Pregenerated sensors for SSR3 (Homo sapiens)
Ensembl gene IDs: ENSG00000114850Ensembl transcript IDs: ENST00000265044.7, ENST00000463503.5, ENST00000467789.5, ENST00000478842.5
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGGGCAGGCAGGAAGGCACAGCAGGTACATACTGGCAGAGGCCTaGTGTCTGCCCTTTACTGTAACTGCTCAATGCCTTTCATTGCCT | + |
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Preference number: 1 (lower is better) Translates to: IGQAGRHSRYILAEA*CLPFTVTAQCLSLP Trigger: AGGCAATGAAAGGCATTGAGCAGTTACAGTAAAGGGCAGACATCAGGCCTCTGCCAGTATGTACCTGCTGTGCCTTCCTGCCTGCCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR CCA 90 bp | TGGAACAGTGTGTTCTTTAACCTCGTAGGACAACTCTCATATGCCTaGGCACTATTTTTAGGTTACTACCTTGGCTGCCCTTCTTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: WNSVFFNLVGQLSYA*ALFLGYYLGCPSLR Trigger: TCTTAAAGAAGGGCAGCCAAGGTAGTAACCTAAAAATAGTGCCCAGGCATATGAGAGTTGTCCTACGAGGTTAAAGAACACACTGTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR TCA 90 bp | AAAAATAATAAACCTCTAAAGTGTTACCCTAACTGTACCTTACAGTaGTATGTGACTTCTCTAGTCACTCCACATTATCCAGTGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: KNNKPLKCYPNCTLQ*YVTSLVTPHYPVMA Trigger: TGCCATCACTGGATAATGTGGAGTGACTAGAGAAGTCACATATCACTGTAAGGTACAGTTAGGGTAACACTTTAGAGGTTTATTATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGATGGCAGGGTCAAGTTaGCCTCCCTGGCCACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEMAGSS*PPWPLR Trigger: CCTGAGTGGCCAGGGAGGTCAACTTGACCCTGCCAT...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR GCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGATGGAGTCTCACCCTTaGCACCCAGGCAGTAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEMESHP*HPGSSS Trigger: GCTACTACTGCCTGGGTGGCAAGGGTGAGACTCCAT...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGATACTGGCAGAGGCCTaGTGTCTGCCCTTTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEILAEA*CLPFTV Trigger: TACAGTAAAGGGCAGACATCAGGCCTCTGCCAGTAT...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR CCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGTTCCAAGTTCTTGCATaGAGCCCAACACATCCGATA | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEFQVLA*SPTHPI Trigger: TATCGGATGTGTTGGGCTCCATGCAAGAACTTGGAA...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR TCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTAACGTCCTAGTACTCTaGGTTTCCCTTTCAATTCAT | + |
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Preference number: 2 (lower is better) Translates to: NSSAQVTVTSDRSRKQVINVLVL*VSLSIH Trigger: ATGAATTGAAAGGGAAACTCAGAGTACTAGGACGTT...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265044.7 ENST00000467789.5 |
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| 3UTR-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGCTCCACATTATCCAGTaGTGGCACCTAGATAATAAT | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKELHIIQ*WHLDNN Trigger: ATTATTATCTAGGTGCCATCACTGGATAATGTGGAG...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR GCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGGATACACAAATTCCATaGCACCAGTCAAACTATGGT | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEDTQIP*HQSNYG Trigger: ACCATAGTTTGACTGGTGGCATGGAATTTGTGTATC...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR GCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGACTGTAACTGCTCAATaGCTTTCATTGCCTCACATA | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKETVTAQ*LSLPHI Trigger: TATGTGAGGCAATGAAAGGCATTGAGCAGTTACAGT...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR CCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGCAACTCTCATATGCCTaGGCACTATTTTTAGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEQLSYA*ALFLGY Trigger: GTAACCTAAAAATAGTGCCCAGGCATATGAGAGTTG...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACAGCCAAAGCCATACAGTaGAACAGTGTGTTCTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTAKAIQ*NSVFFN Trigger: GTTAAAGAACACACTGTTCCACTGTATGGCTTTGGC...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACAAACGTCCTAGTACTCTaGGTTTCCCTTTCAATTCAT | + |
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Preference number: 2 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTNVLVL*VSLSIH Trigger: ATGAATTGAAAGGGAAACTCAGAGTACTAGGACGTT...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGAACTGCTATCACCTGTaGTTTCATATCCTTTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKENCYHL*FHILLA Trigger: AGCTAAAAGGATATGAAATCACAGGTGATAGCAGTT...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR GCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGGAAGTTGTAATATTGTaGTTGGAACACAGAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEEVVIL*LEHREP Trigger: TGGTTCTCTGTGTTCCAAGCACAATATTACAACTTC...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACATTTAGGTTACTACCTTaGCTGCCCTTCTTTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTFRLLP*LPFFKK Trigger: TTTCTTAAAGAAGGGCAGCCAAGGTAGTAACCTAAA...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR GCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTAGGACAACTCTCATATaGCTGGGCACTATTTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCRTTLI*LGTIFR Trigger: CCTAAAAATAGTGCCCAGGCATATGAGAGTTGTCCT...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR GCA 72 bp | GGCAGTAGTAGCACGATCTCGACTCACCGCAACCTCTaGCTCCTGGGTTCAGGCAGTTCTCCTGCTTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GSSSTISTHRNL*LLGSGSSPASA Trigger: GGCTGAAGCAGGAGAACTGCCTGAACCCAGGAGGCAGAGGTTGCGGTGAGTCGAGATCGTGCTACTACTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR TCA 72 bp | GCAGGAAGGCACAGCAGGTACATACTGGCAGAGGCCTaGTGTCTGCCCTTTACTGTAACTGCTCAATGCCTT | + |
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Preference number: 3 (lower is better) Translates to: AGRHSRYILAEA*CLPFTVTAQCL Trigger: AAGGCATTGAGCAGTTACAGTAAAGGGCAGACATCAGGCCTCTGCCAGTATGTACCTGCTGTGCCTTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACACATGGCAGGGTCAAGTaGACCTCCCTGGCCACTCAG | + |
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Preference number: 3 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTHGRVK*TSLATQ Trigger: CTGAGTGGCCAGGGAGGTCAACTTGACCCTGCCATG...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR CCA 72 bp | ATGCATTCCTGCCTGTTTTTCTTCCAAGTTCTTGCATaGAGCCCAACACATCCGATAGCATGGAAGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: MHSCLFFFQVLA*SPTHPIAWKWK Trigger: CTTCCACTTCCATGCTATCGGATGTGTTGGGCTCCATGCAAGAACTTGGAAGAAAAACAGGCAGGAATGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR GCA 72 bp | ACTGGCAGAGGCCTGATGTCTGCCCTTTACTGTAACTaGTCAATGCCTTTCATTGCCTCACATACATTTGAT | + |
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Preference number: 3 (lower is better) Translates to: TGRGLMSALYCN*SMPFIASHTFD Trigger: ATCAAATGTATGTGAGGCAATGAAAGGCATTGAGCAGTTACAGTAAAGGGCAGACATCAGGCCTCTGCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR CCA 72 bp | GTGTTCTTTAACCTCGTAGGACAACTCTCATATGCCTaGGCACTATTTTTAGGTTACTACCTTGGCTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: VFFNLVGQLSYA*ALFLGYYLGCP Trigger: AGGGCAGCCAAGGTAGTAACCTAAAAATAGTGCCCAGGCATATGAGAGTTGTCCTACGAGGTTAAAGAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR TCA 72 bp | ACAAAAATTCTACAGCATGGTTTTACTAAGTCAGATTaGGTAGGTCGCATCTCTGTGTGCCACACAGAACTT | + |
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Preference number: 3 (lower is better) Translates to: TKILQHGFTKSD*VGRISVCHTEL Trigger: AAGTTCTGTGTGGCACACAGAGATGCGACCTACTCAATCTGACTTAGTAAAACCATGCTGTAGAATTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR-3UTR CAA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTGTTGTAATATTGTGCTaGGAACACAGAGAACCAGTT | + |
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Preference number: 3 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCVVILC*EHREPV Trigger: AACTGGTTCTCTGTGTTCCAAGCACAATATTACAAC...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR TCA 72 bp | AAACCTCTAAAGTGTTACCCTAACTGTACCTTACAGTaGTATGTGACTTCTCTAGTCACTCCACATTATCCA | + |
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Preference number: 3 (lower is better) Translates to: KPLKCYPNCTLQ*YVTSLVTPHYP Trigger: TGGATAATGTGGAGTGACTAGAGAAGTCACATATCACTGTAAGGTACAGTTAGGGTAACACTTTAGAGGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR TCA 72 bp | ATTAATTCAAGAGAAACTATATTAGGAATATTCGGCTaGTACCCCTATTTCACCACCTCATCTAAGCTACAC | + |
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Preference number: 3 (lower is better) Translates to: INSRETILGIFG*YPYFTTSSKLH Trigger: GTGTAGCTTAGATGAGGTGGTGAAATAGGGGTATCAGCCGAATATTCCTAATATAGTTTCTCTTGAATTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACAGGCAGGAGAATGGCGTaGACCTGGGAGGCGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTGRRMA*TWEAEL Trigger: GAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCC...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTGAGCCATGGCGGAGCTaGAGGCGAGAACAGGGAACG | + |
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Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIEPWRS*RREQGT Trigger: CGTTCCCTGTTCTCGCCTGCAGCTCCGCCATGGCTC...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467789.5 |
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| CDS-3UTR CCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTGCAACCTCTGCCTCCTaGGTTCAGGCAGTTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIATSAS*VQAVLL Trigger: CAGGAGAACTGCCTGAACCCAGGAGGCAGAGGTTGC...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTCGGCCCAGGTTACTGTaGCCTCTGACAGATCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIRPRLL*PLTDQG Trigger: TCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCG...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265044.7 ENST00000467789.5 |
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| CDS-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGCATTCCTCCAGGGTGTaGGACCCTGGTCAAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEHSSRV*DPGQGK Trigger: TTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATG...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGCTCCAGAAGCAGCAGTaGCTGGCATGCACACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKELQKQQ*LACTLK Trigger: TTTCAGTGTGCATGCCAGTCACTGCTGCTTCTGGAG...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGTGTACCAAACCTGCATaGTCAGCACATGTATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKECTKPA*SAHVSQ Trigger: CTGGGATACATGTGCTGACCATGCAGGTTTGGTACA...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTGGTTACTGTGACCTCTaGCAGATCAAGGAAACAAGT | + |
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Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIGYCDL*QIKETS Trigger: ACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACC...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265044.7 ENST00000467789.5 |
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| CDS-3UTR GCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGATCCTCCCTCTTCTGTaGTACTTTGTGCTTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEILPLL*YFVLEN Trigger: GTTCTCAAGCACAAAGTAGCACAGAAGAGGGAGGAT...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTATCCTCCCTCTTCTGTaGTACTTTGTGCTTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIILPLL*YFVLEN Trigger: GTTCTCAAGCACAAAGTAGCACAGAAGAGGGAGGAT...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265044.7 ENST00000467789.5 |
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| CDS-3UTR GCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTATGGAGTCTCACCCTTaGCACCCAGGCAGTAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCMESHP*HPGSSS Trigger: GCTACTACTGCCTGGGTGGCAAGGGTGAGACTCCAT...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACACAGGGTGTGAGACCCTaGTCAAGGAAAACAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTQGVRP*SRKTVI Trigger: AATCACTGTTTTCCTTGACCAGGGTCTCACACCCTG...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTTTCCAAGTTCTTGCATaGAGCCCAACACATCCGATA | + |
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Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIFQVLA*SPTHPI Trigger: TATCGGATGTGTTGGGCTCCATGCAAGAACTTGGAA...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACAGGGGTTTCACCATGTTaGCCAGGAGTTCAAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTGVSPC*PGVQEK Trigger: CTTTTCTTGAACTCCTGGCCAACATGGTGAAACCCC...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTGGCATACACAAGAAATaGTATCTGTACATACACGGG | + |
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Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIGIHKK*YLYIHG Trigger: CCCGTGTATGTACAGATATCATTTCTTGTGTATGCC...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGTTTACTAAGTCAGATTaGGTAGGTCGCATCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEFTKSD*VGRISV Trigger: CACAGAGATGCGACCTACTCAATCTGACTTAGTAAA...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACAGACTGGCATGCACACTaGAAACAAAGAAATAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTDWHAH*KQRNRA Trigger: TGCCCTATTTCTTTGTTTTCAGTGTGCATGCCAGTC...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTCATCTATACAGGCACTaGCATCTAGTGGCAAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIHLYRH*HLVASF Trigger: AAAACTTGCCACTAGATGGCAGTGCCTGTATAGATG...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTACACATCCGATAGCATaGAAGTGGAAGTTAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVITHPIA*KWKLNS Trigger: GGAGTTTAACTTCCACTTCCATGCTATCGGATGTGT...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGAACGTCCTAGTACTCTaGGTTTCCCTTTCAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKENVLVL*VSLSIH Trigger: ATGAATTGAAAGGGAAACTCAGAGTACTAGGACGTT...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGCTCATGGAAAAATGCTaGCAAGCACTAAAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKELMEKC*QALKSL Trigger: CAGTGATTTTAGTGCTTGTCAGCATTTTTCCATGAG...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTCTCCACATTATCCAGTaGTGGCACCTAGATAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVILHIIQ*WHLDNN Trigger: ATTATTATCTAGGTGCCATCACTGGATAATGTGGAG...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTGATACACAAATTCCATaGCACCAGTCAAACTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIDTQIP*HQSNYG Trigger: ACCATAGTTTGACTGGTGGCATGGAATTTGTGTATC...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACAGGACTATATTTCCTTTaGGGTGCTGCTTGTAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTGLYFL*GAACRK Trigger: TTTCCTACAAGCAGCACCCCAAAGGAAATATAGTCC...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTGAAGTTGTAATATTGTaGTTGGAACACAGAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIEVVIL*LEHREP Trigger: TGGTTCTCTGTGTTCCAAGCACAATATTACAACTTC...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTGGTCGCATCTCTGTGTaGCACACAGAACTTTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCGRISV*HTELLD Trigger: GTCTAAAAGTTCTGTGTGGCACACAGAGATGCGACC...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACAACTGTAACTGCTCAATaGCTTTCATTGCCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTTVTAQ*LSLPHI Trigger: TATGTGAGGCAATGAAAGGCATTGAGCAGTTACAGT...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGTTTAGGTTACTACCTTaGCTGCCCTTCTTTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEFRLLP*LPFFKK Trigger: TTTCTTAAAGAAGGGCAGCCAAGGTAGTAACCTAAA...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTGGTTACTGTGACCTCTaGCAGATCAAGGAAACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCGYCDL*QIKETS Trigger: ACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACC...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTTTAGGAATATTCGGCTaGTACCCCTATTTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCLGIFG*YPYFTT Trigger: GGTGGTGAAATAGGGGTATCAGCCGAATATTCCTAA...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACATGCCTCACATACATTTaGTTGGTAACTACAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTCLTYI*LVTTKM Trigger: CATCTTTGTAGTTACCAATCAAATGTATGTGAGGCA...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGTTCTGTGCTACTTTGTaGTTGAGAACAAATTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEFCATL*LRTNFT Trigger: TGTGAAATTTGTTCTCAAGCACAAAGTAGCACAGAA...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTTTCTGTGCTACTTTGTaGTTGAGAACAAATTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIFCATL*LRTNFT Trigger: TGTGAAATTTGTTCTCAAGCACAAAGTAGCACAGAA...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000265044.7 ENST00000467789.5 |
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| CDS-3UTR GCA 90 bp | TCTTTCTCTTACTTAACATTCCTCCAGGGTGTGAGACCCTGGTCAAGGAAAACACTTTTATTTCATGGGTaGTGGGTATGTGGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSYLTFLQGVRPWSRKTLLFHG*WVCGLF Trigger: AAAAAGACCACATACCCAGCACCCATGAAATAAAAG...TGTTTTCCTTGACCAGGGTCTCACACCCTGGAGGAATGTTAAGTAAGAGAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR GCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTGCCCTTTACTGTAACTaGTCAATGCCTTTCATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCALYCN*SMPFIA Trigger: GGCAATGAAAGGCATTGAGCAGTTACAGTAAAGGGC...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTCAGAAAATGATGATCTaGGTCATTATGCAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIQKMMI*VIMQMH Trigger: ATGCATTTGCATAATGACCCAGATCATCATTTTCTG...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR CAA 72 bp | AATAATATGGCAAATAGGACAACCAGTAAACTTTTATaGCTTAAGAATATCAATCTAGGCCGGGCGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NNMANRTTSKLL*LKNINLGRARW Trigger: CCACCGCGCCCGGCCTAGATTGATATTCTTAAGCAATAAAAGTTTACTGGTTGTCCTATTTGCCATATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTCTTGTAGGAAATTACTaGATGACAACTGCTATCACC | + |
|
Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCLVGNY*MTTAIT Trigger: GGTGATAGCAGTTGTCATTCAGTAATTTCCTACAAG...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR TCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTAACTGTACCTTACAGTaGTATGTGACTTCTCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCNCTLQ*YVTSLV Trigger: GACTAGAGAAGTCACATATCACTGTAAGGTACAGTT...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTCAACTCTCATATGCCTaGGCACTATTTTTAGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCQLSYA*ALFLGY Trigger: GTAACCTAAAAATAGTGCCCAGGCATATGAGAGTTG...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR CAA 72 bp | TGTCTGCCCTTTACTGTAACTGCTCAATGCCTTTCATaGCCTCACATACATTTGATTGGTAACTACAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLPFTVTAQCLS*PHIHLIGNYKD Trigger: ATCTTTGTAGTTACCAATCAAATGTATGTGAGGCAATGAAAGGCATTGAGCAGTTACAGTAAAGGGCAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CCA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTTTATTTCATGGGTGCTaGGTATGTGGTCTTTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCLFHGC*VCGLFK Trigger: CTTAAAAAGACCACATACCCAGCACCCATGAAATAA...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR CAA 72 bp | GTAACTGCTCAATGCCTTTCATTGCCTCACATACATTaGATTGGTAACTACAAAGATGTGCATTTACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTAQCLSLPHIH*IGNYKDVHLHV Trigger: CACATGTAAATGCACATCTTTGTAGTTACCAATCAAATGTATGTGAGGCAATGAAAGGCATTGAGCAGTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| 3UTR CAA 72 bp | AAAATGCTGACAAGCACTAAAATCACTGTAAATTCCTaGGAGAGTTCTCAGAATTGCAGAAGTTCAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KMLTSTKITVNS*ESSQNCRSSEK Trigger: TTTTTCTGAACTTCTGCAATTCTGAGAACTCTCCAAGGAATTTACAGTGATTTTAGTGCTTGTCAGCATTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS CCA 90 bp | TGTGCTACTCAGATGCCCACTTGTGAGGGCTTCCCGATACACAGATaGCCATGCCTCACAGGAAACAGTCCCATACAGTGGAGGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CATQMPTCEGFPIHR*PCLTGNSPIQWRPT Trigger: TGTGGGCCTCCACTGTATGGGACTGTTTCCTGTGAGGCATGGCCATCTGTGTATCGGGAAGCCCTCACAAGTGGGCATCTGAGTAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478842.5 |
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| CDS-3UTR CAA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGAAGAGCGCGGAGGACTaGGCCGAGAGATTGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEKSAED*AERLRL Trigger: CAGCCGCAATCTCTCGGCCAAGTCCTCCGCGCTCTT...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CAA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTAAGAGCGCGGAGGACTaGGCCGAGAGATTGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIKSAED*AERLRL Trigger: CAGCCGCAATCTCTCGGCCAAGTCCTCCGCGCTCTT...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265044.7 ENST00000467789.5 |
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| CDS-3UTR CAA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTCATGGCAGGGTCAAGTaGACCTCCCTGGCCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIHGRVK*TSLATQ Trigger: CTGAGTGGCCAGGGAGGTCAACTTGACCCTGCCATG...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS GCA 90 bp | CATATTCGCCAGTATAACCTTTTAACAAGTGACCTCCCCGAGTGCTaGACAGGACAATCCCAAGCGACAACACTGTGCCCAAAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HIRQYNLLTSDLPEC*TGQSQATTLCPKKR Trigger: CCTCTTCTTTGGGCACAGTGTTGTCGCTTGGGATTGTCCTGTGCAGCACTCGGGGAGGTCACTTGTTAAAAGGTTATACTGGCGAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463503.5 |
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| CDS-3UTR CAA 90 bp | GACCCTCCTAATCTATTAATTCCTCTGCTTGGGAGTCCCAAGGAAGTGAAAGAGCACGCCTGGCTAATTTaGGTATTTTTAGTAGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: DPPNLLIPLLGSPKEVKEHAWLI*VFLVET Trigger: CGTCTCTACTAAAAATACCAAAATTAGCCAGGCGTG...CTCTTTCACTTCCTTGGGACTCCCAAGCAGAGGAATTAATAGATTAGGAGGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS-3UTR CAA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTCTCTTCTGTGCTACTTaGTGCTTGAGAACAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSSAQVTVTSDRSRKQVILFCAT*CLRTNF Trigger: GAAATTTGTTCTCAAGCACAAAGTAGCACAGAAGAG...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265044.7 ENST00000467789.5 |
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| CDS-3UTR CAA 90 bp | TGTCAATATTCAGGAAAGAGGTTCTTTCTCTTACTTAACATTCCTCCAGGGTGTCGGGGTTTCACCATGTaGGCCAGGAGTTCAAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CQYSGKRFFLLLNIPPGCRGFTM*ARSSRK Trigger: TTTTCTTGAACTCCTGGCCAACATGGTGAAACCCCG...ACACCCTGGAGGAATGTTAAGTAAGAGAAAGAACCTCTTTCCTGAATATTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265044.7 |
||
| CDS-3UTR CAA 90 bp | AACAGCTCGGCCCAGGTTACTGTGACCTCTGACAGATCAAGGAAACAAGTTATTGCTCAATGCCTTTCATaGCCTCACATACATTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: NSSAQVTVTSDRSRKQVIAQCLS*PHIHLI Trigger: AATCAAATGTATGTGAGGCAATGAAAGGCATTGAGC...AATAACTTGTTTCCTTGATCTGTCAGAGGTCACAGTAACCTGGGCCGAGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265044.7 |
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| CDS GCA 72 bp | CCCACTTGTGAGGGCTTCCCGATACACAGATGGCCATaGCTCACAGGAAACAGTCCCATACAGTGGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PTCEGFPIHRWP*LTGNSPIQWRP Trigger: GGGCCTCCACTGTATGGGACTGTTTCCTGTGAGGCATGGCCATCTGTGTATCGGGAAGCCCTCACAAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478842.5 |
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| CDS TCA 72 bp | CTCACAGGAAACAGTCCCATACAGTGGAGGCCCACATaGGCTGAATCCTGGAATAGCAGCTGGTTGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LTGNSPIQWRPT*AESWNSSWLRG Trigger: GCCCCTCAACCAGCTGCTATTCCAGGATTCAGCTCATGTGGGCCTCCACTGTATGGGACTGTTTCCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478842.5 |
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| CDS TCA 72 bp | ATCCTCCCTCTTCTGTGCTACTCAGATGCCCACTTGTaGGGGCTTCCCGATACACAGATGGCCATGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ILPLLCYSDAHL*GLPDTQMAMPH Trigger: GTGAGGCATGGCCATCTGTGTATCGGGAAGCCCTCACAAGTGGGCATCTGAGTAGCACAGAAGAGGGAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478842.5 |
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| CDS GCA 72 bp | CAGTATAACCTTTTAACAAGTGACCTCCCCGAGTGCTaGACAGGACAATCCCAAGCGACAACACTGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QYNLLTSDLPEC*TGQSQATTLCP Trigger: TGGGCACAGTGTTGTCGCTTGGGATTGTCCTGTGCAGCACTCGGGGAGGTCACTTGTTAAAAGGTTATACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463503.5 |
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