Pregenerated sensors for SSNA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176101Ensembl transcript IDs: ENST00000322310.10, ENST00000459860.1, ENST00000463511.1, ENST00000464553.2
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTCGCCCTGCTGGGTCATaGTCAACGCCGCCCGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLARPAGS*STPPGA Trigger: GGCCCCGGGCGGCGTTGACCATGACCCAGCAGGGCG...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACAAGCGCCGCGCCCTGCTaGGTCATGGTCAACGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTSAAPC*VMVNAA Trigger: GGCGGCGTTGACCATGACCCAGCAGGGCGCGGCGCT...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACAGCGAGGACCCCCGGGTaGGCTGTGCCCTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTARTPG*AVPWAC Trigger: ACAAGCCCAGGGCACAGCCCACCCGGGGGTCCTCGC...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACATGCAGCGCCGCGCCCTaGTGGGTCATGGTCAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTCSAAP*WVMVNA Trigger: GGCGTTGACCATGACCCAGCAGGGCGCGGCGCTGCA...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTGTGGAGGCTGGCACCTaGCCCTCTCGGCACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLAVEAGT*PSRHLR Trigger: TCTCAGGTGCCGAGAGGGGCAGGTGCCAGCCTCCAC...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACAGTGGAGGCTGGCACCTaGCCCTCTCGGCACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTVEAGT*PSRHLR Trigger: TCTCAGGTGCCGAGAGGGGCAGGTGCCAGCCTCCAC...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTAGGGGGCCCCCATGGTaGTCAGACAACCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLARGPPW*SDNQSL Trigger: GAGGCTCTGGTTGTCTGAGCACCATGGGGGCCCCCT...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACAGGCAGGGCAGGAGTGTaGGTGCCACAGAGACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTGRAGV*VPQRQA Trigger: GGCTTGTCTCTGTGGCACCCACACTCCTGCCCTGCC...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTGGCAGGGCAGGAGTGTaGGTGCCACAGAGACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLAGRAGV*VPQRQA Trigger: GGCTTGTCTCTGTGGCACCCACACTCCTGCCCTGCC...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACAGTGAGGGGGCCCCCATaGTGCTCAGACAACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTVRGPP*CSDNQS Trigger: GCTCTGGTTGTCTGAGCACCATGGGGGCCCCCTCAC...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTGTGAGGGGGCCCCCATaGTGCTCAGACAACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLAVRGPP*CSDNQS Trigger: GCTCTGGTTGTCTGAGCACCATGGGGGCCCCCTCAC...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTAGCTCTCCAGGATCTTaGGGTAGGCGGCCTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLASSPGS*GRRPPS Trigger: AGACGGAGGCCGCCTACCTCAAGATCCTGGAGAGCT...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322310.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACATCCGGTCGAACTCGTTaGGAGAGGCAATCTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTSGRTR*ERQSCV Trigger: CACGCAAGATTGCCTCTCGCAACGAGTTCGACCGGA...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322310.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACATCCAGGATCTCATTCTaGAGCCGCTGCTTCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTSRISF*SRCFSS Trigger: GGACGAGAAGCAGCGGCTGCAGAATGAGATCCTGGA...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464553.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTAGAACAAAGATGCTCTaGGCACACACTTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLARTKML*AHTCWG Trigger: GCCCCAGCAAGTGTGTGCTCAGAGCATCTTTGTTCT...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACAGCTCCTCTATGCACTTaGCCAGCTCGTTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTAPLCT*PARCCS Trigger: ACTACAACAACGAGCTGGTCAAGTGCATAGAGGAGC...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTAGGGAAGGTAGCTGCTaGCGTGAAGAACAAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLAREGSC*REEQRC Trigger: GCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACAGTGAGGGAAGGTAGCTaGTGCCGTGAAGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTVREGS*CREEQR Trigger: TCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCAC...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTGTGAGGGAAGGTAGCTaGTGCCGTGAAGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLAVREGS*CREEQR Trigger: TCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCAC...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACGTGAAGAACAAAGATaGTCTGAGCACACACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSCCREEQRCSEHTREEQR*SEHTLA Trigger: AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACG...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTCGTGAAGAACAAAGATaGTCTGAGCACACACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: REGSCCREEQRCSEHTLAREEQR*SEHTLA Trigger: AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACG...AGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322310.10 ENST00000464553.2 |
||
| CDS GCA 90 bp | CGGACACCCGGCCTCCGGCACGGAGGGCTCTGCTCAGCCGCGCGATaGCCGCAGCGAGGCGGGTCCAGGGGCACCCCGCTGCGAGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTPGLRHGGLCSAAR*PQRGGSRGTPLRAG Trigger: CCCGGCTCGCAGCGGGGTGCCCCTGGACCCGCCTCGCTGCGGGCATCGCGCGGCTGAGCAGAGCCCTCCGTGCCGGAGGCCGGGTGTCCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000459860.1 ENST00000463511.1 |
||
| CDS GCA 90 bp | CGAGGGCTCGGGCCACGGACACCCGGCCTCCGGCACGGAGGGCTCTaGTCAGCCGCGCGATGCCCGCAGCGAGGCGGGTCCAGGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGLGPRTPGLRHGGL*SAARCPQRGGSRGT Trigger: GGTGCCCCTGGACCCGCCTCGCTGCGGGCATCGCGCGGCTGAGCAGAGCCCTCCGTGCCGGAGGCCGGGTGTCCGTGGCCCGAGCCCTCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000459860.1 ENST00000463511.1 |
||
| CDS GCA 90 bp | GGAAGCCAGAGTCAGGCACCACCCCCGAGCGCCCGGCGCGGGGCCTaGGAGCCAGCGAGGGCTCGGGCCACGGACACCCGGCCTCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSQSQAPPPSARRGA*EPARARATDTRPPA Trigger: TGCCGGAGGCCGGGTGTCCGTGGCCCGAGCCCTCGCTGGCTCGCAGGCCCCGCGCCGGGCGCTCGGGGGTGGTGCCTGACTCTGGCTTCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000459860.1 ENST00000463511.1 |
||
| CDS CCA 90 bp | CTGGCACAGCTCCTCTATGCCTGGGGGCCGGGAGGGGCGGCGCTGTaGGCCCAGGGCAGGAGCGCGGCGGCGGAGGGCGGGCCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAQLLYAWGPGGAAL*AQGRSAAAEGGPPS Trigger: GGAAGGAGGCCCGCCCTCCGCCGCCGCGCTCCTGCCCTGGGCCCACAGCGCCGCCCCTCCCGGCCCCCAGGCATAGAGGAGCTGTGCCAG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000459860.1 ENST00000463511.1 |
||
| CDS-3UTR CAA 90 bp | ACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACAGTCCGGTCGAACTCGTaGCGAGAGGCAATCTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TVREGSCCREEQRCSEHTVRSNS*REAILR Trigger: ACGCAAGATTGCCTCTCGCAACGAGTTCGACCGGAC...TGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322310.10 |
||
| CDS GCA 72 bp | GGCCTCCGGCACGGAGGGCTCTGCTCAGCCGCGCGATaGCCGCAGCGAGGCGGGTCCAGGGGCACCCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLRHGGLCSAAR*PQRGGSRGTPL Trigger: CAGCGGGGTGCCCCTGGACCCGCCTCGCTGCGGGCATCGCGCGGCTGAGCAGAGCCCTCCGTGCCGGAGGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000459860.1 ENST00000463511.1 |
||
| CDS GCA 72 bp | GGGCCACGGACACCCGGCCTCCGGCACGGAGGGCTCTaGTCAGCCGCGCGATGCCCGCAGCGAGGCGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPRTPGLRHGGL*SAARCPQRGGS Trigger: GGACCCGCCTCGCTGCGGGCATCGCGCGGCTGAGCAGAGCCCTCCGTGCCGGAGGCCGGGTGTCCGTGGCCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000459860.1 ENST00000463511.1 |
||