Pregenerated sensors for SSMEM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165120Ensembl transcript IDs: ENST00000297819.4, ENST00000648806.1
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATCATTTGGCTTCAAGTaGAGGAAGAACGTGATAAAA | + |
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Preference number: 2 (lower is better) Translates to: VERLCCKSLLTYSSGDFSSFGFK*RKNVIK Trigger: TTTTATCACGTTCTTCCTTCACTTGAAGCCAAATGA...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTCATTGGCGGTGTTACTaGAGGCTTCTGTCGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFHWRCY*RLLSGM Trigger: CATTCCCGACAGAAGCCTTCAGTAACACCGCCAATG...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTACTGAGACTGGCGCCTaGCTCGTCTTTGTTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFTETGA*LVFVQD Trigger: ATCCTGAACAAAGACGAGCCAGGCGCCAGTCTCAGT...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTTTCTGTCGGGAATGGTaGGCCAACCATTCGTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFFCREW*ANHSLV Trigger: AACCAACGAATGGTTGGCGCACCATTCCCGACAGAA...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTGCGCCAACCATTCGTTaGTTCTCAAGGCTTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFAPTIR*FSRLCS Trigger: ACTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGC...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCAGGCTTCTGTCGGGAATaGTGCGCCAACCATTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSGFCRE*CANHSL Trigger: CAACGAATGGTTGGCGCACCATTCCCGACAGAAGCC...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAATTCACCTCATTGAACTaGGACTGGCGCCTGGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKFTSLN*DWRLAR Trigger: ACGAGCCAGGCGCCAGTCTCAGTTCAATGAGGTGAA...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTCACCTCATTGAACTaGGACTGGCGCCTGGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVFTSLN*DWRLAR Trigger: ACGAGCCAGGCGCCAGTCTCAGTTCAATGAGGTGAA...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAACCACGAGGAGGCTTCTaGGTTAGACTCTTCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKPRGGF*VRLFTA Trigger: GGCAGTGAAGAGTCTAACTCAGAAGCCTCCTCGTGG...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTCCACGAGGAGGCTTCTaGGTTAGACTCTTCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVPRGGF*VRLFTA Trigger: GGCAGTGAAGAGTCTAACTCAGAAGCCTCCTCGTGG...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTGCACTGTCTTTGCTTTaGCGCTTACAGGAAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFALSLL*RLQEVS Trigger: AGAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGC...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGCTCAAGGCTTTGCAGTaGAGGCAGTGCCTTTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: FTSWVPSMFLFVGRETLLLKALQ*RQCLSL Trigger: GAGCGAAAGGCACTGCCTCCACTGCAAAGCCTTGAG...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCAGCTTGCTTTCCTTACTaGAGTACTTGTCCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSACFPY*STCPTA Trigger: GGCAGTGGGACAAGTACTTCAGTAAGGAAAGCAAGC...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTCATTGGCGGTGTTACTaGAGGCTTCTGTCGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVHWRCY*RLLSGM Trigger: CATTCCCGACAGAAGCCTTCAGTAACACCGCCAATG...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTCCCAGGCACTGTCTTTaGTTTGCCGCTTACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVPRHCL*FAAYRK Trigger: CTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGG...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAACCCAGGCACTGTCTTTaGTTTGCCGCTTACAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKPRHCL*FAAYRK Trigger: CTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGG...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATTCTGTCGGGAATGGTaGGCCAACCATTCGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSFCREW*ANHSLV Trigger: AACCAACGAATGGTTGGCGCACCATTCCCGACAGAA...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGACTGAGACTGGCGCCTaGCTCGTCTTTGTTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FTSWVPSMFLFVGRETLLTETGA*LVFVQD Trigger: ATCCTGAACAAAGACGAGCCAGGCGCCAGTCTCAGT...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | AGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTCTCAAGGCTTTGCAGTaGAGGCAGTGCCTTTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLCCKSLLTYSSGDFSCFLKALQ*RQCLSL Trigger: GAGCGAAAGGCACTGCCTCCACTGCAAAGCCTTGAG...AAAACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCAGCGCCAACCATTCGTTaGTTCTCAAGGCTTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSAPTIR*FSRLCS Trigger: ACTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGC...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTGACCAAAGCCACTTCTaGGTTGGTTACAGGGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVDQSHF*VGYRGK Trigger: CTTACCCCTGTAACCAACTCAGAAGTGGCTTTGGTC...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCAGTTCAGGATAGGCATTaGCCAAAGCCACTTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSVQDRH*PKPLLS Trigger: ACTCAGAAGTGGCTTTGGTCAATGCCTATCCTGAAC...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTAGATTCCTTTGCCTCTaGGCCATTTTTCTCCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFRFLCL*AIFLLL Trigger: TAAGAGGAGAAAAATGGCTCAGAGGCAAAGGAATCT...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTATGGAACTTTCCTCTTaGCTGTCTCTTTTCATTGGC | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFMELSS*LSLFIG Trigger: GCCAATGAAAAGAGACAGTCAAGAGGAAAGTTCCAT...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTGGTTCTCAAGGCTTTaGAGTGGAGGCAGTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVWFSRL*SGGSAF Trigger: AAAGGCACTGCCTCCACTGCAAAGCCTTGAGAACCA...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATTGGTGTTCCAATGGTaGCATAAACACGTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSLVFQW*HKHVMA Trigger: GGCCATCACGTGTTTATGGCACCATTGGAACACCAA...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAACTGTCTGGTGATGGGTaGTGTTCACTTTCACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKLSGDG*CSLSLS Trigger: GGAGAGTGAAAGTGAACACCACCCATCACCAGACAG...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTCTGTCTGGTGATGGGTaGTGTTCACTTTCACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVLSGDG*CSLSLS Trigger: GGAGAGTGAAAGTGAACACCACCCATCACCAGACAG...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | AGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTCTGGGTTTCTGGCTGTaGACTCTAACGCGTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RLCCKSLLTYSSGDFSCFLGFWL*TLTRHL Trigger: GAGATGACGCGTTAGAGTCCACAGCCAGAAACCCAG...AAAACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTGACCAAAGCCACTTCTaGGTTGGTTACAGGGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: RLCCKSLLTYSSGDFSCFDQSHF*VGYRGK Trigger: CTTACCCCTGTAACCAACTCAGAAGTGGCTTTGGTC...AAAACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCACTTAATACTGTCTGGTaGTGGGTGGTGTTCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSLNTVW*WVVFTF Trigger: GAAAGTGAACACCACCCATCACCAGACAGTATTAAG...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTAAGTACTTGTCCCACTaGCTTCATCCTTTTTATCCT | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFKYLSH*LHPFYP Trigger: AGGATAAAAAGGATGAAGGCAGTGGGACAAGTACTT...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTTACAGGAAGTCTCTTTaGTTGCTTTCCTTACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFYRKSL*LLSLLK Trigger: CTTCAGTAAGGAAAGCAAGCAAAGAGACTTCCTGTA...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | AGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTTGGTTCTCAAGGCTTTaGAGTGGAGGCAGTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RLCCKSLLTYSSGDFSCFWFSRL*SGGSAF Trigger: AAAGGCACTGCCTCCACTGCAAAGCCTTGAGAACCA...AAAACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTGGTGTTCCAATGGTaGCATAAACACGTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVLVFQW*HKHVMA Trigger: GGCCATCACGTGTTTATGGCACCATTGGAACACCAA...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | AGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTGCAGGAAGCTCCCTATaGTTCCACAAGAGTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: RLCCKSLLTYSSGDFSCFAGSSL*FHKSHP Trigger: AGGATGACTCTTGTGGAACCATAGGGAGCTTCCTGC...AAAACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297819.4 |
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| CDS-3UTR TCA 90 bp | AGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTGTTCAGGATAGGCATTaGCCAAAGCCACTTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RLCCKSLLTYSSGDFSCFVQDRH*PKPLLS Trigger: ACTCAGAAGTGGCTTTGGTCAATGCCTATCCTGAAC...AAAACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAACTTAATACTGTCTGGTaGTGGGTGGTGTTCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKLNTVW*WVVFTF Trigger: GAAAGTGAACACCACCCATCACCAGACAGTATTAAG...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCAAGATTCCTTTGCCTCTaGGCCATTTTTCTCCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSRFLCL*AIFLLL Trigger: TAAGAGGAGAAAAATGGCTCAGAGGCAAAGGAATCT...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATCTTTGGTGTTCCAATaGTGCCATAAACACGTGATG | + |
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Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSSLVFQ*CHKHVM Trigger: CATCACGTGTTTATGGCACCATTGGAACACCAAAGA...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGATGGAACTTTCCTCTTaGCTGTCTCTTTTCATTGGC | + |
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Preference number: 4 (lower is better) Translates to: FTSWVPSMFLFVGRETLLMELSS*LSLFIG Trigger: GCCAATGAAAAGAGACAGTCAAGAGGAAAGTTCCAT...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR TCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTGCCATTGGACATACATaGTGTAATCCACTAGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVAIGHT*CNPLAY Trigger: GTAAGCTAGTGGATTACATCATGTATGTCCAATGGC...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTCTTTGGTGTTCCAATaGTGCCATAAACACGTGATG | + |
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Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVSLVFQ*CHKHVM Trigger: CATCACGTGTTTATGGCACCATTGGAACACCAAAGA...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCAGCAGATATAGATCTTTaGTGTTCCAATGGTGCCATA | + |
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Preference number: 4 (lower is better) Translates to: VERLCCKSLLTYSSGDFSADIDL*CSNGAI Trigger: TATGGCACCATTGGAACACCAAAGATCTATATCTGC...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR GCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAAAGTACTTGTCCCACTaGCTTCATCCTTTTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKKYLSH*LHPFYP Trigger: AGGATAAAAAGGATGAAGGCAGTGGGACAAGTACTT...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR GCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAATACAGGAAGTCTCTTTaGTTGCTTTCCTTACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKYRKSL*LLSLLK Trigger: CTTCAGTAAGGAAAGCAAGCAAAGAGACTTCCTGTA...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR TCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTCATTTGGCTTCAAGTaGAGGAAGAACGTGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVSFGFK*RKNVIK Trigger: TTTTATCACGTTCTTCCTTCACTTGAAGCCAAATGA...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAATCATTTGGCTTCAAGTaGAGGAAGAACGTGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKSFGFK*RKNVIK Trigger: TTTTATCACGTTCTTCCTTCACTTGAAGCCAAATGA...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CCA 90 bp | AGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTGCAGATATAGATCTTTaGTGTTCCAATGGTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RLCCKSLLTYSSGDFSCFADIDL*CSNGAI Trigger: TATGGCACCATTGGAACACCAAAGATCTATATCTGC...AAAACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CCA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTCCACTAGCTTACTGTaGCATGGCTTAATGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FTSWVPSMFLFVGRETLLSTSLL*HGLMFL Trigger: TAAAAACATTAAGCCATGCCACAGTAAGCTAGTGGA...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000648806.1 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAAATCCTGATTTGGAATaGCACAATTTACAGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: PLGFQVCFCLLVERLCCKNPDLE*HNLQVL Trigger: CAATACCTGTAAATTGTGCCATTCCAAATCAGGATT...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000297819.4 |
||
| CDS-3UTR CCA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTCATAATCCTGATTTaGAATGGCACAATTTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RDFVVKVSSPIALVIFHVFIILI*NGTIYR Trigger: CCTGTAAATTGTGCCATTCCAAATCAGGATTATGAA...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297819.4 |
||
| CDS GCA 90 bp | TCTCTTTTCATTGGCGGTGTTACTGAAGGCTTCTGTCGGGAATGGTaGGCCAACCATTCGTTGGTTCTCAAGGCTTTGCAGTGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLFIGGVTEGFCREW*ANHSLVLKALQWRQ Trigger: CTGCCTCCACTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGCACCATTCCCGACAGAAGCCTTCAGTAACACCGCCAATGAAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS CCA 90 bp | CTGTCTCTTTTCATTGGCGGTGTTACTGAAGGCTTCTGTCGGGAATaGTGCGCCAACCATTCGTTGGTTCTCAAGGCTTTGCAGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLFIGGVTEGFCRE*CANHSLVLKALQWR Trigger: CCTCCACTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGCACCATTCCCGACAGAAGCCTTCAGTAACACCGCCAATGAAAAGAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS TCA 90 bp | GGTTACAGGGGTAAGTTGGTTCTGCTTTGGTTTCTTCATTGTTTGTaGGGGATCCCAGGCACTGTCTTTGCTTTGCCGCTTACAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GYRGKLVLLWFLHCL*GIPGTVFALPLTGS Trigger: ACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGATCCCTCACAAACAATGAAGAAACCAAAGCAGAACCAACTTACCCCTGTAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS TCA 90 bp | TATGGAACTTTCCTCTTGACTGTCTCTTTTCATTGGCGGTGTTACTaGAGGCTTCTGTCGGGAATGGTGCGCCAACCATTCGTTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YGTFLLTVSFHWRCY*RLLSGMVRQPFVGS Trigger: AGAACCAACGAATGGTTGGCGCACCATTCCCGACAGAAGCCTTCAGTAACACCGCCAATGAAAAGAGACAGTCAAGAGGAAAGTTCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTGCGCCTGGCTCGTCTTaGTTCAGGATAGGCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFAPGSS*FRIGID Trigger: GTCAATGCCTATCCTGAACAAAGACGAGCCAGGCGC...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS GCA 90 bp | GCTTTGGTTTCTTCATTGTTTGTGAGGGATCCCAGGCACTGTCTTTaGTTTGCCGCTTACAGGAAGTCTCTTTGCTTGCTTTCCTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: ALVSSLFVRDPRHCL*FAAYRKSLCLLSLL Trigger: CAGTAAGGAAAGCAAGCAAAGAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGATCCCTCACAAACAATGAAGAAACCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS GCA 90 bp | TTGACCAAAGCCACTTCTGAGTTGGTTACAGGGGTAAGTTGGTTCTaGTTTGGTTTCTTCATTGTTTGTGAGGGATCCCAGGCACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTKATSELVTGVSWF*FGFFIVCEGSQALS Trigger: AGACAGTGCCTGGGATCCCTCACAAACAATGAAGAAACCAAAGCAGAACCAACTTACCCCTGTAACCAACTCAGAAGTGGCTTTGGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTTCCCAGGCACTGTCTTaGCTTTGCCGCTTACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFSQALS*LCRLQE Trigger: TTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGA...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTTGCGCCAACCATTCGTaGGTTCTCAAGGCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFCANHS*VLKALQ Trigger: CTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGCA...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS GCA 90 bp | GGTTTCTTCATTGTTTGTGAGGGATCCCAGGCACTGTCTTTGCTTTaGCGCTTACAGGAAGTCTCTTTGCTTGCTTTCCTTACTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GFFIVCEGSQALSLL*RLQEVSLLAFLTEV Trigger: TACTTCAGTAAGGAAAGCAAGCAAAGAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGATCCCTCACAAACAATGAAGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS CCA 90 bp | TATGGTTCCACAAGAGTCATCCTTCCAGCATTCATAATCCTGATTTaGAATGGCACAATTTACAGGTATTGGGGGAGGATCTACCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YGSTRVILPAFIILI*NGTIYRYWGRIYLP Trigger: TGGGAGGTAGATCCTCCCCCAATACCTGTAAATTGTGCCATTCCAAATCAGGATTATGAATGCTGGAAGGATGACTCTTGTGGAACCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297819.4 |
||
| CDS-3UTR CAA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTGCTTTGGTTTCTTCATaGTTTGTGAGGGATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFALVSS*FVRDPR Trigger: CCTGGGATCCCTCACAAACAATGAAGAAACCAAAGC...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTGCGCCTGGCTCGTCTTaGTTCAGGATAGGCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RDFVVKVSSPIALVIFHVAPGSS*FRIGID Trigger: GTCAATGCCTATCCTGAACAAAGACGAGCCAGGCGC...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCACACAATTTACAGGTATaGGGGGAGGATCTACCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VERLCCKSLLTYSSGDFSHNLQV*GEDLPP Trigger: GGGAGGTAGATCCTCCCCCAATACCTGTAAATTGTG...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000297819.4 |
||
| CDS-3UTR CAA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGGGCACTGTCTTTGCTTaGCCGCTTACAGGAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTSWVPSMFLFVGRETLLGTVFA*PLTGSL Trigger: GAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCC...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAGGCACTGTCTTTGCTTaGCCGCTTACAGGAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKGTVFA*PLTGSL Trigger: GAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCC...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTGGTTACAGGGGTAAGTaGGTTCTGCTTTGGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFGYRGK*VLLWFL Trigger: AAGAAACCAAAGCAGAACCAACTTACCCCTGTAACC...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTACTTCCCAGATTCCTTaGCCTCTGAGCCATTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFTSQIP*PLSHFS Trigger: AGAAAAATGGCTCAGAGGCAAAGGAATCTGGGAAGT...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTGCGCCAACCATTCGTaGGTTCTCAAGGCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FTSWVPSMFLFVGRETLLCANHS*VLKALQ Trigger: CTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGCA...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS CCA 90 bp | TTCCACAAGAGTCATCCTTCCAGCATTCATAATCCTGATTTGGAATaGCACAATTTACAGGTATTGGGGGAGGATCTACCTCCCAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: FHKSHPSSIHNPDLE*HNLQVLGEDLPPKI Trigger: TATTTTGGGAGGTAGATCCTCCCCCAATACCTGTAAATTGTGCCATTCCAAATCAGGATTATGAATGCTGGAAGGATGACTCTTGTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297819.4 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATCCTTACTGAAGTACTaGTCCCACTGCCTTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VERLCCKSLLTYSSGDFSSLLKY*SHCLHP Trigger: AGGATGAAGGCAGTGGGACAAGTACTTCAGTAAGGA...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCAAAAGCCACTTCTGAGTaGGTTACAGGGGTAAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VERLCCKSLLTYSSGDFSKATSE*VTGVSW Trigger: CCAACTTACCCCTGTAACCAACTCAGAAGTGGCTTT...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTCCTTACTGAAGTACTaGTCCCACTGCCTTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: FTSWVPSMFLFVGRETLLSLLKY*SHCLHP Trigger: AGGATGAAGGCAGTGGGACAAGTACTTCAGTAAGGA...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAGTGCCTTTCGCTCATTaGGTAACTTCCCAGATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKVPFAH*VTSQIP Trigger: AGGAATCTGGGAAGTTACCAAATGAGCGAAAGGCAC...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGGTGCCTTTCGCTCATTaGGTAACTTCCCAGATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FTSWVPSMFLFVGRETLLVPFAH*VTSQIP Trigger: AGGAATCTGGGAAGTTACCAAATGAGCGAAAGGCAC...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | TTTACCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGGACTGTCTCTTTTCATaGGCGGTGTTACTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTSWVPSMFLFVGRETLLDCLFS*AVLLKA Trigger: AGCCTTCAGTAACACCGCCAATGAAAAGAGACAGTC...CAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAGACTGTCTCTTTTCATaGGCGGTGTTACTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKDCLFS*AVLLKA Trigger: AGCCTTCAGTAACACCGCCAATGAAAAGAGACAGTC...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | AGCAGATATAGATCTTTGGTGTTCCAATGGTGCCATAAACACGTGATGGCCTTTTATGGAACTTTCCTCTaGACTGTCTCTTTTCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRYRSLVFQWCHKHVMAFYGTFL*TVSFHW Trigger: CCAATGAAAAGAGACAGTCAAGAGGAAAGTTCCATA...AAAGGCCATCACGTGTTTATGGCACCATTGGAACACCAAAGATCTATATCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCAAGGAAGTCTCTTTGCTaGCTTTCCTTACTGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VERLCCKSLLTYSSGDFSRKSLC*LSLLKY Trigger: GTACTTCAGTAAGGAAAGCAAGCAAAGAGACTTCCT...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAGGTTACAGGGGTAAGTaGGTTCTGCTTTGGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKGYRGK*VLLWFL Trigger: AAGAAACCAAAGCAGAACCAACTTACCCCTGTAACC...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | AGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTTTAAAGCCACTTCTGAGTaGGTTACAGGGGTAAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLCCKSLLTYSSGDFSCFKATSE*VTGVSW Trigger: CCAACTTACCCCTGTAACCAACTCAGAAGTGGCTTT...AAAACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAACTTCCCAGATTCCTTaGCCTCTGAGCCATTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKTSQIP*PLSHFS Trigger: AGAAAAATGGCTCAGAGGCAAAGGAATCTGGGAAGT...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAAGGAAGTCTCTTTGCTaGCTTTCCTTACTGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKRKSLC*LSLLKY Trigger: GTACTTCAGTAAGGAAAGCAAGCAAAGAGACTTCCT...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATTACAGGAAGTCTCTTaGCTTGCTTTCCTTACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VERLCCKSLLTYSSGDFSLQEVS*LAFLTE Trigger: TTCAGTAAGGAAAGCAAGCAAAGAGACTTCCTGTAA...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATATGGAACTTTCCTCTaGACTGTCTCTTTTCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: VERLCCKSLLTYSSGDFSYGTFL*TVSFHW Trigger: CCAATGAAAAGAGACAGTCAAGAGGAAAGTTCCATA...TGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCTCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
||
| CDS TCA 90 bp | AATTTACTAAATTTCTTGTTAATGTCAGATATGGAACTTTCCTCTTaGCTGTCTCTTTTCATTGGCGGTGTTACTGAAGGCTTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NLLNFLLMSDMELSS*LSLFIGGVTEGFCR Trigger: CCGACAGAAGCCTTCAGTAACACCGCCAATGAAAAGAGACAGTCAAGAGGAAAGTTCCATATCTGACATTAACAAGAAATTTAGTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAATTACAGGAAGTCTCTTaGCTTGCTTTCCTTACTGAA | + |
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Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKLQEVS*LAFLTE Trigger: TTCAGTAAGGAAAGCAAGCAAAGAGACTTCCTGTAA...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAGTTCCAAGTATGTTTTaGTTTGTTGGTAGAGAGACT | + |
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Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKVPSMF*FVGRET Trigger: AGTCTCTCTACCAACAAACAAAAACATACTTGGAAC...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CAA 90 bp | AGAGACTTTGTTGTAAAAGTCTCCTCACCTATAGCTCTGGTGATTTTTCATGTTGTGAGATTTTACCTCTaGGGTTCCAAGTATGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: RDFVVKVSSPIALVIFHVVRFYL*GSKYVF Trigger: AAAAACATACTTGGAACCCAAGAGGTAAAATCTCAC...AACATGAAAAATCACCAGAGCTATAGGTGAGGAGACTTTTACAACAAAGTCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS-3UTR CAA 90 bp | CCTCTTGGGTTCCAAGTATGTTTTTGTTTGTTGGTAGAGAGACTTTGTTGTAAAGAAAAACTTTGGCCATaGGACATACATGATGTAATC | + |
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Preference number: 5 (lower is better) Translates to: PLGFQVCFCLLVERLCCKEKLWP*DIHDVI Trigger: GATTACATCATGTATGTCCAATGGCCAAAGTTTTTC...TTTACAACAAAGTCTCTCTACCAACAAACAAAAACATACTTGGAACCCAAGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000648806.1 |
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| CDS CAA 72 bp | GAAGGCTTCTGTCGGGAATGGTGCGCCAACCATTCGTaGGTTCTCAAGGCTTTGCAGTGGAGGCAGTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: EGFCREWCANHS*VLKALQWRQCL Trigger: AAGGCACTGCCTCCACTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGCACCATTCCCGACAGAAGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS CCA 72 bp | AAGGCTTCTGTCGGGAATGGTGCGCCAACCATTCGTTaGTTCTCAAGGCTTTGCAGTGGAGGCAGTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: KASVGNGAPTIR*FSRLCSGGSAF Trigger: AAAGGCACTGCCTCCACTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGCACCATTCCCGACAGAAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS GCA 72 bp | ATTGGCGGTGTTACTGAAGGCTTCTGTCGGGAATGGTaGGCCAACCATTCGTTGGTTCTCAAGGCTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: IGGVTEGFCREW*ANHSLVLKALQ Trigger: CTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGCACCATTCCCGACAGAAGCCTTCAGTAACACCGCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS CCA 72 bp | TTCATTGGCGGTGTTACTGAAGGCTTCTGTCGGGAATaGTGCGCCAACCATTCGTTGGTTCTCAAGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: FIGGVTEGFCRE*CANHSLVLKAL Trigger: CAAAGCCTTGAGAACCAACGAATGGTTGGCGCACCATTCCCGACAGAAGCCTTCAGTAACACCGCCAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS TCA 72 bp | TTCCTCTTGACTGTCTCTTTTCATTGGCGGTGTTACTaGAGGCTTCTGTCGGGAATGGTGCGCCAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: FLLTVSFHWRCY*RLLSGMVRQPF Trigger: GAATGGTTGGCGCACCATTCCCGACAGAAGCCTTCAGTAACACCGCCAATGAAAAGAGACAGTCAAGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS GCA 72 bp | ATTGTTTGTGAGGGATCCCAGGCACTGTCTTTGCTTTaGCGCTTACAGGAAGTCTCTTTGCTTGCTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: IVCEGSQALSLL*RLQEVSLLAFL Trigger: AAGGAAAGCAAGCAAAGAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGATCCCTCACAAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS GCA 72 bp | TCTTCATTGTTTGTGAGGGATCCCAGGCACTGTCTTTaGTTTGCCGCTTACAGGAAGTCTCTTTGCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSLFVRDPRHCL*FAAYRKSLCLL Trigger: AAGCAAGCAAAGAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGATCCCTCACAAACAATGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS CAA 72 bp | TTCTTCATTGTTTGTGAGGGATCCCAGGCACTGTCTTaGCTTTGCCGCTTACAGGAAGTCTCTTTGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: FFIVCEGSQALS*LCRLQEVSLLA Trigger: AGCAAGCAAAGAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGATCCCTCACAAACAATGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS CAA 90 bp | CTATGGTTCCACAAGAGTCATCCTTCCAGCATTCATAATCCTGATTaGGAATGGCACAATTTACAGGTATTGGGGGAGGATCTACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LWFHKSHPSSIHNPD*EWHNLQVLGEDLPP Trigger: GGGAGGTAGATCCTCCCCCAATACCTGTAAATTGTGCCATTCCAAATCAGGATTATGAATGCTGGAAGGATGACTCTTGTGGAACCATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297819.4 |
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| CDS CAA 90 bp | TGCTTTGGTTTCTTCATTGTTTGTGAGGGATCCCAGGCACTGTCTTaGCTTTGCCGCTTACAGGAAGTCTCTTTGCTTGCTTTCCTTACT | + |
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Preference number: 6 (lower is better) Translates to: CFGFFIVCEGSQALS*LCRLQEVSLLAFLT Trigger: AGTAAGGAAAGCAAGCAAAGAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGATCCCTCACAAACAATGAAGAAACCAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS CAA 72 bp | CAGATATGGAACTTTCCTCTTGACTGTCTCTTTTCATaGGCGGTGTTACTGAAGGCTTCTGTCGGGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: QIWNFPLDCLFS*AVLLKASVGNG Trigger: ACCATTCCCGACAGAAGCCTTCAGTAACACCGCCAATGAAAAGAGACAGTCAAGAGGAAAGTTCCATATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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| CDS GCA 72 bp | CTTTGCTTGCTTTCCTTACTGAAGTACTTGTCCCACTaGCTTCATCCTTTTTATCCTCAGACATCCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: LCLLSLLKYLSH*LHPFYPQTSRQ Trigger: CTGTCTGGATGTCTGAGGATAAAAAGGATGAAGGCAGTGGGACAAGTACTTCAGTAAGGAAAGCAAGCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297819.4 |
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| CDS GCA 72 bp | CTTTGCTTGCTTTCCTTACTGAAGTACTTGTCCCACTaGCTTCATCCTTTTTATCCTCAGACATCTGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: LCLLSLLKYLSH*LHPFYPQTSAD Trigger: ATCGGCAGATGTCTGAGGATAAAAAGGATGAAGGCAGTGGGACAAGTACTTCAGTAAGGAAAGCAAGCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648806.1 |
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| CDS CCA 72 bp | AGTCATCCTTCCAGCATTCATAATCCTGATTTGGAATaGCACAATTTACAGGTATTGGGGGAGGATCTACCT | + |
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Preference number: 6 (lower is better) Translates to: SHPSSIHNPDLE*HNLQVLGEDLP Trigger: AGGTAGATCCTCCCCCAATACCTGTAAATTGTGCCATTCCAAATCAGGATTATGAATGCTGGAAGGATGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297819.4 |
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| CDS CAA 72 bp | CACAAGAGTCATCCTTCCAGCATTCATAATCCTGATTaGGAATGGCACAATTTACAGGTATTGGGGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: HKSHPSSIHNPD*EWHNLQVLGED Trigger: ATCCTCCCCCAATACCTGTAAATTGTGCCATTCCAAATCAGGATTATGAATGCTGGAAGGATGACTCTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297819.4 |
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| CDS CAA 72 bp | AGGAAGTCTCTTTGCTTGCTTTCCTTACTGAAGTACTaGTCCCACTGCCTTCATCCTTTTTATCCTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: RKSLCLLSLLKY*SHCLHPFYPQT Trigger: TGTCTGAGGATAAAAAGGATGAAGGCAGTGGGACAAGTACTTCAGTAAGGAAAGCAAGCAAAGAGACTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297819.4 ENST00000648806.1 |
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