGAGGAGAA...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAACGGCTCTTGCGGTCCTaGGCCATCTTGGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: HCPSDIHTNRRACSDGTERLLRS*AILAFL
Trigger: CAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCG...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACATTCTCTCGGCTGGCATaGAGCCACAGCATGTATGCA +
Preference number: 5 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTFSRLA*SHSMYA
Trigger: TGCATACATGCTGTGGCTCAATGCCAGCCGAGAGAA...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCATCTCGCCTGCCTTCTaGGAAAGATCCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGISPAF*ERSVML
Trigger: CAGCATCACGGATCTTTCCAAGAAGGCAGGCGAGAT...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCTCTCGCTTAGCTGCCTaGAGGACGACTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGSRLAA*RTTWMM
Trigger: CATCATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGA...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp ATGTTGTCCACTTTGCCTGTCTTGCTATTCTTGAAGATGATGCCCTaGCGGCTCAACCTCAGTCGACCATCATTCTCCTCAGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: MLSTLPVLLFLKMMP*RLNLSRPSFSSGCG
Trigger: GCCGCAGCCTGAGGAGAATGATGGTCGACTGAGGTTGAGCCGTCAGGGCATCATCTTCAAGAATAGCAAGACAGGCAAAGTGGACAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529002.2
CDS CCA 90 bp GCCTGTGGTGCACTGGGACACATTGCTGAGGGGTATCTCAAAGACTaGCTGGTCACCAATGTCAAAGGAAAGCAGCTGCCCACCAAATTT +
Preference number: 5 (lower is better)
Translates to: ACGALGHIAEGYLKD*LVTNVKGKQLPTKF
Trigger: AAATTTGGTGGGCAGCTGCTTTCCTTTGACATTGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000526696.6
ENST00000529002.2
CDS CCA 90 bp AGCTGGGCCCCAACTCCTGAGTGGGTGTGCGGATGCTCAGCAGGTTaGGAATCTGAATTCAAGAGGAAGACAGATAAGCATGAAAGACAG +
Preference number: 5 (lower is better)
Translates to: SWAPTPEWVCGCSAG*ESEFKRKTDKHERQ
Trigger: CTGTCTTTCATGCTTATCTGTCTTCCTCTTGAATTCAGATTCCCAACCTGCTGAGCATCCGCACACCCACTCAGGAGTTGGGGCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS-3UTR CAA 90 bp GGTCGGGAAAGTAAGATGAGGATTTGGATCCTGCATTGCCCTGCCTCCCACCCTGGATTACATCCGCCTTaGACAACACATTCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: GRESKMRIWILHCPASHPGLHPP*TTHSGQ
Trigger: TTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCC...AGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTCATCTTACTTTCCCGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CATCCTTGGGAAGCAGCAGAGTTAAGACGTCTCCCCACTGCCCTAGTGACATACATCTGGCGCTGGTCCTaGTGGGGTAACAAAAACAGA +
Preference number: 5 (lower is better)
Translates to: HPWEAAELRRLPTALVTYIWRWS*WGNKNR
Trigger: TCTGTTTTTGTTACCCCACAAGGACCAGCGCCAGAT...GTATGTCACTAGGGCAGTGGGGAGACGTCTTAACTCTGCTGCTTCCCAAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CAGGGACTGCATTTCATGAGGAGAAACTGGTACCAAAATATGGGTGGGGAGTCGTCATCGCTGCTGTCATaGGCATTCTCCTCCCGGATC +
Preference number: 5 (lower is better)
Translates to: QGLHFMRRNWYQNMGGESSSLLS*AFSSRI
Trigger: GATCCGGGAGGAGAATGCCAATGACAGCAGCGATGA...CGACTCCCCACCCATATTTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACCGGTCCTTGGCCATCTaGGCCTTTTTGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NESRNRPQVGATGLASHDRSLAI*AFLSCF
Trigger: GAAACAGCTCAAAAAGGCCAAGATGGCCAAGGACCG...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACCCTGCTCCAGCAACTaGAACAGGACAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: IQNESRNRPQVGATGLASPCSSN*NRTSSS
Trigger: GCTGCTGCTTGTCCTGTTCAAGTTGCTGGAGCAGGG...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp CCAGTGTCACCTCATTCTTGCCTGTGGTGCACTGGGACACATTGCTaGGGGGTATCTCAAAGACTGGCTGGTCACCAATGTCAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: PVSPHSCLWCTGTHC*GVSQRLAGHQCQRK
Trigger: TTTCCTTTGACATTGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGACACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS TCA 90 bp TGCCCTATTGTGTCACCCATACTTGGGCAATGGCCTACCCAGGTTTaGGAAGCACTACCCTACTGCAGTCAGAAGCATCTCTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: CPIVSPILGQWPTQV*EALPYCSQKHLCCL
Trigger: AAGACAGCAGAGATGCTTCTGACTGCAGTAGGGTAGTGCTTCTCAAACCTGGGTAGGCCATTGCCCAAGTATGGGTGACACAATAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 90 bp ATGTTGTCCACTTTGCCTGTCTTGCTATTCTTGAAGATGATGCCCTaGCGGCTCAACCTCAGTCGACCATCATTCTCGCTGTGCTCACGG +
Preference number: 5 (lower is better)
Translates to: MLSTLPVLLFLKMMP*RLNLSRPSFSLCSR
Trigger: CCGTGAGCACAGCGAGAATGATGGTCGACTGAGGTTGAGCCGTCAGGGCATCATCTTCAAGAATAGCAAGACAGGCAAAGTGGACAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526696.6
CDS GCA 90 bp TCATCACTAGACACAAACTCTTTGCTCTTGAAGCTCTCGCTTAGCTaGCTTGAGGACGACTTGGATGATGAGCCCCTAGAGGGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: SSLDTNSLLLKLSLS*LEDDLDDEPLEGVD
Trigger: ATCCACGCCCTCTAGGGGCTCATCATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTTTGTGTCTAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CCA 90 bp CCCAGAGCAACACGGCGCCAGATACCTTCTGTTAACTCCCCAGCCTaGATGTTGTCCACTTTGCCTGTCTTGCTATTCTTGAAGATGATG +
Preference number: 5 (lower is better)
Translates to: PRATRRQIPSVNSPA*MLSTLPVLLFLKMM
Trigger: CATCATCTTCAAGAATAGCAAGACAGGCAAAGTGGACAACATCCAGGCTGGGGAGTTAACAGAAGGTATCTGGCGCCGTGTTGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CCA 90 bp GTGGTGCACTGGGACACATTGCTGAGGGGTATCTCAAAGACTGGCTaGTCACCAATGTCAAAGGAAAGCAGCTGCCCACCAAATTTCACT +
Preference number: 5 (lower is better)
Translates to: VVHWDTLLRGISKTG*SPMSKESSCPPNFT
Trigger: AGTGAAATTTGGTGGGCAGCTGCTTTCCTTTGACATTGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000526696.6
ENST00000529002.2
CDS CCA 90 bp TTTTGGTGGAATTCCAGTGTCACCTCATTCTTGCCTGTGGTGCACTaGGACACATTGCTGAGGGGTATCTCAAAGACTGGCTGGTCACCA +
Preference number: 5 (lower is better)
Translates to: FWWNSSVTSFLPVVH*DTLLRGISKTGWSP
Trigger: TGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGACACTGGAATTCCACCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CCA 90 bp GCTCATTCCCATTCTCTCCTCATCCAACTACGAACCAGCCCCAACTaGCACATTCAGGGCGGTATGGCCATAGATCCCACTATACTTTTC +
Preference number: 5 (lower is better)
Translates to: AHSHSLLIQLRTSPN*HIQGGMAIDPTILF
Trigger: GAAAAGTATAGTGGGATCTATGGCCATACCGCCCTGAATGTGCCAGTTGGGGCTGGTTCGTAGTTGGATGAGGAGAGAATGGGAATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS-3UTR CAA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAAGAAATGTCCTCGTCCTaGGAGAAGAGGAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: HCPSDIHTNRRACSDGTEEMSSS*EKRRIR
Trigger: CCTGATCCTCCTCTTCTCCAAGGACGAGGACATTTC...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS CCA 90 bp CTTCTTCCTCGTTCATGTTCAGAGTCAACGAAATGTCCTCGTCCTTaGAGAAGAGGAGGATCAGGAAGTGGTAGCGAGTTTGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: LLPRSCSESTKCPRP*RRGGSGSGSEFGLA
Trigger: AGCAAGGCCAAACTCGCTACCACTTCCTGATCCTCCTCTTCTCCAAGGACGAGGACATTTCGTTGACTCTGAACATGAACGAGGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS-3UTR CAA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCTGGATGTTGTCCACTTaGCCTGTCTTGCTATTCTTG +
Preference number: 5 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGWMLST*PVLLFL
Trigger: CAAGAATAGCAAGACAGGCAAAGTGGACAACATCCA...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp ATACAAAATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCAGTGCACTGGGACACATaGCTGAGGGGTATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: IQNESRNRPQVGATGLASVHWDT*LRGISK
Trigger: CTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCAC...TGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAACTCTGCGTCATCGTTTaGGTGGAATTCCAGTGTCAC +
Preference number: 5 (lower is better)
Translates to: HCPSDIHTNRRACSDGTELCVIV*VEFQCH
Trigger: GTGACACTGGAATTCCACCAAAACGATGACGCAGAG...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACACCTCGGTTTTTGATGTaGAGCTTTTTCGCGTTGACA +
Preference number: 5 (lower is better)
Translates to: PHCPSDIHTNRRACSDGTPRFLM*SFFALT
Trigger: TGTCAACGCGAAAAAGCTCAACATCAAAAACCGAGG...TGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CAGGGACTGCATTTCATGAGGAGAAACTGGTACCAAAATATGGGTGGGGAGTCGGCCATCTTGGCCTTTTaGAGCTGTTTCCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGLHFMRRNWYQNMGGESAILAF*SCFRFF
Trigger: GAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGGC...CGACTCCCCACCCATATTTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CAGGGACTGCATTTCATGAGGAGAAACTGGTACCAAAATATGGGTGGGGAGTCGGTACCACGAGCAAAGTaGACAAAGGAGATCTCATCG +
Preference number: 5 (lower is better)
Translates to: QGLHFMRRNWYQNMGGESVPRAK*TKEISS
Trigger: CGATGAGATCTCCTTTGTCAACTTTGCTCGTGGTAC...CGACTCCCCACCCATATTTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CAGGGACTGCATTTCATGAGGAGAAACTGGTACCAAAATATGGGTGGGGAGTCGTCCTCTTCACCTGGGTaGAATGACTCATCGGTTTCT +
Preference number: 5 (lower is better)
Translates to: QGLHFMRRNWYQNMGGESSSSPG*NDSSVS
Trigger: AGAAACCGATGAGTCATTCAACCCAGGTGAAGAGGA...CGACTCCCCACCCATATTTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CAGGGACTGCATTTCATGAGGAGAAACTGGTACCAAAATATGGGTGGGGAGTCGCTCTTCTTTTTGCTCTaGTTCTCTCCCGAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: QGLHFMRRNWYQNMGGESLFFLL*FSPEEL
Trigger: GAGCTCTTCGGGAGAGAACAAGAGCAAAAAGAAGAG...CGACTCCCCACCCATATTTTGGTACCAGTTTCTCCTCATGAAATGCAGTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp GACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATCCAGGGACTGCTATAAACAGCCATCCTaGGGAAGCAGCAGAGTTAAG +
Preference number: 5 (lower is better)
Translates to: DIHTNRRACSDGTESRDCYKQPS*GSSRVK
Trigger: CTTAACTCTGCTGCTTCCCAAGGATGGCTGTTTATA...GCAGTCCCTGGATTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp ATGTTGTCCACTTTGCCTGTCTTGCTATTCTTGAAGATGATGCCCTaGCGGCTCAACCTCAGTCGACCATCATTCATGGAACCTTTCACC +
Preference number: 5 (lower is better)
Translates to: MLSTLPVLLFLKMMP*RLNLSRPSFMEPFT
Trigger: GGTGAAAGGTTCCATGAATGATGGTCGACTGAGGTTGAGCCGTCAGGGCATCATCTTCAAGAATAGCAAGACAGGCAAAGTGGACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS-3UTR CAA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACTCCACTTTGCCTGTCTaGCTATTCTTGAAGATGATG +
Preference number: 5 (lower is better)
Translates to: NESRNRPQVGATGLASHDSTLPV*LFLKMM
Trigger: CATCATCTTCAAGAATAGCAAGACAGGCAAAGTGGA...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp AATGAAAGTAGAAATAGGCCCCAGGTAGGAGCTACAGGCCTGGCCTCACATGACTTCAATCCTCGGTTTTaGATGTTGAGCTTTTTCGCG +
Preference number: 5 (lower is better)
Translates to: NESRNRPQVGATGLASHDFNPRF*MLSFFA
Trigger: CGCGAAAAAGCTCAACATCAAAAACCGAGGATTGAA...GTCATGTGAGGCCAGGCCTGTAGCTCCTACCTGGGGCCTATTTCTACTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp CAGGGGTACTACTGCATTTCTACTGATGAGGAAATTGAGATTCAATaGCTTACTCGACAACCCCCAGCAAGTAAGTGGCAAGCACCAGCT +
Preference number: 5 (lower is better)
Translates to: QGYYCISTDEEIEIQ*LTRQPPASKWQAPA
Trigger: AGCTGGTGCTTGCCACTTACTTGCTGGGGGTTGTCGAGTAAGTCATTGAATCTCAATTTCCTCATCAGTAGAAATGCAGTAGTACCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS-3UTR CAA 90 bp TCTCCCCACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCTTGAGCTTTTTCGCGTaGACAAAATCAAACAGTTTC +
Preference number: 5 (lower is better)
Translates to: SPHCPSDIHTNRRACSDGLSFFA*TKSNSF
Trigger: GAAACTGTTTGATTTTGTCAACGCGAAAAAGCTCAA...GCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTGGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS-3UTR CAA 90 bp CACTGCCCTAGTGACATACACACCAACAGGAGAGCATGTTCAGATGGCACAGAATTCTTCTTCTTTGACTaGTCCCTCTTAGAAGACTCG +
Preference number: 5 (lower is better)
Translates to: HCPSDIHTNRRACSDGTEFFFFD*SLLEDS
Trigger: CGAGTCTTCTAAGAGGGACAAGTCAAAGAAGAAGAA...TTCTGTGCCATCTGAACATGCTCTCCTGTTGGTGTGTATGTCACTAGGGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp CGTGGATTTCTTTTCCATCTTTACCTTTACTTTCTTCTTCTTCTTTaGCTTGTCCCTGTATTGGCAAGAGGGAAGAGGAGCTGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RGFLFHLYLYFLLLL*LVPVLARGKRSWAF
Trigger: GAAGGCCCAGCTCCTCTTCCCTCTTGCCAATACAGGGACAAGTCAAAGAAGAAGAAGAAAGTAAAGGTAAAGATGGAAAAGAAATCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 90 bp CGTGGATTTCTTTTCCATCTTTACCTTTACTTTCTTCTTCTTCTTTaGCTTGTCCCTCTTAGAAGACTCGCCTCGGCCCCCTTCATATTC +
Preference number: 5 (lower is better)
Translates to: RGFLFHLYLYFLLLL*LVPLRRLASAPFIF
Trigger: GAATATGAAGGGGGCCGAGGCGAGTCTTCTAAGAGGGACAAGTCAAAGAAGAAGAAGAAAGTAAAGGTAAAGATGGAAAAGAAATCCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS TCA 90 bp AGAGGAAAACCAACTTCAGTCCAACCCAGTGCCTACCCCTGTAATTaGCAGTCTTGTCTGATATATGTGAAACTCCTCAAACAATGCAAC +
Preference number: 5 (lower is better)
Translates to: RGKPTSVQPSAYPCN*QSCLIYVKLLKQCN
Trigger: GTTGCATTGTTTGAGGAGTTTCACATATATCAGACAAGACTGTCAATTACAGGGGTAGGCACTGGGTTGGACTGAAGTTGGTTTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 90 bp ATATATGTGAAACTCCTCAAACAATGCAACTACCTTACACCTGTATaGTGCTGGACAGTCTTCAAGGCACTTTCACAAGTATTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: IYVKLLKQCNYLTPV*CWTVFKALSQVFAH
Trigger: ATGAGCAAATACTTGTGAAAGTGCCTTGAAGACTGTCCAGCAGCATACAGGTGTAAGGTAGTTGCATTGTTTGAGGAGTTTCACATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp TGGGACCGGGGACGACCACCACCTACCTCCTCAGGCTaGGGCCTCGCGAGGGCCCCGGCGCGAGAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: WDRGRPPPTSSG*GLARAPAREVG
Trigger: GCCCACCTCTCGCGCCGGGGCCCTCGCGAGGCCGCAGCCTGAGGAGGTAGGTGGTGGTCGTCCCCGGTCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 72 bp CCAGGCCTGGGTGGAGAACCGGGCCCGGAATACCGCTaGCACCCAACCCGACGCCCGCTCTGGCCGCTCCGG +
Preference number: 6 (lower is better)
Translates to: PGLGGEPGPEYR*HPTRRPLWPLR
Trigger: CCGGAGCGGCCAGAGCGGGCGTCGGGTTGGGTGTCAGCGGTATTCCGGGCCCGGTTCTCCACCCAGGCCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293880.9
ENST00000526696.6
CDS CCA 72 bp CGGACGCTGCAGTGCCCGAGGGTCCAGGTCCAGGCCTaGGTGGAGAACCGGGCCCGGAATACCGCTGACACC +
Preference number: 6 (lower is better)
Translates to: RTLQCPRVQVQA*VENRARNTADT
Trigger: GGTGTCAGCGGTATTCCGGGCCCGGTTCTCCACCCAGGCCTGGACCTGGACCCTCGGGCACTGCAGCGTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293880.9
ENST00000526696.6
CDS GCA 72 bp GCCCGCACATCGCACGCGACCCAATCCAGCTCAGAGTaGAGGGTTTCCCTCGCACCGCTCCCACCACCCCGC +
Preference number: 6 (lower is better)
Translates to: ARTSHATQSSSE*RVSLAPLPPPR
Trigger: GCGGGGTGGTGGGAGCGGTGCGAGGGAAACCCTGCACTCTGAGCTGGATTGGGTCGCGTGCGATGTGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp GGGAGCCATGGCAACGAGCAGCGGAACCCCAGGGTCTaGCAGGAGCCCGCACATCGCACGCGACCCAATCCA +
Preference number: 6 (lower is better)
Translates to: GSHGNEQRNPRV*QEPAHRTRPNP
Trigger: TGGATTGGGTCGCGTGCGATGTGCGGGCTCCTGGCAGACCCTGGGGTTCCGCTGCTCGTTGCCATGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp GGGAGCTGGGCCCCAACTCCTGAGTGGGTGTGCGGATaGTCAGCAGGTTGGGAATCTCCTCAGGCTGCGGCC +
Preference number: 6 (lower is better)
Translates to: GSWAPTPEWVCG*SAGWESPQAAA
Trigger: GGCCGCAGCCTGAGGAGATTCCCAACCTGCTGAGCATCCGCACACCCACTCAGGAGTTGGGGCCCAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278412.7
CDS GCA 72 bp CCGCCCCACATAATGGATTCGCCCGCTCCCCGCGGTTaGGAACGCGGAATGGTCCATGTCGAGGGTCCCGTG +
Preference number: 6 (lower is better)
Translates to: PPHIMDSPAPRG*ERGMVHVEGPV
Trigger: CACGGGACCCTCGACATGGACCATTCCGCGTTCGCAACCGCGGGGAGCGGGCGAATCCATTATGTGGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 72 bp CCCGCCCCACATAATGGATTCGCCCGCTCCCCGCGGTaGCGAACGCGGAATGGTCCATGTCGAGGGTCCCGT +
Preference number: 6 (lower is better)
Translates to: PAPHNGFARSPR*RTRNGPCRGSR
Trigger: ACGGGACCCTCGACATGGACCATTCCGCGTTCGCAACCGCGGGGAGCGGGCGAATCCATTATGTGGGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 72 bp CGAAGCGGATGTGCACAGGTGGCTTGTGGACGTAGATaGAGCCCCGCTCCAGCGGGTAGAGCAGTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: RSGCAQVACGRR*SPAPAGRAVLS
Trigger: GCTCAGGACTGCTCTACCCGCTGGAGCGGGGCTTCATCTACGTCCACAAGCCACCTGTGCACATCCGCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS GCA 72 bp TGCTCCCAGGCCAGCCAATGCCTGCTCAGCACCATCTaGTGCCAAGGCAACCAGGGGAAGCCTCACCTCAAC +
Preference number: 6 (lower is better)
Translates to: CSQASQCLLSTI*CQGNQGKPHLN
Trigger: GTTGAGGTGAGGCTTCCCCTGGTTGCCTTGGCAGCAGATGGTGCTGAGCAGGCATTGGCTGGCCTGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp GGCCTCAACAGGGTCCACACCATCCTCCTGGGTGGGTaGGACGTAGAAGCGCACCTCCATGAGAGACACCTC +
Preference number: 6 (lower is better)
Translates to: GLNRVHTILLGG*DVEAHLHERHL
Trigger: GAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGATGGTGTGGACCCTGTTGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000526696.6
ENST00000529002.2
CDS GCA 72 bp CACCTCCTGATAGACGTCGTTGAACTCCAGTGTCTCTaGCATGTCGACCCCTGCCTGTGGTGGCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: HLLIDVVELQCL*HVDPCLWWPGQ
Trigger: CTGCCCAGGCCACCACAGGCAGGGGTCGACATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS GCA 72 bp ACTCCCAGCTGCGCCTGGATGTCTCAGGATTTCCTCTaGCTGGAAACCTACAGACGGACGCTGCAGTGCCCG +
Preference number: 6 (lower is better)
Translates to: TPSCAWMSQDFL*LETYRRTLQCP
Trigger: CGGGCACTGCAGCGTCCGTCTGTAGGTTTCCAGGCAGAGGAAATCCTGAGACATCCAGGCGCAGCTGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293880.9
ENST00000526696.6
CDS CCA 72 bp CACCTCAACAGGGTCCACACCATCCTCCTGGGTGGGTaGGACGTAGAAGCGCACCTCCATGAGAGACACCTC +
Preference number: 6 (lower is better)
Translates to: HLNRVHTILLGG*DVEAHLHERHL
Trigger: GAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGATGGTGTGGACCCTGTTGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp GACCACGAGGAGTCAGACACTGCAGCTCCCGGAAGATaGAGATGGCATCTCCCGTGGCCTGGATTACATCCG +
Preference number: 6 (lower is better)
Translates to: DHEESDTAAPGR*RWHLPWPGLHP
Trigger: CGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACTCCTCGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
CDS CCA 72 bp GGCTTACCCCAACCACAGGCTCTAAGGGTGGGCACTTaGCCTATTTCTGGCCCATCAGACCCCAGCCCATTC +
Preference number: 6 (lower is better)
Translates to: GLPQPQALRVGT*PISGPSDPSPF
Trigger: GAATGGGCTGGGGTCTGATGGGCCAGAAATAGGCCAAGTGCCCACCCTTAGAGCCTGTGGTTGGGGTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 72 bp GGGCTTACCCCAACCACAGGCTCTAAGGGTGGGCACTaGGCCTATTTCTGGCCCATCAGACCCCAGCCCATT +
Preference number: 6 (lower is better)
Translates to: GLTPTTGSKGGH*AYFWPIRPQPI
Trigger: AATGGGCTGGGGTCTGATGGGCCAGAAATAGGCCAAGTGCCCACCCTTAGAGCCTGTGGTTGGGGTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp GCCTGTCAAGTCAGAGCAGCAGCTCCCAGAAGACCTGGGGCTGGATaGTCCACACACAGCCAACGTGCAGGGCCTATGCCCAAGTACTTC +
Preference number: 6 (lower is better)
Translates to: ACQVRAAAPRRPGAG*STHSQRAGPMPKYF
Trigger: GAAGTACTTGGGCATAGGCCCTGCACGTTGGCTGTGTGTGGACAATCCAGCCCCAGGTCTTCTGGGAGCTGCTGCTCTGACTTGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp TCTCGGCTGGCATTGAGCCACAGCATGTATGCAGACATGGGCCTCTaGGGGGCATTGGGGTCTTTGCCCTTCTTCACCTCCACAGGCTTC +
Preference number: 6 (lower is better)
Translates to: SRLALSHSMYADMGL*GALGSLPFFTSTGF
Trigger: GAAGCCTGTGGAGGTGAAGAAGGGCAAAGACCCCAATGCCCCCAAGAGGCCCATGTCTGCATACATGCTGTGGCTCAATGCCAGCCGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS GCA 72 bp GGGAGCTGGGCCCCAACTCCTGAGTGGGTGTGCGGATaGTCAGCAGGTTGGGAATCTGAATTCAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: GSWAPTPEWVCG*SAGWESEFKRK
Trigger: CTTCCTCTTGAATTCAGATTCCCAACCTGCTGAGCATCCGCACACCCACTCAGGAGTTGGGGCCCAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp AAGACCTGGGGCTGGATTGTCCACACACAGCCAACGTaGAGGGCCTATGCCCAAGTACTTCCTGCCAACTGG +
Preference number: 6 (lower is better)
Translates to: KTWGWIVHTQPT*RAYAQVLPANW
Trigger: CCAGTTGGCAGGAAGTACTTGGGCATAGGCCCTGCACGTTGGCTGTGTGTGGACAATCCAGCCCCAGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp GAGGAGTCAGACACTGCAGCTCCCGGAAGATGCAGATaGCATCTCCCGTGGCCTGGATTACATCCGCCTTTG +
Preference number: 6 (lower is better)
Translates to: EESDTAAPGRCR*HLPWPGLHPPL
Trigger: CAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
CDS CCA 72 bp GACAAAGGAGATCTCATCGAAGCGGATGTGCACAGGTaGCTTGTGGACGTAGATGAAGCCCCGCTCCAGCGG +
Preference number: 6 (lower is better)
Translates to: DKGDLIEADVHR*LVDVDEAPLQR
Trigger: CCGCTGGAGCGGGGCTTCATCTACGTCCACAAGCCACCTGTGCACATCCGCTTCGATGAGATCTCCTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CCA 72 bp CACGGATGGAGCCAGGTAGCAACTCCCAGCTGCGCCTaGATGTCTCAGGATTTCCTCTGCCTGGAAACCTAC +
Preference number: 6 (lower is better)
Translates to: HGWSQVATPSCA*MSQDFLCLETY
Trigger: GTAGGTTTCCAGGCAGAGGAAATCCTGAGACATCCAGGCGCAGCTGGGAGTTGCTACCTGGCTCCATCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293880.9
ENST00000526696.6
CDS CCA 72 bp CCAATCCCCAACACTGCTTTCTCCCATTCACTGTGGTaGCTTCAGCCATGCCCTCTCCAGACCCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: PIPNTAFSHSLW*LQPCPLQTQPQ
Trigger: CTGTGGCTGGGTCTGGAGAGGGCATGGCTGAAGCCACCACAGTGAATGGGAGAAAGCAGTGTTGGGGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp TCCCGGTCACTGTCACCCTCATTACTGGAGGAGCTGGCAGAGGCGTaGCTGTCAAACCTGCCAGAGAACAAGCCAGGCTTAGACTTGAGG +
Preference number: 6 (lower is better)
Translates to: SRSLSPSLLEELAEA*LSNLPENKPGLDLR
Trigger: CCTCAAGTCTAAGCCTGGCTTGTTCTCTGGCAGGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 72 bp CCTCCTGGGTGGGTGGGACGTAGAAGCGCACCTCCATaGGAGACACCTCTGCGTCATCGTTTTGGTGGAATT +
Preference number: 6 (lower is better)
Translates to: PPGWVGRRSAPP*ETPLRHRFGGI
Trigger: AATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CCA 72 bp CATCCCGGTCACTGTCACCCTCATTACTGGAGGAGCTaGCAGAGGCGTTGCTGTCAAACTCCTCTGCCACAT +
Preference number: 6 (lower is better)
Translates to: HPGHCHPHYWRS*QRRCCQTPLPH
Trigger: ATGTGGCAGAGGAGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000635721.1
CDS CCA 72 bp CATCCCGGTCACTGTCACCCTCATTACTGGAGGAGCTaGCAGAGGCGTTGCTGTCAAACCTGCCAGAGAACA +
Preference number: 6 (lower is better)
Translates to: HPGHCHPHYWRS*QRRCCQTCQRT
Trigger: TGTTCTCTGGCAGGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp GCTTCTTCTCATCCCGGTCACTGTCACCCTCATTACTaGAGGAGCTGGCAGAGGCGTTGCTGTCAAACCTGC +
Preference number: 6 (lower is better)
Translates to: ASSHPGHCHPHY*RSWQRRCCQTC
Trigger: GCAGGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 72 bp CCTGAGTGCCCTTGGAAGTTGCCTGGCACTGTGATCTaGCGGTTTACCAGTGCTTTCATGACCCGGCTGACC +
Preference number: 6 (lower is better)
Translates to: PECPWKLPGTVI*RFTSAFMTRLT
Trigger: GGTCAGCCGGGTCATGAAAGCACTGGTAAACCGCAAGATCACAGTGCCAGGCAACTTCCAAGGGCACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CAA 72 bp GCATTGAGCCACAGCATGTATGCAGACATGGGCCTCTaGGGGGCATTGGGGTCTTTGCCCTTCTTCACCTCC +
Preference number: 6 (lower is better)
Translates to: ALSHSMYADMGL*GALGSLPFFTS
Trigger: GGAGGTGAAGAAGGGCAAAGACCCCAATGCCCCCAAGAGGCCCATGTCTGCATACATGCTGTGGCTCAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 90 bp ACAGGCTTCTTGCGGCTCTTGCGGTCCTTGGCCATCTTGGCCTTTTaGAGCTGTTTCCGCTTCTTCTCATCCCGGTCACTGTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: TGFLRLLRSLAILAF*SCFRFFSSRSLSPS
Trigger: TGAGGGTGACAGTGACCGGGATGAGAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 90 bp TTCACCTCCACAGGCTTCTTGCGGCTCTTGCGGTCCTTGGCCATCTaGGCCTTTTTGAGCTGTTTCCGCTTCTTCTCATCCCGGTCACTG +
Preference number: 6 (lower is better)
Translates to: FTSTGFLRLLRSLAI*AFLSCFRFFSSRSL
Trigger: CAGTGACCGGGATGAGAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTGTGGAGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS TCA 72 bp GATGGCATCTCCCGTGGCCTGGATTACATCCGCCTTTaGCAACACATTCTGGGCAAAGGCCTCAACAGGGTC +
Preference number: 6 (lower is better)
Translates to: DGISRGLDYIRL*QHILGKGLNRV
Trigger: GACCCTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000526696.6
CDS TCA 72 bp TGCGGCTCTTGCGGTCCTTGGCCATCTTGGCCTTTTTaGGCTGTTTCCGCTTCTTCTCATCCCGGTCACTGT +
Preference number: 6 (lower is better)
Translates to: CGSCGPWPSWPF*AVSASSHPGHC
Trigger: ACAGTGACCGGGATGAGAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS GCA 72 bp GATCTTCTCTCGGCTGGCATTGAGCCACAGCATGTATaGAGACATGGGCCTCTTGGGGGCATTGGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: DLLSAGIEPQHV*RHGPLGGIGVF
Trigger: AAAGACCCCAATGCCCCCAAGAGGCCCATGTCTGCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS GCA 72 bp GGAAGACAGATAAGCATGAAAGACAGCACCTCGCTGTaGTCACGGATGGAGCCAGGTAGCAACTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: GRQISMKDSTSL*SRMEPGSNSQL
Trigger: CAGCTGGGAGTTGCTACCTGGCTCCATCCGTGAGCACAGCGAGGTGCTGTCTTTCATGCTTATCTGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp CCTAGTCCATCCCCAGGACACCACTGGCAGAAACACTaGCTCATTCATGCCTGGAACATGGCCCAAATCCAC +
Preference number: 6 (lower is better)
Translates to: PSPSPGHHWQKH*LIHAWNMAQIH
Trigger: GTGGATTTGGGCCATGTTCCAGGCATGAATGAGGCAGTGTTTCTGCCAGTGGTGTCCTGGGGATGGACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp GCTTCTTCTCATCCCGGTCACTGTCACCCTCATTACTaGAGGAGCTGGCAGAGGCGTTGCTGTCAAACTCCT +
Preference number: 6 (lower is better)
Translates to: ASSHPGHCHPHY*RSWQRRCCQTP
Trigger: AGGAGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000635721.1
CDS CAA 72 bp TTCACCTCCACAGGCTTCTTGCGGCTCTTGCGGTCCTaGGCCATCTTGGCCTTTTTGAGCTGTTTCCGCTTC +
Preference number: 6 (lower is better)
Translates to: FTSTGFLRLLRS*AILAFLSCFRF
Trigger: GAAGCGGAAACAGCTCAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTGTGGAGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 72 bp CTGTCACCCTCATTACTGGAGGAGCTGGCAGAGGCGTaGCTGTCAAACCTGCCAGAGAACAAGCCAGGCTTA +
Preference number: 6 (lower is better)
Translates to: LSPSLLEELAEA*LSNLPENKPGL
Trigger: TAAGCCTGGCTTGTTCTCTGGCAGGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp TTGCCCTTCTTCACCTCCACAGGCTTCTTGCGGCTCTTGCGGTCCTaGGCCATCTTGGCCTTTTTGAGCTGTTTCCGCTTCTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: LPFFTSTGFLRLLRS*AILAFLSCFRFFSS
Trigger: GGATGAGAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTGTGGAGGTGAAGAAGGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 90 bp ATGCTGATGCCAGGATGGTCTGACTTGATCTTCTCTCGGCTGGCATaGAGCCACAGCATGTATGCAGACATGGGCCTCTTGGGGGCATTG +
Preference number: 6 (lower is better)
Translates to: MLMPGWSDLIFSRLA*SHSMYADMGLLGAL
Trigger: CAATGCCCCCAAGAGGCCCATGTCTGCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGCATCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 90 bp AGGCATCATGCTGGTCCTCATCAGAGTCAGCATATTCATCGTAGCTaGGGTTCATGCCCTAGCCAGGGAAGAGTTCACGGTGGGGCCAAC +
Preference number: 6 (lower is better)
Translates to: RHHAGPHQSQHIHRS*GSCPSQGRVHGGAN
Trigger: GTTGGCCCCACCGTGAACTCTTCCCTGGCTAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCTGATGAGGACCAGCATGATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp ACTCAGGAAGGGCTTACCCCAACCACAGGCTCTAAGGGTGGGCACTaGGCCTATTTCTGGCCCATCAGACCCCAGCCCATTCTAATAACT +
Preference number: 6 (lower is better)
Translates to: TQEGLTPTTGSKGGH*AYFWPIRPQPILIT
Trigger: AGTTATTAGAATGGGCTGGGGTCTGATGGGCCAGAAATAGGCCAAGTGCCCACCCTTAGAGCCTGTGGTTGGGGTAAGCCCTTCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 72 bp CTGCGTCAGCCTGGAGGGCACCAAGGGAGAGTATCATaGGTACACCAGAAGAATCAGAGGGCACAGCCTAAA +
Preference number: 6 (lower is better)
Translates to: LRQPGGHQGRVS*VHQKNQRAQPK
Trigger: TTTAGGCTGTGCCCTCTGATTCTTCTGGTGTACTCATGATACTCTCCCTTGGTGCCCTCCAGGCTGACGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp TGGGACGTAGAAGCGCACCTCCATGAGAGACACCTCTaGGTCATCGTTTTGGTGGAATTCCAGTGTCACCTC +
Preference number: 6 (lower is better)
Translates to: WDVEAHLHERHL*VIVLVEFQCHL
Trigger: GAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS GCA 72 bp CATCAGAGTCAGCATATTCATCGTAGCTTGGGTTCATaGCCTAGCCAGGGAAGAGTTCACGGTGGGGCCAAC +
Preference number: 6 (lower is better)
Translates to: HQSQHIHRSLGS*PSQGRVHGGAN
Trigger: GTTGGCCCCACCGTGAACTCTTCCCTGGCTAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp CATTCTCTCCTCATCCAACTACGAACCAGCCCCAACTaGCACATTCAGGGCGGTATGGCCATAGATCCCACT +
Preference number: 6 (lower is better)
Translates to: HSLLIQLRTSPN*HIQGGMAIDPT
Trigger: AGTGGGATCTATGGCCATACCGCCCTGAATGTGCCAGTTGGGGCTGGTTCGTAGTTGGATGAGGAGAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp ACCACAGGCTCTAAGGGTGGGCACTTGGCCTATTTCTaGCCCATCAGACCCCAGCCCATTCTAATAACTCAG +
Preference number: 6 (lower is better)
Translates to: TTGSKGGHLAYF*PIRPQPILITQ
Trigger: CTGAGTTATTAGAATGGGCTGGGGTCTGATGGGCCAGAAATAGGCCAAGTGCCCACCCTTAGAGCCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 72 bp GTCACCTCATTCTTGCCTGTGGTGCACTGGGACACATaGCTGAGGGGTATCTCAAAGACTGGCTGGTCACCA +
Preference number: 6 (lower is better)
Translates to: VTSFLPVVHWDT*LRGISKTGWSP
Trigger: TGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CAA 72 bp AGATGGCATCTCCCGTGGCCTGGATTACATCCGCCTTaGACAACACATTCTGGGCAAAGGCCTCAACAGGGT +
Preference number: 6 (lower is better)
Translates to: RWHLPWPGLHPP*TTHSGQRPQQG
Trigger: ACCCTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000526696.6
CDS CAA 72 bp ACAGGCTTCTTGCGGCTCTTGCGGTCCTTGGCCATCTaGGCCTTTTTGAGCTGTTTCCGCTTCTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: TGFLRLLRSLAI*AFLSCFRFFSS
Trigger: GGATGAGAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 72 bp CCAGGATGGTCTGACTTGATCTTCTCTCGGCTGGCATaGAGCCACAGCATGTATGCAGACATGGGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: PGWSDLIFSRLA*SHSMYADMGLL
Trigger: CAAGAGGCCCATGTCTGCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 90 bp GACGTAGAAGCGCACCTCCATGAGAGACACCTCTGCGTCATCGTTTaGGTGGAATTCCAGTGTCACCTCATTCTTGCCTGTGGTGCACTG +
Preference number: 6 (lower is better)
Translates to: DVEAHLHERHLCVIV*VEFQCHLILACGAL
Trigger: CAGTGCACCACAGGCAAGAATGAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS TCA 72 bp CATTCATGGAACCTTTCACCTCCTGATAGACGTCGTTaGACTCCAGTGTCTCTGCCATGTCGACCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: HSWNLSPPDRRR*TPVSLPCRPLP
Trigger: AGGCAGGGGTCGACATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTGAAAGGTTCCATGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS TCA 72 bp TTTCATGACCCGGCTGACCATCTCATAGAGGGATCCTaGCATGTTCTTGGTGAGCCGACCCTCAAAGCGCTT +
Preference number: 6 (lower is better)
Translates to: FHDPADHLIEGS*HVLGEPTLKAL
Trigger: AAGCGCTTTGAGGGTCGGCTCACCAAGAACATGTCAGGATCCCTCTATGAGATGGTCAGCCGGGTCATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS TCA 72 bp GTGTCACCCATACTTGGGCAATGGCCTACCCAGGTTTaGGAAGCACTACCCTACTGCAGTCAGAAGCATCTC +
Preference number: 6 (lower is better)
Translates to: VSPILGQWPTQV*EALPYCSQKHL
Trigger: GAGATGCTTCTGACTGCAGTAGGGTAGTGCTTCTCAAACCTGGGTAGGCCATTGCCCAAGTATGGGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp GAAGTTGCCTGGCACTGTGATCTTGCGGTTTACCAGTaGTTTCATGACCCGGCTGACCATCTCATAGAGGGA +
Preference number: 6 (lower is better)
Translates to: EVAWHCDLAVYQ*FHDPADHLIEG
Trigger: TCCCTCTATGAGATGGTCAGCCGGGTCATGAAAGCACTGGTAAACCGCAAGATCACAGTGCCAGGCAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS GCA 72 bp CATCGCTGCTGTCATTGGCATTCTCCTCCCGGATCTTaGCTTCCTCCTTCATCCTCTCCAAGTAGGCATCAT +
Preference number: 6 (lower is better)
Translates to: HRCCHWHSPPGS*LPPSSSPSRHH
Trigger: ATGATGCCTACTTGGAGAGGATGAAGGAGGAAGGCAAGATCCGGGAGGAGAATGCCAATGACAGCAGCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CCA 72 bp TGGGACACATTGCTGAGGGGTATCTCAAAGACTGGCTaGTCACCAATGTCAAAGGAAAGCAGCTGCCCACCA +
Preference number: 6 (lower is better)
Translates to: WDTLLRGISKTG*SPMSKESSCPP
Trigger: TGGTGGGCAGCTGCTTTCCTTTGACATTGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000526696.6
ENST00000529002.2
CDS CCA 72 bp CGCACCTCCATGAGAGACACCTCTGCGTCATCGTTTTaGTGGAATTCCAGTGTCACCTCATTCTTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: RTSMRDTSASSF*WNSSVTSFLPV
Trigger: CACAGGCAAGAATGAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CCA 72 bp GATCAGGAAGTGGTAGCGAGTTTGGCCTTGCTTGATTaGGGGATCCAGGCTGATCACAAAGAACATCTGGCG +
Preference number: 6 (lower is better)
Translates to: DQEVVASLALLD*GIQADHKEHLA
Trigger: CGCCAGATGTTCTTTGTGATCAGCCTGGATCCCCCAATCAAGCAAGGCCAAACTCGCTACCACTTCCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CCA 72 bp CATCGGTTTCTTCTCCTGAGTCATCGCTGCTGTCATTaGCATTCTCCTCCCGGATCTTGCCTTCCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: HRFLLLSHRCCH*HSPPGSCLPPS
Trigger: TGAAGGAGGAAGGCAAGATCCGGGAGGAGAATGCCAATGACAGCAGCGATGACTCAGGAGAAGAAACCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CCA 72 bp GCCTTCTTGGAAAGATCCGTGATGCTGATGCCAGGATaGTCTGACTTGATCTTCTCTCGGCTGGCATTGAGC +
Preference number: 6 (lower is better)
Translates to: AFLERSVMLMPG*SDLIFSRLALS
Trigger: GCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGCATCAGCATCACGGATCTTTCCAAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CCA 72 bp TCTACTCATCGGATCCTGACGCTGAGTCCTCTGAGCTaGGGGGAGTACTGGCTAGTTCTTCTTCTTCAGAGT +
Preference number: 6 (lower is better)
Translates to: STHRILTLSPLS*GEYWLVLLLQS
Trigger: ACTCTGAAGAAGAAGAACTAGCCAGTACTCCCCCCAGCTCAGAGGACTCAGCGTCAGGATCCGATGAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CCA 72 bp CTGGTCCTCATCAGAGTCAGCATATTCATCGTAGCTTaGGTTCATGCCCTAGCCAGGGAAGAGTTCACGGTG +
Preference number: 6 (lower is better)
Translates to: LVLIRVSIFIVA*VHALAREEFTV
Trigger: CACCGTGAACTCTTCCCTGGCTAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCTGATGAGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 72 bp GCGCACCTCCATGAGAGACACCTCTGCGTCATCGTTTaGGTGGAATTCCAGTGTCACCTCATTCTTGCCTGT +
Preference number: 6 (lower is better)
Translates to: AHLHERHLCVIV*VEFQCHLILAC
Trigger: ACAGGCAAGAATGAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CAA 72 bp GAAAGATCCGTGATGCTGATGCCAGGATGGTCTGACTaGATCTTCTCTCGGCTGGCATTGAGCCACAGCATG +
Preference number: 6 (lower is better)
Translates to: ERSVMLMPGWSD*IFSRLALSHSM
Trigger: CATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGCATCAGCATCACGGATCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 72 bp CTCTTGAAGCTCTCGCTTAGCTGCCTTGAGGACGACTaGGATGATGAGCCCCTAGAGGGCGTGGATTTCTTT +
Preference number: 6 (lower is better)
Translates to: LLKLSLSCLEDD*DDEPLEGVDFF
Trigger: AAAGAAATCCACGCCCTCTAGGGGCTCATCATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CAA 72 bp GCTGGTCCTCATCAGAGTCAGCATATTCATCGTAGCTaGGGTTCATGCCCTAGCCAGGGAAGAGTTCACGGT +
Preference number: 6 (lower is better)
Translates to: AGPHQSQHIHRS*GSCPSQGRVHG
Trigger: ACCGTGAACTCTTCCCTGGCTAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCTGATGAGGACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp GCCTTCTTGGAAAGATCCGTGATGCTGATGCCAGGATGGTCTGACTaGATCTTCTCTCGGCTGGCATTGAGCCACAGCATGTATGCAGAC +
Preference number: 6 (lower is better)
Translates to: AFLERSVMLMPGWSD*IFSRLALSHSMYAD
Trigger: GTCTGCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGCATCAGCATCACGGATCTTTCCAAGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 90 bp ACCTCTGCGTCATCGTTTTGGTGGAATTCCAGTGTCACCTCATTCTaGCCTGTGGTGCACTGGGACACATTGCTGAGGGGTATCTCAAAG +
Preference number: 6 (lower is better)
Translates to: TSASSFWWNSSVTSF*PVVHWDTLLRGISK
Trigger: CTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CAA 90 bp ATGCCCTATTGTGTCACCCATACTTGGGCAATGGCCTACCCAGGTTaGAGAAGCACTACCCTACTGCAGTCAGAAGCATCTCTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: MPYCVTHTWAMAYPG*RSTTLLQSEASLLS
Trigger: AGACAGCAGAGATGCTTCTGACTGCAGTAGGGTAGTGCTTCTCAAACCTGGGTAGGCCATTGCCCAAGTATGGGTGACACAATAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp GTACTGTGGTGTAGGGGATCTTGTAGTCAAAGGTCTTaGCATGCAGGTGCAGAAAGGTGGGGTAGATCCGAA +
Preference number: 6 (lower is better)
Translates to: VLWCRGSCSQRS*HAGAERWGRSE
Trigger: TTCGGATCTACCCCACCTTTCTGCACCTGCATGGCAAGACCTTTGACTACAAGATCCCCTACACCACAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
CDS CCA 72 bp AATTCCAGTGTCACCTCATTCTTGCCTGTGGTGCACTaGGACACATTGCTGAGGGGTATCTCAAAGACTGGC +
Preference number: 6 (lower is better)
Translates to: NSSVTSFLPVVH*DTLLRGISKTG
Trigger: GCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGACACTGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CCA 72 bp ACCTCCATGAGAGACACCTCTGCGTCATCGTTTTGGTaGAATTCCAGTGTCACCTCATTCTTGCCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: TSMRDTSASSFW*NSSVTSFLPVV
Trigger: CACCACAGGCAAGAATGAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CAA 72 bp TCCAGGCTGATCACAAAGAACATCTGGCGCTGGTCCTaGTGGGGTAACAAAAACAGACGCAGTACTGTGGTG +
Preference number: 6 (lower is better)
Translates to: SRLITKNIWRWS*WGNKNRRSTVV
Trigger: CACCACAGTACTGCGTCTGTTTTTGTTACCCCACAAGGACCAGCGCCAGATGTTCTTTGTGATCAGCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
CDS CAA 72 bp GAAGAGGAGGATCAGGAAGTGGTAGCGAGTTTGGCCTaGCTTGATTGGGGGATCCAGGCTGATCACAAAGAA +
Preference number: 6 (lower is better)
Translates to: EEEDQEVVASLA*LDWGIQADHKE
Trigger: TTCTTTGTGATCAGCCTGGATCCCCCAATCAAGCAAGGCCAAACTCGCTACCACTTCCTGATCCTCCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CAA 72 bp TCTTTGGACATTCCCTTCCAGATCTCGCCTGCCTTCTaGGAAAGATCCGTGATGCTGATGCCAGGATGGTCT +
Preference number: 6 (lower is better)
Translates to: SLDIPFQISPAF*ERSVMLMPGWS
Trigger: AGACCATCCTGGCATCAGCATCACGGATCTTTCCAAGAAGGCAGGCGAGATCTGGAAGGGAATGTCCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 72 bp CCTTCTGGATTAAGAGAGCAGAGTCCCAATTTTCTGTaGGGAACCACCTTGCCCCCACTCAGGAAGGGCTTA +
Preference number: 6 (lower is better)
Translates to: PSGLREQSPNFL*GTTLPPLRKGL
Trigger: TAAGCCCTTCCTGAGTGGGGGCAAGGTGGTTCCCAACAGAAAATTGGGACTCTGCTCTCTTAATCCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 72 bp TGTGTCACCCATACTTGGGCAATGGCCTACCCAGGTTaGAGAAGCACTACCCTACTGCAGTCAGAAGCATCT +
Preference number: 6 (lower is better)
Translates to: CVTHTWAMAYPG*RSTTLLQSEAS
Trigger: AGATGCTTCTGACTGCAGTAGGGTAGTGCTTCTCAAACCTGGGTAGGCCATTGCCCAAGTATGGGTGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 72 bp AAGAGGCCATATTTCCCCAGTGACTTGAATGCCCTATaGTGTCACCCATACTTGGGCAATGGCCTACCCAGG +
Preference number: 6 (lower is better)
Translates to: KRPYFPSDLNAL*CHPYLGNGLPR
Trigger: CCTGGGTAGGCCATTGCCCAAGTATGGGTGACACAATAGGGCATTCAAGTCACTGGGGAAATATGGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp AATTCCAGTGTCACCTCATTCTTGCCTGTGGTGCACTGGGACACATaGCTGAGGGGTATCTCAAAGACTGGCTGGTCACCAATGTCAAAG +
Preference number: 6 (lower is better)
Translates to: NSSVTSFLPVVHWDT*LRGISKTGWSPMSK
Trigger: CTTTGACATTGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGACACTGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000526696.6
ENST00000529002.2
CDS CAA 90 bp GTCCAGGAAAAGAGGCCATATTTCCCCAGTGACTTGAATGCCCTATaGTGTCACCCATACTTGGGCAATGGCCTACCCAGGTTTGAGAAG +
Preference number: 6 (lower is better)
Translates to: VQEKRPYFPSDLNAL*CHPYLGNGLPRFEK
Trigger: CTTCTCAAACCTGGGTAGGCCATTGCCCAAGTATGGGTGACACAATAGGGCATTCAAGTCACTGGGGAAATATGGCCTCTTTTCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp CCAACTCCTGAGTGGGTGTGCGGATGCTCAGCAGGTTaGGAATCTGAATTCAAGAGGAAGACAGATAAGCAT +
Preference number: 6 (lower is better)
Translates to: PTPEWVCGCSAG*ESEFKRKTDKH
Trigger: ATGCTTATCTGTCTTCCTCTTGAATTCAGATTCCCAACCTGCTGAGCATCCGCACACCCACTCAGGAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp TGGGTAATGTGTCAACATCGTAACAAGGCTGGAGGGTaGCACATTTCACACACGCACGTAACACCCAACCAT +
Preference number: 6 (lower is better)
Translates to: WVMCQHRNKAGG*HISHTHVTPNH
Trigger: ATGGTTGGGTGTTACGTGCGTGTGTGAAATGTGCCACCCTCCAGCCTTGTTACGATGTTGACACATTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 72 bp TCTCCCGAAGAGCTCTCATCACTAGACACAAACTCTTaGCTCTTGAAGCTCTCGCTTAGCTGCCTTGAGGAC +
Preference number: 6 (lower is better)
Translates to: SPEELSSLDTNS*LLKLSLSCLED
Trigger: GTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTTTGTGTCTAGTGATGAGAGCTCTTCGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CAA 90 bp TCTTTCTTCTCTTTGGACATTCCCTTCCAGATCTCGCCTGCCTTCTaGGAAAGATCCGTGATGCTGATGCCAGGATGGTCTGACTTGATC +
Preference number: 6 (lower is better)
Translates to: SFFSLDIPFQISPAF*ERSVMLMPGWSDLI
Trigger: GATCAAGTCAGACCATCCTGGCATCAGCATCACGGATCTTTCCAAGAAGGCAGGCGAGATCTGGAAGGGAATGTCCAAAGAGAAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278412.7
ENST00000293880.9
ENST00000635721.1
CDS CAA 90 bp AACTCTTTGCTCTTGAAGCTCTCGCTTAGCTGCCTTGAGGACGACTaGGATGATGAGCCCCTAGAGGGCGTGGATTTCTTTTCCATCTTT +
Preference number: 6 (lower is better)
Translates to: NSLLLKLSLSCLEDD*DDEPLEGVDFFSIF
Trigger: AAAGATGGAAAAGAAATCCACGCCCTCTAGGGGCTCATCATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CAA 90 bp CTCTTGTTCTCTCCCGAAGAGCTCTCATCACTAGACACAAACTCTTaGCTCTTGAAGCTCTCGCTTAGCTGCCTTGAGGACGACTTGGAT +
Preference number: 6 (lower is better)
Translates to: LLFSPEELSSLDTNS*LLKLSLSCLEDDLD
Trigger: ATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTTTGTGTCTAGTGATGAGAGCTCTTCGGGAGAGAACAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CCA 72 bp CGTTCATGTTCAGAGTCAACGAAATGTCCTCGTCCTTaGAGAAGAGGAGGATCAGGAAGTGGTAGCGAGTTT +
Preference number: 6 (lower is better)
Translates to: RSCSESTKCPRP*RRGGSGSGSEF
Trigger: AAACTCGCTACCACTTCCTGATCCTCCTCTTCTCCAAGGACGAGGACATTTCGTTGACTCTGAACATGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CCA 72 bp TTTACTTTCTTCTTCTTCTTTGACTTGTCCCTGTATTaGCAAGAGGGAAGAGGAGCTGGGCCTTCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: FTFFFFFDLSLY*QEGRGAGPSGP
Trigger: GGGACCTGAAGGCCCAGCTCCTCTTCCCTCTTGCCAATACAGGGACAAGTCAAAGAAGAAGAAGAAAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp ATTTCAAAGTCAAAGGAACGAGTAGTAGTGGTACCACGAGCAAAGTaGACAAAGGAGATCTCATCGAAGCGGATGTGCACAGGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: ISKSKERVVVVPRAK*TKEISSKRMCTGGL
Trigger: CAAGCCACCTGTGCACATCCGCTTCGATGAGATCTCCTTTGTCAACTTTGCTCGTGGTACCACTACTACTCGTTCCTTTGACTTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CAA 72 bp TCAAAGGAACGAGTAGTAGTGGTACCACGAGCAAAGTaGACAAAGGAGATCTCATCGAAGCGGATGTGCACA +
Preference number: 6 (lower is better)
Translates to: SKERVVVVPRAK*TKEISSKRMCT
Trigger: TGTGCACATCCGCTTCGATGAGATCTCCTTTGTCAACTTTGCTCGTGGTACCACTACTACTCGTTCCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278412.7
ENST00000293880.9
CDS CAA 72 bp ATGGTCCAGGAAAAGAGGCCATATTTCCCCAGTGACTaGAATGCCCTATTGTGTCACCCATACTTGGGCAAT +
Preference number: 6 (lower is better)
Translates to: MVQEKRPYFPSD*NALLCHPYLGN
Trigger: ATTGCCCAAGTATGGGTGACACAATAGGGCATTCAAGTCACTGGGGAAATATGGCCTCTTTTCCTGGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp GCGTGGATTTCTTTTCCATCTTTACCTTTACTTTCTTCTTCTTCTTaGACTTGTCCCTGTATTGGCAAGAGGGAAGAGGAGCTGGGCCTT +
Preference number: 6 (lower is better)
Translates to: AWISFPSLPLLSSSS*TCPCIGKREEELGL
Trigger: AAGGCCCAGCTCCTCTTCCCTCTTGCCAATACAGGGACAAGTCAAAGAAGAAGAAGAAAGTAAAGGTAAAGATGGAAAAGAAATCCACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 72 bp CCAACTTCAGTCCAACCCAGTGCCTACCCCTGTAATTaGCAGTCTTGTCTGATATATGTGAAACTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: PTSVQPSAYPCN*QSCLIYVKLLK
Trigger: TTTGAGGAGTTTCACATATATCAGACAAGACTGTCAATTACAGGGGTAGGCACTGGGTTGGACTGAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CCA 72 bp TGTGTTCACTATGCTGTTCACCAAAAGAGGCACTTCTaGTGTTGTTTTAAACCAGTAGGATTAAGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: CVHYAVHQKRHF*CCFKPVGLSLP
Trigger: GGGCAGGCTTAATCCTACTGGTTTAAAACAACACCAGAAGTGCCTCTTTTGGTGAACAGCATAGTGAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp AACCAATTTAGCAGGGGTACTACTGCATTTCTACTGATGAGGAAATaGAGATTCAATGACTTACTCGACAACCCCCAGCAAGTAAGTGGC +
Preference number: 6 (lower is better)
Translates to: NQFSRGTTAFLLMRK*RFNDLLDNPQQVSG
Trigger: GCCACTTACTTGCTGGGGGTTGTCGAGTAAGTCATTGAATCTCAATTTCCTCATCAGTAGAAATGCAGTAGTACCCCTGCTAAATTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS CAA 90 bp GATTTCTTTTCCATCTTTACCTTTACTTTCTTCTTCTTCTTTGACTaGTCCCTGTATTGGCAAGAGGGAAGAGGAGCTGGGCCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: DFFSIFTFTFFFFFD*SLYWQEGRGAGPSG
Trigger: ACCTGAAGGCCCAGCTCCTCTTCCCTCTTGCCAATACAGGGACAAGTCAAAGAAGAAGAAGAAAGTAAAGGTAAAGATGGAAAAGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp CTCCTCAAACAATGCAACTACCTTACACCTGTATGCTaGTGGACAGTCTTCAAGGCACTTTCACAAGTATTT +
Preference number: 6 (lower is better)
Translates to: LLKQCNYLTPVC*WTVFKALSQVF
Trigger: AAATACTTGTGAAAGTGCCTTGAAGACTGTCCAGCAGCATACAGGTGTAAGGTAGTTGCATTGTTTGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS GCA 72 bp CAGTCTTGTCTGATATATGTGAAACTCCTCAAACAATaGAACTACCTTACACCTGTATGCTGCTGGACAGTC +
Preference number: 6 (lower is better)
Translates to: QSCLIYVKLLKQ*NYLTPVCCWTV
Trigger: GACTGTCCAGCAGCATACAGGTGTAAGGTAGTTGCATTGTTTGAGGAGTTTCACATATATCAGACAAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 72 bp TACTGCATTTCTACTGATGAGGAAATTGAGATTCAATaGCTTACTCGACAACCCCCAGCAAGTAAGTGGCAA +
Preference number: 6 (lower is better)
Translates to: YCISTDEEIEIQ*LTRQPPASKWQ
Trigger: TTGCCACTTACTTGCTGGGGGTTGTCGAGTAAGTCATTGAATCTCAATTTCCTCATCAGTAGAAATGCAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293880.9
CDS TCA 72 bp CTGAAGCCAATTAAATCCCCAGACTCCGCAGTAATATaGACTTATGAAATTCCCTTTTATATGTTCCCTTTT +
Preference number: 6 (lower is better)
Translates to: LKPIKSPDSAVI*TYEIPFYMFPF
Trigger: AAAAGGGAACATATAAAAGGGAATTTCATAAGTTCATATTACTGCGGAGTCTGGGGATTTAATTGGCTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293880.9