Pregenerated sensors for SSR4 (Homo sapiens)
Ensembl gene IDs: ENSG00000180879Ensembl transcript IDs: ENST00000320857.7, ENST00000370085.3, ENST00000370086.8, ENST00000370087.5, ENST00000447375.1, ENST00000460616.5, ENST00000471724.5, ENST00000471880.5, ENST00000482902.5, ENST00000485612.5, ENST00000486204.5, ENST00000491833.5
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTCAGGCAGGCCTCGGCTaGGCAGCGGGAGAGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAQAGLG*AAGEAG Trigger: TCCAGCCTCTCCCGCTGCTCAGCCGAGGCCTGCCTG...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR GCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTCAGGGCGCCGAGAGATaGCATCGCCGCCATCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAQGAER*HRRHRL Trigger: GAGGCGATGGCGGCGATGGCATCTCTCGGCGCCCTG...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR CCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTAAGCAAGGGCAGGGCTaGGGTGCCGCCCTCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAKQGQG*GAALRP Trigger: AGGCCTGAGGGCGGCACCCCAGCCCTGCCCTTGCTT...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR CCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTAGCAGCGGGAGAGGCTaGACAGCAGGAGCAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRASSGRG*TAGAAP Trigger: TGGCGCTGCTCCTGCTGTCCAGCCTCTCCCGCTGCT...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR CCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTGCGTGGGCGCTCTTGTaGTCCAGGCTCCAGGACACC | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAAWALL*SRLQDT Trigger: GGTGTCCTGGAGCCTGGACCACAAGAGCGCCCACGC...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTTGTAGTAGGAAGGGGTaGTCTGGGGCTCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRACSRKG*SGAPGR Trigger: CCTGCCTGGAGCCCCAGATCACCCCTTCCTACTACA...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTTCCTCTGAGCCTTCCTaGGGAGGCTGTAGGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRASSEPS*GGCRTP Trigger: AGGAGTCCTACAGCCTCCTCAGGAAGGCTCAGAGGA...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTTCCTCGTTATTCCTCTaGGCCTTCCTGAGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRASSLFL*AFLRRL Trigger: CAGCCTCCTCAGGAAGGCTCAGAGGAATAACGAGGA...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTCGGTCTCAGTGGAAATaGCAGCGTCAGAAGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRARSQWK*QRQKWC Trigger: ACACCACTTCTGACGCTGTCATTTCCACTGAGACCG...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTCATCCTGGCCTCGAGTaGCAGGGAATTGTTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAHPGLE*QGIVFH Trigger: GTGGAAAACAATTCCCTGTCACTCGAGGCCAGGATG...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR CCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTTTCCAAGTGCCCCGATaGTCCACGCTGACTGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAFQVPR*STLTVN Trigger: GTTTACAGTCAGCGTGGACCATCGGGGCACTTGGAA...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTGGGAGATCTCCACAATaGAGACGGTCTCAGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAGRSPQ*RRSQWK Trigger: TTTCCACTGAGACCGTCTTCATTGTGGAGATCTCCC...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTTGTGGCTCTTCGCACTaGAGGCCAAGTAGTAGATCA | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRACGSSH*RPSSRS Trigger: TGATCTACTACTTGGCCTTCAGTGCGAAGAGCCACA...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTTCCTGTGATGTTTATTaGAGGAAGCAAGGGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRASCDVY*RKQGQG Trigger: GCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGA...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTCAGTCCCAGGTCCTGTaGTGTTTATTGAAGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAQSQVL*CLLKEA Trigger: TGCTTCCTTCAATAAACATCACAGGACCTGGGACTG...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS GCA 90 bp | GTCGCCGGCAGCGCCGCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTaGCGTCCCTGGGAGGTGAGCAGGGAAAGAGCCACGGGACCGCGG | + |
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Preference number: 5 (lower is better) Translates to: VAGSAAKAVLGPALL*RPWEVSRERATGPR Trigger: CCGCGGTCCCGTGGCTCTTTCCCTGCTCACCTCCCAGGGACGGCAGAGAAGGGCTGGCCCGAGCACCGCCTTCGCGGCGCTGCCGGCGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000320857.7 ENST00000370087.5 ENST00000491833.5 |
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| CDS TCA 90 bp | CCCTCAACATGGCGGCAGCGGTGCTCTAGGCGCCGGAAGGGGGCGTaGATCGGTGCGACCGCGCGCGTGCGCAGTACCGGGTCCGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: PSTWRQRCSRRRKGA*IGATARVRSTGSAP Trigger: AGGCGCGGACCCGGTACTGCGCACGCGCGCGGTCGCACCGATTCACGCCCCCTTCCGGCGCCTAGAGCACCGCTGCCGCCATGTTGAGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CCA 90 bp | AGCGCCGCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTGCCGTCCCTaGGAGGTGAGCAGGGAAAGAGCCACGGGACCGCGGCAGCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: SAAKAVLGPALLCRP*EVSRERATGPRQRS Trigger: CGACCGCTGCCGCGGTCCCGTGGCTCTTTCCCTGCTCACCTCCCAGGGACGGCAGAGAAGGGCTGGCCCGAGCACCGCCTTCGCGGCGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000320857.7 ENST00000370087.5 ENST00000491833.5 |
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| CDS GCA 90 bp | GCGGGAGAGGCTGGACAGCAGGAGCAGCGCCAGGGCGCCGAGAGATaGCATCGCCGCCATCGCCTCTTCTCTGCCGAACGGCTGGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: AGEAGQQEQRQGAER*HRRHRLFSAERLGR Trigger: CCGGCCCAGCCGTTCGGCAGAGAAGAGGCGATGGCGGCGATGGCATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGCCTCTCCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320857.7 ENST00000482902.5 |
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| CDS GCA 90 bp | TCACCTTCTGCCCCCTCTGGGTGTGGGCAGAGGAGCCCTGTGCGCTaGTCACACGGCCTGCAGGTGGGCAGGCTAGGCCCAGTTGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SPSAPSGCGQRSPVR*SHGLQVGRLGPVGG Trigger: GCCCCCAACTGGGCCTAGCCTGCCCACCTGCAGGCCGTGTGAGCAGCGCACAGGGCTCCTCTGCCCACACCCAGAGGGGGCAGAAGGTGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CCA 90 bp | CAGGGAAAGAGCCACGGGACCGCGGCAGCGGTCGCAGGGGAGCGGTaGGGTAGCCGCACCCGAAGCAGTCTGGAGTCCGATTGGCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: QGKSHGTAAAVAGER*GSRTRSSLESDWLG Trigger: CCCTAGCCAATCGGACTCCAGACTGCTTCGGGTGCGGCTACCCCACCGCTCCCCTGCGACCGCTGCCGCGGTCCCGTGGCTCTTTCCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CCA 90 bp | AGAAAGAAGCCCCGGCTGGGCCGCTACCTGAGCAGCGGGAGAGGCTaGACAGCAGGAGCAGCGCCAGGGCGCCGAGAGATGCCATCGCCG | + |
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Preference number: 5 (lower is better) Translates to: RKKPRLGRYLSSGRG*TAGAAPGRREMPSP Trigger: CGGCGATGGCATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGCCTCTCCCGCTGCTCAGGTAGCGGCCCAGCCGGGGCTTCTTTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS GCA 90 bp | GCGGGAGAGGCTGGACAGCAGGAGCAGCGCCAGGGCGCCGAGAGATaGCATCGCCGCCATCGCCTCTTCTCTGCTTTCCGTCATGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: AGEAGQQEQRQGAER*HRRHRLFSAFRHGA Trigger: AGCGCCATGACGGAAAGCAGAGAAGAGGCGATGGCGGCGATGGCATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGCCTCTCCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370087.5 ENST00000491833.5 |
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| CDS CCA 90 bp | CAGGGAGCGGGAGCCGGGACATGTGTCACGTTCCGTGCTGCAGCTTaGGGGCCGGGCGCACCATGGAGGCTCGGGGACTCCTCTTCGTAT | + |
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Preference number: 5 (lower is better) Translates to: QGAGAGTCVTFRAAA*GPGAPWRLGDSSSY Trigger: ATACGAAGAGGAGTCCCCGAGCCTCCATGGTGCGCCCGGCCCCCAAGCTGCAGCACGGAACGTGACACATGTCCCGGCTCCCGCTCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS TCA 90 bp | GGTGTTGAGCAGAGTGTGGGCAGAGTGGACACGGAGGGGCCACCCTaGCCACCAGTGCCGACACTGCAGCACTCCGGCAGCCAGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GVEQSVGRVDTEGPP*PPVPTLQHSGSQSP Trigger: TGGGCTCTGGCTGCCGGAGTGCTGCAGTGTCGGCACTGGTGGTCAGGGTGGCCCCTCCGTGTCCACTCTGCCCACACTCTGCTCAACACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447375.1 |
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| CDS GCA 90 bp | AGGCCAGCTCGAGTATCCCGGTCTGAGGGCAGGATGGCCCGGCCCTaGCTCATAGCACGGATCAGCTGGGGACCCATGCGCTCTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RPARVSRSEGRMARP*LIARISWGPMRSSC Trigger: GCAGGAAGAGCGCATGGGTCCCCAGCTGATCCGTGCTATGAGGCAGGGCCGGGCCATCCTGCCCTCAGACCGGGATACTCGAGCTGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000485612.5 |
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| CDS CCA 90 bp | GCCTGCGTGGGCGCTCTTGTGGTCCAGGCTCCAGGACACCTGGGTTaGGTGTTGAGCAGAGTGTGGGCAGAGTGGACACGGAGGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: ACVGALVVQAPGHLG*VLSRVWAEWTRRGH Trigger: GTGGCCCCTCCGTGTCCACTCTGCCCACACTCTGCTCAACACCCAACCCAGGTGTCCTGGAGCCTGGACCACAAGAGCGCCCACGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447375.1 |
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| CDS TCA 90 bp | TGGGCGCTCTTGTGGTCCAGGCTCCAGGACACCTGGGTTGGGTGTTaGGCAGAGTGTGGGCAGAGTGGACACGGAGGGGCCACCCTGACC | + |
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Preference number: 5 (lower is better) Translates to: WALLWSRLQDTWVGC*AECGQSGHGGATLT Trigger: GGTCAGGGTGGCCCCTCCGTGTCCACTCTGCCCACACTCTGCTCAACACCCAACCCAGGTGTCCTGGAGCCTGGACCACAAGAGCGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447375.1 |
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| CDS CCA 90 bp | GTGGTCCAGGCTCCAGGACACCTGGGTTGGGTGTTGAGCAGAGTGTaGGCAGAGTGGACACGGAGGGGCCACCCTGACCACCAGTGCCGA | + |
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Preference number: 5 (lower is better) Translates to: VVQAPGHLGWVLSRV*AEWTRRGHPDHQCR Trigger: TCGGCACTGGTGGTCAGGGTGGCCCCTCCGTGTCCACTCTGCCCACACTCTGCTCAACACCCAACCCAGGTGTCCTGGAGCCTGGACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447375.1 |
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| CDS TCA 90 bp | CAGGGCTGGGGTGCCGCCCTCAGGCCTGGATGTGGCTCTTCGCACTaGAGGCCAAGTAGTAGATCACAAGGCCGATCGCCGCAGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: QGWGAALRPGCGSSH*RPSSRSQGRSPQPA Trigger: TGCTGGCTGCGGCGATCGGCCTTGTGATCTACTACTTGGCCTTCAGTGCGAAGAGCCACATCCAGGCCTGAGGGCGGCACCCCAGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000320857.7 ENST00000370085.3 ENST00000370086.8 ENST00000370087.5 ENST00000447375.1 ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000485612.5 ENST00000486204.5 |
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| CDS CCA 90 bp | CCCGGGCCCGGGGCTGGCTGCTGCAGCCACCTCCTAAACACACTCTaGAGTTCAGACCTCAGCCCCTCACGAATGCAAATCGACGGGACC | + |
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Preference number: 5 (lower is better) Translates to: PGPGAGCCSHLLNTL*SSDLSPSRMQIDGT Trigger: GGTCCCGTCGATTTGCATTCGTGAGGGGCTGAGGTCTGAACTCCAGAGTGTGTTTAGGAGGTGGCTGCAGCAGCCAGCCCCGGGCCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS TCA 90 bp | AAGAGGGAGAGATGCCTGGGTAAGGCCAGCTCGAGTATCCCGGTCTaGGGGCAGGATGGCCCGGCCCTGCCTCATAGCACGGATCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: KRERCLGKASSSIPV*GQDGPALPHSTDQL Trigger: CAGCTGATCCGTGCTATGAGGCAGGGCCGGGCCATCCTGCCCTCAGACCGGGATACTCGAGCTGGCCTTACCCAGGCATCTCTCCCTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000485612.5 |
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| CDS GCA 90 bp | TCCCCGAAACTTCGCACCCCGTCGAACTCTCGCGAGAGCGGTATCTaGGTGTCGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: SPKLRTPSNSRESGI*VSGRAEALTFRHGA Trigger: AGCGCCATGACGGAAAGTGAGAGCCTCCGCACGTCCCGACACGCAGATACCGCTCTCGCGAGAGTTCGACGGGGTGCGAAGTTTCGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CCA 90 bp | CCCTGGCAGAACGATGGCTTCAGCAGAGGACGTCAGAGAAGGCTCTaGGTCTGGACCACAGGAGGCAGATCCCTGAGCAGCGGGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PWQNDGFSRGRQRRL*VWTTGGRSLSSGRG Trigger: GCCTCTCCCGCTGCTCAGGGATCTGCCTCCTGTGGTCCAGACCCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | AGGCTCTGGGTCTGGACCACAGGAGGCAGATCCCTAGGAACAGCGTaGAGGCAGTTCTCAGGGGCTAGATCCCGCCAGCCCTTCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RLWVWTTGGRSLGTA*RQFSGARSRQPFCV Trigger: GACACAGAAGGGCTGGCGGGATCTAGCCCCTGAGAACTGCCTCCACGCTGTTCCTAGGGATCTGCCTCCTGTGGTCCAGACCCAGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS CCA 90 bp | CACAAGCCAGCTCAGGGGAGTACAGGTGAGCAGACCAGCCAGCCCTaGTCACCTTCCGCCAGGGGAACCAAGACATGCTGGCCAATCACG | + |
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Preference number: 5 (lower is better) Translates to: HKPAQGSTGEQTSQP*SPSARGTKTCWPIT Trigger: CGTGATTGGCCAGCATGTCTTGGTTCCCCTGGCGGAAGGTGACCAGGGCTGGCTGGTCTGCTCACCTGTACTCCCCTGAGCTGGCTTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS TCA 90 bp | GCCACGGCGGCTGTCACCTCCTTAGTGTCCTTGAAGGAGCCCTTCTaGGGCAGTCACTCACGTATCCCGGCCCGCCTTTCTCAAACCGCT | + |
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Preference number: 5 (lower is better) Translates to: ATAAVTSLVSLKEPF*GSHSRIPARLSQTA Trigger: AGCGGTTTGAGAAAGGCGGGCCGGGATACGTGAGTGACTGCCTCAGAAGGGCTCCTTCAAGGACACTAAGGAGGTGACAGCCGCCGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS TCA 90 bp | CAAGATGAGAGAAAGGGTCTCTGCCCCCGGCCAGTTGACAGAAGGTaGAGACTGGCCCCAGCGTTTCCTGAGCAGCGGGAGAGGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: QDERKGLCPRPVDRR*RLAPAFPEQRERLD Trigger: GTCCAGCCTCTCCCGCTGCTCAGGAAACGCTGGGGCCAGTCTTCACCTTCTGTCAACTGGCCGGGGGCAGAGACCCTTTCTCTCATCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471724.5 |
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| CDS GCA 90 bp | CCCTGCCTCATAGCACGGATCAGCTGGGGACCCATGCGCTCTTCCTaGCCCTTCCAGGTGGGATATGCGAGACAGATCCAAGTGCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: PCLIARISWGPMRSS*PFQVGYARQIQVLG Trigger: ACCGAGCACTTGGATCTGTCTCGCATATCCCACCTGGAAGGGGCAGGAAGAGCGCATGGGTCCCCAGCTGATCCGTGCTATGAGGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000485612.5 |
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| CDS CCA 90 bp | CCCTGGCAGAACGATGGCTTCAGCAGAGGACGTCAGAGAAGGCTCTaGGTCTGGACCACAGGAGGCAGATCCCTAGGAACAGCGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: PWQNDGFSRGRQRRL*VWTTGGRSLGTAWR Trigger: CCTCCACGCTGTTCCTAGGGATCTGCCTCCTGTGGTCCAGACCCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS CCA 90 bp | GGGACAGGTGGGGGCTGGATTCACTGGACAATACATGCCAACACTTaGACCTATGACACGGAGGCCCGGGGGCCACGCCAGCCTCAATTC | + |
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Preference number: 5 (lower is better) Translates to: GTGGGWIHWTIHANT*TYDTEARGPRQPQF Trigger: GAATTGAGGCTGGCGTGGCCCCCGGGCCTCCGTGTCATAGGTCCAAGTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCACCTGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | CCTCTGCATTGGTCTTCCCTACGGGGGCACAAGGCCAGATCCCCATaGCCGGGCCTAACTGGACGCATAGGAACCCTGTTGACTGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PLHWSSLRGHKARSP*PGLTGRIGTLLTVS Trigger: GCTCACAGTCAACAGGGTTCCTATGCGTCCAGTTAGGCCCGGCCATGGGGATCTGGCCTTGTGCCCCCGTAGGGAAGACCAATGCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CCA 90 bp | AGGTACCAAGTAACACTCACCAATCCCGTGACTGGCCCTCTGCATTaGTCTTCCCTACGGGGGCACAAGGCCAGATCCCCATGGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: RYQVTLTNPVTGPLH*SSLRGHKARSPWPG Trigger: GCCCGGCCATGGGGATCTGGCCTTGTGCCCCCGTAGGGAAGACCAATGCAGAGGGCCAGTCACGGGATTGGTGAGTGTTACTTGGTACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS TCA 90 bp | TGGGGGCTGGATTCACTGGACAATACATGCCAACACTTGGACCTATaGCACGGAGGCCCGGGGGCCACGCCAGCCTCAATTCAGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: WGLDSLDNTCQHLDL*HGGPGATPASIQSH Trigger: GTGGCTCTGAATTGAGGCTGGCGTGGCCCCCGGGCCTCCGTGTCATAGGTCCAAGTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | CTCCACGGTTTCCTCTCTCGTGGACCGCTTTGCCACCTATCCCGGTaGCAAAGAACCGGACTTTGCCAGTCATCCCCCATAGTCCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LHGFLSRGPLCHLSR*QRTGLCQSSPIVPQ Trigger: CTGGGGGACTATGGGGGATGACTGGCAAAGTCCGGTTCTTTGCCACCGGGATAGGTGGCAAAGCGGTCCACGAGAGAGGAAACCGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CCA 90 bp | GGGAGGCCAGTTAGGCTGCCAAAACGTTGCAGGCAGCAAGGCTACTaGCCTGAAGGACGGCAGAAAAGGGAATGTGGAGAAAGCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPVRLPKRCRQQGY*PEGRQKRECGESRP Trigger: GGGGCGGCTTTCTCCACATTCCCTTTTCTGCCGTCCTTCAGGCCAGTAGCCTTGCTGCCTGCAACGTTTTGGCAGCCTAACTGGCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS CCA 90 bp | GTTCTCAGCCACCCGCTGTCCAAATGTGGTGCCCTGGCAGAACGATaGCTTCAGCAGAGGACGTCAGAGAAGGCTCTGGGTCTGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLSHPLSKCGALAER*LQQRTSEKALGLDH Trigger: GTGGTCCAGACCCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGGCACCACATTTGGACAGCGGGTGGCTGAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | GGAGGGGCAAGGCCGGCTTTCTGGAGGTGTGCAGGAAGAGCGAACTaGGGACAGGTGGGGGCTGGATTCACTGGACAATACATGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GGARPAFWRCAGRAN*GQVGAGFTGQYMPT Trigger: TGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCACCTGTCCCCAGTTCGCTCTTCCTGCACACCTCCAGAAAGCCGGCCTTGCCCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS-3UTR CAA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTCCTGCGTGGGCGCTCTaGTGGTCCAGGCTCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAPAWAL*WSRLQD Trigger: GTCCTGGAGCCTGGACCACAAGAGCGCCCACGCAGG...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS CCA 90 bp | CAGAACGATGGCTTCAGCAGAGGACGTCAGAGAAGGCTCTGGGTCTaGACCACAGGAGGCAGATCCCTAGGAACAGCGTGGAGGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QNDGFSRGRQRRLWV*TTGGRSLGTAWRQF Trigger: GAACTGCCTCCACGCTGTTCCTAGGGATCTGCCTCCTGTGGTCCAGACCCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS CCA 90 bp | GTGTGCAGGAAGAGCGAACTGGGGACAGGTGGGGGCTGGATTCACTaGACAATACATGCCAACACTTGGACCTATGACACGGAGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VCRKSELGTGGGWIH*TIHANTWTYDTEAR Trigger: CCGGGCCTCCGTGTCATAGGTCCAAGTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCACCTGTCCCCAGTTCGCTCTTCCTGCACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | GGTGGGATATGCGAGACAGATCCAAGTGCTCGGTCACAAATGCAATaGCAACGTAGGCGGGATGGCTGTGAAGGAAGGCTGGGGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GGICETDPSARSQMQ*QRRRDGCEGRLGRG Trigger: GCCCCTCCCCAGCCTTCCTTCACAGCCATCCCGCCTACGTTGCCATTGCATTTGTGACCGAGCACTTGGATCTGTCTCGCATATCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | CCACACAGACAAACTGGCCAATGGCAACCGGGGTGGGCTGACTCCTaGCCCTTTCTCCCGGTCCAGATACTCATTCAGGAAACAGCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PHRQTGQWQPGWADS*PFLPVQILIQETAG Trigger: ACCCGCTGTTTCCTGAATGAGTATCTGGACCGGGAGAAAGGGCCAGGAGTCAGCCCACCCCGGTTGCCATTGGCCAGTTTGTCTGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CCA 90 bp | TGTCCCTGGCAGGAGGTACCAAGTAACACTCACCAATCCCGTGACTaGCCCTCTGCATTGGTCTTCCCTACGGGGGCACAAGGCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: CPWQEVPSNTHQSRD*PSALVFPTGAQGQI Trigger: GATCTGGCCTTGTGCCCCCGTAGGGAAGACCAATGCAGAGGGCCAGTCACGGGATTGGTGAGTGTTACTTGGTACCTCCTGCCAGGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS GCA 90 bp | GCCTGGAATGGGAAGGAGCTAGGGTTTCTGAGGCTGCGGGGGTTTTaGTTCTGCTCTTCTCCGTGTGCGGTCTTGCGTATTCAGGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: AWNGKELGFLRLRGF*FCSSPCAVLRIQVR Trigger: TCGGACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCGCAGCCTCAGAAACCCTAGCTCCTTCCCATTCCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS GCA 90 bp | TCCCCAAAGTGGGAATGTTCTCAGCCACCCGCTGTCCAAATGTGGTaGCCTGGCAGAACGATGGCTTCAGCAGAGGACGTCAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPKWECSQPPAVQMW*PGRTMASAEDVREG Trigger: GCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGGCACCACATTTGGACAGCGGGTGGCTGAGAACATTCCCACTTTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | GGCTCCCCAAAGTGGGAATGTTCTCAGCCACCCGCTGTCCAAATGTaGTGCCCTGGCAGAACGATGGCTTCAGCAGAGGACGTCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSPKWECSQPPAVQM*CPGRTMASAEDVRE Trigger: TTCTCTGACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGGCACCACATTTGGACAGCGGGTGGCTGAGAACATTCCCACTTTGGGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | GGCCGGCTTTCTGGAGGTGTGCAGGAAGAGCGAACTGGGGACAGGTaGGGGCTGGATTCACTGGACAATACATGCCAACACTTGGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: GRLSGGVQEERTGDR*GLDSLDNTCQHLDL Trigger: TAGGTCCAAGTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCACCTGTCCCCAGTTCGCTCTTCCTGCACACCTCCAGAAAGCCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | CACGGATCAGCTGGGGACCCATGCGCTCTTCCTGCCCCTTCCAGGTaGGATATGCGAGACAGATCCAAGTGCTCGGTCACAAATGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: HGSAGDPCALPAPSR*DMRDRSKCSVTNAM Trigger: CATTGCATTTGTGACCGAGCACTTGGATCTGTCTCGCATATCCCACCTGGAAGGGGCAGGAAGAGCGCATGGGTCCCCAGCTGATCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000485612.5 |
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| CDS CCA 90 bp | GCCCAACAACCCCAAAAAGGAGGAGGGACCAGGCCACTCACCCGATaGTCCACGCTGACTGTAAACAGAGGCGGGATGATGGAAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQQPQKGGGTRPLTR*STLTVNRGGMMEMS Trigger: GGACATTTCCATCATCCCGCCTCTGTTTACAGTCAGCGTGGACCATCGGGTGAGTGGCCTGGTCCCTCCTCCTTTTTGGGGTTGTTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS TCA 90 bp | CCAGGCTCCAGGACACCTGATAACGCCCCACATCCTGGCCTCGAGTaGCAGGGAATTGTTTTCCACCGACGTCAGCATAGAGAGCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PGSRTPDNAPHPGLE*QGIVFHRRQHREPC Trigger: ACATGGCTCTCTATGCTGACGTCGGTGGAAAACAATTCCCTGTCACTCGAGGCCAGGATGTGGGGCGTTATCAGGTGTCCTGGAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000320857.7 ENST00000370086.8 ENST00000370087.5 ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000485612.5 ENST00000486204.5 |
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| CDS TCA 90 bp | CAGAGGCCCAAAGGAAAGGAAGGCTGCCGCCTACATCAGAGGGTGTaGAACAAAGGCTCCCCAAAGTGGGAATGTTCTCAGCCACCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRPKGKEGCRLHQRV*NKGSPKWECSQPPA Trigger: AGCGGGTGGCTGAGAACATTCCCACTTTGGGGAGCCTTTGTTTCACACCCTCTGATGTAGGCGGCAGCCTTCCTTTCCTTTGGGCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS GCA 90 bp | CCGGGACTCAAATTTCTCCACGGTTTCCTCTCTCGTGGACCGCTTTaGCACCTATCCCGGTGGCAAAGAACCGGACTTTGCCAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PGLKFLHGFLSRGPL*HLSRWQRTGLCQSS Trigger: GGATGACTGGCAAAGTCCGGTTCTTTGCCACCGGGATAGGTGGCAAAGCGGTCCACGAGAGAGGAAACCGTGGAGAAATTTGAGTCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS GCA 90 bp | ATGAGGAGTGTGCGGAAAGGGAGGCCAGTTAGGCTGCCAAAACGTTaGAGGCAGCAAGGCTACTGGCCTGAAGGACGGCAGAAAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MRSVRKGRPVRLPKR*RQQGYWPEGRQKRE Trigger: TTCCCTTTTCTGCCGTCCTTCAGGCCAGTAGCCTTGCTGCCTGCAACGTTTTGGCAGCCTAACTGGCCTCCCTTTCCGCACACTCCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS CCA 90 bp | AAAGTGGGAATGTTCTCAGCCACCCGCTGTCCAAATGTGGTGCCCTaGCAGAACGATGGCTTCAGCAGAGGACGTCAGAGAAGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVGMFSATRCPNVVP*QNDGFSRGRQRRLW Trigger: CCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGGCACCACATTTGGACAGCGGGTGGCTGAGAACATTCCCACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | CACAAAGCAGGTGAGGAAGGTGACCTGTCAACACTGGCTAGGATCTaGCATCACCGTGCCCTGATCTCTCCGGCACCCCAAGAGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HKAGEEGDLSTLARI*HHRALISPAPQELE Trigger: TTCCAACTCTTGGGGTGCCGGAGAGATCAGGGCACGGTGATGCCAGATCCTAGCCAGTGTTGACAGGTCACCTTCCTCACCTGCTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS TCA 90 bp | CAAGATGAGAGAAAGGGTCTCTGCCCCCGGCCAGTTGACAGAAGGTaGAGACTGGCCCCAGCGTTTCCTGAAGAAGTAAACGGGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QDERKGLCPRPVDRR*RLAPAFPEEVNGRD Trigger: GTCTCTCCCGTTTACTTCTTCAGGAAACGCTGGGGCCAGTCTTCACCTTCTGTCAACTGGCCGGGGGCAGAGACCCTTTCTCTCATCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS TCA 90 bp | AAAACACCCACACAGACAAACTGGCCAATGGCAACCGGGGTGGGCTaGCTCCTGGCCCTTTCTCCCGGTCCAGATACTCATTCAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KTPTQTNWPMATGVG*LLALSPGPDTHSGN Trigger: GTTTCCTGAATGAGTATCTGGACCGGGAGAAAGGGCCAGGAGTCAGCCCACCCCGGTTGCCATTGGCCAGTTTGTCTGTGTGGGTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS GCA 90 bp | AATGGGAAGGAGCTAGGGTTTCTGAGGCTGCGGGGGTTTTGCTTCTaGTCTTCTCCGTGTGCGGTCTTGCGTATTCAGGTCCGAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NGKELGFLRLRGFCF*SSPCAVLRIQVRVF Trigger: GAAGACTCGGACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCGCAGCCTCAGAAACCCTAGCTCCTTCCCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS GCA 90 bp | TTCCAGGTGGGATATGCGAGACAGATCCAAGTGCTCGGTCACAAATaGAATGGCAACGTAGGCGGGATGGCTGTGAAGGAAGGCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FQVGYARQIQVLGHK*NGNVGGMAVKEGWG Trigger: TCCCCAGCCTTCCTTCACAGCCATCCCGCCTACGTTGCCATTGCATTTGTGACCGAGCACTTGGATCTGTCTCGCATATCCCACCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 90 bp | GAATCCGGTTCCGGGACTCAAATTTCTCCACGGTTTCCTCTCTCGTaGACCGCTTTGCCACCTATCCCGGTGGCAAAGAACCGGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESGSGTQISPRFPLS*TALPPIPVAKNRTL Trigger: CAAAGTCCGGTTCTTTGCCACCGGGATAGGTGGCAAAGCGGTCCACGAGAGAGGAAACCGTGGAGAAATTTGAGTCCCGGAACCGGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CCA 90 bp | TTTCTGGAGGTGTGCAGGAAGAGCGAACTGGGGACAGGTGGGGGCTaGATTCACTGGACAATACATGCCAACACTTGGACCTATGACACG | + |
|
Preference number: 5 (lower is better) Translates to: FLEVCRKSELGTGGG*IHWTIHANTWTYDT Trigger: CGTGTCATAGGTCCAAGTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCACCTGTCCCCAGTTCGCTCTTCCTGCACACCTCCAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS-3UTR CAA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTTTCTGGACCCTGTTCTaGCATGTCAGGGAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCAVPGPVMFIEGSKGRAFWTLF*HVREIS Trigger: GGAGATCTCCCTGACATGCAAGAACAGGGTCCAGAA...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS-3UTR CAA 90 bp | TCCTGTGCAGTCCCAGGTCCTGTGATGTTTATTGAAGGAAGCAAGGGCAGGGCTTCGAGTGACAGGGAATaGTTTTCCACCGACGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCAVPGPVMFIEGSKGRASSDRE*FSTDVS Trigger: GCTGACGTCGGTGGAAAACAATTCCCTGTCACTCGA...AGCCCTGCCCTTGCTTCCTTCAATAAACATCACAGGACCTGGGACTGCACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370086.8 |
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| CDS GCA 90 bp | AGGGTTTCTGAGGCTGCGGGGGTTTTGCTTCTGCTCTTCTCCGTGTaGGGTCTTGCGTATTCAGGTCCGAGTCTTCTTTCCTTACACTTA | + |
|
Preference number: 5 (lower is better) Translates to: RVSEAAGVLLLLFSV*GLAYSGPSLLSLHL Trigger: TAAGTGTAAGGAAAGAAGACTCGGACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCGCAGCCTCAGAAACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS TCA 72 bp | TGGCGGCAGCGGTGCTCTAGGCGCCGGAAGGGGGCGTaGATCGGTGCGACCGCGCGCGTGCGCAGTACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: WRQRCSRRRKGA*IGATARVRSTG Trigger: CCCGGTACTGCGCACGCGCGCGGTCGCACCGATTCACGCCCCCTTCCGGCGCCTAGAGCACCGCTGCCGCCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CCA 72 bp | CCCCGGCTGGGCCGCTACCTGAGCAGCGGGAGAGGCTaGACAGCAGGAGCAGCGCCAGGGCGCCGAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PRLGRYLSSGRG*TAGAAPGRREM Trigger: CATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGCCTCTCCCGCTGCTCAGGTAGCGGCCCAGCCGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS GCA 72 bp | GCCGGAAGGGGGCGTGAATCGGTGCGACCGCGCGCGTaGGCAGTACCGGGTCCGCGCCTGTCCCCGAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: AGRGRESVRPRA*AVPGPRLSPKL Trigger: AAGTTTCGGGGACAGGCGCGGACCCGGTACTGCGCACGCGCGCGGTCGCACCGATTCACGCCCCCTTCCGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS GCA 72 bp | GGGAGCGGGAGCCGGGACATGTGTCACGTTCCGTGCTaGAGCTTGGGGGCCGGGCGCACCATGGAGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGSRDMCHVPC*SLGAGRTMEAR Trigger: CCGAGCCTCCATGGTGCGCCCGGCCCCCAAGCTGCAGCACGGAACGTGACACATGTCCCGGCTCCCGCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS GCA 72 bp | GCCCCCTCTGGGTGTGGGCAGAGGAGCCCTGTGCGCTaGTCACACGGCCTGCAGGTGGGCAGGCTAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: APSGCGQRSPVR*SHGLQVGRLGP Trigger: TGGGCCTAGCCTGCCCACCTGCAGGCCGTGTGAGCAGCGCACAGGGCTCCTCTGCCCACACCCAGAGGGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CCA 72 bp | AGCCACGGGACCGCGGCAGCGGTCGCAGGGGAGCGGTaGGGTAGCCGCACCCGAAGCAGTCTGGAGTCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: SHGTAAAVAGER*GSRTRSSLESD Trigger: ATCGGACTCCAGACTGCTTCGGGTGCGGCTACCCCACCGCTCCCCTGCGACCGCTGCCGCGGTCCCGTGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS GCA 72 bp | AGCGCCGCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTaGCGTCCCTGGGAGGTGAGCAGGGAAAGAGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SAAKAVLGPALL*RPWEVSRERAT Trigger: CGTGGCTCTTTCCCTGCTCACCTCCCAGGGACGGCAGAGAAGGGCTGGCCCGAGCACCGCCTTCGCGGCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000320857.7 ENST00000370087.5 ENST00000491833.5 |
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| CDS GCA 72 bp | GCAGGGAGCGGGAGCCGGGACATGTGTCACGTTCCGTaGTGCAGCTTGGGGGCCGGGCGCACCATGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGSGSRDMCHVP*CSLGAGRTMEA Trigger: AGCCTCCATGGTGCGCCCGGCCCCCAAGCTGCAGCACGGAACGTGACACATGTCCCGGCTCCCGCTCCCTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS CCA 72 bp | AAGGCGGTGCTCGGGCCAGCCCTTCTCTGCCGTCCCTaGGAGGTGAGCAGGGAAAGAGCCACGGGACCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KAVLGPALLCRP*EVSRERATGPR Trigger: CCGCGGTCCCGTGGCTCTTTCCCTGCTCACCTCCCAGGGACGGCAGAGAAGGGCTGGCCCGAGCACCGCCTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000320857.7 ENST00000370087.5 ENST00000491833.5 |
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| CDS CAA 90 bp | GCAGGGAGCGGGAGCCGGGACATGTGTCACGTTCCGTGCTGCAGCTaGGGGGCCGGGCGCACCATGGAGGCTCGGGGACTCCTCTTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: AGSGSRDMCHVPCCS*GAGRTMEARGLLFV Trigger: TACGAAGAGGAGTCCCCGAGCCTCCATGGTGCGCCCGGCCCCCAAGCTGCAGCACGGAACGTGACACATGTCCCGGCTCCCGCTCCCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS GCA 72 bp | GCTGGACAGCAGGAGCAGCGCCAGGGCGCCGAGAGATaGCATCGCCGCCATCGCCTCTTCTCTGCCGAACGG | + |
|
Preference number: 6 (lower is better) Translates to: AGQQEQRQGAER*HRRHRLFSAER Trigger: CCGTTCGGCAGAGAAGAGGCGATGGCGGCGATGGCATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320857.7 ENST00000482902.5 |
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| CDS GCA 72 bp | GCAGAGTGGACACGGAGGGGCCACCCTGACCACCAGTaGCGACACTGCAGCACTCCGGCAGCCAGAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AEWTRRGHPDHQ*RHCSTPAARAH Trigger: GTGGGCTCTGGCTGCCGGAGTGCTGCAGTGTCGGCACTGGTGGTCAGGGTGGCCCCTCCGTGTCCACTCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447375.1 |
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| CDS CCA 72 bp | GACTGGCCCCAGCGTTTCCTGAGCAGCGGGAGAGGCTaGACAGCAGGAGCAGCGCCAGGGCGCCGAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: DWPQRFLSSGRG*TAGAAPGRREM Trigger: CATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGCCTCTCCCGCTGCTCAGGAAACGCTGGGGCCAGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471724.5 |
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| CDS TCA 72 bp | TTCGCGCCGGGGTTGATTGGCCGCCTCCGCTGTCACTaGGGGGATTGGCCGAAGTTGGCCCTGGACCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FAPGLIGRLRCH*GDWPKLALDRL Trigger: GAGCCGGTCCAGGGCCAACTTCGGCCAATCCCCTCAGTGACAGCGGAGGCGGCCAATCAACCCCGGCGCGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS TCA 72 bp | CAGAGTGTGGGCAGAGTGGACACGGAGGGGCCACCCTaGCCACCAGTGCCGACACTGCAGCACTCCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSVGRVDTEGPP*PPVPTLQHSGS Trigger: GCTGCCGGAGTGCTGCAGTGTCGGCACTGGTGGTCAGGGTGGCCCCTCCGTGTCCACTCTGCCCACACTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447375.1 |
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| CDS GCA 72 bp | CGAGTATCCCGGTCTGAGGGCAGGATGGCCCGGCCCTaGCTCATAGCACGGATCAGCTGGGGACCCATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RVSRSEGRMARP*LIARISWGPMR Trigger: GCGCATGGGTCCCCAGCTGATCCGTGCTATGAGGCAGGGCCGGGCCATCCTGCCCTCAGACCGGGATACTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000485612.5 |
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| CDS GCA 72 bp | GCTGGACAGCAGGAGCAGCGCCAGGGCGCCGAGAGATaGCATCGCCGCCATCGCCTCTTCTCTGCTTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: AGQQEQRQGAER*HRRHRLFSAFR Trigger: ACGGAAAGCAGAGAAGAGGCGATGGCGGCGATGGCATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370087.5 ENST00000491833.5 |
||
| CDS GCA 72 bp | CAGCCCTGGTCACCTTCCGCCAGGGGAACCAAGACATaGTGGCCAATCACGGCCCAGCAGCAGAGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QPWSPSARGTKT*WPITAQQQSWG Trigger: GCCCCAGCTCTGCTGCTGGGCCGTGATTGGCCAGCATGTCTTGGTTCCCCTGGCGGAAGGTGACCAGGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | ACGTTCCGTGCTGCAGCTTGGGGGCCGGGCGCACCATaGAGGCTCGGGGACTCCTCTTCGTATGGGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: TFRAAAWGPGAP*RLGDSSSYGQT Trigger: TGTCTGCCCATACGAAGAGGAGTCCCCGAGCCTCCATGGTGCGCCCGGCCCCCAAGCTGCAGCACGGAACGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS TCA 72 bp | AGATGCCTGGGTAAGGCCAGCTCGAGTATCCCGGTCTaGGGGCAGGATGGCCCGGCCCTGCCTCATAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RCLGKASSSIPV*GQDGPALPHST Trigger: CGTGCTATGAGGCAGGGCCGGGCCATCCTGCCCTCAGACCGGGATACTCGAGCTGGCCTTACCCAGGCATCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000485612.5 |
||
| CDS CCA 72 bp | CACCTGGGTTGGGTGTTGAGCAGAGTGTGGGCAGAGTaGACACGGAGGGGCCACCCTGACCACCAGTGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: HLGWVLSRVWAE*TRRGHPDHQCR Trigger: TCGGCACTGGTGGTCAGGGTGGCCCCTCCGTGTCCACTCTGCCCACACTCTGCTCAACACCCAACCCAGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447375.1 |
||
| CDS CCA 72 bp | GCTCCAGGACACCTGGGTTGGGTGTTGAGCAGAGTGTaGGCAGAGTGGACACGGAGGGGCCACCCTGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: APGHLGWVLSRV*AEWTRRGHPDH Trigger: GTGGTCAGGGTGGCCCCTCCGTGTCCACTCTGCCCACACTCTGCTCAACACCCAACCCAGGTGTCCTGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447375.1 |
||
| CDS CCA 72 bp | CCCTGGTCACCTTCCGCCAGGGGAACCAAGACATGCTaGCCAATCACGGCCCAGCAGCAGAGCTGGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PWSPSARGTKTC*PITAQQQSWGC Trigger: ACAGCCCCAGCTCTGCTGCTGGGCCGTGATTGGCCAGCATGTCTTGGTTCCCCTGGCGGAAGGTGACCAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | GTCTCTGCCCCCGGCCAGTTGACAGAAGGTGAAGACTaGCCCCAGCGTTTCCTGAGCAGCGGGAGAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSAPGQLTEGED*PQRFLSSGRGW Trigger: CCAGCCTCTCCCGCTGCTCAGGAAACGCTGGGGCCAGTCTTCACCTTCTGTCAACTGGCCGGGGGCAGAGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471724.5 |
||
| CDS GCA 72 bp | CTTCGCACCCCGTCGAACTCTCGCGAGAGCGGTATCTaGGTGTCGGGACGTGCGGAGGCTCTCACTTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LRTPSNSRESGI*VSGRAEALTFR Trigger: ACGGAAAGTGAGAGCCTCCGCACGTCCCGACACGCAGATACCGCTCTCGCGAGAGTTCGACGGGGTGCGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320857.7 |
||
| CDS GCA 72 bp | TCTCAGGGGCTAGATCCCGCCAGCCCTTCTGTGTCCTaGCTAAGTTGGGCCTGCTTCCTGTGGCGCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SQGLDPASPSVS*LSWACFLWRRG Trigger: TCCCCTGCGCCACAGGAAGCAGGCCCAACTTAGGCAGGACACAGAAGGGCTGGCGGGATCTAGCCCCTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | GGCGCTCTTGTGGTCCAGGCTCCAGGACACCTGGGTTaGGTGTTGAGCAGAGTGTGGGCAGAGTGGACACGG | + |
|
Preference number: 6 (lower is better) Translates to: GALVVQAPGHLG*VLSRVWAEWTR Trigger: CCGTGTCCACTCTGCCCACACTCTGCTCAACACCCAACCCAGGTGTCCTGGAGCCTGGACCACAAGAGCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447375.1 |
||
| CDS CCA 72 bp | GTCTGGACCACAGGAGGCAGATCCCTAGGAACAGCGTaGAGGCAGTTCTCAGGGGCTAGATCCCGCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VWTTGGRSLGTA*RQFSGARSRQP Trigger: GGGCTGGCGGGATCTAGCCCCTGAGAACTGCCTCCACGCTGTTCCTAGGGATCTGCCTCCTGTGGTCCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | GGGCTGAGTGATTTCCTGAGTCTACAAGGGAGGTGCTaGGGTCAGGGGTGCCCAGTGGGCTGCCCAAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLSDFLSLQGRC*GQGCPVGCPRG Trigger: ACCCCTTGGGCAGCCCACTGGGCACCCCTGACCCCAGCACCTCCCTTGTAGACTCAGGAAATCACTCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS CCA 72 bp | GGGGCACAAGGCCAGATCCCCATGGCCGGGCCTAACTaGACGCATAGGAACCCTGTTGACTGTGAGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAQGQIPMAGPN*THRNPVDCEQG Trigger: CCCCTGCTCACAGTCAACAGGGTTCCTATGCGTCCAGTTAGGCCCGGCCATGGGGATCTGGCCTTGTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS TCA 72 bp | GGTGCCGCCCTCAGGCCTGGATGTGGCTCTTCGCACTaGAGGCCAAGTAGTAGATCACAAGGCCGATCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GAALRPGCGSSH*RPSSRSQGRSP Trigger: CGGCGATCGGCCTTGTGATCTACTACTTGGCCTTCAGTGCGAAGAGCCACATCCAGGCCTGAGGGCGGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000320857.7 ENST00000370085.3 ENST00000370086.8 ENST00000370087.5 ENST00000447375.1 ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000485612.5 ENST00000486204.5 |
||
| CDS TCA 72 bp | AGAAAGGGTCTCTGCCCCCGGCCAGTTGACAGAAGGTaGAGACTGGCCCCAGCGTTTCCTGAGCAGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RKGLCPRPVDRR*RLAPAFPEQRE Trigger: CTCCCGCTGCTCAGGAAACGCTGGGGCCAGTCTTCACCTTCTGTCAACTGGCCGGGGGCAGAGACCCTTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471724.5 |
||
| CDS CCA 72 bp | GGGGGCTGGATTCACTGGACAATACATGCCAACACTTaGACCTATGACACGGAGGCCCGGGGGCCACGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GGWIHWTIHANT*TYDTEARGPRQ Trigger: CTGGCGTGGCCCCCGGGCCTCCGTGTCATAGGTCCAAGTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
||
| CDS CCA 72 bp | GGCTTCAGCAGAGGACGTCAGAGAAGGCTCTGGGTCTaGACCACAGGAGGCAGATCCCTGAGCAGCGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GFSRGRQRRLWV*TTGGRSLSSGR Trigger: TCTCCCGCTGCTCAGGGATCTGCCTCCTGTGGTCCAGACCCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
||
| CDS CCA 72 bp | TGGTCTTCCCTACGGGGGCACAAGGCCAGATCCCCATaGCCGGGCCTAACTGGACGCATAGGAACCCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WSSLRGHKARSP*PGLTGRIGTLL Trigger: CAACAGGGTTCCTATGCGTCCAGTTAGGCCCGGCCATGGGGATCTGGCCTTGTGCCCCCGTAGGGAAGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS CAA 90 bp | GAGGTACCAAGTAACACTCACCAATCCCGTGACTGGCCCTCTGCATaGGTCTTCCCTACGGGGGCACAAGGCCAGATCCCCATGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVPSNTHQSRDWPSA*VFPTGAQGQIPMAG Trigger: CCCGGCCATGGGGATCTGGCCTTGTGCCCCCGTAGGGAAGACCAATGCAGAGGGCCAGTCACGGGATTGGTGAGTGTTACTTGGTACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS GCA 72 bp | GTGCGGAAAGGGAGGCCAGTTAGGCTGCCAAAACGTTaGAGGCAGCAAGGCTACTGGCCTGAAGGACGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VRKGRPVRLPKR*RQQGYWPEGRQ Trigger: CTGCCGTCCTTCAGGCCAGTAGCCTTGCTGCCTGCAACGTTTTGGCAGCCTAACTGGCCTCCCTTTCCGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | GCTGGGGACCCATGCGCTCTTCCTGCCCCTTCCAGGTaGGATATGCGAGACAGATCCAAGTGCTCGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: AGDPCALPAPSR*DMRDRSKCSVT Trigger: TGTGACCGAGCACTTGGATCTGTCTCGCATATCCCACCTGGAAGGGGCAGGAAGAGCGCATGGGTCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000485612.5 ENST00000491833.5 |
||
| CDS CCA 72 bp | AGATCACAAGGCCGATCGCCGCAGCCAGCACCTCAGTaGACACCCAGGGCCCGTTCCAAGTGCCCTGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSQGRSPQPAPQ*TPRARSKCPEK Trigger: TTTTTCAGGGCACTTGGAACGGGCCCTGGGTGTCCACTGAGGTGCTGGCTGCGGCGATCGGCCTTGTGATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | CACCCACACAGACAAACTGGCCAATGGCAACCGGGGTaGGCTGACTCCTGGCCCTTTCTCCCGGTCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: HPHRQTGQWQPG*ADSWPFLPVQI Trigger: TATCTGGACCGGGAGAAAGGGCCAGGAGTCAGCCCACCCCGGTTGCCATTGGCCAGTTTGTCTGTGTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS CAA 72 bp | CCCTTCCTAGCTTATGTGGCTCCTCCAGCCCCGTTTTaGGCCGCGATCGCTCAGCGCTACAGAGCTTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PFLAYVAPPAPF*AAIAQRYRASL Trigger: GAGCGAAGCTCTGTAGCGCTGAGCGATCGCGGCCAAAAACGGGGCTGGAGGAGCCACATAAGCTAGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000460616.5 ENST00000486204.5 |
||
| CDS TCA 72 bp | CATCTAACTCGCCCCGCTCTTGCTCCCTCTCCTCACTaGGGTCCCTTCCTAGCTTATGTGGCTCCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLTRPALAPSPH*GPFLAYVAPPA Trigger: GGCTGGAGGAGCCACATAAGCTAGGAAGGGACCTCAGTGAGGAGAGGGAGCAAGAGCGGGGCGAGTTAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460616.5 ENST00000486204.5 |
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| CDS GCA 72 bp | ACACACTCTGGAGTTCAGACCTCAGCCCCTCACGAATaGAAATCGACGGGACCCCTGGTCGGCTCTGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: THSGVQTSAPHE*KSTGPLVGSAE Trigger: TTCGGCAGAGCCGACCAGGGGTCCCGTCGATTTGCATTCGTGAGGGGCTGAGGTCTGAACTCCAGAGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | GGGACTCCTCTTCGTATGGGCAGACAAGGAAAAGCCTaGCTGCCGGTAAACGTGCGCGAGGTGCTTTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTPLRMGRQGKA*LPVNVREVLWS Trigger: GGACCAAAGCACCTCGCGCACGTTTACCGGCAGCCAGGCTTTTCCTTGTCTGCCCATACGAAGAGGAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS CCA 72 bp | CACCCGCTGTCCAAATGTGGTGCCCTGGCAGAACGATaGCTTCAGCAGAGGACGTCAGAGAAGGCTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HPLSKCGALAER*LQQRTSEKALG Trigger: ACCCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGGCACCACATTTGGACAGCGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 72 bp | AGGCCGGCTTTCTGGAGGTGTGCAGGAAGAGCGAACTaGGGACAGGTGGGGGCTGGATTCACTGGACAATAC | + |
|
Preference number: 6 (lower is better) Translates to: RPAFWRCAGRAN*GQVGAGFTGQY Trigger: GTATTGTCCAGTGAATCCAGCCCCCACCTGTCCCCAGTTCGCTCTTCCTGCACACCTCCAGAAAGCCGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 72 bp | CCCCAAAAAGGAGGAGGGACCAGGCCACTCACCCGATaGTCCACGCTGACTGTAAACAGAGGCGGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: PQKGGGTRPLTR*STLTVNRGGMM Trigger: CATCATCCCGCCTCTGTTTACAGTCAGCGTGGACCATCGGGTGAGTGGCCTGGTCCCTCCTCCTTTTTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | AACGATGGCTTCAGCAGAGGACGTCAGAGAAGGCTCTaGGTCTGGACCACAGGAGGCAGATCCCTGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NDGFSRGRQRRL*VWTTGGRSLSS Trigger: GCTGCTCAGGGATCTGCCTCCTGTGGTCCAGACCCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
||
| CDS CCA 72 bp | GGTGAGGAAGGTGACCTGTCAACACTGGCTAGGATCTaGCATCACCGTGCCCTGATCTCTCCGGCACCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GEEGDLSTLARI*HHRALISPAPQ Trigger: TTGGGGTGCCGGAGAGATCAGGGCACGGTGATGCCAGATCCTAGCCAGTGTTGACAGGTCACCTTCCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CCA 72 bp | GTAACACTCACCAATCCCGTGACTGGCCCTCTGCATTaGTCTTCCCTACGGGGGCACAAGGCCAGATCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VTLTNPVTGPLH*SSLRGHKARSP Trigger: TGGGGATCTGGCCTTGTGCCCCCGTAGGGAAGACCAATGCAGAGGGCCAGTCACGGGATTGGTGAGTGTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CAA 72 bp | AGTAACACTCACCAATCCCGTGACTGGCCCTCTGCATaGGTCTTCCCTACGGGGGCACAAGGCCAGATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SNTHQSRDWPSA*VFPTGAQGQIP Trigger: GGGGATCTGGCCTTGTGCCCCCGTAGGGAAGACCAATGCAGAGGGCCAGTCACGGGATTGGTGAGTGTTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS CAA 90 bp | CGCCTGGAATGGGAAGGAGCTAGGGTTTCTGAGGCTGCGGGGGTTTaGCTTCTGCTCTTCTCCGTGTGCGGTCTTGCGTATTCAGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RLEWEGARVSEAAGV*LLLFSVCGLAYSGP Trigger: CGGACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCGCAGCCTCAGAAACCCTAGCTCCTTCCCATTCCAGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS TCA 72 bp | AACCATCTGAAGCAGCTGCCAGCCAGCACCTGGCCCTaGTGGGTAAGAGGTTTGACCTCTAGGCCATGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NHLKQLPASTWP*WVRGLTSRPCS Trigger: GGAGCATGGCCTAGAGGTCAAACCTCTTACCCATCAGGGCCAGGTGCTGGCTGGCAGCTGCTTCAGATGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320857.7 |
||
| CDS TCA 72 bp | GCTGTCACCTCCTTAGTGTCCTTGAAGGAGCCCTTCTaGGGCAGTCACTCACGTATCCCGGCCCGCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVTSLVSLKEPF*GSHSRIPARLS Trigger: AGAAAGGCGGGCCGGGATACGTGAGTGACTGCCTCAGAAGGGCTCCTTCAAGGACACTAAGGAGGTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS TCA 72 bp | CTCAATTCAGAGCCACAAACGGCCTGGACGAGTTACTaGAGGCATCCTCAGCAGAGACATCGGGGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LNSEPQTAWTSY*RHPQQRHRGWG Trigger: CCCCCACCCCCGATGTCTCTGCTGAGGATGCCTTCAGTAACTCGTCCAGGCCGTTTGTGGCTCTGAATTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471724.5 ENST00000482902.5 ENST00000491833.5 |
||
| CDS TCA 72 bp | ACACAGACAAACTGGCCAATGGCAACCGGGGTGGGCTaGCTCCTGGCCCTTTCTCCCGGTCCAGATACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TQTNWPMATGVG*LLALSPGPDTH Trigger: ATGAGTATCTGGACCGGGAGAAAGGGCCAGGAGTCAGCCCACCCCGGTTGCCATTGGCCAGTTTGTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS GCA 72 bp | TGGGAATGTTCTCAGCCACCCGCTGTCCAAATGTGGTaGCCTGGCAGAACGATGGCTTCAGCAGAGGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: WECSQPPAVQMW*PGRTMASAEDV Trigger: GACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGGCACCACATTTGGACAGCGGGTGGCTGAGAACATTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
||
| CDS CCA 72 bp | CACCCGCCCTCCTGTCTGAAACCCCACTGTCTCACCTaGACCCTGTTCTTGCATGTCAGGGAGATCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: HPPSCLKPHCLT*TLFLHVREIST Trigger: TGTGGAGATCTCCCTGACATGCAAGAACAGGGTCCAGGTGAGACAGTGGGGTTTCAGACAGGAGGGCGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS CCA 72 bp | CAAACTGGCCAATGGCAACCGGGGTGGGCTGACTCCTaGCCCTTTCTCCCGGTCCAGATACTCATTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QTGQWQPGWADS*PFLPVQILIQE Trigger: TTCCTGAATGAGTATCTGGACCGGGAGAAAGGGCCAGGAGTCAGCCCACCCCGGTTGCCATTGGCCAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
||
| CDS TCA 72 bp | GCTGCCAAAACGTTGCAGGCAGCAAGGCTACTGGCCTaGAGGACGGCAGAAAAGGGAATGTGGAGAAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AAKTLQAARLLA*RTAEKGMWRKP Trigger: CGGCTTTCTCCACATTCCCTTTTCTGCCGTCCTTCAGGCCAGTAGCCTTGCTGCCTGCAACGTTTTGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS TCA 72 bp | GATTCACTGGACAATACATGCCAACACTTGGACCTATaGCACGGAGGCCCGGGGGCCACGCCAGCCTCAATT | + |
|
Preference number: 6 (lower is better) Translates to: DSLDNTCQHLDL*HGGPGATPASI Trigger: AATTGAGGCTGGCGTGGCCCCCGGGCCTCCGTGTCATAGGTCCAAGTGTTGGCATGTATTGTCCAGTGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
||
| CDS GCA 72 bp | GAGGCTGCGGGGGTTTTGCTTCTGCTCTTCTCCGTGTaGGGTCTTGCGTATTCAGGTCCGAGTCTTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EAAGVLLLLFSV*GLAYSGPSLLS Trigger: GGAAAGAAGACTCGGACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCGCAGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
||
| CDS GCA 72 bp | GAGCTAGGGTTTCTGAGGCTGCGGGGGTTTTGCTTCTaGTCTTCTCCGTGTGCGGTCTTGCGTATTCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ELGFLRLRGFCF*SSPCAVLRIQV Trigger: GACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCGCAGCCTCAGAAACCCTAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
||
| CDS GCA 72 bp | GGGAAGGAGCTAGGGTTTCTGAGGCTGCGGGGGTTTTaGTTCTGCTCTTCTCCGTGTGCGGTCTTGCGTATT | + |
|
Preference number: 6 (lower is better) Translates to: GKELGFLRLRGF*FCSSPCAVLRI Trigger: AATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCGCAGCCTCAGAAACCCTAGCTCCTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
||
| CDS CCA 72 bp | TTCCTCTCTCGTGGACCGCTTTGCCACCTATCCCGGTaGCAAAGAACCGGACTTTGCCAGTCATCCCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: FLSRGPLCHLSR*QRTGLCQSSPI Trigger: TATGGGGGATGACTGGCAAAGTCCGGTTCTTTGCCACCGGGATAGGTGGCAAAGCGGTCCACGAGAGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320857.7 |
||
| CDS CCA 72 bp | AACGATGGCTTCAGCAGAGGACGTCAGAGAAGGCTCTaGGTCTGGACCACAGGAGGCAGATCCCTAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: NDGFSRGRQRRL*VWTTGGRSLGT Trigger: TGTTCCTAGGGATCTGCCTCCTGTGGTCCAGACCCAGAGCCTTCTCTGACGTCCTCTGCTGAAGCCATCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460616.5 |
||
| CDS CCA 72 bp | ATGTTCTCAGCCACCCGCTGTCCAAATGTGGTGCCCTaGCAGAACGATGGCTTCAGCAGAGGACGTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: MFSATRCPNVVP*QNDGFSRGRQR Trigger: TCTCTGACGTCCTCTGCTGAAGCCATCGTTCTGCCAGGGCACCACATTTGGACAGCGGGTGGCTGAGAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 72 bp | AAGTGGGAATGTTCTCAGCCACCCGCTGTCCAAATGTaGTGCCCTGGCAGAACGATGGCTTCAGCAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: KWECSQPPAVQM*CPGRTMASAED Trigger: GTCCTCTGCTGAAGCCATCGTTCTGCCAGGGCACCACATTTGGACAGCGGGTGGCTGAGAACATTCCCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 72 bp | GTGTGCAGGAAGAGCGAACTGGGGACAGGTGGGGGCTaGATTCACTGGACAATACATGCCAACACTTGGACC | + |
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Preference number: 6 (lower is better) Translates to: VCRKSELGTGGG*IHWTIHANTWT Trigger: GGTCCAAGTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCACCTGTCCCCAGTTCGCTCTTCCTGCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 72 bp | TCTGGAGGTGTGCAGGAAGAGCGAACTGGGGACAGGTaGGGGCTGGATTCACTGGACAATACATGCCAACAC | + |
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Preference number: 6 (lower is better) Translates to: SGGVQEERTGDR*GLDSLDNTCQH Trigger: GTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCACCTGTCCCCAGTTCGCTCTTCCTGCACACCTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CCA 72 bp | CAGGAGGTACCAAGTAACACTCACCAATCCCGTGACTaGCCCTCTGCATTGGTCTTCCCTACGGGGGCACAA | + |
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Preference number: 6 (lower is better) Translates to: QEVPSNTHQSRD*PSALVFPTGAQ Trigger: TTGTGCCCCCGTAGGGAAGACCAATGCAGAGGGCCAGTCACGGGATTGGTGAGTGTTACTTGGTACCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CAA 72 bp | GCTTTGCCACCTATCCCGGTGGCAAAGAACCGGACTTaGCCAGTCATCCCCCATAGTCCCCCAGTCTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: ALPPIPVAKNRT*PVIPHSPPVLE Trigger: CTCTAAGACTGGGGGACTATGGGGGATGACTGGCAAAGTCCGGTTCTTTGCCACCGGGATAGGTGGCAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CAA 90 bp | TCCGGGACTCAAATTTCTCCACGGTTTCCTCTCTCGTGGACCGCTTaGCCACCTATCCCGGTGGCAAAGAACCGGACTTTGCCAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: SGTQISPRFPLSWTA*PPIPVAKNRTLPVI Trigger: GATGACTGGCAAAGTCCGGTTCTTTGCCACCGGGATAGGTGGCAAAGCGGTCCACGAGAGAGGAAACCGTGGAGAAATTTGAGTCCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CAA 90 bp | GGACACCTGATAACGCCCCACATCCTGGCCTCGAGTGACAGGGAATaGTTTTCCACCGACGTCAGCATAGAGAGCCATGTTCTGGACCCT | + |
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Preference number: 6 (lower is better) Translates to: GHLITPHILASSDRE*FSTDVSIESHVLDP Trigger: AGGGTCCAGAACATGGCTCTCTATGCTGACGTCGGTGGAAAACAATTCCCTGTCACTCGAGGCCAGGATGTGGGGCGTTATCAGGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000320857.7 ENST00000370086.8 ENST00000370087.5 ENST00000460616.5 ENST00000471880.5 ENST00000485612.5 ENST00000486204.5 |
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| CDS CAA 90 bp | CCGCCCTCCTGTCTGAAACCCCACTGTCTCACCTGGACCCTGTTCTaGCATGTCAGGGAGATCTCCACAATGAAGACGGTCTCAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PPSCLKPHCLTWTLF*HVREISTMKTVSVE Trigger: TTCCACTGAGACCGTCTTCATTGTGGAGATCTCCCTGACATGCAAGAACAGGGTCCAGGTGAGACAGTGGGGTTTCAGACAGGAGGGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CAA 90 bp | GCATCACCGTGCCCTGATCTCTCCGGCACCCCAAGAGTTGGAATCTaGATTCTCCCTCTATCGACACAGGTCCCCCATCAACTAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: ASPCPDLSGTPRVGI*ILPLSTQVPHQLAV Trigger: CACTGCTAGTTGATGGGGGACCTGTGTCGATAGAGGGAGAATCAAGATTCCAACTCTTGGGGTGCCGGAGAGATCAGGGCACGGTGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CAA 90 bp | GGACACCTGATAACGCCCCACATCCTGGCCTCGAGTGACAGGGAATaGTTTTCCACCGACGTCAGCATAGAGAGCCATGTTCTGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GHLITPHILASSDRE*FSTDVSIESHVLGE Trigger: CTCACCCAGAACATGGCTCTCTATGCTGACGTCGGTGGAAAACAATTCCCTGTCACTCGAGGCCAGGATGTGGGGCGTTATCAGGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS TCA 72 bp | TCTGGATACGTCCCTGACTATAGTTCAGGGAATTCCTaGGGGGCAGATGAGGAGTGTGCGGAAAGGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SGYVPDYSSGNS*GADEECAEREA Trigger: GGCCTCCCTTTCCGCACACTCCTCATCTGCCCCTCAGGAATTCCCTGAACTATAGTCAGGGACGTATCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS TCA 72 bp | AGAAAGGGTCTCTGCCCCCGGCCAGTTGACAGAAGGTaGAGACTGGCCCCAGCGTTTCCTGAAGAAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: RKGLCPRPVDRR*RLAPAFPEEVN Trigger: GTTTACTTCTTCAGGAAACGCTGGGGCCAGTCTTCACCTTCTGTCAACTGGCCGGGGGCAGAGACCCTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS TCA 72 bp | GCCCTGATCTCTCCGGCACCCCAAGAGTTGGAATCTTaGTTCTCCCTCTATCGACACAGGTCCCCCATCAAC | + |
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Preference number: 6 (lower is better) Translates to: ALISPAPQELES*FSLYRHRSPIN Trigger: GTTGATGGGGGACCTGTGTCGATAGAGGGAGAATCAAGATTCCAACTCTTGGGGTGCCGGAGAGATCAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS CCA 72 bp | TGCGAGACAGATCCAAGTGCTCGGTCACAAATGCAATaGCAACGTAGGCGGGATGGCTGTGAAGGAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CETDPSARSQMQ*QRRRDGCEGRL Trigger: CAGCCTTCCTTCACAGCCATCCCGCCTACGTTGCCATTGCATTTGTGACCGAGCACTTGGATCTGTCTCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS TCA 72 bp | AGGACACCTGATAACGCCCCACATCCTGGCCTCGAGTaGCAGGGAATTGTTTTCCACCGACGTCAGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: RTPDNAPHPGLE*QGIVFHRRQHR Trigger: TCTATGCTGACGTCGGTGGAAAACAATTCCCTGTCACTCGAGGCCAGGATGTGGGGCGTTATCAGGTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000320857.7 ENST00000370086.8 ENST00000370087.5 ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000485612.5 ENST00000486204.5 |
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| CDS GCA 72 bp | AAATTTCTCCACGGTTTCCTCTCTCGTGGACCGCTTTaGCACCTATCCCGGTGGCAAAGAACCGGACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: KFLHGFLSRGPL*HLSRWQRTGLC Trigger: GCAAAGTCCGGTTCTTTGCCACCGGGATAGGTGGCAAAGCGGTCCACGAGAGAGGAAACCGTGGAGAAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CCA 72 bp | GTTAGGCTGCCAAAACGTTGCAGGCAGCAAGGCTACTaGCCTGAAGGACGGCAGAAAAGGGAATGTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: VRLPKRCRQQGY*PEGRQKRECGE Trigger: TTCTCCACATTCCCTTTTCTGCCGTCCTTCAGGCCAGTAGCCTTGCTGCCTGCAACGTTTTGGCAGCCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460616.5 |
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| CDS CCA 72 bp | AAGAGCGAACTGGGGACAGGTGGGGGCTGGATTCACTaGACAATACATGCCAACACTTGGACCTATGACACG | + |
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Preference number: 6 (lower is better) Translates to: KSELGTGGGWIH*TIHANTWTYDT Trigger: CGTGTCATAGGTCCAAGTGTTGGCATGTATTGTCCAGTGAATCCAGCCCCCACCTGTCCCCAGTTCGCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CAA 72 bp | CAAATTTCTCCACGGTTTCCTCTCTCGTGGACCGCTTaGCCACCTATCCCGGTGGCAAAGAACCGGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: QISPRFPLSWTA*PPIPVAKNRTL Trigger: CAAAGTCCGGTTCTTTGCCACCGGGATAGGTGGCAAAGCGGTCCACGAGAGAGGAAACCGTGGAGAAATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CAA 72 bp | TGCCCTGATCTCTCCGGCACCCCAAGAGTTGGAATCTaGATTCTCCCTCTATCGACACAGGTCCCCCATCAA | + |
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Preference number: 6 (lower is better) Translates to: CPDLSGTPRVGI*ILPLSTQVPHQ Trigger: TTGATGGGGGACCTGTGTCGATAGAGGGAGAATCAAGATTCCAACTCTTGGGGTGCCGGAGAGATCAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS GCA 72 bp | GGATATGCGAGACAGATCCAAGTGCTCGGTCACAAATaGAATGGCAACGTAGGCGGGATGGCTGTGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GYARQIQVLGHK*NGNVGGMAVKE Trigger: TTCCTTCACAGCCATCCCGCCTACGTTGCCATTGCATTTGTGACCGAGCACTTGGATCTGTCTCGCATATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000460616.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS CAA 72 bp | CGGGGGTTTTGCTTCTGCTCTTCTCCGTGTGCGGTCTaGCGTATTCAGGTCCGAGTCTTCTTTCCTTACACT | + |
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Preference number: 6 (lower is better) Translates to: RGFCFCSSPCAV*RIQVRVFFPYT Trigger: AGTGTAAGGAAAGAAGACTCGGACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CAA 72 bp | ATAACGCCCCACATCCTGGCCTCGAGTGACAGGGAATaGTTTTCCACCGACGTCAGCATAGAGAGCCATGTT | + |
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Preference number: 6 (lower is better) Translates to: ITPHILASSDRE*FSTDVSIESHV Trigger: AACATGGCTCTCTATGCTGACGTCGGTGGAAAACAATTCCCTGTCACTCGAGGCCAGGATGTGGGGCGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000320857.7 ENST00000370086.8 ENST00000370087.5 ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000485612.5 ENST00000486204.5 |
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| CDS CAA 72 bp | TGTCTGAAACCCCACTGTCTCACCTGGACCCTGTTCTaGCATGTCAGGGAGATCTCCACAATGAAGACGGTC | + |
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Preference number: 6 (lower is better) Translates to: CLKPHCLTWTLF*HVREISTMKTV Trigger: GACCGTCTTCATTGTGGAGATCTCCCTGACATGCAAGAACAGGGTCCAGGTGAGACAGTGGGGTTTCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482902.5 |
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| CDS TCA 72 bp | AAAGGAAAGGAAGGCTGCCGCCTACATCAGAGGGTGTaGAACAAAGGCTCCCCAAAGTGGGAATGTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: KGKEGCRLHQRV*NKGSPKWECSQ Trigger: CTGAGAACATTCCCACTTTGGGGAGCCTTTGTTTCACACCCTCTGATGTAGGCGGCAGCCTTCCTTTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000460616.5 ENST00000471880.5 ENST00000482902.5 ENST00000491833.5 |
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| CDS GCA 72 bp | GGGGGTTTTGCTTCTGCTCTTCTCCGTGTGCGGTCTTaGGTATTCAGGTCCGAGTCTTCTTTCCTTACACTT | + |
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Preference number: 6 (lower is better) Translates to: GGFASALLRVRS*VFRSESSFLTL Trigger: AAGTGTAAGGAAAGAAGACTCGGACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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| CDS CAA 90 bp | CTGAGGCTGCGGGGGTTTTGCTTCTGCTCTTCTCCGTGTGCGGTCTaGCGTATTCAGGTCCGAGTCTTCTTTCCTTACACTTATTTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LRLRGFCFCSSPCAV*RIQVRVFFPYTYLR Trigger: TCTTAAATAAGTGTAAGGAAAGAAGACTCGGACCTGAATACGCAAGACCGCACACGGAGAAGAGCAGAAGCAAAACCCCCGCAGCCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320857.7 |
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