RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SSH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000172830

Ensembl transcript IDs: ENST00000308127.9, ENST00000308298.11, ENST00000376757.9, ENST00000527821.2, ENST00000529224.1, ENST00000531495.1, ENST00000532181.5, ENST00000532600.1, ENST00000532881.5, ENST00000534112.1

Found 634 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTGGGGCCTaGGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: REAICQPFQPPAAGA*GSCLPLGATGCLAW
Trigger: CCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR CCA 90 bp GTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTaGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCT +
Preference number: 1 (lower is better)
Translates to: VDEGSDLPALPASRG*GLRILPAFGGHWLP
Trigger: AGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR CCA 90 bp TGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCC +
Preference number: 1 (lower is better)
Translates to: WCHRRSGDSSKDLDR*RWMREAICQPFQPP
Trigger: GGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR TCA 90 bp AGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTaGGGGCTCAGGCCTCGCCCTCCTCTCCACTGTCATGCACGCTGG +
Preference number: 1 (lower is better)
Translates to: RSCGSSSVSGERGHV*GLRPRPPLHCHARW
Trigger: CCAGCGTGCATGACAGTGGAGAGGAGGGCGAGGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR CCA 90 bp CTCCAGAAGACTGATGGACCTCATGACCCCTCGGAGGTTTATACGTaGCCGTGGCCCAGGCTCTTCTTTCGGGGCTGCCTGGCTCTCTTC +
Preference number: 1 (lower is better)
Translates to: LQKTDGPHDPSEVYT*PWPRLFFRGCLALF
Trigger: GAAGAGAGCCAGGCAGCCCCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAACCTCCGAGGGGTCATGAGGTCCATCAGTCTTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR GCA 90 bp TCCACCTGCTGGCCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTaGAGAGGCTCTTCATGTGAAGACTCGTGGGAAGAGAAGACCTCT +
Preference number: 1 (lower is better)
Translates to: STCWPPLVLASCGKG*RGSSCEDSWEEKTS
Trigger: AGAGGTCTTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR CCA 90 bp GACAAAAAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTaGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGG +
Preference number: 1 (lower is better)
Translates to: DKKKTISGLVPCDLA*CHRRSGDSSKDLDR
Trigger: CCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTTTTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR TCA 90 bp GGCCAGAAAGGACAAAAAGAAGACTATCTCTGGCCTGGTGCCCTGTaGTCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGA +
Preference number: 1 (lower is better)
Translates to: GQKGQKEDYLWPGAL*SGVVSQEVWGQQQR
Trigger: TCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTTTTTGTCCTTTCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR TCA 90 bp CTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCTCTTCATGTaGAGACTCGTGGGAAGAGAAGACCTCTGGCATGTCACTGGTCTC +
Preference number: 1 (lower is better)
Translates to: LGPCKLWEGLQRLFM*RLVGREDLWHVTGL
Trigger: GAGACCAGTGACATGCCAGAGGTCTTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR CCA 90 bp GAAAGGACAAAAAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTaGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGG +
Preference number: 1 (lower is better)
Translates to: ERTKRRLSLAWCPVI*RGVTGGLGTAAKTW
Trigger: CCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTTTTTGTCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR GCA 90 bp GCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTaGTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCA +
Preference number: 1 (lower is better)
Translates to: ATGECAGLELRMKLG*CCPQRYLQSLYHIP
Trigger: TGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR GCA 90 bp GGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTaGCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGA +
Preference number: 1 (lower is better)
Translates to: GECAGLELRMKLGCC*PQRYLQSLYHIPVR
Trigger: TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR TCA 90 bp GACCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTaGGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTG +
Preference number: 1 (lower is better)
Translates to: DPFCTGSSVFIPCHR*VCRARVENETRVLL
Trigger: CAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTCGGGGGTGGGAGGCGTaGCCCTTTTTGCACGGGAAG +
Preference number: 2 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPRGWEA*PFLHGK
Trigger: CTTCCCGTGCAAAAAGGGTCACGCCTCCCACCCCCG...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTGCCTTTGGGGGCCACTaGTTGCCTGGCCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: WGLRILPAFGGHWLPGLAAFGGH*LPGLAG
Trigger: ACCAGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGC...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGCCAGCCTCCCGCGGCTaGGGCCTGAGGATCCTGCCT +
Preference number: 2 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRPASRG*GLRILP
Trigger: AGGCAGGATCCTCAGGCCCCAGCCGCGGGAGGCTGG...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR CAA 90 bp CGCGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTaGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGG +
Preference number: 2 (lower is better)
Translates to: RGWGLRILPAFGGHW*PGLAGSRNELGEDR
Trigger: CCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGCCCGCGGCTGGGGCCTaGGGATCCTGCCTGCCTTTG +
Preference number: 2 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRPAAGA*GSCLPL
Trigger: CAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCGGG...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCTGCTCCTGGAAGGCCTaGGTCCGGTTGGCCACCACG +
Preference number: 2 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSCSWKA*VRLATT
Trigger: CGTGGTGGCCAACCGGACCCAGGCCTTCCAGGAGCA...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR TCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTGTGCGGCAACAGACGTaGGGGTGTTTCTCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: RWRWMREAICQPFQPPAAVRQQT*GCFSKE
Trigger: CTCCTTGGAGAAACACCCTCACGTCTGTTGCCGCAC...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGCGGGGGTGGGAGGCGTaGCCCTTTTTGCACGGGAAG +
Preference number: 2 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRRGWEA*PFLHGK
Trigger: CTTCCCGTGCAAAAAGGGTCACGCCTCCCACCCCCG...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTGGCTGGTTCCAGGAATaGACTGGGAGAGGACAGGAG +
Preference number: 2 (lower is better)
Translates to: RWRWMREAICQPFQPPAAGWFQE*TGRGQE
Trigger: CTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCC...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCCTTTGGGGGCCACTaGTTGCCTGGCCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTAFGGH*LPGLAG
Trigger: ACCAGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGC...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp AAGGCCTGGGTCCGGTTGGCCACCACGGCACTGCCCTGGAGGGTAACCACTGACCCTGCTGGCCTCCCTTaGTCCTTGCAAGCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: KAWVRLATTALPWRVTTDPAGLP*SLQAVG
Trigger: TCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGG...GTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR TCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCGTGCGGCAACAGACGTaGGGGTGTTTCTCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: PGPVEVDEGSDLPALPASVRQQT*GCFSKE
Trigger: CTCCTTGGAGAAACACCCTCACGTCTGTTGCCGCAC...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTACTGGTTGCCTGGCCTaGCTGGTTCCAGGAATGAAC +
Preference number: 2 (lower is better)
Translates to: RWRWMREAICQPFQPPAATGCLA*LVPGMN
Trigger: GTTCATTCCTGGAACCAGCCAGGCCAGGCAACCAGT...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCG +
Preference number: 2 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSKDLDR*RWMREA
Trigger: CGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTT...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTAGACTATCTCTGGCCTaGTGCCCTGTGATCTGGCGT +
Preference number: 2 (lower is better)
Translates to: WGLRILPAFGGHWLPGLARLSLA*CPVIWR
Trigger: ACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TGCAGCTGGGGGAGCTGCTGTCAGGGAAATCCACGCCCAGGAGGACCGTCTCATTCTGTCTGGTCCCCGTaGAGCTCCTCCTCACTCGGG +
Preference number: 2 (lower is better)
Translates to: CSWGSCCQGNPRPGGPSHSVWSP*SSSSLG
Trigger: CCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGA...ATGAGACGGTCCTCCTGGGCGTGGATTTCCCTGACAGCAGCTCCCCCAGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532600.1
3UTR-3UTR TCA 90 bp TCATGCACGCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCGGGGGTGGGAGGCGTaGCCCTTTTTGCACGGGAAG +
Preference number: 2 (lower is better)
Translates to: SCTLACLTTFRNLGVEEMRGWEA*PFLHGK
Trigger: CTTCCCGTGCAAAAAGGGTCACGCCTCCCACCCCCG...CATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR TCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGACCCGCGGCTGGGGCCTaGGGATCCTGCCTGCCTTTG +
Preference number: 2 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRPAAGA*GSCLPL
Trigger: CAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCGGG...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCCCTGGCTCTCTTCCATaGCTACAACCTTCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSPGSLP*LQPSPP
Trigger: GGGAGGAGAAGGTTGTAGGCATGGAAGAGAGCCAGG...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCAGATCCTGCCTGCCTTTaGGGGCCACTGGTTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GCLAWLVPGMNWERTGGADPACL*GPLVAW
Trigger: CCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATC...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGACCAGCCTCCCGCGGCTaGGGCCTGAGGATCCTGCCT +
Preference number: 2 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRPASRG*GLRILP
Trigger: AGGCAGGATCCTCAGGCCCCAGCCGCGGGAGGCTGG...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCG +
Preference number: 2 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRKDLDR*RWMREA
Trigger: CGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTT...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCTCAGGCCCCCCTGTCCACCTGCTaGCCTCCCTTGGTCCTTGCA +
Preference number: 2 (lower is better)
Translates to: LWILFSVRGAWACVRAQAPLSTC*PPLVLA
Trigger: TGCAAGGACCAAGGGAGGCCAGCAGGTGGACAGGGG...GGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR GCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGACCCTGCCCCTGCTCCTaGTCCTGGAAGGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRPCPCS*SWKAWV
Trigger: GACCCAGGCCTTCCAGGAGCAGGAGCAGGGGCAGGG...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCG +
Preference number: 2 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTKDLDR*RWMREA
Trigger: CGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTT...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TCCAGCTGGGCTGCCAGGCGGATGTCATCCTGCGGCCTCAGCAGCTGTACCATGTGCTTCTGGGGACTCTaGGATCCTTGCCCGAAGTCT +
Preference number: 2 (lower is better)
Translates to: SSWAARRMSSCGLSSCTMCFWGL*DPCPKS
Trigger: AGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCA...CATGGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCTGGCAGCCCAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532600.1
3UTR-3UTR GCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAGGCGTGACCCTTTTTaGACGGGAAGCTCTGTTTTC +
Preference number: 2 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSRRDPF*TGSSVF
Trigger: GAAAACAGAGCTTCCCGTGCAAAAAGGGTCACGCCT...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCGTGCGGCAACAGACGTaGGGGTGTTTCTCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGVRQQT*GCFSKE
Trigger: CTCCTTGGAGAAACACCCTCACGTCTGTTGCCGCAC...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCAATTCCGTGCCACAGGTaGGTGTGCAGGGCTAGAGTT +
Preference number: 2 (lower is better)
Translates to: GCLAWLVPGMNWERTGGAIPCHR*VCRARV
Trigger: AACTCTAGCCCTGCACACTCACCTGTGGCACGGAAT...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGATGAGGGAAGCGATCTaGCAGCCCTTCCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRMREAI*QPFQPP
Trigger: GGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCAT...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGGCCTCCCTTGGTCCTTaGAAGCTGTGGGAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRASLGP*KLWEGL
Trigger: CAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGC...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CCA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCAAAGTCTTGAGCCCTTaGACAGGCAGACATGGGCCT +
Preference number: 2 (lower is better)
Translates to: GDSSKDLDRWRWMREAICKVLSP*TGRHGP
Trigger: AGGCCCATGTCTGCCTGTCCAAGGGCTCAAGACTTT...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCTCAGGCCTCTTTCGGGGCTGCCTaGCTCTCTTCCATGCCTACA +
Preference number: 2 (lower is better)
Translates to: LWILFSVRGAWACVRAQASFGAA*LSSMPT
Trigger: TGTAGGCATGGAAGAGAGCCAGGCAGCCCCGAAAGA...GGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGAGTGTCAGGGGAGCGTaGGCATGTGTGAGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRSVRGA*ACVRAQ
Trigger: CTGAGCCCTCACACATGCCCACGCTCCCCTGACACT...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR TCA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGGCCTGGTGCCCTGTaGTCTGGCGTGGTGTCACAG +
Preference number: 2 (lower is better)
Translates to: RATGECAGLELRMKLGCCWPGAL*SGVVSQ
Trigger: CTGTGACACCACGCCAGATCACAGGGCACCAGGCCA...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGGTTCCAGGAATGAACTaGGAGAGGACAGGAGGTGCA +
Preference number: 2 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLVPGMN*ERTGGA
Trigger: TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAAC...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCAGTTCCAGGAATGAACTaGGAGAGGACAGGAGGTGCA +
Preference number: 2 (lower is better)
Translates to: GCLAWLVPGMNWERTGGAVPGMN*ERTGGA
Trigger: TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAAC...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCGATCCTGCCTGCCTTTaGGGGCCACTGGTTGCCTGG +
Preference number: 2 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGDPACL*GPLVAW
Trigger: CCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATC...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCG +
Preference number: 2 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRKDLDR*RWMREA
Trigger: CGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTT...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp GAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCGTGCGGCAACAGACGTaGGGGTGTTTCTCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: ETRVLLPPKVPSVPLPHPVRQQT*GCFSKE
Trigger: CTCCTTGGAGAAACACCCTCACGTCTGTTGCCGCAC...GGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAGGTATGGGGCGGAGCTaGGAGGAATGTGTGCGGCAA +
Preference number: 2 (lower is better)
Translates to: FAREALFSFRATGECAGLGMGRS*EECVRQ
Trigger: TTGCCGCACACATTCCTCTCAGCTCCGCCCCATACC...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAGGCTGGTTCCAGGAATaGACTGGGAGAGGACAGGAG +
Preference number: 2 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRGWFQE*TGRGQE
Trigger: CTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCC...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGACCGGTGGAGGTGGATaGGGGAAGCGATCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKTGGGG*GKRSAS
Trigger: GCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGT...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp TATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCGCTGAGAGGAATGTGTaGGGCAACAGACGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: YGAELRGMCAATDVRVFLAERNV*GNRREG
Trigger: ACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGC...GAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCAGGGTAACCACTGACTaGCGGGACTTCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGRVTTD*RDFRAG
Trigger: GCCTGCCCTGAAGTCCCGCCAGTCAGTGGTTACCCT...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR TCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGCCAGTTAGAAAGTCTTaGGCCCTTGGACAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRPVRKS*ALGQAD
Trigger: GTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGG...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAATTCCGTGCCACAGGTaGGTGTGCAGGGCTAGAGTT +
Preference number: 2 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRIPCHR*VCRARV
Trigger: AACTCTAGCCCTGCACACTCACCTGTGGCACGGAAT...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCGGCTGGTTCCAGGAATaGACTGGGAGAGGACAGGAG +
Preference number: 2 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGGWFQE*TGRGQE
Trigger: CTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCC...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCAAACTAGGGTGCTGTTaGCCCCAAAGGTACCTTCAG +
Preference number: 2 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGKLGCC*PQRYLQ
Trigger: CTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGCCTTTGGGGGCCACTaGTTGCCTGGCCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLAFGGH*LPGLAG
Trigger: ACCAGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGC...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAGTGTCACAGGAGGTCTaGGGACAGCAGCAAAGACCT +
Preference number: 2 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRVSQEV*GQQQRP
Trigger: AGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACAC...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGACCAGTTAGAAAGTCTTaGGCCCTTGGACAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRPVRKS*ALGQAD
Trigger: GTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGG...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCAAAGGCTATGAAAAACTaGCTAGCCAGAGGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: GCLAWLVPGMNWERTGGAKAMKN*LARGQK
Trigger: TTTCTGGCCTCTGGCTAGTCAGTTTTTCATAGCCTT...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGCTGAGAGGAATGTGTaGGGCAACAGACGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: CFSKELWILFSVRGAWACAERNV*GNRREG
Trigger: ACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGC...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGCTATCTCTGGCCTGGTaGCCTGTGATCTGGCGTGGT +
Preference number: 2 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKLSLAW*PVIWRG
Trigger: ACCACGCCAGATCACAGGGCACCAGGCCAGAGATAG...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTACTGGTTGCCTGGCCTaGCTGGTTCCAGGAATGAAC +
Preference number: 2 (lower is better)
Translates to: RATGECAGLELRMKLGCCTGCLA*LVPGMN
Trigger: GTTCATTCCTGGAACCAGCCAGGCCAGGCAACCAGT...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAGTTTATACGTGGCCGTaGCCCAGGCTCTTCTTTCGG +
Preference number: 2 (lower is better)
Translates to: FAREALFSFRATGECAGLVYTWP*PRLFFR
Trigger: CCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAAC...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCGGAGGTTTATACGTaGCCGTGGCCCAGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKSEVYT*PWPRLF
Trigger: GAAGAGCCTGGGCCACGGCCACGTATAAACCTCCGA...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR TCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGCCAGTTAGAAAGTCTTaGGCCCTTGGACAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQPVRKS*ALGQAD
Trigger: GTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGG...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCTTCTCCAAGGAGTTGTaGATCCTCTTCAGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: YGAELRGMCAATDVRVFLFSKEL*ILFSVR
Trigger: CCTGACACTGAAGAGGATCCACAACTCCTTGGAGAA...GAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGACTGGTTGCCTGGCCTaGCTGGTTCCAGGAATGAAC +
Preference number: 2 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKTGCLA*LVPGMN
Trigger: GTTCATTCCTGGAACCAGCCAGGCCAGGCAACCAGT...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGCTGGACCGGTGGAGGTaGATGAGGGAAGCGATCTGC +
Preference number: 2 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLLDRWR*MREAIC
Trigger: GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAG...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGGTGTCACAGGAGGTCTaGGGACAGCAGCAAAGACCT +
Preference number: 2 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKVSQEV*GQQQRP
Trigger: AGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACAC...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR TCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGCCAGTTAGAAAGTCTTaGGCCCTTGGACAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKPVRKS*ALGQAD
Trigger: GTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGG...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACGCTGAGAGGAATGTGTaGGGCAACAGACGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYAERNV*GNRREG
Trigger: ACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGC...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAGCTGAGAGGAATGTGTaGGGCAACAGACGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: VENETRVLLPPKVPSVPLAERNV*GNRREG
Trigger: ACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGC...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTAGGCGTGACCCTTTTTaGACGGGAAGCTCTGTTTTC +
Preference number: 2 (lower is better)
Translates to: CFSKELWILFSVRGAWACRRDPF*TGSSVF
Trigger: GAAAACAGAGCTTCCCGTGCAAAAAGGGTCACGCCT...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR GCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGCTATCTCTGGCCTGGTaGCCTGTGATCTGGCGTGGT +
Preference number: 2 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLLSLAW*PVIWRG
Trigger: ACCACGCCAGATCACAGGGCACCAGGCCAGAGATAG...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGGTTCCAGGAATGAACTaGGAGAGGACAGGAGGTGCA +
Preference number: 2 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKVPGMN*ERTGGA
Trigger: TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAAC...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGCACTGTCATGCACGCTaGCCTGTCTCACCACCTTCC +
Preference number: 2 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLHCHAR*PVSPPS
Trigger: GGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGTG...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTATTCTCCAAGGAGTTGTaGATCCTCTTCAGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: FAREALFSFRATGECAGLFSKEL*ILFSVR
Trigger: CCTGACACTGAAGAGGATCCACAACTCCTTGGAGAA...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGAAAGTCTTGAGCCCTTaGACAGGCAGACATGGGCCT +
Preference number: 2 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLKVLSP*TGRHGP
Trigger: AGGCCCATGTCTGCCTGTCCAAGGGCTCAAGACTTT...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTATTCTCCAAGGAGTTGTaGATCCTCTTCAGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: VENETRVLLPPKVPSVPLFSKEL*ILFSVR
Trigger: CCTGACACTGAAGAGGATCCACAACTCCTTGGAGAA...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR CCA 72 bp GGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTaGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCAC +
Preference number: 3 (lower is better)
Translates to: GSDLPALPASRG*GLRILPAFGGH
Trigger: GTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CAA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAAAGGCCTGGGTCCGGTaGGCCACCACGGCACTGCCC +
Preference number: 3 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTKAWVR*ATTALP
Trigger: GGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTT...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR CCA 72 bp AAGGCCTGGGTCCGGTTGGCCACCACGGCACTGCCCTaGAGGGTAACCACTGACTGGCGGGACTTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: KAWVRLATTALP*RVTTDWRDFRA
Trigger: TGCCCTGAAGTCCCGCCAGTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR GCA 72 bp GTGAGGGCTCAGGCCTCGCCCTCCTCTCCACTGTCATaGACGCTGGCCTGTCTCACCACCTTCCGGAACCTG +
Preference number: 3 (lower is better)
Translates to: VRAQASPSSPLS*TLACLTTFRNL
Trigger: CAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGTGGAGAGGAGGGCGAGGCCTGAGCCCTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR CCA 72 bp CTCTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCCGTaGAGCTCCTCCTCACTCGGGGCCTTCTCTGTTGGC +
Preference number: 3 (lower is better)
Translates to: LWDPCPKSVWSP*SSSSLGAFSVG
Trigger: GCCAACAGAGAAGGCCCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532600.1
3UTR CCA 72 bp GGACCTCATGACCCCTCGGAGGTTTATACGTGGCCGTaGCCCAGGCTCTTCTTTCGGGGCTGCCTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: GPHDPSEVYTWP*PRLFFRGCLAL
Trigger: GAGAGCCAGGCAGCCCCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAACCTCCGAGGGGTCATGAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CAA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGAAACTAGGGTGCTGTaGCCCCCAAAGGTACCTTCA +
Preference number: 3 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPETRVL*PPKVPS
Trigger: TGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CAA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCAGGATCCTGCCTGCCTTaGGGGGCCACTGGTTGCCTG +
Preference number: 3 (lower is better)
Translates to: GCLAWLVPGMNWERTGGAGSCLP*GATGCL
Trigger: CAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCC...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CAA 90 bp GGGGAGCTGCTGTCAGGGAAATCCACGCCCAGGAGGACCGTCTCATCCTGGCTCGGGACTCTGGGATCCTaGCCCGAAGTCTGTCTGGTC +
Preference number: 3 (lower is better)
Translates to: GELLSGKSTPRRTVSSWLGTLGS*PEVCLV
Trigger: GACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCC...GAGCCAGGATGAGACGGTCCTCCTGGGCGTGGATTTCCCTGACAGCAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532600.1
3UTR-3UTR CAA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGGCCTCCCTTGGTCCTaGCAAGCTGTGGGAAGGGCT +
Preference number: 3 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRGLPWS*QAVGRA
Trigger: AGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCC...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CAA 90 bp GCTTCTGGGGACTCTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCCGTGGAGCTTCGGGGCCTTCTCTGTaGGCTCAGAACTGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: ASGDSGILARSLSGPRGASGPSL*AQNWPL
Trigger: CAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCGA...AGCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532600.1
3UTR TCA 72 bp GGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTaGGGGCTCAGGCCTCGCCCTCCTCTCCACTGTCAT +
Preference number: 3 (lower is better)
Translates to: GSSSVSGERGHV*GLRPRPPLHCH
Trigger: ATGACAGTGGAGAGGAGGGCGAGGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR CCA 72 bp TCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTaGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: SGDSSKDLDRWR*MREAICQPFQP
Trigger: AGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR CCA 72 bp AGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: RRSGDSSKDLDR*RWMREAICQPF
Trigger: GAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR CCA 72 bp ACTGATGGACCTCATGACCCCTCGGAGGTTTATACGTaGCCGTGGCCCAGGCTCTTCTTTCGGGGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: TDGPHDPSEVYT*PWPRLFFRGCL
Trigger: CAGGCAGCCCCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAACCTCCGAGGGGTCATGAGGTCCATCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR GCA 72 bp TATACGTGGCCGTGGCCCAGGCTCTTCTTTCGGGGCTaGCTGGCTCTCTTCCATGCCTACAACCTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: YTWPWPRLFFRG*LALFHAYNLLL
Trigger: GAGGAGAAGGTTGTAGGCATGGAAGAGAGCCAGGCAGCCCCGAAAGAAGAGCCTGGGCCACGGCCACGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR-3UTR CAA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTGGATCCTGCCTGCCTTaGGGGGCCACTGGTTGCCTG +
Preference number: 3 (lower is better)
Translates to: RATGECAGLELRMKLGCCGSCLP*GATGCL
Trigger: CAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCC...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR GCA 72 bp TGGCCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTaGAGAGGCTCTTCATGTGAAGACTCGTGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: WPPLVLASCGKG*RGSSCEDSWEE
Trigger: CTCTTCCCACGAGTCTTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR CCA 72 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTaGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGAC +
Preference number: 3 (lower is better)
Translates to: KTISGLVPCDLA*CHRRSGDSSKD
Trigger: GTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR TCA 72 bp GGACAAAAAGAAGACTATCTCTGGCCTGGTGCCCTGTaGTCTGGCGTGGTGTCACAGGAGGTCTGGGGACAG +
Preference number: 3 (lower is better)
Translates to: GQKEDYLWPGAL*SGVVSQEVWGQ
Trigger: CTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTTTTTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR CCA 72 bp AAAAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTaGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: KRRLSLAWCPVI*RGVTGGLGTAA
Trigger: TGCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CAA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCATGTTTCTCCAAGGAGTaGTGGATCCTCTTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: GCLAWLVPGMNWERTGGACFSKE*WILFSV
Trigger: GACACTGAAGAGGATCCACAACTCCTTGGAGAAACA...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CAA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGGATCCTGCCTGCCTTaGGGGGCCACTGGTTGCCTG +
Preference number: 3 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLGSCLP*GATGCL
Trigger: CAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCC...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR TCA 72 bp TGCAAGCTGTGGGAAGGGCTGCAGAGGCTCTTCATGTaGAGACTCGTGGGAAGAGAAGACCTCTGGCATGTC +
Preference number: 3 (lower is better)
Translates to: CKLWEGLQRLFM*RLVGREDLWHV
Trigger: GACATGCCAGAGGTCTTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
3UTR GCA 72 bp CCAGAAAGGACAAAAAGAAGACTATCTCTGGCCTGGTaGCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTG +
Preference number: 3 (lower is better)
Translates to: PERTKRRLSLAW*PVIWRGVTGGL
Trigger: CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTTTTTGTCCTTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CAA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTTGTTTCTCCAAGGAGTaGTGGATCCTCTTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSCFSKE*WILFSV
Trigger: GACACTGAAGAGGATCCACAACTCCTTGGAGAAACA...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR GCA 72 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTaGCCCCAAAGGTACCTTCAGTCCCTCTACCACATC +
Preference number: 3 (lower is better)
Translates to: AGLELRMKLGCC*PQRYLQSLYHI
Trigger: GATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR GCA 72 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTaGTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAC +
Preference number: 3 (lower is better)
Translates to: ECAGLELRMKLG*CCPQRYLQSLY
Trigger: GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CAA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGATGTTTCTCCAAGGAGTaGTGGATCCTCTTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRCFSKE*WILFSV
Trigger: GACACTGAAGAGGATCCACAACTCCTTGGAGAAACA...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR TCA 72 bp TGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTaGGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGG +
Preference number: 3 (lower is better)
Translates to: CTGSSVFIPCHR*VCRARVENETR
Trigger: CCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR-3UTR CAA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGTGTTTCTCCAAGGAGTaGTGGATCCTCTTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRCFSKE*WILFSV
Trigger: GACACTGAAGAGGATCCACAACTCCTTGGAGAAACA...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTCCCGCGGCTGGGGCCTaGGGATCCTGCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPPAAGA*GSCLPL
Trigger: CAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCGGG...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTCCAGCCTCCCGCGGCTaGGGCCTGAGGATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPPASRG*GLRILP
Trigger: AGGCAGGATCCTCAGGCCCCAGCCGCGGGAGGCTGG...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGCAGGAAGCCAGGGTTaGGGCGGGCGATGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPAGSQG*GGRWAG
Trigger: TCCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGC...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGAGCGTGGGCATGTGTaGGGGCTCAGGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPERGHV*GLRPRP
Trigger: AGGGCGAGGCCTGAGCCCTCACACATGCCCACGCTC...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTCCCGCGGCTGGGGCCTaGGGATCCTGCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAAPAAGA*GSCLPL
Trigger: CAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCGGG...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCCCAGGGTGCAGCTaGGGGAGCTGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPGPGCS*GSCCQG
Trigger: TCCCTGACAGCAGCTCCCCCAGCTGCACCCTGGGCC...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR TCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTAGTGGCTGGCCCAGGTaGGGGCACTGCCACCCGGTA +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLASGWPR*GHCHPV
Trigger: TACCGGGTGGCAGTGCCCTCACCTGGGCCAGCCACT...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTCCCTGCCCCTGCTCCTaGTCCTGGAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLAPCPCS*SWKAWV
Trigger: GACCCAGGCCTTCCAGGAGCAGGAGCAGGGGCAGGG...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTCCCCGCGGACAGTCCTaGACCCGCAGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAAPRGQS*TRRTRK
Trigger: CTTCCTGGTCCTGCGGGTCCAGGACTGTCCGCGGGG...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
CDS-3UTR CCA 90 bp GCCTCCAGCTGGGCTGCCAGGCGGATGTCATCCTGCGGCCTCAGCAGCTGTACCCGGGGTGCCTCCAGCTaGGCTGCCAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: ASSWAARRMSSCGLSSCTRGASS*AARRMS
Trigger: TGACATCCGCCTGGCAGCCCAGCTGGAGGCACCCCG...GGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCTGGCAGCCCAGCTGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTTGCTCCTGGAAGGCCTaGGTCCGGTTGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPCSWKA*VRLATT
Trigger: CGTGGTGGCCAACCGGACCCAGGCCTTCCAGGAGCA...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCGCAGGAAGCCAGGGTTaGGGCGGGCGATGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASAGSQG*GGRWAG
Trigger: TCCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGC...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCGCAGGAAGCCAGGGTTaGGGCGGGCGATGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSAGSQG*GGRWAG
Trigger: TCCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGC...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCCCTGCCCCTGCTCCTaGTCCTGGAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASPCPCS*SWKAWV
Trigger: GACCCAGGCCTTCCAGGAGCAGGAGCAGGGGCAGGG...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTGGCTCGGTCCCGCTGTaGCACCAGCAGCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLAGSVPL*HQQQHL
Trigger: CAGATGCTGCTGCTGGTGGCACAGCGGGACCGAGCC...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTAGAGGTGGGGGAAGATaGGGGAGGCTCGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAARGGGR*GRLGPA
Trigger: AGCGGGACCGAGCCTCCCGCATCTTCCCCCACCTCT...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGCGCCAGGCTCGGCGCTaGGAGGCCGCAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRRQARR*EAAETP
Trigger: TGGAGTCTCTGCGGCCTCCCAGCGCCGAGCCTGGCG...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCGCGAACGGCTCACTGTaGCCAGGGCCATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSANGSL*PGPWSQ
Trigger: CTGGCTCCATGGCCCTGGTCACAGTGAGCCGTTCGC...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
CDS-3UTR TCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGGAGCGTGGGCATGTGTaGGGGCTCAGGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRERGHV*GLRPRP
Trigger: AGGGCGAGGCCTGAGCCCTCACACATGCCCACGCTC...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGACTCTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCCGTGGAGCTCCTCCAGCACCGCAAAGCTCTaGCCAGGGCCCCACGGGCGT +
Preference number: 4 (lower is better)
Translates to: WGLWDPCPKSVWSPWSSSSTAKL*PGPHGR
Trigger: ACGCCCGTGGGGCCCTGGGCAGAGCTTTGCGGTGCT...GGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp GGGGAGCTGCTGTCAGGGAAATCCACGCCCAGGAGGACCGTCTCATCCTGGCTCCCCCGCGGACAGTCCTaGACCCGCAGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GELLSGKSTPRRTVSSWLPRGQS*TRRTRK
Trigger: CTTCCTGGTCCTGCGGGTCCAGGACTGTCCGCGGGG...GAGCCAGGATGAGACGGTCCTCCTGGGCGTGGATTTCCCTGACAGCAGCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp GTCCCCGTGGAGCTCCTCCTCACTCGGGGCCTTCTCTGTTGGCTCAGAACTGGCGGCCCAGGGTGCAGCTaGGGGAGCTGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VPVELLLTRGLLCWLRTGGPGCS*GSCCQG
Trigger: TCCCTGACAGCAGCTCCCCCAGCTGCACCCTGGGCC...GCCAGTTCTGAGCCAACAGAGAAGGCCCCGAGTGAGGAGGAGCTCCACGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCGCCAGGCTCGGCGCTaGGAGGCCGCAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GDSSKDLDRWRWMREAICRQARR*EAAETP
Trigger: TGGAGTCTCTGCGGCCTCCCAGCGCCGAGCCTGGCG...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTCCCCTGTCCACCTGCTaGCCTCCCTTGGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLAPLSTC*PPLVLA
Trigger: TGCAAGGACCAAGGGAGGCCAGCAGGTGGACAGGGG...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAGTCACGGTACTGCTaGAGGGGGAGCCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSKSRYC*RGSPRR
Trigger: GCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTT...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCAGGGCTCGGTTGGGGCGGGCGATaGGCCGGAGCTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: AGLSHHLPEPGRRGNAGLGWGGR*AGAPAR
Trigger: ACGTGCAGGAGCTCCGGCCCATCGCCCGCCCCAACC...GAGCCCTGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCTGCTGCGTTCCACTCTaGGCCCAGGTAGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASCCVPL*AQVEVG
Trigger: CCCCACCTCTACCTGGGCTCAGAGTGGAACGCAGCA...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGCAGCACTGTGGCCGCTaGGCGGCTGACGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRQHCGR*AADAHL
Trigger: AAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTG...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTAGGCGGATGTCATCCTaGGGCCTCAGCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLARRMSS*GLSSCT
Trigger: GGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCT...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGGGCCCCCTGTCCACCTaGTGGCCTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRGPLST*WPPLVL
Trigger: AAGGACCAAGGGAGGCCAGCAGGTGGACAGGGGGCC...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCACGTGGCGCAGGGCCTaGTCCAGGCTGCATTCGTAC +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSTWRRA*SRLHSY
Trigger: GTACGAATGCAGCCTGGAGCAGGCCCTGCGCCACGT...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGCTTCGCTGGACCGCCTaGTCCCAGGGCCCCACGGGC +
Preference number: 4 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGLRWTA*SQGPTG
Trigger: GCCCGTGGGGCCCTGGGACCAGGCGGTCCAGCGAAG...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR CCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACACGGGGTGCCTCCAGCTaGGCTGCCAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTRGASS*AARRMS
Trigger: TGACATCCGCCTGGCAGCCCAGCTGGAGGCACCCCG...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCGGCCCAGGGTGCAGCTaGGGGAGCTGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GDSSKDLDRWRWMREAICGPGCS*GSCCQG
Trigger: TCCCTGACAGCAGCTCCCCCAGCTGCACCCTGGGCC...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR CCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGGCCCAGGGTGCAGCTaGGGGAGCTGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRGPGCS*GSCCQG
Trigger: TCCCTGACAGCAGCTCCCCCAGCTGCACCCTGGGCC...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR CCA 90 bp TCCACCTGCTGGCCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCGCCTTTGGGGGCCACTaGTTGCCTGGCCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: STCWPPLVLASCGKGCRGAFGGH*LPGLAG
Trigger: ACCAGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGC...GCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCAGGTTGGGGCGGGCGATaGGCCGGAGCTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: GCLAWLVPGMNWERTGGAGWGGR*AGAPAR
Trigger: ACGTGCAGGAGCTCCGGCCCATCGCCCGCCCCAACC...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TCTGGGGACTCTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCCGTGGAGCTCCTGCGAACGGCTCACTGTaGCCAGGGCCATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGDSGILARSLSGPRGAPANGSL*PGPWSQ
Trigger: CTGGCTCCATGGCCCTGGTCACAGTGAGCCGTTCGC...AGGAGCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR TCA 90 bp CTCTCCAGCTCCAAGGAGGGCTCCAGAAGACTGATGGACCTCATGACCCCTCGGGAGCGTGGGCATGTGTaGGGGCTCAGGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LSSSKEGSRRLMDLMTPRERGHV*GLRPRP
Trigger: AGGGCGAGGCCTGAGCCCTCACACATGCCCACGCTC...CCGAGGGGTCATGAGGTCCATCAGTCTTCTGGAGCCCTCCTTGGAGCTGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp AAGGCCTGGGTCCGGTTGGCCACCACGGCACTGCCCTGGAGGGTAACCACTGACGGTATGGGGCGGAGCTaGGAGGAATGTGTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: KAWVRLATTALPWRVTTDGMGRS*EECVRQ
Trigger: TTGCCGCACACATTCCTCTCAGCTCCGCCCCATACC...GTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCACCCGCGGCTGGGGCCTaGGGATCCTGCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPPAAGA*GSCLPL
Trigger: CAAAGGCAGGCAGGATCCTCAGGCCCCAGCCGCGGG...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CCACCTGCTGGCCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCTTGCTGCGTTCCACTCTaGGCCCAGGTAGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPAGLPWSLQAVGRAAEACCVPL*AQVEVG
Trigger: CCCCACCTCTACCTGGGCTCAGAGTGGAACGCAGCA...AGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCACCATGAGGTGCAGGTaGTGCCTCTGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASTMRCR*CLCSSC
Trigger: GCAGGAGGAGCAGAGGCAGCACCTGCACCTCATGGT...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGGCCCCCTGTCCACCTaGTGGCCTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTGPLST*WPPLVL
Trigger: AAGGACCAAGGGAGGCCAGCAGGTGGACAGGGGGCC...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTCTATCTCTGGCCTGGTaGCCTGTGATCTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLALSLAW*PVIWRG
Trigger: ACCACGCCAGATCACAGGGCACCAGGCCAGAGATAG...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGTGACCCTGTTCCTCTaGAGCTCCTCCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPVTLFL*SSSRFA
Trigger: AGCAAACCTGGAGGAGCTGCAGAGGAACAGGGTCAC...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCGCCTCAATGAAGCGGTaGGTCTCCTTCCAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASASMKR*VSFQCG
Trigger: GCCGCACTGGAAGGAGACGCACCGCTTCATTGAGGC...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCACCCCGCGGACAGTCCTaGACCCGCAGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GCLAWLVPGMNWERTGGAPRGQS*TRRTRK
Trigger: CTTCCTGGTCCTGCGGGTCCAGGACTGTCCGCGGGG...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
CDS-3UTR CCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTAAGCTCTGCCTTCGCTaGAGTCGACTCCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAAKLCLR*SRLLRW
Trigger: CCAGCGAAGGAGTCGACTCCAGCGAAGGCAGAGCTT...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR CCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTCTGTCTGGTCCCCGTaGAGCTCCTCCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRSVWSP*SSSSLG
Trigger: CCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGA...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAGGGTAACCACTGACTaGCGGGACTTCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSRVTTD*RDFRAG
Trigger: GCCTGCCCTGAAGTCCCGCCAGTCAGTGGTTACCCT...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAGTGTCAGGGGAGCGTaGGCATGTGTGAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSSVRGA*ACVRAQ
Trigger: CTGAGCCCTCACACATGCCCACGCTCCCCTGACACT...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCAGTGTCAGGGGAGCGTaGGCATGTGTGAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASSVRGA*ACVRAQ
Trigger: CTGAGCCCTCACACATGCCCACGCTCCCCTGACACT...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCCTGGACCGGTGGAGGTaGATGAGGGAAGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSLDRWR*MREAIC
Trigger: GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAG...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGCAGTGCGGCAGCAGCTaGGCCGACTCCTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRQCGSS*ADSSSQ
Trigger: CTGGGATGAGGAGTCGGCCCAGCTGCTGCCGCACTG...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCACCACCCTCAGGTTCTaGCCGTCAGGATGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSTTLRF*PSGCPG
Trigger: ACCAGGGCATCCTGACGGCCAGAACCTGAGGGTGGT...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGAGTGGCTGGCCCAGGTaGGGGCACTGCCACCCGGTA +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLSGWPR*GHCHPV
Trigger: TACCGGGTGGCAGTGCCCTCACCTGGGCCAGCCACT...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TCATGCACGCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGAGTGGCTGGCCCAGGTaGGGGCACTGCCACCCGGTA +
Preference number: 4 (lower is better)
Translates to: SCTLACLTTFRNLGVEEMSGWPR*GHCHPV
Trigger: TACCGGGTGGCAGTGCCCTCACCTGGGCCAGCCACT...CATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACACTGGAGGGTAACCACTaGCTGGCGGGACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTLEGNH*LAGLQG
Trigger: GCCCTGAAGTCCCGCCAGTCAGTGGTTACCCTCCAG...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp ACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGCGGGGGTGGGAGGCGTaGCCCTTTTTGCACGGGAAG +
Preference number: 4 (lower is better)
Translates to: TISGLVPCDLAWCHRRSGRGWEA*PFLHGK
Trigger: CTTCCCGTGCAAAAAGGGTCACGCCTCCCACCCCCG...CCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCCTCTTGCAGCCTCAATaGAGCGGTGCGTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSLLQPQ*SGASPS
Trigger: GGAAGGAGACGCACCGCTTCATTGAGGCTGCAAGAG...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCTCTTGCAGCCTCAATaGAGCGGTGCGTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASLLQPQ*SGASPS
Trigger: GGAAGGAGACGCACCGCTTCATTGAGGCTGCAAGAG...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTGGCCGCTGAGCGGCTaGCGCCCATCTTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVWPLSG*RPSCSG
Trigger: TCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCA...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp ACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGCAGCACTGTGGCCGCTaGGCGGCTGACGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: TISGLVPCDLAWCHRRSGQHCGR*AADAHL
Trigger: AAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTG...CCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTCTCAGAACTGGCCTCTaGTGCATCATCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPLRTGL*CIIIVP
Trigger: GGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAG...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GGGGAGCTGCTGTCAGGGAAATCCACGCCCAGGAGGACCGTCTCATCCTGGCTCACCATGAGGTGCAGGTaGTGCCTCTGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GELLSGKSTPRRTVSSWLTMRCR*CLCSSC
Trigger: GCAGGAGGAGCAGAGGCAGCACCTGCACCTCATGGT...GAGCCAGGATGAGACGGTCCTCCTGGGCGTGGATTTCCCTGACAGCAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR GCA 90 bp CCACCTGCTGGCCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCTACCATGAGGTGCAGGTaGTGCCTCTGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPAGLPWSLQAVGRAAEATMRCR*CLCSSC
Trigger: GCAGGAGGAGCAGAGGCAGCACCTGCACCTCATGGT...AGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp CTGTCTGGTCCCCGTGGAGCTCCTCCTCACTCGGGGCCTTCTCTGTTGGCTCAGAGGCGGATGTCATCCTaGGGCCTCAGCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LSGPRGAPPHSGPSLLAQRRMSS*GLSSCT
Trigger: GGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCT...CTGAGCCAACAGAGAAGGCCCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR GCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGGCCTCCCTTGGTCCTTaGAAGCTGTGGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRASLGP*KLWEGL
Trigger: CAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGC...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TCCACCTGCTGGCCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCGCCTCCCTTGGTCCTTaGAAGCTGTGGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: STCWPPLVLASCGKGCRGASLGP*KLWEGL
Trigger: CAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGC...GCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGGGCCCCCTGTCCACCTaGTGGCCTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLGPLST*WPPLVL
Trigger: AAGGACCAAGGGAGGCCAGCAGGTGGACAGGGGGCC...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CAGAAGACTGATGGACCTCATGACCCCTCGGAGGTTTATACGTGGCCGTGGCCCCCCTGCCCCTGCTCCTaGTCCTGGAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QKTDGPHDPSEVYTWPWPPCPCS*SWKAWV
Trigger: GACCCAGGCCTTCCAGGAGCAGGAGCAGGGGCAGGG...GGGCCACGGCCACGTATAAACCTCCGAGGGGTCATGAGGTCCATCAGTCTTCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTGCTGAGAGGAATGTGTaGGGCAACAGACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAAAERNV*GNRREG
Trigger: ACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGC...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCTCAGGCCGGCTCGGTCCCGCTGTaGCACCAGCAGCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LWILFSVRGAWACVRAQAGSVPL*HQQQHL
Trigger: CAGATGCTGCTGCTGGTGGCACAGCGGGACCGAGCC...GGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGGACCAGCACGTGGGTaGCCTGTGCTCTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRGPARG*PVLLQP
Trigger: AGGCTGCAAGAGCACAGGGCACCCACGTGCTGGTCC...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGGACCAGCACGTGGGTaGCCTGTGCTCTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTGPARG*PVLLQP
Trigger: AGGCTGCAAGAGCACAGGGCACCCACGTGCTGGTCC...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTCCTGGCTCTCTTCCATaGCTACAACCTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLAPGSLP*LQPSPP
Trigger: GGGAGGAGAAGGTTGTAGGCATGGAAGAGAGCCAGG...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCTCCTCCTGCTTCTGGGGACTCTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCTCTGTCTGGTCCCCGTaGAGCTCCTCCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: APPASGDSGILARSLSGPSVWSP*SSSSLG
Trigger: CCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGA...GGGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCAGGAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp GCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCAGGGCTCTCTGTCTGGTCCCCGTaGAGCTCCTCCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: AGLSHHLPEPGRRGNAGLSVWSP*SSSSLG
Trigger: CCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGA...GAGCCCTGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp CCGAAGTCTGTCTGGTCCCCGTGGAGCTCCTCCTCACTCGGGGCCTTCTCTGTTTGCCCGAAGTCTGTCTaGTCCCCGTGGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PKSVWSPWSSSSLGAFSVCPKSV*SPWSSS
Trigger: GGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCA...AACAGAGAAGGCCCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGACTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTTGCTTCTGGGGACTCTaGGATCCTTGCCCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLACFWGL*DPCPKS
Trigger: AGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCA...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGCGGGGTGCCTCCAGCTaGGCTGCCAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGRGASS*AARRMS
Trigger: TGACATCCGCCTGGCAGCCCAGCTGGAGGCACCCCG...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTGTGGCCCACATGGTCTaGATGGAGATGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLAVAHMV*MEMGLK
Trigger: CTTCAAGCCCATCTCCATCCAGACCATGTGGGCCAC...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTCGCCAGGCTCGGCGCTaGGAGGCCGCAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSRQARR*EAAETP
Trigger: TGGAGTCTCTGCGGCCTCCCAGCGCCGAGCCTGGCG...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCACCTGCTGGCCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCTGGTCCTTGCAAGCTGTaGGAAGGGCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PPAGLPWSLQAVGRAAEAGPCKL*EGLQRL
Trigger: GAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACC...AGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp TCCACCTGCTGGCCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCAGGGTAACCACTGACTaGCGGGACTTCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: STCWPPLVLASCGKGCRGRVTTD*RDFRAG
Trigger: GCCTGCCCTGAAGTCCCGCCAGTCAGTGGTTACCCT...GCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCAGGCCTGGGTCCGGTTaGCCACCACGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGRPGSG*PPRHCP
Trigger: AGGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCCACTGTCATGCACGCTaGCCTGTCTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSHCHAR*PVSPPS
Trigger: GGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGTG...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTAGACTATCTCTGGCCTaGTGCCCTGTGATCTGGCGT +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAARLSLA*CPVIWR
Trigger: ACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGCAGTGCGGCAGCAGCTaGGCCGACTCCTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: TISGLVPCDLAWCHRRSGQCGSS*ADSSSQ
Trigger: CTGGGATGAGGAGTCGGCCCAGCTGCTGCCGCACTG...CCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCACATGGCTCTGGCGGCTaGCCGTCAGGATGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GCLAWLVPGMNWERTGGAHGSGG*PSGCPG
Trigger: ACCAGGGCATCCTGACGGCCAGCCGCCAGAGCCATG...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR CCA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCTCCCAGACATGGCTCTaGCGGCTGGCCGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: GDSSKDLDRWRWMREAICSQTWL*RLAVRM
Trigger: CATCCTGACGGCCAGCCGCCAGAGCCATGTCTGGGA...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR CCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCACCACCCTCAGGTTCTaGCGGAAGAGGTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASTTLRF*RKRWEW
Trigger: CCATTCCCACCTCTTCCGCCAGAACCTGAGGGTGGT...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR TCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGAGTGGCTGGCCCAGGTaGGGGCACTGCCACCCGGTA +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRSGWPR*GHCHPV
Trigger: TACCGGGTGGCAGTGCCCTCACCTGGGCCAGCCACT...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCTGGAGGGTAACCACTaGCTGGCGGGACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLLEGNH*LAGLQG
Trigger: GCCCTGAAGTCCCGCCAGTCAGTGGTTACCCTCCAG...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTCTGGAGGGTAACCACTaGCTGGCGGGACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVLEGNH*LAGLQG
Trigger: GCCCTGAAGTCCCGCCAGTCAGTGGTTACCCTCCAG...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTCCAGTTAGAAAGTCTTaGGCCCTTGGACAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAAPVRKS*ALGQAD
Trigger: GTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGG...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCACGGGGGTGGGAGGCGTaGCCCTTTTTGCACGGGAAG +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPRGWEA*PFLHGK
Trigger: CTTCCCGTGCAAAAAGGGTCACGCCTCCCACCCCCG...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGGGCTGGTTCCAGGAATaGACTGGGAGAGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRGWFQE*TGRGQE
Trigger: CTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCC...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGTGGCCGCTGAGCGGCTaGCGCCCATCTTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLWPLSG*RPSCSG
Trigger: TCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCA...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp ATGCACGCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCATGGCCGCTGAGCGGCTaGCGCCCATCTTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: MHAGLSHHLPEPGRRGNAWPLSG*RPSCSG
Trigger: TCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCA...TGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACACCGGTACAAGGCCGCTaGCTAGAGCTGCCTCACATG +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTPVQGR*LELPHM
Trigger: CATGTGAGGCAGCTCTAGGCAGCGGCCTTGTACCGG...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCGCTGAGAGGAATGTGTaGGGCAACAGACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSAERNV*GNRREG
Trigger: ACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGC...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAATGAAGTCACGGTACTaGTGGAGGGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTMKSRY*WRGSPR
Trigger: CCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCAT...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCAAGAGGTGGGGGAAGATaGGGGAGGCTCGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPRGGGR*GRLGPA
Trigger: AGCGGGACCGAGCCTCCCGCATCTTCCCCCACCTCT...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCAACGTGGCGCAGGGCCTaGTCCAGGCTGCATTCGTAC +
Preference number: 4 (lower is better)
Translates to: GCLAWLVPGMNWERTGGATWRRA*SRLHSY
Trigger: GTACGAATGCAGCCTGGAGCAGGCCCTGCGCCACGT...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCAGTCGACTCCTTCGCTaGACCGCCTGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGSRLLR*TAWSQG
Trigger: GCCCTGGGACCAGGCGGTCCAGCGAAGGAGTCGACT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR CCA 90 bp GCCTCCAGCTGGGCTGCCAGGCGGATGTCATCCTGCGGCCTCAGCAGCTGTACCAGGACCGTCTCATCCTaGCTCAGACCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ASSWAARRMSSCGLSSCTRTVSS*LRPSPS
Trigger: AGAAGGAGAAGGTCTGAGCCAGGATGAGACGGTCCT...GGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCTGGCAGCCCAGCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCGCTTGGTGCAATACCTaGAGTGTGGCCCACATGGTC +
Preference number: 4 (lower is better)
Translates to: PGPVEVDEGSDLPALPASAWCNT*SVAHMV
Trigger: GACCATGTGGGCCACACTCCAGGTATTGCACCAAGC...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTGCTGCCTCACATGCTTaGTGCAATACCTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAAAASHA*CNTWSV
Trigger: CACACTCCAGGTATTGCACCAAGCATGTGAGGCAGC...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCCGCCAGGCTCGGCGCTaGGAGGCCGCAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: ETRVLLPPKVPSVPLPHPRQARR*EAAETP
Trigger: TGGAGTCTCTGCGGCCTCCCAGCGCCGAGCCTGGCG...GGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCATGCTCCTGGAAGGCCTaGGTCCGGTTGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPCSWKA*VRLATT
Trigger: CGTGGTGGCCAACCGGACCCAGGCCTTCCAGGAGCA...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGTGCTCCTGGAAGGCCTaGGTCCGGTTGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGCSWKA*VRLATT
Trigger: CGTGGTGGCCAACCGGACCCAGGCCTTCCAGGAGCA...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCAGTGTCAGGGGAGCGTaGGCATGTGTGAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GDSSKDLDRWRWMREAICSVRGA*ACVRAQ
Trigger: CTGAGCCCTCACACATGCCCACGCTCCCCTGACACT...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTAAAGTCTTGAGCCCTTaGACAGGCAGACATGGGCCT +
Preference number: 4 (lower is better)
Translates to: WGLRILPAFGGHWLPGLAKVLSP*TGRHGP
Trigger: AGGCCCATGTCTGCCTGTCCAAGGGCTCAAGACTTT...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGTTGGCCACCACGGCACTGCCCTGGAGGGTAACCACTGACTGGCGGGACTTCACTGGTTGCCTGGCCTaGCTGGTTCCAGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: RLATTALPWRVTTDWRDFTGCLA*LVPGMN
Trigger: GTTCATTCCTGGAACCAGCCAGGCCAGGCAACCAGT...GAAGTCCCGCCAGTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGTGGCCAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCGCCTTTGGGGGCCACTaGTTGCCTGGCCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGAFGGH*LPGLAG
Trigger: ACCAGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGC...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGCCTTTGGGGGCCACTaGTTGCCTGGCCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLAFGGH*LPGLAG
Trigger: ACCAGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGC...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCTGGACCGGTGGAGGTaGATGAGGGAAGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: GDSSKDLDRWRWMREAICLDRWR*MREAIC
Trigger: GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAG...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGTTGGCCACCACGGCACTGCCCTGGAGGGTAACCACTGACTGGCGGGACTTCAGACTATCTCTGGCCTaGTGCCCTGTGATCTGGCGT +
Preference number: 4 (lower is better)
Translates to: RLATTALPWRVTTDWRDFRLSLA*CPVIWR
Trigger: ACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT...GAAGTCCCGCCAGTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGTGGCCAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGCGCAGCTCCAGAGCCTaGCGGATCTCTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRRSSRA*RISLEV
Trigger: CACTTCCAAAGAGATCCGCCAGGCTCTGGAGCTGCG...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCAAGTCACGGTACTGCTaGAGGGGGAGCCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGKSRYC*RGSPRR
Trigger: GCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACACAGTGGACCAGCACGTaGGTGCCCTGTGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTQWTST*VPCALA
Trigger: TGCAAGAGCACAGGGCACCCACGTGCTGGTCCACTG...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAAGAGACTTCAGGGGCTaGGTGCTCCTCTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTRDFRG*VLLWGD
Trigger: GTCTCCCCAGAGGAGCACCCAGCCCCTGAAGTCTCT...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR TCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGGATGGAGATGGGCTTaGAGATCCGGCTTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTGWRWA*RSGFAH
Trigger: GTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCC...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCCATGTCACTGGTCTCTaGGGTGCTCTCCAGATCCAA +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSHVTGL*GALQIQ
Trigger: TTGGATCTGGAGAGCACCTCAGAGACCAGTGACATG...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308298.11
CDS-3UTR TCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGACCGGTGGAGGTGGATaGGGGAAGCGATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLTGGGG*GKRSAS
Trigger: GCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGT...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCACCGGTGGAGGTGGATaGGGGAAGCGATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGTGGGG*GKRSAS
Trigger: GCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCTGTTCAAGATGTGGGTaGCCCTGTTCCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSCSRCG*PCSSAA
Trigger: AGCTGCAGAGGAACAGGGTCACCCACATCTTGAACA...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACACTCTTGCAGCCTCAATaGAGCGGTGCGTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTLLQPQ*SGASPS
Trigger: GGAAGGAGACGCACCGCTTCATTGAGGCTGCAAGAG...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGGACTCTGGGATCCTTaGCCGAAGTCTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTGLWDP*PKSVWS
Trigger: GGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCC...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGGACTCTGGGATCCTTaGCCGAAGTCTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRGLWDP*PKSVWS
Trigger: GGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCC...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGCTTCTGGGGACTCTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCCGTGGAGCGGACTCTGGGATCCTTaGCCGAAGTCTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CFWGLWDPCPKSVWSPWSGLWDP*PKSVWS
Trigger: GGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCC...GCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR GCA 90 bp TTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCTCAGGCCTGCAGCTGGGGGAGCTaGTGTCAGGGAAATCCACGC +
Preference number: 4 (lower is better)
Translates to: LWILFSVRGAWACVRAQACSWGS*CQGNPR
Trigger: GCGTGGATTTCCCTGACAGCAGCTCCCCCAGCTGCA...GGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp ACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGATGAGGGAAGCGATCTaGCAGCCCTTCCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TISGLVPCDLAWCHRRSGMREAI*QPFQPP
Trigger: GGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCAT...CCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAGGGTGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGGGCTCGGTCCCGCTGTaGCACCAGCAGCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: EGVSPRSCGSSSVSGERGGSVPL*HQQQHL
Trigger: CAGATGCTGCTGCTGGTGGCACAGCGGGACCGAGCC...CCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGAGAGGTGGGGGAAGATaGGGGAGGCTCGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRRGGGR*GRLGPA
Trigger: AGCGGGACCGAGCCTCCCGCATCTTCCCCCACCTCT...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGGCCTCAATGAAGCGGTaGGTCTCCTTCCAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLASMKR*VSFQCG
Trigger: GCCGCACTGGAAGGAGACGCACCGCTTCATTGAGGC...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTCTGTTGGCTCAGAACTaGCCTCTGCTGCATCATCAT +
Preference number: 4 (lower is better)
Translates to: RWRWMREAICQPFQPPAALLAQN*PLLHHH
Trigger: ATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAG...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGTGCCCGAAGTCTGTCTaGTCCCCGTGGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLCPKSV*SPWSSS
Trigger: GGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCA...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TCCTTCTCGTGTAGAAACTACCAGCAGGTAGCGGAGCCGGGGAGGCCGGGGTGCTGCTTCTGGGGACTCTaGGATCCTTGCCCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SFSCRNYQQVAEPGRPGCCFWGL*DPCPKS
Trigger: AGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCA...GCACCCCGGCCTCCCCGGCTCCGCTACCTGCTGGTAGTTTCTACACGAGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp TGCTTCTGGGGACTCTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCCGTGGAGCTGCTCCTCCTGCTTCTaGGGACTCTGGGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: CFWGLWDPCPKSVWSPWSCSSCF*GLWDPC
Trigger: GCAAGGATCCCAGAGTCCCCAGAAGCAGGAGGAGCA...GCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAGGACCGTCTCATCCTaGCTCAGACCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSRTVSS*LRPSPS
Trigger: AGAAGGAGAAGGTCTGAGCCAGGATGAGACGGTCCT...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCTGCTGGCCTCCCTTaGTCCTTGCAAGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLPAGLP*SLQAVG
Trigger: TCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGG...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCTCAGGCCCCTGCTGGCCTCCCTTaGTCCTTGCAAGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LWILFSVRGAWACVRAQAPAGLP*SLQAVG
Trigger: TCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGG...GGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGACCACGGCACTGCCCTaGAGGGTAACCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLTTALP*RVTTDW
Trigger: CCAGTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGT...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGCCTTTGGGGGCCACTaGTTGCCTGGCCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSAFGGH*LPGLAG
Trigger: ACCAGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGC...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTCAGTGGACCAGCACGTaGGTGCCCTGTGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVQWTST*VPCALA
Trigger: TGCAAGAGCACAGGGCACCCACGTGCTGGTCCACTG...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGACGCCCATCTTGCAGTaGACCAGCACGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLTPILQ*TSTWVP
Trigger: GGGCACCCACGTGCTGGTCCACTGCAAGATGGGCGT...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGGGTTGGGGCGGGCGATaGGCCGGAGCTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWGWGGR*AGAPAR
Trigger: ACGTGCAGGAGCTCCGGCCCATCGCCCGCCCCAACC...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGAGAGACTTCAGGGGCTaGGTGCTCCTCTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: TISGLVPCDLAWCHRRSGRDFRG*VLLWGD
Trigger: GTCTCCCCAGAGGAGCACCCAGCCCCTGAAGTCTCT...CCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR TCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGATTCCGTGCCACAGGTaGGTGTGCAGGGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRIPCHR*VCRARV
Trigger: AACTCTAGCCCTGCACACTCACCTGTGGCACGGAAT...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAATTCCGTGCCACAGGTaGGTGTGCAGGGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTIPCHR*VCRARV
Trigger: AACTCTAGCCCTGCACACTCACCTGTGGCACGGAAT...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GGTGCTCTCCAGCTCCAAGGAGGGCTCCAGAAGACTGATGGACCTCATGACCCCGGCTGGTTCCAGGAATaGACTGGGAGAGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: GALQLQGGLQKTDGPHDPGWFQE*TGRGQE
Trigger: CTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCC...GGGGTCATGAGGTCCATCAGTCTTCTGGAGCCCTCCTTGGAGCTGGAGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTTGGCCTGGTGCCCTGTaGTCTGGCGTGGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSWPGAL*SGVVSQ
Trigger: CTGTGACACCACGCCAGATCACAGGGCACCAGGCCA...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCCACTCTCCAGGTCACTaGCATCCAACACTTTCCACA +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSHSPGH*HPTLST
Trigger: TGTGGAAAGTGTTGGATGTCAGTGACCTGGAGAGTG...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GCAGCTGGGGGAGCTGCTGTCAGGGAAATCCACGCCCAGGAGGACCGTCTCATCAGAACTGGCCTCTGCTaGATCATCATTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AAGGAAVREIHAQEDRLIRTGLC*IIIVPS
Trigger: GGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCT...GATGAGACGGTCCTCCTGGGCGTGGATTTCCCTGACAGCAGCTCCCCCAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR GCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTGGACTCTGGGATCCTTaGCCGAAGTCTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVGLWDP*PKSVWS
Trigger: GGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCC...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCAGGGCTCTGGACTCTGGGATCCTTaGCCGAAGTCTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LACLTTFRNLGVEEMQGSGLWDP*PKSVWS
Trigger: GGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCC...AGAGCCCTGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCAAGGCGGATGTCATCCTaGGGCCTCAGCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPRRMSS*GLSSCT
Trigger: GGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCT...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGAGGCGGATGTCATCCTaGGGCCTCAGCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGRRMSS*GLSSCT
Trigger: GGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCT...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCTTGAAGATCCGGCTTTaGCCACCAGACGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: GDSSKDLDRWRWMREAICLKIRL*PPDVTL
Trigger: CAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAA...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAGGTTTATACGTGGCCGTGGCCCAGGCTCTTCTTTCGGGGCTGCCTGGCTCTCTTGAAGATCCGGCTTTaGCCACCAGACGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: EVYTWPWPRLFFRGCLALLKIRL*PPDVTL
Trigger: CAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAA...GAGAGCCAGGCAGCCCCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGCCGGTACAAGGCCGCTaGCTAGAGCTGCCTCACATG +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLPVQGR*LELPHM
Trigger: CATGTGAGGCAGCTCTAGGCAGCGGCCTTGTACCGG...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACATCAGCACGGATCGCCTaGTCCATCTGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTSARIA*SICSCS
Trigger: AGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGA...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGGCCTCCCTTGGTCCTTaGAAGCTGTGGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGASLGP*KLWEGL
Trigger: CAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGC...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGCCTCCCTTGGTCCTTaGAAGCTGTGGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLASLGP*KLWEGL
Trigger: CAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGC...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTACGTGGCGCAGGGCCTaGTCCAGGCTGCATTCGTAC +
Preference number: 4 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSTWRRA*SRLHSY
Trigger: GTACGAATGCAGCCTGGAGCAGGCCCTGCGCCACGT...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCGGCTGGCCGTCAGGATaGCCTGGTAGATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGGWPSG*PGRSAA
Trigger: AGCTGCAGATCTACCAGGGCATCCTGACGGCCAGCC...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR GCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGACCCCACCCACTTTCTaGTCCCAGACATGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLTPPTF*SQTWLW
Trigger: CCAGAGCCATGTCTGGGAGCAGAAAGTGGGTGGGGT...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR CCA 90 bp CTCTCCAGCTCCAAGGAGGGCTCCAGAAGACTGATGGACCTCATGACCCCTCGGAAGCTCTGCCTTCGCTaGAGTCGACTCCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSSKEGSRRLMDLMTPRKLCLR*SRLLRW
Trigger: CCAGCGAAGGAGTCGACTCCAGCGAAGGCAGAGCTT...CCGAGGGGTCATGAGGTCCATCAGTCTTCTGGAGCCCTCCTTGGAGCTGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCCTGTTGGCTCAGAACTaGCCTCTGCTGCATCATCAT +
Preference number: 4 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSLLAQN*PLLHHH
Trigger: ATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAG...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGTCTGGTCCCCGTaGAGCTCCTCCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRSVWSP*SSSSLG
Trigger: CCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGA...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTTCTGTCTGGTCCCCGTaGAGCTCCTCCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGSVWSP*SSSSLG
Trigger: CCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGA...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCTCTTCATGTGAATGCCCGAAGTCTGTCTaGTCCCCGTGGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPLVLASCGKGCRGSSCECPKSV*SPWSSS
Trigger: GGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCA...TTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGTGCTTCTGGGGACTCTaGGATCCTTGCCCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRCFWGL*DPCPKS
Trigger: AGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCA...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGTGCTCCTCCTGCTTCTaGGGACTCTGGGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLCSSCF*GLWDPC
Trigger: GCAAGGATCCCAGAGTCCCCAGAAGCAGGAGGAGCA...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGCGGGGTGCCTCCAGCTaGGCTGCCAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWRGASS*AARRMS
Trigger: TGACATCCGCCTGGCAGCCCAGCTGGAGGCACCCCG...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGCCTGCTGGCCTCCCTTaGTCCTTGCAAGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLPAGLP*SLQAVG
Trigger: TCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGG...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGCCCCTGTCCACCTGCTaGCCTCCCTTGGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRPLSTC*PPLVLA
Trigger: TGCAAGGACCAAGGGAGGCCAGCAGGTGGACAGGGG...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCACCACGGCACTGCCCTaGAGGGTAACCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGTTALP*RVTTDW
Trigger: CCAGTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTAGGCCTGGGTCCGGTTaGCCACCACGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: CFSKELWILFSVRGAWACRPGSG*PPRHCP
Trigger: AGGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCT...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCAGGCCTGGGTCCGGTTaGCCACCACGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGRPGSG*PPRHCP
Trigger: AGGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCT...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTCACTGTCATGCACGCTaGCCTGTCTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVHCHAR*PVSPPS
Trigger: GGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGTG...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGGTTCCAGGAATGAACTaGGAGAGGACAGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRVPGMN*ERTGGA
Trigger: TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAAC...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCACTGGTTGCCTGGCCTaGCTGGTTCCAGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: GDSSKDLDRWRWMREAICTGCLA*LVPGMN
Trigger: GTTCATTCCTGGAACCAGCCAGGCCAGGCAACCAGT...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACTGTCATGCACGCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: TVMHAGLSHHLPEPGRRGKDLDR*RWMREA
Trigger: CGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTT...TCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGTGGTGCCCTGTGATCTaGCGTGGTGTCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLWCPVI*RGVTGG
Trigger: ACCTCCTGTGACACCACGCCAGATCACAGGGCACCA...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CTCTCCAGCTCCAAGGAGGGCTCCAGAAGACTGATGGACCTCATGACCCCTCGGCGCAGCTCCAGAGCCTaGCGGATCTCTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LSSSKEGSRRLMDLMTPRRSSRA*RISLEV
Trigger: CACTTCCAAAGAGATCCGCCAGGCTCTGGAGCTGCG...CCGAGGGGTCATGAGGTCCATCAGTCTTCTGGAGCCCTCCTTGGAGCTGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp AGGGCTGCAGAGGCTCTTCATGTGAAGACTCGTGGGAAGAGAAGACCTCTGGCACAGTGCGGCAGCAGCTaGGCCGACTCCTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: RAAEALHVKTRGKRRPLAQCGSS*ADSSSQ
Trigger: CTGGGATGAGGAGTCGGCCCAGCTGCTGCCGCACTG...TGCCAGAGGTCTTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTGCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp CCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCTCTTCATGTGAAACGCCCATCTTGCAGTaGACCAGCACGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PPLVLASCGKGCRGSSCETPILQ*TSTWVP
Trigger: GGGCACCCACGTGCTGGTCCACTGCAAGATGGGCGT...TTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGGCGAACGGCTCACTGTaGCCAGGGCCATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWANGSL*PGPWSQ
Trigger: CTGGCTCCATGGCCCTGGTCACAGTGAGCCGTTCGC...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
CDS-3UTR TCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGGAGCGTGGGCATGTGTaGGGGCTCAGGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKERGHV*GLRPRP
Trigger: AGGGCGAGGCCTGAGCCCTCACACATGCCCACGCTC...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGCGGGGGTGGGAGGCGTaGCCCTTTTTGCACGGGAAG +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRRGWEA*PFLHGK
Trigger: CTTCCCGTGCAAAAAGGGTCACGCCTCCCACCCCCG...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGCGGGGGTGGGAGGCGTaGCCCTTTTTGCACGGGAAG +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQRGWEA*PFLHGK
Trigger: CTTCCCGTGCAAAAAGGGTCACGCCTCCCACCCCCG...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp AGGGCTGCAGAGGCTCTTCATGTGAAGACTCGTGGGAAGAGAAGACCTCTGGCATGGCCTGGTGCCCTGTaGTCTGGCGTGGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: RAAEALHVKTRGKRRPLAWPGAL*SGVVSQ
Trigger: CTGTGACACCACGCCAGATCACAGGGCACCAGGCCA...TGCCAGAGGTCTTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTGCAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACATGTTCAAGATGTGGGTaGCCCTGTTCCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTCSRCG*PCSSAA
Trigger: AGCTGCAGAGGAACAGGGTCACCCACATCTTGAACA...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGCAGCACTGTGGCCGCTaGGCGGCTGACGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRQHCGR*AADAHL
Trigger: AAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTG...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CGTGGAGCTCCTCCTCACTCGGGGCCTTCTCTGTTGGCTCAGAACTGGCCTCTGCTCAGAACTGGCCTCTaGTGCATCATCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RGAPPHSGPSLLAQNWPLLRTGL*CIIIVP
Trigger: GGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAG...CAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCGAGTGAGGAGGAGCTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR GCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTTGCAGCTGGGGGAGCTaGTGTCAGGGAAATCCACGC +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGCSWGS*CQGNPR
Trigger: GCGTGGATTTCCCTGACAGCAGCTCCCCCAGCTGCA...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR GCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTGCAGCTGGGGGAGCTaGTGTCAGGGAAATCCACGC +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRCSWGS*CQGNPR
Trigger: GCGTGGATTTCCCTGACAGCAGCTCCCCCAGCTGCA...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR GCA 90 bp CTGGCTCAGACCTTCTCCTTCTCGTGTAGAAACTACCAGCAGGTAGCGGAGCCGTGCAGCTGGGGGAGCTaGTGTCAGGGAAATCCACGC +
Preference number: 4 (lower is better)
Translates to: LAQTFSFSCRNYQQVAEPCSWGS*CQGNPR
Trigger: GCGTGGATTTCCCTGACAGCAGCTCCCCCAGCTGCA...CGGCTCCGCTACCTGCTGGTAGTTTCTACACGAGAAGGAGAAGGTCTGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR GCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCATTGAAGATCCGGCTTTaGCCACCAGACGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: GCLAWLVPGMNWERTGGALKIRL*PPDVTL
Trigger: CAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAA...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGGGCCCCCTGTCCACCTaGTGGCCTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRGPLST*WPPLVL
Trigger: AAGGACCAAGGGAGGCCAGCAGGTGGACAGGGGGCC...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCCCTGCCCCTGCTCCTaGTCCTGGAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRPCPCS*SWKAWV
Trigger: GACCCAGGCCTTCCAGGAGCAGGAGCAGGGGCAGGG...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGGCTGAGAGGAATGTGTaGGGCAACAGACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLAERNV*GNRREG
Trigger: ACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGC...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGATGAAGTCACGGTACTaGTGGAGGGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRMKSRY*WRGSPR
Trigger: CCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCAT...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCGGGCCTGCTCCAGGCTaGATTCGTACTGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGGPAPG*IRTASW
Trigger: CCATGAAGCAGTACGAATGCAGCCTGGAGCAGGCCC...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTGGCTGGCCGTCAGGATaGCCTGGTAGATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGGWPSG*PGRSAA
Trigger: AGCTGCAGATCTACCAGGGCATCCTGACGGCCAGCC...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR GCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCACTCCTTTCCTCTCCCTaGTCGAACCTGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPLLSSP*SNLLSG
Trigger: CCCTGACAGCAGGTTCGAGCAGGGAGAGGAAAGGAG...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376757.9
CDS-3UTR CCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCCCCGCGGACAGTCCTaGACCCGCAGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLPRGQS*TRRTRK
Trigger: CTTCCTGGTCCTGCGGGTCCAGGACTGTCCGCGGGG...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGAGTCGACTCCTTCGCTaGACCGCCTGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQSRLLR*TAWSQG
Trigger: GCCCTGGGACCAGGCGGTCCAGCGAAGGAGTCGACT...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCGGGGTGCCTCCAGCTaGGCTGCCAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLRGASS*AARRMS
Trigger: TGACATCCGCCTGGCAGCCCAGCTGGAGGCACCCCG...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CTCTCCAGCTCCAAGGAGGGCTCCAGAAGACTGATGGACCTCATGACCCCTCGGGCTTGGTGCAATACCTaGAGTGTGGCCCACATGGTC +
Preference number: 4 (lower is better)
Translates to: LSSSKEGSRRLMDLMTPRAWCNT*SVAHMV
Trigger: GACCATGTGGGCCACACTCCAGGTATTGCACCAAGC...CCGAGGGGTCATGAGGTCCATCAGTCTTCTGGAGCCCTCCTTGGAGCTGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp TATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCCTGCTGGCCTCCCTTaGTCCTTGCAAGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: YGAELRGMCAATDVRVFLPAGLP*SLQAVG
Trigger: TCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGG...GAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTAGGGTAACCACTGACTaGCGGGACTTCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGRVTTD*RDFRAG
Trigger: GCCTGCCCTGAAGTCCCGCCAGTCAGTGGTTACCCT...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTAGGCCTGGGTCCGGTTaGCCACCACGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLRPGSG*PPRHCP
Trigger: AGGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCT...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGAAAGTCTTGAGCCCTTaGACAGGCAGACATGGGCCT +
Preference number: 4 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRKVLSP*TGRHGP
Trigger: AGGCCCATGTCTGCCTGTCCAAGGGCTCAAGACTTT...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGKDLDR*RWMREA
Trigger: CGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAAAGTCACGGTACTGCTaGAGGGGGAGCCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLKSRYC*RGSPRR
Trigger: GCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTT...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGATTCGTACTGCTTCATaGCATAGGCCAGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRIRTAS*HRPALW
Trigger: CCACAGTGCTGGCCTATGCCATGAAGCAGTACGAAT...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTCATGGCTCTGGCGGCTaGCCGTCAGGATGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RATGECAGLELRMKLGCCHGSGG*PSGCPG
Trigger: ACCAGGGCATCCTGACGGCCAGCCGCCAGAGCCATG...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR CCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCACGGAAGAGGTGGGAATaGTGTAGAGACTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GCLAWLVPGMNWERTGGARKRWE*CRDFRG
Trigger: GCCCCTGAAGTCTCTACACCATTCCCACCTCTTCCG...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR CCA 90 bp ACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGTCTTTCGGGGCTGCCTaGCTCTCTTCCATGCCTACA +
Preference number: 4 (lower is better)
Translates to: TISGLVPCDLAWCHRRSGSFGAA*LSSMPT
Trigger: TGTAGGCATGGAAGAGAGCCAGGCAGCCCCGAAAGA...CCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGGCGAACGGCTCACTGTaGCCAGGGCCATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKANGSL*PGPWSQ
Trigger: CTGGCTCCATGGCCCTGGTCACAGTGAGCCGTTCGC...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
CDS-3UTR TCA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACACAGAGGCTCTTCATGTaGAGACTCGTGGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTQRLFM*RLVGRE
Trigger: TTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTG...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCATTCCGTGCCACAGGTaGGTGTGCAGGGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGIPCHR*VCRARV
Trigger: AACTCTAGCCCTGCACACTCACCTGTGGCACGGAAT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTACCGGTGGAGGTGGATaGGGGAAGCGATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RATGECAGLELRMKLGCCTGGGG*GKRSAS
Trigger: GCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGT...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGTGGCCTGGTGCCCTGTaGTCTGGCGTGGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWWPGAL*SGVVSQ
Trigger: CTGTGACACCACGCCAGATCACAGGGCACCAGGCCA...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGTGCTGCGTTCCACTCTaGGCCCAGGTAGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQCCVPL*AQVEVG
Trigger: CCCCACCTCTACCTGGGCTCAGAGTGGAACGCAGCA...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GGTGCTCTCCAGCTCCAAGGAGGGCTCCAGAAGACTGATGGACCTCATGACCCCTGTTCAAGATGTGGGTaGCCCTGTTCCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GALQLQGGLQKTDGPHDPCSRCG*PCSSAA
Trigger: AGCTGCAGAGGAACAGGGTCACCCACATCTTGAACA...GGGGTCATGAGGTCCATCAGTCTTCTGGAGCCCTCCTTGGAGCTGGAGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR TCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGGCACATTGTGGTAGGTaGAGCGCTCAGGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLAHCGR*SAQGRS
Trigger: ACTTCTACCCTGAGCGCTTCACCTACCACAATGTGC...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGAGAACTGGCCTCTGCTaGATCATCATTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLRTGLC*IIIVPS
Trigger: GGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCT...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTAGAACTGGCCTCTGCTaGATCATCATTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVRTGLC*IIIVPS
Trigger: GGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCT...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAACCATGAGGTGCAGGTaGTGCCTCTGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRTMRCR*CLCSSC
Trigger: GCAGGAGGAGCAGAGGCAGCACCTGCACCTCATGGT...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTATCGCCTGCTCCATCTaGTCCTGTTCTGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGIACSI*SCSEDP
Trigger: CGGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGAT...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCTCAGCACGGATCGCCTaGTCCATCTGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGSARIA*SICSCS
Trigger: AGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGA...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTAGCTGTGGGAAGGGCTaGAGAGGCTCTTCATGTGAA +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVSCGKG*RGSSCE
Trigger: TTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCT...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCTCAGGCCAGCTGTGGGAAGGGCTaGAGAGGCTCTTCATGTGAA +
Preference number: 4 (lower is better)
Translates to: LWILFSVRGAWACVRAQASCGKG*RGSSCE
Trigger: TTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCT...GGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCCTCTCCACTGTCATaGACGCTGGCCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRSSPLS*TLACLT
Trigger: GGTGAGACAGGCCAGCGTGCATGACAGTGGAGAGGA...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAGGACCAGCACGTGGGTaGCCTGTGCTCTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLGPARG*PVLLQP
Trigger: AGGCTGCAAGAGCACAGGGCACCCACGTGCTGGTCC...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp ATGCACGCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCATTCTGGCCGTCAGGATaGCCTGGTAGATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MHAGLSHHLPEPGRRGNAFWPSG*PGRSAA
Trigger: AGCTGCAGATCTACCAGGGCATCCTGACGGCCAGAA...TGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTAGTCGACTCCTTCGCTaGACCGCCTGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLSRLLR*TAWSQG
Trigger: GCCCTGGGACCAGGCGGTCCAGCGAAGGAGTCGACT...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR CCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGAAGCTCTGCCTTCGCTaGAGTCGACTCCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRKLCLR*SRLLRW
Trigger: CCAGCGAAGGAGTCGACTCCAGCGAAGGCAGAGCTT...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000532881.5
CDS-3UTR CCA 90 bp GCTTCTGGGGACTCTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCCGTGGAGCTCTGTTGGCTCAGAACTaGCCTCTGCTGCATCATCAT +
Preference number: 4 (lower is better)
Translates to: ASGDSGILARSLSGPRGALLAQN*PLLHHH
Trigger: ATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAG...AGCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTATGCCCGAAGTCTGTCTaGTCCCCGTGGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLCPKSV*SPWSSS
Trigger: GGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCA...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTTGCCCGAAGTCTGTCTaGTCCCCGTGGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CFSKELWILFSVRGAWACCPKSV*SPWSSS
Trigger: GGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCA...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCTCTTCATGTGAATGCTCCTCCTGCTTCTaGGGACTCTGGGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: PPLVLASCGKGCRGSSCECSSCF*GLWDPC
Trigger: GCAAGGATCCCAGAGTCCCCAGAAGCAGGAGGAGCA...TTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCACCATCTAAGTACACCTaGGTGTCACTCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPPSKYT*VSLQRG
Trigger: GCCCCTCTGGAGTGACACCCAGGTGTACTTAGATGG...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCAGTGGCCCACATGGTCTaGATGGAGATGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPVAHMV*MEMGLK
Trigger: CTTCAAGCCCATCTCCATCCAGACCATGTGGGCCAC...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGGGAGTGTGGCCCACATaGTCTGGATGGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRGVWPT*SGWRWA
Trigger: AGCCCATCTCCATCCAGACCATGTGGGCCACACTCC...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTGGAGTGTGGCCCACATaGTCTGGATGGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGGVWPT*SGWRWA
Trigger: AGCCCATCTCCATCCAGACCATGTGGGCCACACTCC...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGCCCCTGTCCACCTGCTaGCCTCCCTTGGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWPLSTC*PPLVLA
Trigger: TGCAAGGACCAAGGGAGGCCAGCAGGTGGACAGGGG...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTTGCTCCTGGAAGGCCTaGGTCCGGTTGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLCSWKA*VRLATT
Trigger: CGTGGTGGCCAACCGGACCCAGGCCTTCCAGGAGCA...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCAACTGGTTGCCTGGCCTaGCTGGTTCCAGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: WGGAERNVCGNRREGVSPTGCLA*LVPGMN
Trigger: GTTCATTCCTGGAACCAGCCAGGCCAGGCAACCAGT...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGATCCTGCCTGCCTTTaGGGGCCACTGGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQDPACL*GPLVAW
Trigger: CCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATC...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGGATCCTGCCTGCCTTTaGGGGCCACTGGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRDPACL*GPLVAW
Trigger: CCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATC...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGCCAGCCTCCCGCGGCTaGGGCCTGAGGATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLPASRG*GLRILP
Trigger: AGGCAGGATCCTCAGGCCCCAGCCGCGGGAGGCTGG...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGTGTCACAGGAGGTCTaGGGACAGCAGCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLVSQEV*GQQQRP
Trigger: AGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACAC...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCGCAGCTCCAGAGCCTaGCGGATCTCTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGRSSRA*RISLEV
Trigger: CACTTCCAAAGAGATCCGCCAGGCTCTGGAGCTGCG...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGTTGCCTGGCCTGGCTGGTTCCAGGAATGAACTGGGAGAGGACAGGAGGTGCAACCAGCAGCAGCATCTaGTTGTCGATGAAGTCACGG +
Preference number: 4 (lower is better)
Translates to: GCLAWLVPGMNWERTGGATSSSI*LSMKSR
Trigger: CCGTGACTTCATCGACAACCAGATGCTGCTGCTGGT...TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCCAGGCCAGGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCTCGGAGGTTTATACGTaGCCGTGGCCCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: YGAELRGMCAATDVRVFLSEVYT*PWPRLF
Trigger: GAAGAGCCTGGGCCACGGCCACGTATAAACCTCCGA...GAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGCTTCGCTGGACCGCCTaGTCCTGCGGAGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKLRWTA*SCGESS
Trigger: GCTGCTCTCTCCGCAGGACCAGGCGGTCCAGCGAAG...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376757.9
CDS-3UTR TCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCCACCAGACGTCACGCTaGAGCCCCCGTCTCCATCTA +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGHQTSR*SPRLHL
Trigger: TAGATGGAGACGGGGGCTTCAGCGTGACGTCTGGTG...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAGGATGGAGATGGGCTTaGAGATCCGGCTTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRGWRWA*RSGFAH
Trigger: GTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCC...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCTGGAGGGTAACCACTaGCTGGCGGGACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLLEGNH*LAGLQG
Trigger: GCCCTGAAGTCCCGCCAGTCAGTGGTTACCCTCCAG...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGGGTATGGGGCGGAGCTaGGAGGAATGTGTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRGMGRS*EECVRQ
Trigger: TTGCCGCACACATTCCTCTCAGCTCCGCCCCATACC...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGGTATGGGGCGGAGCTaGGAGGAATGTGTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: CFSKELWILFSVRGAWACGMGRS*EECVRQ
Trigger: TTGCCGCACACATTCCTCTCAGCTCCGCCCCATACC...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCGGTATGGGGCGGAGCTaGGAGGAATGTGTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGGMGRS*EECVRQ
Trigger: TTGCCGCACACATTCCTCTCAGCTCCGCCCCATACC...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTACCGGTGGAGGTGGATaGGGGAAGCGATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLTGGGG*GKRSAS
Trigger: GCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGT...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTGGCCTGGTGCCCTGTaGTCTGGCGTGGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKWPGAL*SGVVSQ
Trigger: CTGTGACACCACGCCAGATCACAGGGCACCAGGCCA...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCACTCTCCAGGTCACTaGCATCCAACACTTTCCACA +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLHSPGH*HPTLST
Trigger: TGTGGAAAGTGTTGGATGTCAGTGACCTGGAGAGTG...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CAGAAGACTGATGGACCTCATGACCCCTCGGAGGTTTATACGTGGCCGTGGCCCGCATCTGGTTGTCGATaGAGTCACGGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QKTDGPHDPSEVYTWPWPASGCR*SHGTAG
Trigger: TCCAGCAGTACCGTGACTTCATCGACAACCAGATGC...GGGCCACGGCCACGTATAAACCTCCGAGGGGTCATGAGGTCCATCAGTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAAGGCGGATGTCATCCTaGGGCCTCAGCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLRRMSS*GLSSCT
Trigger: GGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCT...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTACCGGTACAAGGCCGCTaGCTAGAGCTGCCTCACATG +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLPVQGR*LELPHM
Trigger: CATGTGAGGCAGCTCTAGGCAGCGGCCTTGTACCGG...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAGGGTGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGTCAGCACGGATCGCCTaGTCCATCTGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: EGVSPRSCGSSSVSGERGSARIA*SICSCS
Trigger: AGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGA...CCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGAAACTAGGGTGCTGTTaGCCCCAAAGGTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLKLGCC*PQRYLQ
Trigger: CTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTT...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCAGGGCTCTAAACTAGGGTGCTGTTaGCCCCAAAGGTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: LACLTTFRNLGVEEMQGSKLGCC*PQRYLQ
Trigger: CTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTT...AGAGCCCTGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR GCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTAGGCGTGACCCTTTTTaGACGGGAAGCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVRRDPF*TGSSVF
Trigger: GAAAACAGAGCTTCCCGTGCAAAAAGGGTCACGCCT...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCATGAGGGAAGCGATCTaGCAGCCCTTCCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGMREAI*QPFQPP
Trigger: GGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCAT...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTATGAGGGAAGCGATCTaGCAGCCCTTCCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RATGECAGLELRMKLGCCMREAI*QPFQPP
Trigger: GGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCAT...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGACTATCTCTGGCCTGGTaGCCTGTGATCTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRLSLAW*PVIWRG
Trigger: ACCACGCCAGATCACAGGGCACCAGGCCAGAGATAG...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAGGGTGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCCTGGCTCTCTTCCATaGCTACAACCTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: EGVSPRSCGSSSVSGERGPGSLP*LQPSPP
Trigger: GGGAGGAGAAGGTTGTAGGCATGGAAGAGAGCCAGG...CCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AGGGCTGCAGAGGCTCTTCATGTGAAGACTCGTGGGAAGAGAAGACCTCTGGCACTCTTCTTTCGGGGCTaGCTGGCTCTCTTCCATGCC +
Preference number: 4 (lower is better)
Translates to: RAAEALHVKTRGKRRPLALFFRG*LALFHA
Trigger: GGCATGGAAGAGAGCCAGGCAGCCCCGAAAGAAGAG...TGCCAGAGGTCTTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTGCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp AGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGAGGACCGTCTCATCCTaGCTCAGACCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLSLAWCPVIWRGVTGGLRTVSS*LRPSPS
Trigger: AGAAGGAGAAGGTCTGAGCCAGGATGAGACGGTCCT...CAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGGCTTGGTGCAATACCTaGAGTGTGGCCCACATGGTC +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRAWCNT*SVAHMV
Trigger: GACCATGTGGGCCACACTCCAGGTATTGCACCAAGC...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGGCTGCCTCACATGCTTaGTGCAATACCTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGAASHA*CNTWSV
Trigger: CACACTCCAGGTATTGCACCAAGCATGTGAGGCAGC...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TCATGCACGCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGGCTGCCTCACATGCTTaGTGCAATACCTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SCTLACLTTFRNLGVEEMAASHA*CNTWSV
Trigger: CACACTCCAGGTATTGCACCAAGCATGTGAGGCAGC...CATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAGGTCCTTGCAAGCTGTaGGAAGGGCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLGPCKL*EGLQRL
Trigger: GAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACC...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGGGTCCTTGCAAGCTGTaGGAAGGGCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRGPCKL*EGLQRL
Trigger: GAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACC...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCCCCTGTCCACCTGCTaGCCTCCCTTGGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRPLSTC*PPLVLA
Trigger: TGCAAGGACCAAGGGAGGCCAGCAGGTGGACAGGGG...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGACCACGGCACTGCCCTaGAGGGTAACCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQTTALP*RVTTDW
Trigger: CCAGTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGT...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGGATCCTGCCTGCCTTTaGGGGCCACTGGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKDPACL*GPLVAW
Trigger: CCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATC...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGCTGGACCGGTGGAGGTaGATGAGGGAAGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWLDRWR*MREAIC
Trigger: GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAG...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTAGACTATCTCTGGCCTaGTGCCCTGTGATCTGGCGT +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGRLSLA*CPVIWR
Trigger: ACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCACCAGCAGCAGCATCTaGTTGTCGATGAAGTCACGG +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGTSSSI*LSMKSR
Trigger: CCGTGACTTCATCGACAACCAGATGCTGCTGCTGGT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGACGCCCATCTTGCAGTaGACCAGCACGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRTPILQ*TSTWVP
Trigger: GGGCACCCACGTGCTGGTCCACTGCAAGATGGGCGT...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTTCCCAGACATGGCTCTaGCGGCTGGCCGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLSQTWL*RLAVRM
Trigger: CATCCTGACGGCCAGCCGCCAGAGCCATGTCTGGGA...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR CCA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGTTCTGGCGGAAGAGGTaGGAATGGTGTAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLFWRKR*EWCRDF
Trigger: GAAGTCTCTACACCATTCCCACCTCTTCCGCCAGAA...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR CCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAACCACCCTCAGGTTCTaGCGGAAGAGGTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRTTLRF*RKRWEW
Trigger: CCATTCCCACCTCTTCCGCCAGAACCTGAGGGTGGT...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR TCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGGGATGGAGATGGGCTTaGAGATCCGGCTTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRGWRWA*RSGFAH
Trigger: GTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCC...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGTGCGGCAACAGACGTaGGGGTGTTTCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQVRQQT*GCFSKE
Trigger: CTCCTTGGAGAAACACCCTCACGTCTGTTGCCGCAC...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCCAGTTAGAAAGTCTTaGGCCCTTGGACAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGPVRKS*ALGQAD
Trigger: GTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGG...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTGGCTGGTTCCAGGAATaGACTGGGAGAGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: RATGECAGLELRMKLGCCGWFQE*TGRGQE
Trigger: CTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCC...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGCACTCTCCAGGTCACTaGCATCCAACACTTTCCACA +
Preference number: 4 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGHSPGH*HPTLST
Trigger: TGTGGAAAGTGTTGGATGTCAGTGACCTGGAGAGTG...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGCATCTGGTTGTCGATaGAGTCACGGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSASGCR*SHGTAG
Trigger: TCCAGCAGTACCGTGACTTCATCGACAACCAGATGC...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTGCACATTGTGGTAGGTaGAGCGCTCAGGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGAHCGR*SAQGRS
Trigger: ACTTCTACCCTGAGCGCTTCACCTACCACAATGTGC...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAGGGTGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGAGAACTGGCCTCTGCTaGATCATCATTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EGVSPRSCGSSSVSGERGRTGLC*IIIVPS
Trigger: GGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCT...CCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTAGAACTGGCCTCTGCTaGATCATCATTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGRTGLC*IIIVPS
Trigger: GGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCT...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCCGGTACAAGGCCGCTaGCTAGAGCTGCCTCACATG +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRPVQGR*LELPHM
Trigger: CATGTGAGGCAGCTCTAGGCAGCGGCCTTGTACCGG...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCATCGCCTGCTCCATCTaGTCCTGTTCTGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGIACSI*SCSEDP
Trigger: CGGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGAT...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAATCGCCTGCTCCATCTaGTCCTGTTCTGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLIACSI*SCSEDP
Trigger: CGGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGAT...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTATCGCCTGCTCCATCTaGTCCTGTTCTGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: CFSKELWILFSVRGAWACIACSI*SCSEDP
Trigger: CGGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGAT...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGTCCTCTCCACTGTCATaGACGCTGGCCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWSSPLS*TLACLT
Trigger: GGTGAGACAGGCCAGCGTGCATGACAGTGGAGAGGA...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGAGGCGTGACCCTTTTTaGACGGGAAGCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGRRDPF*TGSSVF
Trigger: GAAAACAGAGCTTCCCGTGCAAAAAGGGTCACGCCT...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGATGAGGGAAGCGATCTaGCAGCCCTTCCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKMREAI*QPFQPP
Trigger: GGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCAT...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGACCCCACCCACTTTCTaGTCCCAGACATGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQTPPTF*SQTWLW
Trigger: CCAGAGCCATGTCTGGGAGCAGAAAGTGGGTGGGGT...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR GCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCCTCTTCTTTCGGGGCTaGCTGGCTCTCTTCCATGCC +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGLFFRG*LALFHA
Trigger: GGCATGGAAGAGAGCCAGGCAGCCCCGAAAGAAGAG...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGCTCTTCTTTCGGGGCTaGCTGGCTCTCTTCCATGCC +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQLFFRG*LALFHA
Trigger: GGCATGGAAGAGAGCCAGGCAGCCCCGAAAGAAGAG...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGCTCCCTGCTCGAACCTaGTGTCAGGGAAATCCACGC +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRLPART*CQGNPR
Trigger: GCGTGGATTTCCCTGACAGCAGGTTCGAGCAGGGAG...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376757.9
CDS-3UTR CCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGACCATCTAAGTACACCTaGGTGTCACTCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRPSKYT*VSLQRG
Trigger: GCCCCTCTGGAGTGACACCCAGGTGTACTTAGATGG...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGAGTGTGGCCCACATaGTCTGGATGGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQGVWPT*SGWRWA
Trigger: AGCCCATCTCCATCCAGACCATGTGGGCCACACTCC...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTTCTCCAAGGAGTTGTaGATCCTCTTCAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RVWGGAERNVCGNRREGVFSKEL*ILFSVR
Trigger: CCTGACACTGAAGAGGATCCACAACTCCTTGGAGAA...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCTGGACCGGTGGAGGTaGATGAGGGAAGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRLDRWR*MREAIC
Trigger: GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAG...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGAAAGACCTGGACCGGTaGAGGTGGATGAGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRKDLDR*RWMREA
Trigger: CGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTT...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGTGGTGCCCTGTGATCTaGCGTGGTGTCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWWCPVI*RGVTGG
Trigger: ACCTCCTGTGACACCACGCCAGATCACAGGGCACCA...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCACCAGCAGCAGCATCTaGTTGTCGATGAAGTCACGG +
Preference number: 4 (lower is better)
Translates to: YGAELRGMCAATDVRVFLTSSSI*LSMKSR
Trigger: CCGTGACTTCATCGACAACCAGATGCTGCTGCTGGT...GAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTCGGAGGTTTATACGTaGCCGTGGCCCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGSEVYT*PWPRLF
Trigger: GAAGAGCCTGGGCCACGGCCACGTATAAACCTCCGA...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGTCGGAGGTTTATACGTaGCCGTGGCCCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWSEVYT*PWPRLF
Trigger: GAAGAGCCTGGGCCACGGCCACGTATAAACCTCCGA...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTACGCAAAGCTCTTCGCTaGAGTCGACTCCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLRKALR*SRLLRW
Trigger: CCAGCGAAGGAGTCGACTCCAGCGAAGAGCTTTGCG...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376757.9
CDS-3UTR TCA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTCAGAGGCTCTTCATGTaGAGACTCGTGGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSQRLFM*RLVGRE
Trigger: TTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTG...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTGGCTGGTTCCAGGAATaGACTGGGAGAGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLGWFQE*TGRGQE
Trigger: CTCCTGTCCTCTCCCAGTTCATTCCTGGAACCAGCC...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCCTCAGAACTGGCCTCTaGTGCATCATCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ETRVLLPPKVPSVPLPHPLRTGL*CIIIVP
Trigger: GGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAG...GGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAACCATGAGGTGCAGGTaGTGCCTCTGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLTMRCR*CLCSSC
Trigger: GCAGGAGGAGCAGAGGCAGCACCTGCACCTCATGGT...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCCTCTCCACTGTCATaGACGCTGGCCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKSSPLS*TLACLT
Trigger: GGTGAGACAGGCCAGCGTGCATGACAGTGGAGAGGA...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGGCTGAGAGGAATGTGTaGGGCAACAGACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWAERNV*GNRREG
Trigger: ACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGC...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GAGGGTGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGAGGCGTGACCCTTTTTaGACGGGAAGCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: EGVSPRSCGSSSVSGERGRRDPF*TGSSVF
Trigger: GAAAACAGAGCTTCCCGTGCAAAAAGGGTCACGCCT...CCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCTATCTCTGGCCTGGTaGCCTGTGATCTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRLSLAW*PVIWRG
Trigger: ACCACGCCAGATCACAGGGCACCAGGCCAGAGATAG...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTGGGCCTGCTCCAGGCTaGATTCGTACTGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLGPAPG*IRTASW
Trigger: CCATGAAGCAGTACGAATGCAGCCTGGAGCAGGCCC...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGGGGCCTGCTCCAGGCTaGATTCGTACTGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRGPAPG*IRTASW
Trigger: CCATGAAGCAGTACGAATGCAGCCTGGAGCAGGCCC...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGCTGTTGGCTCAGAACTaGCCTCTGCTGCATCATCAT +
Preference number: 4 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRLLAQN*PLLHHH
Trigger: ATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAG...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGTGCTTCTGGGGACTCTaGGATCCTTGCCCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWCFWGL*DPCPKS
Trigger: AGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCA...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGTGCTTCTGGGGACTCTaGGATCCTTGCCCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQCFWGL*DPCPKS
Trigger: AGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCA...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGTGCTCCTCCTGCTTCTaGGGACTCTGGGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRCSSCF*GLWDPC
Trigger: GCAAGGATCCCAGAGTCCCCAGAAGCAGGAGGAGCA...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAGGACCGTCTCATCCTaGCTCAGACCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRRTVSS*LRPSPS
Trigger: AGAAGGAGAAGGTCTGAGCCAGGATGAGACGGTCCT...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCCCATCTAAGTACACCTaGGTGTCACTCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGPSKYT*VSLQRG
Trigger: GCCCCTCTGGAGTGACACCCAGGTGTACTTAGATGG...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGCCATCTAAGTACACCTaGGTGTCACTCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRPSKYT*VSLQRG
Trigger: GCCCCTCTGGAGTGACACCCAGGTGTACTTAGATGG...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGGGAGTGTGGCCCACATaGTCTGGATGGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRGVWPT*SGWRWA
Trigger: AGCCCATCTCCATCCAGACCATGTGGGCCACACTCC...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGCTTGGTGCAATACCTaGAGTGTGGCCCACATGGTC +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQAWCNT*SVAHMV
Trigger: GACCATGTGGGCCACACTCCAGGTATTGCACCAAGC...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACAGGGTAACCACTGACTaGCGGGACTTCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYRVTTD*RDFRAG
Trigger: GCCTGCCCTGAAGTCCCGCCAGTCAGTGGTTACCCT...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAACCACGGCACTGCCCTaGAGGGTAACCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLTTALP*RVTTDW
Trigger: CCAGTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGT...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCACTGTCATGCACGCTaGCCTGTCTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRHCHAR*PVSPPS
Trigger: GGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGTG...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGACTGGTTGCCTGGCCTaGCTGGTTCCAGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQTGCLA*LVPGMN
Trigger: GTTCATTCCTGGAACCAGCCAGGCCAGGCAACCAGT...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTAGACTATCTCTGGCCTaGTGCCCTGTGATCTGGCGT +
Preference number: 4 (lower is better)
Translates to: RATGECAGLELRMKLGCCRLSLA*CPVIWR
Trigger: ACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCT...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACAGTGGACCAGCACGTaGGTGCCCTGTGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLQWTST*VPCALA
Trigger: TGCAAGAGCACAGGGCACCCACGTGCTGGTCCACTG...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTCGGAAGAGGTGGGAATaGTGTAGAGACTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CFSKELWILFSVRGAWACRKRWE*CRDFRG
Trigger: GCCCCTGAAGTCTCTACACCATTCCCACCTCTTCCG...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR CCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCGTTTATACGTGGCCGTaGCCCAGGCTCTTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGVYTWP*PRLFFR
Trigger: CCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAAC...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGTTTATACGTGGCCGTaGCCCAGGCTCTTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQVYTWP*PRLFFR
Trigger: CCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAAC...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACGTGCGGCAACAGACGTaGGGGTGTTTCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYVRQQT*GCFSKE
Trigger: CTCCTTGGAGAAACACCCTCACGTCTGTTGCCGCAC...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTCCAGTTAGAAAGTCTTaGGCCCTTGGACAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RATGECAGLELRMKLGCCPVRKS*ALGQAD
Trigger: GTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGG...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCAAGGCTATGAAAAACTaGCTAGCCAGAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGKAMKN*LARGQK
Trigger: TTTCTGGCCTCTGGCTAGTCAGTTTTTCATAGCCTT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCGCACATTGTGGTAGGTaGAGCGCTCAGGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGAHCGR*SAQGRS
Trigger: ACTTCTACCCTGAGCGCTTCACCTACCACAATGTGC...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGCTCAGAACTGGCCTCTaGTGCATCATCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWLRTGL*CIIIVP
Trigger: GGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAG...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGTTGAAGATCCGGCTTTaGCCACCAGACGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRLKIRL*PPDVTL
Trigger: CAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAA...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTTCAGCACGGATCGCCTaGTCCATCTGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLSARIA*SICSCS
Trigger: AGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGA...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAAGCTGTGGGAAGGGCTaGAGAGGCTCTTCATGTGAA +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLSCGKG*RGSSCE
Trigger: TTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCT...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTATCCTCTCCACTGTCATaGACGCTGGCCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLSSPLS*TLACLT
Trigger: GGTGAGACAGGCCAGCGTGCATGACAGTGGAGAGGA...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAACTAGGGTGCTGTTaGCCCCAAAGGTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRKLGCC*PQRYLQ
Trigger: CTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTT...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCTATCTCTGGCCTGGTaGCCTGTGATCTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYLSLAW*PVIWRG
Trigger: ACCACGCCAGATCACAGGGCACCAGGCCAGAGATAG...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGATGAAGTCACGGTACTaGTGGAGGGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLMKSRY*WRGSPR
Trigger: CCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCAT...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp ACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGGTGACCCTGTTCCTCTaGAGCTCCTCCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TFSPSTTSQLESLEPLDRVTLFL*SSSRFA
Trigger: AGCAAACCTGGAGGAGCTGCAGAGGAACAGGGTCAC...CCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGCCTCAATGAAGCGGTaGGTCTCCTTCCAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLASMKR*VSFQCG
Trigger: GCCGCACTGGAAGGAGACGCACCGCTTCATTGAGGC...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCCTGGCTCTCTTCCATaGCTACAACCTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLPGSLP*LQPSPP
Trigger: GGGAGGAGAAGGTTGTAGGCATGGAAGAGAGCCAGG...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACTGCTCCTCCTGCTTCTaGGGACTCTGGGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYCSSCF*GLWDPC
Trigger: GCAAGGATCCCAGAGTCCCCAGAAGCAGGAGGAGCA...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCTAAGGACCGTCTCATCCTaGCTCAGACCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FAREALFSFRATGECAGLRTVSS*LRPSPS
Trigger: AGAAGGAGAAGGTCTGAGCCAGGATGAGACGGTCCT...TAGCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTGTGGCCCACATGGTCTaGATGGAGATGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLVAHMV*MEMGLK
Trigger: CTTCAAGCCCATCTCCATCCAGACCATGTGGGCCAC...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGGTCCTTGCAAGCTGTaGGAAGGGCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLGPCKL*EGLQRL
Trigger: GAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACC...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACACTGTCATGCACGCTaGCCTGTCTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLHCHAR*PVSPPS
Trigger: GGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGTG...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTTTCTCCAAGGAGTTGTaGATCCTCTTCAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGFSKEL*ILFSVR
Trigger: CCTGACACTGAAGAGGATCCACAACTCCTTGGAGAA...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGTTCCAGGAATGAACTaGGAGAGGACAGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQVPGMN*ERTGGA
Trigger: TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAAC...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCGTTCCAGGAATGAACTaGGAGAGGACAGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGVPGMN*ERTGGA
Trigger: TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAAC...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGGTTCCAGGAATGAACTaGGAGAGGACAGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRVPGMN*ERTGGA
Trigger: TGCACCTCCTGTCCTCTCCCAGTTCATTCCTGGAAC...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACTGGTGCCCTGTGATCTaGCGTGGTGTCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYWCPVI*RGVTGG
Trigger: ACCTCCTGTGACACCACGCCAGATCACAGGGCACCA...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTATGGTGCCCTGTGATCTaGCGTGGTGTCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLWCPVI*RGVTGG
Trigger: ACCTCCTGTGACACCACGCCAGATCACAGGGCACCA...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAATTCGTACTGCTTCATaGCATAGGCCAGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRIRTAS*HRPALW
Trigger: CCACAGTGCTGGCCTATGCCATGAAGCAGTACGAAT...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGGATGGAGATGGGCTTaGAGATCCGGCTTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLGWRWA*RSGFAH
Trigger: GTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCC...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTCAGAGGCTCTTCATGTaGAGACTCGTGGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: CFSKELWILFSVRGAWACQRLFM*RLVGRE
Trigger: TTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTG...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCCAGTTAGAAAGTCTTaGGCCCTTGGACAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLPVRKS*ALGQAD
Trigger: GTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGG...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAATTCCGTGCCACAGGTaGGTGTGCAGGGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLIPCHR*VCRARV
Trigger: AACTCTAGCCCTGCACACTCACCTGTGGCACGGAAT...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTAAGGCTATGAAAAACTaGCTAGCCAGAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSKAMKN*LARGQK
Trigger: TTTCTGGCCTCTGGCTAGTCAGTTTTTCATAGCCTT...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGCTCAGAACTGGCCTCTaGTGCATCATCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: CCCPQRYLQSLYHIPVRKLRTGL*CIIIVP
Trigger: GGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAG...CTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCAAACTAGGGTGCTGTTaGCCCCAAAGGTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGKLGCC*PQRYLQ
Trigger: CTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTT...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGAGGCGTGACCCTTTTTaGACGGGAAGCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQRRDPF*TGSSVF
Trigger: GAAAACAGAGCTTCCCGTGCAAAAAGGGTCACGCCT...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAGTGTCACAGGAGGTCTaGGGACAGCAGCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLVSQEV*GQQQRP
Trigger: AGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACAC...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACTCTTTCGGGGCTGCCTaGCTCTCTTCCATGCCTACA +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYSFGAA*LSSMPT
Trigger: TGTAGGCATGGAAGAGAGCCAGGCAGCCCCGAAAGA...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTATCTTTCGGGGCTGCCTaGCTCTCTTCCATGCCTACA +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLSFGAA*LSSMPT
Trigger: TGTAGGCATGGAAGAGAGCCAGGCAGCCCCGAAAGA...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAGTTTATACGTGGCCGTaGCCCAGGCTCTTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLVYTWP*PRLFFR
Trigger: CCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAAC...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACGCATCTGGTTGTCGATaGAGTCACGGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYASGCR*SHGTAG
Trigger: TCCAGCAGTACCGTGACTTCATCGACAACCAGATGC...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACAGCTGTGGGAAGGGCTaGAGAGGCTCTTCATGTGAA +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYSCGKG*RGSSCE
Trigger: TTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCT...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR GCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGTGACCCTGTTCCTCTaGAGCTCCTCCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLVTLFL*SSSRFA
Trigger: AGCAAACCTGGAGGAGCTGCAGAGGAACAGGGTCAC...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCTGTTGGCTCAGAACTaGCCTCTGCTGCATCATCAT +
Preference number: 4 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLLLAQN*PLLHHH
Trigger: ATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAG...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACGCTGCCTCACATGCTTaGTGCAATACCTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYAASHA*CNTWSV
Trigger: CACACTCCAGGTATTGCACCAAGCATGTGAGGCAGC...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTTTCTCCAAGGAGTTGTaGATCCTCTTCAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: CFSKELWILFSVRGAWACFSKEL*ILFSVR
Trigger: CCTGACACTGAAGAGGATCCACAACTCCTTGGAGAA...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAAAAGTCTTGAGCCCTTaGACAGGCAGACATGGGCCT +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLKVLSP*TGRHGP
Trigger: AGGCCCATGTCTGCCTGTCCAAGGGCTCAAGACTTT...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
3UTR CAA 72 bp TGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTaGCCCCCAAAGGTACCTTCAGTCCCTCTACCACAT +
Preference number: 4 (lower is better)
Translates to: CRARVENETRVL*PPKVPSVPLPH
Trigger: ATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR TCA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGAAGGCTATGAAAAACTaGCTAGCCAGAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRKAMKN*LARGQK
Trigger: TTTCTGGCCTCTGGCTAGTCAGTTTTTCATAGCCTT...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTATTCTGGCGGAAGAGGTaGGAATGGTGTAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: VENETRVLLPPKVPSVPLFWRKR*EWCRDF
Trigger: GAAGTCTCTACACCATTCCCACCTCTTCCGCCAGAA...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308127.9
ENST00000376757.9
CDS-3UTR TCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGCAGAGGCTCTTCATGTaGAGACTCGTGGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLQRLFM*RLVGRE
Trigger: TTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTG...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CCA 90 bp AAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGATTCGTACTGCTTCATaGCATAGGCCAGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: KGTFSPSTTSQLESLEPLIRTAS*HRPALW
Trigger: CCACAGTGCTGGCCTATGCCATGAAGCAGTACGAAT...CAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS CCA 90 bp GCTGGCACCGGGCACGGCCCCTTCCCTCAACCCCGCGGACAGTCCTaGACCCGCAGGACCAGGAAGGACGGACGGCGCCACCCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: AGTGHGPFPQPRGQS*TRRTRKDGRRHPGL
Trigger: CAGGCCCGGGTGGCGCCGTCCGTCCTTCCTGGTCCTGCGGGTCCAGGACTGTCCGCGGGGTTGAGGGAAGGGGCCGTGCCCGGTGCCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308298.11
ENST00000376757.9
CDS CCA 90 bp CTCACTGTGACCAGGGCCATGGAGCCAGGCCGCGAGCACCTGGGCTaGCACCGGGCACGGCCCCTTCCCTCAACCCCGCGGACAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LTVTRAMEPGREHLG*HRARPLPSTPRTVL
Trigger: CAGGACTGTCCGCGGGGTTGAGGGAAGGGGCCGTGCCCGGTGCCAGCCCAGGTGCTCGCGGCCTGGCTCCATGGCCCTGGTCACAGTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532600.1
CDS CCA 90 bp GGTAGATCTGCAGCTGGCGCAGGAAGCCAGGGTTGGGGCGGGCGATaGGCCGGAGCTCCTGCACGTGGCGCAGGGCCTGCTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GRSAAGAGSQGWGGR*AGAPARGAGPAPGC
Trigger: GCAGCCTGGAGCAGGCCCTGCGCCACGTGCAGGAGCTCCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGCGCCAGCTGCAGATCTACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000531495.1
ENST00000532881.5
CDS-3UTR CAA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTAAGGCCTGGGTCCGGTaGGCCACCACGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPKAWVR*ATTALP
Trigger: GGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTT...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGAAGGCCTGGGTCCGGTaGGCCACCACGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRKAWVR*ATTALP
Trigger: GGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTT...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCGCAGGAAGCCAGGGTaGGGGCGGGCGATGGGCCGG +
Preference number: 5 (lower is better)
Translates to: WGQQQRPGPVEVDEGSDLRRKPG*GRAMGR
Trigger: CCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGCG...CAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGGACTCTGGGATCCTaGCCCGAAGTCTGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPGTLGS*PEVCLV
Trigger: GACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCC...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCCGCGGCTACCTGCTGGCCTCCCTaGGTCCTTGCAAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RWRWMREAICQPFQPPAATCWPP*VLASCG
Trigger: CCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGT...AGCCGCGGGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TCATGCACGCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCGCAGGAAGCCAGGGTaGGGGCGGGCGATGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SCTLACLTTFRNLGVEEMRRKPG*GRAMGR
Trigger: CCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGCG...CATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS TCA 90 bp AGGCTCGGTCCCGCTGTGCCACCAGCAGCAGCATCTGGTTGTCGATaGAGTCACGGTACTGCTGGAGGGGGAGCCCCAGGCGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RLGPAVPPAAASGCR*SHGTAGGGAPGAAP
Trigger: TGGAGCTGCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCATCGACAACCAGATGCTGCTGCTGGTGGCACAGCGGGACCGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000529224.1
ENST00000532181.5
ENST00000532881.5
CDS-3UTR CAA 90 bp TGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTGGCTGCAGCTCCTCCAGGTTaGCTGCGTTCCACTCTGAGC +
Preference number: 5 (lower is better)
Translates to: WGLRILPAFGGHWLPGLAAAPPG*LRSTLS
Trigger: GCTCAGAGTGGAACGCAGCAAACCTGGAGGAGCTGC...AGCCAGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS TCA 90 bp CGTACTGCTTCATGGCATAGGCCAGCACTGTGGCCGCTGAGCGGCTaGCGCCCATCTTGCAGTGGACCAGCACGTGGGTGCCCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: RTASWHRPALWPLSG*RPSCSGPARGCPVL
Trigger: GAGCACAGGGCACCCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTGGCCTATGCCATGAAGCAGTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000531495.1
ENST00000532881.5
CDS CCA 90 bp AAGATGCGGGAGGCTCGGTCCCGCTGTGCCACCAGCAGCAGCATCTaGTTGTCGATGAAGTCACGGTACTGCTGGAGGGGGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: KMREARSRCATSSSI*LSMKSRYCWRGSPR
Trigger: CCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCATCGACAACCAGATGCTGCTGCTGGTGGCACAGCGGGACCGAGCCTCCCGCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000529224.1
ENST00000532181.5
ENST00000532881.5
CDS-3UTR CAA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCGGGACTCTGGGATCCTaGCCCGAAGTCTGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSGTLGS*PEVCLV
Trigger: GACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCC...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCGCAGCTCCTCCAGGTTaGCTGCGTTCCACTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GLVPCDLAWCHRRSGDSSAAPPG*LRSTLS
Trigger: GCTCAGAGTGGAACGCAGCAAACCTGGAGGAGCTGC...GCTGCTGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACACGGCTGACGCCCATCTaGCAGTGGACCAGCACGTGG +
Preference number: 5 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTRLTPI*QWTSTW
Trigger: CCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCG...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GAGGTTTATACGTGGCCGTGGCCCAGGCTCTTCTTTCGGGGCTGCCTGGCTCTCCGGCTGACGCCCATCTaGCAGTGGACCAGCACGTGG +
Preference number: 5 (lower is better)
Translates to: EVYTWPWPRLFFRGCLALRLTPI*QWTSTW
Trigger: CCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCG...GAGAGCCAGGCAGCCCCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS TCA 90 bp GCTGCATTCGTACTGCTTCATGGCATAGGCCAGCACTGTGGCCGCTaGGCGGCTGACGCCCATCTTGCAGTGGACCAGCACGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: AAFVLLHGIGQHCGR*AADAHLAVDQHVGA
Trigger: GGCACCCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTGGCCTATGCCATGAAGCAGTACGAATGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000531495.1
ENST00000532881.5
CDS-3UTR CAA 90 bp CTGGGATCCTTGCCCGAAGTCTGTCTGGTCCCCGTGGAGCTCCTCCTCACTCGGGGGACTCTGGGATCCTaGCCCGAAGTCTGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LGSLPEVCLVPVELLLTRGTLGS*PEVCLV
Trigger: GACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCC...CCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CAA 90 bp CGGCTGGGGCCTGAGGATCCTGCCTGCCTTTGGGGGCCACTGGTTGCCTGGCCTAGCTGCCTCACATGCTaGGTGCAATACCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: RLGPEDPACLWGPLVAWPSCLTC*VQYLEC
Trigger: ACACTCCAGGTATTGCACCAAGCATGTGAGGCAGCT...AGGCCAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCCTCAGGCCCCAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GAGGTTTATACGTGGCCGTGGCCCAGGCTCTTCTTTCGGGGCTGCCTGGCTCTCGGCCTCCCTTGGTCCTaGCAAGCTGTGGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: EVYTWPWPRLFFRGCLALGLPWS*QAVGRA
Trigger: AGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCC...GAGAGCCAGGCAGCCCCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CAA 90 bp GGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCACCTGCTGGCCTCCCTaGGTCCTTGCAAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GDSSKDLDRWRWMREAICTCWPP*VLASCG
Trigger: CCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGT...GCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GAGGGTGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGAAGGCCTGGGTCCGGTaGGCCACCACGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: EGVSPRSCGSSSVSGERGKAWVR*ATTALP
Trigger: GGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTT...CCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CCCTCTACCACATCCCAGTTAGAAAGTCTTGAGCCCTTGGACAGGCAGACATGGCGCAGGAAGCCAGGGTaGGGGCGGGCGATGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PSTTSQLESLEPLDRQTWRRKPG*GRAMGR
Trigger: CCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGCG...CCATGTCTGCCTGTCCAAGGGCTCAAGACTTTCTAACTGGGATGTGGTAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS TCA 90 bp TTTCCACAGCTCAGCACGGATCGCCTGCTCCATCTGCTCCTGTTCTaGGGACCTGGGAGCAGAGCCCCTCAGTCAAGGGGCCCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: FPQLSTDRLLHLLLF*GPGSRAPQSRGPFP
Trigger: GGGGAAAGGGCCCCTTGACTGAGGGGCTCTGCTCCCAGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGAGCTGTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529224.1
CDS-3UTR CAA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAGGGACTCTGGGATCCTaGCCCGAAGTCTGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTGTLGS*PEVCLV
Trigger: GACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCC...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCAGGGCTCGGGACTCTGGGATCCTaGCCCGAAGTCTGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: AGLSHHLPEPGRRGNAGLGTLGS*PEVCLV
Trigger: GACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCC...GAGCCCTGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CAA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGCTTGAAGATCCGGCTTaGCCCACCAGACGTCACGCT +
Preference number: 5 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRLEDPA*PTRRHA
Trigger: AGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAG...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CGGGTATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTGGCCTCCCTTGGTCCTaGCAAGCTGTGGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: RVWGGAERNVCGNRREGVGLPWS*QAVGRA
Trigger: AGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCC...AACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS GCA 90 bp CTCCTCACTCGGGGCCTTCTCTGTTGGCTCAGAACTGGCCTCTGCTaGATCATCATTGTCCCCTCCATCCTGCAGTCCCAGGACAGCCCC +
Preference number: 5 (lower is better)
Translates to: LLTRGLLCWLRTGLC*IIIVPSILQSQDSP
Trigger: GGGGCTGTCCTGGGACTGCAGGATGGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCGAGTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532600.1
ENST00000532881.5
CDS-3UTR CAA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCACCTGCTGGCCTCCCTaGGTCCTTGCAAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGTCWPP*VLASCG
Trigger: CCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGT...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CCTGGACCGGTGGAGGTGGATGAGGGAAGCGATCTGCCAGCCCTTCCAGCCTCCGAAACTAGGGTGCTGTaGCCCCCAAAGGTACCTTCA +
Preference number: 5 (lower is better)
Translates to: PGPVEVDEGSDLPALPASETRVL*PPKVPS
Trigger: TGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC...GGAGGCTGGAAGGGCTGGCAGATCGCTTCCCTCATCCACCTCCACCGGTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGGGATCCTGCCTGCCTTaGGGGGCCACTGGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRGSCLP*GATGCL
Trigger: CAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCC...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCGGATCCTGCCTGCCTTaGGGGGCCACTGGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: YGAELRGMCAATDVRVFLGSCLP*GATGCL
Trigger: CAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCC...GAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS GCA 90 bp CTCCTCCTCACTCGGGGCCTTCTCTGTTGGCTCAGAACTGGCCTCTaGTGCATCATCATTGTCCCCTCCATCCTGCAGTCCCAGGACAGC +
Preference number: 5 (lower is better)
Translates to: LLLTRGLLCWLRTGL*CIIIVPSILQSQDS
Trigger: GCTGTCCTGGGACTGCAGGATGGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCGAGTGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532600.1
ENST00000532881.5
CDS CCA 90 bp CTGCCACCCGGTACAAGGCCGCTGCCTAGAGCTGCCTCACATGCTTaGTGCAATACCTGGAGTGTGGCCCACATGGTCTGGATGGAGATG +
Preference number: 5 (lower is better)
Translates to: LPPGTRPLPRAASHA*CNTWSVAHMVWMEM
Trigger: CATCTCCATCCAGACCATGTGGGCCACACTCCAGGTATTGCACCAAGCATGTGAGGCAGCTCTAGGCAGCGGCCTTGTACCGGGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS CCA 90 bp CAGGCTGATGTGGGCAGAGGTACCAGGCCCACTGGCAATCGGACCTaGCAGCCCCTGGGCCTCGCTTTAGCTCTGAGTTTCAAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: QADVGRGTRPTGNRT*QPLGLALALSFKSD
Trigger: ATCTGACTTGAAACTCAGAGCTAAAGCGAGGCCCAGGGGCTGCCAGGTCCGATTGCCAGTGGGCCTGGTACCTCTGCCCACATCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531495.1
CDS-3UTR CAA 90 bp TCCTTCTCGTGTAGAAACTACCAGCAGGTAGCGGAGCCGGGGAGGCCGGGGTGCTCTGCTGCATCATCATaGTCCCCTCCATCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SFSCRNYQQVAEPGRPGCSAASS*SPPSCS
Trigger: ACTGCAGGATGGAGGGGACAATGATGATGCAGCAGA...GCACCCCGGCCTCCCCGGCTCCGCTACCTGCTGGTAGTTTCTACACGAGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532600.1
CDS-3UTR CAA 90 bp ACTGTCATGCACGCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGACTTGAAGATCCGGCTTaGCCCACCAGACGTCACGCT +
Preference number: 5 (lower is better)
Translates to: TVMHAGLSHHLPEPGRRGLEDPA*PTRRHA
Trigger: AGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAG...TCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CAA 90 bp CACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGTGGATGAGGTGGATGGAGATGGGCTaGAAGATCCGGCTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: HRRSGDSSKDLDRWRWMRWMEMG*KIRLCP
Trigger: TGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCA...CCTCATCCACCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGACAATAGCCGTCCACTCATaGAGGCAGCTCTGTTCGGAG +
Preference number: 5 (lower is better)
Translates to: SLAWCPVIWRGVTGGLGTIAVHS*RQLCSE
Trigger: CTCCGAACAGAGCTGCCTCAATGAGTGGACGGCTAT...TGTCCCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCACCTGCTGGCCTCCCTaGGTCCTTGCAAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: YGAELRGMCAATDVRVFLTCWPP*VLASCG
Trigger: CCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGT...GAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTAAGGCCTGGGTCCGGTaGGCCACCACGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLKAWVR*ATTALP
Trigger: GGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTT...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp ACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGGCCTGGCGGATCTCTTaGGAAGTGACACTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TISGLVPCDLAWCHRRSGAWRIS*EVTLSR
Trigger: CCTGGAGAGTGTCACTTCCAAAGAGATCCGCCAGGC...CCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GCGTGGTGTCACAGGAGGTCTGGGGACAGCAGCAAAGACCTGGACCGGTGGAGGAGCAGCAGCATCTGGTaGTCGATGAAGTCACGGTAC +
Preference number: 5 (lower is better)
Translates to: AWCHRRSGDSSKDLDRWRSSSIW*SMKSRY
Trigger: GTACCGTGACTTCATCGACAACCAGATGCTGCTGCT...CCTCCACCGGTCCAGGTCTTTGCTGCTGTCCCCAGACCTCCTGTGACACCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS TCA 90 bp GCAGCTGGGCCGACTCCTCATCCCAGAGGCGCACATTGTGGTAGGTaGAGCGCTCAGGGTAGAAGTTGTCAATCTCCCGGGCCATGTTCA +
Preference number: 5 (lower is better)
Translates to: AAGPTPHPRGAHCGR*SAQGRSCQSPGPCS
Trigger: TGAACATGGCCCGGGAGATTGACAACTTCTACCCTGAGCGCTTCACCTACCACAATGTGCGCCTCTGGGATGAGGAGTCGGCCCAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000529224.1
ENST00000531495.1
ENST00000532181.5
ENST00000532881.5
CDS GCA 90 bp GTGGCCCACATGGTCTGGATGGAGATGGGCTTGAAGATCCGGCTTTaGCCACCAGACGTCACGCTGAAGCCCCCGTCTCCATCTAAGTAC +
Preference number: 5 (lower is better)
Translates to: VAHMVWMEMGLKIRL*PPDVTLKPPSPSKY
Trigger: GTACTTAGATGGAGACGGGGGCTTCAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCAGACCATGTGGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS GCA 90 bp ACATCCAACACTTTCCACAGCTCAGCACGGATCGCCTGCTCCATCTaGTCCTGTTCTGAGGACCTGGGAGCAGAGCCCCTCAGTCAAGGG +
Preference number: 5 (lower is better)
Translates to: TSNTFHSSARIACSI*SCSEDLGAEPLSQG
Trigger: CCCTTGACTGAGGGGCTCTGCTCCCAGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGAGCTGTGGAAAGTGTTGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529224.1
CDS-3UTR CAA 90 bp GCAGACATGGGCCTGGGACTTAAGGCTGTAGGAGGTGAGGCTGTAGTGACAGGGCTTGAAGATCCGGCTTaGCCCACCAGACGTCACGCT +
Preference number: 5 (lower is better)
Translates to: ADMGLGLKAVGGEAVVTGLEDPA*PTRRHA
Trigger: AGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAG...CCCTGTCACTACAGCCTCACCTCCTACAGCCTTAAGTCCCAGGCCCATGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCTCAGGCCTGGATGGAGATGGGCTaGAAGATCCGGCTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: LWILFSVRGAWACVRAQAWMEMG*KIRLCP
Trigger: TGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCA...GGCCTGAGCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CAA 90 bp GCTGGCCTGTCTCACCACCTTCCGGAACCTGGGCGTAGAGGAAATGCAGGGCTCAGCTGCCTCACATGCTaGGTGCAATACCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: AGLSHHLPEPGRRGNAGLSCLTC*VQYLEC
Trigger: ACACTCCAGGTATTGCACCAAGCATGTGAGGCAGCT...GAGCCCTGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CAA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAGGCCTCCCTTGGTCCTaGCAAGCTGTGGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRGLPWS*QAVGRA
Trigger: AGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCC...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GAGGGTGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGGCAGCTCCTCCAGGTTaGCTGCGTTCCACTCTGAGC +
Preference number: 5 (lower is better)
Translates to: EGVSPRSCGSSSVSGERGAAPPG*LRSTLS
Trigger: GCTCAGAGTGGAACGCAGCAAACCTGGAGGAGCTGC...CCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS GCA 90 bp GAGGACCACATGGTCTGGATGGAGATGGGCTTGAAGATCCGGCTTTaGCCACCAGACGTCACGCTGAAGCCCCCGTCTCCATCTAAGTAC +
Preference number: 5 (lower is better)
Translates to: EDHMVWMEMGLKIRL*PPDVTLKPPSPSKY
Trigger: GTACTTAGATGGAGACGGGGGCTTCAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCAGACCATGTGGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532181.5
CDS-3UTR CAA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTCTTGAAGATCCGGCTTaGCCCACCAGACGTCACGCT +
Preference number: 5 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSLEDPA*PTRRHA
Trigger: AGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAG...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TATGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCGCCTGGCGGATCTCTTaGGAAGTGACACTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: YGAELRGMCAATDVRVFLAWRIS*EVTLSR
Trigger: CCTGGAGAGTGTCACTTCCAAAGAGATCCGCCAGGC...GAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCGGCTGACGCCCATCTaGCAGTGGACCAGCACGTGG +
Preference number: 5 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLRLTPI*QWTSTW
Trigger: CCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCG...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp AAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTTGGATGGAGATGGGCTaGAAGATCCGGCTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: KTISGLVPCDLAWCHRRSWMEMG*KIRLCP
Trigger: TGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCA...AGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp AGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTATAGCCGTCCACTCATaGAGGCAGCTCTGTTCGGAG +
Preference number: 5 (lower is better)
Translates to: RRLSLAWCPVIWRGVTGGIAVHS*RQLCSE
Trigger: CTCCGAACAGAGCTGCCTCAATGAGTGGACGGCTAT...ACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CCTCCCTTGGTCCTTGCAAGCTGTGGGAAGGGCTGCAGAGGCTCTTCATGTGAAATAGCCGTCCACTCATaGAGGCAGCTCTGTTCGGAG +
Preference number: 5 (lower is better)
Translates to: PPLVLASCGKGCRGSSCEIAVHS*RQLCSE
Trigger: CTCCGAACAGAGCTGCCTCAATGAGTGGACGGCTAT...TTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532881.5
CDS-3UTR CAA 90 bp CAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTGTGAGGGCGAAACTAGGGTGCTGTaGCCCCCAAAGGTACCTTCA +
Preference number: 5 (lower is better)
Translates to: QGVVDPLQCQGSVGMCEGETRVL*PPKVPS
Trigger: TGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC...GCCCTCACACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTAGGATCCTGCCTGCCTTaGGGGGCCACTGGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: VENETRVLLPPKVPSVPLGSCLP*GATGCL
Trigger: CAGGCAACCAGTGGCCCCCAAAGGCAGGCAGGATCC...TAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTTCGGGGCCTTCTCTGTaGGCTCAGAACTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: AGLELRMKLGCCCPQRYLSGPSL*AQNWPL
Trigger: CAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCGA...AAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GAGGGTGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGAGCTGCCTCACATGCTaGGTGCAATACCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: EGVSPRSCGSSSVSGERGSCLTC*VQYLEC
Trigger: ACACTCCAGGTATTGCACCAAGCATGTGAGGCAGCT...CCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGTTAGAATAGCCGTCCACTCATaGAGGCAGCTCTGTTCGGAG +
Preference number: 5 (lower is better)
Translates to: GCCCPQRYLQSLYHIPVRIAVHS*RQLCSE
Trigger: CTCCGAACAGAGCTGCCTCAATGAGTGGACGGCTAT...TCTAACTGGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACGGCCTCCCTTGGTCCTaGCAAGCTGTGGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYGLPWS*QAVGRA
Trigger: AGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCC...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp ACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGTCTGGGTGTTTCTCCAAGGAGTaGTGGATCCTCTTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: TISGLVPCDLAWCHRRSGCFSKE*WILFSV
Trigger: GACACTGAAGAGGATCCACAACTCCTTGGAGAAACA...CCCAGACCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp AAGAAGACTATCTCTGGCCTGGTGCCCTGTGATCTGGCGTGGTGTCACAGGAGGGAAACTAGGGTGCTGTaGCCCCCAAAGGTACCTTCA +
Preference number: 5 (lower is better)
Translates to: KKTISGLVPCDLAWCHRRETRVL*PPKVPS
Trigger: TGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC...CCTCCTGTGACACCACGCCAGATCACAGGGCACCAGGCCAGAGATAGTCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGCCTGGCGGATCTCTTaGGAAGTGACACTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQAWRIS*EVTLSR
Trigger: CCTGGAGAGTGTCACTTCCAAAGAGATCCGCCAGGC...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTGGATGGAGATGGGCTaGAAGATCCGGCTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: ECAGLELRMKLGCCCPQRWMEMG*KIRLCP
Trigger: TGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCA...CCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TGGGGCGGAGCTGAGAGGAATGTGTGCGGCAACAGACGTGAGGGTGTTTCTCCATGTTTCTCCAAGGAGTaGTGGATCCTCTTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: WGGAERNVCGNRREGVSPCFSKE*WILFSV
Trigger: GACACTGAAGAGGATCCACAACTCCTTGGAGAAACA...TGGAGAAACACCCTCACGTCTGTTGCCGCACACATTCCTCTCAGCTCCGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp GAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACCACATCCCAGCAGCAGCATCTGGTaGTCGATGAAGTCACGGTAC +
Preference number: 5 (lower is better)
Translates to: ETRVLLPPKVPSVPLPHPSSSIW*SMKSRY
Trigger: GTACCGTGACTTCATCGACAACCAGATGCTGCTGCT...GGGATGTGGTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CCCTTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGTCTGCTGCATCATCATaGTCCCCTCCATCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PFLHGKLCFHSVPQVSVQSAASS*SPPSCS
Trigger: ACTGCAGGATGGAGGGGACAATGATGATGCAGCAGA...CTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp CGTGCCACAGGTGAGTGTGCAGGGCTAGAGTTGAGAATGAAACTAGGGTGCTGTTCTGCTGCATCATCATaGTCCCCTCCATCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RATGECAGLELRMKLGCCSAASS*SPPSCS
Trigger: ACTGCAGGATGGAGGGGACAATGATGATGCAGCAGA...ACAGCACCCTAGTTTCATTCTCAACTCTAGCCCTGCACACTCACCTGTGGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TGTTTCTCCAAGGAGTTGTGGATCCTCTTCAGTGTCAGGGGAGCGTGGGCATGTTCTGCTGCATCATCATaGTCCCCTCCATCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: CFSKELWILFSVRGAWACSAASS*SPPSCS
Trigger: ACTGCAGGATGGAGGGGACAATGATGATGCAGCAGA...ACATGCCCACGCTCCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TTTTTGCACGGGAAGCTCTGTTTTCATTCCGTGCCACAGGTGAGTGTGCAGGGCAGCTGCCTCACATGCTaGGTGCAATACCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: FLHGKLCFHSVPQVSVQGSCLTC*VQYLEC
Trigger: ACACTCCAGGTATTGCACCAAGCATGTGAGGCAGCT...GCCCTGCACACTCACCTGTGGCACGGAATGAAAACAGAGCTTCCCGTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS-3UTR CAA 90 bp TTGAGAATGAAACTAGGGTGCTGTTGCCCCCAAAGGTACCTTCAGTCCCTCTACGAAACTAGGGTGCTGTaGCCCCCAAAGGTACCTTCA +
Preference number: 5 (lower is better)
Translates to: LRMKLGCCCPQRYLQSLYETRVL*PPKVPS
Trigger: TGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTC...GTAGAGGGACTGAAGGTACCTTTGGGGGCAACAGCACCCTAGTTTCATTCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS CCA 72 bp ACCAGGGCCATGGAGCCAGGCCGCGAGCACCTGGGCTaGCACCGGGCACGGCCCCTTCCCTCAACCCCGCGG +
Preference number: 6 (lower is better)
Translates to: TRAMEPGREHLG*HRARPLPSTPR
Trigger: CCGCGGGGTTGAGGGAAGGGGCCGTGCCCGGTGCCAGCCCAGGTGCTCGCGGCCTGGCTCCATGGCCCTGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532600.1
CDS CCA 72 bp TCGGGGCCTCCGCAGCCCGGGCGGCGCGCAGGGCTCTaGATTGTGCCCCGGCGCCAGTACCAGAGACCCTCG +
Preference number: 6 (lower is better)
Translates to: SGPPQPGRRAGL*IVPRRQYQRPS
Trigger: CGAGGGTCTCTGGTACTGGCGCCGGGGCACAATCCAGAGCCCTGCGCGCCGCCCGGGCTGCGGAGGCCCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534112.1
CDS CCA 72 bp GGGCACGGCCCCTTCCCTCAACCCCGCGGACAGTCCTaGACCCGCAGGACCAGGAAGGACGGACGGCGCCAC +
Preference number: 6 (lower is better)
Translates to: GHGPFPQPRGQS*TRRTRKDGRRH
Trigger: GTGGCGCCGTCCGTCCTTCCTGGTCCTGCGGGTCCAGGACTGTCCGCGGGGTTGAGGGAAGGGGCCGTGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308298.11
ENST00000376757.9
CDS CCA 72 bp CCTGGTAGATCTGCAGCTGGCGCAGGAAGCCAGGGTTaGGGCGGGCGATGGGCCGGAGCTCCTGCACGTGGC +
Preference number: 6 (lower is better)
Translates to: PGRSAAGAGSQG*GGRWAGAPARG
Trigger: GCCACGTGCAGGAGCTCCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGCGCCAGCTGCAGATCTACCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000531495.1
ENST00000532881.5
CDS CAA 72 bp GCCAGCACTGTGGCCGCTGAGCGGCTGACGCCCATCTaGCAGTGGACCAGCACGTGGGTGCCCTGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: ASTVAAERLTPI*QWTSTWVPCAL
Trigger: CAGAGCACAGGGCACCCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527821.2
CDS CAA 90 bp ATGCGGGAGGCTCGGTCCCGCTGTGCCACCAGCAGCAGCATCTGGTaGTCGATGAAGTCACGGTACTGCTGGAGGGGGAGCCCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: MREARSRCATSSSIW*SMKSRYCWRGSPRR
Trigger: GCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCATCGACAACCAGATGCTGCTGCTGGTGGCACAGCGGGACCGAGCCTCCCGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000529224.1
ENST00000532181.5
ENST00000532881.5
CDS CAA 72 bp GCCAGCACTGTGGCCGCTGAGCGGCTGACGCCCATCTaGCAGTGGACCAGCACGTGGGTGCCCTGTGCTCTT +
Preference number: 6 (lower is better)
Translates to: ASTVAAERLTPI*QWTSTWVPCAL
Trigger: AAGAGCACAGGGCACCCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000531495.1
ENST00000532881.5
CDS TCA 72 bp CCCGCTGTGCCACCAGCAGCAGCATCTGGTTGTCGATaGAGTCACGGTACTGCTGGAGGGGGAGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PAVPPAAASGCR*SHGTAGGGAPG
Trigger: GCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCATCGACAACCAGATGCTGCTGCTGGTGGCACAGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000529224.1
ENST00000532181.5
ENST00000532881.5
CDS TCA 72 bp TCATGGCATAGGCCAGCACTGTGGCCGCTGAGCGGCTaGCGCCCATCTTGCAGTGGACCAGCACGTGGGTGC +
Preference number: 6 (lower is better)
Translates to: SWHRPALWPLSG*RPSCSGPARGC
Trigger: GCACCCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTGGCCTATGCCATGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000531495.1
ENST00000532881.5
CDS CCA 72 bp GAGCGGCTGACGCCCATCTTGCAGTGGACCAGCACGTaGGTGCCCTGTGCTCTGTTCCTCTGCAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ERLTPILQWTST*VPCALFLCSSS
Trigger: GGAGGAGCTGCAGAGGAACAGAGCACAGGGCACCCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527821.2
CDS TCA 72 bp CTCAGCACGGATCGCCTGCTCCATCTGCTCCTGTTCTaGGGACCTGGGAGCAGAGCCCCTCAGTCAAGGGGC +
Preference number: 6 (lower is better)
Translates to: LSTDRLLHLLLF*GPGSRAPQSRG
Trigger: GCCCCTTGACTGAGGGGCTCTGCTCCCAGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529224.1
CDS GCA 72 bp ACTTTCCACAGCTCAGCACGGATCGCCTGCTCCATCTaGTCCTGTTCTGAGGACCCGCCAGGCTCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: TFHSSARIACSI*SCSEDPPGSAL
Trigger: CAGCGCCGAGCCTGGCGGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGAGCTGTGGAAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000527821.2
ENST00000532881.5
CDS GCA 72 bp AGCAGCAGCATCTGGTTGTCGATGAAGTCACGGTACTaGTGGAGGGGGAGCCCCAGGCGCAGCTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SSSIWLSMKSRY*WRGSPRRSSRA
Trigger: GGCTCTGGAGCTGCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCATCGACAACCAGATGCTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000529224.1
ENST00000532181.5
ENST00000532881.5
CDS GCA 72 bp GAGGTGGGGGAAGATGCGGGAGGCTCGGTCCCGCTGTaGCACCAGCAGCAGCATCTGGTTGTCGATGAAGTC +
Preference number: 6 (lower is better)
Translates to: EVGEDAGGSVPL*HQQQHLVVDEV
Trigger: GACTTCATCGACAACCAGATGCTGCTGCTGGTGGCACAGCGGGACCGAGCCTCCCGCATCTTCCCCCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000529224.1
ENST00000532181.5
ENST00000532881.5
CDS GCA 72 bp GGAGCTCCTGCACGTGGCGCAGGGCCTGCTCCAGGCTaGATTCGTACTGCTTCATGGCATAGGCCAGCACTG +
Preference number: 6 (lower is better)
Translates to: GAPARGAGPAPG*IRTASWHRPAL
Trigger: CAGTGCTGGCCTATGCCATGAAGCAGTACGAATGCAGCCTGGAGCAGGCCCTGCGCCACGTGCAGGAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000531495.1
ENST00000532881.5
CDS CCA 72 bp ATGAAGCGGTGCGTCTCCTTCCAGTGCGGCAGCAGCTaGGCCGACTCCTCATCCCAGAGGCGCACATTGTGG +
Preference number: 6 (lower is better)
Translates to: MKRCVSFQCGSS*ADSSSQRRTLW
Trigger: CCACAATGTGCGCCTCTGGGATGAGGAGTCGGCCCAGCTGCTGCCGCACTGGAAGGAGACGCACCGCTTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000531495.1
ENST00000532181.5
ENST00000532881.5
CDS CCA 72 bp GTGGGCAGAGGTACCAGGCCCACTGGCAATCGGACCTaGCAGCCCCTGGGCCTCGCTTTAGCTCTGAGTTTC +
Preference number: 6 (lower is better)
Translates to: VGRGTRPTGNRT*QPLGLALALSF
Trigger: GAAACTCAGAGCTAAAGCGAGGCCCAGGGGCTGCCAGGTCCGATTGCCAGTGGGCCTGGTACCTCTGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531495.1
CDS TCA 72 bp GTACTGCTTCATGGCATAGGCCAGCACTGTGGCCGCTaGGCGGCTGACGCCCATCTTGCAGTGGACCAGCAC +
Preference number: 6 (lower is better)
Translates to: VLLHGIGQHCGR*AADAHLAVDQH
Trigger: GTGCTGGTCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTGGCCTATGCCATGAAGCAGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000527821.2
ENST00000531495.1
ENST00000532881.5
CDS CCA 72 bp GTCACGCTGAAGCCCCCGTCTCCATCTAAGTACACCTaGGTGTCACTCCAGAGGGGCAAGACCAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: VTLKPPSPSKYT*VSLQRGKTRPR
Trigger: CCTGGGCCTGGTCTTGCCCCTCTGGAGTGACACCCAGGTGTACTTAGATGGAGACGGGGGCTTCAGCGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532881.5
CDS GCA 72 bp ACTTTCCACAGCTCAGCACGGATCGCCTGCTCCATCTaGTCCTGTTCTGAGGACCTGGGAGCAGAGCCCCTC +
Preference number: 6 (lower is better)
Translates to: TFHSSARIACSI*SCSEDLGAEPL
Trigger: GAGGGGCTCTGCTCCCAGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGAGCTGTGGAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529224.1
CDS CAA 72 bp CATGGTCTGGATGGAGATGGGCTTGAAGATCCGGCTTaGCCCACCAGACGTCACGCTGAAGCCCCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: HGLDGDGLEDPA*PTRRHAEAPVS
Trigger: GGAGACGGGGGCTTCAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCAGACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532881.5
CDS GCA 72 bp CGGGGCCTTCTCTGTTGGCTCAGAACTGGCCTCTGCTaGATCATCATTGTCCCCTCCATCCTGCAGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RGLLCWLRTGLC*IIIVPSILQSQ
Trigger: CTGGGACTGCAGGATGGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532600.1
ENST00000532881.5
CDS GCA 72 bp ATGGTCTGGATGGAGATGGGCTTGAAGATCCGGCTTTaGCCACCAGACGTCACGCTGAAGCCCCCGTCTCCA +
Preference number: 6 (lower is better)
Translates to: MVWMEMGLKIRL*PPDVTLKPPSP
Trigger: TGGAGACGGGGGCTTCAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCAGACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532881.5
CDS CCA 72 bp GGTACAAGGCCGCTGCCTAGAGCTGCCTCACATGCTTaGTGCAATACCTGGAGTGTGGCCCACATGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GTRPLPRAASHA*CNTWSVAHMVW
Trigger: CCAGACCATGTGGGCCACACTCCAGGTATTGCACCAAGCATGTGAGGCAGCTCTAGGCAGCGGCCTTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS CAA 72 bp CCCCGTGGAGCTCCTCCTCACTCGGGGCCTTCTCTGTaGGCTCAGAACTGGCCTCTGCTGCATCATCATTGT +
Preference number: 6 (lower is better)
Translates to: PRGAPPHSGPSL*AQNWPLLHHHC
Trigger: ACAATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCGAGTGAGGAGGAGCTCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532600.1
ENST00000532881.5
CDS TCA 72 bp CCGACTCCTCATCCCAGAGGCGCACATTGTGGTAGGTaGAGCGCTCAGGGTAGAAGTTGTCAATCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: PTPHPRGAHCGR*SAQGRSCQSPG
Trigger: CCCGGGAGATTGACAACTTCTACCCTGAGCGCTTCACCTACCACAATGTGCGCCTCTGGGATGAGGAGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000376757.9
ENST00000529224.1
ENST00000531495.1
ENST00000532181.5
ENST00000532881.5
CDS GCA 72 bp ACTCGGGGCCTTCTCTGTTGGCTCAGAACTGGCCTCTaGTGCATCATCATTGTCCCCTCCATCCTGCAGTCC +
Preference number: 6 (lower is better)
Translates to: TRGLLCWLRTGL*CIIIVPSILQS
Trigger: GGACTGCAGGATGGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532600.1
ENST00000532881.5
CDS GCA 72 bp ACAAGGCCGCTGCCTAGAGCTGCCTCACATGCTTGGTaGAATACCTGGAGTGTGGCCCACATGGTCTGGATG +
Preference number: 6 (lower is better)
Translates to: TRPLPRAASHAW*NTWSVAHMVWM
Trigger: CATCCAGACCATGTGGGCCACACTCCAGGTATTGCACCAAGCATGTGAGGCAGCTCTAGGCAGCGGCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532881.5
CDS CAA 72 bp TCTGTTGGCTCAGAACTGGCCTCTGCTGCATCATCATaGTCCCCTCCATCCTGCAGTCCCAGGACAGCCCCA +
Preference number: 6 (lower is better)
Translates to: SVGSELASAASS*SPPSCSPRTAP
Trigger: TGGGGCTGTCCTGGGACTGCAGGATGGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308127.9
ENST00000308298.11
ENST00000376757.9
ENST00000532181.5
ENST00000532600.1
ENST00000532881.5
ENST00000534112.1
CDS GCA 72 bp ACTTTCCACAGCTCAGCACGGATCGCCTGCTCCATCTaGTCCTGTTCTGAGGACCACATGGTCTGGATGGAG +
Preference number: 6 (lower is better)
Translates to: TFHSSARIACSI*SCSEDHMVWME
Trigger: CTCCATCCAGACCATGTGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGAGCTGTGGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532181.5
CDS TCA 72 bp GTGGGAAGAGAAGACCTCTGGCATGTCACTGGTCTCTaGGGTGCTCTCCAGATCCAACACTTTCCACAGCTC +
Preference number: 6 (lower is better)
Translates to: VGREDLWHVTGL*GALQIQHFPQL
Trigger: GAGCTGTGGAAAGTGTTGGATCTGGAGAGCACCTCAGAGACCAGTGACATGCCAGAGGTCTTCTCTTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308298.11