RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SSH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141298

Ensembl transcript IDs: ENST00000269033.7, ENST00000324677.12, ENST00000394848.5, ENST00000540801.6, ENST00000577483.1, ENST00000577991.1, ENST00000578411.1, ENST00000579040.5, ENST00000579954.1, ENST00000582084.1, ENST00000590153.1, ENST00000592397.1, ENST00000649863.1

Found 999 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCAAGATGCCCATCTGTGTGGATCCCACCAACCCAGCAGTTTCTaGGCAGCAGCCTCTCCACCCCCAACTTTATGTCTTCCTCCTCTT +
Preference number: 1 (lower is better)
Translates to: SQDAHLCGSHQPSSF*AAASPPPTLCLPPL
Trigger: AAGAGGAGGAAGACATAAAGTTGGGGGTGGAGAGGCTGCTGCCCAGAAACTGCTGGGTTGGTGGGATCCACACAGATGGGCATCTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 90 bp ATCTGTCTGGGGCCTGTGAGCAGAGTACCTCAGAGCCTGAGGCACTaGGATCTTCAGGCTGTCCTTGGAGCTCTGGGTAGTTTGCAAAAT +
Preference number: 1 (lower is better)
Translates to: ICLGPVSRVPQSLRH*DLQAVLGALGSLQN
Trigger: ATTTTGCAAACTACCCAGAGCTCCAAGGACAGCCTGAAGATCTCAGTGCCTCAGGCTCTGAGGTACTCTGCTCACAGGCCCCAGACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR GCA 90 bp CACTGCACCATAGAGACGCTTTTAGCAAGTGGTTTCTGTCCAACCTaGTTCCTGGCAGGGATGTCAGACCCAGCCTTGGCTTCCACACAA +
Preference number: 1 (lower is better)
Translates to: HCTIETLLASGFCPT*FLAGMSDPALASTQ
Trigger: TTGTGTGGAAGCCAAGGCTGGGTCTGACATCCCTGCCAGGAAGCAGGTTGGACAGAAACCACTTGCTAAAAGCGTCTCTATGGTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp CCCTCTCCCCACCCTGCCATAAGTTCCTGCCCTTCCCCATCATATTaGTGGTGGAACTGCTTCAAGAAGGCAGGGTATTCTACATGGAAG +
Preference number: 1 (lower is better)
Translates to: PSPHPAISSCPSPSY*WWNCFKKAGYSTWK
Trigger: CTTCCATGTAGAATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATATGATGGGGAAGGGCAGGAACTTATGGCAGGGTGGGGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 90 bp GCCCTGCCATCTGCCCCCACCAAACTCTGGCCTCTGACATCATGCTaGCAGTCTGTGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCA +
Preference number: 1 (lower is better)
Translates to: ALPSAPTKLWPLTSC*QSVHLYFPQCCDKP
Trigger: TGGCTTATCACAGCACTGAGGAAAATACAAATGCACAGACTGTCAGCATGATGTCAGAGGCCAGAGTTTGGTGGGGGCAGATGGCAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp CCCCACCCTGCCATAAGTTCCTGCCCTTCCCCATCATATTGGTGGTaGAACTGCTTCAAGAAGGCAGGGTATTCTACATGGAAGAGCTCT +
Preference number: 1 (lower is better)
Translates to: PHPAISSCPSPSYWW*NCFKKAGYSTWKSS
Trigger: AGAGCTCTTCCATGTAGAATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATATGATGGGGAAGGGCAGGAACTTATGGCAGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp TCTCCCCACCCTGCCATAAGTTCCTGCCCTTCCCCATCATATTGGTaGTGGAACTGCTTCAAGAAGGCAGGGTATTCTACATGGAAGAGC +
Preference number: 1 (lower is better)
Translates to: SPHPAISSCPSPSYW*WNCFKKAGYSTWKS
Trigger: GCTCTTCCATGTAGAATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATATGATGGGGAAGGGCAGGAACTTATGGCAGGGTGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp AGGGAACAGTCCAAAACTTTGGTCCTGCTTGTACCTCTTAGTGTGTaGGATGTCATCATCGTAAGGGGTTACCACAAGTGGATGCCACTC +
Preference number: 1 (lower is better)
Translates to: REQSKTLVLLVPLSV*DVIIVRGYHKWMPL
Trigger: GAGTGGCATCCACTTGTGGTAACCCCTTACGATGATGACATCCCACACACTAAGAGGTACAAGCAGGACCAAAGTTTTGGACTGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 90 bp GGAGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTaGGATACTGGCAAACAATGTTCTGGGATTTCAGTCTCACAGAGA +
Preference number: 1 (lower is better)
Translates to: GASTLGNSHILPGCG*DTGKQCSGISVSQR
Trigger: TCTCTGTGAGACTGAAATCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 90 bp TCCCTGTCAACCCACATTGCCTGCACAGATACAGGTTTGAATATGTaGACTCTGTTATCCGTCGATACACTGAACCCACCATCACCATCC +
Preference number: 1 (lower is better)
Translates to: SLSTHIACTDTGLNM*TLLSVDTLNPPSPS
Trigger: GGATGGTGATGGTGGGTTCAGTGTATCGACGGATAACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
3UTR CCA 90 bp TTTGCAGAGCCGGCCATTATCATGTCTTACTGTAACGATACACTCTaGAACACCGGAAGACCCTCTTTTAAAGCAAAGCGGAACCTGCCT +
Preference number: 1 (lower is better)
Translates to: FAEPAIIMSYCNDTL*NTGRPSFKAKRNLP
Trigger: AGGCAGGTTCCGCTTTGCTTTAAAAGAGGGTCTTCCGGTGTTCCAGAGTGTATCGTTACAGTAAGACATGATAATGGCCGGCTCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp GCCTCTACTAGGAGCTTCCACTCTGGGCAACTCACATATACTTCCTaGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATTTCAGT +
Preference number: 1 (lower is better)
Translates to: ASTRSFHSGQLTYTS*LWLRYWQTMFWDFS
Trigger: ACTGAAATCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCTCCTAGTAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR GCA 90 bp CTGTTTTCTGTAAGAAGCTACAAGAGGCTTGTTTATGACAGGCGCTaGTGCGTTAAGGATCTCCACAACAGTAGCAAAACGACAGCATCC +
Preference number: 1 (lower is better)
Translates to: LFSVRSYKRLVYDRR*CVKDLHNSSKTTAS
Trigger: GGATGCTGTCGTTTTGCTACTGTTGTGGAGATCCTTAACGCAGCAGCGCCTGTCATAAACAAGCCTCTTGTAGCTTCTTACAGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp ACTAGGAGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTaGTTGAGATACTGGCAAACAATGTTCTGGGATTTCAGTCTCACA +
Preference number: 1 (lower is better)
Translates to: TRSFHSGQLTYTSWL*LRYWQTMFWDFSLT
Trigger: TGTGAGACTGAAATCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCTCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp CACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTaGCAAACAATGTTCTGGGATTTCAGTCTCACAGAGAAATCAGCT +
Preference number: 1 (lower is better)
Translates to: HSGQLTYTSWLWLRY*QTMFWDFSLTEKSA
Trigger: AGCTGATTTCTCTGTGAGACTGAAATCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 90 bp CACAAAACTGAGTGGATGAGATACTTGAACATTCAAGGAGACTACTaGGCAACAGCACAGGGTACACATAATCACTGCACCATAGAGACG +
Preference number: 1 (lower is better)
Translates to: HKTEWMRYLNIQGDY*ATAQGTHNHCTIET
Trigger: CGTCTCTATGGTGCAGTGATTATGTGTACCCTGTGCTGTTGCTCAGTAGTCTCCTTGAATGTTCAAGTATCTCATCCACTCAGTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp ACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTaGGATTTCAGTCTCACAGAGAAATCAGCTTTCAGTCACGCTGTG +
Preference number: 1 (lower is better)
Translates to: TYTSWLWLRYWQTMF*DFSLTEKSAFSHAV
Trigger: CACAGCGTGACTGAAAGCTGATTTCTCTGTGAGACTGAAATCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR GCA 90 bp AGGAATTCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTaGTTGAATATTTCCAGCAATGTGCACTCACTATTTTGCAAGGCA +
Preference number: 1 (lower is better)
Translates to: RNSLYHLPGKMFSSL*LNISSNVHSLFCKA
Trigger: TGCCTTGCAAAATAGTGAGTGCACATTGCTGGAAATATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579954.1
3UTR TCA 90 bp CGTGGACATCAACGAAAGCAAATCTGCAAGCCTCTTCAGTTTCAATaGGATGCAGAGGTGTTTCATGCTAGACTAAATCTGTTTTCTGTA +
Preference number: 1 (lower is better)
Translates to: RGHQRKQICKPLQFQ*DAEVFHARLNLFSV
Trigger: TACAGAAAACAGATTTAGTCTAGCATGAAACACCTCTGCATCTCATTGAAACTGAAGAGGCTTGCAGATTTGCTTTCGTTGATGTCCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 90 bp CTCACAAAAACATTTTTACCAAACATGCCTAGATCACTTCAGAACTaGAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTAC +
Preference number: 1 (lower is better)
Translates to: LTKTFLPNMPRSLQN*NPQMKQVNTSVTCY
Trigger: GTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTTCAGTTCTGAAGTGATCTAGGCATGTTTGGTAAAAATGTTTTTGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp AATAGAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTaGCAAATCACTCTCCAGAAAGGCTGCTCCAGTTCATTCTTCCAC +
Preference number: 1 (lower is better)
Translates to: NRVTRTKIMQNDKAY*QITLQKGCSSSFFH
Trigger: GTGGAAGAATGAACTGGAGCAGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
3UTR CCA 90 bp CTGAGGAAAAAGTTACTAATGCATAATTTGGCAGGAGCTGGTGATTaGAAGTCTCCATTTAAACAACTACAGCCACCATCAACATATTGT +
Preference number: 1 (lower is better)
Translates to: LRKKLLMHNLAGAGD*KSPFKQLQPPSTYC
Trigger: ACAATATGTTGATGGTGGCTGTAGTTGTTTAAATGGAGACTTCCAATCACCAGCTCCTGCCAAATTATGCATTAGTAACTTTTTCCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 90 bp CAACATATTGTACAGATTCCTATCAACACCCAACACTTTCATTTCTaGTGTCTGTGTTTTCCAGTTGCAACTCTACTCCTTCTTAAAAAG +
Preference number: 1 (lower is better)
Translates to: QHIVQIPINTQHFHF*CLCFPVATLLLLKK
Trigger: CTTTTTAAGAAGGAGTAGAGTTGCAACTGGAAAACACAGACACCAGAAATGAAAGTGTTGGGTGTTGATAGGAATCTGTACAATATGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGAGCCCTCTGACTTCTaGCTGACCTTTAGCCCATTC +
Preference number: 2 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAEPSDF*LTFSPF
Trigger: GAATGGGCTAAAGGTCAGCCAGAAGTCAGAGGGCTC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCAGTTGGGAGGACACTaGAGAGCACATTTTTCTGGC +
Preference number: 2 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAQLGGH*RAHFSG
Trigger: GCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CAA 90 bp ACCCTCTCCCCACCCTGCCATAAGTTCCTGCCCTTCCCCATCATATaGGTGGTGGAACTGCTTCAAGAAGGCAGGGTATTCTACATGGAA +
Preference number: 2 (lower is better)
Translates to: TLSPPCHKFLPFPII*VVELLQEGRVFYME
Trigger: TTCCATGTAGAATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATATGATGGGGAAGGGCAGGAACTTATGGCAGGGTGGGGAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGTGGGCACTTGCCCCTaGCTGAGGCCTCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: CICIFLSAVISQKPVSSLVGTCP*LRPPLW
Trigger: CCACAGGGGAGGCCTCAGCCAGGGGCAAGTGCCCAC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGAGCCCTCTGACTTCTaGCTGACCTTTAGCCCATTC +
Preference number: 2 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWEPSDF*LTFSPF
Trigger: GAATGGGCTAAAGGTCAGCCAGAAGTCAGAGGGCTC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAACCCAGCAGTTTCTaGGCAGCAGCCTCTCCACCC +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQPSSF*AAASPP
Trigger: GGGTGGAGAGGCTGCTGCCCAGAAACTGCTGGGTTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTCCCCATCATATTGGTaGTGGAACTGCTTCAAGAAG +
Preference number: 2 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTASPSYW*WNCFKK
Trigger: CTTCTTGAAGCAGTTCCACCACCAATATGATGGGGA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCCAAAACTTTGGTCCTaGTTGTACCTCTTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAPKLWS*LYLLVC
Trigger: ACACACTAAGAGGTACAAGCAGGACCAAAGTTTTGG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCAAGCCTCCTCACATTaGTTCATACCACCTAACAAA +
Preference number: 2 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAQASSH*FIPPNK
Trigger: TTTGTTAGGTGGTATGAACCAATGTGAGGAGGCTTG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACGGCTGGATGAAGGCTaGGAGCCCTCTGACTTCTGG +
Preference number: 2 (lower is better)
Translates to: CICIFLSAVISQKPVSSLRLDEG*EPSDFW
Trigger: CCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAGAGCCTGAGGCACTaGGATCTTCAGGCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQSLRH*DLQAVL
Trigger: AAGGACAGCCTGAAGATCTCAGTGCCTCAGGCTCTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGGTACACATAATCACTaGACCATAGAGACGCTTTTA +
Preference number: 2 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAGTHNH*TIETLL
Trigger: TAAAAGCGTCTCTATGGTGCAGTGATTATGTGTACC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTCGATGCCTCAGGTCTaGAAACCAAACCATCATCAC +
Preference number: 2 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWSMPQV*KPNHHH
Trigger: GTGATGATGGTTTGGTTTCCAGACCTGAGGCATCGA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCACTGCGCACCTCCCCTaGACACTGCTCAGCTATGTA +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSTAHLP*TLLSYV
Trigger: TACATAGCTGAGCAGTGTCCAGGGGAGGTGCGCAGT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CAA 90 bp ACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTCCTaGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCAGCTATGT +
Preference number: 2 (lower is better)
Translates to: TGDYKSLKRRQSGKS*TVHCAPPLDTAQLC
Trigger: ACATAGCTGAGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCCAAACTCTGGCCTCTaGCATCATGCTGACAGTCTG +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSPNSGL*HHADSL
Trigger: CAGACTGTCAGCATGATGTCAGAGGCCAGAGTTTGG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTACAAACTCCTTGGCATaGTTGAATGACAGATATTCT +
Preference number: 2 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTATNSLA*LNDRYS
Trigger: AGAATATCTGTCATTCAACCATGCCAAGGAGTTTGT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGAAGCAGGTGGCAGCTaGCTGAAAAACAGCAATTTG +
Preference number: 2 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIEAGGS*LKNSNL
Trigger: CAAATTGCTGTTTTTCAGTCAGCTGCCACCTGCTTC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACAGTTGGGAGGACACTaGAGAGCACATTTTTCTGGC +
Preference number: 2 (lower is better)
Translates to: THIYFLAVVEILANNVLGQLGGH*RAHFSG
Trigger: GCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CAA 90 bp AAGGCTGCTCCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTaGTTCCTTGAATCCCTGTCAACCCACATTGCCTGCACAGATACA +
Preference number: 2 (lower is better)
Translates to: KAAPVHSSTNSTSQC*FLESLSTHIACTDT
Trigger: TGTATCTGTGCAGGCAATGTGGGTTGACAGGGATTCAAGGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGGAGCAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
3UTR-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGAAGCAGGTGGCAGCTaGCTGAAAAACAGCAATTTG +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSEAGGS*LKNSNL
Trigger: CAAATTGCTGTTTTTCAGTCAGCTGCCACCTGCTTC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAAGTCTGGAAAGTCCTTaGCAGTTCACTGCGCACCTC +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGSLESP*QFTAHL
Trigger: GAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGGTTTCCCTTTCTACTaGCCAGGTTCAGCTCAAGTT +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSGFPFY*PGSAQV
Trigger: AACTTGAGCTGAACCTGGTCAGTAGAAAGGGAAACC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGAATGATAAACGGTCTTaGCATCCAGATCAATCTCTC +
Preference number: 2 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWNDKRS*HPDQSL
Trigger: GAGAGATTGATCTGGATGGCAAGACCGTTTATCATT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCCACCCCTCCGAATCTaGTTCCTTCCCTCAATTAAG +
Preference number: 2 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKPPLRI*FLPSIK
Trigger: CTTAATTGAGGGAAGGAAGCAGATTCGGAGGGGTGG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp GAAAGGCTGCTCCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTTGTTCCCCTGTCAACCCACATTaGCTGCACAGATACAGGTTT +
Preference number: 2 (lower is better)
Translates to: ERLLQFILPPIVHHSVCSPVNPH*LHRYRF
Trigger: AAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGG...GGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGGAGCAGCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
3UTR-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATGTAACGATACACTCTaGAACACCGGAAGACCCTCT +
Preference number: 2 (lower is better)
Translates to: THIYFLAVVEILANNVLGCNDTL*NTGRPS
Trigger: AGAGGGTCTTCCGGTGTTCCAGAGTGTATCGTTACA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACTTTAGAGAAATaGCAAACCTTCCAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWQTLEK*QTFQEK
Trigger: CTTTTCCTGGAAGGTTTGTCATTTCTCTAAAGTTTG...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACCACCCCTCCGAATCTaGTTCCTTCCCTCAATTAAG +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGPPLRI*FLPSIK
Trigger: CTTAATTGAGGGAAGGAAGCAGATTCGGAGGGGTGG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTTTATGACAGGCGCTaGTGCGTTAAGGATCTCCAC +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVYDRR*CVKDLH
Trigger: GTGGAGATCCTTAACGCAGCAGCGCCTGTCATAAAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AGGAATTCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTTGAATGTGCACTCACTATTTTaGAAGGCAGTGCACTCCACT +
Preference number: 2 (lower is better)
Translates to: RNSLYHLPGKMFSSLCLNVHSLF*KAVHST
Trigger: AGTGGAGTGCACTGCCTTGCAAAATAGTGAGTGCAC...ATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579954.1
3UTR-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACAGAGCACATTTTTCTaGCAGGGAGAGCCAAGATGC +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGQSTFF*QGEPRC
Trigger: GCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACAGAGCACATTTTTCTaGCAGGGAGAGCCAAGATGC +
Preference number: 2 (lower is better)
Translates to: CICIFLSAVISQKPVSSLQSTFF*QGEPRC
Trigger: GCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCTCACATATACTTCCTaGCTGTGGTTGAGATACTGG +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLTYTS*LWLRYW
Trigger: CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACGACAGCATCCTAAATaGAGTCACTGTGGGCACTTG +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGRQHPK*SHCGHL
Trigger: CAAGTGCCCACAGTGACTCCATTTAGGATGCTGTCG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCCTTCCCCATCATATTaGTGGTGGAACTGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKPSPSY*WWNCFK
Trigger: CTTGAAGCAGTTCCACCACCAATATGATGGGGAAGG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGTCTATCAAATCTGCTaGTTCAGGTCAGGTCATGAA +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSVYQIC*FRSGHE
Trigger: TTCATGACCTGACCTGAAGCAGCAGATTTGATAGAC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCTGTGGTTGAGATACTaGCAAACAATGTTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLWLRY*QTMFWD
Trigger: ATCCCAGAACATTGTTTGCCAGTATCTCAACCACAG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGACGCTTTTAGCAAGTaGTTTCTGTCCAACCTGCTT +
Preference number: 2 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKDAFSK*FLSNLL
Trigger: AAGCAGGTTGGACAGAAACCACTTGCTAAAAGCGTC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAAGTTCTGTATGCTCCTaGGGCTTTTACCCCATACAC +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGSSVCS*GFYPIH
Trigger: GTGTATGGGGTAAAAGCCCCAGGAGCATACAGAACT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CAA 90 bp GAGCCTTTAGGGGTGTCTCTGAGGAAAAAGTTACTAATGCATAATTaGGCAGGAGCTGGTGATTGGAAGTCTCCATTTAAACAACTACAG +
Preference number: 2 (lower is better)
Translates to: EPLGVSLRKKLLMHN*AGAGDWKSPFKQLQ
Trigger: CTGTAGTTGTTTAAATGGAGACTTCCAATCACCAGCTCCTGCCAAATTATGCATTAGTAACTTTTTCCTCAGAGACACCCCTAAAGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAACGAAAGCAAATCTaGAAGCCTCTTCAGTTTCAA +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQRKQI*KPLQFQ
Trigger: TTGAAACTGAAGAGGCTTGCAGATTTGCTTTCGTTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACTACAGAAGACCACTTaGATTTCATTTGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: CICIFLSAVISQKPVSSLLQKTT*ISFGVL
Trigger: CAGGACCCCAAATGAAATCCAAGTGGTCTTCTGTAG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACTCACATATACTTCCTaGCTGTGGTTGAGATACTGG +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGLTYTS*LWLRYW
Trigger: CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACCATCATATTGGTGGTaGAACTGCTTCAAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGPSYWW*NCFKKA
Trigger: TGCCTTCTTGAAGCAGTTCCACCACCAATATGATGG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp CCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTTGTTCCTTGAATCCCTGGCAAAACTAAGCCCATaGTACAAGTGCTACTGTCAT +
Preference number: 2 (lower is better)
Translates to: PVHSSTNSTSQCLFLESLAKLSP*YKCYCH
Trigger: ATGACAGTAGCACTTGTACCATGGGCTTAGTTTTGC...CAGGGATTCAAGGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
3UTR CAA 90 bp AGGAACACCCAATTCTGGGAGTCTGAAAAGGCTGGCACAAACTCCTaGGCATGGTTGAATGACAGATATTCTGTAGAAGATGTTTATTTA +
Preference number: 2 (lower is better)
Translates to: RNTQFWESEKAGTNS*AWLNDRYSVEDVYL
Trigger: TAAATAAACATCTTCTACAGAATATCTGTCATTCAACCATGCCAAGGAGTTTGTGCCAGCCTTTTCAGACTCCCAGAATTGGGTGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAAACTTTAGAGAAATaGCAAACCTTCCAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQTLEK*QTFQEK
Trigger: CTTTTCCTGGAAGGTTTGTCATTTCTCTAAAGTTTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCTTGGCATGGTTGAATaGCAGATATTCTGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKLGMVE*QIFCRR
Trigger: TCTTCTACAGAATATCTGTCATTCAACCATGCCAAG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACTTCAGGTCAGGTCATaGACAAAAGAAAAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGLQVRS*TKEKGK
Trigger: CTTTCCCTTTTCTTTTGTTCATGACCTGACCTGAAG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTCAATTAAGAAACCATaGCTTTTCTCAGAGGGCAAA +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSSIKKP*LFSEGK
Trigger: TTTGCCCTCTGAGAAAAGGCATGGTTTCTTAATTGA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCACACTGACTTTCGATTaGTGCTTTTCAAACATGTCA +
Preference number: 2 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSTLTFD*CFSNMS
Trigger: TGACATGTTTGAAAAGCAGCAATCGAAAGTCAGTGT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACCAAAACTTTGGTCCTaGTTGTACCTCTTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGPKLWS*LYLLVC
Trigger: ACACACTAAGAGGTACAAGCAGGACCAAAGTTTTGG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGCAGGAGCTGGTGATTaGAAGTCTCCATTTAAACAA +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGAGAGD*KSPFKQ
Trigger: TTGTTTAAATGGAGACTTCCAATCACCAGCTCCTGC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGAACAGTCCAAAACTTTaGTCCTGCTTGTACCTCTTA +
Preference number: 2 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKNSPKL*SCLYLL
Trigger: TAAGAGGTACAAGCAGGACCAAAGTTTTGGACTGTT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGAAGAGAAGACAGTCTaGAAAGTCCTTGACAGTTCA +
Preference number: 2 (lower is better)
Translates to: PPQNQENTKDPEETKMIGEEKTV*KVLDSS
Trigger: TGAACTGTCAAGGACTTTCCAGACTGTCTTCTCTTC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGACACTGACTTTCGATTaGTGCTTTTCAAACATGTCA +
Preference number: 2 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKTLTFD*CFSNMS
Trigger: TGACATGTTTGAAAAGCAGCAATCGAAAGTCAGTGT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACACTTGGATTTCATTTaGGGTCCTGTTTTAATTTCA +
Preference number: 2 (lower is better)
Translates to: THIYFLAVVEILANNVLGHLDFI*GPVLIS
Trigger: TGAAATTAAAACAGGACCCCAAATGAAATCCAAGTG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCTTACATATTACACCTaGCCCTTTTACAAACATTTC +
Preference number: 2 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKLTYYT*PFYKHF
Trigger: GAAATGTTTGTAAAAGGGGCAGGTGTAATATGTAAG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 72 bp GGGCCTGTGAGCAGAGTACCTCAGAGCCTGAGGCACTaGGATCTTCAGGCTGTCCTTGGAGCTCTGGGTAGT +
Preference number: 3 (lower is better)
Translates to: GPVSRVPQSLRH*DLQAVLGALGS
Trigger: ACTACCCAGAGCTCCAAGGACAGCCTGAAGATCTCAGTGCCTCAGGCTCTGAGGTACTCTGCTCACAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTATGTCAGACCCAGCCTaGGCTTCCACACAACTTCAC +
Preference number: 3 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAMSDPA*ASTQLH
Trigger: GTGAAGTTGTGTGGAAGCCAAGGCTGGGTCTGACAT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 72 bp ATCTCCACAACAGTAGCAAAACGACAGCATCCTAAATaGAGTCACTGTGGGCACTTGCCCCTGGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: ISTTVAKRQHPK*SHCGHLPLAEA
Trigger: GGCCTCAGCCAGGGGCAAGTGCCCACAGTGACTCCATTTAGGATGCTGTCGTTTTGCTACTGTTGTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCCCTTCCCCATCATATaGGTGGTGGAACTGCTTCAA +
Preference number: 3 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAPFPII*VVELLQ
Trigger: TTGAAGCAGTTCCACCACCAATATGATGGGGAAGGG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTACTTCCTGGCTGTGGTaGAGATACTGGCAAACAATG +
Preference number: 3 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTATSWLW*RYWQTM
Trigger: CATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAAGTCACTGTGGGCACTaGCCCCTGGCTGAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: CICIFLSAVISQKPVSSLSHCGH*PLAEAS
Trigger: GGAGGCCTCAGCCAGGGGCAAGTGCCCACAGTGACT...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCACACTGACTTTCGATaGCTGCTTTTCAAACATGTC +
Preference number: 3 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAHTDFR*LLFKHV
Trigger: GACATGTTTGAAAAGCAGCAATCGAAAGTCAGTGTG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 72 bp GCCATAAGTTCCTGCCCTTCCCCATCATATTGGTGGTaGAACTGCTTCAAGAAGGCAGGGTATTCTACATGG +
Preference number: 3 (lower is better)
Translates to: AISSCPSPSYWW*NCFKKAGYSTW
Trigger: CCATGTAGAATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATATGATGGGGAAGGGCAGGAACTTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 72 bp CCTGCCATAAGTTCCTGCCCTTCCCCATCATATTGGTaGTGGAACTGCTTCAAGAAGGCAGGGTATTCTACA +
Preference number: 3 (lower is better)
Translates to: PAISSCPSPSYW*WNCFKKAGYST
Trigger: TGTAGAATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATATGATGGGGAAGGGCAGGAACTTATGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTAACTCCTTGGCATGGTaGAATGACAGATATTCTGTA +
Preference number: 3 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTANSLAW*NDRYSV
Trigger: TACAGAATATCTGTCATTCAACCATGCCAAGGAGTT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 72 bp TCCGTCGATACACTGAACCCACCATCACCATCCAAATaGATTAGCGTGTCGCTCCAGAGAGGCAAAACTAAG +
Preference number: 3 (lower is better)
Translates to: SVDTLNPPSPSK*ISVSLQRGKTK
Trigger: CTTAGTTTTGCCTCTCTGGAGCGACACGCTAATTCATTTGGATGGTGATGGTGGGTTCAGTGTATCGACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
3UTR CCA 72 bp AGGAGCTTCCACTCTGGGCAACTCACATATACTTCCTaGCTGTGGTTGAGATACTGGCAAACAATGTTCTGG +
Preference number: 3 (lower is better)
Translates to: RSFHSGQLTYTS*LWLRYWQTMFW
Trigger: CCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTAACAGCAATTTGCCTTaGATAAAGGTGTTCTCTGAA +
Preference number: 3 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTANSNLP*IKVFSE
Trigger: TTCAGAGAACACCTTTATCAAAGGCAAATTGCTGTT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGGTTTTGTCCCATCTTaGTTGTTATTTAATGCAGTG +
Preference number: 3 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAGFVPS*LLFNAV
Trigger: CACTGCATTAAATAACAACAAAGATGGGACAAAACC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAGTCTGGAAAGTCCTaGACAGTTCACTGCGCACCT +
Preference number: 3 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQSGKS*TVHCAP
Trigger: AGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGAAGCTACAAGAGGCTaGTTTATGACAGGCGCTGCT +
Preference number: 3 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSEATRG*FMTGAA
Trigger: AGCAGCGCCTGTCATAAACAAGCCTCTTGTAGCTTC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 72 bp CAAAAATCAAGAAAGGGTTGGGGTTTCCCTTTCTACTaGCCAGGTTCAGCTCAAGTTCTGTATGCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: QKSRKGWGFPFY*PGSAQVLYAPG
Trigger: CCCAGGAGCATACAGAACTTGAGCTGAACCTGGTCAGTAGAAAGGGAAACCCCAACCCTTTCTTGATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR GCA 72 bp CTCCGAATCTGCTTCCTTCCCTCAATTAAGAAACCATaGCTTTTCTCAGAGGGCAAAATGAGAAGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: LRICFLPSIKKP*LFSEGKMRSRW
Trigger: CCACCTGCTTCTCATTTTGCCCTCTGAGAAAAGGCATGGTTTCTTAATTGAGGGAAGGAAGCAGATTCGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR GCA 72 bp AGAAGCTACAAGAGGCTTGTTTATGACAGGCGCTGCTaGGTTAAGGATCTCCACAACAGTAGCAAAACGACA +
Preference number: 3 (lower is better)
Translates to: RSYKRLVYDRRC*VKDLHNSSKTT
Trigger: TGTCGTTTTGCTACTGTTGTGGAGATCCTTAACGCAGCAGCGCCTGTCATAAACAAGCCTCTTGTAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR GCA 72 bp GTAAGAAGCTACAAGAGGCTTGTTTATGACAGGCGCTaGTGCGTTAAGGATCTCCACAACAGTAGCAAAACG +
Preference number: 3 (lower is better)
Translates to: VRSYKRLVYDRR*CVKDLHNSSKT
Trigger: CGTTTTGCTACTGTTGTGGAGATCCTTAACGCAGCAGCGCCTGTCATAAACAAGCCTCTTGTAGCTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 72 bp CCGGCCATTATCATGTCTTACTGTAACGATACACTCTaGAACACCGGAAGACCCTCTTTTAAAGCAAAGCGG +
Preference number: 3 (lower is better)
Translates to: PAIIMSYCNDTL*NTGRPSFKAKR
Trigger: CCGCTTTGCTTTAAAAGAGGGTCTTCCGGTGTTCCAGAGTGTATCGTTACAGTAAGACATGATAATGGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 72 bp TCCAAAACTTTGGTCCTGCTTGTACCTCTTAGTGTGTaGGATGTCATCATCGTAAGGGGTTACCACAAGTGG +
Preference number: 3 (lower is better)
Translates to: SKTLVLLVPLSV*DVIIVRGYHKW
Trigger: CCACTTGTGGTAACCCCTTACGATGATGACATCCCACACACTAAGAGGTACAAGCAGGACCAAAGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 72 bp ACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTaGGATACTGGCAAACAATGTTCTGGGATTTCAGTC +
Preference number: 3 (lower is better)
Translates to: TLGNSHILPGCG*DTGKQCSGISV
Trigger: GACTGAAATCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 72 bp GAGTGGATGAGATACTTGAACATTCAAGGAGACTACTaGGCAACAGCACAGGGTACACATAATCACTGCACC +
Preference number: 3 (lower is better)
Translates to: EWMRYLNIQGDY*ATAQGTHNHCT
Trigger: GGTGCAGTGATTATGTGTACCCTGTGCTGTTGCTCAGTAGTCTCCTTGAATGTTCAAGTATCTCATCCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 72 bp ACCCACATTGCCTGCACAGATACAGGTTTGAATATGTaGACTCTGTTATCCGTCGATACACTGAACCCACCA +
Preference number: 3 (lower is better)
Translates to: THIACTDTGLNM*TLLSVDTLNPP
Trigger: TGGTGGGTTCAGTGTATCGACGGATAACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
3UTR CCA 72 bp TTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTaGTTGAGATACTGGCAAACAATGTTCTGGGATTTC +
Preference number: 3 (lower is better)
Translates to: FHSGQLTYTSWL*LRYWQTMFWDF
Trigger: GAAATCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGAACAGCAATTTGCCTTaGATAAAGGTGTTCTCTGAA +
Preference number: 3 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGNSNLP*IKVFSE
Trigger: TTCAGAGAACACCTTTATCAAAGGCAAATTGCTGTT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTCAAACATGTCACTGTaGTTTTCAGTTGGGAGGACA +
Preference number: 3 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSSNMSL*FSVGRT
Trigger: TGTCCTCCCAACTGAAAACAACAGTGACATGTTTGA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATTACTAATGCATAATTaGGCAGGAGCTGGTGATTGG +
Preference number: 3 (lower is better)
Translates to: THIYFLAVVEILANNVLGLLMHN*AGAGDW
Trigger: CCAATCACCAGCTCCTGCCAAATTATGCATTAGTAA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAACTTCCTGGCTGTGGTaGAGATACTGGCAAACAATG +
Preference number: 3 (lower is better)
Translates to: PPQNQENTKDPEETKMIGTSWLW*RYWQTM
Trigger: CATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CCA 72 bp CAATATAGGTATCAATTCAGAAAATTCACACCAGATTaGGGATTGGTGGGAGAATGGGGAGGAGATGATGGT +
Preference number: 3 (lower is better)
Translates to: QYRYQFRKFTPD*GLVGEWGGDDG
Trigger: ACCATCATCTCCTCCCCATTCTCCCACCAATCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582084.1
3UTR-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACCACTTGGATTTCATTaGGGGTCCTGTTTTAATTTC +
Preference number: 3 (lower is better)
Translates to: THIYFLAVVEILANNVLGPLGFH*GSCFNF
Trigger: GAAATTAAAACAGGACCCCAAATGAAATCCAAGTGG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCAACTCCTTGGCATGGTaGAATGACAGATATTCTGTA +
Preference number: 3 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSNSLAW*NDRYSV
Trigger: TACAGAATATCTGTCATTCAACCATGCCAAGGAGTT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR TCA 72 bp TGGGTTTTGTCCCATCTTTGTTGTTATTTAATGCAGTaGGTGAACATTAAACACAGTGGAGGGGAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: WVLSHLCCYLMQ*VNIKHSGGEKR
Trigger: CCTCTTCTCCCCTCCACTGTGTTTAATGTTCACTCACTGCATTAAATAACAACAAAGATGGGACAAAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR GCA 72 bp TTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTaGTTGAATATTTCCAGCAATGTGCACTCACTATTT +
Preference number: 3 (lower is better)
Translates to: LYHLPGKMFSSL*LNISSNVHSLF
Trigger: AAATAGTGAGTGCACATTGCTGGAAATATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
3UTR CCA 72 bp ACTAGGACAAAGATCATGCAAAATGATAAGGCATATTaGCAAATCACTCTCCAGAAAGGCTGCTCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: TRTKIMQNDKAY*QITLQKGCSSS
Trigger: TGAACTGGAGCAGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
3UTR-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGATTTTCCTATTCATCTTaGCCAGTCTATCAAATCTGC +
Preference number: 3 (lower is better)
Translates to: PPQNQENTKDPEETKMIGFSYSS*PVYQIC
Trigger: GCAGATTTGATAGACTGGCAAAGATGAATAGGAAAA...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR-3UTR CAA 90 bp ATTCTCAAATCACAAAATCTTAGATTAGAAATAGTCTTAGAAGTCCCCCACTGCAATGTTCTCCAGCCTTaGCTTGAATATTTCCAGCAA +
Preference number: 3 (lower is better)
Translates to: ILKSQNLRLEIVLEVPHCNVLQP*LEYFQQ
Trigger: TTGCTGGAAATATTCAAGCAAAGGCTGGAGAACATT...GCAGTGGGGGACTTCTAAGACTATTTCTAATCTAAGATTTTGTGATTTGAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR TCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGTTCTGCCGTGTTGCTaGCGGGGTGCCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGVLPCC*RGATAS
Trigger: GCTGGCCGTGGCACCCCGTCAGCAACACGGCAGAAC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTGGGGGACGGGAGGGTaGCGGAGCCGGGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAWGTGG*RSRDGE
Trigger: TTCCCCATCCCGGCTCCGTCACCCTCCCGTCCCCCA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTGGGGGACGGGAGGGTaGCGGAGCCGGGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSWGTGG*RSRDGE
Trigger: TTCCCCATCCCGGCTCCGTCACCCTCCCGTCCCCCA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCAGGGCATTCTTGTCCTaGGTGTGGGGGACGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGRAFLS*VWGTGG
Trigger: CCCTCCCGTCCCCCACACTCAGGACAAGAATGCCCT...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGTTCTGCCGTGTTGCTaGCGGGGTGCCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQVLPCC*RGATAS
Trigger: GCTGGCCGTGGCACCCCGTCAGCAACACGGCAGAAC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGGGGTAGGTGACCGCTaGACCGTGACCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGGVGDR*TVTKAI
Trigger: GATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCACTTGGCACCTGGGTaGATCCCTGAGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAHLAPG*IPEPWS
Trigger: GCTCCAGGGCTCAGGGATGCACCCAGGTGCCAAGTG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCAGCACCCTGGGAGCTaGAACAGTGGCATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGQHPGS*NSGILL
Trigger: GAGCAGAATGCCACTGTTCCAGCTCCCAGGGTGCTG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTACCTGGGTGCATCCCTaGGCCCTGGAGCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTATWVHP*ALELLF
Trigger: GAACAAGAGCTCCAGGGCTCAGGGATGCACCCAGGT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCATCGCGTGCATGCCTaGGTCTGTTCTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGHRVHA*VCSEER
Trigger: CCTTTCCTCAGAACAGACTCAGGCATGCACGCGATG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGTGACGGAGCCGGGATaGGGAAAGGGGTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIVTEPG*GKGCGV
Trigger: CACCCCGCACCCCTTTCCCCATCCCGGCTCCGTCAC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CACCATCCAAATGAATTAGCGTGTCGCTCCAGAGAGGCAAAACTAAGCCCATGGGTGACGGAGCCGGGATaGGGAAAGGGGTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: HHPNELACRSREAKLSPWVTEPG*GKGCGV
Trigger: CACCCCGCACCCCTTTCCCCATCCCGGCTCCGTCAC...CCATGGGCTTAGTTTTGCCTCTCTGGAGCGACACGCTAATTCATTTGGATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACCATCTAGGCGCTGCTaGGTTGTTCCGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQPSRRC*VVPGRA
Trigger: TGCCCTGCCCGGAACAACCCAGCAGCGCCTAGATGG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGGAGAGTCGGGCCGGTaGGACTGTACATCTTGCATT +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGGESGR*DCTSCI
Trigger: AATGCAAGATGTACAGTCCCACCGGCCCGACTCTCC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGTCGGTGAAGAGAGCTaGAGAGTCGGGCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQVGEES*RVGPVG
Trigger: TCCCACCGGCCCGACTCTCCAGCTCTCTTCACCGAC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTTGGCTAGTTCAGGCTaGGCTGTGCAGGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGLASSG*AVQESS
Trigger: TGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTACCCAGGGTACCACTTaGCACCTGGGTGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTATQGTT*HLGASL
Trigger: CAGGGATGCACCCAGGTGCCAAGTGGTACCCTGGGT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGCACCTCACTGCCACTaGAGAGAGGGCTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAAPHCH*REGSPD
Trigger: GTCAGGAGAGCCCTCTCTCCAGTGGCAGTGAGGTGC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TCACAGTGTTTGTTCCTTGAATCCCTGTCAACCCACATTGCCTGCACAGATACATGGGGGACGGGAGGGTaGCGGAGCCGGGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: SQCLFLESLSTHIACTDTWGTGG*RSRDGE
Trigger: TTCCCCATCCCGGCTCCGTCACCCTCCCGTCCCCCA...TGTATCTGTGCAGGCAATGTGGGTTGACAGGGATTCAAGGAACAAACACTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAATCTGTCTGGGGCCTGTaGGCAGAGTACCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQSVWGL*AEYLRA
Trigger: GGCTCTGAGGTACTCTGCTCACAGGCCCCAGACAGA...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCAGACTGTCGCCGACTaGCGCTCCGAACGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIQTVAD*RSERAA
Trigger: CGCCGCCCGTTCGGAGCGTCAGTCGGCGACAGTCTG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540801.6
CDS-3UTR GCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGGTTTCTGTCCAACCTaGTTCCTGGCAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGGFCPT*FLAGMS
Trigger: TGACATCCCTGCCAGGAAGCAGGTTGGACAGAAACC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCGTGACCGGGTTTCTTaGGAGAGCTCCACAAACTTC +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGRDRVS*ESSTNF
Trigger: GAAGTTTGTGGAGCTCTCCCAAGAAACCCGGTCACG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCAAGGGGCCTCTCCACTaGCTTGCTCTGCACAATACA +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGKGPLH*LALHNT
Trigger: TGTATTGTGCAGAGCAAGCCAGTGGAGAGGCCCCTT...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGTGACCGCTGGACCGTaGCCAAAGCCATCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWVTAGP*PKPSRR
Trigger: GCGCCTAGATGGCTTTGGTCACGGTCCAGCGGTCAC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGTCTTACAGCCAGCCTaGTGTTGTCTTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAVLQPA*CCLLGG
Trigger: TCCGCCCAGAAGACAACATCAGGCTGGCTGTAAGAC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCTCAGAATGGGACAGTaGGCCAGCCTCAGACCCACT +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSLRMGQ*ASLRPT
Trigger: AGTGGGTCTGAGGCTGGCTCACTGTCCCATTCTGAG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTCAGGGGAGGAAGAATaGGGCAGAGGTAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTASGEEE*GRGSTW
Trigger: CCAAGTGCTACCTCTGCCTCATTCTTCCTCCCCTGA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACCACCAGCATTGCTTTaGGGACACAGACGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQPPALL*GHRRQH
Trigger: GTGCTGCCGTCTGTGTCCTCAAAGCAATGCTGGTGG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTGGAGATCGCCTGCATaGTTGTTCCGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAWRSPA*LFRLWL
Trigger: CAGCCACAGACGGAACAAGCATGCAGGCGATCTCCA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGTTTATGACAGGCGCTaGTGCGTTAAGGATCTCCAC +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGVYDRR*CVKDLH
Trigger: GTGGAGATCCTTAACGCAGCAGCGCCTGTCATAAAC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGTCTGGCAACTGGGTTaGGGGCTTGGTGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSVWQLG*GLGDSG
Trigger: TCCTGAGTCACCAAGCCCCCAACCCAGTTGCCAGAC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTCTGAGATTTCAGTCTaGCAACTGGGTTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSEISV*QLGWGL
Trigger: AAGCCCCCAACCCAGTTGCCAGACTGAAATCTCAGA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACTTCGAACTCCAAGGTaGCTCGCCTCACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQLRTPR*LASQTQ
Trigger: CTGGGTCTGTGAGGCGAGCCACCTTGGAGTTCGAAG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCTTCGAACTCCAAGGTaGCTCGCCTCACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSLRTPR*LASQTQ
Trigger: CTGGGTCTGTGAGGCGAGCCACCTTGGAGTTCGAAG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCGCTCTTCTCACTGGTaGCTATTTCACTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTARSSHW*LFHSLA
Trigger: GGCCAGGGAGTGAAATAGCCACCAGTGAGAAGAGCG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTCTGCGCTACTTAGCTaGGAGTCCTTATATGGCACC +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSALLS*ESLYGT
Trigger: GGTGCCATATAAGGACTCCCAGCTAAGTAGCGCAGA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCAGCAATCTGGTCTGCTaGGGTGGTGATATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSNLVC*GGDILL
Trigger: AAGAAGGATATCACCACCTCAGCAGACCAGATTGCT...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGTTGGGGCAGCACCATaGTGCTCTTGCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGVGAAP*CSCSCR
Trigger: ACGGCAGGAGCAAGAGCATCATGGTGCTGCCCCAAC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTTTGGGATGGTTTGGTaGGCCCTGCCTGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAFGMVW*ALPGKP
Trigger: TGGTTTTCCAGGCAGGGCTCACCAAACCATCCCAAA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGCGGCTGGATGAAGGCTaGGAGCCCTCTGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGRLDEG*EPSDFW
Trigger: CCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCG...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTAGTCTGGAAAGTCCTTaGCAGTTCACTGCGCACCTC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTASLESP*QFTAHL
Trigger: GAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACAGAGCCTGAGGCACTaGGATCTTCAGGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQQSLRH*DLQAVL
Trigger: AAGGACAGCCTGAAGATCTCAGTGCCTCAGGCTCTG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTGGAGATCGCCTGCATaGTTGTTCCGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSWRSPA*LFRLWL
Trigger: CAGCCACAGACGGAACAAGCATGCAGGCGATCTCCA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGGTCGCCCTGCCATCTaGCCCCACCAAACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIGRPAI*PHQTLA
Trigger: GGCCAGAGTTTGGTGGGGGCAGATGGCAGGGCGACC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCTTGTTGGCCATTTCTaGGACATGTCCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGLVGHF*DMSRLN
Trigger: ATTCAGCCTGGACATGTCCCAGAAATGGCCAACAAG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAATTGGCTAGTTCAGGCTaGGCTGTGCAGGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQLASSG*AVQESS
Trigger: TGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAA...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTACATCCCTGAGTCTTTaGCTAGTTCAGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTATSLSL*LVQAGL
Trigger: CAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGCATTCTGCTCAGAATaGGACAGTGAGCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAAFCSE*DSEPAS
Trigger: TGAGGCTGGCTCACTGTCCCATTCTGAGCAGAATGC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTGGGAGCTGGAACAGTaGCATTCTGCTCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAWELEQ*HSAQNG
Trigger: CCCATTCTGAGCAGAATGCCACTGTTCCAGCTCCCA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCAGGTTGGATGGTCAGTaGGTCTGTTGTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSRLDGQ*VCCAQG
Trigger: CCCCTGAGCACAACAGACCCACTGACCATCCAACCT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGTGGGCTCTGGGTTGTaGGGGGCACCTGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWVGSGL*GAPGFS
Trigger: AGAAAACCCAGGTGCCCCCCACAACCCAGAGCCCAC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGCACACTGCAGTCCCTaGGTCTGTAGCACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWAHCSP*VCSTGR
Trigger: CCTTCCCGTGCTACAGACCCAGGGACTGCAGTGTGC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAACCCAGCAGTTTCTaGGCAGCAGCCTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWQPSSF*AAASPP
Trigger: GGGTGGAGAGGCTGCTGCCCAGAAACTGCTGGGTTG...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGCAACCCAGCAGTTTCTaGGCAGCAGCCTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGQPSSF*AAASPP
Trigger: GGGTGGAGAGGCTGCTGCCCAGAAACTGCTGGGTTG...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGTGGGCACTTGCCCCTaGCTGAGGCCTCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGVGTCP*LRPPLW
Trigger: CCACAGGGGAGGCCTCAGCCAGGGGCAAGTGCCCAC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTATGGGAAAAAGATCGTaGCCGGGTTTCTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAMGKRS*PGFLGE
Trigger: CTCTCCCAAGAAACCCGGTCACGATCTTTTTCCCAT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCATCTGCCCAACTCCTTaGCTGATGGACTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGICPTP*LMDSIS
Trigger: TGAAATTGAGTCCATCAGTCAAGGAGTTGGGCAGAT...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCTCAGAATGGGACAGTaGGCCAGCCTCAGACCCACT +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPILRMGQ*ASLRPT
Trigger: AGTGGGTCTGAGGCTGGCTCACTGTCCCATTCTGAG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCTCCCTGGCCCAGTGTaGTTGGGTGATGTAACTATG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSLPGPV*LGDVTM
Trigger: CATAGTTACATCACCCAATCACACTGGGCCAGGGAG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGTGAAGCCCTCCAGGTaGACCATAGTCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIVKPSR*TIVWGC
Trigger: GCATCCCCAGACTATGGTTCACCTGGAGGGCTTCAC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTGCCTGAGTCTGTTCTaGGGAAAGGCTGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTACLSLF*GKAEAV
Trigger: AACTGCTTCAGCCTTTCCTCAGAACAGACTCAGGCA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACCAAACTCTGGCCTCTaGCATCATGCTGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQPNSGL*HHADSL
Trigger: CAGACTGTCAGCATGATGTCAGAGGCCAGAGTTTGG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCACCAGCATTGCTTTaGGGACACAGACGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIPPALL*GHRRQH
Trigger: GTGCTGCCGTCTGTGTCCTCAAAGCAATGCTGGTGG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTCACTGTCTTCCAAATaGGAGCTCGAGGCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGSLSSK*ELEAQG
Trigger: CCCCTGCGCCTCGAGCTCTCATTTGGAAGACAGTGA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540801.6
CDS-3UTR GCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACGCCAGGAGATCCGTTaGCTCTTCATCATATACCCG +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQRQEIR*LFIIYP
Trigger: CGGGTATATGATGAAGAGGCAACGGATCTCCTGGCG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGTTCTAGCCCAGGTTTaGAGATGGGTTCGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQVLAQV*RWVRGG
Trigger: ACCACCACGAACCCATCTGCAAACCTGGGCTAGAAC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGGTAGCACTTGGGGGTaGAGAGAAACCTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIGSTWG*RETWLG
Trigger: CCCCAACCAGGTTTCTCTGCACCCCCAAGTGCTACC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGGTAGCACTTGGGGGTaGAGAGAAACCTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWGSTWG*RETWLG
Trigger: CCCCAACCAGGTTTCTCTGCACCCCCAAGTGCTACC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCCAGCTAACCTGTTCTaGAGAGGGCTCATCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAPANLF*RGLICS
Trigger: ACTACAGATGAGCCCTCTGCAGAACAGGTTAGCTGG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAATGGTTTGGTGAGCCCTaGCTGGAAAACCACTCGAGA +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQWFGEP*LENHSR
Trigger: TCTCGAGTGGTTTTCCAGGCAGGGCTCACCAAACCA...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTCCACTGGCTTGCTCTaGACAATACACTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSTGLL*TIHSVV
Trigger: AACAACAGAGTGTATTGTGCAGAGCAAGCCAGTGGA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGTGTTGCTGACGGGGTaGCACGGCCAGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKVLLTG*HGQPWS
Trigger: GCTCCAGGGCTGGCCGTGGCACCCCGTCAGCAACAC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGTTTATGACAGGCGCTaGTGCGTTAAGGATCTCCAC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAVYDRR*CVKDLH
Trigger: GTGGAGATCCTTAACGCAGCAGCGCCTGTCATAAAC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTCTTTTGGGTCGCCCTaGCATCTGCCCCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWSFGSP*HLPPPN
Trigger: GTTTGGTGGGGGCAGATGGCAGGGCGACCCAAAAGA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCCTGCCATAAGTTCCTaGCCTTCCCCATCATATTGG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAPAISS*PSPSYW
Trigger: CCAATATGATGGGGAAGGGCAGGAACTTATGGCAGG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCCAGTCTATCAAATCTaGTGCTTCAGGTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGPVYQI*CFRSGH
Trigger: ATGACCTGACCTGAAGCAGCAGATTTGATAGACTGG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTATTTCCATAGAGAGTaGTGGATGGGAGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAYFHRE*WMGGQD
Trigger: GTCCTGCCCTCCCATCCAGCACTCTCTATGGAAATA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGACGGGGCCACCGAGGCTaGAGGTGCAAGCGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRRGHRG*RCKRGA
Trigger: CGCCCCTCGCTTGCACCTGCAGCCTCGGTGGCCCCG...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGCTTGGAGATGCTGTTaGAGATCGCCTGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSAWRCC*RSPACL
Trigger: CAAGCATGCAGGCGATCTCCAACAGCATCTCCAAGC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACAAAGACAGGAGGTATaGGTGGGTGACTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQQRQEV*VGDSPW
Trigger: CCATGGAGAGTCACCCACCCATACCTCCTGTCTTTG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTCCATAGGCAGTAGGTaGACATTCATGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSIGSR*TFMSAF
Trigger: GAAAGCAGACATGAATGTCCACCTACTGCCTATGGA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACGTGACCGGGTTTCTTaGGAGAGCTCCACAAACTTC +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQRDRVS*ESSTNF
Trigger: GAAGTTTGTGGAGCTCTCCCAAGAAACCCGGTCACG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAACATCCCTGAGTCTTTaGCTAGTTCAGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQTSLSL*LVQAGL
Trigger: CAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGT...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCTCCGCTCTTCTCACTaGTGGCTATTTCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSLRSSH*WLFHSL
Trigger: CAGGGAGTGAAATAGCCACCAGTGAGAAGAGCGGAG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTACTCAGGATGGAGGTTaGATGGTCAGTGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTATQDGG*MVSGSV
Trigger: AACAGACCCACTGACCATCCAACCTCCATCCTGAGT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGCAGGTAATCCAAACTaGCAGACAGTAAATGGGTTG +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGAGNPN*QTVNGL
Trigger: CAACCCATTTACTGTCTGCCAGTTTGGATTACCTGC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTATTCAAGTCCTGCCCTaGGGAGCAAATACTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAIQVLP*GANTAD
Trigger: GTCAGCAGTATTTGCTCCCCAGGGCAGGACTTGAAT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCTACAGAAGACCACTTaGATTTCATTTGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGLQKTT*ISFGVL
Trigger: CAGGACCCCAAATGAAATCCAAGTGGTCTTCTGTAG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCAGAGCACATTTTTCTaGCAGGGAGAGCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAQSTFF*QGEPRC
Trigger: GCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTCCCCATCATATTGGTaGTGGAACTGCTTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSPSYW*WNCFKK
Trigger: CTTCTTGAAGCAGTTCCACCACCAATATGATGGGGA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCTGTCCTTGGAGCTCTaGGTAGTTTGCAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGLSLEL*VVCKMR
Trigger: TCTCATTTTGCAAACTACCCAGAGCTCCAAGGACAG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CAA 72 bp CCACCCTGCCATAAGTTCCTGCCCTTCCCCATCATATaGGTGGTGGAACTGCTTCAAGAAGGCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: PPCHKFLPFPII*VVELLQEGRVF
Trigger: GAATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATATGATGGGGAAGGGCAGGAACTTATGGCAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTTAGAAAGCTCTCGCTaGTGCTCCTGGGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGLESSR*CSWAVT
Trigger: GGTCACAGCCCAGGAGCATCAGCGAGAGCTTTCTAA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTATCCGTCGATACACTaGACCCACCATCACCATCCA +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSYPSIH*THHHHP
Trigger: TGGATGGTGATGGTGGGTTCAGTGTATCGACGGATA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGAATCACGGTGGAGGCTaGGCGACTCACCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGNHGGG*ATHPHF
Trigger: AAAATGGGGGTGAGTCGCTCAGCCTCCACCGTGATT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCATGGGAAAAAGATCGTaGCCGGGTTTCTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSMGKRS*PGFLGE
Trigger: CTCTCCCAAGAAACCCGGTCACGATCTTTTTCCCAT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGACCCTGGGCCCTCCTaGGGATCTGGCAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGDPGPS*GSGKWS
Trigger: TGACCACTTGCCAGATCCTCAGGAGGGCCCAGGGTC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTCAGGGGAGGAAGAATaGGGCAGAGGTAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWSGEEE*GRGSTW
Trigger: CCAAGTGCTACCTCTGCCTCATTCTTCCTCCCCTGA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCAGTAAATGGGTTGTATaGCTGACAAAAGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSKWVV*LTKGAA
Trigger: AGCAGCACCTTTTGTCAGTCATACAACCCATTTACT...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTTTGGCGAGAGAAGCTaGGCGCCTCATTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGFGERS*APHLGW
Trigger: CCATCCCAAATGAGGCGCTCAGCTTCTCTCGCCAAA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGGGAGCAAATACTGCTaGCTAGAACCAAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGGSKYC*LEPNSL
Trigger: CAAAGAATTTGGTTCTAGTCAGCAGTATTTGCTCCC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAGAGCCTGAGGCACTaGGATCTTCAGGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWQSLRH*DLQAVL
Trigger: AAGGACAGCCTGAAGATCTCAGTGCCTCAGGCTCTG...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGGCAGCCTTCTGGGTTaGACATCCCTGAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGGSLLG*TSLSLW
Trigger: CCAAAGACTCAGGGATGTGCAACCCAGAAGGCTGCC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACACTTGGCACCTGGGTaGATCCCTGAGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGHLAPG*IPEPWS
Trigger: GCTCCAGGGCTCAGGGATGCACCCAGGTGCCAAGTG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCATGACTGACAAAAGGTaGTGCTGTCTCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSMTDKR*CCLQGC
Trigger: ACAGCCCTGGAGACAGCAGCACCTTTTGTCAGTCAT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAATGACTGACAAAAGGTaGTGCTGTCTCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQMTDKR*CCLQGC
Trigger: ACAGCCCTGGAGACAGCAGCACCTTTTGTCAGTCAT...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTCTGTAGTGCTGCTCTaGTCTGTGAAGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPISVVLL*SVKPSR
Trigger: CCTGGAGGGCTTCACAGAGCAGAGCAGCACTACAGA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGTGTTGCTGACGGGGTaGCACGGCCAGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLVLLTG*HGQPWS
Trigger: GCTCCAGGGCTGGCCGTGGCACCCCGTCAGCAACAC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCCACCCCTCCGAATCTaGTTCCTTCCCTCAATTAAG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSPPLRI*FLPSIK
Trigger: CTTAATTGAGGGAAGGAAGCAGATTCGGAGGGGTGG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAAGCTCAAGTTCTGTATaGTCCTGGGGCTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQSSSSV*SWGFYP
Trigger: GGGGTAAAAGCCCCAGGAGCATACAGAACTTGAGCT...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCAGCTCAAGTTCTGTATaGTCCTGGGGCTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSSSSSV*SWGFYP
Trigger: GGGGTAAAAGCCCCAGGAGCATACAGAACTTGAGCT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGTGACGGAGCCGGGATaGGGAAAGGGGTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLVTEPG*GKGCGV
Trigger: CACCCCGCACCCCTTTCCCCATCCCGGCTCCGTCAC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCACCCAGGGTACCACTTaGCACCTGGGTGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFITQGTT*HLGASL
Trigger: CAGGGATGCACCCAGGTGCCAAGTGGTACCCTGGGT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGCCCTCCTGAGGATCTaGCAAGTGGTCAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWALLRI*QVVKLQ
Trigger: CTGGAGTTTGACCACTTGCCAGATCCTCAGGAGGGC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGCAGAGAAACCTGGTTaGGGTCCAGAGTCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSAEKPG*GPESCL
Trigger: TAAACAGGACTCTGGACCCCAACCAGGTTTCTCTGC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTTGGTGAGCCCTGCCTaGAAAACCACTCGAGACTCG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGLVSPA*KTTRDS
Trigger: CGAGTCTCGAGTGGTTTTCCAGGCAGGGCTCACCAA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTGGGCACTTGCCCCTaGCTGAGGCCTCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVGTCP*LRPPLW
Trigger: CCACAGGGGAGGCCTCAGCCAGGGGCAAGTGCCCAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCGACAGCATCCTAAATaGAGTCACTGTGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSRQHPK*SHCGHL
Trigger: CAAGTGCCCACAGTGACTCCATTTAGGATGCTGTCG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCAGGAACACCCAATTCTaGGAGTCTGAAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSRNTQF*ESEKAG
Trigger: GCCAGCCTTTTCAGACTCCCAGAATTGGGTGTTCCT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTAGTTCTGTATGCTCCTaGGGCTTTTACCCCATACAC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTASSVCS*GFYPIH
Trigger: GTGTATGGGGTAAAAGCCCCAGGAGCATACAGAACT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCTCTGGGGGACGGGAGGGTaGCGGAGCCGGGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: QSIIIYCRLENCSRSQWLWGTGG*RSRDGE
Trigger: TTCCCCATCCCGGCTCCGTCACCCTCCCGTCCCCCA...GAGCCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590153.1
CDS-3UTR TCA 90 bp TCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTTGAATATTTCCGTGACCGCTGGACCGTaGCCAAAGCCATCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: SLYHLPGKMFSSLCLNISVTAGP*PKPSRR
Trigger: GCGCCTAGATGGCTTTGGTCACGGTCCAGCGGTCAC...GGAAATATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGGTGCTGGGGGTAGGTaGCCGCTGGACCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLGAGGR*PLDRDQ
Trigger: TTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGGTGCTGGGGGTAGGTaGCCGCTGGACCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGGAGGR*PLDRDQ
Trigger: TTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTGTTCCGTCTGTGGCTaGTTCTTGGTGTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGCSVCG*FLVWMS
Trigger: GCTCATCCACACCAAGAATCAGCCACAGACGGAACA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTGTTCCGTCTGTGGCTaGTTCTTGGTGTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWCSVCG*FLVWMS
Trigger: GCTCATCCACACCAAGAATCAGCCACAGACGGAACA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCTTCCAGTTGTCTCATaGAGCTTGGGTTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPILPVVS*SLGWAW
Trigger: CCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGCCAGCAAGATCCCCTaGTACTCTTCCAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGASKIP*YSSSCL
Trigger: GAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGTTGGGGCAGCACCATaGTGCTCTTGCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGVGAAP*CSCSCR
Trigger: ACGGCAGGAGCAAGAGCATCATGGTGCTGCCCCAAC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCTGTGTTCCAGTATCTaGCCCTGGGCCCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLCSSI*PWALLR
Trigger: CCTCAGGAGGGCCCAGGGTCAGATACTGGAACACAG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCTCCCTGGCCCAGTGTaGTTGGGTGATGTAACTATG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPILPGPV*LGDVTM
Trigger: CATAGTTACATCACCCAATCACACTGGGCCAGGGAG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGCCTCTGACTTCTGGCTaGCCTTTAGCCCATTCGATG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGPLTSG*PLAHSM
Trigger: CATCGAATGGGCTAAAGGTCAGCCAGAAGTCAGAGG...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGGTTTCCCTTTCTACTaGCCAGGTTCAGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQGFPFY*PGSAQV
Trigger: AACTTGAGCTGAACCTGGTCAGTAGAAAGGGAAACC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGGTTTGAATATGTGAACTCTGTTATCCGTCGATACACTGAACCCACCATCACCAAGCCATCTAGGCGCTaGTGGGTTGTTCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RFEYVNSVIRRYTEPTITKPSRR*WVVPGR
Trigger: CCTGCCCGGAACAACCCAGCAGCGCCTAGATGGCTT...GGTGATGGTGGGTTCAGTGTATCGACGGATAACAGAGTTCACATATTCAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCAACATTGCTTGGAGATaGTGTTGGAGATCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSNIAWR*CWRSPA
Trigger: TGCAGGCGATCTCCAACAGCATCTCCAAGCAATGTT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGAGCCCAGGAACACATaGTCAAATATCTGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSEPRNT*SNICVG
Trigger: CCCTACACAGATATTTGAGCATGTGTTCCTGGGCTC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCAGTCAATTCAAGTCCTaGCCTGGGGAGCAAATACTG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSSQFKS*PGEQIL
Trigger: CAGTATTTGCTCCCCAGGGCAGGACTTGAATTGACT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGCTGGGCATGCACACTaGAGTCCCTGGGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSAGHAH*SPWVCS
Trigger: GCTACAGACCCAGGGACTGCAGTGTGCATGCCCAGC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCAATGATAAACGGTCTTaGCATCCAGATCAATCTCTC +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGNDKRS*HPDQSL
Trigger: GAGAGATTGATCTGGATGGCAAGACCGTTTATCATT...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCTGACTTTCGATTGCTaGTTTTCAAACATGTCACTG +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGLTFDC*FSNMSL
Trigger: CAGTGACATGTTTGAAAAGCAGCAATCGAAAGTCAG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGGTCGCCCTGCCATCTaGCCCCACCAAACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGGRPAI*PHQTLA
Trigger: GGCCAGAGTTTGGTGGGGGCAGATGGCAGGGCGACC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTTCCTGGCCTCTGCTCTaGTCCGGCACGAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKASWPLL*SGTRRR
Trigger: CCTGCGCCTCGTGCCGGAGCAGAGCAGAGGCCAGGA...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR GCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAGGGGCGCCTTCCTCTTaGGGGCCAACGTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRGAPSS*GPTCSG
Trigger: CCCTGAGCACGTTGGCCCGCAAGAGGAAGGCGCCCC...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR GCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGACACCGAGGCTGCAGGTaGAAGCGAGGGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRHRGCR*KRGAPS
Trigger: GGAAGGCGCCCCTCGCTTGCACCTGCAGCCTCGGTG...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTGCTTGTTCCGTCTGTaGCTGATTCTTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSCLFRL*LILGVD
Trigger: ATCCACACCAAGAATCAGCCACAGACGGAACAAGCA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGTCGGTGAAGAGAGCTaGAGAGTCGGGCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKVGEES*RVGPVG
Trigger: TCCCACCGGCCCGACTCTCCAGCTCTCTTCACCGAC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTCCAGGTTTGTTCTCTaGAGTCTGGGCCCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGSRFVL*SLGPLK
Trigger: CTTGAGAGGGCCCAGACTCCAGAGAACAAACCTGGA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTTGTTCCCCCTCAGCTaGTTCCCCTTCTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPILFPLS*FPFFQV
Trigger: GACTTGGAAGAAGGGGAACCAGCTGAGGGGGAACAA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGGGTGCAGAGAAACCTaGTTGGGGTCCAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIGCRET*LGSRVL
Trigger: CAGGACTCTGGACCCCAACCAGGTTTCTCTGCACCC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGCGCCTCATTTGGGATaGTTTGGTGAGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIAPHLG*FGEPCL
Trigger: CAGGCAGGGCTCACCAAACCATCCCAAATGAGGCGC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGTGGGCTCTGGGTTGTaGGGGGCACCTGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSVGSGL*GAPGFS
Trigger: AGAAAACCCAGGTGCCCCCCACAACCCAGAGCCCAC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTGTAACGATACACTCTaGAACACCGGAAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSCNDTL*NTGRPS
Trigger: AGAGGGTCTTCCGGTGTTCCAGAGTGTATCGTTACA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGTGACCGCTGGACCGTaGCCAAAGCCATCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLVTAGP*PKPSRR
Trigger: GCGCCTAGATGGCTTTGGTCACGGTCCAGCGGTCAC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTGGTGCTGGGGGTAGGTaGCCGCTGGACCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKAGAGGR*PLDRDQ
Trigger: TTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACC...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCATCACCATCCAAATaGATTAGCGTGTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIPSPSK*ISVSLQ
Trigger: CTGGAGCGACACGCTAATTCATTTGGATGGTGATGG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTCATTGACTGAGGATTaGTCTGAGTTGATATGGCTC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTASLTED*SELIWL
Trigger: GAGCCATATCAACTCAGATCAATCCTCAGTCAATGA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGGAGGTATGGGTGGGTaGCTCTCCATGGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGGGMGG*LSMVFT
Trigger: GGTGAAGACCATGGAGAGTCACCCACCCATACCTCC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGGAGGTATGGGTGGGTaGCTCTCCATGGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSGGMGG*LSMVFT
Trigger: GGTGAAGACCATGGAGAGTCACCCACCCATACCTCC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGGGACATGTCCAGGCTaGATTAAGGCTTTGGATGCA +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIGTCPG*IKALDA
Trigger: TGCATCCAAAGCCTTAATTCAGCCTGGACATGTCCC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGACCTGGGTGCATCCCTaGGCCCTGGAGCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKTWVHP*ALELLF
Trigger: GAACAAGAGCTCCAGGGCTCAGGGATGCACCCAGGT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCAAGGCTGAAGCAGTTTaGGATGAGGGGATTCACAGG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIKAEAV*DEGIHR
Trigger: CCTGTGAATCCCCTCATCTCAAACTGCTTCAGCCTT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGAGATTATAAAAGTCTaGAGAGAAGACAGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGEIIKV*REDSLE
Trigger: TTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CTACAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCAGACTGTCGCCGACTaGCGCTCCGAACGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LQSIIIYCRLENCSRSQWQTVAD*RSERAA
Trigger: CGCCGCCCGTTCGGAGCGTCAGTCGGCGACAGTCTG...CCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR TCA 90 bp TTAACCCTGGATCAATATAGGTATCAATTCAGAAAATTCACACCAGATTGGGGAAGCTGCGGGGCACAATaGGCGCTCCCAGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LTLDQYRYQFRKFTPDWGSCGAQ*ALPVRR
Trigger: CCTGCGCACTGGGAGCGCTCATTGTGCCCCGCAGCT...TCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTGATCCAGGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS-3UTR GCA 90 bp TCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTTGAATATTTCCAAGCCATCTAGGCGCTaGTGGGTTGTTCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLYHLPGKMFSSLCLNISKPSRR*WVVPGR
Trigger: CCTGCCCGGAACAACCCAGCAGCGCCTAGATGGCTT...GGAAATATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCCATTCCTAGGACGATaGTTTCTTCAGTGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSPFLGR*FLQCLV
Trigger: GACAAGACACTGAAGAAAGCATCGTCCTAGGAATGG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGCCATATTCCTTCATTaGATAGGCAATCACGGTGGA +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQAIFLH*IGNHGG
Trigger: TCCACCGTGATTGCCTATGCAATGAAGGAATATGGC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGATGCCGCTGTTTGCTTaGCAGCAAGATCCCCTGATA +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGMPLFA*QQDPLI
Trigger: TATCAGGGGATCTTGCTGGCAAGCAAACAGCGGCAT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGGAGCAGCTCATGGATaGTGTTCTTCTTTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQGAAHG*CSSLVY
Trigger: ATACACCAAAGAAGAACAGCATCCATGAGCTGCTCC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCAAGGGGAAGAGGGACTaGTTGTGTTTCAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIKGKRD*LCFRLL
Trigger: CAGGAGTCTGAAACACAAGCAGTCCCTCTTCCCCTT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCTGTGGACAGGCTGCTaGCTCTGTCTTCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLWTGC*LCLQGY
Trigger: GTAGCCCTGAAGACAGAGGCAGCAGCCTGTCCACAG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTCCACTGGCTTGCTCTaGACAATACACTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSSTGLL*TIHSVV
Trigger: AACAACAGAGTGTATTGTGCAGAGCAAGCCAGTGGA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGCTGGGCATGCACACTaGAGTCCCTGGGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKAGHAH*SPWVCS
Trigger: GCTACAGACCCAGGGACTGCAGTGTGCATGCCCAGC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTCAATTAAGAAACCATaGCTTTTCTCAGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSIKKP*LFSEGK
Trigger: TTTGCCCTCTGAGAAAAGGCATGGTTTCTTAATTGA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTATGACAGGCGCTGCTaGGTTAAGGATCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGYDRRC*VKDLHN
Trigger: GTTGTGGAGATCCTTAACGCAGCAGCGCCTGTCATA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGCCAGTCTACCTTTTCTaGATCTTTTGGGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGPVYLF*IFWVAL
Trigger: CAGGGCGACCCAAAAGATGCAGAAAAGGTAGACTGG...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCAGTCTACCTTTTCTaGATCTTTTGGGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIPVYLF*IFWVAL
Trigger: CAGGGCGACCCAAAAGATGCAGAAAAGGTAGACTGG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCCAGTCTATCAAATCTaGTGCTTCAGGTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSPVYQI*CFRSGH
Trigger: ATGACCTGACCTGAAGCAGCAGATTTGATAGACTGG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTATTTCCATAGAGAGTaGTGGATGGGAGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIYFHRE*WMGGQD
Trigger: GTCCTGCCCTCCCATCCAGCACTCTCTATGGAAATA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCCCGCATCCTGGCCTCTaGTCTGCTCCGGCACGAGGC +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLPHPGL*SAPARG
Trigger: GCCTCGTGCCGGAGCAGAGCAGAGGCCAGGATGCGG...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR GCA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTTCTTGCGGGCCAACGTaGTCAGGGTCATGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKASCGPT*SGSWGR
Trigger: CCGGCCCCATGACCCTGAGCACGTTGGCCCGCAAGA...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR CCA 90 bp TCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTTGAATATTTCCGGGGTAGGTGACCGCTaGACCGTGACCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: SLYHLPGKMFSSLCLNISGVGDR*TVTKAI
Trigger: GATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCC...GGAAATATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGTGGGTGACTCTCCATaGTCTTCACCTCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGVGDSP*SSPQQS
Trigger: AGATTGCTGAGGTGAAGACCATGGAGAGTCACCCAC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAGCACCCTGGGAGCTaGAACAGTGGCATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQHPGS*NSGILL
Trigger: GAGCAGAATGCCACTGTTCCAGCTCCCAGGGTGCTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTTTTCTAGGGACTCTTaGTCCTCCATCGCGTGCATG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIFSRDS*SSIACM
Trigger: CATGCACGCGATGGAGGACCAAGAGTCCCTAGAAAA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTTTTCTAGGGACTCTTaGTCCTCCATCGCGTGCATG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGFSRDS*SSIACM
Trigger: CATGCACGCGATGGAGGACCAAGAGTCCCTAGAAAA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGCACACTGCAGTCCCTaGGTCTGTAGCACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKAHCSP*VCSTGR
Trigger: CCTTCCCGTGCTACAGACCCAGGGACTGCAGTGTGC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTGGCAAACAATGTTCTaGGATTTCAGTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAWQTMF*DFSLTE
Trigger: CTCTGTGAGACTGAAATCCCAGAACATTGTTTGCCA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGCGACAGCATCCTAAATaGAGTCACTGTGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGRQHPK*SHCGHL
Trigger: CAAGTGCCCACAGTGACTCCATTTAGGATGCTGTCG...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGAGGAACACCCAATTCTaGGAGTCTGAAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGRNTQF*ESEKAG
Trigger: GCCAGCCTTTTCAGACTCCCAGAATTGGGTGTTCCT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTGTGACCGCTGGACCGTaGCCAAAGCCATCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKAVTAGP*PKPSRR
Trigger: GCGCCTAGATGGCTTTGGTCACGGTCCAGCGGTCAC...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp CAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCTCGGTGCTGGGGGTAGGTaGCCGCTGGACCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: QSIIIYCRLENCSRSQWLGAGGR*PLDRDQ
Trigger: TTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACC...GAGCCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGTCTTACAGCCAGCCTaGTGTTGTCTTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGVLQPA*CCLLGG
Trigger: TCCGCCCAGAAGACAACATCAGGCTGGCTGTAAGAC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTGTCAACCCACATTGCCTGCACAGATACAGGTTTGAATATGTGAACTCTGTTGTCTTACAGCCAGCCTaGTGTTGTCTTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: PVNPHCLHRYRFEYVNSVVLQPA*CCLLGG
Trigger: TCCGCCCAGAAGACAACATCAGGCTGGCTGTAAGAC...AACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGAATAACTCACCCAAGTaGGAAATAGGCTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGNNSPK*EIGCLG
Trigger: ACCCAGGCAGCCTATTTCTCACTTGGGTGAGTTATT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCAATCACGGTGGAGGCTaGGCGACTCACCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSNHGGG*ATHPHF
Trigger: AAAATGGGGGTGAGTCGCTCAGCCTCCACCGTGATT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACTGTGTTCCAGTATCTaGCCCTGGGCCCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLLCSSI*PWALLR
Trigger: CCTCAGGAGGGCCCAGGGTCAGATACTGGAACACAG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACATCGCGTGCATGCCTaGGTCTGTTCTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGHRVHA*VCSEER
Trigger: CCTTTCCTCAGAACAGACTCAGGCATGCACGCGATG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGAAGCAGGTGGCAGCTaGCTGAAAAACAGCAATTTG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIEAGGS*LKNSNL
Trigger: CAAATTGCTGTTTTTCAGTCAGCTGCCACCTGCTTC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCCAAACTCTGGCCTCTaGCATCATGCTGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIPNSGL*HHADSL
Trigger: CAGACTGTCAGCATGATGTCAGAGGCCAGAGTTTGG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGAGTACCTCAGAGCCTaGGGCACTGAGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGEYLRA*GTEIFR
Trigger: CCTGAAGATCTCAGTGCCTCAGGCTCTGAGGTACTC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCAACATTGCTTGGAGATaGTGTTGGAGATCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPINIAWR*CWRSPA
Trigger: TGCAGGCGATCTCCAACAGCATCTCCAAGCAATGTT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACATGTCTGCTTTCAGTaGATCTGTCTCCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQHVCFQ*ICLQIF
Trigger: GAAGATTTGGAGACAGATGCACTGAAAGCAGACATG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTTCAGGACTCCTTCCTaGTGTGTTCCAGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIFRTPS*CVPVSD
Trigger: GTCAGATACTGGAACACAGCAGGAAGGAGTCCTGAA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCACTGACAAAAGGTGCTaGTGTCTCCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFITDKRC*CLQGCG
Trigger: TCCACAGCCCTGGAGACAGCAGCACCTTTTGTCAGT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTCTGTAGTGCTGCTCTaGTCTGTGAAGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSSVVLL*SVKPSR
Trigger: CCTGGAGGGCTTCACAGAGCAGAGCAGCACTACAGA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCAATTCTTTGGCATACTaGACAAGGGGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPINSLAY*TRGLST
Trigger: AGTGGAGAGGCCCCTTGTGCAGTATGCCAAAGAATT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATCCTTGACAGTTCACTaGGCACCTCCCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGSLTVH*APPLDT
Trigger: AGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGTCTATCAAATCTGCTaGTTCAGGTCAGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSVYQIC*FRSGHE
Trigger: TTCATGACCTGACCTGAAGCAGCAGATTTGATAGAC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CTACAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGGTGACGGAGCCGGGATaGGGAAAGGGGTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: LQSIIIYCRLENCSRSQWVTEPG*GKGCGV
Trigger: CACCCCGCACCCCTTTCCCCATCCCGGCTCCGTCAC...CCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590153.1
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGGGGTAGGTGACCGCTaGACCGTGACCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGGVGDR*TVTKAI
Trigger: GATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGCTTGGAGATGCTGTTaGAGATCGCCTGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIAWRCC*RSPACL
Trigger: CAAGCATGCAGGCGATCTCCAACAGCATCTCCAAGC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGCAAAACTAAGCCCATaGTACAAGTGCTACTGTCAT +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQAKLSP*YKCYCH
Trigger: ATGACAGTAGCACTTGTACCATGGGCTTAGTTTTGC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGAGTAGTTATGCGCTCTaGCGACTTCACAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWSSYAL*RLHKPC
Trigger: ACAAGGCTTGTGAAGTCGCCAGAGCGCATAACTACT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGCCCAGGTTTGCAGATaGGTTCGTGGTGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSAQVCR*VRGGLR
Trigger: TCTCAGACCACCACGAACCCATCTGCAAACCTGGGC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGCTGAATTAAGGCTTTaGATGCATGGCAATTGTCAA +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAAELRL*MHGNCQ
Trigger: TTGACAATTGCCATGCATCCAAAGCCTTAATTCAGC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTCCTCCATCCTTGAATaGGAAAAAGATCGTGACCGG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGSSILE*EKDRDR
Trigger: CCGGTCACGATCTTTTTCCCATTCAAGGATGGAGGA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAATTCTTCTTTGGTGTATaGCATGGGTTGGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQFFFGV*HGLGKM
Trigger: CATCTTACCCAACCCATGCCATACACCAAAGAAGAA...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCTCCAGGTTTGTTCTCTaGAGTCTGGGCCCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFISRFVL*SLGPLK
Trigger: CTTGAGAGGGCCCAGACTCCAGAGAACAAACCTGGA...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGGGTGCAGAGAAACCTaGTTGGGGTCCAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKGCRET*LGSRVL
Trigger: CAGGACTCTGGACCCCAACCAGGTTTCTCTGCACCC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGCACCTCACTGCCACTaGAGAGAGGGCTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGAPHCH*REGSPD
Trigger: GTCAGGAGAGCCCTCTCTCCAGTGGCAGTGAGGTGC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATTGGTGAGCCCTGCCTaGAAAACCACTCGAGACTCG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGLVSPA*KTTRDS
Trigger: CGAGTCTCGAGTGGTTTTCCAGGCAGGGCTCACCAA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGCGCCTCATTTGGGATaGTTTGGTGAGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKAPHLG*FGEPCL
Trigger: CAGGCAGGGCTCACCAAACCATCCCAAATGAGGCGC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTCGATGCCTCAGGTCTaGAAACCAAACCATCATCAC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGSMPQV*KPNHHH
Trigger: GTGATGATGGTTTGGTTTCCAGACCTGAGGCATCGA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTGTAACGATACACTCTaGAACACCGGAAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGCNDTL*NTGRPS
Trigger: AGAGGGTCTTCCGGTGTTCCAGAGTGTATCGTTACA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGTCCAACCTGCTTCCTaGCAGGGATGTCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKVQPAS*QGCQTQ
Trigger: CTGGGTCTGACATCCCTGCCAGGAAGCAGGTTGGAC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAACTGCGCACCTCCCCTaGACACTGCTCAGCTATGTA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGTAHLP*TLLSYV
Trigger: TACATAGCTGAGCAGTGTCCAGGGGAGGTGCGCAGT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGAGTTCTGTATGCTCCTaGGGCTTTTACCCCATACAC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGSSVCS*GFYPIH
Trigger: GTGTATGGGGTAAAAGCCCCAGGAGCATACAGAACT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCCACAACTCCGCATCCTaGCCTCTGCTCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TKIMQNDKAYWQITLQKGHNSAS*PLLCSG
Trigger: GCCGGAGCAGAGCAGAGGCCAGGATGCGGAGTTGTG...GCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324677.12
3UTR CAA 72 bp TATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTCCTaGACAGTTCACTGCGCACCTCCCCTGGACACTGCT +
Preference number: 4 (lower is better)
Translates to: YKSLKRRQSGKS*TVHCAPPLDTA
Trigger: AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCTTCTCTTCAGACTTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCCTGGATCAATATAGGTATCAATTCAGAAAATTCACACCAGATTGGGGAGTGACCGCTGGACCGTaGCCAAAGCCATCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LTLDQYRYQFRKFTPDWGVTAGP*PKPSRR
Trigger: GCGCCTAGATGGCTTTGGTCACGGTCCAGCGGTCAC...TCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTGATCCAGGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS-3UTR TCA 90 bp ATTCTCAAATCACAAAATCTTAGATTAGAAATAGTCTTAGAAGTCCCCCACTGCGGTGCTGGGGGTAGGTaGCCGCTGGACCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: ILKSQNLRLEIVLEVPHCGAGGR*PLDRDQ
Trigger: TTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACC...GCAGTGGGGGACTTCTAAGACTATTTCTAATCTAAGATTTTGTGATTTGAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR TCA 90 bp CTACAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGGGTGCTGGGGGTAGGTaGCCGCTGGACCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: LQSIIIYCRLENCSRSQWGAGGR*PLDRDQ
Trigger: TTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACC...CCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTAGGATTGATCTGAGTTaGTATGGCTCTCATAATAAC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTARIDLS*YGSHNN
Trigger: GTTATTATGAGAGCCATATCAACTCAGATCAATCCT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTAATCCTTCTGCATCATaGTCTCCCTTAATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTANPSAS*SPLIWF
Trigger: AAACCAAATTAAGGGAGATCATGATGCAGAAGGATT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCTTCCAGTTGTCTCATaGAGCTTGGGTTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLPVVS*SLGWAW
Trigger: CCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGCCAGCAAGATCCCCTaGTACTCTTCCAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSASKIP*YSSSCL
Trigger: GAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTAGGTCACTATCTGAATaGGATCTCCATAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTARSLSE*DLHSLL
Trigger: TAACAAACTATGGAGATCTCATTCAGATAGTGACCT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGTCAAGAGGAAATTTTaGTTCATTCAGACAACACCC +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSVKRKF*FIQTTP
Trigger: GGGTGTTGTCTGAATGAATCAAAATTTCCTCTTGAC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGGGACATGTCCAGGCTaGATTAAGGCTTTGGATGCA +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIGTCPG*IKALDA
Trigger: TGCATCCAAAGCCTTAATTCAGCCTGGACATGTCCC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGGCTACTTCTACCACTaGCAGTCGACAGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIGYFYH*QSTALI
Trigger: AATGAGAGCTGTCGACTGTCAGTGGTAGAAGTAGCC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCATCTGCCCAACTCCTTaGCTGATGGACTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIICPTP*LMDSIS
Trigger: TGAAATTGAGTCCATCAGTCAAGGAGTTGGGCAGAT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTGTGGGTATATTCAATaGTTTCTACCCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSCGYIQ*FLPSWE
Trigger: TTCCCAAGAGGGTAGAAATCATTGAATATACCCACA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGTGTGCAGAGCACAGTaGCAGATTTTTCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGVCRAQ*QIFPCS
Trigger: TGAACATGGAAAAATCTGTCACTGTGCTCTGCACAC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCAATGGGTTGTATGACTaGCAAAAGGTGCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPINGLYD*QKVLLS
Trigger: AGACAGCAGCACCTTTTGTCAGTCATACAACCCATT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGAATGGGTTGTATGACTaGCAAAAGGTGCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWNGLYD*QKVLLS
Trigger: AGACAGCAGCACCTTTTGTCAGTCATACAACCCATT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTGAAGCCCTCCAGGTaGACCATAGTCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVKPSR*TIVWGC
Trigger: GCATCCCCAGACTATGGTTCACCTGGAGGGCTTCAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATGCTGCTCTGCTCTGTaGAGCCCTCCAGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLCCSAL*SPPGEP
Trigger: TGGTTCACCTGGAGGGCTTCACAGAGCAGAGCAGCA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGAGAGAGGGCTCTCCTaGCTTTCTTCCCAGCTAACC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKERGLS*LSSQLT
Trigger: GGTTAGCTGGGAAGAAAGTCAGGAGAGCCCTCTCTC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTTTGGCGAGAGAAGCTaGGCGCCTCATTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKFGERS*APHLGW
Trigger: CCATCCCAAATGAGGCGCTCAGCTTCTCTCGCCAAA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCCAATTCTGGGAGTCTaGAAAGGCTGGCACAAACTC +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIPILGV*KGWHKL
Trigger: GAGTTTGTGCCAGCCTTTTCAGACTCCCAGAATTGG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAGTCTGGAAAGTCCTTaGCAGTTCACTGCGCACCTC +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGSLESP*QFTAHL
Trigger: GAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGAAAGGCAACTAAAATaGGGAGAGATGAATATTACG +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAERQLK*GEMNIT
Trigger: CGTAATATTCATCTCTCCTCATTTTAGTTGCCTTTC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTGGCGTTCTGCGAGATaGCCGCGTTGGCGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TKIMQNDKAYWQITLQKGWRSAR*PRWRRS
Trigger: ACTTCTCCGCCAACGCGGTCATCTCGCAGAACGCCA...GCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTAAGTTGCACACCATTTaGATTTCCAACTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAKLHTI*ISNSVL
Trigger: AAGAACAGAGTTGGAAATGCAAATGGTGTGCAACTT...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCGCCAGGAGATCCGTTaGCTCTTCATCATATACCCG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSRQEIR*LFIIYP
Trigger: CGGGTATATGATGAAGAGGCAACGGATCTCCTGGCG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCATGCCGCTGTTTGCTTaGCAGCAAGATCCCCTGATA +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIMPLFA*QQDPLI
Trigger: TATCAGGGGATCTTGCTGGCAAGCAAACAGCGGCAT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGTGGACATTCATGTCTaGTTTCAGTGCATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWVDIHV*FQCICL
Trigger: GAGACAGATGCACTGAAAGCAGACATGAATGTCCAC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGGCAGCCTTCTGGGTTaGACATCCCTGAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKGSLLG*TSLSLW
Trigger: CCAAAGACTCAGGGATGTGCAACCCAGAAGGCTGCC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACTGTGGACAGGCTGCTaGCTCTGTCTTCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGLWTGC*LCLQGY
Trigger: GTAGCCCTGAAGACAGAGGCAGCAGCCTGTCCACAG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAACTGACAAAAGGTGCTaGTGTCTCCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGTDKRC*CLQGCG
Trigger: TCCACAGCCCTGGAGACAGCAGCACCTTTTGTCAGT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATATATGGCACCTCACTaGCACTGGAGAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGYMAPH*HWREGS
Trigger: AGAGCCCTCTCTCCAGTGGCAGTGAGGTGCCATATA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTTGTATTTTCCTCAGTaGTGTGATAAGCCAAAAACC +
Preference number: 4 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTALYFPQ*CDKPKT
Trigger: GGTTTTTGGCTTATCACAGCACTGAGGAAAATACAA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGATCTTTTGGGTCGCCCTaGCATCTGCCCCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGSFGSP*HLPPPN
Trigger: GTTTGGTGGGGGCAGATGGCAGGGCGACCCAAAAGA...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGGTTTCTGTCCAACCTaGTTCCTGGCAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGGFCPT*FLAGMS
Trigger: TGACATCCCTGCCAGGAAGCAGGTTGGACAGAAACC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTATTGGTGGTGGAACTaGTTCAAGAAGGCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWYWWWN*FKKAGY
Trigger: ATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGTTACCACAAGTGGATaGCACTCTCTTAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGVTTSG*HSLNFQ
Trigger: CTGGAAGTTAAGAGAGTGGCATCCACTTGTGGTAAC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCGGGGCCGGCTCAAAGTaGACAACTCCGCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLGAGSK*TTPHPG
Trigger: GCCAGGATGCGGAGTTGTGCACTTTGAGCCGGCCCC...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR GCA 90 bp CAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCTCAATGAGCGCTCCCAGTaGGCAGGCGCCACCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QSIIIYCRLENCSRSQWLNERSQ*AGATCQ
Trigger: CTGACAGGTGGCGCCTGCGCACTGGGAGCGCTCATT...GAGCCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS-3UTR CCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAGGGGTAGGTGACCGCTaGACCGTGACCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRGVGDR*TVTKAI
Trigger: GATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCC...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CCA 90 bp ACCCTGGATCAATATAGGTATCAATTCAGAAAATTCACACCAGATTGGGGATTGGGGGTAGGTGACCGCTaGACCGTGACCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: TLDQYRYQFRKFTPDWGLGVGDR*TVTKAI
Trigger: GATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCC...CAATCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTGATCCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGTAAGTCCTCTAAGTTaGAGGCATTCCATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGVSPLS*RHSILS
Trigger: GCTCAGAATGGAATGCCTCCAACTTAGAGGACTTAC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAAAGACAGGAGGTATaGGTGGGTGACTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQRQEV*VGDSPW
Trigger: CCATGGAGAGTCACCCACCCATACCTCCTGTCTTTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGAGTCTGGAAACTTGTTaGCCATTTCTGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWSLETC*PFLGHV
Trigger: GACATGTCCCAGAAATGGCCAACAAGTTTCCAGACT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTCTGGCAACTGGGTTaGGGGCTTGGTGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVWQLG*GLGDSG
Trigger: TCCTGAGTCACCAAGCCCCCAACCCAGTTGCCAGAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCAAAGAGCTGCTTCTCTaGTCATCAGCTGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIKELLL*SSAVTL
Trigger: CAAAGTGACAGCTGATGACCAGAGAAGCAGCTCTTT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGATTCTTCTGATGCATaGGGAGTATTACTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSDSSDA*GVLLKE
Trigger: CTCTTTGAGTAATACTCCCCATGCATCAGAAGAATC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTTGTTCTCTGGAGTCTaGGCCCTCTCAAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKLFSGV*ALSRSS
Trigger: GCTGCTCCTTGAGAGGGCCCAGACTCCAGAGAACAA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTTGTTCCCCCTCAGCTaGTTCCCCTTCTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLFPLS*FPFFQV
Trigger: GACTTGGAAGAAGGGGAACCAGCTGAGGGGGAACAA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTGGGAGCTGGAACAGTaGCATTCTGCTCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSWELEQ*HSAQNG
Trigger: CCCATTCTGAGCAGAATGCCACTGTTCCAGCTCCCA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGCCCTCCTGAGGATCTaGCAAGTGGTCAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKALLRI*QVVKLQ
Trigger: CTGGAGTTTGACCACTTGCCAGATCCTCAGGAGGGC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCGCTCTTCTCACTGGTaGCTATTTCACTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKRSSHW*LFHSLA
Trigger: GGCCAGGGAGTGAAATAGCCACCAGTGAGAAGAGCG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACTCCGCTCTTCTCACTaGTGGCTATTTCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGLRSSH*WLFHSL
Trigger: CAGGGAGTGAAATAGCCACCAGTGAGAAGAGCGGAG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGCTGAGCGCCTCATTTaGGATGGTTTGGTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKAERLI*DGLVSP
Trigger: AGGGCTCACCAAACCATCCCAAATGAGGCGCTCAGC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGTTCTACAAAAGACTTaGTGGGCTCTGGGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIVLQKT*WALGCG
Trigger: CCCACAACCCAGAGCCCACCAAGTCTTTTGTAGAAC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAAGGGGCCTCTCCACTaGCTTGCTCTGCACAATACA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGKGPLH*LALHNT
Trigger: TGTATTGTGCAGAGCAAGCCAGTGGAGAGGCCCCTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCTCACATATACTTCCTaGCTGTGGTTGAGATACTGG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPILTYTS*LWLRYW
Trigger: CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACAATCCTCAGTAACGTaGACATCAACGAAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQQSSVT*TSTKAN
Trigger: ATTTGCTTTCGTTGATGTCCACGTTACTGAGGATTG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTCCCCATCATATTGGTaGTGGAACTGCTTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPISPSYW*WNCFKK
Trigger: CTTCTTGAAGCAGTTCCACCACCAATATGATGGGGA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCAACAGTCCAAAACTTTaGTCCTGCTTGTACCTCTTA +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSNSPKL*SCLYLL
Trigger: TAAGAGGTACAAGCAGGACCAAAGTTTTGGACTGTT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CTACAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGGTGACCGCTGGACCGTaGCCAAAGCCATCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LQSIIIYCRLENCSRSQWVTAGP*PKPSRR
Trigger: GCGCCTAGATGGCTTTGGTCACGGTCCAGCGGTCAC...CCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGATTAGAAAGCTCTCGCTaGTGCTCCTGGGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGLESSR*CSWAVT
Trigger: GGTCACAGCCCAGGAGCATCAGCGAGAGCTTTCTAA...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GAAAGGCTGCTCCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTTGTTCCAAAGGGCAGCACCTTTaGCAGTTAGAAAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: ERLLQFILPPIVHHSVCSKGQHL*QLESSR
Trigger: GCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTT...GGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGGAGCAGCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp CACAGATACAGGTTTGAATATGTGAACTCTGTTATCCGTCGATACACTGAACCCTGTTCCGTCTGTGGCTaGTTCTTGGTGTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: HRYRFEYVNSVIRRYTEPCSVCG*FLVWMS
Trigger: GCTCATCCACACCAAGAATCAGCCACAGACGGAACA...GGGTTCAGTGTATCGACGGATAACAGAGTTCACATATTCAAACCTGTATCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACCATCACCATCCAAATaGATTAGCGTGTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGPSPSK*ISVSLQ
Trigger: CTGGAGCGACACGCTAATTCATTTGGATGGTGATGG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGGTTTGAATATGTGAACTCTGTTATCCGTCGATACACTGAACCCACCATCACCCCATCACCATCCAAATaGATTAGCGTGTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RFEYVNSVIRRYTEPTITPSPSK*ISVSLQ
Trigger: CTGGAGCGACACGCTAATTCATTTGGATGGTGATGG...GGTGATGGTGGGTTCAGTGTATCGACGGATAACAGAGTTCACATATTCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTATCCGTCGATACACTaGACCCACCATCACCATCCA +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSYPSIH*THHHHP
Trigger: TGGATGGTGATGGTGGGTTCAGTGTATCGACGGATA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTGTCAACCCACATTGCCTGCACAGATACAGGTTTGAATATGTGAACTCTGTTTATCCGTCGATACACTaGACCCACCATCACCATCCA +
Preference number: 4 (lower is better)
Translates to: PVNPHCLHRYRFEYVNSVYPSIH*THHHHP
Trigger: TGGATGGTGATGGTGGGTTCAGTGTATCGACGGATA...AACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGCACAGATACAGGTTTaGATATGTGAACTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQAQIQV*ICELCY
Trigger: ATAACAGAGTTCACATATTCAAACCTGTATCTGTGC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTATACCCGAATGTTATaGTACTCAAAGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWYTRML*YSKTPG
Trigger: CCCAGGAGTCTTTGAGTATCATAACATTCGGGTATA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCAGCAATCTGGTCTGCTaGGGTGGTGATATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFISNLVC*GGDILL
Trigger: AAGAAGGATATCACCACCTCAGCAGACCAGATTGCT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAGACCCTGGGCCCTCCTaGGGATCTGGCAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTDPGPS*GSGKWS
Trigger: TGACCACTTGCCAGATCCTCAGGAGGGCCCAGGGTC...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTTTGGGATGGTTTGGTaGGCCCTGCCTGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKFGMVW*ALPGKP
Trigger: TGGTTTTCCAGGCAGGGCTCACCAAACCATCCCAAA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAAGGCTGAAGCAGTTTaGGATGAGGGGATTCACAGG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGKAEAV*DEGIHR
Trigger: CCTGTGAATCCCCTCATCTCAAACTGCTTCAGCCTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCTTCAGGTCAGGTCATaGACAAAAGAAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPILQVRS*TKEKGK
Trigger: CTTTCCCTTTTCTTTTGTTCATGACCTGACCTGAAG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGAGTACCTCAGAGCCTaGGGCACTGAGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGEYLRA*GTEIFR
Trigger: CCTGAAGATCTCAGTGCCTCAGGCTCTGAGGTACTC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACCCACCATCACCATCCAAATGAATTAGCGTGTCGCTCCAGAGAGGCAAAACTAACAGTGTTTGTTCCTTaGATCCCTGTCAACCCACAT +
Preference number: 4 (lower is better)
Translates to: THHHHPNELACRSREAKLTVFVP*IPVNPH
Trigger: ATGTGGGTTGACAGGGATTCAAGGAACAAACACTGT...TAGTTTTGCCTCTCTGGAGCGACACGCTAATTCATTTGGATGGTGATGGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR GCA 90 bp TTAACCCTGGATCAATATAGGTATCAATTCAGAAAATTCACACCAGATTGGGGAAAGCCATCTAGGCGCTaGTGGGTTGTTCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LTLDQYRYQFRKFTPDWGKPSRR*WVVPGR
Trigger: CCTGCCCGGAACAACCCAGCAGCGCCTAGATGGCTT...TCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTGATCCAGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS-3UTR GCA 90 bp CAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCTCAAGCCATCTAGGCGCTaGTGGGTTGTTCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QSIIIYCRLENCSRSQWLKPSRR*WVVPGR
Trigger: CCTGCCCGGAACAACCCAGCAGCGCCTAGATGGCTT...GAGCCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTTCTCCAAATCCTTCTaGATCATGATCTCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSFSKSF*IMISLN
Trigger: ATTAAGGGAGATCATGATGCAGAAGGATTTGGAGAA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTATTACTCAAAGAGCTaGTTCTCTGGTCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIYYSKS*FSGHQL
Trigger: CAGCTGATGACCAGAGAAGCAGCTCTTTGAGTAATA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGTTCAGGCTGGGCTGTaGAGGAGTCCTCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLVQAGL*RSPHLA
Trigger: AGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAAC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGGAACAGTGGCATTCTaGTCAGAATGGGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSGTVAF*SEWDSE
Trigger: CTCACTGTCCCATTCTGAGCAGAATGCCACTGTTCC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCTTCAGGACTCCTTCCTaGTGTGTTCCAGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIFRTPS*CVPVSD
Trigger: GTCAGATACTGGAACACAGCAGGAAGGAGTCCTGAA...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAAGGGGAAGAGGGACTaGTTGTGTTTCAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGKGKRD*LCFRLL
Trigger: CAGGAGTCTGAAACACAAGCAGTCCCTCTTCCCCTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTATATGGCACCTCACTaGCACTGGAGAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKYMAPH*HWREGS
Trigger: AGAGCCCTCTCTCCAGTGGCAGTGAGGTGCCATATA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATGGTCCTCCATCGCGTaGATGCCTGAGTCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLWSSIA*MPESVL
Trigger: CAGAACAGACTCAGGCATGCACGCGATGGAGGACCA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCCACCCCTCCGAATCTaGTTCCTTCCCTCAATTAAG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSPPLRI*FLPSIK
Trigger: CTTAATTGAGGGAAGGAAGCAGATTCGGAGGGGTGG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTATGACAGGCGCTGCTaGGTTAAGGATCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSYDRRC*VKDLHN
Trigger: GTTGTGGAGATCCTTAACGCAGCAGCGCCTGTCATA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCAAAACTTTGGTCCTaGTTGTACCTCTTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIPKLWS*LYLLVC
Trigger: ACACACTAAGAGGTACAAGCAGGACCAAAGTTTTGG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGATCCTTGACAGTTCACTaGGCACCTCCCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGSLTVH*APPLDT
Trigger: AGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGA...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGTCTATCAAATCTGCTaGTTCAGGTCAGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGVYQIC*FRSGHE
Trigger: TTCATGACCTGACCTGAAGCAGCAGATTTGATAGAC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGAACACTTCTGTGACCTaGTACATCTCAGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGNTSVT*YISEAS
Trigger: AGAAGCTTCTGAGATGTAGCAGGTCACAGAAGTGTT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGATGGTTGATGGCGTTCTaGGAGATGACCGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRWLMAF*EMTALA
Trigger: CGCCAACGCGGTCATCTCGCAGAACGCCATCAACCA...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR CCA 90 bp CAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCTCGGGGTAGGTGACCGCTaGACCGTGACCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: QSIIIYCRLENCSRSQWLGVGDR*TVTKAI
Trigger: GATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCC...GAGCCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGGAGAGTCGGGCCGGTaGGACTGTACATCTTGCATT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGGESGR*DCTSCI
Trigger: AATGCAAGATGTACAGTCCCACCGGCCCGACTCTCC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGCCCAGGTTTGCAGATaGGTTCGTGGTGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLAQVCR*VRGGLR
Trigger: TCTCAGACCACCACGAACCCATCTGCAAACCTGGGC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATCTGAGATTTCAGTCTaGCAACTGGGTTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGSEISV*QLGWGL
Trigger: AAGCCCCCAACCCAGTTGCCAGACTGAAATCTCAGA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTTCTTCTTTGGTGTATaGCATGGGTTGGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWFFFGV*HGLGKM
Trigger: CATCTTACCCAACCCATGCCATACACCAAAGAAGAA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATTGTTCTCTGGAGTCTaGGCCCTCTCAAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLLFSGV*ALSRSS
Trigger: GCTGCTCCTTGAGAGGGCCCAGACTCCAGAGAACAA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACAAACTCCAGCACCCTaGGAGCTGGAACAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGQTPAP*ELEQWH
Trigger: ATGCCACTGTTCCAGCTCCCAGGGTGCTGGAGTTTG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAAGGTTGGATGGTCAGTaGGTCTGTTGTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGRLDGQ*VCCAQG
Trigger: CCCCTGAGCACAACAGACCCACTGACCATCCAACCT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACAGGGCTACTCAGGATaGAGGTTGGATGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGQGYSG*RLDGQW
Trigger: CCACTGACCATCCAACCTCCATCCTGAGTAGCCCTG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCATTCAAGTCCTGCCCTaGGGAGCAAATACTGCTGAC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSIQVLP*GANTAD
Trigger: GTCAGCAGTATTTGCTCCCCAGGGCAGGACTTGAAT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCTCGATGCCTCAGGTCTaGAAACCAAACCATCATCAC +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFISMPQV*KPNHHH
Trigger: GTGATGATGGTTTGGTTTCCAGACCTGAGGCATCGA...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGAGCCCTCTGACTTCTaGCTGACCTTTAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKEPSDF*LTFSPF
Trigger: GAATGGGCTAAAGGTCAGCCAGAAGTCAGAGGGCTC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGCAAGCCTCCTCACATTaGTTCATACCACCTAACAAA +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGQASSH*FIPPNK
Trigger: TTTGTTAGGTGGTATGAACCAATGTGAGGAGGCTTG...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTACATGGAAGAGCTCTaGAAATCCATAACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGYMEEL*KSITLS
Trigger: AGACAGGGTTATGGATTTCCAGAGCTCTTCCATGTA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCCTTCCCCATCATATTaGTGGTGGAACTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIPSPSY*WWNCFK
Trigger: CTTGAAGCAGTTCCACCACCAATATGATGGGGAAGG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGAAGAGAAGACAGTCTaGAAAGTCCTTGACAGTTCA +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIEEKTV*KVLDSS
Trigger: TGAACTGTCAAGGACTTTCCAGACTGTCTTCTCTTC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGAAAGGGCAGCACCTTTaGCAGTTAGAAAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKKGQHL*QLESSR
Trigger: GCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTGTCTTACAGCCAGCCTaGTGTTGTCTTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKAVLQPA*CCLLGG
Trigger: TCCGCCCAGAAGACAACATCAGGCTGGCTGTAAGAC...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTTGTCTACCATTAGTTaGAACCACTACCATATAGCG +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGLSTIS*NHYHIA
Trigger: CGCTATATGGTAGTGGTTTCAACTAATGGTAGACAA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGTCAAGAGGAAATTTTaGTTCATTCAGACAACACCC +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWVKRKF*FIQTTP
Trigger: GGGTGTTGTCTGAATGAATCAAAATTTCCTCTTGAC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACTTACGAGTGGACAATaGGGTACATGTTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLLTSGQ*GTCWGS
Trigger: GCTGCCCCAACATGTACCTCATTGTCCACTCGTAAG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTGTGGGTATATTCAATaGTTTCTACCCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGCGYIQ*FLPSWE
Trigger: TTCCCAAGAGGGTAGAAATCATTGAATATACCCACA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACGGCTGGATGAAGGCTaGGAGCCCTCTGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTRLDEG*EPSDFW
Trigger: CCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAATTCAAGGAGACTACTaGGCAACAGCACAGGGTACA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGIQGDY*ATAQGT
Trigger: TGTACCCTGTGCTGTTGCTCAGTAGTCTCCTTGAAT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGGTTTCCCTTTCTACTaGCCAGGTTCAGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGGFPFY*PGSAQV
Trigger: AACTTGAGCTGAACCTGGTCAGTAGAAAGGGAAACC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATCTGTCTGGGGCCTGTaGGCAGAGTACCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTSVWGL*AEYLRA
Trigger: GGCTCTGAGGTACTCTGCTCACAGGCCCCAGACAGA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGAGATCACTTCAGAACTaGAATCCTCAGATGAAACAG +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWRSLQN*NPQMKQ
Trigger: CTGTTTCATCTGAGGATTTCAGTTCTGAAGTGATCT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAAAGCCATCTAGGCGCTaGTGGGTTGTTCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTKPSRR*WVVPGR
Trigger: CCTGCCCGGAACAACCCAGCAGCGCCTAGATGGCTT...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTGGAGATCGCCTGCATaGTTGTTCCGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TKIMQNDKAYWQITLQKGWRSPA*LFRLWL
Trigger: CAGCCACAGACGGAACAAGCATGCAGGCGATCTCCA...GCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGAGCCCAGGAACACATaGTCAAATATCTGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSEPRNT*SNICVG
Trigger: CCCTACACAGATATTTGAGCATGTGTTCCTGGGCTC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACTCCATAGTTTGTTATaGCGCTGTTTGCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGLHSLL*RCLLAS
Trigger: GCTGGCAAGCAAACAGCGGCATAACAAACTATGGAG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTTCTAGCCCAGGTTTaGAGATGGGTTCGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVLAQV*RWVRGG
Trigger: ACCACCACGAACCCATCTGCAAACCTGGGCTAGAAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAGGAGTCCTCATCTTaGTCCATATGTCCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQESSS*SICPGL
Trigger: CAAACCTGGACATATGGAGCAAGATGAGGACTCCTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCTTACATATTACACCTaGCCCTTTTACAAACATTTC +
Preference number: 4 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSLTYYT*PFYKHF
Trigger: GAAATGTTTGTAAAAGGGGCAGGTGTAATATGTAAG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCTGACTTTCGATTGCTaGTTTTCAAACATGTCACTG +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWLTFDC*FSNMSL
Trigger: CAGTGACATGTTTGAAAAGCAGCAATCGAAAGTCAG...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCCTGCCATAAGTTCCTaGCCTTCCCCATCATATTGG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKPAISS*PSPSYW
Trigger: CCAATATGATGGGGAAGGGCAGGAACTTATGGCAGG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGGTTTGAATATGTGAACTCTGTTATCCGTCGATACACTGAACCCACCATCACCTGCTTGTTCCGTCTGTaGCTGATTCTTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: RFEYVNSVIRRYTEPTITCLFRL*LILGVD
Trigger: ATCCACACCAAGAATCAGCCACAGACGGAACAAGCA...GGTGATGGTGGGTTCAGTGTATCGACGGATAACAGAGTTCACATATTCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCTGATTTGCATCTTGTaGGACCATATGTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPILICIL*DHMFHK
Trigger: TTTGTGGAACATATGGTCCCACAAGATGCAAATCAG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCAGTCTGGAAACTTGTTaGCCATTTCTGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFISLETC*PFLGHV
Trigger: GACATGTCCCAGAAATGGCCAACAAGTTTCCAGACT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACATCAGCTGTCACTTTaGAAGGGGCTACTTCTACCA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGHQLSL*KGLLLP
Trigger: TGGTAGAAGTAGCCCCTTCCAAAGTGACAGCTGATG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCATCAGCTGTCACTTTaGAAGGGGCTACTTCTACCA +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSHQLSL*KGLLLP
Trigger: TGGTAGAAGTAGCCCCTTCCAAAGTGACAGCTGATG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGATGCTGTTCTTCTTTaGTGTATGGCATGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGDAVLL*CMAWVG
Trigger: CCCAACCCATGCCATACACCAAAGAAGAACAGCATC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGATGCTGTTCTTCTTTaGTGTATGGCATGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSDAVLL*CMAWVG
Trigger: CCCAACCCATGCCATACACCAAAGAAGAACAGCATC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGTTCTACAAAAGACTTaGTGGGCTCTGGGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKVLQKT*WALGCG
Trigger: CCCACAACCCAGAGCCCACCAAGTCTTTTGTAGAAC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCTACAGAAGACCACTTaGATTTCATTTGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFILQKTT*ISFGVL
Trigger: CAGGACCCCAAATGAAATCCAAGTGGTCTTCTGTAG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACCTTCCCCATCATATTaGTGGTGGAACTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGPSPSY*WWNCFK
Trigger: CTTGAAGCAGTTCCACCACCAATATGATGGGGAAGG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGTACCTCTTAGTGTGTaGGATGTCATCATCGTAAGG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIVPLSV*DVIIVR
Trigger: CCTTACGATGATGACATCCCACACACTAAGAGGTAC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AGAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTACGTGCTCAGGGTCATaGGGCCGGCTCAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: RVTRTKIMQNDKAYWQITTCSGS*GRLKVH
Trigger: GTGCACTTTGAGCCGGCCCCATGACCCTGAGCACGT...AGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR CCA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTCTCTCGCTGATGAGCTaGTTGATGGCGTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKALSLMS*LMAFCE
Trigger: CTCGCAGAACGCCATCAACCAGCTCATCAGCGAGAG...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324677.12
3UTR CAA 72 bp CCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTaGTTCCTTGAATCCCTGTCAACCCACATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PVHSSTNSTSQC*FLESLSTHIAC
Trigger: GCAGGCAATGTGGGTTGACAGGGATTCAAGGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTTAGAAAGCTCTCGCTaGTGCTCCTGGGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLLESSR*CSWAVT
Trigger: GGTCACAGCCCAGGAGCATCAGCGAGAGCTTTCTAA...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGAATAACTCACCCAAGTaGGAAATAGGCTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKNNSPK*EIGCLG
Trigger: ACCCAGGCAGCCTATTTCTCACTTGGGTGAGTTATT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGAGGATTGATCTGAGTTaGTATGGCTCTCATAATAAC +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWRIDLS*YGSHNN
Trigger: GTTATTATGAGAGCCATATCAACTCAGATCAATCCT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCTATACCCGAATGTTATaGTACTCAAAGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIYTRML*YSKTPG
Trigger: CCCAGGAGTCTTTGAGTATCATAACATTCGGGTATA...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCCCAGTGTGATTGGGTaGTGTAACTATGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSPSVIG*CNYVGI
Trigger: TATACCCACATAGTTACATCACCCAATCACACTGGG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGTGTGCAGAGCACAGTaGCAGATTTTTCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGVCRAQ*QIFPCS
Trigger: TGAACATGGAAAAATCTGTCACTGTGCTCTGCACAC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATGCTGCTCTGCTCTGTaGAGCCCTCCAGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTCCSAL*SPPGEP
Trigger: TGGTTCACCTGGAGGGCTTCACAGAGCAGAGCAGCA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATGCCTGAGTCTGTTCTaGGGAAAGGCTGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLCLSLF*GKAEAV
Trigger: AACTGCTTCAGCCTTTCCTCAGAACAGACTCAGGCA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTTTACAAGAACACACTaGCTTTCGATTGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWFTRTH*LSIAAF
Trigger: AAAAGCAGCAATCGAAAGTCAGTGTGTTCTTGTAAA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACCAATTCTGGGAGTCTaGAAAGGCTGGCACAAACTC +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLPILGV*KGWHKL
Trigger: GAGTTTGTGCCAGCCTTTTCAGACTCCCAGAATTGG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGAGATTATAAAAGTCTaGAGAGAAGACAGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGEIIKV*REDSLE
Trigger: TTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCTTCAGGTCAGGTCATaGACAAAAGAAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFILQVRS*TKEKGK
Trigger: CTTTCCCTTTTCTTTTGTTCATGACCTGACCTGAAG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTGGAGATCGCCTGCATaGTTGTTCCGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLWRSPA*LFRLWL
Trigger: CAGCCACAGACGGAACAAGCATGCAGGCGATCTCCA...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR GCA 90 bp CCTGTCAACCCACATTGCCTGCACAGATACAGGTTTGAATATGTGAACTCTGTTCCATTCCTAGGACGATaGTTTCTTCAGTGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PVNPHCLHRYRFEYVNSVPFLGR*FLQCLV
Trigger: GACAAGACACTGAAGAAAGCATCGTCCTAGGAATGG...AACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGCCATATTCCTTCATTaGATAGGCAATCACGGTGGA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGAIFLH*IGNHGG
Trigger: TCCACCGTGATTGCCTATGCAATGAAGGAATATGGC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCATGTCTGCTTTCAGTaGATCTGTCTCCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIHVCFQ*ICLQIF
Trigger: GAAGATTTGGAGACAGATGCACTGAAAGCAGACATG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACCAGCTAACCTGTTCTaGAGAGGGCTCATCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGPANLF*RGLICS
Trigger: ACTACAGATGAGCCCTCTGCAGAACAGGTTAGCTGG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGAGTCAATTCAAGTCCTaGCCTGGGGAGCAAATACTG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKSQFKS*PGEQIL
Trigger: CAGTATTTGCTCCCCAGGGCAGGACTTGAATTGACT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGACACTGACTTTCGATTaGTGCTTTTCAAACATGTCA +
Preference number: 4 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWTLTFD*CFSNMS
Trigger: TGACATGTTTGAAAAGCAGCAATCGAAAGTCAGTGT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCACACTGACTTTCGATTaGTGCTTTTCAAACATGTCA +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPITLTFD*CFSNMS
Trigger: TGACATGTTTGAAAAGCAGCAATCGAAAGTCAGTGT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCAACACTTCTGTGACCTaGTACATCTCAGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFINTSVT*YISEAS
Trigger: AGAAGCTTCTGAGATGTAGCAGGTCACAGAAGTGTT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCGCTTGGAGATGCTGTTaGAGATCGCCTGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: TKIMQNDKAYWQITLQKGAWRCC*RSPACL
Trigger: CAAGCATGCAGGCGATCTCCAACAGCATCTCCAAGC...GCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGTAAGTCCTCTAAGTTaGAGGCATTCCATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSVSPLS*RHSILS
Trigger: GCTCAGAATGGAATGCCTCCAACTTAGAGGACTTAC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGAGCTTGGGTTGGGCTTaGTTACCGTTCGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKSLGWA*LPFVFL
Trigger: AAGAAAGACGAACGGTAACCAAGCCCAACCCAAGCT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACAGATGGGTTCGTGGTaGTCTGAGAGGTCACTATCT +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLQMGSW*SERSLS
Trigger: AGATAGTGACCTCTCAGACCACCACGAACCCATCTG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTGGGTGACTCTCCATaGTCTTCACCTCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVGDSP*SSPQQS
Trigger: AGATTGCTGAGGTGAAGACCATGGAGAGTCACCCAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGTGTATGGCATGGGTTaGGTAAGATGTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSVYGMG*VRCLLS
Trigger: TGAAAGGAGACATCTTACCCAACCCATGCCATACAC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGTGTATGGCATGGGTTaGGTAAGATGTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGVYGMG*VRCLLS
Trigger: TGAAAGGAGACATCTTACCCAACCCATGCCATACAC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATGTGTTTCAGACTCCTaGTATGGAATCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGCVSDS*YGITVL
Trigger: GAGGACTGTGATTCCATACCAGGAGTCTGAAACACA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGCAGAGAAACCTGGTTaGGGTCCAGAGTCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGAEKPG*GPESCL
Trigger: TAAACAGGACTCTGGACCCCAACCAGGTTTCTCTGC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACCAAGTAACCTAATTTaGCGAGAGAAGCTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGPSNLI*REKLSA
Trigger: GGCGCTCAGCTTCTCTCGCCAAATTAGGTTACTTGG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGACTGTTGTTTTCAGTTaGGAGGACACTGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKTVVFS*EDTAEH
Trigger: GTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGCAGGAGCTGGTGATTaGAAGTCTCCATTTAAACAA +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIAGAGD*KSPFKQ
Trigger: TTGTTTAAATGGAGACTTCCAATCACCAGCTCCTGC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAGTCCAACCTGCTTCCTaGCAGGGATGTCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTVQPAS*QGCQTQ
Trigger: CTGGGTCTGACATCCCTGCCAGGAAGCAGGTTGGAC...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGCAGGGTATTCTACATaGAAGAGCTCTGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGAGYST*KSSGNP
Trigger: TGGATTTCCAGAGCTCTTCCATGTAGAATACCCTGC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCCATCATATTGGTGGTaGAACTGCTTCAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSPSYWW*NCFKKA
Trigger: TGCCTTCTTGAAGCAGTTCCACCACCAATATGATGG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCTGTCCTTGGAGCTCTaGGTAGTTTGCAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLSLEL*VVCKMR
Trigger: TCTCATTTTGCAAACTACCCAGAGCTCCAAGGACAG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
3UTR CAA 72 bp TACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTaGAATATTTCCAGCAATGTGCACTCACTATTTTGC +
Preference number: 4 (lower is better)
Translates to: YHLPGKMFSSLC*NISSNVHSLFC
Trigger: GCAAAATAGTGAGTGCACATTGCTGGAAATATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR TCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAAGGGCAGCACCTTTaGCAGTTAGAAAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRKGQHL*QLESSR
Trigger: GCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTT...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR TCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTGTTCCGTCTGTGGCTaGTTCTTGGTGTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLCSVCG*FLVWMS
Trigger: GCTCATCCACACCAAGAATCAGCCACAGACGGAACA...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR TCA 90 bp ACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCCCATCACCATCCAAATaGATTAGCGTGTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TKIMQNDKAYWQITLQKGPSPSK*ISVSLQ
Trigger: CTGGAGCGACACGCTAATTCATTTGGATGGTGATGG...GCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR TCA 90 bp TCACAGTGTTTGTTCCTTGAATCCCTGTCAACCCACATTGCCTGCACAGATACAACAGGTTTGAATATGTaGACTCTGTTATCCGTCGAT +
Preference number: 4 (lower is better)
Translates to: SQCLFLESLSTHIACTDTTGLNM*TLLSVD
Trigger: ATCGACGGATAACAGAGTTCACATATTCAAACCTGT...TGTATCTGTGCAGGCAATGTGGGTTGACAGGGATTCAAGGAACAAACACTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATCATTGACTGAGGATTaGTCTGAGTTGATATGGCTC +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGSLTED*SELIWL
Trigger: GAGCCATATCAACTCAGATCAATCCTCAGTCAATGA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAGTAAATGGGTTGTATaGCTGACAAAAGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGSKWVV*LTKGAA
Trigger: AGCAGCACCTTTTGTCAGTCATACAACCCATTTACT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGAAGCAGGTGGCAGCTaGCTGAAAAACAGCAATTTG +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGEAGGS*LKNSNL
Trigger: CAAATTGCTGTTTTTCAGTCAGCTGCCACCTGCTTC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAATTCAAGGAGACTACTaGGCAACAGCACAGGGTACA +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLIQGDY*ATAQGT
Trigger: TGTACCCTGTGCTGTTGCTCAGTAGTCTCCTTGAAT...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATCTCATAGGAAGCTTTaGGTTTACCCAACAGCATCT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGSHRKL*VYPTAS
Trigger: AGATGCTGTTGGGTAAACTCAAAGCTTCCTATGAGA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGGAATTCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTTGAATTCTCCAGCCTTTGCTTaGATATTTCCAGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: RNSLYHLPGKMFSSLCLNSPAFA*IFPAMC
Trigger: GCACATTGCTGGAAATATTCAAGCAAAGGCTGGAGA...ATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCCATTCCTAGGACGATaGTTTCTTCAGTGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKPFLGR*FLQCLV
Trigger: GACAAGACACTGAAGAAAGCATCGTCCTAGGAATGG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACTCCATAGTTTGTTATaGCGCTGTTTGCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLLHSLL*RCLLAS
Trigger: GCTGGCAAGCAAACAGCGGCATAACAAACTATGGAG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTATTACTCAAAGAGCTaGTTCTCTGGTCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSYYSKS*FSGHQL
Trigger: CAGCTGATGACCAGAGAAGCAGCTCTTTGAGTAATA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGGAGCAGCTCATGGATaGTGTTCTTCTTTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKGAAHG*CSSLVY
Trigger: ATACACCAAAGAAGAACAGCATCCATGAGCTGCTCC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATGGTCCTCCATCGCGTaGATGCCTGAGTCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTWSSIA*MPESVL
Trigger: CAGAACAGACTCAGGCATGCACGCGATGGAGGACCA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGCAAAACTAAGCCCATaGTACAAGTGCTACTGTCAT +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSAKLSP*YKCYCH
Trigger: ATGACAGTAGCACTTGTACCATGGGCTTAGTTTTGC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GAAAGGCTGCTCCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTTGTTCCGCAAAACTAAGCCCATaGTACAAGTGCTACTGTCAT +
Preference number: 4 (lower is better)
Translates to: ERLLQFILPPIVHHSVCSAKLSP*YKCYCH
Trigger: ATGACAGTAGCACTTGTACCATGGGCTTAGTTTTGC...GGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGGAGCAGCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAAGCTTGGGTTGGGCTTaGTTACCGTTCGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGSLGWA*LPFVFL
Trigger: AAGAAAGACGAACGGTAACCAAGCCCAACCCAAGCT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACTTGTTGGCCATTTCTaGGACATGTCCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGLVGHF*DMSRLN
Trigger: ATTCAGCCTGGACATGTCCCAGAAATGGCCAACAAG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTCCATAGGCAGTAGGTaGACATTCATGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKSIGSR*TFMSAF
Trigger: GAAAGCAGACATGAATGTCCACCTACTGCCTATGGA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATCCTCCATCCTTGAATaGGAAAAAGATCGTGACCGG +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLSSILE*EKDRDR
Trigger: CCGGTCACGATCTTTTTCCCATTCAAGGATGGAGGA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACAAACTCCAGCACCCTaGGAGCTGGAACAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTQTPAP*ELEQWH
Trigger: ATGCCACTGTTCCAGCTCCCAGGGTGCTGGAGTTTG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACAGGGCTACTCAGGATaGAGGTTGGATGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTQGYSG*RLDGQW
Trigger: CCACTGACCATCCAACCTCCATCCTGAGTAGCCCTG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGCAGGTAATCCAAACTaGCAGACAGTAAATGGGTTG +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKAGNPN*QTVNGL
Trigger: CAACCCATTTACTGTCTGCCAGTTTGGATTACCTGC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAGCTGAGCGCCTCATTTaGGATGGTTTGGTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTAERLI*DGLVSP
Trigger: AGGGCTCACCAAACCATCCCAAATGAGGCGCTCAGC...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAACTGTTGTTTTCAGTTaGGAGGACACTGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGTVVFS*EDTAEH
Trigger: GTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGCAGGAGCTGGTGATTaGAAGTCTCCATTTAAACAA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGAGAGD*KSPFKQ
Trigger: TTGTTTAAATGGAGACTTCCAATCACCAGCTCCTGC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACAAGCCTCCTCACATTaGTTCATACCACCTAACAAA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGQASSH*FIPPNK
Trigger: TTTGTTAGGTGGTATGAACCAATGTGAGGAGGCTTG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGCAGGGTATTCTACATaGAAGAGCTCTGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKAGYST*KSSGNP
Trigger: TGGATTTCCAGAGCTCTTCCATGTAGAATACCCTGC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCATAAGTGAGAGTCTATaGTGGTTTAAAAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIISESL*WFKKRE
Trigger: CTCTCTCTTTTTAAACCACCATAGACTCTCACTTAT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCCTGGATCAATATAGGTATCAATTCAGAAAATTCACACCAGATTGGGGACAGATTGGGGATTGGTaGGAGAATGGGGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: LTLDQYRYQFRKFTPDWGQIGDW*ENGEEM
Trigger: CATCTCCTCCCCATTCTCCCACCAATCCCCAATCTG...TCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTGATCCAGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000582084.1
3UTR CAA 72 bp ATTCTTCCACCAATAGTACATCACAGTGTTTGTTCCTaGAATCCCTGTCAACCCACATTGCCTGCACAGATA +
Preference number: 4 (lower is better)
Translates to: ILPPIVHHSVCS*NPCQPTLPAQI
Trigger: TATCTGTGCAGGCAATGTGGGTTGACAGGGATTCAAGGAACAAACACTGTGATGTACTATTGGTGGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCAATGCGATCTGTACTaGAATCTGAGATTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSQCDLY*NLRFQS
Trigger: AGACTGAAATCTCAGATTTCAGTACAGATCGCATTG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACCCAGTGTGATTGGGTaGTGTAACTATGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGPSVIG*CNYVGI
Trigger: TATACCCACATAGTTACATCACCCAATCACACTGGG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCTTTACAAGAACACACTaGCTTTCGATTGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIFTRTH*LSIAAF
Trigger: AAAAGCAGCAATCGAAAGTCAGTGTGTTCTTGTAAA...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACTTGGCATGGTTGAATaGCAGATATTCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGLGMVE*QIFCRR
Trigger: TCTTCTACAGAATATCTGTCATTCAACCATGCCAAG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCAGATCACTTCAGAACTaGAATCCTCAGATGAAACAG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSRSLQN*NPQMKQ
Trigger: CTGTTTCATCTGAGGATTTCAGTTCTGAAGTGATCT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAACATTGCTTGGAGATaGTGTTGGAGATCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRNIAWR*CWRSPA
Trigger: TGCAGGCGATCTCCAACAGCATCTCCAAGCAATGTT...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGCAGACCACATTGCCTaGACAGATACAGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGADHIA*TDTGLN
Trigger: ATTCAAACCTGTATCTGTGCAGGCAATGTGGTCTGC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGCAGACCACATTGCCTaGACAGATACAGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLADHIA*TDTGLN
Trigger: ATTCAAACCTGTATCTGTGCAGGCAATGTGGTCTGC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATGGGACTGTACATCTTaGATTGCATTCCATTCATTG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGWDCTS*IAFHSL
Trigger: CAATGAATGGAATGCAATGCAAGATGTACAGTCCCA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTGGGACTGTACATCTTaGATTGCATTCCATTCATTG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSWDCTS*IAFHSL
Trigger: CAATGAATGGAATGCAATGCAAGATGTACAGTCCCA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTGGACATTCATGTCTaGTTTCAGTGCATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVDIHV*FQCICL
Trigger: GAGACAGATGCACTGAAAGCAGACATGAATGTCCAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACAACGAAAGCAAATCTaGAAGCCTCTTCAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGQRKQI*KPLQFQ
Trigger: TTGAAACTGAAGAGGCTTGCAGATTTGCTTTCGTTG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGTTACCACAAGTGGATaGCACTCTCTTAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLVTTSG*HSLNFQ
Trigger: CTGGAAGTTAAGAGAGTGGCATCCACTTGTGGTAAC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGACCTGTCAACCCACATTaGCTGCACAGATACAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRPVNPH*LHRYRF
Trigger: AAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGG...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CCA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTTGCTTGTTCCGTCTGTaGCTGATTCTTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKACLFRL*LILGVD
Trigger: ATCCACACCAAGAATCAGCCACAGACGGAACAAGCA...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCATACTCAAAGACTCCTaGGAAGAAGTTATCTATCTC +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIILKDS*EEVIYL
Trigger: GAGATAGATAACTTCTTCCCAGGAGTCTTTGAGTAT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAAAAGAGCTGCTTCTCTaGTCATCAGCTGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLKELLL*SSAVTL
Trigger: CAAAGTGACAGCTGATGACCAGAGAAGCAGCTCTTT...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGATTCTTCTGATGCATaGGGAGTATTACTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSDSSDA*GVLLKE
Trigger: CTCTTTGAGTAATACTCCCCATGCATCAGAAGAATC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATGTGTTTCAGACTCCTaGTATGGAATCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLCVSDS*YGITVL
Trigger: GAGGACTGTGATTCCATACCAGGAGTCTGAAACACA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACTGGGAGTCCTTATATaGCACCTCACTGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTLGVLI*HLTATG
Trigger: TCCAGTGGCAGTGAGGTGCCATATAAGGACTCCCAG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCTGTGGTTGAGATACTaGCAAACAATGTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKLWLRY*QTMFWD
Trigger: ATCCCAGAACATTGTTTGCCAGTATCTCAACCACAG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTATACTTCCTGGCTGTaGTTGAGATACTGGCAAACA +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKYTSWL*LRYWQT
Trigger: TGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACTCACATATACTTCCTaGCTGTGGTTGAGATACTGG +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLLTYTS*LWLRYW
Trigger: CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGACGCTTTTAGCAAGTaGTTTCTGTCCAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLDAFSK*FLSNLL
Trigger: AAGCAGGTTGGACAGAAACCACTTGCTAAAAGCGTC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTACATGGAAGAGCTCTaGAAATCCATAACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKYMEEL*KSITLS
Trigger: AGACAGGGTTATGGATTTCCAGAGCTCTTCCATGTA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAACAGTCCAAAACTTTaGTCCTGCTTGTACCTCTTA +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGNSPKL*SCLYLL
Trigger: TAAGAGGTACAAGCAGGACCAAAGTTTTGGACTGTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCCTGGATCAATATAGGTATCAATTCAGAAAATTCACACCAGATTGGGGAGGATTGGTGGGAGAATaGGGAGGAGATGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: LTLDQYRYQFRKFTPDWGGLVGE*GGDDGQ
Trigger: TTGACCATCATCTCCTCCCCATTCTCCCACCAATCC...TCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTGATCCAGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS-3UTR CCA 90 bp CTACAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCAGATTGGGGATTGGTaGGAGAATGGGGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: LQSIIIYCRLENCSRSQWQIGDW*ENGEEM
Trigger: CATCTCCTCCCCATTCTCCCACCAATCCCCAATCTG...CCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
3UTR CAA 72 bp GGGGTGTCTCTGAGGAAAAAGTTACTAATGCATAATTaGGCAGGAGCTGGTGATTGGAAGTCTCCATTTAAA +
Preference number: 4 (lower is better)
Translates to: GVSLRKKLLMHN*AGAGDWKSPFK
Trigger: TTTAAATGGAGACTTCCAATCACCAGCTCCTGCCAAATTATGCATTAGTAACTTTTTCCTCAGAGACACCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAAAAGGGCAGCACCTTTaGCAGTTAGAAAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTKGQHL*QLESSR
Trigger: GCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTT...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ATGGTACAAGTGCTACTGTCATTAGAGGAGAAATCCATTCCTAGGACGATGCTTTTGTCTACCATTAGTTaGAACCACTACCATATAGCG +
Preference number: 4 (lower is better)
Translates to: MVQVLLSLEEKSIPRTMLLSTIS*NHYHIA
Trigger: CGCTATATGGTAGTGGTTTCAACTAATGGTAGACAA...AAGCATCGTCCTAGGAATGGATTTCTCCTCTAATGACAGTAGCACTTGTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp AGAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTTATCCGTCGATACACTaGACCCACCATCACCATCCA +
Preference number: 4 (lower is better)
Translates to: RVTRTKIMQNDKAYWQITYPSIH*THHHHP
Trigger: TGGATGGTGATGGTGGGTTCAGTGTATCGACGGATA...AGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGCACAGATACAGGTTTaGATATGTGAACTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGAQIQV*ICELCY
Trigger: ATAACAGAGTTCACATATTCAAACCTGTATCTGTGC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTGTCAACCCACATTGCCTGCACAGATACAGGTTTGAATATGTGAACTCTGTTGCACAGATACAGGTTTaGATATGTGAACTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PVNPHCLHRYRFEYVNSVAQIQV*ICELCY
Trigger: ATAACAGAGTTCACATATTCAAACCTGTATCTGTGC...AACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR TCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCAGGTCACTATCTGAATaGGATCTCCATAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSRSLSE*DLHSLL
Trigger: TAACAAACTATGGAGATCTCATTCAGATAGTGACCT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAGGCTACTTCTACCACTaGCAGTCGACAGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTGYFYH*QSTALI
Trigger: AATGAGAGCTGTCGACTGTCAGTGGTAGAAGTAGCC...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGAAAGGCAACTAAAATaGGGAGAGATGAATATTACG +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGERQLK*GEMNIT
Trigger: CGTAATATTCATCTCTCCTCATTTTAGTTGCCTTTC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATCTCATAGGAAGCTTTaGGTTTACCCAACAGCATCT +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLSHRKL*VYPTAS
Trigger: AGATGCTGTTGGGTAAACTCAAAGCTTCCTATGAGA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp ATTCTCAAATCACAAAATCTTAGATTAGAAATAGTCTTAGAAGTCCCCCACTGCGGAAATCTGCCTCCCTaGACCAAGAATCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ILKSQNLRLEIVLEVPHCGNLPP*TKNPSS
Trigger: AGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCC...GCAGTGGGGGACTTCTAAGACTATTTCTAATCTAAGATTTTGTGATTTGAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR TCA 90 bp CAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCTCAGAATGGGGAGGAGATaGTGGTCAAAGGGTACAAAG +
Preference number: 4 (lower is better)
Translates to: QSIIIYCRLENCSRSQWLRMGRR*WSKGTK
Trigger: CTTTGTACCCTTTGACCATCATCTCCTCCCCATTCT...GAGCCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATTCTCCAAATCCTTCTaGATCATGATCTCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGFSKSF*IMISLN
Trigger: ATTAAGGGAGATCATGATGCAGAAGGATTTGGAGAA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAAGTTGCACACCATTTaGATTTCCAACTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGKLHTI*ISNSVL
Trigger: AAGAACAGAGTTGGAAATGCAAATGGTGTGCAACTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCTTACATATTACACCTaGCCCTTTTACAAACATTTC +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFILTYYT*PFYKHF
Trigger: GAAATGTTTGTAAAAGGGGCAGGTGTAATATGTAAG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGGTACACATAATCACTaGACCATAGAGACGCTTTTA +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKGTHNH*TIETLL
Trigger: TAAAAGCGTCTCTATGGTGCAGTGATTATGTGTACC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCCCTGTCAACCCACATTaGCTGCACAGATACAGGTTT +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLPVNPH*LHRYRF
Trigger: AAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGG...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCATACTCAAAGACTCCTaGGAAGAAGTTATCTATCTC +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSILKDS*EEVIYL
Trigger: GAGATAGATAACTTCTTCCCAGGAGTCTTTGAGTAT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACAGATGGGTTCGTGGTaGTCTGAGAGGTCACTATCT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTQMGSW*SERSLS
Trigger: AGATAGTGACCTCTCAGACCACCACGAACCCATCTG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTTGAATTCTTACGAGTaGACAATGAGGTACATGTTG +
Preference number: 4 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLNSYE*TMRYML
Trigger: CAACATGTACCTCATTGTCCACTCGTAAGAATTCAA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAACTCAGGATGGAGGTTaGATGGTCAGTGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTTQDGG*MVSGSV
Trigger: AACAGACCCACTGACCATCCAACCTCCATCCTGAGT...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATCTGCGCTACTTAGCTaGGAGTCCTTATATGGCACC +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTSALLS*ESLYGT
Trigger: GGTGCCATATAAGGACTCCCAGCTAAGTAGCGCAGA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCCACTTGGATTTCATTTaGGGTCCTGTTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIHLDFI*GPVLIS
Trigger: TGAAATTAAAACAGGACCCCAAATGAAATCCAAGTG...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAACAAACTCCTTGGCATaGTTGAATGACAGATATTCT +
Preference number: 4 (lower is better)
Translates to: THIYFLAVVEILANNVLGTNSLA*LNDRYS
Trigger: AGAATATCTGTCATTCAACCATGCCAAGGAGTTTGT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp AATGTTCTCCAGCCTTTGCTTGAATATTTCCAGCAATGTGCACTCACTATTTTGCTTCCTTACAATCACTaGAAATCTGCCTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: NVLQPLLEYFQQCALTILLPYNH*KSASLN
Trigger: GTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAG...CAAAATAGTGAGTGCACATTGCTGGAAATATTCAAGCAAAGGCTGGAGAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR CCA 90 bp CTACAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGGGATTGGTGGGAGAATaGGGAGGAGATGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: LQSIIIYCRLENCSRSQWGLVGE*GGDDGQ
Trigger: TTGACCATCATCTCCTCCCCATTCTCCCACCAATCC...CCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGATTGTCTACCATTAGTTaGAACCACTACCATATAGCG +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGLSTIS*NHYHIA
Trigger: CGCTATATGGTAGTGGTTTCAACTAATGGTAGACAA...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAACAGGTTTGAATATGTaGACTCTGTTATCCGTCGAT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGTGLNM*TLLSVD
Trigger: ATCGACGGATAACAGAGTTCACATATTCAAACCTGT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGAATCCTTCTGCATCATaGTCTCCCTTAATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKNPSAS*SPLIWF
Trigger: AAACCAAATTAAGGGAGATCATGATGCAGAAGGATT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCACAGTGTTTGTTCCTTaGATCCCTGTCAACCCACAT +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLTVFVP*IPVNPH
Trigger: ATGTGGGTTGACAGGGATTCAAGGAACAAACACTGT...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR GCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCCCATTCCTAGGACGATaGTTTCTTCAGTGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLPFLGR*FLQCLV
Trigger: GACAAGACACTGAAGAAAGCATCGTCCTAGGAATGG...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR GCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACAGGAGTCCTCATCTTaGTCCATATGTCCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTQESSS*SICPGL
Trigger: CAAACCTGGACATATGGAGCAAGATGAGGACTCCTG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAAATTCTTTGGCATACTaGACAAGGGGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTNSLAY*TRGLST
Trigger: AGTGGAGAGGCCCCTTGTGCAGTATGCCAAAGAATT...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAAATGATAAACGGTCTTaGCATCCAGATCAATCTCTC +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLNDKRS*HPDQSL
Trigger: GAGAGATTGATCTGGATGGCAAGACCGTTTATCATT...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGGAATTCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTTGAATATGTTCTCCAGCCTTTaGTTGAATATTTCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: RNSLYHLPGKMFSSLCLNMFSSL*LNISSN
Trigger: ATTGCTGGAAATATTCAAGCAAAGGCTGGAGAACAT...ATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATGCTTGTTCCGTCTGTaGCTGATTCTTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTCLFRL*LILGVD
Trigger: ATCCACACCAAGAATCAGCCACAGACGGAACAAGCA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAGCAAAACTAAGCCCATaGTACAAGTGCTACTGTCAT +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRAKLSP*YKCYCH
Trigger: ATGACAGTAGCACTTGTACCATGGGCTTAGTTTTGC...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAAGTAGTTATGCGCTCTaGCGACTTCACAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTSSYAL*RLHKPC
Trigger: ACAAGGCTTGTGAAGTCGCCAGAGCGCATAACTACT...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTAGCTGAATTAAGGCTTTaGATGCATGGCAATTGTCAA +
Preference number: 4 (lower is better)
Translates to: CICIFLSAVISQKPVSSLAELRL*MHGNCQ
Trigger: TTGACAATTGCCATGCATCCAAAGCCTTAATTCAGC...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GAAAGGCTGCTCCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTTGTTCCAATGATAAGGCATATTaGCAAATCACTCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ERLLQFILPPIVHHSVCSNDKAY*QITLQK
Trigger: TTTCTGGAGAGTGATTTGCCAATATGCCTTATCATT...GGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGGAGCAGCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CCA 90 bp TTAACCCTGGATCAATATAGGTATCAATTCAGAAAATTCACACCAGATTGGGGAAAATTCACACCAGATTaGGGATTGGTGGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: LTLDQYRYQFRKFTPDWGKFTPD*GLVGEW
Trigger: CCATTCTCCCACCAATCCCCAATCTGGTGTGAATTT...TCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTGATCCAGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS-3UTR TCA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGATTGTCTACCATTAGTTaGAACCACTACCATATAGCG +
Preference number: 4 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRLSTIS*NHYHIA
Trigger: CGCTATATGGTAGTGGTTTCAACTAATGGTAGACAA...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR TCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACAAACTTTAGAGAAATaGCAAACCTTCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGQTLEK*QTFQEK
Trigger: CTTTTCCTGGAAGGTTTGTCATTTCTCTAAAGTTTG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATATTGGTGGTGGAACTaGTTCAAGAAGGCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTYWWWN*FKKAGY
Trigger: ATACCCTGCCTTCTTGAAGCAGTTCCACCACCAATA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCAACCCACATTGCCTaGACAGATACAGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLSTHIA*TDTGLN
Trigger: ATTCAAACCTGTATCTGTGCAGGCAATGTGGGTTGA...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAACAAACTCCTTGGCATaGTTGAATGACAGATATTCT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGTNSLA*LNDRYS
Trigger: AGAATATCTGTCATTCAACCATGCCAAGGAGTTTGT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp CTACAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGAAATTCACACCAGATTaGGGATTGGTGGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: LQSIIIYCRLENCSRSQWKFTPD*GLVGEW
Trigger: CCATTCTCCCACCAATCCCCAATCTGGTGTGAATTT...CCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS-3UTR TCA 90 bp ACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCGCACAGATACAGGTTTaGATATGTGAACTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: TKIMQNDKAYWQITLQKGAQIQV*ICELCY
Trigger: ATAACAGAGTTCACATATTCAAACCTGTATCTGTGC...GCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR GCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACCAAAACTTTGGTCCTaGTTGTACCTCTTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTPKLWS*LYLLVC
Trigger: ACACACTAAGAGGTACAAGCAGGACCAAAGTTTTGG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGATTTCCTATTCATCTTTaGCAGTCTATCAAATCTGCT +
Preference number: 4 (lower is better)
Translates to: PPQNQENTKDPEETKMIGFPIHL*QSIKSA
Trigger: AGCAGATTTGATAGACTGGCAAAGATGAATAGGAAA...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp AGAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTTCAACCCACATTGCCTaGACAGATACAGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RVTRTKIMQNDKAYWQITSTHIA*TDTGLN
Trigger: ATTCAAACCTGTATCTGTGCAGGCAATGTGGGTTGA...AGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATGGCAAACAATGTTCTaGGATTTCAGTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTWQTMF*DFSLTE
Trigger: CTCTGTGAGACTGAAATCCCAGAACATTGTTTGCCA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAGAAGAGAAGACAGTCTaGAAAGTCCTTGACAGTTCA +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTEEKTV*KVLDSS
Trigger: TGAACTGTCAAGGACTTTCCAGACTGTCTTCTCTTC...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp AGAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTACAGGTTTGAATATGTaGACTCTGTTATCCGTCGAT +
Preference number: 4 (lower is better)
Translates to: RVTRTKIMQNDKAYWQITTGLNM*TLLSVD
Trigger: ATCGACGGATAACAGAGTTCACATATTCAAACCTGT...AGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAACAGGTTTGAATATGTaGACTCTGTTATCCGTCGAT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTTGLNM*TLLSVD
Trigger: ATCGACGGATAACAGAGTTCACATATTCAAACCTGT...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACAATGCGATCTGTACTaGAATCTGAGATTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTQCDLY*NLRFQS
Trigger: AGACTGAAATCTCAGATTTCAGTACAGATCGCATTG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR TCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACTTGGCATGGTTGAATaGCAGATATTCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTLGMVE*QIFCRR
Trigger: TCTTCTACAGAATATCTGTCATTCAACCATGCCAAG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACAACGAAAGCAAATCTaGAAGCCTCTTCAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTQRKQI*KPLQFQ
Trigger: TTGAAACTGAAGAGGCTTGCAGATTTGCTTTCGTTG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATCAATTAAGAAACCATaGCTTTTCTCAGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTSIKKP*LFSEGK
Trigger: TTTGCCCTCTGAGAAAAGGCATGGTTTCTTAATTGA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR GCA 90 bp ATTCTCAAATCACAAAATCTTAGATTAGAAATAGTCTTAGAAGTCCCCCACTGCATATTTCCAGCAATGTaGACTCACTATTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: ILKSQNLRLEIVLEVPHCIFPAM*THYFAR
Trigger: CCTTGCAAAATAGTGAGTGCACATTGCTGGAAATAT...GCAGTGGGGGACTTCTAAGACTATTTCTAATCTAAGATTTTGTGATTTGAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATTGAATTCTTACGAGTaGACAATGAGGTACATGTTG +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTLNSYE*TMRYML
Trigger: CAACATGTACCTCATTGTCCACTCGTAAGAATTCAA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CCA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCAATGATAAGGCATATTaGCAAATCACTCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLNDKAY*QITLQK
Trigger: TTTCTGGAGAGTGATTTGCCAATATGCCTTATCATT...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CCA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACACTTGGATTTCATTTaGGGTCCTGTTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTHLDFI*GPVLIS
Trigger: TGAAATTAAAACAGGACCCCAAATGAAATCCAAGTG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS GCA 90 bp CATCCTGGCCTCTGCTCTGCTCCGGCACGAGGCGCAGGCTGCGCGTaGACCCGGCGGCGGAGGCGGGCCCGCCGGGTCGCGCGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HPGLCSAPARGAGCA*TRRRRRARRVARRQ
Trigger: CTGCCTCCGCGCGACCCGGCGGGCCCGCCTCCGCCGCCGGGTGCACGCGCAGCCTGCGCCTCGTGCCGGAGCAGAGCAGAGGCCAGGATG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649863.1
CDS TCA 90 bp GGGAACGGCCGCAGACTCCGCACCCACCACCAGACTGTCGCCGACTaGCGCTCCGAACGGGCGGCGGGCGGGCGGTTCCGCAGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: GNGRRLRTHHQTVAD*RSERAAGGRFRSCG
Trigger: CCCGCAGCTGCGGAACCGCCCGCCCGCCGCCCGTTCGGAGCGTCAGTCGGCGACAGTCTGGTGGTGGGTGCGGAGTCTGCGGCCGTTCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540801.6
ENST00000590153.1
CDS TCA 90 bp TCCGAACGGGCGGCGGGCGGGCGGTTCCGCAGCTGCGGGGCACAATaGGCGCTCCCAGTGCGCAGGCGCCACCTGTCAGCTACCGCCTCT +
Preference number: 5 (lower is better)
Translates to: SERAAGGRFRSCGAQ*ALPVRRRHLSATAS
Trigger: AGAGGCGGTAGCTGACAGGTGGCGCCTGCGCACTGGGAGCGCTCATTGTGCCCCGCAGCTGCGGAACCGCCCGCCCGCCGCCCGTTCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS GCA 90 bp TGGGGCCGGCTCAAAGTGCACAACTCCGCATCCTGGCCTCTGCTCTaGTCCGGCACGAGGCGCAGGCTGCGCGTGCACCCGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: WGRLKVHNSASWPLL*SGTRRRLRVHPAAE
Trigger: CTCCGCCGCCGGGTGCACGCGCAGCCTGCGCCTCGTGCCGGAGCAGAGCAGAGGCCAGGATGCGGAGTTGTGCACTTTGAGCCGGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 90 bp GGTCATGGGGCCGGCTCAAAGTGCACAACTCCGCATCCTGGCCTCTaGTCTGCTCCGGCACGAGGCGCAGGCTGCGCGTGCACCCGGCGG +
Preference number: 5 (lower is better)
Translates to: GHGAGSKCTTPHPGL*SAPARGAGCACTRR
Trigger: CCGCCGGGTGCACGCGCAGCCTGCGCCTCGTGCCGGAGCAGAGCAGAGGCCAGGATGCGGAGTTGTGCACTTTGAGCCGGCCCCATGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS CCA 90 bp TGCTCAGGGTCATGGGGCCGGCTCAAAGTGCACAACTCCGCATCCTaGCCTCTGCTCTGCTCCGGCACGAGGCGCAGGCTGCGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: CSGSWGRLKVHNSAS*PLLCSGTRRRLRVH
Trigger: GTGCACGCGCAGCCTGCGCCTCGTGCCGGAGCAGAGCAGAGGCCAGGATGCGGAGTTGTGCACTTTGAGCCGGCCCCATGACCCTGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 90 bp CCTCTTGCGGGCCAACGTGCTCAGGGTCATGGGGCCGGCTCAAAGTaGACAACTCCGCATCCTGGCCTCTGCTCTGCTCCGGCACGAGGC +
Preference number: 5 (lower is better)
Translates to: PLAGQRAQGHGAGSK*TTPHPGLCSAPARG
Trigger: GCCTCGTGCCGGAGCAGAGCAGAGGCCAGGATGCGGAGTTGTGCACTTTGAGCCGGCCCCATGACCCTGAGCACGTTGGCCCGCAAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 90 bp GGCTGCAGGTGCAAGCGAGGGGCGCCTTCCTCTTGCGGGCCAACGTaGTCAGGGTCATGGGGCCGGCTCAAAGTGCACAACTCCGCATCC +
Preference number: 5 (lower is better)
Translates to: GCRCKRGAPSSCGPT*SGSWGRLKVHNSAS
Trigger: GGATGCGGAGTTGTGCACTTTGAGCCGGCCCCATGACCCTGAGCACGTTGGCCCGCAAGAGGAAGGCGCCCCTCGCTTGCACCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 90 bp CCGCGTTGGCGGAGAAGTAAGGAATCATGTCGGGGCCACCGAGGCTaGAGGTGCAAGCGAGGGGCGCCTTCCTCTTGCGGGCCAACGTGC +
Preference number: 5 (lower is better)
Translates to: PRWRRSKESCRGHRG*RCKRGAPSSCGPTC
Trigger: GCACGTTGGCCCGCAAGAGGAAGGCGCCCCTCGCTTGCACCTGCAGCCTCGGTGGCCCCGACATGATTCCTTACTTCTCCGCCAACGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 90 bp TGGCGGAGAAGTAAGGAATCATGTCGGGGCCACCGAGGCTGCAGGTaGAAGCGAGGGGCGCCTTCCTCTTGCGGGCCAACGTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: WRRSKESCRGHRGCR*KRGAPSSCGPTCSG
Trigger: CCCTGAGCACGTTGGCCCGCAAGAGGAAGGCGCCCCTCGCTTGCACCTGCAGCCTCGGTGGCCCCGACATGATTCCTTACTTCTCCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS CCA 90 bp AAGCGAGGGGCGCCTTCCTCTTGCGGGCCAACGTGCTCAGGGTCATaGGGCCGGCTCAAAGTGCACAACTCCGCATCCTGGCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: KRGAPSSCGPTCSGS*GRLKVHNSASWPLL
Trigger: GAGCAGAGGCCAGGATGCGGAGTTGTGCACTTTGAGCCGGCCCCATGACCCTGAGCACGTTGGCCCGCAAGAGGAAGGCGCCCCTCGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 90 bp AAGGTGGCTCGCCTCACAGACCCAGGGTACCACTTGGCACCTGGGTaGATCCCTGAGCCCTGGAGCTCTTGTTCCCCCTCAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: KVARLTDPGYHLAPG*IPEPWSSCSPSAGS
Trigger: GGAACCAGCTGAGGGGGAACAAGAGCTCCAGGGCTCAGGGATGCACCCAGGTGCCAAGTGGTACCCTGGGTCTGTGAGGCGAGCCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp CTTCGAACTCCAAGGTGGCTCGCCTCACAGACCCAGGGTACCACTTaGCACCTGGGTGCATCCCTGAGCCCTGGAGCTCTTGTTCCCCCT +
Preference number: 5 (lower is better)
Translates to: LRTPRWLASQTQGTT*HLGASLSPGALVPP
Trigger: AGGGGGAACAAGAGCTCCAGGGCTCAGGGATGCACCCAGGTGCCAAGTGGTACCCTGGGTCTGTGAGGCGAGCCACCTTGGAGTTCGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp ACAGACCCAGGGTACCACTTGGCACCTGGGTGCATCCCTGAGCCCTaGAGCTCTTGTTCCCCCTCAGCTGGTTCCCCTTCTTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: TDPGYHLAPGCIPEP*SSCSPSAGSPSSKS
Trigger: AGACTTGGAAGAAGGGGAACCAGCTGAGGGGGAACAAGAGCTCCAGGGCTCAGGGATGCACCCAGGTGCCAAGTGGTACCCTGGGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp CATGATGCTCTTGCTCCTGCCGTAAGCGCTCTTCGAACTCCAAGGTaGCTCGCCTCACAGACCCAGGGTACCACTTGGCACCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: HDALAPAVSALRTPR*LASQTQGTTWHLGA
Trigger: TGCACCCAGGTGCCAAGTGGTACCCTGGGTCTGTGAGGCGAGCCACCTTGGAGTTCGAAGAGCGCTTACGGCAGGAGCAAGAGCATCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp GGGCTGTGGACAGGCTGCTGCCTCTGTCTTCAGGGCTACTCAGGATaGAGGTTGGATGGTCAGTGGGTCTGTTGTGCTCAGGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GLWTGCCLCLQGYSG*RLDGQWVCCAQGRK
Trigger: CTTCCTCCCCTGAGCACAACAGACCCACTGACCATCCAACCTCCATCCTGAGTAGCCCTGAAGACAGAGGCAGCAGCCTGTCCACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 90 bp AGGACTCCTTCCTGCTGTGTTCCAGTATCTGACCCTGGGCCCTCCTaGGGATCTGGCAAGTGGTCAAACTCCAGCACCCTGGGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: RTPSCCVPVSDPGPS*GSGKWSNSSTLGAG
Trigger: TCCAGCTCCCAGGGTGCTGGAGTTTGACCACTTGCCAGATCCTCAGGAGGGCCCAGGGTCAGATACTGGAACACAGCAGGAAGGAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp CTGGGCCCTCCTGAGGATCTGGCAAGTGGTCAAACTCCAGCACCCTaGGAGCTGGAACAGTGGCATTCTGCTCAGAATGGGACAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LGPPEDLASGQTPAP*ELEQWHSAQNGTVS
Trigger: GCTCACTGTCCCATTCTGAGCAGAATGCCACTGTTCCAGCTCCCAGGGTGCTGGAGTTTGACCACTTGCCAGATCCTCAGGAGGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGTGAGTTCTGCCGTGTaGCTGACGGGGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSVSSAV*LTGCHG
Trigger: GCCGTGGCACCCCGTCAGCAACACGGCAGAACTCAC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp GAGGTTGGATGGTCAGTGGGTCTGTTGTGCTCAGGGGAGGAAGAATaGGGCAGAGGTAGCACTTGGGGGTGCAGAGAAACCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: EVGWSVGLLCSGEEE*GRGSTWGCRETWLG
Trigger: CCCCAACCAGGTTTCTCTGCACCCCCAAGTGCTACCTCTGCCTCATTCTTCCTCCCCTGAGCACAACAGACCCACTGACCATCCAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp GGACAGGCTGCTGCCTCTGTCTTCAGGGCTACTCAGGATGGAGGTTaGATGGTCAGTGGGTCTGTTGTGCTCAGGGGAGGAAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: GQAAASVFRATQDGG*MVSGSVVLRGGRMR
Trigger: CCTCATTCTTCCTCCCCTGAGCACAACAGACCCACTGACCATCCAACCTCCATCCTGAGTAGCCCTGAAGACAGAGGCAGCAGCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCAGTTCTAGCCCAGGTTaGCAGATGGGTTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSSSPG*QMGSWW
Trigger: CCACCACGAACCCATCTGCAAACCTGGGCTAGAACT...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTATGCCGCTGTTTGCTaGCCAGCAAGATCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGYAAVC*PARSPD
Trigger: ATCAGGGGATCTTGCTGGCAAGCAAACAGCGGCATA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTGCAGAGAAACCTGGTaGGGGTCCAGAGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGCRETW*GSRVLF
Trigger: AAACAGGACTCTGGACCCCAACCAGGTTTCTCTGCA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCTCATTTGGGATGGTTaGGTGAGCCCTGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGLIWDG*VSPAWK
Trigger: TTTCCAGGCAGGGCTCACCAAACCATCCCAAATGAG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp AGTCCTCAGATCCTTCAGGACTCCTTCCTGCTGTGTTCCAGTATCTaGCCCTGGGCCCTCCTGAGGATCTGGCAAGTGGTCAAACTCCAG +
Preference number: 5 (lower is better)
Translates to: SPQILQDSFLLCSSI*PWALLRIWQVVKLQ
Trigger: CTGGAGTTTGACCACTTGCCAGATCCTCAGGAGGGCCCAGGGTCAGATACTGGAACACAGCAGGAAGGAGTCCTGAAGGATCTGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp AGTGTGTGGTTAGGCAGCCTTCTGGGTTGCACATCCCTGAGTCTTTaGCTAGTTCAGGCTGGGCTGTGCAGGAGTCCTCATCTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SVWLGSLLGCTSLSL*LVQAGLCRSPHLAP
Trigger: TGGAGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCCAGAAGGCTGCCTAACCACACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp AACTCCAGCACCCTGGGAGCTGGAACAGTGGCATTCTGCTCAGAATaGGACAGTGAGCCAGCCTCAGACCCACTGTATTTCCCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: NSSTLGAGTVAFCSE*DSEPASDPLYFPLP
Trigger: AGGCAAAGGGAAATACAGTGGGTCTGAGGCTGGCTCACTGTCCCATTCTGAGCAGAATGCCACTGTTCCAGCTCCCAGGGTGCTGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp TGCCTCTGTCTTCAGGGCTACTCAGGATGGAGGTTGGATGGTCAGTaGGTCTGTTGTGCTCAGGGGAGGAAGAATGAGGCAGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: CLCLQGYSGWRLDGQ*VCCAQGRKNEAEVA
Trigger: TGCTACCTCTGCCTCATTCTTCCTCCCCTGAGCACAACAGACCCACTGACCATCCAACCTCCATCCTGAGTAGCCCTGAAGACAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCGACTCACCCCCATTTaGCAGTGCACAAGGCATTTA +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGRLTPI*QCTRHL
Trigger: TAAATGCCTTGTGCACTGCAAAATGGGGGTGAGTCG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTCATCAGCTGTCACTTaGGAAGGGGCTACTTCTACC +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSSAVT*EGATST
Trigger: GGTAGAAGTAGCCCCTTCCAAAGTGACAGCTGATGA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGACCCAGGGTACCACTaGGCACCTGGGTGCATCCCT +
Preference number: 5 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWDPGYH*APGCIP
Trigger: AGGGATGCACCCAGGTGCCAAGTGGTACCCTGGGTC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCATCACTTTTCCCTTTaGGTGCTAGGTCTGCCACAG +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGHHFSL*VLGLPQ
Trigger: CTGTGGCAGACCTAGCACCAAAAGGGAAAAGTGATG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGAAGCTACAAGAGGCTaGTTTATGACAGGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGEATRG*FMTGAA
Trigger: AGCAGCGCCTGTCATAAACAAGCCTCTTGTAGCTTC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCCTTTTCTGCATCTTTaGGGTCGCCCTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAPFLHL*GRPAIC
Trigger: GCAGATGGCAGGGCGACCCAAAAGATGCAGAAAAGG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp CACCCTGGGAGCTGGAACAGTGGCATTCTGCTCAGAATGGGACAGTaGGCCAGCCTCAGACCCACTGTATTTCCCTTTGCCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: HPGSWNSGILLRMGQ*ASLRPTVFPFAFAH
Trigger: ATGAGCAAAGGCAAAGGGAAATACAGTGGGTCTGAGGCTGGCTCACTGTCCCATTCTGAGCAGAATGCCACTGTTCCAGCTCCCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS GCA 90 bp GAGTCTTTGGCTAGTTCAGGCTGGGCTGTGCAGGAGTCCTCATCTTaGTCCATATGTCCAGGTTTGTTCTCTGGAGTCTGGGCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: ESLASSGWAVQESSS*SICPGLFSGVWALS
Trigger: TGAGAGGGCCCAGACTCCAGAGAACAAACCTGGACATATGGAGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp CAGCCTTCTGGGTTGCACATCCCTGAGTCTTTGGCTAGTTCAGGCTaGGCTGTGCAGGAGTCCTCATCTTGCTCCATATGTCCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: QPSGLHIPESLASSG*AVQESSSCSICPGL
Trigger: CAAACCTGGACATATGGAGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCCAGAAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTCTCATGAAGCTTGGGTaGGGCTTGGTTACCGTTCGT +
Preference number: 5 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTALMKLG*GLVTVR
Trigger: ACGAACGGTAACCAAGCCCAACCCAAGCTTCATGAG...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTATGCCGCTGTTTGCTaGCCAGCAAGATCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAYAAVC*PARSPD
Trigger: ATCAGGGGATCTTGCTGGCAAGCAAACAGCGGCATA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGGCCTCTCCACTGGCTaGCTCTGCACAATACACTCT +
Preference number: 5 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQGLSTG*LCTIHS
Trigger: AGAGTGTATTGTGCAGAGCAAGCCAGTGGAGAGGCC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp GGAGATGCTGTTGGAGATCGCCTGCATGCTTGTTCCGTCTGTGGCTaGTTCTTGGTGTGGATGAGCCATTTCCCCGTGGTAGAAAAAGGG +
Preference number: 5 (lower is better)
Translates to: GDAVGDRLHACSVCG*FLVWMSHFPVVEKG
Trigger: CCCTTTTTCTACCACGGGGAAATGGCTCATCCACACCAAGAATCAGCCACAGACGGAACAAGCATGCAGGCGATCTCCAACAGCATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000269033.7
ENST00000324677.12
ENST00000394848.5
ENST00000540801.6
ENST00000577483.1
ENST00000579040.5
ENST00000592397.1
ENST00000649863.1
CDS GCA 90 bp CTGGGTTGCACATCCCTGAGTCTTTGGCTAGTTCAGGCTGGGCTGTaGAGGAGTCCTCATCTTGCTCCATATGTCCAGGTTTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LGCTSLSLWLVQAGL*RSPHLAPYVQVCSL
Trigger: CAGAGAACAAACCTGGACATATGGAGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp ACCCTCTTGGGAAGGGGAAGAGGGACTGCTTGTGTTTCAGACTCCTaGTATGGAATCACAGTCCTCAGATCCTTCAGGACTCCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: TLLGRGRGTACVSDS*YGITVLRSFRTPSC
Trigger: GCAGGAAGGAGTCCTGAAGGATCTGAGGACTGTGATTCCATACCAGGAGTCTGAAACACAAGCAGTCCCTCTTCCCCTTCCCAAGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp AGAGAAGCTGAGCGCCTCATTTGGGATGGTTTGGTGAGCCCTGCCTaGAAAACCACTCGAGACTCGATTTCTTTAGCACGCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: REAERLIWDGLVSPA*KTTRDSISLARSFT
Trigger: GGTGAAGGAGCGTGCTAAAGAAATCGAGTCTCGAGTGGTTTTCCAGGCAGGGCTCACCAAACCATCCCAAATGAGGCGCTCAGCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000577991.1
ENST00000649863.1
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTTGTTATGCCGCTGTTaGCTTGCCAGCAAGATCCCC +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSLLCRC*LASKIP
Trigger: GGGGATCTTGCTGGCAAGCAAACAGCGGCATAACAA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCGTGATATCCTTCTTGTaGAGTTCTAGCCCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGVISFL*SSSPGL
Trigger: CAAACCTGGGCTAGAACTCAACAAGAAGGATATCAC...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTCATCAGCTGTCACTTaGGAAGGGGCTACTTCTACC +
Preference number: 5 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTASSAVT*EGATST
Trigger: GGTAGAAGTAGCCCCTTCCAAAGTGACAGCTGATGA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGGATGCTGTTCTTCTTaGGTGTATGGCATGGGTTGG +
Preference number: 5 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAGCCSS*VYGMGW
Trigger: CCAACCCATGCCATACACCAAAGAAGAACAGCATCC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGACCCAGGGTACCACTaGGCACCTGGGTGCATCCCT +
Preference number: 5 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIDPGYH*APGCIP
Trigger: AGGGATGCACCCAGGTGCCAAGTGGTACCCTGGGTC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACTCATTTGGGATGGTTaGGTGAGCCCTGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQLIWDG*VSPAWK
Trigger: TTTCCAGGCAGGGCTCACCAAACCATCCCAAATGAG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCTCTACAGAAGACCACTaGGATTTCATTTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGSTEDH*DFIWGP
Trigger: AGGACCCCAAATGAAATCCAAGTGGTCTTCTGTAGA...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAGTCACTGTGGGCACTaGCCCCTGGCTGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGSHCGH*PLAEAS
Trigger: GGAGGCCTCAGCCAGGGGCAAGTGCCCACAGTGACT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCAGTCACTGTGGGCACTaGCCCCTGGCTGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSSHCGH*PLAEAS
Trigger: GGAGGCCTCAGCCAGGGGCAAGTGCCCACAGTGACT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCAGTCTGGAAAGTCCTaGACAGTTCACTGCGCACCT +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSQSGKS*TVHCAP
Trigger: AGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp GAATTCTTACGAGTGGACAATGAGGTACATGTTGGGGCAGCACCATaGTGCTCTTGCTCCTGCCGTAAGCGCTCTTCGAACTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: EFLRVDNEVHVGAAP*CSCSCRKRSSNSKV
Trigger: CACCTTGGAGTTCGAAGAGCGCTTACGGCAGGAGCAAGAGCATCATGGTGCTGCCCCAACATGTACCTCATTGTCCACTCGTAAGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp TGTGCAGGAGTCCTCATCTTGCTCCATATGTCCAGGTTTGTTCTCTaGAGTCTGGGCCCTCTCAAGGAGCAGCTCATGGATGCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: CAGVLILLHMSRFVL*SLGPLKEQLMDAVL
Trigger: AAGAACAGCATCCATGAGCTGCTCCTTGAGAGGGCCCAGACTCCAGAGAACAAACCTGGACATATGGAGCAAGATGAGGACTCCTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp CTTGGGAAGGGGAAGAGGGACTGCTTGTGTTTCAGACTCCTGGTATaGAATCACAGTCCTCAGATCCTTCAGGACTCCTTCCTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: LGKGKRDCLCFRLLV*NHSPQILQDSFLLC
Trigger: ACACAGCAGGAAGGAGTCCTGAAGGATCTGAGGACTGTGATTCCATACCAGGAGTCTGAAACACAAGCAGTCCCTCTTCCCCTTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGCGACTTCACAAGCCTaGTGTAAGCTCTGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSATSQA*CKLCSA
Trigger: TGCACTACAGAGCTTACACAAGGCTTGTGAAGTCGC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGAGTTCTAGCCCAGGTTaGCAGATGGGTTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGSSSPG*QMGSWW
Trigger: CCACCACGAACCCATCTGCAAACCTGGGCTAGAACT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGCAGGAGTCCTCATCTaGCTCCATATGTCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQAGVLI*LHMSRF
Trigger: AAACCTGGACATATGGAGCAAGATGAGGACTCCTGC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGCACATCCCTGAGTCTTaGGCTAGTTCAGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGHIPES*ASSGWA
Trigger: AGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTG...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCCACACTGACTTTCGATaGCTGCTTTTCAAACATGTC +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGHTDFR*LLFKHV
Trigger: GACATGTTTGAAAAGCAGCAATCGAAAGTCAGTGTG...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCCCTTCCCCATCATATaGGTGGTGGAACTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSPFPII*VVELLQ
Trigger: TTGAAGCAGTTCCACCACCAATATGATGGGGAAGGG...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp CACTGTTACAAATTCTTCCTTACAATCACTGGAAATCTGCCTCCCTaGACCAAGAATCCCAGTTCTGCTCTCGAGGCGCAGGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HCYKFFLTITGNLPP*TKNPSSALEAQGLE
Trigger: CTCCAGCCCCTGCGCCTCGAGAGCAGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAGAATTTGTAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS GCA 90 bp GTTTGTTCTCTGGAGTCTGGGCCCTCTCAAGGAGCAGCTCATGGATaGTGTTCTTCTTTGGTGTATGGCATGGGTTGGGTAAGATGTCTC +
Preference number: 5 (lower is better)
Translates to: VCSLESGPSQGAAHG*CSSLVYGMGWVRCL
Trigger: GAGACATCTTACCCAACCCATGCCATACACCAAAGAAGAACAGCATCCATGAGCTGCTCCTTGAGAGGGCCCAGACTCCAGAGAACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp CGTTCAGTAGGTATGTCGGTGAAGAGAGCTGGAGAGTCGGGCCGGTaGGACTGTACATCTTGCATTGCATTCCATTCATTGACTGAGGAT +
Preference number: 5 (lower is better)
Translates to: RSVGMSVKRAGESGR*DCTSCIAFHSLTED
Trigger: ATCCTCAGTCAATGAATGGAATGCAATGCAAGATGTACAGTCCCACCGGCCCGACTCTCCAGCTCTCTTCACCGACATACCTACTGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp GAGTCCTCATCTTGCTCCATATGTCCAGGTTTGTTCTCTGGAGTCTaGGCCCTCTCAAGGAGCAGCTCATGGATGCTGTTCTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: ESSSCSICPGLFSGV*ALSRSSSWMLFFFG
Trigger: ACCAAAGAAGAACAGCATCCATGAGCTGCTCCTTGAGAGGGCCCAGACTCCAGAGAACAAACCTGGACATATGGAGCAAGATGAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp AAGAATGAGGCAGAGGTAGCACTTGGGGGTGCAGAGAAACCTGGTTaGGGTCCAGAGTCCTGTTTAGATTTTCATCCAGTGTGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: KNEAEVALGGAEKPG*GPESCLDFHPVCRA
Trigger: TGCTCTGCACACTGGATGAAAATCTAAACAGGACTCTGGACCCCAACCAGGTTTCTCTGCACCCCCAAGTGCTACCTCTGCCTCATTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCAAAAGGGCAGCACCTTaGACAGTTAGAAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSKRAAP*TVRKLS
Trigger: CGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTGCTTGGAGATGCTGTaGGAGATCGCCTGCATGCTT +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPICLEML*EIACML
Trigger: AAGCATGCAGGCGATCTCCAACAGCATCTCCAAGCA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTGCTTGGAGATGCTGTaGGAGATCGCCTGCATGCTT +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGCLEML*EIACML
Trigger: AAGCATGCAGGCGATCTCCAACAGCATCTCCAAGCA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCACAGCCAGCCTGATGTaGTCTTCTGGGCGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPITASLM*SSGRSK
Trigger: TTTACTCCGCCCAGAAGACAACATCAGGCTGGCTGT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAAGCCATATTCCTTCATaGCATAGGCAATCACGGTGG +
Preference number: 5 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQSHIPS*HRQSRW
Trigger: CCACCGTGATTGCCTATGCAATGAAGGAATATGGCT...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGTGGTGATATCCTTCTaGTTGAGTTCTAGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSVVISF*LSSSPG
Trigger: ACCTGGGCTAGAACTCAACAAGAAGGATATCACCAC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGATGTCTCCTTTCAGTaGAATCTGCCCAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSDVSFQ*NLPNSL
Trigger: CAAGGAGTTGGGCAGATTCAACTGAAAGGAGACATC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAACTAGAACCAAATTCTTaGGCATACTGCACAAGGGGC +
Preference number: 5 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQLEPNS*AYCTRG
Trigger: GCCCCTTGTGCAGTATGCCAAAGAATTTGGTTCTAG...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTGAGTTCTGCCGTGTaGCTGACGGGGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVSSAV*LTGCHG
Trigger: GCCGTGGCACCCCGTCAGCAACACGGCAGAACTCAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCAAACTTTGGTCCTGCTaGTACCTCTTAGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSKLWSC*YLLVCG
Trigger: CCCACACACTAAGAGGTACAAGCAGGACCAAAGTTT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGAACTCTAAAGGGCTGCGGCTGGATGAAGGCTGAGAGCCCTCTGACTTCTGGCAACTCCTTGGCATGGTaGAATGACAGATATTCTGTA +
Preference number: 5 (lower is better)
Translates to: GTLKGCGWMKAESPLTSGNSLAW*NDRYSV
Trigger: TACAGAATATCTGTCATTCAACCATGCCAAGGAGTT...GCCAGAAGTCAGAGGGCTCTCAGCCTTCATCCAGCCGCAGCCCTTTAGAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCAGTCTGGAAAGTCCTaGACAGTTCACTGCGCACCT +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIQSGKS*TVHCAP
Trigger: AGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGATCTTCAGGCTGTCCTaGGAGCTCTGGGTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWIFRLS*ELWVVC
Trigger: GCAAACTACCCAGAGCTCCAAGGACAGCCTGAAGAT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCATCTTCAGGCTGTCCTaGGAGCTCTGGGTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIIFRLS*ELWVVC
Trigger: GCAAACTACCCAGAGCTCCAAGGACAGCCTGAAGAT...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CACCATCCAAATGAATTAGCGTGTCGCTCCAGAGAGGCAAAACTAAGCCCATGGCCCTGTCAACCCACATaGCCTGCACAGATACAGGTT +
Preference number: 5 (lower is better)
Translates to: HHPNELACRSREAKLSPWPCQPT*PAQIQV
Trigger: AACCTGTATCTGTGCAGGCAATGTGGGTTGACAGGG...CCATGGGCTTAGTTTTGCCTCTCTGGAGCGACACGCTAATTCATTTGGATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS GCA 90 bp GTGCACTCCACTGTTACAAATTCTTCCTTACAATCACTGGAAATCTaGCTCCCTGAACCAAGAATCCCAGTTCTGCTCTCGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VHSTVTNSSLQSLEI*LPEPRIPVLLSRRR
Trigger: CCTGCGCCTCGAGAGCAGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAGAATTTGTAACAGTGGAGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS CCA 90 bp GATTTGCATCTTGTGGGACCATATGTTCCACAAAGACAGGAGGTATaGGTGGGTGACTCTCCATGGTCTTCACCTCAGCAATCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: DLHLVGPYVPQRQEV*VGDSPWSSPQQSGL
Trigger: CAGACCAGATTGCTGAGGTGAAGACCATGGAGAGTCACCCACCCATACCTCCTGTCTTTGTGGAACATATGGTCCCACAAGATGCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp CGAGACTCGATTTCTTTAGCACGCTCCTTCACCACACCGGGGCTGTaGCTGAGACTCTTTATGTTTTCACTACTAGAGCTATGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: RDSISLARSFTTPGL*LRLFMFSLLELCGS
Trigger: ACTCCCACATAGCTCTAGTAGTGAAAACATAAAGAGTCTCAGCCACAGCCCCGGTGTGGTGAAGGAGCGTGCTAAAGAAATCGAGTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000577991.1
ENST00000649863.1
CDS-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTTGTAGGGCTATCCATTaGACCAAGGATCACTATCAT +
Preference number: 5 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTACRAIH*TKDHYH
Trigger: ATGATAGTGATCCTTGGTCAAATGGATAGCCCTACA...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGAAGCTTGGGTTGGGCTaGGTTACCGTTCGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWKLGLG*VTVRLS
Trigger: AGAAAGACGAACGGTAACCAAGCCCAACCCAAGCTT...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGTGATATCCTTCTTGTaGAGTTCTAGCCCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSVISFL*SSSPGL
Trigger: CAAACCTGGGCTAGAACTCAACAAGAAGGATATCAC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGTTCTGAAATTGCCTTaGACTGTTCCTCATCCATTG +
Preference number: 5 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAVLKLP*TVPHPL
Trigger: CAATGGATGAGGAACAGTCAAAGGCAATTTCAGAAC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGGTGTATGGCATGGGTaGGGTAAGATGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIGVWHG*GKMSPF
Trigger: GAAAGGAGACATCTTACCCAACCCATGCCATACACC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGCAGGAGTCCTCATCTaGCTCCATATGTCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIAGVLI*LHMSRF
Trigger: AAACCTGGACATATGGAGCAAGATGAGGACTCCTGC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGACAATGAGGTACATGTaGGGGCAGCACCATGATGCT +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGTMRYM*GQHHDA
Trigger: AGCATCATGGTGCTGCCCCAACATGTACCTCATTGT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCATCACTTTTCCCTTTaGGTGCTAGGTCTGCCACAG +
Preference number: 5 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWHHFSL*VLGLPQ
Trigger: CTGTGGCAGACCTAGCACCAAAAGGGAAAAGTGATG...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTGTTCTACAAAAGACTaGGTGGGCTCTGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGCSTKD*VGSGLW
Trigger: CCACAACCCAGAGCCCACCAAGTCTTTTGTAGAACA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCGGCCTCTCCACTGGCTaGCTCTGCACAATACACTCT +
Preference number: 5 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIGLSTG*LCTIHS
Trigger: AGAGTGTATTGTGCAGAGCAAGCCAGTGGAGAGGCC...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCGAAGCTACAAGAGGCTaGTTTATGACAGGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIEATRG*FMTGAA
Trigger: AGCAGCGCCTGTCATAAACAAGCCTCTTGTAGCTTC...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGAACAGTCCAAAACTTaGGTCCTGCTTGTACCTCTT +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSEQSKT*VLLVPL
Trigger: AAGAGGTACAAGCAGGACCAAAGTTTTGGACTGTTC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGAACAGTCCAAAACTTaGGTCCTGCTTGTACCTCTT +
Preference number: 5 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQEQSKT*VLLVPL
Trigger: AAGAGGTACAAGCAGGACCAAAGTTTTGGACTGTTC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp TCAGAACTAGTCAATTCAAGTCCTGCCCTGGGGAGCAAATACTGCTaGCTAGAACCAAATTCTTTGGCATACTGCACAAGGGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SELVNSSPALGSKYC*LEPNSLAYCTRGLS
Trigger: GGAGAGGCCCCTTGTGCAGTATGCCAAAGAATTTGGTTCTAGTCAGCAGTATTTGCTCCCCAGGGCAGGACTTGAATTGACTAGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 90 bp CTCACCTTGCCAGCAAGATCCCCTGATACTCTTCCAGTTGTCTCATaGAGCTTGGGTTGGGCTTGGTTACCGTTCGTCTTTCTTTCACAT +
Preference number: 5 (lower is better)
Translates to: LTLPARSPDTLPVVS*SLGWAWLPFVFLSH
Trigger: ATGTGAAAGAAAGACGAACGGTAACCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394848.5
CDS TCA 90 bp GAGAATTGGAGAAAGTCACTGACTCACCTTGCCAGCAAGATCCCCTaGTACTCTTCCAGTTGTCTCATGAAGCTTGGGTTGGGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: ENWRKSLTHLASKIP*YSSSCLMKLGLGLV
Trigger: AACCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGGTGAGTCAGTGACTTTCTCCAATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394848.5
CDS CCA 90 bp GGAGCAGCTCATGGATGCTGTTCTTCTTTGGTGTATGGCATGGGTTaGGTAAGATGTCTCCTTTCAGTTGAATCTGCCCAACTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: GAAHGCCSSLVYGMG*VRCLLSVESAQLLD
Trigger: GTCAAGGAGTTGGGCAGATTCAACTGAAAGGAGACATCTTACCCAACCCATGCCATACACCAAAGAAGAACAGCATCCATGAGCTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp TTGTCACCAAGTTTGCTAATTAAACTTAGGTCTGCGCTACTTAGCTaGGAGTCCTTATATGGCACCTCACTGCCACTGGAGAGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LSPSLLIKLRSALLS*ESLYGTSLPLERGL
Trigger: GAGCCCTCTCTCCAGTGGCAGTGAGGTGCCATATAAGGACTCCCAGCTAAGTAGCGCAGACCTAAGTTTAATTAGCAAACTTGGTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGAAAAGGGCAGCACCTTaGACAGTTAGAAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGKRAAP*TVRKLS
Trigger: CGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTT...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCTTGTTATGCCGCTGTTaGCTTGCCAGCAAGATCCCC +
Preference number: 5 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFILLCRC*LASKIP
Trigger: GGGGATCTTGCTGGCAAGCAAACAGCGGCATAACAA...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGATGTCTCCTTTCAGTaGAATCTGCCCAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGDVSFQ*NLPNSL
Trigger: CAAGGAGTTGGGCAGATTCAACTGAAAGGAGACATC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACACATCCCTGAGTCTTaGGCTAGTTCAGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGHIPES*ASSGWA
Trigger: AGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGACAGTCTGGAAAGTCCTTGACAGTTCACTGCGCACCTCCCCTGGACACTGCTGCCACCATCAACATATaGTACAGATTCCTATCAACA +
Preference number: 5 (lower is better)
Translates to: RQSGKSLTVHCAPPLDTAATINI*YRFLST
Trigger: TGTTGATAGGAATCTGTACAATATGTTGATGGTGGC...AGCAGTGTCCAGGGGAGGTGCGCAGTGAACTGTCAAGGACTTTCCAGACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCTTACTAATGCATAATTaGGCAGGAGCTGGTGATTGG +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSLLMHN*AGAGDW
Trigger: CCAATCACCAGCTCCTGCCAAATTATGCATTAGTAA...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCATGTCAGACCCAGCCTaGGCTTCCACACAACTTCAC +
Preference number: 5 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIMSDPA*ASTQLH
Trigger: GTGAAGTTGTGTGGAAGCCAAGGCTGGGTCTGACAT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAGAGTGGATGAGATACTaGAACATTCAAGGAGACTAC +
Preference number: 5 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQEWMRY*NIQGDY
Trigger: GTAGTCTCCTTGAATGTTCAAGTATCTCATCCACTC...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTAGGGGCGCCTTCCTCTaGCGGGCCAACGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RVTRTKIMQNDKAYWQITRGAFL*RANVLR
Trigger: CCTGAGCACGTTGGCCCGCAAGAGGAAGGCGCCCCT...AGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS TCA 90 bp GTTTGCTTGCCAGCAAGATCCCCTGATACTCTTCCAGTTGTCTCATaGAGCTTGGGTTGGGCTTGGTTACCGTTCGTCTTTCTTTCACAT +
Preference number: 5 (lower is better)
Translates to: VCLPARSPDTLPVVS*SLGWAWLPFVFLSH
Trigger: ATGTGAAAGAAAGACGAACGGTAACCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp GATTCTTCTGATGCATGGGGAGTATTACTCAAAGAGCTGCTTCTCTaGTCATCAGCTGTCACTTTGGAAGGGGCTACTTCTACCACTGAC +
Preference number: 5 (lower is better)
Translates to: DSSDAWGVLLKELLL*SSAVTLEGATSTTD
Trigger: GTCAGTGGTAGAAGTAGCCCCTTCCAAAGTGACAGCTGATGACCAGAGAAGCAGCTCTTTGAGTAATACTCCCCATGCATCAGAAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp GCAAGGCAGTGCACTCCACTGTTACAAATTCTTCCTTACAATCACTaGAAATCTGCCTCCCTGAACCAAGAATCCCAGTTCTGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: ARQCTPLLQILPYNH*KSASLNQESQFCSR
Trigger: TCGAGAGCAGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAGAATTTGTAACAGTGGAGTGCACTGCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCACAGCCAGCCTGATGTaGTCTTCTGGGCGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSTASLM*SSGRSK
Trigger: TTTACTCCGCCCAGAAGACAACATCAGGCTGGCTGT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTGTCAACCCACATTGCCTGCACAGATACAGGTTTGAATATGTGAACTCTGTTACAGCCAGCCTGATGTaGTCTTCTGGGCGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: PVNPHCLHRYRFEYVNSVTASLM*SSGRSK
Trigger: TTTACTCCGCCCAGAAGACAACATCAGGCTGGCTGT...AACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGGTTGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTTGAATTCCCGCAAGTaGCACACCATTTGCATTTCC +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGLNSRK*HTICIS
Trigger: GGAAATGCAAATGGTGTGCAACTTGCGGGAATTCAA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGTGTAAGTCCTCTAAGTaGGAGGCATTCCATTCTGAG +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGCKSSK*EAFHSE
Trigger: CTCAGAATGGAATGCCTCCAACTTAGAGGACTTACA...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCTCATGAAGCTTGGGTaGGGCTTGGTTACCGTTCGT +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLMKLG*GLVTVR
Trigger: ACGAACGGTAACCAAGCCCAACCCAAGCTTCATGAG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGCTGATACTCTTCCAGTaGTCTCATGAAGCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGLILFQ*SHEAWV
Trigger: AACCCAAGCTTCATGAGACAACTGGAAGAGTATCAG...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCACTGTTCCTCATCCATaGAAGATTCTTCTGATGCAT +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSTVPHP*KILLMH
Trigger: ATGCATCAGAAGAATCTTCAATGGATGAGGAACAGT...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCATGATTTCTACCCTCTaGGGAAGGGGAAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFIMISTL*GRGRGT
Trigger: AGTCCCTCTTCCCCTTCCCAAGAGGGTAGAAATCAT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTGCAGAGAAACCTGGTaGGGGTCCAGAGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSCRETW*GSRVLF
Trigger: AAACAGGACTCTGGACCCCAACCAGGTTTCTCTGCA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GTCACTGTTGTTTTCAGTTGGGAGGACACTGCAGAGCACATTTTTCTGGCAGGGGGAGCTCTGGGTAGTTaGCAAAATGAGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: VTVVFSWEDTAEHIFLAGGALGS*QNEKEE
Trigger: TTCCTCTTTCTCATTTTGCAAACTACCCAGAGCTCC...CCCTGCCAGAAAAATGTGCTCTGCAGTGTCCTCCCAACTGAAAACAACAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp CTTCTCACTGGTGGCTATTTCACTCCCTGGCCCAGTGTGATTGGGTaGTGTAACTATGTGGGTATATTCAATGATTTCTACCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LLTGGYFTPWPSVIG*CNYVGIFNDFYPLG
Trigger: CCCAAGAGGGTAGAAATCATTGAATATACCCACATAGTTACATCACCCAATCACACTGGGCCAGGGAGTGAAATAGCCACCAGTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 90 bp TCTCCGCTCTTCTCACTGGTGGCTATTTCACTCCCTGGCCCAGTGTaGTTGGGTGATGTAACTATGTGGGTATATTCAATGATTTCTACC +
Preference number: 5 (lower is better)
Translates to: SPLFSLVAISLPGPV*LGDVTMWVYSMIST
Trigger: GGTAGAAATCATTGAATATACCCACATAGTTACATCACCCAATCACACTGGGCCAGGGAGTGAAATAGCCACCAGTGAGAAGAGCGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 90 bp CTTGCTTTAGGGAACTTAAAAGGAGGGAGAATTGGAGAAAGTCACTaGCTCACCTTGCCAGCAAGATCCCCTGATACTCTTCCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: LALGNLKGGRIGESH*LTLPARSPDTLPVV
Trigger: GACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGGTGAGTCAGTGACTTTCTCCAATTCTCCCTCCTTTTAAGTTCCCTAAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394848.5
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGAGATCGCCTGCATGCTaGTTCCGTCTGTGGCTGATT +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKRSPAC*FRLWLI
Trigger: AATCAGCCACAGACGGAACAAGCATGCAGGCGATCT...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTTGTTCCTTGAATCCCTGTGCTTGGAGATGCTGTaGGAGATCGCCTGCATGCTT +
Preference number: 5 (lower is better)
Translates to: PVHSSTNSTSQCLFLESLCLEML*EIACML
Trigger: AAGCATGCAGGCGATCTCCAACAGCATCTCCAAGCA...CAGGGATTCAAGGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAAGCTTGGGTTGGGCTaGGTTACCGTTCGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGKLGLG*VTVRLS
Trigger: AGAAAGACGAACGGTAACCAAGCCCAACCCAAGCTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAGGTGTATGGCATGGGTaGGGTAAGATGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGGVWHG*GKMSPF
Trigger: GAAAGGAGACATCTTACCCAACCCATGCCATACACC...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTCCATATGTCCAGGTTaGTTCTCTGGAGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKSICPG*FSGVWA
Trigger: GGCCCAGACTCCAGAGAACAAACCTGGACATATGGA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCATGATTTCTACCCTCTaGGGAAGGGGAAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSMISTL*GRGRGT
Trigger: AGTCCCTCTTCCCCTTCCCAAGAGGGTAGAAATCAT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCCACCAAAACTATATGATAAATTaGCAGAGCCGGCCATTATCA +
Preference number: 5 (lower is better)
Translates to: AHFSGRESQDAHLCGSHQNYMIN*QSRPLS
Trigger: TGATAATGGCCGGCTCTGCAAATTTATCATATAGTT...TTGGTGGGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTCAAACATGTCACTGTaGTTTTCAGTTGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPISNMSL*FSVGRT
Trigger: TGTCCTCCCAACTGAAAACAACAGTGACATGTTTGA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCCAGCTTTATCACTTCCTGGCTGTGGTaGAGATACTGGCAAACAATG +
Preference number: 5 (lower is better)
Translates to: KPNHHHKGRGTSPIPSFITSWLW*RYWQTM
Trigger: CATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGT...GATAAAGCTGGGGATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACCTTTTCTGCATCTTTaGGGTCGCCCTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGPFLHL*GRPAIC
Trigger: GCAGATGGCAGGGCGACCCAAAAGATGCAGAAAAGG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCAGAGCACATTTTTCTGGCAGGGAGAGCCAAGATGCCCATCTGTGTGGATCCGGTTTTGTCCCATCTTaGTTGTTATTTAATGCAGTG +
Preference number: 5 (lower is better)
Translates to: CRAHFSGRESQDAHLCGSGFVPS*LLFNAV
Trigger: CACTGCATTAAATAACAACAAAGATGGGACAAAACC...GGATCCACACAGATGGGCATCTTGGCTCTCCCTGCCAGAAAAATGTGCTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCCCACTGTCTGCCTCATaGGAATCAGTAAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPIPLSAS*ESVKIS
Trigger: AGAAATCTTTACTGATTCCAATGAGGCAGACAGTGG...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540801.6
CDS GCA 90 bp CTCCAAGCAGATCATTCTTTCTTTGGTACACAGGCCTTTCTGATTTaGATCTTGTGGGACCATATGTTCCACAAAGACAGGAGGTATGGG +
Preference number: 5 (lower is better)
Translates to: LQADHSFFGTQAFLI*ILWDHMFHKDRRYG
Trigger: CCCATACCTCCTGTCTTTGTGGAACATATGGTCCCACAAGATGCAAATCAGAAAGGCCTGTGTACCAAAGAAAGAATGATCTGCTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS GCA 90 bp CCATTGAAGATTCTTCTGATGCATGGGGAGTATTACTCAAAGAGCTaGTTCTCTGGTCATCAGCTGTCACTTTGGAAGGGGCTACTTCTA +
Preference number: 5 (lower is better)
Translates to: PLKILLMHGEYYSKS*FSGHQLSLWKGLLL
Trigger: TAGAAGTAGCCCCTTCCAAAGTGACAGCTGATGACCAGAGAAGCAGCTCTTTGAGTAATACTCCCCATGCATCAGAAGAATCTTCAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp CATTCAAGATATACCGTACCCCTCGGTTCTGTAAGTCCTCTAAGTTaGAGGCATTCCATTCTGAGCCCAGGAACACATGCTCAAATATCT +
Preference number: 5 (lower is better)
Translates to: HSRYTVPLGSVSPLS*RHSILSPGTHAQIS
Trigger: AGATATTTGAGCATGTGTTCCTGGGCTCAGAATGGAATGCCTCCAACTTAGAGGACTTACAGAACCGAGGGGTACGGTATATCTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CCA 90 bp GATCATTCTTTCTTTGGTACACAGGCCTTTCTGATTTGCATCTTGTaGGACCATATGTTCCACAAAGACAGGAGGTATGGGTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: DHSFFGTQAFLICIL*DHMFHKDRRYGWVT
Trigger: AGTCACCCACCCATACCTCCTGTCTTTGTGGAACATATGGTCCCACAAGATGCAAATCAGAAAGGCCTGTGTACCAAAGAAAGAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGCGACTTCACAAGCCTaGTGTAAGCTCTGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKATSQA*CKLCSA
Trigger: TGCACTACAGAGCTTACACAAGGCTTGTGAAGTCGC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCAGCCATATTCCTTCATaGCATAGGCAATCACGGTGG +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSSHIPS*HRQSRW
Trigger: CCACCGTGATTGCCTATGCAATGAAGGAATATGGCT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATCCATATGTCCAGGTTaGTTCTCTGGAGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: CICIFLSAVISQKPVSSLSICPG*FSGVWA
Trigger: GGCCCAGACTCCAGAGAACAAACCTGGACATATGGA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGACTAGAACCAAATTCTTaGGCATACTGCACAAGGGGC +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGLEPNS*AYCTRG
Trigger: GCCCCTTGTGCAGTATGCCAAAGAATTTGGTTCTAG...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAACTTCCTGGCTGTGGTaGAGATACTGGCAAACAATG +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGTSWLW*RYWQTM
Trigger: CATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAAACTTTGGTCCTGCTaGTACCTCTTAGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGKLWSC*YLLVCG
Trigger: CCCACACACTAAGAGGTACAAGCAGGACCAAAGTTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp TACGCCAGGAGATCCGTTGCCTCTTCATCATATACCCGAATGTTATaGTACTCAAAGACTCCTGGGAAGAAGTTATCTATCTCTCGAGTG +
Preference number: 5 (lower is better)
Translates to: YARRSVASSSYTRML*YSKTPGKKLSISRV
Trigger: CACTCGAGAGATAGATAACTTCTTCCCAGGAGTCTTTGAGTATCATAACATTCGGGTATATGATGAAGAGGCAACGGATCTCCTGGCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS TCA 90 bp AAGTCATCTTACCACATTGCCTGCACAGATACAGGTTTGAATATGTaGACTCTGTTATCCGTCGATACACTGAACCCACCATCACCATCC +
Preference number: 5 (lower is better)
Translates to: KSSYHIACTDTGLNM*TLLSVDTLNPPSPS
Trigger: GGATGGTGATGGTGGGTTCAGTGTATCGACGGATAACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGTAAGATGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577483.1
CDS CCA 90 bp ATTGCCTTTGACTGTTCCTCATCCATTGAAGATTCTTCTGATGCATaGGGAGTATTACTCAAAGAGCTGCTTCTCTGGTCATCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: IAFDCSSSIEDSSDA*GVLLKELLLWSSAV
Trigger: GACAGCTGATGACCAGAGAAGCAGCTCTTTGAGTAATACTCCCCATGCATCAGAAGAATCTTCAATGGATGAGGAACAGTCAAAGGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp ATGGTACAAGTGCTACTGTCATTAGAGGAGAAATCCATTCCTAGGACGATGCTTAAAAGGGCAGCACCTTaGACAGTTAGAAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: MVQVLLSLEEKSIPRTMLKRAAP*TVRKLS
Trigger: CGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTT...AAGCATCGTCCTAGGAATGGATTTCTCCTCTAATGACAGTAGCACTTGTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGATGTAAGTCCTCTAAGTaGGAGGCATTCCATTCTGAG +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGCKSSK*EAFHSE
Trigger: CTCAGAATGGAATGCCTCCAACTTAGAGGACTTACA...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGTGGTGATATCCTTCTaGTTGAGTTCTAGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKVVISF*LSSSPG
Trigger: ACCTGGGCTAGAACTCAACAAGAAGGATATCACCAC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCAGGTCTGGAAACCAAACCATCATCACAAAGGCAGGGGAACATCTCCAATCTTGGATGCATGGCAATaGTCAAGAGGAAATTTTGAT +
Preference number: 5 (lower is better)
Translates to: PQVWKPNHHHKGRGTSPILDAWQ*SRGNFD
Trigger: ATCAAAATTTCCTCTTGACAATTGCCATGCATCCAA...GATTGGAGATGTTCCCCTGCCTTTGTGATGATGGTTTGGTTTCCAGACCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCAATCTGCCCAACTCCTaGACTGATGGACTCAATTTC +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSNLPNS*TDGLNF
Trigger: GAAATTGAGTCCATCAGTCAAGGAGTTGGGCAGATT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAATCTGCCCAACTCCTaGACTGATGGACTCAATTTC +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGNLPNS*TDGLNF
Trigger: GAAATTGAGTCCATCAGTCAAGGAGTTGGGCAGATT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATGTTCTACAAAAGACTaGGTGGGCTCTGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: CICIFLSAVISQKPVSSLCSTKD*VGSGLW
Trigger: CCACAACCCAGAGCCCACCAAGTCTTTTGTAGAACA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACCCTTCCCCATCATATaGGTGGTGGAACTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: CICIFLSAVISQKPVSSLPFPII*VVELLQ
Trigger: TTGAAGCAGTTCCACCACCAATATGATGGGGAAGGG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGGGTTTTGTCCCATCTTaGTTGTTATTTAATGCAGTG +
Preference number: 5 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWGFVPS*LLFNAV
Trigger: CACTGCATTAAATAACAACAAAGATGGGACAAAACC...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AGCTTCCACTCTGGGCAACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGTTTTCCTATTCATCTTaGCCAGTCTATCAAATCTGC +
Preference number: 5 (lower is better)
Translates to: SFHSGQLTYTSWLWLRYWFSYSS*PVYQIC
Trigger: GCAGATTTGATAGACTGGCAAAGATGAATAGGAAAA...CCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGTTGCCCAGAGTGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCGCTGATGAGCTGGTaGATGGCGTTCTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: ELLGQRSCKMIRHIGKSLSLMSW*MAFCEM
Trigger: CATCTCGCAGAACGCCATCAACCAGCTCATCAGCGA...GAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324677.12
CDS-3UTR CAA 90 bp CTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGACCCTGTCAACCCACATaGCCTGCACAGATACAGGTT +
Preference number: 5 (lower is better)
Translates to: LGQRSCKMIRHIGKSLSRPCQPT*PAQIQV
Trigger: AACCTGTATCTGTGCAGGCAATGTGGGTTGACAGGG...TCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CAA 90 bp CAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGCTCACACCAGATTGGGGATaGGTGGGAGAATGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: QSIIIYCRLENCSRSQWLTPDWG*VGEWGG
Trigger: TCCTCCCCATTCTCCCACCAATCCCCAATCTGGTGT...GAGCCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS TCA 90 bp GTAAACTCCAAGCAGATCATTCTTTCTTTGGTACACAGGCCTTTCTaGTTTGCATCTTGTGGGACCATATGTTCCACAAAGACAGGAGGT +
Preference number: 5 (lower is better)
Translates to: VNSKQIILSLVHRPF*FASCGTICSTKTGG
Trigger: ACCTCCTGTCTTTGTGGAACATATGGTCCCACAAGATGCAAATCAGAAAGGCCTGTGTACCAAAGAAAGAATGATCTGCTTGGAGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTGTAACTCCCCAGTGTaGTCACCAAGTTTGCTAATT +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSCNSPV*SPSLLI
Trigger: AATTAGCAAACTTGGTGACAACACTGGGGAGTTACA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTCTACAGAAGACCACTaGGATTTCATTTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKSTEDH*DFIWGP
Trigger: AGGACCCCAAATGAAATCCAAGTGGTCTTCTGTAGA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGAGTGGATGAGATACTaGAACATTCAAGGAGACTAC +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSEWMRY*NIQGDY
Trigger: GTAGTCTCCTTGAATGTTCAAGTATCTCATCCACTC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAAAATCAAGAAAGGGTaGGGGTTTCCCTTTCTACTG +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGKIKKG*GFPFLL
Trigger: CAGTAGAAAGGGAAACCCCAACCCTTTCTTGATTTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CTACAGTCAATAATAATATATTGTAGACTTGAAAATTGTAGCCGGTCACAGTGGACACCAGATTGGGGATaGGTGGGAGAATGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LQSIIIYCRLENCSRSQWTPDWG*VGEWGG
Trigger: TCCTCCCCATTCTCCCACCAATCCCCAATCTGGTGT...CCACTGTGACCGGCTACAATTTTCAAGTCTACAATATATTATTATTGACTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000582084.1
ENST00000590153.1
CDS TCA 90 bp TATGATACTCAAAGACTCCTGGGAAGAAGTTATCTATCTCTCGAGTaGCATTCAAGATATACCGTACCCCTCGGTTCTGTAAGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: YDTQRLLGRSYLSLE*HSRYTVPLGSVSPL
Trigger: TAGAGGACTTACAGAACCGAGGGGTACGGTATATCTTGAATGTCACTCGAGAGATAGATAACTTCTTCCCAGGAGTCTTTGAGTATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS TCA 90 bp GTTAAGTCTGGAAACTTGTTGGCCATTTCTGGGACATGTCCAGGCTaGATTAAGGCTTTGGATGCATGGCAATTGTCAAGAGGAAATTTT +
Preference number: 5 (lower is better)
Translates to: VKSGNLLAISGTCPG*IKALDAWQLSRGNF
Trigger: AAAATTTCCTCTTGACAATTGCCATGCATCCAAAGCCTTAATTCAGCCTGGACATGTCCCAGAAATGGCCAACAAGTTTCCAGACTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 90 bp GTTAAGTCTCTGCCAGAGCCTAAGAATAACACCTCTGAATTCCTCTaGATTTCACTTGTTCACCAATACTCAAGGCCTTCCAATTGCAAC +
Preference number: 5 (lower is better)
Translates to: VKSLPEPKNNTSEFL*ISLVHQYSRPSNCN
Trigger: GTTGCAATTGGAAGGCCTTGAGTATTGGTGAACAAGTGAAATTCAGAGGAATTCAGAGGTGTTATTCTTAGGCTCTGGCAGAGACTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577483.1
CDS CCA 90 bp ACTTGTTGGCCATTTCTGGGACATGTCCAGGCTGAATTAAGGCTTTaGATGCATGGCAATTGTCAAGAGGAAATTTTGATTCATTCAGAC +
Preference number: 5 (lower is better)
Translates to: TCWPFLGHVQAELRL*MHGNCQEEILIHSD
Trigger: GTCTGAATGAATCAAAATTTCCTCTTGACAATTGCCATGCATCCAAAGCCTTAATTCAGCCTGGACATGTCCCAGAAATGGCCAACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp ACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCAAAAGGGCAGCACCTTaGACAGTTAGAAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: TKIMQNDKAYWQITLQKGKRAAP*TVRKLS
Trigger: CGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTT...GCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CAA 90 bp AGAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTTGCTTGGAGATGCTGTaGGAGATCGCCTGCATGCTT +
Preference number: 5 (lower is better)
Translates to: RVTRTKIMQNDKAYWQITCLEML*EIACML
Trigger: AAGCATGCAGGCGATCTCCAACAGCATCTCCAAGCA...AGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CAA 90 bp AGAGTTACTAGGACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTACAGCCAGCCTGATGTaGTCTTCTGGGCGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: RVTRTKIMQNDKAYWQITTASLM*SSGRSK
Trigger: TTTACTCCGCCCAGAAGACAACATCAGGCTGGCTGT...AGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGTCCTAGTAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CAA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTATTGAATTCCCGCAAGTaGCACACCATTTGCATTTCC +
Preference number: 5 (lower is better)
Translates to: CICIFLSAVISQKPVSSLLNSRK*HTICIS
Trigger: GGAAATGCAAATGGTGTGCAACTTGCGGGAATTCAA...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAACGCCAGGAGATCCGTaGCCTCTTCATCATATACCC +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTTPGDP*PLHHIP
Trigger: GGGTATATGATGAAGAGGCAACGGATCTCCTGGCGT...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCACTGTTCCTCATCCATaGAAGATTCTTCTGATGCAT +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSTVPHP*KILLMH
Trigger: ATGCATCAGAAGAATCTTCAATGGATGAGGAACAGT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACCACTGTATTTCCCTTaGCCTTTGCTCATTTCTGGT +
Preference number: 5 (lower is better)
Translates to: CICIFLSAVISQKPVSSLPLYFP*PLLISG
Trigger: ACCAGAAATGAGCAAAGGCAAAGGGAAATACAGTGG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGACCACTGTATTTCCCTTaGCCTTTGCTCATTTCTGGT +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGPLYFP*PLLISG
Trigger: ACCAGAAATGAGCAAAGGCAAAGGGAAATACAGTGG...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCCCACTTGGATTTCATTaGGGGTCCTGTTTTAATTTC +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSPLGFH*GSCFNF
Trigger: GAAATTAAAACAGGACCCCAAATGAAATCCAAGTGG...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGCACACTGACTTTCGATaGCTGCTTTTCAAACATGTC +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKHTDFR*LLFKHV
Trigger: GACATGTTTGAAAAGCAGCAATCGAAAGTCAGTGTG...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGTCTGTGTTTTCCAGTaGCAACTCTACTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKVCVFQ*QLYSFL
Trigger: TAAGAAGGAGTAGAGTTGCAACTGGAAAACACAGAC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGTTACTAATGCATAATTaGGCAGGAGCTGGTGATTGG +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKLLMHN*AGAGDW
Trigger: CCAATCACCAGCTCCTGCCAAATTATGCATTAGTAA...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGGAGCTCTGGGTAGTTaGCAAAATGAGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGGALGS*QNEKEE
Trigger: TTCCTCTTTCTCATTTTGCAAACTACCCAGAGCTCC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCCACAGTGTTTGTTCCTaGAATCCCTGTCAACCCACA +
Preference number: 5 (lower is better)
Translates to: TKIMQNDKAYWQITLQKGHSVCS*NPCQPT
Trigger: TGTGGGTTGACAGGGATTCAAGGAACAAACACTGTG...GCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CAA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTCACAGTGTTTGTTCCTaGAATCCCTGTCAACCCACA +
Preference number: 5 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKAHSVCS*NPCQPT
Trigger: TGTGGGTTGACAGGGATTCAAGGAACAAACACTGTG...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS-3UTR CAA 90 bp CCAGTTCATTCTTCCACCAATAGTACATCACAGTGTTTGTTCCTTGAATCCCTGAGTACATCACAGTGTTaGTTCCTTGAATCCCTGTCA +
Preference number: 5 (lower is better)
Translates to: PVHSSTNSTSQCLFLESLSTSQC*FLESLS
Trigger: TGACAGGGATTCAAGGAACAAACACTGTGATGTACT...CAGGGATTCAAGGAACAAACACTGTGATGTACTATTGGTGGAAGAATGAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579040.5
CDS-3UTR CAA 90 bp AGGAATTCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTTGAATTTCTCCAGCCTTTGCTaGAATATTTCCAGCAATGTG +
Preference number: 5 (lower is better)
Translates to: RNSLYHLPGKMFSSLCLNFSSLC*NISSNV
Trigger: CACATTGCTGGAAATATTCAAGCAAAGGCTGGAGAA...ATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS GCA 90 bp TCCAGCCTTTGCTTGAATATTTCCAGCAATGTGCACTCACTATTTTaGAAGGCAGTGCACTCCACTGTTACAAATTCTTCCTTACAATCA +
Preference number: 5 (lower is better)
Translates to: SSLCLNISSNVHSLF*KAVHSTVTNSSLQS
Trigger: TGATTGTAAGGAAGAATTTGTAACAGTGGAGTGCACTGCCTTGCAAAATAGTGAGTGCACATTGCTGGAAATATTCAAGCAAAGGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACGACTCACCCCCATTTaGCAGTGCACAAGGCATTTA +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTRLTPI*QCTRHL
Trigger: TAAATGCCTTGTGCACTGCAAAATGGGGGTGAGTCG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGATTTCTGATTTGCATCTaGTGGGACCATATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGFLICI*WDHMFH
Trigger: GTGGAACATATGGTCCCACAAGATGCAAATCAGAAA...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCTTGGATGCATGGCAATaGTCAAGAGGAAATTTTGAT +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSLDAWQ*SRGNFD
Trigger: ATCAAAATTTCCTCTTGACAATTGCCATGCATCCAA...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAGTTCTGAAATTGCCTTaGACTGTTCCTCATCCATTG +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGVLKLP*TVPHPL
Trigger: CAATGGATGAGGAACAGTCAAAGGCAATTTCAGAAC...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAGGATGCTGTTCTTCTTaGGTGTATGGCATGGGTTGG +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTGCCSS*VYGMGW
Trigger: CCAACCCATGCCATACACCAAAGAAGAACAGCATCC...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCGTGTTGTCACCAAGTTaGCTAATTAAACTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSVLSPS*LIKLRS
Trigger: AGACCTAAGTTTAATTAGCAAACTTGGTGACAACAC...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGATGTAACTCCCCAGTGTaGTCACCAAGTTTGCTAATT +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGCNSPV*SPSLLI
Trigger: AATTAGCAAACTTGGTGACAACACTGGGGAGTTACA...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp AAATCCTCAGATGAAACAGGTGAACACTTCTGTGACCTGCTACATCTCAGAAGCAACAGCAATTTGCCTTaGATAAAGGTGTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: KSSDETGEHFCDLLHLRSNSNLP*IKVFSE
Trigger: TTCAGAGAACACCTTTATCAAAGGCAAATTGCTGTT...GCTTCTGAGATGTAGCAGGTCACAGAAGTGTTCACCTGTTTCATCTGAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp ACTCACATATACTTCCTGGCTGTGGTTGAGATACTGGCAAACAATGTTCTGGGAAACTATATGATAAATTaGCAGAGCCGGCCATTATCA +
Preference number: 5 (lower is better)
Translates to: THIYFLAVVEILANNVLGNYMIN*QSRPLS
Trigger: TGATAATGGCCGGCTCTGCAAATTTATCATATAGTT...TCCCAGAACATTGTTTGCCAGTATCTCAACCACAGCCAGGAAGTATATGTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAAAAATCAAGAAAGGGTaGGGGTTTCCCTTTCTACTG +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGKIKKG*GFPFLL
Trigger: CAGTAGAAAGGGAAACCCCAACCCTTTCTTGATTTT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TCTTTATACCACCTCCCAGGCAAAATGTTCTCCAGCCTTTGCTTGAATATTTCCAATGTTCTCCAGCCTTaGCTTGAATATTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SLYHLPGKMFSSLCLNISNVLQP*LEYFQQ
Trigger: TTGCTGGAAATATTCAAGCAAAGGCTGGAGAACATT...GGAAATATTCAAGCAAAGGCTGGAGAACATTTTGCCTGGGAGGTGGTATAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS-3UTR CAA 90 bp ACCCTGGATCAATATAGGTATCAATTCAGAAAATTCACACCAGATTGGGGATTGAAAATTCACACCAGATaGGGGATTGGTGGGAGAATG +
Preference number: 5 (lower is better)
Translates to: TLDQYRYQFRKFTPDWGLKIHTR*GIGGRM
Trigger: CATTCTCCCACCAATCCCCAATCTGGTGTGAATTTT...CAATCCCCAATCTGGTGTGAATTTTCTGAATTGATACCTATATTGATCCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS-3UTR CAA 90 bp GGGAAAGATGCCACTGGAGATTATAAAAGTCTGAAGAGAAGACAGTCTGGAAAGGTGTTGTCACCAAGTTaGCTAATTAAACTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: GKDATGDYKSLKRRQSGKVLSPS*LIKLRS
Trigger: AGACCTAAGTTTAATTAGCAAACTTGGTGACAACAC...CTTTCCAGACTGTCTTCTCTTCAGACTTTTATAATCTCCAGTGGCATCTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TGCATTTGTATTTTCCTCAGTGCTGTGATAAGCCAAAAACCTGTCTCCAGTCTACCACTTGGATTTCATTaGGGGTCCTGTTTTAATTTC +
Preference number: 5 (lower is better)
Translates to: CICIFLSAVISQKPVSSLPLGFH*GSCFNF
Trigger: GAAATTAAAACAGGACCCCAAATGAAATCCAAGTGG...TAGACTGGAGACAGGTTTTTGGCTTATCACAGCACTGAGGAAAATACAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CCTCCTCAGAACCAGGAAAATACTAAAGATCCTGAAGAGACTAAGATGATAGGAAACTCCTTGGCATGGTaGAATGACAGATATTCTGTA +
Preference number: 5 (lower is better)
Translates to: PPQNQENTKDPEETKMIGNSLAW*NDRYSV
Trigger: TACAGAATATCTGTCATTCAACCATGCCAAGGAGTT...TCCTATCATCTTAGTCTCTTCAGGATCTTTAGTATTTTCCTGGTTCTGAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp CAAAGATCATGCAAAATGATAAGGCATATTGGCAAATCACTCTCCAGAAAGGCTAGTACATCACAGTGTTaGTTCCTTGAATCCCTGTCA +
Preference number: 5 (lower is better)
Translates to: QRSCKMIRHIGKSLSRKASTSQC*FLESLS
Trigger: TGACAGGGATTCAAGGAACAAACACTGTGATGTACT...AGCCTTTCTGGAGAGTGATTTGCCAATATGCCTTATCATTTTGCATGATCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000579040.5
CDS GCA 90 bp ATGCAAAGCATCTGGCATGTAGTAAATAGCCCTGAAATGTCCATATaGCAGCTGATGGTTATTAGCAAGTATAATGTTTTCTCTAGGCTT +
Preference number: 5 (lower is better)
Translates to: MQSIWHVVNSPEMSI*QLMVISKYNVFSRL
Trigger: AAGCCTAGAGAAAACATTATACTTGCTAATAACCATCAGCTGGCATATGGACATTTCAGGGCTATTTACTACATGCCAGATGCTTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577483.1
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACTGATACTCTTCCAGTaGTCTCATGAAGCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTLILFQ*SHEAWV
Trigger: AACCCAAGCTTCATGAGACAACTGGAAGAGTATCAG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATGTAGGGCTATCCATTaGACCAAGGATCACTATCAT +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTCRAIH*TKDHYH
Trigger: ATGATAGTGATCCTTGGTCAAATGGATAGCCCTACA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATTTCTGATTTGCATCTaGTGGGACCATATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTFLICI*WDHMFH
Trigger: GTGGAACATATGGTCCCACAAGATGCAAATCAGAAA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAGTCTGTGTTTTCCAGTaGCAACTCTACTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTVCVFQ*QLYSFL
Trigger: TAAGAAGGAGTAGAGTTGCAACTGGAAAACACAGAC...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp GAGGAAATTTTGATTCATTCAGACAACACCCTGATGAGCATCCATTaGTGTCATTTAAGTTTAATTCATCCTCAATCTGTCCAGCATGAA +
Preference number: 5 (lower is better)
Translates to: EEILIHSDNTLMSIH*CHLSLIHPQSVQHE
Trigger: TTCATGCTGGACAGATTGAGGATGAATTAAACTTAAATGACATCAATGGATGCTCATCAGGGTGTTGTCTGAATGAATCAAAATTTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACACTCTGTTGTTGTGAGTaGTTCTACAAAAGACTTGGT +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTLCCCE*FYKRLG
Trigger: ACCAAGTCTTTTGTAGAACAACTCACAACAACAGAG...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACAGCCACCATCAACATATaGTACAGATTCCTATCAACA +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTATINI*YRFLST
Trigger: TGTTGATAGGAATCTGTACAATATGTTGATGGTGGC...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 90 bp CCATTGATGTCATTTAAGTTTAATTCATCCTCAATCTGTCCAGCATaGAATTCCCTAGAAGTAAACTCCAAGCAGATCATTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: PLMSFKFNSSSICPA*NSLEVNSKQIILSL
Trigger: CAAAGAAAGAATGATCTGCTTGGAGTTTACTTCTAGGGAATTTCATGCTGGACAGATTGAGGATGAATTAAACTTAAATGACATCAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS-3UTR CAA 90 bp TTAACCAATAAAGTGCATGTTCCTTACATATTACACCTGCCCCTTTTACAAACATTTTCCTATTCATCTTaGCCAGTCTATCAAATCTGC +
Preference number: 5 (lower is better)
Translates to: LTNKVHVPYILHLPLLQTFSYSS*PVYQIC
Trigger: GCAGATTTGATAGACTGGCAAAGATGAATAGGAAAA...TGTTTGTAAAAGGGGCAGGTGTAATATGTAAGGAACATGCACTTTATTGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269033.7
ENST00000540801.6
CDS TCA 72 bp CGCAGACTCCGCACCCACCACCAGACTGTCGCCGACTaGCGCTCCGAACGGGCGGCGGGCGGGCGGTTCCGC +
Preference number: 6 (lower is better)
Translates to: RRLRTHHQTVAD*RSERAAGGRFR
Trigger: GCGGAACCGCCCGCCCGCCGCCCGTTCGGAGCGTCAGTCGGCGACAGTCTGGTGGTGGGTGCGGAGTCTGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540801.6
ENST00000590153.1
CDS TCA 72 bp GCGGCGGGCGGGCGGTTCCGCAGCTGCGGGGCACAATaGGCGCTCCCAGTGCGCAGGCGCCACCTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: AAGGRFRSCGAQ*ALPVRRRHLSA
Trigger: AGCTGACAGGTGGCGCCTGCGCACTGGGAGCGCTCATTGTGCCCCGCAGCTGCGGAACCGCCCGCCCGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS TCA 72 bp GGGCAGGGCATTCTTGTCCACCAGACTGTCGCCGACTaGCGCTCCGAACGGGCGGCGGGCGGGCGGTTCCGC +
Preference number: 6 (lower is better)
Translates to: GQGILVHQTVAD*RSERAAGGRFR
Trigger: GCGGAACCGCCCGCCCGCCGCCCGTTCGGAGCGTCAGTCGGCGACAGTCTGGTGGACAAGAATGCCCTGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS GCA 72 bp GGTTCCGCAGCTGCGGGGCACAATGAGCGCTCCCAGTaGGCAGGCGCCACCTGTCAGCTACCGCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: GSAAAGHNERSQ*AGATCQLPPLP
Trigger: GGGGAGAGGCGGTAGCTGACAGGTGGCGCCTGCGCACTGGGAGCGCTCATTGTGCCCCGCAGCTGCGGAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS CAA 72 bp CCGAGGCTGCAGGTGCAAGCGAGGGGCGCCTTCCTCTaGCGGGCCAACGTGCTCAGGGTCATGGGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: PRLQVQARGAFL*RANVLRVMGPA
Trigger: AGCCGGCCCCATGACCCTGAGCACGTTGGCCCGCAAGAGGAAGGCGCCCCTCGCTTGCACCTGCAGCCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 72 bp GCCGGCTCAAAGTGCACAACTCCGCATCCTGGCCTCTaGTCTGCTCCGGCACGAGGCGCAGGCTGCGCGTGC +
Preference number: 6 (lower is better)
Translates to: AGSKCTTPHPGL*SAPARGAGCAC
Trigger: GCACGCGCAGCCTGCGCCTCGTGCCGGAGCAGAGCAGAGGCCAGGATGCGGAGTTGTGCACTTTGAGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 72 bp CTCAAAGTGCACAACTCCGCATCCTGGCCTCTGCTCTaGTCCGGCACGAGGCGCAGGCTGCGCGTGCACCCG +
Preference number: 6 (lower is better)
Translates to: LKVHNSASWPLL*SGTRRRLRVHP
Trigger: CGGGTGCACGCGCAGCCTGCGCCTCGTGCCGGAGCAGAGCAGAGGCCAGGATGCGGAGTTGTGCACTTTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 72 bp GGCCAACGTGCTCAGGGTCATGGGGCCGGCTCAAAGTaGACAACTCCGCATCCTGGCCTCTGCTCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: GQRAQGHGAGSK*TTPHPGLCSAP
Trigger: CGGAGCAGAGCAGAGGCCAGGATGCGGAGTTGTGCACTTTGAGCCGGCCCCATGACCCTGAGCACGTTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 72 bp TGCAAGCGAGGGGCGCCTTCCTCTTGCGGGCCAACGTaGTCAGGGTCATGGGGCCGGCTCAAAGTGCACAAC +
Preference number: 6 (lower is better)
Translates to: CKRGAPSSCGPT*SGSWGRLKVHN
Trigger: GTTGTGCACTTTGAGCCGGCCCCATGACCCTGAGCACGTTGGCCCGCAAGAGGAAGGCGCCCCTCGCTTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 72 bp AGTAAGGAATCATGTCGGGGCCACCGAGGCTGCAGGTaGAAGCGAGGGGCGCCTTCCTCTTGCGGGCCAACG +
Preference number: 6 (lower is better)
Translates to: SKESCRGHRGCR*KRGAPSSCGPT
Trigger: CGTTGGCCCGCAAGAGGAAGGCGCCCCTCGCTTGCACCTGCAGCCTCGGTGGCCCCGACATGATTCCTTACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 72 bp CGGAGAAGTAAGGAATCATGTCGGGGCCACCGAGGCTaGAGGTGCAAGCGAGGGGCGCCTTCCTCTTGCGGG +
Preference number: 6 (lower is better)
Translates to: RRSKESCRGHRG*RCKRGAPSSCG
Trigger: CCCGCAAGAGGAAGGCGCCCCTCGCTTGCACCTGCAGCCTCGGTGGCCCCGACATGATTCCTTACTTCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS CCA 72 bp GCGCCTTCCTCTTGCGGGCCAACGTGCTCAGGGTCATaGGGCCGGCTCAAAGTGCACAACTCCGCATCCTGG +
Preference number: 6 (lower is better)
Translates to: APSSCGPTCSGS*GRLKVHNSASW
Trigger: CCAGGATGCGGAGTTGTGCACTTTGAGCCGGCCCCATGACCCTGAGCACGTTGGCCCGCAAGAGGAAGGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS GCA 72 bp CGCCTCACAGACCCAGGGTACCACTTGGCACCTGGGTaGATCCCTGAGCCCTGGAGCTCTTGTTCCCCCTCA +
Preference number: 6 (lower is better)
Translates to: RLTDPGYHLAPG*IPEPWSSCSPS
Trigger: TGAGGGGGAACAAGAGCTCCAGGGCTCAGGGATGCACCCAGGTGCCAAGTGGTACCCTGGGTCTGTGAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS GCA 72 bp TGGAAATCTGCCTCCCTGAACCAAGAATCCCAGTTCTaGTCTCGAGGCGCAGGGGCTGGAGGTGGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: WKSASLNQESQF*SRGAGAGGGAG
Trigger: CCCAGCACCACCTCCAGCCCCTGCGCCTCGAGAGCAGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS CCA 72 bp CTTGCTCCTGCCGTAAGCGCTCTTCGAACTCCAAGGTaGCTCGCCTCACAGACCCAGGGTACCACTTGGCAC +
Preference number: 6 (lower is better)
Translates to: LAPAVSALRTPR*LASQTQGTTWH
Trigger: GTGCCAAGTGGTACCCTGGGTCTGTGAGGCGAGCCACCTTGGAGTTCGAAGAGCGCTTACGGCAGGAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp CTGGACCGTGACCAAAGCCATCTAGGCGCTGCTGGGTaGTTCCGGGCAGGGCATTCTTGTCCTGAGTGTGGG +
Preference number: 6 (lower is better)
Translates to: LDRDQSHLGAAG*FRAGHSCPECG
Trigger: CCCACACTCAGGACAAGAATGCCCTGCCCGGAACAACCCAGCAGCGCCTAGATGGCTTTGGTCACGGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000577483.1
ENST00000578411.1
ENST00000579040.5
ENST00000579954.1
ENST00000590153.1
CDS CAA 72 bp CTGGACCGTGACCAAAGCCATCTAGGCGCTGCTGGGTaGTTCCGGGCAGGGCATTCTTGTCCACCAGACTGT +
Preference number: 6 (lower is better)
Translates to: LDRDQSHLGAAG*FRAGHSCPPDC
Trigger: ACAGTCTGGTGGACAAGAATGCCCTGCCCGGAACAACCCAGCAGCGCCTAGATGGCTTTGGTCACGGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582084.1
CDS TCA 72 bp TCCTGCTGTGTTCCAGTATCTGACCCTGGGCCCTCCTaGGGATCTGGCAAGTGGTCAAACTCCAGCACCCTG +
Preference number: 6 (lower is better)
Translates to: SCCVPVSDPGPS*GSGKWSNSSTL
Trigger: CAGGGTGCTGGAGTTTGACCACTTGCCAGATCCTCAGGAGGGCCCAGGGTCAGATACTGGAACACAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp GAGTGTGTGGTTAGGCAGCCTTCTGGGTTGCACATCCCTGAGTCTTaGGCTAGTTCAGGCTGGGCTGTGCAGGAGTCCTCATCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: ECVVRQPSGLHIPES*ASSGWAVQESSSCS
Trigger: GGAGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCCAGAAGGCTGCCTAACCACACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp TGGTCAGTGGGTCTGTTGTGCTCAGGGGAGGAAGAATaGGGCAGAGGTAGCACTTGGGGGTGCAGAGAAACC +
Preference number: 6 (lower is better)
Translates to: WSVGLLCSGEEE*GRGSTWGCRET
Trigger: GGTTTCTCTGCACCCCCAAGTGCTACCTCTGCCTCATTCTTCCTCCCCTGAGCACAACAGACCCACTGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp CCTGAGGATCTGGCAAGTGGTCAAACTCCAGCACCCTaGGAGCTGGAACAGTGGCATTCTGCTCAGAATGGG +
Preference number: 6 (lower is better)
Translates to: PEDLASGQTPAP*ELEQWHSAQNG
Trigger: CCCATTCTGAGCAGAATGCCACTGTTCCAGCTCCCAGGGTGCTGGAGTTTGACCACTTGCCAGATCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp GTTAGGCAGCCTTCTGGGTTGCACATCCCTGAGTCTTaGGCTAGTTCAGGCTGGGCTGTGCAGGAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: VRQPSGLHIPES*ASSGWAVQESS
Trigger: TGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCCAGAAGGCTGCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp TTGGCGAGAGAAGCTGAGCGCCTCATTTGGGATGGTTaGGTGAGCCCTGCCTGGAAAACCACTCGAGACTCG +
Preference number: 6 (lower is better)
Translates to: LAREAERLIWDG*VSPAWKTTRDS
Trigger: CGAGTCTCGAGTGGTTTTCCAGGCAGGGCTCACCAAACCATCCCAAATGAGGCGCTCAGCTTCTCTCGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000577991.1
ENST00000649863.1
CDS CAA 90 bp GGTGTGGATGAGCCATTTCCCCGTGGTAGAAAAAGGGCAGCACCTTaGACAGTTAGAAAGCTCTCGCTGATGCTCCTGGGCTGTGACCGG +
Preference number: 6 (lower is better)
Translates to: GVDEPFPRGRKRAAP*TVRKLSLMLLGCDR
Trigger: CCGGTCACAGCCCAGGAGCATCAGCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTTTCTACCACGGGGAAATGGCTCATCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000577483.1
ENST00000579040.5
ENST00000592397.1
CDS TCA 72 bp CGAGTGGACAATGAGGTACATGTTGGGGCAGCACCATaGTGCTCTTGCTCCTGCCGTAAGCGCTCTTCGAAC +
Preference number: 6 (lower is better)
Translates to: RVDNEVHVGAAP*CSCSCRKRSSN
Trigger: GTTCGAAGAGCGCTTACGGCAGGAGCAAGAGCATCATGGTGCTGCCCCAACATGTACCTCATTGTCCACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp TGTGGCCCTTTGGGGAACCCAGACCTAGGAGCTCAATaGGCCAGGGTTGTGACACCCTCTTTAGGGATCTGT +
Preference number: 6 (lower is better)
Translates to: CGPLGNPDLGAQ*ARVVTPSLGIC
Trigger: ACAGATCCCTAAAGAGGGTGTCACAACCCTGGCTCATTGAGCTCCTAGGTCTGGGTTCCCCAAAGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592397.1
CDS GCA 72 bp CGCTACTTAGCTGGGAGTCCTTATATGGCACCTCACTaGCACTGGAGAGAGGGCTCTCCTGACTTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: RYLAGSPYMAPH*HWREGSPDFLP
Trigger: GGGAAGAAAGTCAGGAGAGCCCTCTCTCCAGTGGCAGTGAGGTGCCATATAAGGACTCCCAGCTAAGTAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp CCACAAAGACAGGAGGTATGGGTGGGTGACTCTCCATaGTCTTCACCTCAGCAATCTGGTCTGCTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PQRQEVWVGDSP*SSPQQSGLLRW
Trigger: CCACCTCAGCAGACCAGATTGCTGAGGTGAAGACCATGGAGAGTCACCCACCCATACCTCCTGTCTTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp TTAGGCAGCCTTCTGGGTTGCACATCCCTGAGTCTTTaGCTAGTTCAGGCTGGGCTGTGCAGGAGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: LGSLLGCTSLSL*LVQAGLCRSPH
Trigger: ATGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCCAGAAGGCTGCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp ACCCTGGGAGCTGGAACAGTGGCATTCTGCTCAGAATaGGACAGTGAGCCAGCCTCAGACCCACTGTATTTC +
Preference number: 6 (lower is better)
Translates to: TLGAGTVAFCSE*DSEPASDPLYF
Trigger: GAAATACAGTGGGTCTGAGGCTGGCTCACTGTCCCATTCTGAGCAGAATGCCACTGTTCCAGCTCCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp TCACTTTCCTCAGCCCTTGCTCTCCGCTCTTCTCACTaGTGGCTATTTCACTCCCTGGCCCAGTGTGATTGG +
Preference number: 6 (lower is better)
Translates to: SLSSALALRSSH*WLFHSLAQCDW
Trigger: CCAATCACACTGGGCCAGGGAGTGAAATAGCCACCAGTGAGAAGAGCGGAGAGCAAGGGCTGAGGAAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp CTTCAGGGCTACTCAGGATGGAGGTTGGATGGTCAGTaGGTCTGTTGTGCTCAGGGGAGGAAGAATGAGGCA +
Preference number: 6 (lower is better)
Translates to: LQGYSGWRLDGQ*VCCAQGRKNEA
Trigger: TGCCTCATTCTTCCTCCCCTGAGCACAACAGACCCACTGACCATCCAACCTCCATCCTGAGTAGCCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp GTTGGAGATCGCCTGCATGCTTGTTCCGTCTGTGGCTaGTTCTTGGTGTGGATGAGCCATTTCCCCGTGGTA +
Preference number: 6 (lower is better)
Translates to: VGDRLHACSVCG*FLVWMSHFPVV
Trigger: TACCACGGGGAAATGGCTCATCCACACCAAGAATCAGCCACAGACGGAACAAGCATGCAGGCGATCTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269033.7
ENST00000324677.12
ENST00000394848.5
ENST00000540801.6
ENST00000577483.1
ENST00000579040.5
ENST00000592397.1
ENST00000649863.1
CDS TCA 72 bp CGAGAGAAGCTGAGCGCCTCATTTGGGATGGTTTGGTaGGCCCTGCCTGGAAAACCACTCGAGACTCGATTT +
Preference number: 6 (lower is better)
Translates to: REKLSASFGMVW*ALPGKPLETRF
Trigger: AAATCGAGTCTCGAGTGGTTTTCCAGGCAGGGCTCACCAAACCATCCCAAATGAGGCGCTCAGCTTCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000577991.1
ENST00000649863.1
CDS GCA 72 bp CTGGAGTCTGGGCCCTCTCAAGGAGCAGCTCATGGATaGTGTTCTTCTTTGGTGTATGGCATGGGTTGGGTA +
Preference number: 6 (lower is better)
Translates to: LESGPSQGAAHG*CSSLVYGMGWV
Trigger: TACCCAACCCATGCCATACACCAAAGAAGAACAGCATCCATGAGCTGCTCCTTGAGAGGGCCCAGACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS GCA 72 bp GCTAGTTCAGGCTGGGCTGTGCAGGAGTCCTCATCTTaGTCCATATGTCCAGGTTTGTTCTCTGGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: ASSGWAVQESSS*SICPGLFSGVW
Trigger: CCAGACTCCAGAGAACAAACCTGGACATATGGAGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAACTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp TCGTTCACGTTCAGTAGGTATGTCGGTGAAGAGAGCTaGAGAGTCGGGCCGGTGGGACTGTACATCTTGCAT +
Preference number: 6 (lower is better)
Translates to: SFTFSRYVGEES*RVGPVGLYILH
Trigger: ATGCAAGATGTACAGTCCCACCGGCCCGACTCTCCAGCTCTCTTCACCGACATACCTACTGAACGTGAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp GGGTTGCACATCCCTGAGTCTTTGGCTAGTTCAGGCTaGGCTGTGCAGGAGTCCTCATCTTGCTCCATATGT +
Preference number: 6 (lower is better)
Translates to: GLHIPESLASSG*AVQESSSCSIC
Trigger: ACATATGGAGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp GAGCGCCTCATTTGGGATGGTTTGGTGAGCCCTGCCTaGAAAACCACTCGAGACTCGATTTCTTTAGCACGC +
Preference number: 6 (lower is better)
Translates to: ERLIWDGLVSPA*KTTRDSISLAR
Trigger: GCGTGCTAAAGAAATCGAGTCTCGAGTGGTTTTCCAGGCAGGGCTCACCAAACCATCCCAAATGAGGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000577991.1
ENST00000649863.1
CDS CAA 72 bp GAGCCATTTCCCCGTGGTAGAAAAAGGGCAGCACCTTaGACAGTTAGAAAGCTCTCGCTGATGCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: EPFPRGRKRAAP*TVRKLSLMLLG
Trigger: GCCCAGGAGCATCAGCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTTTCTACCACGGGGAAATGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000577483.1
ENST00000579040.5
ENST00000592397.1
CDS CAA 90 bp TCCAAGTCTGCTATAGATGAGTGTGTGGTTAGGCAGCCTTCTGGGTaGCACATCCCTGAGTCTTTGGCTAGTTCAGGCTGGGCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: SKSAIDECVVRQPSG*HIPESLASSGWAVQ
Trigger: CTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCCAGAAGGCTGCCTAACCACACACTCATCTATAGCAGACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp CTGGGCTGTGACCGGCATTCTTCCTCCCCACTGTCTGCCTCCATGTaGCAGGCGACAATAGGGAAAGAAGACAATAAGGAGAGAAGAGCT +
Preference number: 6 (lower is better)
Translates to: LGCDRHSSSPLSASM*QATIGKEDNKERRA
Trigger: AGCTCTTCTCTCCTTATTGTCTTCTTTCCCTATTGTCGCCTGCAACATGGAGGCAGACAGTGGGGAGGAAGAATGCCGGTCACAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592397.1
CDS TCA 72 bp ATCAGCTGTCACTTTGGAAGGGGCTACTTCTACCACTaGCAGTCGACAGCTCTCATTCCTTCCTCCACCCAG +
Preference number: 6 (lower is better)
Translates to: ISCHFGRGYFYH*QSTALIPSSTQ
Trigger: CTGGGTGGAGGAAGGAATGAGAGCTGTCGACTGTCAGTGGTAGAAGTAGCCCCTTCCAAAGTGACAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS GCA 72 bp ACATCCCTGAGTCTTTGGCTAGTTCAGGCTGGGCTGTaGAGGAGTCCTCATCTTGCTCCATATGTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: TSLSLWLVQAGL*RSPHLAPYVQV
Trigger: AACCTGGACATATGGAGCAAGATGAGGACTCCTGCACAGCCCAGCCTGAACTAGCCAAAGACTCAGGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp GGTATGTCGGTGAAGAGAGCTGGAGAGTCGGGCCGGTaGGACTGTACATCTTGCATTGCATTCCATTCATTG +
Preference number: 6 (lower is better)
Translates to: GMSVKRAGESGR*DCTSCIAFHSL
Trigger: CAATGAATGGAATGCAATGCAAGATGTACAGTCCCACCGGCCCGACTCTCCAGCTCTCTTCACCGACATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp GTCCTCATCTTGCTCCATATGTCCAGGTTTGTTCTCTaGAGTCTGGGCCCTCTCAAGGAGCAGCTCATGGAT +
Preference number: 6 (lower is better)
Translates to: VLILLHMSRFVL*SLGPLKEQLMD
Trigger: ATCCATGAGCTGCTCCTTGAGAGGGCCCAGACTCCAGAGAACAAACCTGGACATATGGAGCAAGATGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp ATGAGCCAGGGTTGTGACACCCTCTTTAGGGATCTGTaGTTCCTGGCATCTCTAAGCTTCCAGGAGCCATCA +
Preference number: 6 (lower is better)
Translates to: MSQGCDTLFRDL*FLASLSFQEPS
Trigger: TGATGGCTCCTGGAAGCTTAGAGATGCCAGGAACCACAGATCCCTAAAGAGGGTGTCACAACCCTGGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592397.1
CDS CAA 72 bp CATAGGCTCGGTCCAGATTCCAGCCATATTCCTTCATaGCATAGGCAATCACGGTGGAGGCTGAGCGACTCA +
Preference number: 6 (lower is better)
Translates to: HRLGPDSSHIPS*HRQSRWRLSDS
Trigger: TGAGTCGCTCAGCCTCCACCGTGATTGCCTATGCAATGAAGGAATATGGCTGGAATCTGGACCGAGCCTATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp GCTATAGATGAGTGTGTGGTTAGGCAGCCTTCTGGGTaGCACATCCCTGAGTCTTTGGCTAGTTCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: AIDECVVRQPSG*HIPESLASSGW
Trigger: CCAGCCTGAACTAGCCAAAGACTCAGGGATGTGCAACCCAGAAGGCTGCCTAACCACACACTCATCTATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp GGTGTGGATGAGCCATTTCCCCGTGGTAGAAAAAGGGCAGCACCTTaGACAGTTAGAAAGCTCTCGCTGATGAGCTGGTTGATGGCGTTC +
Preference number: 6 (lower is better)
Translates to: GVDEPFPRGRKRAAP*TVRKLSLMSWLMAF
Trigger: GAACGCCATCAACCAGCTCATCAGCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTTTCTACCACGGGGAAATGGCTCATCCACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS CAA 90 bp ATGCCGCTGTTTGCTTGCCAGCAAGATCCCCTGATACTCTTCCAGTaGTCTCATGAAGCTTGGGTTGGGCTTGGTTACCGTTCGTCTTTC +
Preference number: 6 (lower is better)
Translates to: MPLFACQQDPLILFQ*SHEAWVGLGYRSSF
Trigger: GAAAGACGAACGGTAACCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGCAAACAGCGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp TTCACCTCAGCAATCTGGTCTGCTGAGGTGGTGATATCCTTCTTGTaGAGTTCTAGCCCAGGTTTGCAGATGGGTTCGTGGTGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: FTSAIWSAEVVISFL*SSSPGLQMGSWWSE
Trigger: CTCAGACCACCACGAACCCATCTGCAAACCTGGGCTAGAACTCAACAAGAAGGATATCACCACCTCAGCAGACCAGATTGCTGAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp GTCTTCACCTCAGCAATCTGGTCTGCTGAGGTGGTGATATCCTTCTaGTTGAGTTCTAGCCCAGGTTTGCAGATGGGTTCGTGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: VFTSAIWSAEVVISF*LSSSPGLQMGSWWS
Trigger: AGACCACCACGAACCCATCTGCAAACCTGGGCTAGAACTCAACAAGAAGGATATCACCACCTCAGCAGACCAGATTGCTGAGGTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp GTCACTGACTCACCTTGCCAGCAAGATCCCCTGATACTCTTCCAGTaGTCTCATGAAGCTTGGGTTGGGCTTGGTTACCGTTCGTCTTTC +
Preference number: 6 (lower is better)
Translates to: VTDSPCQQDPLILFQ*SHEAWVGLGYRSSF
Trigger: GAAAGACGAACGGTAACCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGGTGAGTCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394848.5
CDS CCA 72 bp GGGAAGAGGGACTGCTTGTGTTTCAGACTCCTGGTATaGAATCACAGTCCTCAGATCCTTCAGGACTCCTTC +
Preference number: 6 (lower is better)
Translates to: GKRDCLCFRLLV*NHSPQILQDSF
Trigger: GAAGGAGTCCTGAAGGATCTGAGGACTGTGATTCCATACCAGGAGTCTGAAACACAAGCAGTCCCTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp GGAAGGGGAAGAGGGACTGCTTGTGTTTCAGACTCCTaGTATGGAATCACAGTCCTCAGATCCTTCAGGACT +
Preference number: 6 (lower is better)
Translates to: GRGRGTACVSDS*YGITVLRSFRT
Trigger: AGTCCTGAAGGATCTGAGGACTGTGATTCCATACCAGGAGTCTGAAACACAAGCAGTCCCTCTTCCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp GCAATCTGGTCTGCTGAGGTGGTGATATCCTTCTTGTaGAGTTCTAGCCCAGGTTTGCAGATGGGTTCGTGG +
Preference number: 6 (lower is better)
Translates to: AIWSAEVVISFL*SSSPGLQMGSW
Trigger: CCACGAACCCATCTGCAAACCTGGGCTAGAACTCAACAAGAAGGATATCACCACCTCAGCAGACCAGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp GAGCCATTTCCCCGTGGTAGAAAAAGGGCAGCACCTTaGACAGTTAGAAAGCTCTCGCTGATGAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: EPFPRGRKRAAP*TVRKLSLMSWL
Trigger: CAACCAGCTCATCAGCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTTTCTACCACGGGGAAATGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324677.12
ENST00000649863.1
CDS CAA 72 bp TCACCTTGCCAGCAAGATCCCCTGATACTCTTCCAGTaGTCTCATGAAGCTTGGGTTGGGCTTGGTTACCGT +
Preference number: 6 (lower is better)
Translates to: SPCQQDPLILFQ*SHEAWVGLGYR
Trigger: ACGGTAACCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394848.5
CDS CAA 90 bp GAGTCTGGGCCCTCTCAAGGAGCAGCTCATGGATGCTGTTCTTCTTaGGTGTATGGCATGGGTTGGGTAAGATGTCTCCTTTCAGTTGAA +
Preference number: 6 (lower is better)
Translates to: ESGPSQGAAHGCCSS*VYGMGWVRCLLSVE
Trigger: TTCAACTGAAAGGAGACATCTTACCCAACCCATGCCATACACCAAAGAAGAACAGCATCCATGAGCTGCTCCTTGAGAGGGCCCAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp CCAGCAAGATCCCCTGATACTCTTCCAGTTGTCTCATaGAGCTTGGGTTGGGCTTGGTTACCGTTCGTCTTT +
Preference number: 6 (lower is better)
Translates to: PARSPDTLPVVS*SLGWAWLPFVF
Trigger: AAAGACGAACGGTAACCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS GCA 72 bp TCTTCTGGGCGGAGTAAAATGAACATTGCTTGGAGATaGTGTTGGAGATCGCCTGCATGCTTGTTCCGTCTG +
Preference number: 6 (lower is better)
Translates to: SSGRSKMNIAWR*CWRSPACLFRL
Trigger: CAGACGGAACAAGCATGCAGGCGATCTCCAACAGCATCTCCAAGCAATGTTCATTTTACTCCGCCCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269033.7
ENST00000324677.12
ENST00000394848.5
ENST00000540801.6
ENST00000577483.1
ENST00000579040.5
ENST00000592397.1
ENST00000649863.1
CDS CCA 72 bp TATACCGTACCCCTCGGTTCTGTAAGTCCTCTAAGTTaGAGGCATTCCATTCTGAGCCCAGGAACACATGCT +
Preference number: 6 (lower is better)
Translates to: YTVPLGSVSPLS*RHSILSPGTHA
Trigger: AGCATGTGTTCCTGGGCTCAGAATGGAATGCCTCCAACTTAGAGGACTTACAGAACCGAGGGGTACGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp TCCTTACATATTACACCTGGGTTTTCTAGGGACTCTTaGTCCTCCATCGCGTGCATGCCTGAGTCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: SLHITPGFSRDS*SSIACMPESVL
Trigger: CAGAACAGACTCAGGCATGCACGCGATGGAGGACCAAGAGTCCCTAGAAAACCCAGGTGTAATATGTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577991.1
CDS CAA 72 bp ATATACCGTACCCCTCGGTTCTGTAAGTCCTCTAAGTaGGAGGCATTCCATTCTGAGCCCAGGAACACATGC +
Preference number: 6 (lower is better)
Translates to: IYRTPRFCKSSK*EAFHSEPRNTC
Trigger: GCATGTGTTCCTGGGCTCAGAATGGAATGCCTCCAACTTAGAGGACTTACAGAACCGAGGGGTACGGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp TTTGCTTGCCAGCAAGATCCCCTGATACTCTTCCAGTaGTCTCATGAAGCTTGGGTTGGGCTTGGTTACCGT +
Preference number: 6 (lower is better)
Translates to: FACQQDPLILFQ*SHEAWVGLGYR
Trigger: ACGGTAACCAAGCCCAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp TCAGCAATCTGGTCTGCTGAGGTGGTGATATCCTTCTaGTTGAGTTCTAGCCCAGGTTTGCAGATGGGTTCG +
Preference number: 6 (lower is better)
Translates to: SAIWSAEVVISF*LSSSPGLQMGS
Trigger: CGAACCCATCTGCAAACCTGGGCTAGAACTCAACAAGAAGGATATCACCACCTCAGCAGACCAGATTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp CCCTCTCAAGGAGCAGCTCATGGATGCTGTTCTTCTTaGGTGTATGGCATGGGTTGGGTAAGATGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: PSQGAAHGCCSS*VYGMGWVRCLL
Trigger: AAGGAGACATCTTACCCAACCCATGCCATACACCAAAGAAGAACAGCATCCATGAGCTGCTCCTTGAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp TCTTTGGCATACTGCACAAGGGGCCTCTCCACTGGCTaGCTCTGCACAATACACTCTGTTGTTGTGAGTTGT +
Preference number: 6 (lower is better)
Translates to: SLAYCTRGLSTG*LCTIHSVVVSC
Trigger: ACAACTCACAACAACAGAGTGTATTGTGCAGAGCAAGCCAGTGGAGAGGCCCCTTGTGCAGTATGCCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp TTGTTATGCCGCTGTTTGCTTGCCAGCAAGATCCCCTaGTACTCTTCCAGTTGTCTCATGAAGCTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: LLCRCLLASKIP*YSSSCLMKLGL
Trigger: CAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGCAAACAGCGGCATAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp AGAAAGTCACTGACTCACCTTGCCAGCAAGATCCCCTaGTACTCTTCCAGTTGTCTCATGAAGCTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: RKSLTHLASKIP*YSSSCLMKLGL
Trigger: CAACCCAAGCTTCATGAGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGGTGAGTCAGTGACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394848.5
CDS TCA 72 bp AAATTCTTCCTTACAATCACTGGAAATCTGCCTCCCTaGACCAAGAATCCCAGTTCTGCTCTCGAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: KFFLTITGNLPP*TKNPSSALEAQ
Trigger: CTGCGCCTCGAGAGCAGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS GCA 72 bp AAGGAGGGAGAATTGGAGAAAGTCACTGACTCACCTTaGCAGCAAGATCCCCTGATACTCTTCCAGTTGTCT +
Preference number: 6 (lower is better)
Translates to: KEGELEKVTDSP*QQDPLILFQLS
Trigger: AGACAACTGGAAGAGTATCAGGGGATCTTGCTGGCAAGGTGAGTCAGTGACTTTCTCCAATTCTCCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394848.5
CDS CCA 72 bp GATGCATGGGGAGTATTACTCAAAGAGCTGCTTCTCTaGTCATCAGCTGTCACTTTGGAAGGGGCTACTTCT +
Preference number: 6 (lower is better)
Translates to: DAWGVLLKELLL*SSAVTLEGATS
Trigger: AGAAGTAGCCCCTTCCAAAGTGACAGCTGATGACCAGAGAAGCAGCTCTTTGAGTAATACTCCCCATGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp TCTTTGAATTCTTACGAGTGGACAATGAGGTACATGTaGGGGCAGCACCATGATGCTCTTGCTCCTGCCGTA +
Preference number: 6 (lower is better)
Translates to: SLNSYEWTMRYM*GQHHDALAPAV
Trigger: TACGGCAGGAGCAAGAGCATCATGGTGCTGCCCCAACATGTACCTCATTGTCCACTCGTAAGAATTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp GACAGTGAGCCAGCCTCAGACCCACTGTATTTCCCTTaGCCTTTGCTCATTTCTGGTTCCTTGAGGACAAAT +
Preference number: 6 (lower is better)
Translates to: DSEPASDPLYFP*PLLISGSLRTN
Trigger: ATTTGTCCTCAAGGAACCAGAAATGAGCAAAGGCAAAGGGAAATACAGTGGGTCTGAGGCTGGCTCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp GCAGATCATTCTTTCTTTGGTACACAGGCCTTTCTGATTTGCATCTaGTGGGACCATATGTTCCACAAAGACAGGAGGTATGGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: ADHSFFGTQAFLICI*WDHMFHKDRRYGWV
Trigger: CACCCACCCATACCTCCTGTCTTTGTGGAACATATGGTCCCACAAGATGCAAATCAGAAAGGCCTGTGTACCAAAGAAAGAATGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp AAGAATCATTCTTTGAATTCTTACGAGTGGACAATGAGGTACATGTaGGGGCAGCACCATGATGCTCTTGCTCCTGCCGTAAGCGCTCTT +
Preference number: 6 (lower is better)
Translates to: KNHSLNSYEWTMRYM*GQHHDALAPAVSAL
Trigger: AAGAGCGCTTACGGCAGGAGCAAGAGCATCATGGTGCTGCCCCAACATGTACCTCATTGTCCACTCGTAAGAATTCAAAGAATGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp TCAGAATGGGACAGTGAGCCAGCCTCAGACCCACTGTATTTCCCTTaGCCTTTGCTCATTTCTGGTTCCTTGAGGACAAATGAATGTTCT +
Preference number: 6 (lower is better)
Translates to: SEWDSEPASDPLYFP*PLLISGSLRTNECS
Trigger: AGAACATTCATTTGTCCTCAAGGAACCAGAAATGAGCAAAGGCAAAGGGAAATACAGTGGGTCTGAGGCTGGCTCACTGTCCCATTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp CAGGCTACAGGCAATGGGTCCATTTTCTCCTGTAACTCCCCAGTGTaGTCACCAAGTTTGCTAATTAAACTTAGGTCTGCGCTACTTAGC +
Preference number: 6 (lower is better)
Translates to: QATGNGSIFSCNSPV*SPSLLIKLRSALLS
Trigger: GCTAAGTAGCGCAGACCTAAGTTTAATTAGCAAACTTGGTGACAACACTGGGGAGTTACAGGAGAAAATGGACCCATTGCCTGTAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp GTCAATTCAAGTCCTGCCCTGGGGAGCAAATACTGCTaGCTAGAACCAAATTCTTTGGCATACTGCACAAGG +
Preference number: 6 (lower is better)
Translates to: VNSSPALGSKYC*LEPNSLAYCTR
Trigger: CCTTGTGCAGTATGCCAAAGAATTTGGTTCTAGTCAGCAGTATTTGCTCCCCAGGGCAGGACTTGAATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS GCA 72 bp ATTCTTCTGATGCATGGGGAGTATTACTCAAAGAGCTaGTTCTCTGGTCATCAGCTGTCACTTTGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: ILLMHGEYYSKS*FSGHQLSLWKG
Trigger: CCCCTTCCAAAGTGACAGCTGATGACCAGAGAAGCAGCTCTTTGAGTAATACTCCCCATGCATCAGAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS GCA 72 bp AATGATTTCTACCCTCTTGGGAAGGGGAAGAGGGACTaGTTGTGTTTCAGACTCCTGGTATGGAATCACAGT +
Preference number: 6 (lower is better)
Translates to: NDFYPLGKGKRD*LCFRLLVWNHS
Trigger: ACTGTGATTCCATACCAGGAGTCTGAAACACAAGCAGTCCCTCTTCCCCTTCCCAAGAGGGTAGAAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp AGTTTGCTAATTAAACTTAGGTCTGCGCTACTTAGCTaGGAGTCCTTATATGGCACCTCACTGCCACTGGAG +
Preference number: 6 (lower is better)
Translates to: SLLIKLRSALLS*ESLYGTSLPLE
Trigger: CTCCAGTGGCAGTGAGGTGCCATATAAGGACTCCCAGCTAAGTAGCGCAGACCTAAGTTTAATTAGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp GTAAGCAGTCTTTACAGAGGTCCAAGTAACCTAATTTaGCGAGAGAAGCTGAGCGCCTCATTTGGGATGGTT +
Preference number: 6 (lower is better)
Translates to: VSSLYRGPSNLI*REKLSASFGMV
Trigger: AACCATCCCAAATGAGGCGCTCAGCTTCTCTCGCCAAATTAGGTTACTTGGACCTCTGTAAAGACTGCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000577991.1
ENST00000649863.1
CDS CAA 72 bp TGGCTTGCTCTGCACAATACACTCTGTTGTTGTGAGTaGTTCTACAAAAGACTTGGTGGGCTCTGGGTTGTG +
Preference number: 6 (lower is better)
Translates to: WLALHNTLCCCE*FYKRLGGLWVV
Trigger: CACAACCCAGAGCCCACCAAGTCTTTTGTAGAACAACTCACAACAACAGAGTGTATTGTGCAGAGCAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp ACATTCAAGATATACCGTACCCCTCGGTTCTGTAAGTCCTCTAAGTaGGAGGCATTCCATTCTGAGCCCAGGAACACATGCTCAAATATC +
Preference number: 6 (lower is better)
Translates to: TFKIYRTPRFCKSSK*EAFHSEPRNTCSNI
Trigger: GATATTTGAGCATGTGTTCCTGGGCTCAGAATGGAATGCCTCCAACTTAGAGGACTTACAGAACCGAGGGGTACGGTATATCTTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp GAACCAAATTCTTTGGCATACTGCACAAGGGGCCTCTCCACTGGCTaGCTCTGCACAATACACTCTGTTGTTGTGAGTTGTTCTACAAAA +
Preference number: 6 (lower is better)
Translates to: EPNSLAYCTRGLSTG*LCTIHSVVVSCSTK
Trigger: TTTTGTAGAACAACTCACAACAACAGAGTGTATTGTGCAGAGCAAGCCAGTGGAGAGGCCCCTTGTGCAGTATGCCAAAGAATTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp ATGGGTTCGTGGTGGTCTGAGAGGTCACTATCTGAATaGGATCTCCATAGTTTGTTATGCCGCTGTTTGCTT +
Preference number: 6 (lower is better)
Translates to: MGSWWSERSLSE*DLHSLLCRCLL
Trigger: AAGCAAACAGCGGCATAACAAACTATGGAGATCTCATTCAGATAGTGACCTCTCAGACCACCACGAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp GGAAACTTGTTGGCCATTTCTGGGACATGTCCAGGCTaGATTAAGGCTTTGGATGCATGGCAATTGTCAAGA +
Preference number: 6 (lower is better)
Translates to: GNLLAISGTCPG*IKALDAWQLSR
Trigger: TCTTGACAATTGCCATGCATCCAAAGCCTTAATTCAGCCTGGACATGTCCCAGAAATGGCCAACAAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp TTCTCACTGGTGGCTATTTCACTCCCTGGCCCAGTGTaGTTGGGTGATGTAACTATGTGGGTATATTCAATG +
Preference number: 6 (lower is better)
Translates to: FSLVAISLPGPV*LGDVTMWVYSM
Trigger: CATTGAATATACCCACATAGTTACATCACCCAATCACACTGGGCCAGGGAGTGAAATAGCCACCAGTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp TTCTTTGGTACACAGGCCTTTCTGATTTGCATCTTGTaGGACCATATGTTCCACAAAGACAGGAGGTATGGG +
Preference number: 6 (lower is better)
Translates to: FFGTQAFLICIL*DHMFHKDRRYG
Trigger: CCCATACCTCCTGTCTTTGTGGAACATATGGTCCCACAAGATGCAAATCAGAAAGGCCTGTGTACCAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp TTCAGTGGAGATGTCAATTCTTCCATAGGCAGTAGGTaGACATTCATGTCTGCTTTCAGTGCATCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: FSGDVNSSIGSR*TFMSAFSASVS
Trigger: GGAGACAGATGCACTGAAAGCAGACATGAATGTCCACCTACTGCCTATGGAAGAATTGACATCTCCACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp ATCCTTGAATGGGAAAAAGATCGTGACCGGGTTTCTTaGGAGAGCTCCACAAACTTCTCTAGGGCACTAAAA +
Preference number: 6 (lower is better)
Translates to: ILEWEKDRDRVS*ESSTNFSRALK
Trigger: TTTTAGTGCCCTAGAGAAGTTTGTGGAGCTCTCCCAAGAAACCCGGTCACGATCTTTTTCCCATTCAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp GGCAATGGGTCCATTTTCTCCTGTAACTCCCCAGTGTaGTCACCAAGTTTGCTAATTAAACTTAGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: GNGSIFSCNSPV*SPSLLIKLRSA
Trigger: CGCAGACCTAAGTTTAATTAGCAAACTTGGTGACAACACTGGGGAGTTACAGGAGAAAATGGACCCATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp ACTCCAAGCAGATCATTCTTTCTTTGGTACACAGGCCTTTCTGATTaGCATCTTGTGGGACCATATGTTCCACAAAGACAGGAGGTATGG +
Preference number: 6 (lower is better)
Translates to: TPSRSFFLWYTGLSD*HLVGPYVPQRQEVW
Trigger: CCATACCTCCTGTCTTTGTGGAACATATGGTCCCACAAGATGCAAATCAGAAAGGCCTGTGTACCAAAGAAAGAATGATCTGCTTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp TTGGGTGATGTAACTATGTGGGTATATTCAATGATTTCTACCCTCTaGGGAAGGGGAAGAGGGACTGCTTGTGTTTCAGACTCCTGGTAT +
Preference number: 6 (lower is better)
Translates to: LGDVTMWVYSMISTL*GRGRGTACVSDSWY
Trigger: ATACCAGGAGTCTGAAACACAAGCAGTCCCTCTTCCCCTTCCCAAGAGGGTAGAAATCATTGAATATACCCACATAGTTACATCACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp AATGGGTCCATTTTCTCCTGTAACTCCCCAGTGTTGTCACCAAGTTaGCTAATTAAACTTAGGTCTGCGCTACTTAGCTGGGAGTCCTTA +
Preference number: 6 (lower is better)
Translates to: NGSIFSCNSPVLSPS*LIKLRSALLSWESL
Trigger: TAAGGACTCCCAGCTAAGTAGCGCAGACCTAAGTTTAATTAGCAAACTTGGTGACAACACTGGGGAGTTACAGGAGAAAATGGACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp GGTGGCTATTTCACTCCCTGGCCCAGTGTGATTGGGTaGTGTAACTATGTGGGTATATTCAATGATTTCTAC +
Preference number: 6 (lower is better)
Translates to: GGYFTPWPSVIG*CNYVGIFNDFY
Trigger: GTAGAAATCATTGAATATACCCACATAGTTACATCACCCAATCACACTGGGCCAGGGAGTGAAATAGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp CTGCCAGAGCCTAAGAATAACACCTCTGAATTCCTCTaGATTTCACTTGTTCACCAATACTCAAGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LPEPKNNTSEFL*ISLVHQYSRPS
Trigger: GGAAGGCCTTGAGTATTGGTGAACAAGTGAAATTCAGAGGAATTCAGAGGTGTTATTCTTAGGCTCTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577483.1
CDS GCA 72 bp ACTGTTACAAATTCTTCCTTACAATCACTGGAAATCTaGCTCCCTGAACCAAGAATCCCAGTTCTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: TVTNSSLQSLEI*LPEPRIPVLLS
Trigger: CGAGAGCAGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAGAATTTGTAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS CCA 72 bp TCTCCAAATCTTCCACTGTTAAGTCTGGAAACTTGTTaGCCATTTCTGGGACATGTCCAGGCTGAATTAAGG +
Preference number: 6 (lower is better)
Translates to: SPNLPLLSLETC*PFLGHVQAELR
Trigger: CCTTAATTCAGCCTGGACATGTCCCAGAAATGGCCAACAAGTTTCCAGACTTAACAGTGGAAGATTTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp GACTGTTCCTCATCCATTGAAGATTCTTCTGATGCATaGGGAGTATTACTCAAAGAGCTGCTTCTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: DCSSSIEDSSDA*GVLLKELLLWS
Trigger: TGACCAGAGAAGCAGCTCTTTGAGTAATACTCCCCATGCATCAGAAGAATCTTCAATGGATGAGGAACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CCA 72 bp TGCACTCCACTGTTACAAATTCTTCCTTACAATCACTaGAAATCTGCCTCCCTGAACCAAGAATCCCAGTTC +
Preference number: 6 (lower is better)
Translates to: CTPLLQILPYNH*KSASLNQESQF
Trigger: GAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAGAATTTGTAACAGTGGAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS CAA 72 bp GTAACTATGTGGGTATATTCAATGATTTCTACCCTCTaGGGAAGGGGAAGAGGGACTGCTTGTGTTTCAGAC +
Preference number: 6 (lower is better)
Translates to: VTMWVYSMISTL*GRGRGTACVSD
Trigger: GTCTGAAACACAAGCAGTCCCTCTTCCCCTTCCCAAGAGGGTAGAAATCATTGAATATACCCACATAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS GCA 72 bp TCGGTATCAACTGGCTTATCTAAACCGTTAAGTCTCTaGCAGAGCCTAAGAATAACACCTCTGAATTCCTCT +
Preference number: 6 (lower is better)
Translates to: SVSTGLSKPLSL*QSLRITPLNSS
Trigger: AGAGGAATTCAGAGGTGTTATTCTTAGGCTCTGGCAGAGACTTAACGGTTTAGATAAGCCAGTTGATACCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577483.1
CDS CAA 72 bp TCTTTCTTTGGTACACAGGCCTTTCTGATTTGCATCTaGTGGGACCATATGTTCCACAAAGACAGGAGGTAT +
Preference number: 6 (lower is better)
Translates to: SFFGTQAFLICI*WDHMFHKDRRY
Trigger: ATACCTCCTGTCTTTGTGGAACATATGGTCCCACAAGATGCAAATCAGAAAGGCCTGTGTACCAAAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp ATTTTCTCCTGTAACTCCCCAGTGTTGTCACCAAGTTaGCTAATTAAACTTAGGTCTGCGCTACTTAGCTGG +
Preference number: 6 (lower is better)
Translates to: IFSCNSPVLSPS*LIKLRSALLSW
Trigger: CCAGCTAAGTAGCGCAGACCTAAGTTTAATTAGCAAACTTGGTGACAACACTGGGGAGTTACAGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp GACGATGCTTTCTTCAGTGTCTTGTCTACCATTAGTTaGAACCACTACCATATAGCGTGTTCGATTCTGGTA +
Preference number: 6 (lower is better)
Translates to: DDAFFSVLSTIS*NHYHIACSILV
Trigger: TACCAGAATCGAACACGCTATATGGTAGTGGTTTCAACTAATGGTAGACAAGACACTGAAGAAAGCATCGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269033.7
ENST00000324677.12
ENST00000394848.5
ENST00000540801.6
ENST00000577483.1
ENST00000579040.5
ENST00000592397.1
ENST00000649863.1
CDS GCA 72 bp TTTCCAGCAATGTGCACTCACTATTTTGCAAGGCAGTaGACTCCACTGTTACAAATTCTTCCTTACAATCAC +
Preference number: 6 (lower is better)
Translates to: FPAMCTHYFARQ*TPLLQILPYNH
Trigger: GTGATTGTAAGGAAGAATTTGTAACAGTGGAGTGCACTGCCTTGCAAAATAGTGAGTGCACATTGCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS GCA 72 bp TGCTTGAATATTTCCAGCAATGTGCACTCACTATTTTaGAAGGCAGTGCACTCCACTGTTACAAATTCTTCC +
Preference number: 6 (lower is better)
Translates to: CLNISSNVHSLF*KAVHSTVTNSS
Trigger: GGAAGAATTTGTAACAGTGGAGTGCACTGCCTTGCAAAATAGTGAGTGCACATTGCTGGAAATATTCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS CCA 72 bp CCATTTCTGGGACATGTCCAGGCTGAATTAAGGCTTTaGATGCATGGCAATTGTCAAGAGGAAATTTTGATT +
Preference number: 6 (lower is better)
Translates to: PFLGHVQAELRL*MHGNCQEEILI
Trigger: AATCAAAATTTCCTCTTGACAATTGCCATGCATCCAAAGCCTTAATTCAGCCTGGACATGTCCCAGAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp CTTTTGGTGCTAGGTCTGCCACAGAAGAATCATTCTTaGAATTCTTACGAGTGGACAATGAGGTACATGTTG +
Preference number: 6 (lower is better)
Translates to: LLVLGLPQKNHS*NSYEWTMRYML
Trigger: CAACATGTACCTCATTGTCCACTCGTAAGAATTCAAAGAATGATTCTTCTGTGGCAGACCTAGCACCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp AGATCCGTTGCCTCTTCATCATATACCCGAATGTTATaGTACTCAAAGACTCCTGGGAAGAAGTTATCTATC +
Preference number: 6 (lower is better)
Translates to: RSVASSSYTRML*YSKTPGKKLSI
Trigger: GATAGATAACTTCTTCCCAGGAGTCTTTGAGTATCATAACATTCGGGTATATGATGAAGAGGCAACGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp TTGCTTGAATATTTCCAGCAATGTGCACTCACTATTTaGCAAGGCAGTGCACTCCACTGTTACAAATTCTTC +
Preference number: 6 (lower is better)
Translates to: LLEYFQQCALTI*QGSALHCYKFF
Trigger: GAAGAATTTGTAACAGTGGAGTGCACTGCCTTGCAAAATAGTGAGTGCACATTGCTGGAAATATTCAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579954.1
CDS GCA 72 bp ATCTGGCATGTAGTAAATAGCCCTGAAATGTCCATATaGCAGCTGATGGTTATTAGCAAGTATAATGTTTTC +
Preference number: 6 (lower is better)
Translates to: IWHVVNSPEMSI*QLMVISKYNVF
Trigger: GAAAACATTATACTTGCTAATAACCATCAGCTGGCATATGGACATTTCAGGGCTATTTACTACATGCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577483.1
CDS CAA 90 bp GATGTAATATTCTCCAAATCCTTCTGCATCATGATCTCCCTTAATTaGGTTTTAATTAGCCTTTCTGTTCGTTCACGTTCAGTAGGTATG +
Preference number: 6 (lower is better)
Translates to: DVIFSKSFCIMISLN*VLISLSVRSRSVGM
Trigger: CATACCTACTGAACGTGAACGAACAGAAAGGCTAATTAAAACCAAATTAAGGGAGATCATGATGCAGAAGGATTTGGAGAATATTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269033.7
ENST00000394848.5
ENST00000540801.6
ENST00000649863.1
CDS CAA 90 bp ATTCCTCTGAATTTCACTTGTTCACCAATACTCAAGGCCTTCCAATaGCAACAATTTGAATATTGCATTTCTAGGTCATCTTTAACTACG +
Preference number: 6 (lower is better)
Translates to: IPLNFTCSPILKAFQ*QQFEYCISRSSLTT
Trigger: CGTAGTTAAAGATGACCTAGAAATGCAATATTCAAATTGTTGCAATTGGAAGGCCTTGAGTATTGGTGAACAAGTGAAATTCAGAGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577483.1
CDS TCA 72 bp TTGATTCATTCAGACAACACCCTGATGAGCATCCATTaGTGTCATTTAAGTTTAATTCATCCTCAATCTGTC +
Preference number: 6 (lower is better)
Translates to: LIHSDNTLMSIH*CHLSLIHPQSV
Trigger: GACAGATTGAGGATGAATTAAACTTAAATGACATCAATGGATGCTCATCAGGGTGTTGTCTGAATGAATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS TCA 72 bp TCATTTAAGTTTAATTCATCCTCAATCTGTCCAGCATaGAATTCCCTAGAAGTAAACTCCAAGCAGATCATT +
Preference number: 6 (lower is better)
Translates to: SFKFNSSSICPA*NSLEVNSKQII
Trigger: AATGATCTGCTTGGAGTTTACTTCTAGGGAATTTCATGCTGGACAGATTGAGGATGAATTAAACTTAAATGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1
CDS CAA 72 bp TTTGATTCATTCAGACAACACCCTGATGAGCATCCATaGATGTCATTTAAGTTTAATTCATCCTCAATCTGT +
Preference number: 6 (lower is better)
Translates to: FDSFRQHPDEHP*MSFKFNSSSIC
Trigger: ACAGATTGAGGATGAATTAAACTTAAATGACATCAATGGATGCTCATCAGGGTGTTGTCTGAATGAATCAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269033.7
ENST00000540801.6
ENST00000649863.1