RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SSH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000084112

Ensembl transcript IDs: ENST00000326470.9, ENST00000326495.10, ENST00000546433.5, ENST00000546697.1, ENST00000546812.1, ENST00000547381.1, ENST00000547862.6, ENST00000548522.5, ENST00000551165.5

Found 1227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCAGCTCGTGGAGCGCGGCTGGATCCTGGCTCTCCTCGGGGATaGTGGCCTCCAGCCTGCTGGCAGGGCCATCCCTGGAGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: GPARGARLDPGSPRG*WPPACWQGHPWREV
Trigger: CACCTCCCTCCAGGGATGGCCCTGCCAGCAGGCTGGAGGCCAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGCTCCACGAGCTGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp GGCCTGGCTGGGCATAACCAGGGGGCCCAGCTCGTGGAGCGCGGCTaGATCCTGGCTCTCCTCGGGGATGCTGGCCTCCAGCCTGCTGGC +
Preference number: 1 (lower is better)
Translates to: GLAGHNQGAQLVERG*ILALLGDAGLQPAG
Trigger: GCCAGCAGGCTGGAGGCCAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGCTCCACGAGCTGGGCCCCCTGGTTATGCCCAGCCAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp GCGCGGCTGGATCCTGGCTCTCCTCGGGGATGCTGGCCTCCAGCCTaGTGGCAGGGCCATCCCTGGAGGGAGGTGCTGGGTCTGCAGGCA +
Preference number: 1 (lower is better)
Translates to: ARLDPGSPRGCWPPA*WQGHPWREVLGLQA
Trigger: TGCCTGCAGACCCAGCACCTCCCTCCAGGGATGGCCCTGCCAGCAGGCTGGAGGCCAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp CGGCTGGATCCTGGCTCTCCTCGGGGATGCTGGCCTCCAGCCTGCTaGCAGGGCCATCCCTGGAGGGAGGTGCTGGGTCTGCAGGCACGC +
Preference number: 1 (lower is better)
Translates to: RLDPGSPRGCWPPAC*QGHPWREVLGLQAR
Trigger: GCGTGCCTGCAGACCCAGCACCTCCCTCCAGGGATGGCCCTGCCAGCAGGCTGGAGGCCAGCATCCCCGAGGAGAGCCAGGATCCAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp TCATCACTCCCGGCCTGGCTGGGCATAACCAGGGGGCCCAGCTCGTaGAGCGCGGCTGGATCCTGGCTCTCCTCGGGGATGCTGGCCTCC +
Preference number: 1 (lower is better)
Translates to: SSLPAWLGITRGPSS*SAAGSWLSSGMLAS
Trigger: GGAGGCCAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGCTCCACGAGCTGGGCCCCCTGGTTATGCCCAGCCAGGCCGGGAGTGATGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp GGGCCAGAGGCTGGCTTCTCCGGAACACGGGACCTGCTGGCCAAGTaGGCCACAGGGGAGGACGTGATGTGGGGTAGGAAGGCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: GPEAGFSGTRDLLAK*ATGEDVMWGRKAGW
Trigger: CCAGCCAGCCTTCCTACCCCACATCACGTCCTCCCCTGTGGCCCACTTGGCCAGCAGGTCCCGTGTTCCGGAGAAGCCAGCCTCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp TCCAATGAAGCGGGGGCGGCCTCTGACTTCTCATCACTCCCGGCCTaGCTGGGCATAACCAGGGGGCCCAGCTCGTGGAGCGCGGCTGGA +
Preference number: 1 (lower is better)
Translates to: SNEAGAASDFSSLPA*LGITRGPSSWSAAG
Trigger: TCCAGCCGCGCTCCACGAGCTGGGCCCCCTGGTTATGCCCAGCCAGGCCGGGAGTGATGAGAAGTCAGAGGCCGCCCCCGCTTCATTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp ACACGGGACCTGCTGGCCAAGTGGGCCACAGGGGAGGACGTGATGTaGGGTAGGAAGGCTGGCTGGGTGCAGATGGCGGGAGCATTGGGG +
Preference number: 1 (lower is better)
Translates to: TRDLLAKWATGEDVM*GRKAGWVQMAGALG
Trigger: CCCCAATGCTCCCGCCATCTGCACCCAGCCAGCCTTCCTACCCCACATCACGTCCTCCCCTGTGGCCCACTTGGCCAGCAGGTCCCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp TGTGTGACTGGGGAATGGGCAGGTGCTGGACTCTGGTGCAGAGGCTaGCTGGCCTGCGCCACCCCACGGCTGGCTAGCAGACCAAGCTAC +
Preference number: 1 (lower is better)
Translates to: CVTGEWAGAGLWCRG*LACATPRLASRPSY
Trigger: GTAGCTTGGTCTGCTAGCCAGCCGTGGGGTGGCGCAGGCCAGGCAGCCTCTGCACCAGAGTCCAGCACCTGCCCATTCCCCAGTCACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp CGGGCTGGGCGGCATCATCCAAGAAGGGCAGCTGGCTTTCCGGGGTaGCATCTGGGGTCTCTGGCAAGAAGTCGCCAGGTCCTGCAGGGT +
Preference number: 1 (lower is better)
Translates to: RAGRHHPRRAAGFPG*HLGSLARSRQVLQG
Trigger: ACCCTGCAGGACCTGGCGACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGATGATGCCGCCCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp GAGTCCGGAACCTTGCTGGGGCTGTCTGGCCGGCCTGTGCACCTCTaGAGGTGGAGCAGCTTCCTCCAACAGAGCCTCCCTCTCCGGATC +
Preference number: 1 (lower is better)
Translates to: ESGTLLGLSGRPVHL*RWSSFLQQSLPLRI
Trigger: GATCCGGAGAGGGAGGCTCTGTTGGAGGAAGCTGCTCCACCTGCAGAGGTGCACAGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp AGTCCACTCCCAGCAAGATATTCTCCTCGGTGTCCTGGCGCCCGCTaGTGTACACCACCACCATGTACCGGACCCGGTCCGCCCAGGCGC +
Preference number: 1 (lower is better)
Translates to: SPLPARYSPRCPGAR*CTPPPCTGPGPPRR
Trigger: GCGCCTGGGCGGACCGGGTCCGGTACATGGTGGTGGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAATATCTTGCTGGGAGTGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR TCA 90 bp CCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGACGGTaGGGCCCGCCAGCCGGAGCCGGGTCTCAATCTCCTGTGTCCGCT +
Preference number: 1 (lower is better)
Translates to: PAWQESVSASVGKRR*GPPAGAGSQSPVSA
Trigger: AGCGGACACAGGAGATTGAGACCCGGCTCCGGCTGGCGGGCCTCACCGTCTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp GGGGAATGGGCAGGTGCTGGACTCTGGTGCAGAGGCTGCCTGGCCTaGGCCACCCCACGGCTGGCTAGCAGACCAAGCTACGTTCTTTCA +
Preference number: 1 (lower is better)
Translates to: GEWAGAGLWCRGCLA*ATPRLASRPSYVLS
Trigger: TGAAAGAACGTAGCTTGGTCTGCTAGCCAGCCGTGGGGTGGCGCAGGCCAGGCAGCCTCTGCACCAGAGTCCAGCACCTGCCCATTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp TCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGCTGCTaGAGCTCCGGGTCAGGTTGGAGCTCATGGAAGAGGAGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: SPARASHGHCGCYRC*SSGSGWSSWKRRWG
Trigger: CCCCCACCTCCTCTTCCATGAGCTCCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp GCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGCTaGTGGAGCTCCGGGTCAGGTTGGAGCTCATGGAAGAGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: ASPARASHGHCGCYR*WSSGSGWSSWKRRW
Trigger: CCACCTCCTCTTCCATGAGCTCCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp GTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATaGTATCGCTGCTGGAGCTCCGGGTCAGGTTGGAGCTCATGGAAG +
Preference number: 1 (lower is better)
Translates to: VSAASPARASHGHCG*YRCWSSGSGWSSWK
Trigger: CTTCCATGAGCTCCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp AGACACGGTGGGAGCGGAGTTTTGTGTCTCCTGGCCGGCGGCTCCTaGTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTG +
Preference number: 1 (lower is better)
Translates to: RHGGSGVLCLLAGGS*FSQATRLTAPLLVL
Trigger: CAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAACCAGGAGCCGCCGGCCAGGAGACACAAAACTCCGCTCCCACCGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp GGCGGCATCATCCAAGAAGGGCAGCTGGCTTTCCGGGGTGCCATCTaGGGTCTCTGGCAAGAAGTCGCCAGGTCCTGCAGGGTCATCCAC +
Preference number: 1 (lower is better)
Translates to: GGIIQEGQLAFRGAI*GLWQEVARSCRVIH
Trigger: GTGGATGACCCTGCAGGACCTGGCGACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGATGATGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp TCCTGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTaGATGCTATCGCTGCTGGAGCTCCGGGTCAGGTTGGAGCTCATG +
Preference number: 1 (lower is better)
Translates to: SCVRCFTSPGFPRTL*MLSLLELRVRLELM
Trigger: CATGAGCTCCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp CTCCATCCTGCACAGGTGAGGCTAGTGCGGGGCTGGCAAAGCTTGTaGTCGGGAGGAGGGAAGGGTCTGGCCTTAGGTGTCAGAGAGGCA +
Preference number: 1 (lower is better)
Translates to: LHPAQVRLVRGWQSL*SGGGKGLALGVREA
Trigger: TGCCTCTCTGACACCTAAGGCCAGACCCTTCCCTCCTCCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCTCACCTGTGCAGGATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp GCGCCACCCCACGGCTGGCTAGCAGACCAAGCTACGTTCTTTCATTaGCTCCTATGGGACACAGCATGGGCCAATGCCTGCCTGGCCTGC +
Preference number: 1 (lower is better)
Translates to: APPHGWLADQATFFH*LLWDTAWANACLAC
Trigger: GCAGGCCAGGCAGGCATTGGCCCATGCTGTGTCCCATAGGAGCCAATGAAAGAACGTAGCTTGGTCTGCTAGCCAGCCGTGGGGTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp AGCTTGCTGACACCTTTGATTCAAGCCTGGCGCAGCGGGACTGGCTaGGCTCACCTGAGTCTTAAAGGGGCCGCCCACAGAGCCAGGCAG +
Preference number: 1 (lower is better)
Translates to: SLLTPLIQAWRSGTG*AHLSLKGAAHRARQ
Trigger: CTGCCTGGCTCTGTGGGCGGCCCCTTTAAGACTCAGGTGAGCTCAGCCAGTCCCGCTGCGCCAGGCTTGAATCAAAGGTGTCAGCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp GTACGCAACCTACTCCATCCTGCACAGGTGAGGCTAGTGCGGGGCTaGCAAAGCTTGTGGTCGGGAGGAGGGAAGGGTCTGGCCTTAGGT +
Preference number: 1 (lower is better)
Translates to: VRNLLHPAQVRLVRG*QSLWSGGGKGLALG
Trigger: ACCTAAGGCCAGACCCTTCCCTCCTCCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCTCACCTGTGCAGGATGGAGTAGGTTGCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 90 bp GCTAGAACGTGTGCCGCGGTGAGGCTGCCACCACCAGGACTCTTCTaGAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTG +
Preference number: 1 (lower is better)
Translates to: ARTCAAVRLPPPGLF*RMRREQSGCVRLCV
Trigger: CACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTCCTGGTGGTGGCAGCCTCACCGCGGCACACGTTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 90 bp ACTGTGTTCACCTGCCTTCCCCCATGTACGCAACCTACTCCATCCTaGACAGGTGAGGCTAGTGCGGGGCTGGCAAAGCTTGTGGTCGGG +
Preference number: 1 (lower is better)
Translates to: TVFTCLPPCTQPTPS*TGEASAGLAKLVVG
Trigger: CCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCTCACCTGTGCAGGATGGAGTAGGTTGCGTACATGGGGGAAGGCAGGTGAACACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp TCTTCACATCCTTCTCACAGAGTCCGGAACCTTGCTGGGGCTGTCTaGCCGGCCTGTGCACCTCTGCAGGTGGAGCAGCTTCCTCCAACA +
Preference number: 1 (lower is better)
Translates to: SSHPSHRVRNLAGAV*PACAPLQVEQLPPT
Trigger: TGTTGGAGGAAGCTGCTCCACCTGCAGAGGTGCACAGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGTGAGAAGGATGTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp TCGGGGTTCCCTGGGGCTCATGCAAGAAGGAAGATTCACTCAAAGTaGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGG +
Preference number: 1 (lower is better)
Translates to: SGFPGAHARRKIHSK*CPGSQRRWTGQPHW
Trigger: CCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTCTTGCATGAGCCCCAGGGAACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 90 bp CCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCTGTCTGCTaGCGCCACAGCTTGTTGTGCCGCTGTTTGCTTGCATCCAAGATG +
Preference number: 1 (lower is better)
Translates to: PAGSSTGCWRLLSVC*RHSLLCRCLLASKM
Trigger: CATCTTGGATGCAAGCAAACAGCGGCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp TACCCAGCTCTCTTGCCAGAGGTGAAGGGGGTCCCCTCGCTGAGTTaGGTGTTTAGAGGAGCCCTGCTAGGTGGCCAGCCAATGAGAAGA +
Preference number: 1 (lower is better)
Translates to: YPALLPEVKGVPSLS*VFRGALLGGQPMRR
Trigger: TCTTCTCATTGGCTGGCCACCTAGCAGGGCTCCTCTAAACACGCAACTCAGCGAGGGGACCCCCTTCACCTCTGGCAAGAGAGCTGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp TCATGCAGCAAGGCCGACAGGAAGGACAGTGGAGGACTGGTGATCTaGTTATCGGGACTCCTGTCTGAGACAGTGACTGAAGCCGGGGCC +
Preference number: 1 (lower is better)
Translates to: SCSKADRKDSGGLVI*LSGLLSETVTEAGA
Trigger: GGCCCCGGCTTCAGTCACTGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCTGTCGGCCTTGCTGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp CCCTGGGGCTCATGCAAGAAGGAAGATTCACTCAAAGTGGTGTCCTaGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCT +
Preference number: 1 (lower is better)
Translates to: PWGSCKKEDSLKVVS*ESATVDGSASLDRS
Trigger: AGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTCTTGCATGAGCCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp TTACTGGAAAAGTCCACTCCCAGCAAGATATTCTCCTCGGTGTCCTaGCGCCCGCTGCTGTACACCACCACCATGTACCGGACCCGGTCC +
Preference number: 1 (lower is better)
Translates to: LLEKSTPSKIFSSVS*RPLLYTTTMYRTRS
Trigger: GGACCGGGTCCGGTACATGGTGGTGGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAATATCTTGCTGGGAGTGGACTTTTCCAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR TCA 90 bp AGAGTTTTCTGCGAGGCCAAGAATGAGCTAGAACGTGTGCCGCGGTaGGGCTGCCACCACCAGGACTCTTCTGCAGGATGCGAAGGGAAC +
Preference number: 1 (lower is better)
Translates to: RVFCEAKNELERVPR*GCHHQDSSAGCEGN
Trigger: GTTCCCTTCGCATCCTGCAGAAGAGTCCTGGTGGTGGCAGCCTCACCGCGGCACACGTTCTAGCTCATTCTTGGCCTCGCAGAAAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 90 bp CCTGTGCTGGTCAAACACGTAACAACACAACCAGGACAGGGCGCCTaGACCACCATTCGGGCACAGAGTCAGCTCAACAACAGCGTGGGA +
Preference number: 1 (lower is better)
Translates to: PVLVKHVTTQPGQGA*TTIRAQSQLNNSVG
Trigger: TCCCACGCTGTTGTTGAGCTGACTCTGTGCCCGAATGGTGGTGCAGGCGCCCTGTCCTGGTTGTGTTGTTACGTGTTTGACCAGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp TCTAGTTTCTTCTTCACATCCTTCTCACAGAGTCCGGAACCTTGCTaGGGCTGTCTGGCCGGCCTGTGCACCTCTGCAGGTGGAGCAGCT +
Preference number: 1 (lower is better)
Translates to: SSFFFTSFSQSPEPC*GCLAGLCTSAGGAA
Trigger: AGCTGCTCCACCTGCAGAGGTGCACAGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGTGAGAAGGATGTGAAGAAGAAACTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 90 bp GCTCTTTGGTGTGCTTGCGGACCAAGCCTGCCTTCTGCAGCTGAATaGTGGACTCCTGGTGCTGCATCAGGTAGCTGTTGGTTGTCGGCT +
Preference number: 1 (lower is better)
Translates to: ALWCACGPSLPSAAE*WTPGAASGSCWLSA
Trigger: AGCCGACAACCAACAGCTACCTGATGCAGCACCAGGAGTCCATCATTCAGCTGCAGAAGGCAGGCTTGGTCCGCAAGCACACCAAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp GCGCCTGCACCACCATTCGGGCACAGAGTCAGCTCAACAACAGCGTaGGACTACTCATCTGATGACTTTACTCAGCAGTGCTTGGGGCTG +
Preference number: 1 (lower is better)
Translates to: APAPPFGHRVSSTTA*DYSSDDFTQQCLGL
Trigger: CAGCCCCAAGCACTGCTGAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCCCGAATGGTGGTGCAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp GTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATaGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATG +
Preference number: 1 (lower is better)
Translates to: VPFGEAAEISFPFPR*ALVDLSIWALSRTM
Trigger: CATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 90 bp CGTTGGGACAGCTCCTCTTGCTGTTGTTGTTTAGGTTCTCCGAGTTaGGCAGGTTTTGATCGAGCTGGGTTGGAAGCTGCCCCCACCTCC +
Preference number: 1 (lower is better)
Translates to: RWDSSSCCCCLGSPS*AGFDRAGLEAAPTS
Trigger: GGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAAAACCTGCTCAACTCGGAGAACCTAAACAACAACAGCAAGAGGAGCTGTCCCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp GAGCAATCTGTATGCTTAAGCAACAGGGTGCCAAGGAGAAGGGCTTaGCACCCAGCAGAGAGCTATTCAACAGCCCAGAGGTTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: EQSVCLSNRVPRRRA*HPAESYSTAQRLAG
Trigger: CCCAGCCAACCTCTGGGCTGTTGAATAGCTCTCTGCTGGGTGGCAAGCCCTTCTCCTTGGCACCCTGTTGCTTAAGCATACAGATTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp GCCTCGGCCTCTCAAGGTGTTGGGATAACAGGCGTCAAGCCACCGTaGCCAAATTTGTCTTTTAGAGTCGGATGCTGGAGCATCCTCTCC +
Preference number: 1 (lower is better)
Translates to: ASASQGVGITGVKPP*PNLSFRVGCWSILS
Trigger: GGAGAGGATGCTCCAGCATCCGACTCTAAAAGACAAATTTGGGCACGGTGGCTTGACGCCTGTTATCCCAACACCTTGAGAGGCCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp GGAGCAGAATGGGCTTGGACAGTACAGCTGTCTGTGTGCACCTGGTaGGCAATCTGTATGCTTAAGCAACAGGGTGCCAAGGAGAAGGGC +
Preference number: 1 (lower is better)
Translates to: GAEWAWTVQLSVCTW*AICMLKQQGAKEKG
Trigger: GCCCTTCTCCTTGGCACCCTGTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCCAAGCCCATTCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp GGGCAAGATGGAATTGTGGAAGAGCTTCAGCCAACTGTGTTCACCTaGCTTCCCCCATGTACGCAACCTACTCCATCCTGCACAGGTGAG +
Preference number: 1 (lower is better)
Translates to: GQDGIVEELQPTVFT*LPPCTQPTPSCTGE
Trigger: CTCACCTGTGCAGGATGGAGTAGGTTGCGTACATGGGGGAAGGCAGGTGAACACAGTTGGCTGAAGCTCTTCCACAATTCCATCTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 90 bp CTTGGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATaGTTAAGCAACAGGGTGCCAAGGAGAAGGGCTTGCCACCCAGCA +
Preference number: 1 (lower is better)
Translates to: LGQYSCLCAPGEQSV*LSNRVPRRRACHPA
Trigger: TGCTGGGTGGCAAGCCCTTCTCCTTGGCACCCTGTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp TGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTaGGAGCGGAGTTTTGTGTCTCCTGGCCGGCGGCTCCTGGTTCTC +
Preference number: 1 (lower is better)
Translates to: CVHVLPKTWFFLKTR*ERSFVSPGRRLLVL
Trigger: GAGAACCAGGAGCCGCCGGCCAGGAGACACAAAACTCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp ATGCGGATCCTCCCCAGCAAAACCACCTCCACTGTAGATGTGATCTaGGATCGTGCCCAACCGCGAGACAGTTACTCTGAGGAGGAAATC +
Preference number: 1 (lower is better)
Translates to: MRILPSKTTSTVDVI*DRAQPRDSYSEEEI
Trigger: GATTTCCTCCTCAGAGTAACTGTCTCGCGGTTGGGCACGATCCCAGATCACATCTACAGTGGAGGTGGTTTTGCTGGGGAGGATCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp CCCTTTCCGTCTCCTCCACCTGCAGCAAGGAGCCGCTCCGACCTTTaGGACTCCCAAACTCTAGTTTCTTCTTCACATCCTTCTCACAGA +
Preference number: 1 (lower is better)
Translates to: PFPSPPPAARSRSDL*DSQTLVSSSHPSHR
Trigger: TCTGTGAGAAGGATGTGAAGAAGAAACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCTCCTTGCTGCAGGTGGAGGAGACGGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp CGCTGCTGGAGCTCCGGGTCAGGTTGGAGCTCATGGAAGAGGAGGTaGGGGTGTAGCAGATGGTCTTCAGAAAGTCTTTTGAGAAACTAC +
Preference number: 1 (lower is better)
Translates to: RCWSSGSGWSSWKRR*GCSRWSSESLLRNY
Trigger: GTAGTTTCTCAAAAGACTTTCTGAAGACCATCTGCTACACCCCCACCTCCTCTTCCATGAGCTCCAACCTGACCCGGAGCTCCAGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 90 bp TCTCCAGGCCAGGCTATTAAGCATCAAGTCCAGAATGCTTCACTCTaGTCTGTGGACGGGACCAGCGCTCTCGTCTGGATGTTGATATGC +
Preference number: 1 (lower is better)
Translates to: SPGQAIKHQVQNASL*SVDGTSALVWMLIC
Trigger: GCATATCAACATCCAGACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATGCTTAATAGCCTGGCCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 90 bp GGCCGTGCTGAGGGTCTGTTCTGTTCAAGCTCAGCTCCACACTGCTaGAAACTCTGGACTTCTCCAGGGGAAAAGGGCTTTAGATTACTG +
Preference number: 1 (lower is better)
Translates to: GRAEGLFCSSSAPHC*KLWTSPGEKGFRLL
Trigger: CAGTAATCTAAAGCCCTTTTCCCCTGGAGAAGTCCAGAGTTTGCAGCAGTGTGGAGCTGAGCTTGAACAGAACAGACCCTCAGCACGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp CAGGGCCGTGCTGAGGGTCTGTTCTGTTCAAGCTCAGCTCCACACTaGTGCAAACTCTGGACTTCTCCAGGGGAAAAGGGCTTTAGATTA +
Preference number: 1 (lower is better)
Translates to: QGRAEGLFCSSSAPH*CKLWTSPGEKGFRL
Trigger: TAATCTAAAGCCCTTTTCCCCTGGAGAAGTCCAGAGTTTGCAGCAGTGTGGAGCTGAGCTTGAACAGAACAGACCCTCAGCACGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp CAACAGCGTGGGACTACTCATCTGATGACTTTACTCAGCAGTGCTTaGGGCTGTCGGGTTAAAAGTCTTGACACGTCTGGGGTCCCAACC +
Preference number: 1 (lower is better)
Translates to: QQRGTTHLMTLLSSA*GCRVKSLDTSGVPT
Trigger: GGTTGGGACCCCAGACGTGTCAAGACTTTTAACCCGACAGCCCCAAGCACTGCTGAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp CCCAATAGCCTTTGGAGCAAGAAGTGGGTCCAATTTCCCAGGGGCTaGGGGCTTCATCTCCAACTCATCTGCTTCCTTGCTGAAACCACA +
Preference number: 1 (lower is better)
Translates to: PNSLWSKKWVQFPRG*GLHLQLICFLAETT
Trigger: TGTGGTTTCAGCAAGGAAGCAGATGAGTTGGAGATGAAGCCCCCAGCCCCTGGGAAATTGGACCCACTTCTTGCTCCAAAGGCTATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp GAGGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATaGGCAGCCCTGTGTGGCAAATCAAACCAGGGGTCAGCAACTTTT +
Preference number: 1 (lower is better)
Translates to: EAEGFTFTQFLPTGP*AALCGKSNQGSATF
Trigger: AAAAGTTGCTGACCCCTGGTTTGATTTGCCACACAGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 90 bp AAGGGGTCGATCCAAATCCACAGTGAAAGTGAGGGAGGGATCATATaGAAATATCCGCCCAGCCTGACGCAGCAAAAGGCGGGTCAGCTT +
Preference number: 1 (lower is better)
Translates to: KGSIQIHSESEGGII*KYPPSLTQQKAGQL
Trigger: AAGCTGACCCGCCTTTTGCTGCGTCAGGCTGGGCGGATATTTTCATATGATCCCTCCCTCACTTTCACTGTGGATTTGGATCGACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp CTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTaGTTAGTTTCTTCTCCTCCTCTCTATGGCAAGAGTAGGGGAAAA +
Preference number: 1 (lower is better)
Translates to: LPGHTTDSSPSCAAC*LVSSPPLYGKSRGK
Trigger: TTTTCCCCTACTCTTGCCATAGAGAGGAGGAGAAGAAACTAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp ATTCACGGGAACCCACTGGCAGCTTCTGGAAAACCAAACAACTCATaGTGTGGAGCTCCTGATTGGGGAAGGGACAGGGATTGGTCTGTA +
Preference number: 1 (lower is better)
Translates to: IHGNPLAASGKPNNS*CGAPDWGRDRDWSV
Trigger: TACAGACCAATCCCTGTCCCTTCCCCAATCAGGAGCTCCACACCATGAGTTGTTTGGTTTTCCAGAAGCTGCCAGTGGGTTCCCGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp TCCTGGGTGGAGCTCTCCTTTAGAAAGGGCTTCTTTACCATAAAGTaGATCCCCCTAAGTTCCAAGCCGTCCTCTGTGCTGCCTTTGGAG +
Preference number: 1 (lower is better)
Translates to: SWVELSFRKGFFTIK*IPLSSKPSSVLPLE
Trigger: CTCCAAAGGCAGCACAGAGGACGGCTTGGAACTTAGGGGGATTCACTTTATGGTAAAGAAGCCCTTTCTAAAGGAGAGCTCCACCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp TGGGGACAGGGGTCATTCAACAACCTTCATTTGGTTTGCAATGTCTaGAGGAATCTGGGTAGTGGGACCAAGACAAGTGAGCCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: WGQGSFNNLHLVCNV*RNLGSGTKTSEPAL
Trigger: CAGAGCAGGCTCACTTGTCTTGGTCCCACTACCCAGATTCCTGCAGACATTGCAAACCAAATGAAGGTTGTTGAATGACCCCTGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp AGGGCGGCACTGGTCACAGTTTCATTCCAGATCGTTAAGGTGATTTaGTCTGTGGCTCAGGTGACACAGTGTGTCTGGATGCACATGATC +
Preference number: 1 (lower is better)
Translates to: RAALVTVSFQIVKVI*SVAQVTQCVWMHMI
Trigger: GATCATGTGCATCCAGACACACTGTGTCACCTGAGCCACAGAGCAAATCACCTTAACGATCTGGAATGAAACTGTGACCAGTGCCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp CCACATGGCCTGGACAGACACAGGCTTAAATATGTGCATCCTTCCTaGTGTGCTCACGCTGAACCCACCATCTCCATCAAGGTGGATTTT +
Preference number: 1 (lower is better)
Translates to: PHGLDRHRLKYVHPS*CAHAEPTISIKVDF
Trigger: AAAATCCACCTTGATGGAGATGGTGGGTTCAGCGTGAGCACAGCAGGAAGGATGCACATATTTAAGCCTGTGTCTGTCCAGGCCATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR CCA 90 bp AGGGACCTTGCTAGAAGGCTCGGAAGTAGCCGTAAGACAAAGAAATaGAAATCGGCATTGTCAATTACCATCCGAGAGCAGCCCCGGTTC +
Preference number: 1 (lower is better)
Translates to: RDLARRLGSSRKTKK*KSALSITIREQPRF
Trigger: GAACCGGGGCTGCTCTCGGATGGTAATTGACAATGCCGATTTCCATTTCTTTGTCTTACGGCTACTTCCGAGCCTTCTAGCAAGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp GGAGATCAAGATGCATCTTTGTCTGGCTTCTTTCTACTTCTGGGGTaGGAGAGACAGCTCTGGGAAGGGTTTCAGATGATGAGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: GDQDASLSGFFLLLG*ERQLWEGFQMMREQ
Trigger: CTGCTCCCTCATCATCTGAAACCCTTCCCAGAGCTGTCTCTCCCACCCCAGAAGTAGAAAGAAGCCAGACAAAGATGCATCTTGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp GCTTCCTTGCTGAAACCACAAGGGAGATCAAGATGCATCTTTGTCTaGCTTCTTTCTACTTCTGGGGTGGGAGAGACAGCTCTGGGAAGG +
Preference number: 1 (lower is better)
Translates to: ASLLKPQGRSRCIFV*LLSTSGVGETALGR
Trigger: CCTTCCCAGAGCTGTCTCTCCCACCCCAGAAGTAGAAAGAAGCCAGACAAAGATGCATCTTGATCTCCCTTGTGGTTTCAGCAAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp CTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCTGGATGTTaGTATGCTAGCTGTGCTTCCAAAAATGAATGGGTAAGTTTGCCA +
Preference number: 1 (lower is better)
Translates to: LHSALWTGPALSSGC*YASCASKNEWVSLP
Trigger: TGGCAAACTTACCCATTCATTTTTGGAAGCACAGCTAGCATATCAACATCCAGACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 90 bp GAGGGTCTGTTCTGTTCAAGCTCAGCTCCACACTGCTGCAAACTCTaGACTTCTCCAGGGGAAAAGGGCTTTAGATTACTGGAATGCTCT +
Preference number: 1 (lower is better)
Translates to: EGLFCSSSAPHCCKL*TSPGEKGFRLLECS
Trigger: AGAGCATTCCAGTAATCTAAAGCCCTTTTCCCCTGGAGAAGTCCAGAGTTTGCAGCAGTGTGGAGCTGAGCTTGAACAGAACAGACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp GGTCATTCAACAACCTTCATTTGGTTTGCAATGTCTGCAGGAATCTaGGTAGTGGGACCAAGACAAGTGAGCCTGCTCTGTGCTAGCCAG +
Preference number: 1 (lower is better)
Translates to: GHSTTFIWFAMSAGI*VVGPRQVSLLCASQ
Trigger: CTGGCTAGCACAGAGCAGGCTCACTTGTCTTGGTCCCACTACCCAGATTCCTGCAGACATTGCAAACCAAATGAAGGTTGTTGAATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp AAGGTATGTGATAAACATAACCTGGTTTTAGGAGGCAAGGATGCGTaGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTTAGAAAGGGC +
Preference number: 1 (lower is better)
Translates to: KVCDKHNLVLGGKDA*VGGVSWVELSFRKG
Trigger: GCCCTTTCTAAAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAAACCAGGTTATGTTTATCACATACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp TGTAGATGTGATCTGGGATCGTGCCCAACCGCGAGACAGTTACTCTaGGGAGGAAATCAGGGCAAAAGCAGCCCATTACAGGAATATTGT +
Preference number: 1 (lower is better)
Translates to: CRCDLGSCPTARQLL*GGNQGKSSPLQEYC
Trigger: ACAATATTCCTGTAATGGGCTGCTTTTGCCCTGATTTCCTCCTCAGAGTAACTGTCTCGCGGTTGGGCACGATCCCAGATCACATCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp AAACTCTGGACTTCTCCAGGGGAAAAGGGCTTTAGATTACTGGAATaGTCTTTAGCTGAAGAGGACAGGGTGGAGCAGAATGGGCTTGGA +
Preference number: 1 (lower is better)
Translates to: KLWTSPGEKGFRLLE*SLAEEDRVEQNGLG
Trigger: TCCAAGCCCATTCTGCTCCACCCTGTCCTCTTCAGCTAAAGAGCATTCCAGTAATCTAAAGCCCTTTTCCCCTGGAGAAGTCCAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp GCTATGGCATATGTTACAGTGCAAACTTCCTTTTCACAGACAGCATaGATTCGTCTTTGCCCAGGTGTCCCGACACCTGACAGAATGCTC +
Preference number: 1 (lower is better)
Translates to: AMAYVTVQTSFSQTA*IRLCPGVPTPDRML
Trigger: GAGCATTCTGTCAGGTGTCGGGACACCTGGGCAAAGACGAATTCATGCTGTCTGTGAAAAGGAAGTTTGCACTGTAACATATGCCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 90 bp TCCAACTCATCTGCTTCCTTGCTGAAACCACAAGGGAGATCAAGATaGATCTTTGTCTGGCTTCTTTCTACTTCTGGGGTGGGAGAGACA +
Preference number: 1 (lower is better)
Translates to: SNSSASLLKPQGRSR*IFVWLLSTSGVGET
Trigger: TGTCTCTCCCACCCCAGAAGTAGAAAGAAGCCAGACAAAGATGCATCTTGATCTCCCTTGTGGTTTCAGCAAGGAAGCAGATGAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp GCAGCTTCTGGAAAACCAAACAACTCATGGTGTGGAGCTCCTGATTaGGGAAGGGACAGGGATTGGTCTGTACCTACATTTTGTTGCAAA +
Preference number: 1 (lower is better)
Translates to: AASGKPNNSWCGAPD*GRDRDWSVPTFCCK
Trigger: TTTGCAACAAAATGTAGGTACAGACCAATCCCTGTCCCTTCCCCAATCAGGAGCTCCACACCATGAGTTGTTTGGTTTTCCAGAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 90 bp ATCTCAGAAACATACAGATTGCTGGGGCCCATCCCACCCCATTCATaGCTGGAACCCAAAGAGAATTTGTTAGCTATCTTCAACCTTGCC +
Preference number: 1 (lower is better)
Translates to: ISETYRLLGPIPPHS*LEPKENLLAIFNLA
Trigger: GGCAAGGTTGAAGATAGCTAACAAATTCTCTTTGGGTTCCAGCCATGAATGGGGTGGGATGGGCCCCAGCAATCTGTATGTTTCTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp CCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGGTGAGATaGCTTAATAGGATCTTGACTAAATTATGTAGCATTTGTTCCCAC +
Preference number: 1 (lower is better)
Translates to: PTNGRQLPLQMPQVR*LNRILTKLCSICSH
Trigger: GTGGGAACAAATGCTACATAATTTAGTCAAGATCCTATTAAGTCATCTCACCTGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 90 bp TCTGTGGCTCAGGTGACACAGTGTGTCTGGATGCACATGATCACTTaGCTCGGTTTCTATACTCAAATATACAGATGCAGAGTGAACTCA +
Preference number: 1 (lower is better)
Translates to: SVAQVTQCVWMHMIT*LGFYTQIYRCRVNS
Trigger: TGAGTTCACTCTGCATCTGTATATTTGAGTATAGAAACCGAGTCAAGTGATCATGTGCATCCAGACACACTGTGTCACCTGAGCCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp AAGGTTGCATACAAAGCAAGGGCCAAGCTATGGCATATGTTACAGTaGAAACTTCCTTTTCACAGACAGCATGAATTCGTCTTTGCCCAG +
Preference number: 1 (lower is better)
Translates to: KVAYKARAKLWHMLQ*KLPFHRQHEFVFAQ
Trigger: CTGGGCAAAGACGAATTCATGCTGTCTGTGAAAAGGAAGTTTGCACTGTAACATATGCCATAGCTTGGCCCTTGCTTTGTATGCAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 90 bp TTCATCAGTCTTTTGAGTCCAGTTGAGAGACAGAGCAAGTCCAGATaGACTGAACAAAATACTTCCTGGCTCTGCAGGCACTGGAATTTA +
Preference number: 1 (lower is better)
Translates to: FISLLSPVERQSKSR*TEQNTSWLCRHWNL
Trigger: TAAATTCCAGTGCCTGCAGAGCCAGGAAGTATTTTGTTCAGTTCATCTGGACTTGCTCTGTCTCTCAACTGGACTCAAAAGACTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 90 bp TCATATCTTTCTTGGGTGACGATTCTTCCTTTATTACCACTTCTGTaGTGGGAGGGTTCTTATCACAGTGAGAATTCTTCAAAAGGAGGG +
Preference number: 1 (lower is better)
Translates to: SYLSWVTILPLLPLL*WEGSYHSENSSKGG
Trigger: CCCTCCTTTTGAAGAATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACCCAAGAAAGATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 90 bp TATCTTTCTTGGGTGACGATTCTTCCTTTATTACCACTTCTGTGCTaGGAGGGTTCTTATCACAGTGAGAATTCTTCAAAAGGAGGGACT +
Preference number: 1 (lower is better)
Translates to: YLSWVTILPLLPLLC*EGSYHSENSSKGGT
Trigger: AGTCCCTCCTTTTGAAGAATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACCCAAGAAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 90 bp AATGACGATGATGATGACGATGTATCAGACTGTTTTGGCAAGGGCTaGGGAAGCAGTTTCCTTTTATATAAACTCAGTCATCAGGAATTT +
Preference number: 1 (lower is better)
Translates to: NDDDDDDVSDCFGKG*GSSFLLYKLSHQEF
Trigger: AAATTCCTGATGACTGAGTTTATATAAAAGGAAACTGCTTCCTCAGCCCTTGCCAAAACAGTCTGATACATCGTCATCATCATCGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 90 bp CTGCCCTCCTGGAGCCTGCTGGTGGTAGGAACGGGGGAGGTTCGGTaGGGCCAGAGGCTGGCTTCTCCGGAACACGGGACCTGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LPSWSLLVVGTGEVR*GQRLASPEHGTCWP
Trigger: TGGCCAGCAGGTCCCGTGTTCCGGAGAAGCCAGCCTCTGGCCCAACCGAACCTCCCCCGTTCCTACCACCAGCAGGCTCCAGGAGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCCTGGCCGGCGGCTCCTaGTTCTCCCAGGCCACACGA +
Preference number: 2 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVLAGGS*FSQATR
Trigger: TCGTGTGGCCTGGGAGAACCAGGAGCCGCCGGCCAG...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGGGTAGGAAGGCTGGCTaGGTGCAGATGGCGGGAGCA +
Preference number: 2 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLGRKAG*VQMAGA
Trigger: TGCTCCCGCCATCTGCACCCAGCCAGCCTTCCTACC...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGGGCCCTAAGCCGGGCTaGGCGGCATCATCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSGPKPG*AASSKK
Trigger: CTTCTTGGATGATGCCGCCCAGCCCGGCTTAGGGCC...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGCTGGCTGGGTGCAGATaGCGGGAGCATTGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSLAGCR*REHWGP
Trigger: AGGACCCCAATGCTCCCGCCATCTGCACCCAGCCAG...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCTCGTGGAGCGCGGCTaGATCCTGGCTCTCCTCGGG +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGLVERG*ILALLG
Trigger: CCCGAGGAGAGCCAGGATCCAGCCGCGCTCCACGAG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CAA 90 bp CTACTCCATCCTGCACAGGTGAGGCTAGTGCGGGGCTGGCAAAGCTaGTGGTCGGGAGGAGGGAAGGGTCTGGCCTTAGGTGTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LLHPAQVRLVRGWQS*WSGGGKGLALGVRE
Trigger: CTCTCTGACACCTAAGGCCAGACCCTTCCCTCCTCCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCTCACCTGTGCAGGATGGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CAA 90 bp TGCGCCACCCCACGGCTGGCTAGCAGACCAAGCTACGTTCTTTCATaGGCTCCTATGGGACACAGCATGGGCCAATGCCTGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: CATPRLASRPSYVLS*APMGHSMGQCLPGL
Trigger: CAGGCCAGGCAGGCATTGGCCCATGCTGTGTCCCATAGGAGCCAATGAAAGAACGTAGCTTGGTCTGCTAGCCAGCCGTGGGGTGGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCACGCCACAGCTTGTTGTaGCGCTGTTTGCTTGCATCC +
Preference number: 2 (lower is better)
Translates to: WVQMAGALGSSHRSLEASRHSLL*RCLLAS
Trigger: GGATGCAAGCAAACAGCGGCACAACAAGCTGTGGCG...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCCGGAACACGGGACCTaGTGGCCAAGTGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVPEHGT*WPSGPQ
Trigger: CTGTGGCCCACTTGGCCAGCAGGTCCCGTGTTCCGG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTGCTGGCCTCCAGCCTaGTGGCAGGGCCATCCCTGG +
Preference number: 2 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHCWPPA*WQGHPW
Trigger: CCAGGGATGGCCCTGCCAGCAGGCTGGAGGCCAGCA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTGGCCTCCAGCCTGCTaGCAGGGCCATCCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCWPPAC*QGHPWR
Trigger: CCTCCAGGGATGGCCCTGCCAGCAGGCTGGAGGCCA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGAGCTCCGGGTCAGGTTaGAGCTCATGGAAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSSSGSG*SSWKRR
Trigger: CCTCCTCTTCCATGAGCTCCAACCTGACCCGGAGCT...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGTTCCCACGGACACTGTaGATGCTATCGCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLFPRTL*MLSLLE
Trigger: CTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAA...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp CTTCACATCCTTCTCACAGAGTCCGGAACCTTGCTGGGGCTGTCTGGCCGGCCTCTGCTGTCTGTCTGCTaGCGCCACAGCTTGTTGTGC +
Preference number: 2 (lower is better)
Translates to: LHILLTESGTLLGLSGRPLLSVC*RHSLLC
Trigger: GCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAG...AGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGTGAGAAGGATGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCAGAGTTGAGCAGGTTTTaGTCGAGCTGGGTTGGAAGC +
Preference number: 2 (lower is better)
Translates to: WVQMAGALGSSHRSLEASELSRF*SSWVGS
Trigger: GCTTCCAACCCAGCTCGATCAAAACCTGCTCAACTC...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGAGCGGGGGCGGCCTCTaGCTTCTCATCACTCCCGGC +
Preference number: 2 (lower is better)
Translates to: SCVSAADTQQCRWALPLESGGGL*LLITPG
Trigger: GCCGGGAGTGATGAGAAGTCAGAGGCCGCCCCCGCT...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGCTGGCTTTCCGGGGTaGCATCTGGGGTCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGAGFPG*HLGSLA
Trigger: TGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCAGCTGGGTTGGAAGCTaGCCCCACCTCCCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCSWVGS*PHLPAP
Trigger: GGGAGCAGGGAGGTGGGGGCAGCTTCCAACCCAGCT...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGGCGAAGGGAACAGTCTaGATGTGTGCGCCTATGTGT +
Preference number: 2 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLAKGTV*MCAPMC
Trigger: ACACATAGGCGCACACATCCAGACTGTTCCCTTCGC...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCTGGCGCAGCGGGACTaGCTGAGCTCACCTGAGTCT +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGLAQRD*LSSPES
Trigger: AGACTCAGGTGAGCTCAGCCAGTCCCGCTGCGCCAG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTAGTCCGGAACCTTGCTaGGGCTGTCTGGCCGGCCTG +
Preference number: 2 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPSPEPC*GCLAGL
Trigger: CAGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACT...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTCATCACTCCCGGCCTaGCTGGGCATAACCAGGGGG +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGSSLPA*LGITRG
Trigger: CCCCCTGGTTATGCCCAGCCAGGCCGGGAGTGATGA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCTGGCTGAGCTCACCTaGGTCTTAAAGGGGCCGCCC +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCLAELT*VLKGPP
Trigger: GGGCGGCCCCTTTAAGACTCAGGTGAGCTCAGCCAG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGCACCCAGGCTGGAGTaGAGTGGCGCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: LAPTISHQWKATPSPDASAPRLE*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp GAAGGAAGATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCGGGTCATCCACAGGCTaGTGGAGGCTGCTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: EGRFTQSGVLGVSDGGRVGSSTG*WRLLSV
Trigger: GACAGACAGCAGCCTCCAGCAGCCTGTGGATGACCC...GACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCTCCCTCACTGCTGCTaGGAAGAGCTGGAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEILPHCC*EELEGN
Trigger: GTTTCCCTCCAGCTCTTCCCAGCAGCAGTGAGGGAG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGAGATGGCGGGAGCATTaGGGTCCTCACATCGCTCCC +
Preference number: 2 (lower is better)
Translates to: KVRLPSLARECERFSGEERWREH*GPHIAP
Trigger: GGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCT...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGGGGAGGACGTGATGTaGGGTAGGAAGGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPGEDVM*GRKAGW
Trigger: CCAGCCAGCCTTCCTACCCCACATCACGTCCTCCCC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGAGCGCGGCTGGATCCTaGCTCTCCTCGGGGATGCTG +
Preference number: 2 (lower is better)
Translates to: SCVSAADTQQCRWALPLESAAGS*LSSGML
Trigger: CAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGCT...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACGAACGTGTGCCGCGGTaGGGCTGCCACCACCAGGAC +
Preference number: 2 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNERVPR*GCHHQD
Trigger: GTCCTGGTGGTGGCAGCCTCACCGCGGCACACGTTC...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCTGCGAGGCCAAGAATaGGCTAGAACGTGTGCCGCG +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCLRGQE*ARTCAA
Trigger: CGCGGCACACGTTCTAGCTCATTCTTGGCCTCGCAG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTTTCGGGGAAGCCGCTaGAATCTCCTTTCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIFRGSR*NLLSLP
Trigger: GGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAA...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCGCAGCGGGACTGGCTaGGCTCACCTGAGTCTTAAA +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGRSGTG*AHLSLK
Trigger: TTTAAGACTCAGGTGAGCTCAGCCAGTCCCGCTGCG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGCGCAGCGGGACTGGCTaGGCTCACCTGAGTCTTAAA +
Preference number: 2 (lower is better)
Translates to: KVRLPSLARECERFSGEERSGTG*AHLSLK
Trigger: TTTAAGACTCAGGTGAGCTCAGCCAGTCCCGCTGCG...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACGTACTCCAGCCTAGGTaGCAGAGCCAGGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHVLQPR*QSQALS
Trigger: AGACAGGGCCTGGCTCTGTCACCTAGGCTGGAGTAC...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTCTGGCGGACCCAGCTaGGGGCAAGATGGAATTGTG +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGSGGPS*GQDGIV
Trigger: CACAATTCCATCTTGCCCTCAGCTGGGTCCGCCAGA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGTCTGGCGGACCCAGCTaGGGGCAAGATGGAATTGTG +
Preference number: 2 (lower is better)
Translates to: KVRLPSLARECERFSGEESGGPS*GQDGIV
Trigger: CACAATTCCATCTTGCCCTCAGCTGGGTCCGCCAGA...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACGCTCTGTGGCTCAGGTaGCACAGTGTGTCTGGATGC +
Preference number: 2 (lower is better)
Translates to: PLEPLPNILPRGGSPGINALWLR*HSVSGC
Trigger: GCATCCAGACACACTGTGTCACCTGAGCCACAGAGC...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCCGCGTTGGGGCGCGTaGTGCTGCGCTTCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: SCVSAADTQQCRWALPLEPRWGA*CCASAL
Trigger: TAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCGG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGTTAGGTTCTCCGAGTTaGGCAGGTTTTGATCGAGCT +
Preference number: 2 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLLGSPS*AGFDRA
Trigger: AGCTCGATCAAAACCTGCTCAACTCGGAGAACCTAA...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGCTCACGGGGCCACATaGCATAGTTTGCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGAHGAT*HSLLTP
Trigger: AGGGGTCAGCAAACTATGGCATGTGGCCCCGTGAGC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCCTGCCTCCTCTGCCTaGCTCTTTCCTGTGCCACTT +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGPASSA*LFPVPL
Trigger: AAGTGGCACAGGAAAGAGGCAGGCAGAGGAGGCAGG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTAATGCCTGCCTGGCCTaGAGGAACCGCCAGTGTTGT +
Preference number: 2 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLNACLA*RNRQCC
Trigger: ACAACACTGGCGGTTCCTGCAGGCCAGGCAGGCATT...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp CTTCACATCCTTCTCACAGAGTCCGGAACCTTGCTGGGGCTGTCTGGCCGGCCTGACTCACGCCCATTTTaGAATGCACCAGGCACTTGG +
Preference number: 2 (lower is better)
Translates to: LHILLTESGTLLGLSGRPDSRPF*NAPGTW
Trigger: CCAAGTGCCTGGTGCATTGCAAAATGGGCGTGAGTC...AGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGTGAGAAGGATGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCTGTCTGGCCGGCCTGTaGACCTCTGCAGGTGGAGCA +
Preference number: 2 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSCLAGL*TSAGGA
Trigger: TGCTCCACCTGCAGAGGTGCACAGGCCGGCCAGACA...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCATCCCTGGAGGGAGGTaGTGGGTCTGCAGGCACGCT +
Preference number: 2 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSIPGGR*WVCRHA
Trigger: AGCGTGCCTGCAGACCCAGCACCTCCCTCCAGGGAT...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGGAGTTTTGTGTCTCCTaGCCGGCGGCTCCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQEFCVS*PAAPGS
Trigger: AGAACCAGGAGCCGCCGGCCAGGAGACACAAAACTC...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCATTCTTGAAGACACGGTaGGAGCGGAGTTTTGTGTCT +
Preference number: 2 (lower is better)
Translates to: WVQMAGALGSSHRSLEASFLKTR*ERSFVS
Trigger: AGACACAAAACTCCGCTCCCACCGTGTCTTCAAGAA...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGTCCAAGAAGGGCAGCTaGCTTTCCGGGGTGCCATCT +
Preference number: 2 (lower is better)
Translates to: KVRLPSLARECERFSGEESKKGS*LSGVPS
Trigger: AGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGA...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATGGTTGGGCCAGAGGCTaGCTTCTCCGGAACACGGGA +
Preference number: 2 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDGWARG*LLRNTG
Trigger: TCCCGTGTTCCGGAGAAGCCAGCCTCTGGCCCAACC...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp GAACCCACCATCTCCATCAAGGTGGATTTTCGTGTCGCTCCACAGTCGGAGAACTTCTCCTCGGTGTCCTaGCGCCCGCTGCTGTACACC +
Preference number: 2 (lower is better)
Translates to: EPTISIKVDFRVAPQSENFSSVS*RPLLYT
Trigger: GGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAA...GTTCTCCGACTGTGGAGCGACACGAAAATCCACCTTGATGGAGATGGTGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR CAA 90 bp TCCAAGCCGTCCTCTGTGCTGCCTTTGGAGCCTCTCCCGAACATCTaGCCAAGAGGGGGTTCCCCAGGCATAAACACAAACAAGCATGCG +
Preference number: 2 (lower is better)
Translates to: SKPSSVLPLEPLPNI*PRGGSPGINTNKHA
Trigger: CGCATGCTTGTTTGTGTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGGCAGCACAGAGGACGGCTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCGTAAAAGCCATCGCTTaGGCCAGGGAGGTTGATGCT +
Preference number: 2 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIVKAIA*AREVDA
Trigger: AGCATCAACCTCCCTGGCTCAAGCGATGGCTTTTAC...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCTTGGCAAGAGAGTGTaGGCGCTTCAGTGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVLGKRV*ALQWGR
Trigger: TCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGTGGGGCGGGTTTCCCTaGTGGTTTGGAGGTTGCAGC +
Preference number: 2 (lower is better)
Translates to: SCVSAADTQQCRWALPLEWGGFP*WFGGCS
Trigger: GCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCA...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCCACCAGGACTCTTCTaGAGGATGCGAAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVPPGLF*RMRREQ
Trigger: CTGTTCCCTTCGCATCCTGCAGAAGAGTCCTGGTGG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCCACCAGGACTCTTCTaGAGGATGCGAAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQPPGLF*RMRREQ
Trigger: CTGTTCCCTTCGCATCCTGCAGAAGAGTCCTGGTGG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGCAGACACTCAACAATaGAGGTGGGCCCTTCCCCTT +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVADTQQ*RWALPL
Trigger: AAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCAGAATGCTTCACTCTaGTCTGTGGACGGGACCAGC +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVQNASL*SVDGTS
Trigger: GCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCCAAGGAGAAGGGCTTaGCACCCAGCAGAGAGCTAT +
Preference number: 2 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLPRRRA*HPAESY
Trigger: ATAGCTCTCTGCTGGGTGGCAAGCCCTTCTCCTTGG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCTTGCGGACCAAGCCTaGCTTCTGCAGCTGAATGAT +
Preference number: 2 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEILADQA*LLQLND
Trigger: ATCATTCAGCTGCAGAAGGCAGGCTTGGTCCGCAAG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TCAAGGTGGATTTTCGTGTCGCTCCACAGTCGGAGAACCATCCCAATGGTGCAGTGTCCTGGCGCCCGCTaGTGTACACCACCACCATGT +
Preference number: 2 (lower is better)
Translates to: SRWIFVSLHSRRTIPMVQCPGAR*CTPPPC
Trigger: ACATGGTGGTGGTGTACAGCAGCGGGCGCCAGGACA...CTGCACCATTGGGATGGTTCTCCGACTGTGGAGCGACACGAAAATCCACCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR-3UTR CCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGTTACTCAGCAGTGCTTaGGGCTGTCGGGTTAAAAGT +
Preference number: 2 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSLLSSA*GCRVKS
Trigger: ACTTTTAACCCGACAGCCCCAAGCACTGCTGAGTAA...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCAGGCTAGTGCGGGGCTaGCAAAGCTTGTGGTCGGGA +
Preference number: 2 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSRLVRG*QSLWSG
Trigger: TCCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCT...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGGGCAAGATGGAATTGTaGAAGAGCTTCAGCCAACTG +
Preference number: 2 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSGKMEL*KSFSQL
Trigger: CAGTTGGCTGAAGCTCTTCCACAATTCCATCTTGCC...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCATCCTCCATGCCGTTaGGACAGCTCCTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGHPPCR*DSSSCC
Trigger: ACAGCAAGAGGAGCTGTCCCAACGGCATGGAGGATG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCTCAAAGTGGTGTCCTaGGAGTCAGCGACGGTGGAC +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCLKVVS*ESATVD
Trigger: GTCCACCGTCGCTGACTCCCAGGACACCACTTTGAG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CAA 90 bp TCACCAAATACATGTGCCCCATACATTTCCCAGTCTCCCTGGCTGTaGCATTGGGACCCTGTGACTGGGCCCTGCCCACTGGAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: SPNTCAPYISQSPWL*HWDPVTGPCPLESK
Trigger: CTTGCTTTCCAGTGGGCAGGGCCCAGTCACAGGGTCCCAATGCAACAGCCAGGGAGACTGGGAAATGTATGGGGCACATGTATTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGAGGGAGGGATCATATaGAAATATCCGCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGEGGII*KYPPSL
Trigger: CAGGCTGGGCGGATATTTTCATATGATCCCTCCCTC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGGGGGAAAAGTTAGGATaGCTTCACTCGTTTAAGGGA +
Preference number: 2 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSGEKLG*LHSFKG
Trigger: TCCCTTAAACGAGTGAAGTCATCCTAACTTTTCCCC...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCCCAGGCCACACGACTaGCAGCTCCCCTTCTTGTGC +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLPRPHD*QLPFLC
Trigger: GCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp CCACCATCTCCATCAAGGTGGATTTTCGTGTCGCTCCACAGTCGGAGAACCATCGGCGCACTGCCAGCTTaGTTCTGTCTTCGCAACGCA +
Preference number: 2 (lower is better)
Translates to: PPSPSRWIFVSLHSRRTIGALPA*FCLRNA
Trigger: TGCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCC...GATGGTTCTCCGACTGTGGAGCGACACGAAAATCCACCTTGATGGAGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCTTATACTCCCTCACTaGTGCTGGGAAGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVLILPH*CWEELE
Trigger: CTCCAGCTCTTCCCAGCAGCAGTGAGGGAGTATAAG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGGAAGGCTGGCTGGGTaGAGATGGCGGGAGCATTGG +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLGRLAG*RWREHW
Trigger: CCAATGCTCCCGCCATCTGCACCCAGCCAGCCTTCC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp CCCGGGGAAGTAGTTGTGCCTCCGGGCCACTTCGCAGGCCTTGTGAAGCACCTGGAACCATCCCAATGGTaGAGCTTTTACTTTCCTTAC +
Preference number: 2 (lower is better)
Translates to: PGEVVVPPGHFAGLVKHLEPSQW*SFYFPY
Trigger: GTAAGGAAAGTAAAAGCTGCACCATTGGGATGGTTC...CAGGTGCTTCACAAGGCCTGCGAAGTGGCCCGGAGGCACAACTACTTCCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGCTGGCCGGCGGCTCCTaGTTCTCCCAGGCCACACGA +
Preference number: 2 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWELAGGS*FSQATR
Trigger: TCGTGTGGCCTGGGAGAACCAGGAGCCGCCGGCCAG...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACTTTCCCTTCCCTAGATaGGCCCTAGTGGACCTAAGC +
Preference number: 2 (lower is better)
Translates to: PLEPLPNILPRGGSPGINFPFPR*ALVDLS
Trigger: GCTTAGGTCCACTAGGGCCCATCTAGGGAAGGGAAA...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCTCCCTCACTGCTGCTaGGAAGAGCTGGAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: SCVSAADTQQCRWALPLELPHCC*EELEGN
Trigger: GTTTCCCTCCAGCTCTTCCCAGCAGCAGTGAGGGAG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGATGAGCAGCCCTGTGTaGCAAATCAAACCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGMSSPV*QIKPGV
Trigger: GACCCCTGGTTTGATTTGCCACACAGGGCTGCTCAT...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTTCCGGGGTGCCATCTaGGGTCTCTGGCAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDFRGAI*GLWQEV
Trigger: GACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTCCGGATCCTCCAGGTaGACCAAGCTGCCAGTTTCA +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCSGSSR*TKLPVS
Trigger: TGAAACTGGCAGCTTGGTCCACCTGGAGGATCCGGA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CAA 90 bp TGTGTGCGCCTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTaGAAGACACGGTGGGAGCGGAGTTTTGTGTCTCCTGGCCGGCGG +
Preference number: 2 (lower is better)
Translates to: CVRLCVHVLPKTWFF*KTRWERSFVSPGRR
Trigger: CCGCCGGCCAGGAGACACAAAACTCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAGGCGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CAA 90 bp TCCCTTTCCGTCTCCTCCACCTGCAGCAAGGAGCCGCTCCGACCTTaGGGACTCCCAAACTCTAGTTTCTTCTTCACATCCTTCTCACAG +
Preference number: 2 (lower is better)
Translates to: SLSVSSTCSKEPLRP*GLPNSSFFFTSFSQ
Trigger: CTGTGAGAAGGATGTGAAGAAGAAACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCTCCTTGCTGCAGGTGGAGGAGACGGAAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGAGGGAGGGATCATATaGAAATATCCGCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPEGGII*KYPPSL
Trigger: CAGGCTGGGCGGATATTTTCATATGATCCCTCCCTC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGAACGTGTGCCGCGGTaGGGCTGCCACCACCAGGAC +
Preference number: 2 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFERVPR*GCHHQD
Trigger: GTCCTGGTGGTGGCAGCCTCACCGCGGCACACGTTC...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCGTGGGCCCTTCCCCTTaGGATTTAAACTTCAGCATT +
Preference number: 2 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIVGPSP*DLNFSI
Trigger: AATGCTGAAGTTTAAATCTCAAGGGGAAGGGCCCAC...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTTTCGGGGAAGCCGCTaGAATCTCCTTTCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDFRGSR*NLLSLP
Trigger: GGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGTCACTAGGTAAAATATaGACTAGCCTTGTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLSLGKI*TSLVPA
Trigger: TGCAGGAACAAGGCTAGTTCATATTTTACCTAGTGA...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGACTCTTCTGCAGGATaGGAAGGGAACAGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGDSSAG*EGNSLD
Trigger: ATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGGACTCTTCTGCAGGATaGGAAGGGAACAGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: KVRLPSLARECERFSGEEDSSAG*EGNSLD
Trigger: ATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGCAGACACTCAACAATaGAGGTGGGCCCTTCCCCTT +
Preference number: 2 (lower is better)
Translates to: LAPTISHQWKATPSPDASADTQQ*RWALPL
Trigger: AAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCAACCTACTCCATCCTaGACAGGTGAGGCTAGTGCG +
Preference number: 2 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDQPTPS*TGEASA
Trigger: CGCACTAGCCTCACCTGTGCAGGATGGAGTAGGTTG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGTCATACTCAGACAGCTaGCTCATAAAGCCCGCGTTG +
Preference number: 2 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQSYSDS*LIKPAL
Trigger: CAACGCGGGCTTTATGAGGCAGCTGTCTGAGTATGA...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCAGCTGAGGGCAAGATaGAATTGTGGAAGAGCTTCA +
Preference number: 2 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIQLRAR*NCGRAS
Trigger: TGAAGCTCTTCCACAATTCCATCTTGCCCTCAGCTG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTTCACTGAGTTAATCTaGCGGACCCAGCTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCFTELI*RTQLRA
Trigger: TGCCCTCAGCTGGGTCCGCCAGATTAACTCAGTGAA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCAGGCTATGCTTTTGTTaGCTGAGGGAAAGGGGGAAC +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVRLCFC*LRERGN
Trigger: GTTCCCCCTTTCCCTCAGCCAACAAAAGCATAGCCT...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACACACCCAGGGCGGCACTaGTCACAGTTTCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: RKDSGGLVICLSGLLSETHPGRH*SQFHSR
Trigger: TCTGGAATGAAACTGTGACCAGTGCCGCCCTGGGTG...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 90 bp AAATACATGTGCCCCATACATTTCCCAGTCTCCCTGGCTGTTGCATaGGGACCCTGTGACTGGGCCCTGCCCACTGGAAAGCAAGTAGAA +
Preference number: 2 (lower is better)
Translates to: KYMCPIHFPVSLAVA*GPCDWALPTGKQVE
Trigger: TTCTACTTGCTTTCCAGTGGGCAGGGCCCAGTCACAGGGTCCCAATGCAACAGCCAGGGAGACTGGGAAATGTATGGGGCACATGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCAATTCAGCTGGTCCTTaGAGGCTTTCTGGTTTCACT +
Preference number: 2 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEINSAGP*RLSGFT
Trigger: AGTGAAACCAGAAAGCCTTCAAGGACCAGCTGAATT...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp GAGGCTGCTGTCTGTCTGCTGACGCCACAGCTTGTTGTGCCGCTGTTTGCTTGCCTCCCCTTCTTGTGCTaGATGTTGGTTAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: EAAVCLLTPQLVVPLFACLPFLC*MLVSFF
Trigger: GAAGAAACTAACCAACATGCAGCACAAGAAGGGGAG...GCAAGCAAACAGCGGCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCAGCTCCCCTTCTTGTaGTGCATGTTGGTTAGTTTC +
Preference number: 2 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQQLPFL*CMLVSF
Trigger: GAAACTAACCAACATGCAGCACAAGAAGGGGAGCTG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGCATCAAGTCCAGAATaGTTCACTCTGCTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGASSPE*FTLLCG
Trigger: TCCACAGAGCAGAGTGAAGCATTCTGGACTTGATGC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGGTGAGCAATCTGTATaGTTAAGCAACAGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLGEQSV*LSNRVP
Trigger: TGGCACCCTGTTGCTTAAGCATACAGATTGCTCACC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCACGGACACTGTGGATaGTATCGCTGCTGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLHGHCG*YRCWSS
Trigger: GGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGTTCTTGAAGACACGGTaGGAGCGGAGTTTTGTGTCT +
Preference number: 2 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQFLKTR*ERSFVS
Trigger: AGACACAAAACTCCGCTCCCACCGTGTCTTCAAGAA...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCTTACTCAGCAGTGCTTaGGGCTGTCGGGTTAAAAGT +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVLLSSA*GCRVKS
Trigger: ACTTTTAACCCGACAGCCCCAAGCACTGCTGAGTAA...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACATTCACTGAGTTAATCTaGCGGACCCAGCTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: RKDSGGLVICLSGLLSETFTELI*RTQLRA
Trigger: TGCCCTCAGCTGGGTCCGCCAGATTAACTCAGTGAA...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACAGGCTATGCTTTTGTTaGCTGAGGGAAAGGGGGAAC +
Preference number: 2 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHRLCFC*LRERGN
Trigger: GTTCCCCCTTTCCCTCAGCCAACAAAAGCATAGCCT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCTTTGGCAGGACTTTTaGGGTCTCTCTGGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHLWQDF*GLSGRF
Trigger: GAACCTTCCAGAGAGACCCCAAAAGTCCTGCCAAAG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGAAACATGGTTCTTCTTaGAGACACGGTGGGAGCGGA +
Preference number: 2 (lower is better)
Translates to: SCVSAADTQQCRWALPLEKHGSS*RHGGSG
Trigger: TCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTT...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGCTGCGAGGCCAAGAATaGGCTAGAACGTGTGCCGCG +
Preference number: 2 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWELRGQE*ARTCAA
Trigger: CGCGGCACACGTTCTAGCTCATTCTTGGCCTCGCAG...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTTTTTCACAGACAGCATaGATTCGTCTTTGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLFSQTA*IRLCPG
Trigger: ACCTGGGCAAAGACGAATTCATGCTGTCTGTGAAAA...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTCTCAGATTCATTACTaGACAGAAGCCTCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGSQIHY*TEASGP
Trigger: AGGACCTGAGGCTTCTGTTCAGTAATGAATCTGAGA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCTCCCCTTCTTGTGCTaGATGTTGGTTAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQLPFLC*MLVSFF
Trigger: GAAGAAACTAACCAACATGCAGCACAAGAAGGGGAG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGGTGTGCGCCTATGTGTaGACGTTCTTCCTAAAACAT +
Preference number: 2 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQVCAYV*TFFLKH
Trigger: ATGTTTTAGGAAGAACGTGCACACATAGGCGCACAC...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp GAAGGAAGATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCGTGTGCGCCTATGTGTaGACGTTCTTCCTAAAACAT +
Preference number: 2 (lower is better)
Translates to: EGRFTQSGVLGVSDGGRVVCAYV*TFFLKH
Trigger: ATGTTTTAGGAAGAACGTGCACACATAGGCGCACAC...GACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCGGCCTGTGCACCTCTaGAGGTGGAGCAGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFRPVHL*RWSSFL
Trigger: GAGGAAGCTGCTCCACCTGCAGAGGTGCACAGGCCG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTAGGGCCACTGGTGTCTaGCCTCCTGGAGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIRATGV*PPGACW
Trigger: CCAGCAGGCTCCAGGAGGGCAGACACCAGTGGCCCT...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGCTCTTTGGTGTGCTTaGGGACCAAGCCTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLALWCA*GPSLPS
Trigger: AGAAGGCAGGCTTGGTCCGCAAGCACACCAAAGAGC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp ACAGACACAGGCTTAAATATGTGCATCCTTCCTGCTGTGCTCACGCTGAACCCAGCTCTCCAGGCGCACTaGCAGCTTGATTCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: TDTGLNMCILPAVLTLNPALQAH*QLDSVF
Trigger: GAAGACAGAATCAAGCTGGCAGTGCGCCTGGAGAGC...TGGGTTCAGCGTGAGCACAGCAGGAAGGATGCACATATTTAAGCCTGTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR-3UTR CCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGCTTTCAGAATTCAGCTaGTCCTTGAAGGCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: KVRLPSLARECERFSGEELSEFS*SLKAFW
Trigger: CCAGAAAGCCTTCAAGGACCAGCTGAATTCTGAAAG...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGCAAGGGCCAAGCTATaGCATATGTTACAGTGCAAA +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVARAKL*HMLQCK
Trigger: TTTGCACTGTAACATATGCCATAGCTTGGCCCTTGC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCTTTTGAGAAACTACTaGTGTGGTCCAGGCGGTAGA +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCLLRNY*CGPGGR
Trigger: TCTACCGCCTGGACCACACCAGTAGTTTCTCAAAAG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACAAGATTCACTCAAAGTaGTGTCCTGGGAGTCAGCGA +
Preference number: 2 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHKIHSK*CPGSQR
Trigger: TCGCTGACTCCCAGGACACCACTTTGAGTGAATCTT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CAA 90 bp AGAAGGCTCGGAAGTAGCCGTAAGACAAAGAAATGGAAATCGGCATaGTCAATTACCATCCGAGAGCAGCCCCGGTTCTCCTCTTCCCGT +
Preference number: 2 (lower is better)
Translates to: RRLGSSRKTKKWKSA*SITIREQPRFSSSR
Trigger: ACGGGAAGAGGAGAACCGGGGCTGCTCTCGGATGGTAATTGACAATGCCGATTTCCATTTCTTTGTCTTACGGCTACTTCCGAGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCTCAGAACCACCACCTaGGCCAGACACTTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLLRTTT*ARHLSN
Trigger: ATTGCTCAAGTGTCTGGCTCAGGTGGTGGTTCTGAG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATGTACTCCAGCCTAGGTaGCAGAGCCAGGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHVLQPR*QSQALS
Trigger: AGACAGGGCCTGGCTCTGTCACCTAGGCTGGAGTAC...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTGGCCAATGTTAAGATaGTGGCTCACTCACTCACTT +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCWPMLR*WLTHSL
Trigger: AAGTGAGTGAGTGAGCCATCATCTTAACATTGGCCA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTGGCCAATGTTAAGATaGTGGCTCACTCACTCACTT +
Preference number: 2 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHWPMLR*WLTHSL
Trigger: AAGTGAGTGAGTGAGCCATCATCTTAACATTGGCCA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCTGTGCTTCCAAAAATaGATGGGTAAGTTTGCCAGA +
Preference number: 2 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLLCFQK*MGKFAR
Trigger: TCTGGCAAACTTACCCATTCATTTTTGGAAGCACAG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGGGAATGCTCTTTAGCTaGAGAGGACAGGGTGGAGCA +
Preference number: 2 (lower is better)
Translates to: FLLVREENPPKVQILSWWGMLFS*RGQGGA
Trigger: TGCTCCACCCTGTCCTCTTCAGCTAAAGAGCATTCC...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCTTCAGAAAGTCTTTTaGGAAACTACTGGTGTGGTC +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVLQKVF*ETTGVV
Trigger: GACCACACCAGTAGTTTCTCAAAAGACTTTCTGAAG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp GAACCCACCATCTCCATCAAGGTGGATTTTCGTGTCGCTCCACAGTCGGAGAACCGCAACGCAGAAGGTTaGTCATCACCTGAAGATGTT +
Preference number: 2 (lower is better)
Translates to: EPTISIKVDFRVAPQSENRNAEG*SSPEDV
Trigger: AACATCTTCAGGTGATGATCAACCTTCTGCGTTGCG...GTTCTCCGACTGTGGAGCGACACGAAAATCCACCTTGATGGAGATGGTGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACATCCGAGAGTTTTCTaGGAGGCCAAGAATGAGCTA +
Preference number: 2 (lower is better)
Translates to: LAPTISHQWKATPSPDASHPRVF*EAKNEL
Trigger: TAGCTCATTCTTGGCCTCGCAGAAAACTCTCGGATG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCTTATACTCCCTCACTaGTGCTGGGAAGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLLILPH*CWEELE
Trigger: CTCCAGCTCTTCCCAGCAGCAGTGAGGGAGTATAAG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTGCTTGCATCCAAGATaGCTTCATACTCAGACAGCT +
Preference number: 2 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHCLHPR*LHTQTA
Trigger: AGCTGTCTGAGTATGAAGGCATCTTGGATGCAAGCA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTGGGACAGCTCCTCTTaGTGTTGTTGTTTAGGTTCT +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCWDSSS*CCCLGS
Trigger: AGAACCTAAACAACAACAGCAAGAGGAGCTGTCCCA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCATCTCCTGTGTCCGCTaGTTCACCAGCCCGGGCTTC +
Preference number: 2 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFISCVR*FTSPGF
Trigger: GAAGCCCGGGCTGGTGAAGCAGCGGACACAGGAGAT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGTCTTGTGCTGCATGTTaGTTAGTTTCTTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQSCAAC*LVSSPP
Trigger: AGGAGGAGAAGAAACTAACCAACATGCAGCACAAGA...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTCAGAGCATTATTCCCTaGAACAAGCCTTGGTCATTC +
Preference number: 2 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPQSIIP*NKPWSF
Trigger: GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTG...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGGCAAGATGGAATTGTaGAAGAGCTTCAGCCAACTG +
Preference number: 2 (lower is better)
Translates to: RKDSGGLVICLSGLLSETGKMEL*KSFSQL
Trigger: CAGTTGGCTGAAGCTCTTCCACAATTCCATCTTGCC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCAGCCGCTCCGACCTTTaGGACTCCCAAACTCTAGTT +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLSRSDL*DSQTLV
Trigger: AACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCT...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGCCGCTCTAGCTCTTTaGTGTGCTTGCGGACCAAGC +
Preference number: 2 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEAALAL*CACGPS
Trigger: GCTTGGTCCGCAAGCACACCAAAGAGCTAGAGCGGC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CAA 90 bp GCCTTGTTCCTGCAGATCCCTCCTGGGGTGCTTTCTAGAATAGCTTaGGGGAACACAGTTCTGGCCAATGTTAAGATGATGGCTCACTCA +
Preference number: 2 (lower is better)
Translates to: ALFLQIPPGVLSRIA*GNTVLANVKMMAHS
Trigger: TGAGTGAGCCATCATCTTAACATTGGCCAGAACTGTGTTCCCCAAAGCTATTCTAGAAAGCACCCCAGGAGGGATCTGCAGGAACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACAAACATGGTTCTTCTTaGAGACACGGTGGGAGCGGA +
Preference number: 2 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNKHGSS*RHGGSG
Trigger: TCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTT...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp TTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGTGAGAATTCTGGCTGAGCTCACCTaGGTCTTAAAGGGGCCGCCC +
Preference number: 2 (lower is better)
Translates to: FFLYYHFCAGRVLITVRILAELT*VLKGPP
Trigger: GGGCGGCCCCTTTAAGACTCAGGTGAGCTCAGCCAG...AATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACATGCCATAGTTTGCTaGCCCCTGAATTCAACCTTT +
Preference number: 2 (lower is better)
Translates to: LAPTISHQWKATPSPDASHAIVC*PLNSTF
Trigger: AAAGGTTGAATTCAGGGGTCAGCAAACTATGGCATG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCTTCCTACAGGGCCATaGGCAGCCCTGTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFLPTGP*AALCGK
Trigger: TTTGCCACACAGGGCTGCTCATGGCCCTGTAGGAAG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTCACTAGGTAAAATATaGACTAGCCTTGTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGSLGKI*TSLVPA
Trigger: TGCAGGAACAAGGCTAGTTCATATTTTACCTAGTGA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCTGTGCTTCCAAAAATaGATGGGTAAGTTTGCCAGA +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCLCFQK*MGKFAR
Trigger: TCTGGCAAACTTACCCATTCATTTTTGGAAGCACAG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCAACAGTCTGGATGTGTaGGCCTATGTGTGCACGTTC +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLNSLDV*AYVCTF
Trigger: GAACGTGCACACATAGGCGCACACATCCAGACTGTT...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACGACACCTGACAGAATaGTCATCTTGTTCATACAGC +
Preference number: 2 (lower is better)
Translates to: LAPTISHQWKATPSPDASRHLTE*SSCSYS
Trigger: GCTGTATGAACAAGATGAGCATTCTGTCAGGTGTCG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTTCTTGTGCTGCATGTTaGTTAGTTTCTTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPSCAAC*LVSSPP
Trigger: AGGAGGAGAAGAAACTAACCAACATGCAGCACAAGA...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCCCTGGAACAAGCCTTaGTCATTCGTGTGTTTTAAA +
Preference number: 2 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCPWNKP*SFVCFK
Trigger: TTTAAAACACACGAATGACCAAGGCTTGTTCCAGGG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTAGGCTAGTGCGGGGCTaGCAAAGCTTGTGGTCGGGA +
Preference number: 2 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIRLVRG*QSLWSG
Trigger: TCCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCT...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATGCAAGGGCCAAGCTATaGCATATGTTACAGTGCAAA +
Preference number: 2 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDARAKL*HMLQCK
Trigger: TTTGCACTGTAACATATGCCATAGCTTGGCCCTTGC...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATATTAGCGGGGCAAGGTaGTGCACGCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHISGAR*CTPVVP
Trigger: TGGGACTACAGGCGTGCACCACCTTGCCCCGCTAAT...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGGGGCGAGGAGGTCTGTaGTCTCTTCATCGTAGACTC +
Preference number: 2 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQGRGGL*SLHRRL
Trigger: GAGTCTACGATGAAGAGACCACAGACCTCCTCGCCC...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGCTCAGAACCACCACCTaGGCCAGACACTTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWELRTTT*ARHLSN
Trigger: ATTGCTCAAGTGTCTGGCTCAGGTGGTGGTTCTGAG...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCAGCTCCCCTTCTTGTaGTGCATGTTGGTTAGTTTC +
Preference number: 2 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLQLPFL*CMLVSF
Trigger: GAAACTAACCAACATGCAGCACAAGAAGGGGAGCTG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCTGGCATATGTTACAGTaGAAACTTCCTTTTCACAGA +
Preference number: 2 (lower is better)
Translates to: HQVQNASLCSVDGTSALVWHMLQ*KLPFHR
Trigger: TCTGTGAAAAGGAAGTTTGCACTGTAACATATGCCA...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR GCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAACACAGGCATTCCACTaGAGAGCAGATGATAACAAA +
Preference number: 2 (lower is better)
Translates to: RKDSGGLVICLSGLLSETTQAFH*RADDNK
Trigger: TTTGTTATCATCTGCTCTGCAGTGGAATGCCTGTGT...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCTGAGGTGGGAGGATTaGTTGAGGCAGGAGGATCAC +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHLRWED*LRQEDH
Trigger: GTGATCCTCCTGCCTCAAGCAATCCTCCCACCTCAG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACTCCAAAAAGCATGTGTaGAATGTAATTAGCAAAGCG +
Preference number: 2 (lower is better)
Translates to: PLEPLPNILPRGGSPGINSKKHV*NVISKA
Trigger: CGCTTTGCTAATTACATTGCACACATGCTTTTTGGA...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGAGCTCAACAACAGCGTaGGACTACTCATCTGATGAC +
Preference number: 2 (lower is better)
Translates to: FLLVREENPPKVQILSWWSSTTA*DYSSDD
Trigger: GTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCT...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCAATTTCCCAGGGGCTaGGGGCTTCATCTCCAACTC +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHQFPRG*GLHLQL
Trigger: GAGTTGGAGATGAAGCCCCCAGCCCCTGGGAAATTG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 90 bp GTGTTTAGAGGAGCCCTGCTAGGTGGCCAGCCAATGAGAAGAGTTTaGGGCAAAATGTATTCTGGCACCAACAATTTCCCACCAATGGAA +
Preference number: 2 (lower is better)
Translates to: VFRGALLGGQPMRRV*GKMYSGTNNFPPME
Trigger: TTCCATTGGTGGGAAATTGTTGGTGCCAGAATACATTTTGCCCAAAACTCTTCTCATTGGCTGGCCACCTAGCAGGGCTCCTCTAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 90 bp TTACTGAACAGAAGCCTCAGGTCCTTGGCTGGCTTCATATCTTTCTaGGGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: LLNRSLRSLAGFISF*GDDSSFITTSVLGG
Trigger: CCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACCCAAGAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTCTGTTCAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAGCTTTGTTTATAAAATaGTACGCTTCATTCCAGTGG +
Preference number: 2 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLALFIK*YASFQW
Trigger: CCACTGGAATGAAGCGTATCATTTTATAAACAAAGC...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGAACAGTCTGGATGTGTaGGCCTATGTGTGCACGTTC +
Preference number: 2 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWENSLDV*AYVCTF
Trigger: GAACGTGCACACATAGGCGCACACATCCAGACTGTT...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTGTGGACCTAAGCATCTaGGCTCTCAGCAGGACGATG +
Preference number: 2 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIVDLSI*ALSRTM
Trigger: CATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCAC...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGCTTTCAGAATTCAGCTaGTCCTTGAAGGCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: FLLVREENPPKVQILSWWLSEFS*SLKAFW
Trigger: CCAGAAAGCCTTCAAGGACCAGCTGAATTCTGAAAG...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTTACATGCAACTGATCTaGGTTTCCAAAAATAAACCT +
Preference number: 2 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLYMQLI*VSKNKP
Trigger: AGGTTTATTTTTGGAAACCCAGATCAGTTGCATGTA...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp CGCGTTGGGGCGCGTGATGCTGCGCTTCTGCTTTACATAGTTATATGCTTTTTCACCAGGCACTTGGAATaGTTCCTCTTCGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: RVGARDAALLLYIVICFFTRHLE*FLFALF
Trigger: AAACAAAGCGAAGAGGAACCATTCCAAGTGCCTGGT...GAAAAAGCATATAACTATGTAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAAGCATTAGCAACAACTaGGAACAACCCATACATTTT +
Preference number: 2 (lower is better)
Translates to: LAPTISHQWKATPSPDASSISNN*EQPIHF
Trigger: AAAATGTATGGGTTGTTCTCAGTTGTTGCTAATGCT...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCTGTTTACATGCAACTaGTCTGGGTTTCCAAAAATA +
Preference number: 2 (lower is better)
Translates to: SCVSAADTQQCRWALPLELFTCN*SGFPKI
Trigger: TATTTTTGGAAACCCAGATCAGTTGCATGTAAACAG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCATATCTTTCTTGGGTaGCGATTCTTCCTTTATTAC +
Preference number: 2 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDHIFLG*RFFLYY
Trigger: GTAATAAAGGAAGAATCGTCACCCAAGAAAGATATG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTGCTATATAAGGTATaGACTACGTACCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLLYKV*TTYPPA
Trigger: TGCTGGTGGGTACGTAGTGCATACCTTATATAGCAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
3UTR-3UTR GCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCAACTGTGTTCACCTaGCTTCCCCCATGTACGCAA +
Preference number: 2 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIPTVFT*LPPCTQ
Trigger: TTGCGTACATGGGGGAAGGCAGGTGAACACAGTTGG...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTGCGAAGGGAACAGTCTaGATGTGTGCGCCTATGTGT +
Preference number: 2 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIAKGTV*MCAPMC
Trigger: ACACATAGGCGCACACATCCAGACTGTTCCCTTCGC...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCCTCAGGTCCTTGGCTaGCTTCATATCTTTCTTGGG +
Preference number: 2 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFPQVLG*LHIFLG
Trigger: CCCAAGAAAGATATGAAGCCAGCCAAGGACCTGAGG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CAA 90 bp CTCTGTGGCTCAGGTGACACAGTGTGTCTGGATGCACATGATCACTaGACTCGGTTTCTATACTCAAATATACAGATGCAGAGTGAACTC +
Preference number: 2 (lower is better)
Translates to: LCGSGDTVCLDAHDH*TRFLYSNIQMQSEL
Trigger: GAGTTCACTCTGCATCTGTATATTTGAGTATAGAAACCGAGTCAAGTGATCATGTGCATCCAGACACACTGTGTCACCTGAGCCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGCATGCCATAGTTTGCTaGCCCCTGAATTCAACCTTT +
Preference number: 2 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQHAIVC*PLNSTF
Trigger: AAAGGTTGAATTCAGGGGTCAGCAAACTATGGCATG...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGAACCTTCATTTGGTTTaGAATGTCTGCAGGAATCTG +
Preference number: 2 (lower is better)
Translates to: FLLVREENPPKVQILSWWNLHLV*NVCRNL
Trigger: CAGATTCCTGCAGACATTGCAAACCAAATGAAGGTT...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCAGCTGAGGGCAAGATaGAATTGTGGAAGAGCTTCA +
Preference number: 2 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFQLRAR*NCGRAS
Trigger: TGAAGCTCTTCCACAATTCCATCTTGCCCTCAGCTG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CAA 90 bp CTTTCCTGTGCCACTTATGTTTGGAATTTTCCCCATCAGCTAAGGTaGCATACAAAGCAAGGGCCAAGCTATGGCATATGTTACAGTGCA +
Preference number: 2 (lower is better)
Translates to: LSCATYVWNFPHQLR*HTKQGPSYGICYSA
Trigger: TGCACTGTAACATATGCCATAGCTTGGCCCTTGCTTTGTATGCAACCTTAGCTGATGGGGAAAATTCCAAACATAAGTGGCACAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CAA 90 bp GTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGCCTCAGGTCCTaGGCTGGCTTCATATCTTTCTTGGGTGACGATTCTTCCTTTATT +
Preference number: 2 (lower is better)
Translates to: VVGFSDSLLNRSLRS*AGFISFLGDDSSFI
Trigger: AATAAAGGAAGAATCGTCACCCAAGAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTCTGTTCAGTAATGAATCTGAGAAGCCGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATGGGGAAAAGTTAGGATaGCTTCACTCGTTTAAGGGA +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHGEKLG*LHSFKG
Trigger: TCCCTTAAACGAGTGAAGTCATCCTAACTTTTCCCC...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCCTGAGCCAGACACTTaGGCAATTTCAAACCTAAAC +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHPEPDT*AISNLN
Trigger: GTTTAGGTTTGAAATTGCTCAAGTGTCTGGCTCAGG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACTGTATCAATGCAAGGTaGAGATGTAGAAAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNCINAR*RCRKVQ
Trigger: CTGAACTTTTCTACATCTTCACCTTGCATTGATACA...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATTCCAGATGCCTCAGGTaGGATGACTTAATAGGATCT +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHSRCLR*DDLIGS
Trigger: AGATCCTATTAAGTCATCTCACCTGAGGCATCTGGA...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR GCA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGTGCTTTTCTGCAAGCTaGCTCTCTCTCGAAATGTTT +
Preference number: 2 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKCFSAS*LSLEMF
Trigger: AAACATTTCGAGAGAGAGGCAGCTTGCAGAAAAGCA...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATTGCTTTTCTGCAAGCTaGCTCTCTCTCGAAATGTTT +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHCFSAS*LSLEMF
Trigger: AAACATTTCGAGAGAGAGGCAGCTTGCAGAAAAGCA...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCCCTGGAACAAGCCTTaGTCATTCGTGTGTTTTAAA +
Preference number: 2 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFPWNKP*SFVCFK
Trigger: TTTAAAACACACGAATGACCAAGGCTTGTTCCAGGG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCAAGGAGACAAAGTCCTaGAGGGAGGATTTTTGCAAA +
Preference number: 2 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFKETKS*REDFCK
Trigger: TTTGCAAAAATCCTCCCTCCAGGACTTTGTCTCCTT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CAA 90 bp AGAGAAATAAACTCTGCTCTTAGGAAATACATGCAACCAGGGACCTaGCTAGAAGGCTCGGAAGTAGCCGTAAGACAAAGAAATGGAAAT +
Preference number: 2 (lower is better)
Translates to: REINSALRKYMQPGT*LEGSEVAVRQRNGN
Trigger: ATTTCCATTTCTTTGTCTTACGGCTACTTCCGAGCCTTCTAGCAAGGTCCCTGGTTGCATGTATTTCCTAAGAGCAGAGTTTATTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGAGCATTAGCAACAACTaGGAACAACCCATACATTTT +
Preference number: 2 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKSISNN*EQPIHF
Trigger: AAAATGTATGGGTTGTTCTCAGTTGTTGCTAATGCT...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR GCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATGTACCTACATTTTGTTaGAAAAGAGCTCAGGACACT +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHVPTFC*KRAQDT
Trigger: AGTGTCCTGAGCTCTTTTGCAACAAAATGTAGGTAC...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCTACCACATGAAATTTaGTTTGGCAAAACATACCGA +
Preference number: 2 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHLPHEI*FGKTYR
Trigger: TCGGTATGTTTTGCCAAATCAAATTTCATGTGGTAG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 90 bp ATCATATCTGCGGTGAGGATTAACTTGGTAATACATGTGAAACCCTaGCAACTAGGAATATATCCTCCAATTCCAACAATAACAACCACC +
Preference number: 2 (lower is better)
Translates to: IISAVRINLVIHVKP*QLGIYPPIPTITTT
Trigger: GGTGGTTGTTATTGTTGGAATTGGAGGATATATTCCTAGTTGCAAGGGTTTCACATGTATTACCAAGTTAATCCTCACCGCAGATATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp ACCAGGGGGCCCAGCTCGTGGAGCGCGGCTGGATCCTaGCTCTCCTCGGGGATGCTGGCCTCCAGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: TRGPSSWSAAGS*LSSGMLASSLL
Trigger: CAGCAGGCTGGAGGCCAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGCTCCACGAGCTGGGCCCCCTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp GGGCATAACCAGGGGGCCCAGCTCGTGGAGCGCGGCTaGATCCTGGCTCTCCTCGGGGATGCTGGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: GHNQGAQLVERG*ILALLGDAGLQ
Trigger: CTGGAGGCCAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGCTCCACGAGCTGGGCCCCCTGGTTATGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp GCGGGGGCGGCCTCTGACTTCTCATCACTCCCGGCCTaGCTGGGCATAACCAGGGGGCCCAGCTCGTGGAGC +
Preference number: 3 (lower is better)
Translates to: AGAASDFSSLPA*LGITRGPSSWS
Trigger: GCTCCACGAGCTGGGCCCCCTGGTTATGCCCAGCCAGGCCGGGAGTGATGAGAAGTCAGAGGCCGCCCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 72 bp GCCAGCCGGAGCCGGGTCTCAATCTCCTGTGTCCGCTaGTTCACCAGCCCGGGCTTCCCACGGACACTGTGG +
Preference number: 3 (lower is better)
Translates to: ASRSRVSISCVR*FTSPGFPRTLW
Trigger: CCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACAGGAGATTGAGACCCGGCTCCGGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp CTGCTGGCCAAGTGGGCCACAGGGGAGGACGTGATGTaGGGTAGGAAGGCTGGCTGGGTGCAGATGGCGGGA +
Preference number: 3 (lower is better)
Translates to: LLAKWATGEDVM*GRKAGWVQMAG
Trigger: TCCCGCCATCTGCACCCAGCCAGCCTTCCTACCCCACATCACGTCCTCCCCTGTGGCCCACTTGGCCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGGGTGGGAGCGGAGTTTaGTGTCTCCTGGCCGGCGGC +
Preference number: 3 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSGGSGV*CLLAGG
Trigger: GCCGCCGGCCAGGAGACACAAAACTCCGCTCCCACC...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp TTCAAGCCTGGCGCAGCGGGACTGGCTGAGCTCACCTaGGTCTTAAAGGGGCCGCCCACAGAGCCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: FKPGAAGLAELT*VLKGPPTEPGS
Trigger: GCTGCCTGGCTCTGTGGGCGGCCCCTTTAAGACTCAGGTGAGCTCAGCCAGTCCCGCTGCGCCAGGCTTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp GCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATaGTATCGCTGCTGGAGCTCCGGGTCAGGTTGGAGC +
Preference number: 3 (lower is better)
Translates to: ASPARASHGHCG*YRCWSSGSGWS
Trigger: GCTCCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp GGGAGCGGAGTTTTGTGTCTCCTGGCCGGCGGCTCCTaGTTCTCCCAGGCCACACGACTGACAGCTCCCCTT +
Preference number: 3 (lower is better)
Translates to: GSGVLCLLAGGS*FSQATRLTAPL
Trigger: AAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAACCAGGAGCCGCCGGCCAGGAGACACAAAACTCCGCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp GGGCAGCTGGCTTTCCGGGGTGCCATCTGGGGTCTCTaGCAAGAAGTCGCCAGGTCCTGCAGGGTCATCCAC +
Preference number: 3 (lower is better)
Translates to: GQLAFRGAIWGL*QEVARSCRVIH
Trigger: GTGGATGACCCTGCAGGACCTGGCGACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp AAGCCGGGCTGGGCGGCATCATCCAAGAAGGGCAGCTaGCTTTCCGGGGTGCCATCTGGGGTCTCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: KPGWAASSKKGS*LSGVPSGVSGK
Trigger: CTTGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGATGATGCCGCCCAGCCCGGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp GCTGGCTTCTCCGGAACACGGGACCTGCTGGCCAAGTaGGCCACAGGGGAGGACGTGATGTGGGGTAGGAAG +
Preference number: 3 (lower is better)
Translates to: AGFSGTRDLLAK*ATGEDVMWGRK
Trigger: CTTCCTACCCCACATCACGTCCTCCCCTGTGGCCCACTTGGCCAGCAGGTCCCGTGTTCCGGAGAAGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp CGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTaGATGCTATCGCTGCTGGAGCTCCGGGTCAGGTTG +
Preference number: 3 (lower is better)
Translates to: RCFTSPGFPRTL*MLSLLELRVRL
Trigger: CAACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp CAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGACGGTaGGGCCCGCCAGCCGGAGCCGGGTCTCAATCTCCT +
Preference number: 3 (lower is better)
Translates to: QESVSASVGKRR*GPPAGAGSQSP
Trigger: AGGAGATTGAGACCCGGCTCCGGCTGGCGGGCCTCACCGTCTCTTCCCCACTGAAGCGCTCACACTCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 72 bp GCCCGGGCTTCCCACGGACACTGTGGATGCTATCGCTaGTGGAGCTCCGGGTCAGGTTGGAGCTCATGGAAG +
Preference number: 3 (lower is better)
Translates to: ARASHGHCGCYR*WSSGSGWSSWK
Trigger: CTTCCATGAGCTCCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 72 bp CCAGCAAGATATTCTCCTCGGTGTCCTGGCGCCCGCTaGTGTACACCACCACCATGTACCGGACCCGGTCCG +
Preference number: 3 (lower is better)
Translates to: PARYSPRCPGAR*CTPPPCTGPGP
Trigger: CGGACCGGGTCCGGTACATGGTGGTGGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAATATCTTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR CCA 72 bp GCACAGGTGAGGCTAGTGCGGGGCTGGCAAAGCTTGTaGTCGGGAGGAGGGAAGGGTCTGGCCTTAGGTGTC +
Preference number: 3 (lower is better)
Translates to: AQVRLVRGWQSL*SGGGKGLALGV
Trigger: GACACCTAAGGCCAGACCCTTCCCTCCTCCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCTCACCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGGGTGGGAGCGGAGTTTaGTGTCTCCTGGCCGGCGGC +
Preference number: 3 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQGGSGV*CLLAGG
Trigger: GCCGCCGGCCAGGAGACACAAAACTCCGCTCCCACC...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp CTCTTGCCAGAGGTGAAGGGGGTCCCCTCGCTGAGTTaGGTGTTTAGAGGAGCCCTGCTAGGTGGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: LLPEVKGVPSLS*VFRGALLGGQP
Trigger: TGGCTGGCCACCTAGCAGGGCTCCTCTAAACACGCAACTCAGCGAGGGGACCCCCTTCACCTCTGGCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 72 bp CGGCATCATCCAAGAAGGGCAGCTGGCTTTCCGGGGTaGCATCTGGGGTCTCTGGCAAGAAGTCGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: RHHPRRAAGFPG*HLGSLARSRQV
Trigger: GACCTGGCGACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGATGATGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp ATCCAAGAAGGGCAGCTGGCTTTCCGGGGTGCCATCTaGGGTCTCTGGCAAGAAGTCGCCAGGTCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: IQEGQLAFRGAI*GLWQEVARSCR
Trigger: CCTGCAGGACCTGGCGACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp CGGGCTTCCCACGGACACTGTGGATGCTATCGCTGCTaGAGCTCCGGGTCAGGTTGGAGCTCATGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: RASHGHCGCYRC*SSGSGWSSWKR
Trigger: CCTCTTCCATGAGCTCCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCAGATGGCGGGAGCATaGGGGTCCTCACATCGCTCC +
Preference number: 3 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIQMAGA*GSSHRS
Trigger: GGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp TGCGAGGCCAAGAATGAGCTAGAACGTGTGCCGCGGTaGGGCTGCCACCACCAGGACTCTTCTGCAGGATGC +
Preference number: 3 (lower is better)
Translates to: CEAKNELERVPR*GCHHQDSSAGC
Trigger: GCATCCTGCAGAAGAGTCCTGGTGGTGGCAGCCTCACCGCGGCACACGTTCTAGCTCATTCTTGGCCTCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp GCCCCATACATTTCCCAGTCTCCCTGGCTGTTGCATTaGGACCCTGTGACTGGGCCCTGCCCACTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: APYISQSPWLLH*DPVTGPCPLES
Trigger: GCTTTCCAGTGGGCAGGGCCCAGTCACAGGGTCCCAATGCAACAGCCAGGGAGACTGGGAAATGTATGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp GGTCTGCAGGCACGCTCTTCAGCCGCTCTAGCTCTTTaGTGTGCTTGCGGACCAAGCCTGCCTTCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: GLQARSSAALAL*CACGPSLPSAA
Trigger: AGCTGCAGAAGGCAGGCTTGGTCCGCAAGCACACCAAAGAGCTAGAGCGGCTGAAGAGCGTGCCTGCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCAGTCGGGTTAAAAGTCTaGACACGTCTGGGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: WVQMAGALGSSHRSLEASVGLKV*TRLGSQ
Trigger: TTGGGACCCCAGACGTGTCAAGACTTTTAACCCGAC...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCTGATGGTTTGGAGGTaGCAGCTGGGTCCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGLMVWR*QLGPSG
Trigger: CCCCGAGGGACCCAGCTGCAACCTCCAAACCATCAG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp ACACCTTTGATTCAAGCCTGGCGCAGCGGGACTGGCTaGGCTCACCTGAGTCTTAAAGGGGCCGCCCACAGA +
Preference number: 3 (lower is better)
Translates to: TPLIQAWRSGTG*AHLSLKGAAHR
Trigger: TCTGTGGGCGGCCCCTTTAAGACTCAGGTGAGCTCAGCCAGTCCCGCTGCGCCAGGCTTGAATCAAAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 72 bp GGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTaGGAAGGTGAGACTCCCCAGCTTGGCAAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: GGRVSLTGQVFR*EGETPQLGKRV
Trigger: CACTCTCTTGCCAAGCTGGGGAGTCTCACCTTCTCAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 72 bp ACCTGCCTTCCCCCATGTACGCAACCTACTCCATCCTaGACAGGTGAGGCTAGTGCGGGGCTGGCAAAGCTT +
Preference number: 3 (lower is better)
Translates to: TCLPPCTQPTPS*TGEASAGLAKL
Trigger: AAGCTTTGCCAGCCCCGCACTAGCCTCACCTGTGCAGGATGGAGTAGGTTGCGTACATGGGGGAAGGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CAA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACGAGGCTGAGGCAGGATaGCTGGAGCCCAGGAGATCA +
Preference number: 3 (lower is better)
Translates to: PLEPLPNILPRGGSPGINEAEAG*LEPRRS
Trigger: TGATCTCCTGGGCTCCAGCAATCCTGCCTCAGCCTC...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCCTCATAAAGCCCGCGTaGGGGCGCGTGATGCTGCGC +
Preference number: 3 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSLIKPA*GRVMLR
Trigger: GCGCAGCATCACGCGCCCCAACGCGGGCTTTATGAG...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGACGGGGGAGGTTCGGTaGGGCCAGAGGCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: SCVSAADTQQCRWALPLETGEVR*GQRLAS
Trigger: AGAAGCCAGCCTCTGGCCCAACCGAACCTCCCCCGT...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTTTGATCGAGCTGGGTaGGAAGCTGCCCCCACCTCC +
Preference number: 3 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCFDRAG*EAAPTS
Trigger: GGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAAA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp TCATCCACAGGCTGCTGGAGGCTGCTGTCTGTCTGCTaGCGCCACAGCTTGTTGTGCCGCTGTTTGCTTGCA +
Preference number: 3 (lower is better)
Translates to: SSTGCWRLLSVC*RHSLLCRCLLA
Trigger: TGCAAGCAAACAGCGGCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAGCCTCCAGCAGCCTGTGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp CCCTTCCCTAGATGGGCCCTAGTGGACCTAAGCATCTaGGCTCTCAGCAGGACGATGTGTCTCAGAACCACC +
Preference number: 3 (lower is better)
Translates to: PFPRWALVDLSI*ALSRTMCLRTT
Trigger: GGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCATCTAGGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp GGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATaGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: GEAAEISFPFPR*ALVDLSIWALS
Trigger: GCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp ATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTaGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTG +
Preference number: 3 (lower is better)
Translates to: IHSKWCPGSQRR*TGQPHWTGLPL
Trigger: CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp CCTGGGGCTCATGCAAGAAGGAAGATTCACTCAAAGTaGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCAG +
Preference number: 3 (lower is better)
Translates to: PGAHARRKIHSK*CPGSQRRWTGQ
Trigger: CTGACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTCTTGCATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp GAAGGAAGATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCAGCTTGCTGACACCTTaGATTCAAGCCTGGCGCAGC +
Preference number: 3 (lower is better)
Translates to: EGRFTQSGVLGVSDGGRVSLLTP*IQAWRS
Trigger: GCTGCGCCAGGCTTGAATCAAAGGTGTCAGCAAGCT...GACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACGCTGAGATCACACCATaGCACTCCAGTCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: PLEPLPNILPRGGSPGINAEITP*HSSLGN
Trigger: GTTGCCCAGACTGGAGTGCAATGGTGTGATCTCAGC...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCGACTCACGCCCATTTaGCAATGCACCAGGCACTTG +
Preference number: 3 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQRLTPI*QCTRHL
Trigger: CAAGTGCCTGGTGCATTGCAAAATGGGCGTGAGTCG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTAGCCGCTCTAGCTCTTaGGTGTGCTTGCGGACCAAG +
Preference number: 3 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPSRSSS*VCLRTK
Trigger: CTTGGTCCGCAAGCACACCAAAGAGCTAGAGCGGCT...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATGTGAGACTCCCCAGCTaGGCAAGAGAGTGTGAGCGC +
Preference number: 3 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDVRLPS*ARECER
Trigger: GCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCAC...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp ATGTTGCCATCCGAGAGTTTTCTGCGAGGCCAAGAATaGGCTAGAACGTGTGCCGCGGTGAGGCTGCCACCA +
Preference number: 3 (lower is better)
Translates to: MLPSESFLRGQE*ARTCAAVRLPP
Trigger: TGGTGGCAGCCTCACCGCGGCACACGTTCTAGCTCATTCTTGGCCTCGCAGAAAACTCTCGGATGGCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 72 bp TGTGCTTGCGGACCAAGCCTGCCTTCTGCAGCTGAATaGTGGACTCCTGGTGCTGCATCAGGTAGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: CACGPSLPSAAE*WTPGAASGSCW
Trigger: CCAACAGCTACCTGATGCAGCACCAGGAGTCCATCATTCAGCTGCAGAAGGCAGGCTTGGTCCGCAAGCACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp CTAGCAGACCAAGCTACGTTCTTTCATTGGCTCCTATaGGACACAGCATGGGCCAATGCCTGCCTGGCCTGC +
Preference number: 3 (lower is better)
Translates to: LADQATFFHWLL*DTAWANACLAC
Trigger: GCAGGCCAGGCAGGCATTGGCCCATGCTGTGTCCCATAGGAGCCAATGAAAGAACGTAGCTTGGTCTGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp CACGGCTGGCTAGCAGACCAAGCTACGTTCTTTCATTaGCTCCTATGGGACACAGCATGGGCCAATGCCTGC +
Preference number: 3 (lower is better)
Translates to: HGWLADQATFFH*LLWDTAWANAC
Trigger: GCAGGCATTGGCCCATGCTGTGTCCCATAGGAGCCAATGAAAGAACGTAGCTTGGTCTGCTAGCCAGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp CCAGTCTCCCTGGCTGTTGCATTGGGACCCTGTGACTaGGCCCTGCCCACTGGAAAGCAAGTAGAAATGATG +
Preference number: 3 (lower is better)
Translates to: PVSLAVALGPCD*ALPTGKQVEMM
Trigger: CATCATTTCTACTTGCTTTCCAGTGGGCAGGGCCCAGTCACAGGGTCCCAATGCAACAGCCAGGGAGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp CCAAATACATGTGCCCCATACATTTCCCAGTCTCCCTaGCTGTTGCATTGGGACCCTGTGACTGGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: PNTCAPYISQSP*LLHWDPVTGPC
Trigger: GCAGGGCCCAGTCACAGGGTCCCAATGCAACAGCCAGGGAGACTGGGAAATGTATGGGGCACATGTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCGAGTTGAGCAGGTTTaGATCGAGCTGGGTTGGAAG +
Preference number: 3 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGRVEQV*IELGWK
Trigger: CTTCCAACCCAGCTCGATCAAAACCTGCTCAACTCG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp GGCCTGGACAGACACAGGCTTAAATATGTGCATCCTTCCTGCTGTGCTCACGCTAGGCGCACTGCCAGCTaGATTCTGTCTTCGCAACGC +
Preference number: 3 (lower is better)
Translates to: GLDRHRLKYVHPSCCAHARRTAS*ILSSQR
Trigger: GCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCCT...AGCGTGAGCACAGCAGGAAGGATGCACATATTTAAGCCTGTGTCTGTCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR GCA 72 bp GTCAAACACGTAACAACACAACCAGGACAGGGCGCCTaGACCACCATTCGGGCACAGAGTCAGCTCAACAAC +
Preference number: 3 (lower is better)
Translates to: VKHVTTQPGQGA*TTIRAQSQLNN
Trigger: GTTGTTGAGCTGACTCTGTGCCCGAATGGTGGTGCAGGCGCCCTGTCCTGGTTGTGTTGTTACGTGTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp GCTGAGGGTCTGTTCTGTTCAAGCTCAGCTCCACACTaGTGCAAACTCTGGACTTCTCCAGGGGAAAAGGGC +
Preference number: 3 (lower is better)
Translates to: AEGLFCSSSAPH*CKLWTSPGEKG
Trigger: GCCCTTTTCCCCTGGAGAAGTCCAGAGTTTGCAGCAGTGTGGAGCTGAGCTTGAACAGAACAGACCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp CTCCCCAGCAAAACCACCTCCACTGTAGATGTGATCTaGGATCGTGCCCAACCGCGAGACAGTTACTCTGAG +
Preference number: 3 (lower is better)
Translates to: LPSKTTSTVDVI*DRAQPRDSYSE
Trigger: CTCAGAGTAACTGTCTCGCGGTTGGGCACGATCCCAGATCACATCTACAGTGGAGGTGGTTTTGCTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp TCATGCAAGAAGGAAGATTCACTCAAAGTGGTGTCCTaGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTG +
Preference number: 3 (lower is better)
Translates to: SCKKEDSLKVVS*ESATVDGSASL
Trigger: CAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTCTTGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp GCTGTGCTCACGCTGAACCCACCATCTCCATCAAGGTaGATTTTCGTGTCGCTCCACAGTCGGAGAACCATC +
Preference number: 3 (lower is better)
Translates to: AVLTLNPPSPSR*IFVSLHSRRTI
Trigger: GATGGTTCTCCGACTGTGGAGCGACACGAAAATCCACCTTGATGGAGATGGTGGGTTCAGCGTGAGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGGTGGGCCCTTCCCCTaGAGATTTAAACTTCAGCAT +
Preference number: 3 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGGGPFP*RFKLQH
Trigger: ATGCTGAAGTTTAAATCTCAAGGGGAAGGGCCCACC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CAA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGGTTTTGACATCTAGCTaGCTGACACCTTTGATTCAA +
Preference number: 3 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLVLTSS*LTPLIQ
Trigger: TTGAATCAAAGGTGTCAGCAAGCTAGATGTCAAAAC...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp GAAGGAAGATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCGCCACATGCCATAGTTaGCTGACCCCTGAATTCAAC +
Preference number: 3 (lower is better)
Translates to: EGRFTQSGVLGVSDGGRVATCHS*LTPEFN
Trigger: GTTGAATTCAGGGGTCAGCAAACTATGGCATGTGGC...GACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp GAAGGAAGATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCAGAAGCCTCAGGTCCTaGGCTGGCTTCATATCTTTC +
Preference number: 3 (lower is better)
Translates to: EGRFTQSGVLGVSDGGRVRSLRS*AGFISF
Trigger: GAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTCT...GACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp GATCTGGGATCGTGCCCAACCGCGAGACAGTTACTCTaGGGAGGAAATCAGGGCAAAAGCAGCCCATTACAG +
Preference number: 3 (lower is better)
Translates to: DLGSCPTARQLL*GGNQGKSSPLQ
Trigger: CTGTAATGGGCTGCTTTTGCCCTGATTTCCTCCTCAGAGTAACTGTCTCGCGGTTGGGCACGATCCCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 72 bp CTGTTGTTGTTTAGGTTCTCCGAGTTGAGCAGGTTTTaGTCGAGCTGGGTTGGAAGCTGCCCCCACCTCCCT +
Preference number: 3 (lower is better)
Translates to: LLLFRFSELSRF*SSWVGSCPHLP
Trigger: AGGGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAAAACCTGCTCAACTCGGAGAACCTAAACAACAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 72 bp GGAATTGTGGAAGAGCTTCAGCCAACTGTGTTCACCTaGCTTCCCCCATGTACGCAACCTACTCCATCCTGC +
Preference number: 3 (lower is better)
Translates to: GIVEELQPTVFT*LPPCTQPTPSC
Trigger: GCAGGATGGAGTAGGTTGCGTACATGGGGGAAGGCAGGTGAACACAGTTGGCTGAAGCTCTTCCACAATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp CAGGCTATTAAGCATCAAGTCCAGAATGCTTCACTCTaGTCTGTGGACGGGACCAGCGCTCTCGTCTGGATG +
Preference number: 3 (lower is better)
Translates to: QAIKHQVQNASL*SVDGTSALVWM
Trigger: CATCCAGACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATGCTTAATAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp GAGCTATTCAACAGCCCAGAGGTTGGCTGGGGTCCCTaGATGGAGAGCAAGGAAGCAGGGAATGTAAAGAGA +
Preference number: 3 (lower is better)
Translates to: ELFNSPEVGWGP*MESKEAGNVKR
Trigger: TCTCTTTACATTCCCTGCTTCCTTGCTCTCCATGCAGGGACCCCAGCCAACCTCTGGGCTGTTGAATAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 72 bp AAGGCCGACAGGAAGGACAGTGGAGGACTGGTGATCTaGTTATCGGGACTCCTGTCTGAGACAGTGACTGAA +
Preference number: 3 (lower is better)
Translates to: KADRKDSGGLVI*LSGLLSETVTE
Trigger: TTCAGTCACTGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCTGTCGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 72 bp GACCACATGGCCTGGACAGACACAGGCTTAAATATGTaGATCCTTCCTGCTGTGCTCACGCTGAACCCACCA +
Preference number: 3 (lower is better)
Translates to: DHMAWTDTGLNM*ILPAVLTLNPP
Trigger: TGGTGGGTTCAGCGTGAGCACAGCAGGAAGGATGCACATATTTAAGCCTGTGTCTGTCCAGGCCATGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR CCA 72 bp GTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTaGGAGCGGAGTTTTGTGTCTCCTGGCCGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: VLPKTWFFLKTR*ERSFVSPGRRL
Trigger: GAGCCGCCGGCCAGGAGACACAAAACTCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp TATCTTCTCATGCAGCAAGGCCGACAGGAAGGACAGTaGAGGACTGGTGATCTGCTTATCGGGACTCCTGTC +
Preference number: 3 (lower is better)
Translates to: YLLMQQGRQEGQ*RTGDLLIGTPV
Trigger: GACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCTGTCGGCCTTGCTGCATGAGAAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp TCTCCTCCACCTGCAGCAAGGAGCCGCTCCGACCTTTaGGACTCCCAAACTCTAGTTTCTTCTTCACATCCT +
Preference number: 3 (lower is better)
Translates to: SPPPAARSRSDL*DSQTLVSSSHP
Trigger: AGGATGTGAAGAAGAAACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCTCCTTGCTGCAGGTGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTTCTTGTGCTGCATGTaGGTTAGTTTCTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIFLCCM*VSFFSS
Trigger: GGAGGAGAAGAAACTAACCAACATGCAGCACAAGAA...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CAA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACAAAACATGGTTCTTCTaGAAGACACGGTGGGAGCGG +
Preference number: 3 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHKTWFF*KTRWER
Trigger: CCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTTT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CAA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGTCGGGTTAAAAGTCTaGACACGTCTGGGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: LAPTISHQWKATPSPDASVGLKV*TRLGSQ
Trigger: TTGGGACCCCAGACGTGTCAAGACTTTTAACCCGAC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCCAATGCACCAGGCACTaGGAATGGTTCCTCTTCGCT +
Preference number: 3 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSQCTRH*EWFLFA
Trigger: AGCGAAGAGGAACCATTCCAAGTGCCTGGTGCATTG...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCTCCTCTTGCTGTTGTaGTTTAGGTTCTCCGAGTTG +
Preference number: 3 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQLLLLL*FRFSEL
Trigger: CAACTCGGAGAACCTAAACAACAACAGCAAGAGGAG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACACTTTGGCAGGACTTTaGGGGTCTCTCTGGAAGGTT +
Preference number: 3 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHTLAGL*GSLWKV
Trigger: AACCTTCCAGAGAGACCCCAAAAGTCCTGCCAAAGT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp GGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATaGGCAGCCCTGTGTGGCAAATCAAACCAGGGGTCA +
Preference number: 3 (lower is better)
Translates to: GFTFTQFLPTGP*AALCGKSNQGS
Trigger: TGACCCCTGGTTTGATTTGCCACACAGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp GAGGGTCTGTTCTGTTCAAGCTCAGCTCCACACTGCTaGAAACTCTGGACTTCTCCAGGGGAAAAGGGCTTT +
Preference number: 3 (lower is better)
Translates to: EGLFCSSSAPHC*KLWTSPGEKGF
Trigger: AAAGCCCTTTTCCCCTGGAGAAGTCCAGAGTTTGCAGCAGTGTGGAGCTGAGCTTGAACAGAACAGACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp CCACCATTCGGGCACAGAGTCAGCTCAACAACAGCGTaGGACTACTCATCTGATGACTTTACTCAGCAGTGC +
Preference number: 3 (lower is better)
Translates to: PPFGHRVSSTTA*DYSSDDFTQQC
Trigger: GCACTGCTGAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCCCGAATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp AACCCACTGGCAGCTTCTGGAAAACCAAACAACTCATaGTGTGGAGCTCCTGATTGGGGAAGGGACAGGGAT +
Preference number: 3 (lower is better)
Translates to: NPLAASGKPNNS*CGAPDWGRDRD
Trigger: ATCCCTGTCCCTTCCCCAATCAGGAGCTCCACACCATGAGTTGTTTGGTTTTCCAGAAGCTGCCAGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp AGAATTCCCAGGGAATCTCAGAAACATACAGATTGCTaGGGCCCATCCCACCCCATTCATGGCTGGAACCCA +
Preference number: 3 (lower is better)
Translates to: RIPRESQKHTDC*GPSHPIHGWNP
Trigger: TGGGTTCCAGCCATGAATGGGGTGGGATGGGCCCCAGCAATCTGTATGTTTCTGAGATTCCCTGGGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGTTCTTGTGCTGCATGTaGGTTAGTTTCTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: KVRLPSLARECERFSGEEFLCCM*VSFFSS
Trigger: GGAGGAGAAGAAACTAACCAACATGCAGCACAAGAA...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGAGGGCAAGATGGAATaGTGGAAGAGCTTCAGCCAA +
Preference number: 3 (lower is better)
Translates to: RKDSGGLVICLSGLLSETEGKME*WKSFSQ
Trigger: TTGGCTGAAGCTCTTCCACAATTCCATCTTGCCCTC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCTCTCTCGAAATGTTTaGACATCTAGCTTGCTGACA +
Preference number: 3 (lower is better)
Translates to: HQVQNASLCSVDGTSALVLSRNV*TSSLLT
Trigger: TGTCAGCAAGCTAGATGTCAAAACATTTCGAGAGAG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CAA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGAATTCAGCTGGTCCTaGAAGGCTTTCTGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: RKDSGGLVICLSGLLSETEFSWS*KAFWFH
Trigger: GTGAAACCAGAAAGCCTTCAAGGACCAGCTGAATTC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCTTTCTAGAATAGCTTaGGGGAACACAGTTCTGGCC +
Preference number: 3 (lower is better)
Translates to: SCVSAADTQQCRWALPLELSRIA*GNTVLA
Trigger: GGCCAGAACTGTGTTCCCCAAAGCTATTCTAGAAAG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 72 bp GCTCTGTGGACGGGACCAGCGCTCTCGTCTGGATGTTaGTATGCTAGCTGTGCTTCCAAAAATGAATGGGTA +
Preference number: 3 (lower is better)
Translates to: ALWTGPALSSGC*YASCASKNEWV
Trigger: TACCCATTCATTTTTGGAAGCACAGCTAGCATATCAACATCCAGACGAGAGCGCTGGTCCCGTCCACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 72 bp TACCATCCGAGAGCAGCCCCGGTTCTCCTCTTCCCGTaGCCACTATCCCCCTTATACTTAGCAAGACTTAAA +
Preference number: 3 (lower is better)
Translates to: YHPRAAPVLLFP*PLSPLYLARLK
Trigger: TTTAAGTCTTGCTAAGTATAAGGGGGATAGTGGTCACGGGAAGAGGAGAACCGGGGCTGCTCTCGGATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 72 bp TCTCAAGGTGTTGGGATAACAGGCGTCAAGCCACCGTaGCCAAATTTGTCTTTTAGAGTCGGATGCTGGAGC +
Preference number: 3 (lower is better)
Translates to: SQGVGITGVKPP*PNLSFRVGCWS
Trigger: GCTCCAGCATCCGACTCTAAAAGACAAATTTGGGCACGGTGGCTTGACGCCTGTTATCCCAACACCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 72 bp CTGGACAGACACAGGCTTAAATATGTGCATCCTTCCTaGTGTGCTCACGCTGAACCCACCATCTCCATCAAG +
Preference number: 3 (lower is better)
Translates to: LDRHRLKYVHPS*CAHAEPTISIK
Trigger: CTTGATGGAGATGGTGGGTTCAGCGTGAGCACAGCAGGAAGGATGCACATATTTAAGCCTGTGTCTGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR CCA 72 bp CCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGTGTaGCAAATCAAACCAGGGGTCAGCAACTTTTTCTAC +
Preference number: 3 (lower is better)
Translates to: PVSSYRAMSSPV*QIKPGVSNFFY
Trigger: GTAGAAAAAGTTGCTGACCCCTGGTTTGATTTGCCACACAGGGCTGCTCATGGCCCTGTAGGAAGAAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp GATAAACATAACCTGGTTTTAGGAGGCAAGGATGCGTaGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: DKHNLVLGGKDA*VGGVSWVELSF
Trigger: AAAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAAACCAGGTTATGTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAAAATATGAACTAGCCTaGTTCCTGCAGATCCCTCCT +
Preference number: 3 (lower is better)
Translates to: LAPTISHQWKATPSPDASKYELA*FLQIPP
Trigger: AGGAGGGATCTGCAGGAACAAGGCTAGTTCATATTT...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGTTTGAGGCTATGCTTTaGTTGGCTGAGGGAAAGGGG +
Preference number: 3 (lower is better)
Translates to: FLLVREENPPKVQILSWWFEAML*LAEGKG
Trigger: CCCCTTTCCCTCAGCCAACAAAAGCATAGCCTCAAA...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCTGTGCCACTTATGTTaGGAATTTTCCCCATCAGCT +
Preference number: 3 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDLCHLC*EFSPSA
Trigger: AGCTGATGGGGAAAATTCCAAACATAAGTGGCACAG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 72 bp ATCCAAATCCACAGTGAAAGTGAGGGAGGGATCATATaGAAATATCCGCCCAGCCTGACGCAGCAAAAGGCG +
Preference number: 3 (lower is better)
Translates to: IQIHSESEGGII*KYPPSLTQQKA
Trigger: CGCCTTTTGCTGCGTCAGGCTGGGCGGATATTTTCATATGATCCCTCCCTCACTTTCACTGTGGATTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 72 bp AGGCACTGGAATTTAGGGGTCACGCCCAGGTACTTGTaGCAGTTAGTGCTCACCAAATACATGTGCCCCATA +
Preference number: 3 (lower is better)
Translates to: RHWNLGVTPRYL*QLVLTKYMCPI
Trigger: TATGGGGCACATGTATTTGGTGAGCACTAACTGTCACAAGTACCTGGGCGTGACCCCTAAATTCCAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 72 bp GGTGGGGGTGTAGCAGATGGTCTTCAGAAAGTCTTTTaGGAAACTACTGGTGTGGTCCAGGCGGTAGAAGAA +
Preference number: 3 (lower is better)
Translates to: GGGVADGLQKVF*ETTGVVQAVEE
Trigger: TTCTTCTACCGCCTGGACCACACCAGTAGTTTCTCAAAAGACTTTCTGAAGACCATCTGCTACACCCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR GCA 72 bp TCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTaGGCCTATGTGTGCACGTTCTTCCTAAAACATGGT +
Preference number: 3 (lower is better)
Translates to: SSAGCEGNSLDV*AYVCTFFLKHG
Trigger: ACCATGTTTTAGGAAGAACGTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp CACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTaGTTAGTTTCTTCTCCTCCTCTCTATGGCAAGAGT +
Preference number: 3 (lower is better)
Translates to: HTTDSSPSCAAC*LVSSPPLYGKS
Trigger: ACTCTTGCCATAGAGAGGAGGAGAAGAAACTAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR-3UTR CAA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACTCTCTCGAAATGTTTaGACATCTAGCTTGCTGACA +
Preference number: 3 (lower is better)
Translates to: LAPTISHQWKATPSPDASLSRNV*TSSLLT
Trigger: TGTCAGCAAGCTAGATGTCAAAACATTTCGAGAGAG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACGAACCCAAAGAGAATTaGTTAGCTATCTTCAACCTT +
Preference number: 3 (lower is better)
Translates to: PLEPLPNILPRGGSPGINEPKEN*LAIFNL
Trigger: AAGGTTGAAGATAGCTAACAAATTCTCTTTGGGTTC...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCGGCTTCATATCTTTCTaGGGTGACGATTCTTCCTTT +
Preference number: 3 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSGFISF*GDDSSF
Trigger: AAAGGAAGAATCGTCACCCAAGAAAGATATGAAGCC...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp GAGCTCTCCTTTAGAAAGGGCTTCTTTACCATAAAGTaGATCCCCCTAAGTTCCAAGCCGTCCTCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: ELSFRKGFFTIK*IPLSSKPSSVL
Trigger: CAGCACAGAGGACGGCTTGGAACTTAGGGGGATTCACTTTATGGTAAAGAAGCCCTTTCTAAAGGAGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 72 bp GGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTaGACAGAAGCCTCAGGTCCTTGGCTGGCTTCATAT +
Preference number: 3 (lower is better)
Translates to: GSCWLSASQIHY*TEASGPWLASY
Trigger: ATATGAAGCCAGCCAAGGACCTGAGGCTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp TGTGTGCGCCTATGTGTGCACGTTCTTCCTAAAACATaGTTCTTCTTGAAGACACGGTGGGAGCGGAGTTTT +
Preference number: 3 (lower is better)
Translates to: CVRLCVHVLPKT*FFLKTRWERSF
Trigger: AAAACTCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAGGCGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CCA 72 bp ACAACCTTCATTTGGTTTGCAATGTCTGCAGGAATCTaGGTAGTGGGACCAAGACAAGTGAGCCTGCTCTGT +
Preference number: 3 (lower is better)
Translates to: TTFIWFAMSAGI*VVGPRQVSLLC
Trigger: ACAGAGCAGGCTCACTTGTCTTGGTCCCACTACCCAGATTCCTGCAGACATTGCAAACCAAATGAAGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp ACATACAGATTGCTGGGGCCCATCCCACCCCATTCATaGCTGGAACCCAAAGAGAATTTGTTAGCTATCTTC +
Preference number: 3 (lower is better)
Translates to: TYRLLGPIPPHS*LEPKENLLAIF
Trigger: GAAGATAGCTAACAAATTCTCTTTGGGTTCCAGCCATGAATGGGGTGGGATGGGCCCCAGCAATCTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp CTGAAACCACAAGGGAGATCAAGATGCATCTTTGTCTaGCTTCTTTCTACTTCTGGGGTGGGAGAGACAGCT +
Preference number: 3 (lower is better)
Translates to: LKPQGRSRCIFV*LLSTSGVGETA
Trigger: AGCTGTCTCTCCCACCCCAGAAGTAGAAAGAAGCCAGACAAAGATGCATCTTGATCTCCCTTGTGGTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGTGTGCCGCTGTTTGCTaGCATCCAAGATGCCTTCAT +
Preference number: 3 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKCAAVC*HPRCLH
Trigger: ATGAAGGCATCTTGGATGCAAGCAAACAGCGGCACA...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGAATTCAGCTGGTCCTaGAAGGCTTTCTGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEEFSWS*KAFWFH
Trigger: GTGAAACCAGAAAGCCTTCAAGGACCAGCTGAATTC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp GGGTCATTCAACAACCTTCATTTGGTTTGCAATGTCTaGAGGAATCTGGGTAGTGGGACCAAGACAAGTGAG +
Preference number: 3 (lower is better)
Translates to: GSFNNLHLVCNV*RNLGSGTKTSE
Trigger: CTCACTTGTCTTGGTCCCACTACCCAGATTCCTGCAGACATTGCAAACCAAATGAAGGTTGTTGAATGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACGTTTTGACATCTAGCTaGCTGACACCTTTGATTCAA +
Preference number: 3 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNVLTSS*LTPLIQ
Trigger: TTGAATCAAAGGTGTCAGCAAGCTAGATGTCAAAAC...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp TTCCACTGCAGAGCAGATGATAACAAAACAAGTGGCTaGGGACAGGGGTCATTCAACAACCTTCATTTGGTT +
Preference number: 3 (lower is better)
Translates to: FHCRADDNKTSG*GQGSFNNLHLV
Trigger: AACCAAATGAAGGTTGTTGAATGACCCCTGTCCCCAGCCACTTGTTTTGTTATCATCTGCTCTGCAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CCA 72 bp ATCATCGATATCTTAACGCAATTCACGGGAACCCACTaGCAGCTTCTGGAAAACCAAACAACTCATGGTGTG +
Preference number: 3 (lower is better)
Translates to: IIDILTQFTGTH*QLLENQTTHGV
Trigger: CACACCATGAGTTGTTTGGTTTTCCAGAAGCTGCCAGTGGGTTCCCGTGAATTGCGTTAAGATATCGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR-3UTR CAA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGAATGAATGGGTAAGTTaGCCAGAAGCCAAAGACCAA +
Preference number: 3 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWENEWVS*PEAKDQ
Trigger: TTGGTCTTTGGCTTCTGGCAAACTTACCCATTCATT...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp TTATTAGGTAGTGTGCCAGGCAGAAGGGGATTTGCATaGATTATCAGTGAATTCACCAATGACCCCATGAAG +
Preference number: 3 (lower is better)
Translates to: LLGSVPGRRGFA*IISEFTNDPMK
Trigger: CTTCATGGGGTCATTGGTGAATTCACTGATAATGCATGCAAATCCCCTTCTGCCTGGCACACTACCTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 72 bp CTCCTCTCTATGGCAAGAGTAGGGGAAAAGTTAGGATaGCTTCACTCGTTTAAGGGAAATCAAGATGTAAGG +
Preference number: 3 (lower is better)
Translates to: LLSMARVGEKLG*LHSFKGNQDVR
Trigger: CCTTACATCTTGATTTCCCTTAAACGAGTGAAGTCATCCTAACTTTTCCCCTACTCTTGCCATAGAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR TCA 72 bp CAGGTGACACAGTGTGTCTGGATGCACATGATCACTTaGCTCGGTTTCTATACTCAAATATACAGATGCAGA +
Preference number: 3 (lower is better)
Translates to: QVTQCVWMHMIT*LGFYTQIYRCR
Trigger: TCTGCATCTGTATATTTGAGTATAGAAACCGAGTCAAGTGATCATGTGCATCCAGACACACTGTGTCACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR GCA 72 bp TACAAAGCAAGGGCCAAGCTATGGCATATGTTACAGTaGAAACTTCCTTTTCACAGACAGCATGAATTCGTC +
Preference number: 3 (lower is better)
Translates to: YKARAKLWHMLQ*KLPFHRQHEFV
Trigger: GACGAATTCATGCTGTCTGTGAAAAGGAAGTTTGCACTGTAACATATGCCATAGCTTGGCCCTTGCTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR GCA 72 bp TCTTGGGTGACGATTCTTCCTTTATTACCACTTCTGTaGTGGGAGGGTTCTTATCACAGTGAGAATTCTTCA +
Preference number: 3 (lower is better)
Translates to: SWVTILPLLPLL*WEGSYHSENSS
Trigger: TGAAGAATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACCCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CCA 72 bp TGGGTGACGATTCTTCCTTTATTACCACTTCTGTGCTaGGAGGGTTCTTATCACAGTGAGAATTCTTCAAAA +
Preference number: 3 (lower is better)
Translates to: WVTILPLLPLLC*EGSYHSENSSK
Trigger: TTTTGAAGAATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR-3UTR CAA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTTCTTCAGAAAGTCTTTaGAGAAACTACTGGTGTGGT +
Preference number: 3 (lower is better)
Translates to: LEKRFQTEHYSLEQALVISSESL*RNYWCG
Trigger: ACCACACCAGTAGTTTCTCAAAAGACTTTCTGAAGA...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR TCA 72 bp GATGATGACGATGTATCAGACTGTTTTGGCAAGGGCTaGGGAAGCAGTTTCCTTTTATATAAACTCAGTCAT +
Preference number: 3 (lower is better)
Translates to: DDDDVSDCFGKG*GSSFLLYKLSH
Trigger: ATGACTGAGTTTATATAAAAGGAAACTGCTTCCTCAGCCCTTGCCAAAACAGTCTGATACATCGTCATCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 72 bp TGTAGAAAAGTTCAGTCTAACTTTTGGCATGCCACATaGATTAATGTGAGGCAGAAGATAAGATTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: CRKVQSNFWHAT*INVRQKIRFSC
Trigger: ACAGCTGAATCTTATCTTCTGCCTCACATTAATTCATGTGGCATGCCAAAAGTTAGACTGAACTTTTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR TCA 72 bp TCCAAAAAGCATGTGTGCAATGTAATTAGCAAAGCGTaGGCCTACTCAGTTGCATCATATTCTTATTTTGAT +
Preference number: 3 (lower is better)
Translates to: SKKHVCNVISKA*AYSVASYSYFD
Trigger: ATCAAAATAAGAATATGATGCAACTGAGTAGGCTCACGCTTTGCTAATTACATTGCACACATGCTTTTTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TACCGGACCCGGTCCGCCCAGGCGCTCTCCAGGCGCACTGCCAGCTTGATTCTGTTCTCCTCGGTGTCCTaGCGCCCGCTGCTGTACACC +
Preference number: 4 (lower is better)
Translates to: YRTRSAQALSRRTASLILFSSVS*RPLLYT
Trigger: GGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAA...CAGAATCAAGCTGGCAGTGCGCCTGGAGAGCGCCTGGGCGGACCGGGTCCGGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR CCA 90 bp CCCGGGGAAGTAGTTGTGCCTCCGGGCCACTTCGCAGGCCTTGTGAAGCACCTGCCAACTCGCTGTTGCTaGCCGAGGAGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PGEVVVPPGHFAGLVKHLPTRCC*PRRRRR
Trigger: GCGCCGCCTCCTCCTCGGCCAGCAACAGCGAGTTGG...CAGGTGCTTCACAAGGCCTGCGAAGTGGCCCGGAGGCACAACTACTTCCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR CAA 72 bp TGGAGCCTGCTGGTGGTAGGAACGGGGGAGGTTCGGTaGGGCCAGAGGCTGGCTTCTCCGGAACACGGGACC +
Preference number: 4 (lower is better)
Translates to: WSLLVVGTGEVR*GQRLASPEHGT
Trigger: GGTCCCGTGTTCCGGAGAAGCCAGCCTCTGGCCCAACCGAACCTCCCCCGTTCCTACCACCAGCAGGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp CACCACCATGTACCGGACCCGGTCCGCCCAGGCGCTCTCCAGGCGCACTGCCAGAGCTCTGCTCGGAGCTaGTGCAGCTCTCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: HHHVPDPVRPGALQAHCQSSARS*CSSHSR
Trigger: CCTACTATGAGAGCTGCATCAGCTCCGAGCAGAGCT...CTGGCAGTGCGCCTGGAGAGCGCCTGGGCGGACCGGGTCCGGTACATGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp TACCGGACCCGGTCCGCCCAGGCGCTCTCCAGGCGCACTGCCAGCTTGATTCTGTGTCCTGGCGCCCGCTaGTGTACACCACCACCATGT +
Preference number: 4 (lower is better)
Translates to: YRTRSAQALSRRTASLILCPGAR*CTPPPC
Trigger: ACATGGTGGTGGTGTACAGCAGCGGGCGCCAGGACA...CAGAATCAAGCTGGCAGTGCGCCTGGAGAGCGCCTGGGCGGACCGGGTCCGGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
3UTR CAA 72 bp GGTAGGAAGGCTGGCTGGGTGCAGATGGCGGGAGCATaGGGGTCCTCACATCGCTCCCTGGAGGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GRKAGWVQMAGA*GSSHRSLEASG
Trigger: TCCTGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCAGCCAGCCTTCCTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCAGCTGGGTTGGAAGCTaGCCCCACCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVSWVGS*PHLPAP
Trigger: GGGAGCAGGGAGGTGGGGGCAGCTTCCAACCCAGCT...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACAGGCGGCGCTGGGCGTaGGCGAGCGCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINRRRWA*ASAAGS
Trigger: TGACCCTGCAGCGCTCGCCCACGCCCAGCGCCGCCT...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TGGGGTCTCTGGCAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGCTGGCTGAGCTCACCTaGGTCTTAAAGGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: WGLWQEVARSCRVIHRLLLAELT*VLKGPP
Trigger: GGGCGGCCCCTTTAAGACTCAGGTGAGCTCAGCCAG...CAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTGCCAGAGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGATGGCTGCGGCGCGGTaGGAGGGCGCCACAGACGTC +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQMAAAR*EGATDV
Trigger: GACGTCTGTGGCGCCCTCGCACCGCGCCGCAGCCAT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCGGCCCTAAGCCGGGCTaGGCGGCATCATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVGPKPG*AASSKK
Trigger: CTTCTTGGATGATGCCGCCCAGCCCGGCTTAGGGCC...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACGGCGTGGGCGAGCGCTaGAGGGTCACCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHGVGER*RVTRAM
Trigger: CATGGCCCTGGTGACCCTGCAGCGCTCGCCCACGCC...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCAGGGCCACTGGTGTCTaGCCTCCTGGAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIRATGV*PPGACW
Trigger: CCAGCAGGCTCCAGGAGGGCAGACACCAGTGGCCCT...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGTGCTGGCCTCCAGCCTaGTGGCAGGGCCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQCWPPA*WQGHPW
Trigger: CCAGGGATGGCCCTGCCAGCAGGCTGGAGGCCAGCA...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGGGTCACCAGGGCCATaGCTGCGGCGCGGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETGSPGP*LRRGAR
Trigger: CCTCGCACCGCGCCGCAGCCATGGCCCTGGTGACCC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TGTGCTCACGCTGAACCCACCATCTCCATCAAGGTGGATTTTCGTGTCGCTCCAAGGCGGCGCTGGGCGTaGGCGAGCGCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CAHAEPTISIKVDFRVAPRRRWA*ASAAGS
Trigger: TGACCCTGCAGCGCTCGCCCACGCCCAGCGCCGCCT...TGGAGCGACACGAAAATCCACCTTGATGGAGATGGTGGGTTCAGCGTGAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCCAACTCGCTGTTGCTaGCCGAGGAGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLPTRCC*PRRRRR
Trigger: GCGCCGCCTCCTCCTCGGCCAGCAACAGCGAGTTGG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGTGGCCTCCAGCCTGCTaGCAGGGCCATCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQWPPAC*QGHPWR
Trigger: CCTCCAGGGATGGCCCTGCCAGCAGGCTGGAGGCCA...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACAGGGGGCCCAGCTCGTaGAGCGCGGCTGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHRGPSS*SAAGSW
Trigger: CCAGGATCCAGCCGCGCTCCACGAGCTGGGCCCCCT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCTTTGGAGGTTGCAGCTaGGTCCCTCGGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVFGGCS*VPRGSL
Trigger: CAGGGAACCCCGAGGGACCCAGCTGCAACCTCCAAA...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCTGGCCGGCGGCTCCTaGTTCTCCCAGGCCACACGA +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQLAGGS*FSQATR
Trigger: TCGTGTGGCCTGGGAGAACCAGGAGCCGCCGGCCAG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CAA 72 bp GGGTCTGCAGGCACGCTCTTCAGCCGCTCTAGCTCTTaGGTGTGCTTGCGGACCAAGCCTGCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSAGTLFSRSSS*VCLRTKPAFCS
Trigger: GCTGCAGAAGGCAGGCTTGGTCCGCAAGCACACCAAAGAGCTAGAGCGGCTGAAGAGCGTGCCTGCAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTAGCGGGGGCGGCCTCTaGCTTCTCATCACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPSGGGL*LLITPG
Trigger: GCCGGGAGTGATGAGAAGTCAGAGGCCGCCCCCGCT...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGGGACAGGTCTTCCGTTaGGAAGGTGAGACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSGQVFR*EGETPQ
Trigger: CTGGGGAGTCTCACCTTCTCAACGGAAGACCTGTCC...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCCCAGGCCACACGACTaGCAGCTCCCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIPRPHD*QLPFLC
Trigger: GCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAGAACGTGTGCCGCGGTaGGGCTGCCACCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLERVPR*GCHHQD
Trigger: GTCCTGGTGGTGGCAGCCTCACCGCGGCACACGTTC...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGTGCATTGGGACCCTGTaGCTGGGCCCTGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQCIGTL*LGPAHW
Trigger: CCAGTGGGCAGGGCCCAGTCACAGGGTCCCAATGCA...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGCGCCACAGCTTGTTGTaGCGCTGTTTGCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLRHSLL*RCLLAS
Trigger: GGATGCAAGCAAACAGCGGCACAACAAGCTGTGGCG...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACAGCTGGGTTGGAAGCTaGCCCCACCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINSWVGS*PHLPAP
Trigger: GGGAGCAGGGAGGTGGGGGCAGCTTCCAACCCAGCT...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTAGGGCCACTGGTGTCTaGCCTCCTGGAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLRATGV*PPGACW
Trigger: CCAGCAGGCTCCAGGAGGGCAGACACCAGTGGCCCT...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GAGGCTGCTGTCTGTCTGCTGACGCCACAGCTTGTTGTGCCGCTGTTTGCTTGCGGGGAGGACGTGATGTaGGGTAGGAAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EAAVCLLTPQLVVPLFACGEDVM*GRKAGW
Trigger: CCAGCCAGCCTTCCTACCCCACATCACGTCCTCCCC...GCAAGCAAACAGCGGCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACGAACACGGGACCTGCTaGCCAAGTGGGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINEHGTC*PSGPQG
Trigger: CCCCTGTGGCCCACTTGGCCAGCAGGTCCCGTGTTC...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCGGGGGAGGTTCGGTTaGGCCAGAGGCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGRGRFG*ARGWLL
Trigger: GAGAAGCCAGCCTCTGGCCCAACCGAACCTCCCCCG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAGCGCGGCTGGATCCTaGCTCTCCTCGGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQSAAGS*LSSGML
Trigger: CAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGCT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAAGGGGGCCCAGCTCGTaGAGCGCGGCTGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETRGPSS*SAAGSW
Trigger: CCAGGATCCAGCCGCGCTCCACGAGCTGGGCCCCCT...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCATTCCCACGGACACTGTaGATGCTATCGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WVQMAGALGSSHRSLEASFPRTL*MLSLLE
Trigger: CTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAA...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGGAGTTTTGTGTCTCCTaGCCGGCGGCTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSEFCVS*PAAPGS
Trigger: AGAACCAGGAGCCGCCGGCCAGGAGACACAAAACTC...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGCGCCACCCCACGGCTaGCTAGCAGACCAAGCTACG +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVAPPHG*LADQAT
Trigger: CGTAGCTTGGTCTGCTAGCCAGCCGTGGGGTGGCGC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp AGCAAGATATTCTCCTCGGTGTCCTGGCGCCCGCTGCTGTACACCACCACCATGTGGCGTTCCACTCGTTaGTGCAGCTCTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: SKIFSSVSWRPLLYTTTMWRSTR*CSSARS
Trigger: GCTCCGAGCAGAGCTGCATCAACGAGTGGAACGCCA...CATGGTGGTGGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAATATCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR TCA 90 bp GAGGCTGCTGTCTGTCTGCTGACGCCACAGCTTGTTGTGCCGCTGTTTGCTTGCAGGCAGAAGGGGGTCTaGGAGTCGCCGGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: EAAVCLLTPQLVVPLFACRQKGV*ESPETA
Trigger: TGCTGTTTCCGGCGACTCTCAGACCCCCTTCTGCCT...GCAAGCAAACAGCGGCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGAACGTGTGCCGCGGTaGGGCTGCCACCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASERVPR*GCHHQD
Trigger: GTCCTGGTGGTGGCAGCCTCACCGCGGCACACGTTC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCGGGTCATCCACAGGCTaGTGGAGGCTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIGSSTG*WRLLSV
Trigger: GACAGACAGCAGCCTCCAGCAGCCTGTGGATGACCC...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCGGCCTGTGCACCTCTaGAGGTGGAGCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGRPVHL*RWSSFL
Trigger: GAGGAAGCTGCTCCACCTGCAGAGGTGCACAGGCCG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTTGTCTGGCCGGCCTGTaGACCTCTGCAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLCLAGL*TSAGGA
Trigger: TGCTCCACCTGCAGAGGTGCACAGGCCGGCCAGACA...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCTCCGTCTCCTCCACCTaGAGCAAGGAGCCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVSVSST*SKEPLR
Trigger: TCGGAGCGGCTCCTTGCTGCAGGTGGAGGAGACGGA...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GCAGACCACATGGCCTGGACAGACACAGGCTTAAATATGTGCATCCTTCCTGCTGGCGTGGGCGAGCGCTaGAGGGTCACCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: ADHMAWTDTGLNMCILPAGVGER*RVTRAM
Trigger: CATGGCCCTGGTGACCCTGCAGCGCTCGCCCACGCC...AGCAGGAAGGATGCACATATTTAAGCCTGTGTCTGTCCAGGCCATGTGGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCCTCCAACTCGCTGTTaGTGGCCGAGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCPPTRC*WPRRRR
Trigger: CCGCCTCCTCCTCGGCCAGCAACAGCGAGTTGGAGG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCCGGAACACGGGACCTaGTGGCCAAGTGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCPEHGT*WPSGPQ
Trigger: CTGTGGCCCACTTGGCCAGCAGGTCCCGTGTTCCGG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGATCCCTGGAGGGAGGTaGTGGGTCTGCAGGCACGCT +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGIPGGR*WVCRHA
Trigger: AGCGTGCCTGCAGACCCAGCACCTCCCTCCAGGGAT...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TGGGGTCTCTGGCAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGCCACCAGGACTCTTCTaGAGGATGCGAAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: WGLWQEVARSCRVIHRLLPPGLF*RMRREQ
Trigger: CTGTTCCCTTCGCATCCTGCAGAAGAGTCCTGGTGG...CAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTGCCAGAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGCCAACTGTGTTCACCTaGCTTCCCCCATGTACGCAA +
Preference number: 4 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLPTVFT*LPPCTQ
Trigger: TTGCGTACATGGGGGAAGGCAGGTGAACACAGTTGG...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCTTGCTGGGGCTGTCTaGCCGGCCTGTGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHLAGAV*PACAPL
Trigger: CAGAGGTGCACAGGCCGGCCAGACAGCCCCAGCAAG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCAAGCCGCTCCGACCTTTaGGACTCCCAAACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: WVQMAGALGSSHRSLEASSRSDL*DSQTLV
Trigger: AACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCT...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGGGTCACCAGGGCCATaGCTGCGGCGCGGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMGSPGP*LRRGAR
Trigger: CCTCGCACCGCGCCGCAGCCATGGCCCTGGTGACCC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGGCGGCGCTGGGCGTaGGCGAGCGCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRRRWA*ASAAGS
Trigger: TGACCCTGCAGCGCTCGCCCACGCCCAGCGCCGCCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGGGGAGGACGTGATGTaGGGTAGGAAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGGEDVM*GRKAGW
Trigger: CCAGCCAGCCTTCCTACCCCACATCACGTCCTCCCC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCGAACACGGGACCTGCTaGCCAAGTGGGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCEHGTC*PSGPQG
Trigger: CCCCTGTGGCCCACTTGGCCAGCAGGTCCCGTGTTC...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTCGGGGGAGGTTCGGTTaGGCCAGAGGCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPRGRFG*ARGWLL
Trigger: GAGAAGCCAGCCTCTGGCCCAACCGAACCTCCCCCG...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCCTGGCCGGCGGCTCCTaGTTCTCCCAGGCCACACGA +
Preference number: 4 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSLAGGS*FSQATR
Trigger: TCGTGTGGCCTGGGAGAACCAGGAGCCGCCGGCCAG...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCTGGCGCAGCGGGACTaGCTGAGCTCACCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQLAQRD*LSSPES
Trigger: AGACTCAGGTGAGCTCAGCCAGTCCCGCTGCGCCAG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGGGCCAATGCCTGCCTaGCCTGCAGGAACCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPGPMPA*PAGTAS
Trigger: ACTGGCGGTTCCTGCAGGCCAGGCAGGCATTGGCCC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp TGCCCCATACATTTCCCAGTCTCCCTGGCTGTTGCATaGGGACCCTGTGACTGGGCCCTGCCCACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CPIHFPVSLAVA*GPCDWALPTGK
Trigger: CTTTCCAGTGGGCAGGGCCCAGTCACAGGGTCCCAATGCAACAGCCAGGGAGACTGGGAAATGTATGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp ACATGTGCCCCATACATTTCCCAGTCTCCCTGGCTGTaGCATTGGGACCCTGTGACTGGGCCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: TCAPYISQSPWL*HWDPVTGPCPL
Trigger: CAGTGGGCAGGGCCCAGTCACAGGGTCCCAATGCAACAGCCAGGGAGACTGGGAAATGTATGGGGCACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGTGGCGTTCCACTCGTTaGTGCAGCTCTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQWRSTR*CSSARS
Trigger: GCTCCGAGCAGAGCTGCATCAACGAGTGGAACGCCA...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCCGCGTTGGGGCGCGTaGTGCTGCGCTTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCPRWGA*CCASAL
Trigger: TAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCGG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTACCGCGTTGGGGCGCGTaGTGCTGCGCTTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLPRWGA*CCASAL
Trigger: TAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCGG...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CTTCACATCCTTCTCACAGAGTCCGGAACCTTGCTGGGGCTGTCTGGCCGGCCTCTTGGCAAGAGAGTGTaGGCGCTTCAGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LHILLTESGTLLGLSGRPLGKRV*ALQWGR
Trigger: TCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAG...AGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGTGAGAAGGATGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp CTTCACATCCTTCTCACAGAGTCCGGAACCTTGCTGGGGCTGTCTGGCCGGCCTCTTCCGTTGAGAAGGTaGGACTCCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LHILLTESGTLLGLSGRPLPLRR*DSPAWQ
Trigger: TTGCCAAGCTGGGGAGTCTCACCTTCTCAACGGAAG...AGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGTGAGAAGGATGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCTGCGAGGCCAAGAATaGGCTAGAACGTGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVLRGQE*ARTCAA
Trigger: CGCGGCACACGTTCTAGCTCATTCTTGGCCTCGCAG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAGGGGGTCCCCTCGCTaGGTTGCGTGTTTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQRGSPR*VACLEE
Trigger: CTCCTCTAAACACGCAACTCAGCGAGGGGACCCCCT...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTGTCCTGGCGCCCGCTaGTGTACACCACCACCATGT +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGCPGAR*CTPPPC
Trigger: ACATGGTGGTGGTGTACAGCAGCGGGCGCCAGGACA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGATGGCTGCGGCGCGGTaGGAGGGCGCCACAGACGTC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMMAAAR*EGATDV
Trigger: GACGTCTGTGGCGCCCTCGCACCGCGCCGCAGCCAT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGGCGTGGGCGAGCGCTaGAGGGTCACCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMGVGER*RVTRAM
Trigger: CATGGCCCTGGTGACCCTGCAGCGCTCGCCCACGCC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR GCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACACCGGAACACGGGACCTaGTGGCCAAGTGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETPEHGT*WPSGPQ
Trigger: CTGTGGCCCACTTGGCCAGCAGGTCCCGTGTTCCGG...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACATCCCTGGAGGGAGGTaGTGGGTCTGCAGGCACGCT +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHIPGGR*WVCRHA
Trigger: AGCGTGCCTGCAGACCCAGCACCTCCCTCCAGGGAT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGATCTCCTGTGTCCGCTaGTTCACCAGCCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQISCVR*FTSPGF
Trigger: GAAGCCCGGGCTGGTGAAGCAGCGGACACAGGAGAT...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CTTCACATCCTTCTCACAGAGTCCGGAACCTTGCTGGGGCTGTCTGGCCGGCCTCAACCTACTCCATCCTaGACAGGTGAGGCTAGTGCG +
Preference number: 4 (lower is better)
Translates to: LHILLTESGTLLGLSGRPQPTPS*TGEASA
Trigger: CGCACTAGCCTCACCTGTGCAGGATGGAGTAGGTTG...AGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGTGAGAAGGATGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATGCACCCAGGCTGGAGTaGAGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDAPRLE*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGC...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGGCACCCAGGCTGGAGTaGAGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLEAPRLE*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGC...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCCTGCCTCCTCTGCCTaGCTCTTTCCTGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIPASSA*LFPVPL
Trigger: AAGTGGCACAGGAAAGAGGCAGGCAGAGGAGGCAGG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCAATGCCTGCCTGGCCTaGAGGAACCGCCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEINACLA*RNRQCC
Trigger: ACAACACTGGCGGTTCCTGCAGGCCAGGCAGGCATT...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCACAGCATGGGCCAATaGCTGCCTGGCCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLHSMGQ*LPGLQE
Trigger: TTCCTGCAGGCCAGGCAGGCATTGGCCCATGCTGTG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGCCATCTGGGGTCTCTaGCAAGAAGTCGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGAIWGL*QEVARS
Trigger: GGACCTGGCGACTTCTTGCCAGAGACCCCAGATGGC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACACTTGCTGGGGCTGTCTaGCCGGCCTGTGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETLAGAV*PACAPL
Trigger: CAGAGGTGCACAGGCCGGCCAGACAGCCCCAGCAAG...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATAGTCCGGAACCTTGCTaGGGCTGTCTGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDSPEPC*GCLAGL
Trigger: CAGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGTTGATCGAGCTGGGTTaGAAGCTGCCCCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQLIELG*KLPPPP
Trigger: GGGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAA...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCAGATGGCGGGAGCATTaGGGTCCTCACATCGCTCCC +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVRWREH*GPHIAP
Trigger: GGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCT...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTACTGGCTGGGTGCAGATaGCGGGAGCATTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLLAGCR*REHWGP
Trigger: AGGACCCCAATGCTCCCGCCATCTGCACCCAGCCAG...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTCTGGCTGGGTGCAGATaGCGGGAGCATTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPLAGCR*REHWGP
Trigger: AGGACCCCAATGCTCCCGCCATCTGCACCCAGCCAG...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGACCTGCTGGCCAAGTaGGCCACAGGGGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASDLLAK*ATGEDV
Trigger: CACGTCCTCCCCTGTGGCCCACTTGGCCAGCAGGTC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGTGGTGTCTGCCCTCCTaGAGCCTGCTGGTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: KVRLPSLARECERFSGEEWCLPS*SLLVVG
Trigger: TCCTACCACCAGCAGGCTCCAGGAGGGCAGACACCA...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGGATGCTATCGCTGCTaGAGCTCCGGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLGCYRC*SSGSGW
Trigger: CCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGGGAGTCAGCGACGGTaGACGGGTCAGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETGSQRR*TGQPHW
Trigger: CCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGTTTCCCTTCCCTAGATaGGCCCTAGTGGACCTAAGC +
Preference number: 4 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSFPFPR*ALVDLS
Trigger: GCTTAGGTCCACTAGGGCCCATCTAGGGAAGGGAAA...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCTGGCGCAGCGGGACTaGCTGAGCTCACCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCLAQRD*LSSPES
Trigger: AGACTCAGGTGAGCTCAGCCAGTCCCGCTGCGCCAG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCATGAGCAGCCCTGTGTaGCAAATCAAACCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVMSSPV*QIKPGV
Trigger: GACCCCTGGTTTGATTTGCCACACAGGGCTGCTCAT...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCTTCACTCTGCTCTGTaGACGGGACCAGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQLHSAL*TGPALS
Trigger: CGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGGCAGGTGCTGGACTCTaGTGCAGAGGCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLEAGAGL*CRGCLA
Trigger: GGCCAGGCAGCCTCTGCACCAGAGTCCAGCACCTGC...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCCGGGGAAGTAGTTGTGCCTCCGGGCCACTTCGCAGGCCTTGTGAAGCACCTGCGCAACGCAGAAGGTTaGTCATCACCTGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: PGEVVVPPGHFAGLVKHLRNAEG*SSPEDV
Trigger: AACATCTTCAGGTGATGATCAACCTTCTGCGTTGCG...CAGGTGCTTCACAAGGCCTGCGAAGTGGCCCGGAGGCACAACTACTTCCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGGCGCACTGCCAGCTTaGTTCTGTCTTCGCAACGCA +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLGALPA*FCLRNA
Trigger: TGCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCTGCTGTCTGTCTGCTaGCGCCACAGCTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQLLSVC*RHSLLC
Trigger: GCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGTGGGGAAGAGACGGTaGGGCCCGCCAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEVGKRR*GPPAGA
Trigger: GGCTCCGGCTGGCGGGCCTCACCGTCTCTTCCCCAC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACCGCAGCGGGACTGGCTaGGCTCACCTGAGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINRSGTG*AHLSLK
Trigger: TTTAAGACTCAGGTGAGCTCAGCCAGTCCCGCTGCG...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCGTACTCCAGCCTAGGTaGCAGAGCCAGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCVLQPR*QSQALS
Trigger: AGACAGGGCCTGGCTCTGTCACCTAGGCTGGAGTAC...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCTTCCTACAGGGCCATaGGCAGCCCTGTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQLPTGP*AALCGK
Trigger: TTTGCCACACAGGGCTGCTCATGGCCCTGTAGGAAG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGCTCTGTGGCTCAGGTaGCACAGTGTGTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVALWLR*HSVSGC
Trigger: GCATCCAGACACACTGTGTCACCTGAGCCACAGAGC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CATGTACCGGACCCGGTCCGCCCAGGCGCTCTCCAGGCGCACTGCCAGCTTGATGAACCATCCCAATGGTaGAGCTTTTACTTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: HVPDPVRPGALQAHCQLDEPSQW*SFYFPY
Trigger: GTAAGGAAAGTAAAAGCTGCACCATTGGGATGGTTC...ATCAAGCTGGCAGTGCGCCTGGAGAGCGCCTGGGCGGACCGGGTCCGGTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGGGGTGTGCCACCCTaGAGGCCGGGCTCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMWGVPP*RPGSAY
Trigger: GTAGGCAGAGCCCGGCCTGCAGGGTGGCACACCCCA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCACGGACACTGTGGATaGTATCGCTGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLHGHCG*YRCWSS
Trigger: GGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAATCTCCTGTGTCCGCTaGTTCACCAGCCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLISCVR*FTSPGF
Trigger: GAAGCCCGGGCTGGTGAAGCAGCGGACACAGGAGAT...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCAGGCGGGTCAGCTTTTaGTCATCCACGAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIRRVSF*SSTKGS
Trigger: AGAGCCCTTCGTGGATGAGCAAAAGCTGACCCGCCT...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCGCAGACACTCAACAATaGAGGTGGGCCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIADTQQ*RWALPL
Trigger: AAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGC...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGTTGGCTGGGGTCCCTaGATGGAGAGCAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVVGWGP*MESKEA
Trigger: TGCTTCCTTGCTCTCCATGCAGGGACCCCAGCCAAC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCAGGCGTGAGCCACCGTaGCCAACCCTCTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCRREPP*PTLSPL
Trigger: AAGAGGTGAGAGGGTTGGGCACGGTGGCTCACGCCT...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACGCCATCTGGGGTCTCTaGCAAGAAGTCGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHAIWGL*QEVARS
Trigger: GGACCTGGCGACTTCTTGCCAGAGACCCCAGATGGC...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTTCCGGGGTGCCATCTaGGGTCTCTGGCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGFRGAI*GLWQEV
Trigger: GACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCCAACTCGCTGTTGCTaGCCGAGGAGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMPTRCC*PRRRRR
Trigger: GCGCCGCCTCCTCCTCGGCCAGCAACAGCGAGTTGG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATGGTAGGAAGGCTGGCTaGGTGCAGATGGCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDGRKAG*VQMAGA
Trigger: TGCTCCCGCCATCTGCACCCAGCCAGCCTTCCTACC...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCGGTTGGGCCAGAGGCTaGCTTCTCCGGAACACGGGA +
Preference number: 4 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSGWARG*LLRNTG
Trigger: TCCCGTGTTCCGGAGAAGCCAGCCTCTGGCCCAACC...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCCTGGAGGGAGGTGCTaGGTCTGCAGGCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLEPGGRC*VCRHAL
Trigger: AAGAGCGTGCCTGCAGACCCAGCACCTCCCTCCAGG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCTGGCCTCCAGCCTGCTaGCAGGGCCATCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLWPPAC*QGHPWR
Trigger: CCTCCAGGGATGGCCCTGCCAGCAGGCTGGAGGCCA...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAGCTCCGGGTCAGGTTaGAGCTCATGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQSSGSG*SSWKRR
Trigger: CCTCCTCTTCCATGAGCTCCAACCTGACCCGGAGCT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCATTACTCAGCAGTGCTTaGGGCTGTCGGGTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: WVQMAGALGSSHRSLEASLLSSA*GCRVKS
Trigger: ACTTTTAACCCGACAGCCCCAAGCACTGCTGAGTAA...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACTGTGTGACTGGGGAATaGGCAGGTGCTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINCVTGE*AGAGLW
Trigger: CCAGAGTCCAGCACCTGCCCATTCCCCAGTCACACA...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCTCTCCCACCAGGGCTaGTGGGAGCAGGTTAGATGT +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLLSHQG*WEQVRC
Trigger: ACATCTAACCTGCTCCCACCAGCCCTGGTGGGAGAG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACATTAGCGGGGCAAGGTaGTGCACGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINISGAR*CTPVVP
Trigger: TGGGACTACAGGCGTGCACCACCTTGCCCCGCTAAT...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTTGGGACCCTGTGACTaGGCCCTGCCCACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCLGPCD*ALPTGK
Trigger: CTTTCCAGTGGGCAGGGCCCAGTCACAGGGTCCCAA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCAATTTCCCAGGGGCTaGGGGCTTCATCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIQFPRG*GLHLQL
Trigger: GAGTTGGAGATGAAGCCCCCAGCCCCTGGGAAATTG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp CCAGGTGTCACCAAGTTTCTGATCTACCCAGCTCTCTaGCCAGAGGTGAAGGGGGTCCCCTCGCTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: PGVTKFLIYPAL*PEVKGVPSLSC
Trigger: GCAACTCAGCGAGGGGACCCCCTTCACCTCTGGCAAGAGAGCTGGGTAGATCAGAAACTTGGTGACACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp ATCCCCCTAAGTTCCAAGCCGTCCTCTGTGCTGCCTTaGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: IPLSSKPSSVLP*EPLPNILPRGG
Trigger: ACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGGCAGCACAGAGGACGGCTTGGAACTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp TTTCTTCTTCACATCCTTCTCACAGAGTCCGGAACCTaGCTGGGGCTGTCTGGCCGGCCTGTGCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: FLLHILLTESGT*LGLSGRPVHLC
Trigger: GCAGAGGTGCACAGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGTGAGAAGGATGTGAAGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp GCTCTGCTCGGAGCTGATGCAGCTCTCATAGTAGGTAGCCCAGATGAGAGCTACGGCGCACTGCCAGCTTaGTTCTGTCTTCGCAACGCA +
Preference number: 4 (lower is better)
Translates to: ALLGADAALIVGSPDESYGALPA*FCLRNA
Trigger: TGCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCC...GTAGCTCTCATCTGGGCTACCTACTATGAGAGCTGCATCAGCTCCGAGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATAGGCAGAAGGGGGTCTaGGAGTCGCCGGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDRQKGV*ESPETA
Trigger: TGCTGTTTCCGGCGACTCTCAGACCCCCTTCTGCCT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCATCTCAGATTCATTACTaGACAGAAGCCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: WVQMAGALGSSHRSLEASSQIHY*TEASGP
Trigger: AGGACCTGAGGCTTCTGTTCAGTAATGAATCTGAGA...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGGGAAGAGACGGTaGGGCCCGCCAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFVGKRR*GPPAGA
Trigger: GGCTCCGGCTGGCGGGCCTCACCGTCTCTTCCCCAC...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCTTGGCAAGAGAGTGTaGGCGCTTCAGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQLGKRV*ALQWGR
Trigger: TCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTGGGGCGGGTTTCCCTaGTGGTTTGGAGGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDWGGFP*WFGGCS
Trigger: GCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTTTTCGGGGAAGCCGCTaGAATCTCCTTTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLFRGSR*NLLSLP
Trigger: GGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAA...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCGCAGCGGGACTGGCTaGGCTCACCTGAGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHRSGTG*AHLSLK
Trigger: TTTAAGACTCAGGTGAGCTCAGCCAGTCCCGCTGCG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGTCGTTGATGCAGCTCTaGTCGGAGCTGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQSLMQL*SELMQL
Trigger: GAGCTGCATCAGCTCCGAGCAGAGCTGCATCAACGA...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGGTAGACTCCAGGTCCTaGATGGCGTTCCACTCGTTG +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQVDSRS*MAFHSL
Trigger: CAACGAGTGGAACGCCATGCAGGACCTGGAGTCTAC...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCGCCACAGCTTGTTGTaGCGCTGTTTGCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLRHSLL*RCLLAS
Trigger: GGATGCAAGCAAACAGCGGCACAACAAGCTGTGGCG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGCTGGGTTGGAAGCTaGCCCCACCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSWVGS*PHLPAP
Trigger: GGGAGCAGGGAGGTGGGGGCAGCTTCCAACCCAGCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTGCAGGCCGGGCTCTaGCTACCTCCATGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLQAGL*LPPCRW
Trigger: CCAACGGCATGGAGGTAGGCAGAGCCCGGCCTGCAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCCTCCAACTCGCTGTTaGTGGCCGAGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMPPTRC*WPRRRR
Trigger: CCGCCTCCTCCTCGGCCAGCAACAGCGAGTTGGAGG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGCTCTTTGGTGTGCTTaGGGACCAAGCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVALWCA*GPSLPS
Trigger: AGAAGGCAGGCTTGGTCCGCAAGCACACCAAAGAGC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGGCAGACACTCAACAATaGAGGTGGGCCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQADTQQ*RWALPL
Trigger: AAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGC...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCTTATACTCCCTCACTaGTGCTGGGAAGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEILILPH*CWEELE
Trigger: CTCCAGCTCTTCCCAGCAGCAGTGAGGGAGTATAAG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCAACCTACTCCATCCTaGACAGGTGAGGCTAGTGCG +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVQPTPS*TGEASA
Trigger: CGCACTAGCCTCACCTGTGCAGGATGGAGTAGGTTG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTACCTGCCTCCTCTGCCTaGCTCTTTCCTGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLPASSA*LFPVPL
Trigger: AAGTGGCACAGGAAAGAGGCAGGCAGAGGAGGCAGG...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTCAGTGAGCCATGACTaGCACTGCACTCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGSVSHD*HCTPGC
Trigger: ACAGCCTGGAGTGCAGTGGCAGTCATGGCTCACTGA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGAGGCTGAGGCAGGATTaGTGGAGCCCAGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGRLRQD*WSPGDQ
Trigger: TTGATCTCCTGGGCTCCAGCAATCCTGCCTCAGCCT...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCCAAGCCGTCCTCTGTaGTGCCTTTGGAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLEPSRPL*CLWSLS
Trigger: GGAGAGGCTCCAAAGGCAGCACAGAGGACGGCTTGG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGGGGCGAGGAGGTCTGTaGTCTCTTCATCGTAGACTC +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQGRGGL*SLHRRL
Trigger: GAGTCTACGATGAAGAGACCACAGACCTCCTCGCCC...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGTCCGGATCCTCCAGGTaGACCAAGCTGCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: KVRLPSLARECERFSGEESGSSR*TKLPVS
Trigger: TGAAACTGGCAGCTTGGTCCACCTGGAGGATCCGGA...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTTGCTGGGGCTGTCTaGCCGGCCTGTGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLAGAV*PACAPL
Trigger: CAGAGGTGCACAGGCCGGCCAGACAGCCCCAGCAAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGTCCGGAACCTTGCTaGGGCTGTCTGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSPEPC*GCLAGL
Trigger: CAGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTTGATCGAGCTGGGTTaGAAGCTGCCCCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDLIELG*KLPPPP
Trigger: GGGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCATCCTCCATGCCGTTaGGACAGCTCCTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQHPPCR*DSSSCC
Trigger: ACAGCAAGAGGAGCTGTCCCAACGGCATGGAGGATG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACAGCGCGGCTGGATCCTaGCTCTCCTCGGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNSAAGS*LSSGML
Trigger: CAGCATCCCCGAGGAGAGCCAGGATCCAGCCGCGCT...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGGGAGTCAGCGACGGTaGACGGGTCAGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLGSQRR*TGQPHW
Trigger: CCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTACTCAAAGTGGTGTCCTaGGAGTCAGCGACGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLLKVVS*ESATVD
Trigger: GTCCACCGTCGCTGACTCCCAGGACACCACTTTGAG...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTCCCTCGGGGTTCCCTaGGGCTCATGCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCSLGVP*GSCKKE
Trigger: TTCCTTCTTGCATGAGCCCCAGGGAACCCCGAGGGA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGGTTTCCCTGATGGTTTaGAGGTTGCAGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQVSLMV*RLQLGP
Trigger: GGGACCCAGCTGCAACCTCCAAACCATCAGGGAAAC...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAAGGCTAGTGCGGGGCTaGCAAAGCTTGTGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASRLVRG*QSLWSG
Trigger: TCCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCT...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATAGGCTAGTGCGGGGCTaGCAAAGCTTGTGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDRLVRG*QSLWSG
Trigger: TCCCGACCACAAGCTTTGCCAGCCCCGCACTAGCCT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCTTCACTCTGCTCTGTaGACGGGACCAGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLELHSAL*TGPALS
Trigger: CGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCTGAAGAGGACAGGGTaGAGCAGAATGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQLKRTG*SRMGLD
Trigger: GTCCAAGCCCATTCTGCTCCACCCTGTCCTCTTCAG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACGGGCCCCAGCACCTATaGCCAAACAAGAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHGPQHL*PNKKTA
Trigger: TGCCGTCTTCTTGTTTGGCCATAGGTGCTGGGGCCC...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTGGCTCTGCAGGCACTaGAATTTAGGGGTCACGCCC +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCWLCRH*NLGVTP
Trigger: GGGCGTGACCCCTAAATTCCAGTGCCTGCAGAGCCA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACCCTCTGTGCTGCCTTTaGAGCCTCTCCCGAACATCT +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINPLCCL*SLSRTS
Trigger: AGATGTTCGGGAGAGGCTCCAAAGGCAGCACAGAGG...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACAGCCACTCAAGTAGCTaGGACCACTGGCACACCACC +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHSHSSS*DHWHTT
Trigger: GGTGGTGTGCCAGTGGTCCCAGCTACTTGAGTGGCT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp CCACGGCTGGCTAGCAGACCAAGCTACGTTCTTTCATaGGCTCCTATGGGACACAGCATGGGCCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: PRLASRPSYVLS*APMGHSMGQCL
Trigger: CAGGCATTGGCCCATGCTGTGTCCCATAGGAGCCAATGAAAGAACGTAGCTTGGTCTGCTAGCCAGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp GACAGGTCTTCCGTTGAGAAGGTGAGACTCCCCAGCTaGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DRSSVEKVRLPS*ARECERFSGEE
Trigger: CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTTCTCAACGGAAGACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
3UTR CAA 72 bp CCGCCCAGCCTGACGCAGCAAAAGGCGGGTCAGCTTTaGCTCATCCACGAAGGGCTCTTTAAGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPSLTQQKAGQL*LIHEGLFKFSG
Trigger: CCCAGAAAACTTAAAGAGCCCTTCGTGGATGAGCAAAAGCTGACCCGCCTTTTGCTGCGTCAGGCTGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp GAAGGAAGATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCGATCCTGGCTCATCATaGTGCTTCGGAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: EGRFTQSGVLGVSDGGRVDPGSS*CFGAWL
Trigger: AAGCCAAGCTCCGAAGCATCATGATGAGCCAGGATC...GACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCCGCGTTGGGGCGCGTaGTGCTGCGCTTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMPRWGA*CCASAL
Trigger: TAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCGG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGAGTTGAGCAGGTTTTaGTCGAGCTGGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLELSRF*SSWVGS
Trigger: GCTTCCAACCCAGCTCGATCAAAACCTGCTCAACTC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCACTTCAGAAAGTCTTTTaGGAAACTACTGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: WVQMAGALGSSHRSLEASLQKVF*ETTGVV
Trigger: GACCACACCAGTAGTTTCTCAAAAGACTTTCTGAAG...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGGACAGGTCTTCCGTTaGGAAGGTGAGACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASGQVFR*EGETPQ
Trigger: CTGGGGAGTCTCACCTTCTCAACGGAAGACCTGTCC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACGTAAAAGCCATCGCTTaGGCCAGGGAGGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINVKAIA*AREVDA
Trigger: AGCATCAACCTCCCTGGCTCAAGCGATGGCTTTTAC...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCTTCCTACAGGGCCATaGGCAGCCCTGTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDLPTGP*AALCGK
Trigger: TTTGCCACACAGGGCTGCTCATGGCCCTGTAGGAAG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGAGTCCAGGGCCGTGCTaGGGGTCTGTTCTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLESPGPC*GSVLFK
Trigger: CTTGAACAGAACAGACCCTCAGCACGGCCCTGGACT...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAAGTGGACTGGGACATaGGCATGCACCTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQKWTGT*ACTLET
Trigger: GGTTTCCAAGGTGCATGCTCATGTCCCAGTCCACTT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCAAAAGCTGCCTGGGGTaGAGTGGACTGGGACATGAG +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCKSCLG*SGLGHE
Trigger: CTCATGTCCCAGTCCACTTCACCCCAGGCAGCTTTT...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAAGTCGAGGTTGCAGTaGGCTATGATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQKSRLQ*AMMAPL
Trigger: CAGTGGTGCCATCATAGCTCACTGCAACCTCGACTT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTATACCTGGGCTGGTCTTaGACTCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLYLGWS*TPGLKQ
Trigger: TTGCTTGAGCCCAGGAGTTCAAGACCAGCCCAGGTA...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GCTCACGCTGAACCCACCATCTCCATCAAGGTGGATTTTCGTGTCGCTCCACAGGCTCTCCAGGCGCACTaGCAGCTTGATTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AHAEPTISIKVDFRVAPQALQAH*QLDSVF
Trigger: GAAGACAGAATCAAGCTGGCAGTGCGCCTGGAGAGC...CTGTGGAGCGACACGAAAATCCACCTTGATGGAGATGGTGGGTTCAGCGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGACTCACGCCCATTTTaGAATGCACCAGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVDSRPF*NAPGTW
Trigger: CCAAGTGCCTGGTGCATTGCAAAATGGGCGTGAGTC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGCTGGCTTTCCGGGGTaGCATCTGGGGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMAGFPG*HLGSLA
Trigger: TGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCCAGGTGGACCAAGCTaGCAGTTTCATCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDPGGPS*QFHPQG
Trigger: CCCCTGAGGATGAAACTGGCAGCTTGGTCCACCTGG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCGGCCTGTGCACCTCTaGAGGTGGAGCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRPVHL*RWSSFL
Trigger: GAGGAAGCTGCTCCACCTGCAGAGGTGCACAGGCCG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCGGCCTGTGCACCTCTaGAGGTGGAGCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLRPVHL*RWSSFL
Trigger: GAGGAAGCTGCTCCACCTGCAGAGGTGCACAGGCCG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGTCTGGCCGGCCTGTaGACCTCTGCAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMCLAGL*TSAGGA
Trigger: TGCTCCACCTGCAGAGGTGCACAGGCCGGCCAGACA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCTGTCTGGCCGGCCTGTaGACCTCTGCAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLCLAGL*TSAGGA
Trigger: TGCTCCACCTGCAGAGGTGCACAGGCCGGCCAGACA...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCCGTCTCCTCCACCTaGAGCAAGGAGCCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSVSST*SKEPLR
Trigger: TCGGAGCGGCTCCTTGCTGCAGGTGGAGGAGACGGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAGCTCTTTGGTGTGCTTaGGGACCAAGCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLALWCA*GPSLPS
Trigger: AGAAGGCAGGCTTGGTCCGCAAGCACACCAAAGAGC...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTCTAGCTCTTTGGTGTaGTTGCGGACCAAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCSSSLV*LRTKPA
Trigger: GGCAGGCTTGGTCCGCAAGCACACCAAAGAGCTAGA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCACGGACACTGTGGATaGTATCGCTGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDHGHCG*YRCWSS
Trigger: GGAGCTCCAGCAGCGATAGCATCCACAGTGTCCGTG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCCACCAGGACTCTTCTaGAGGATGCGAAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCPPGLF*RMRREQ
Trigger: CTGTTCCCTTCGCATCCTGCAGAAGAGTCCTGGTGG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTCAGAATGCTTCACTCTaGTCTGTGGACGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPQNASL*SVDGTS
Trigger: GCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTG...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCCGACACCTGACAGAATaGTCATCTTGTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVRHLTE*SSCSYS
Trigger: GCTGTATGAACAAGATGAGCATTCTGTCAGGTGTCG...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGGAGGACTGGTGATCTaGTTATCGGGACTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVGGLVI*LSGLLS
Trigger: AGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGGCAGCTATCTTCTCATaGAGCAAGGCCGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQAAIFS*SKADRK
Trigger: CTTCCTGTCGGCCTTGCTGCATGAGAAGATAGCTGC...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAGCCATGACTGCCACTaGACTCCAGGCTGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQSHDCH*TPGCLK
Trigger: TTTGAGACAGCCTGGAGTGCAGTGGCAGTCATGGCT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTCTCCTCGGTGTCCTaGCGCCCGCTGCTGTACACC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMFSSVS*RPLLYT
Trigger: GGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCTTCTCCTCGGTGTCCTaGCGCCCGCTGCTGTACACC +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLFSSVS*RPLLYT
Trigger: GGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAA...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTCCAAGAAGGGCAGCTaGCTTTCCGGGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDSKKGS*LSGVPS
Trigger: AGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGGCCCTAAGCCGGGCTaGGCGGCATCATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMGPKPG*AASSKK
Trigger: CTTCTTGGATGATGCCGCCCAGCCCGGCTTAGGGCC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGGCCCTAAGCCGGGCTaGGCGGCATCATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLGPKPG*AASSKK
Trigger: CTTCTTGGATGATGCCGCCCAGCCCGGCTTAGGGCC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTCATCCTCCATGCCGTTaGGACAGCTCCTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPHPPCR*DSSSCC
Trigger: ACAGCAAGAGGAGCTGTCCCAACGGCATGGAGGATG...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGGCCGCTCTAGCTCTTTaGTGTGCTTGCGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLEAALAL*CACGPS
Trigger: GCTTGGTCCGCAAGCACACCAAAGAGCTAGAGCGGC...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CGCGTTGGGGCGCGTGATGCTGCGCTTCTGCTTTACATAGTTATATGCTTTTTCCCTGGAGGGAGGTGCTaGGTCTGCAGGCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: RVGARDAALLLYIVICFFPGGRC*VCRHAL
Trigger: AAGAGCGTGCCTGCAGACCCAGCACCTCCCTCCAGG...GAAAAAGCATATAACTATGTAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGCTCGTGGAGCGCGGCTaGATCCTGGCTCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWELVERG*ILALLG
Trigger: CCCGAGGAGAGCCAGGATCCAGCCGCGCTCCACGAG...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCTCAAAGTGGTGTCCTaGGAGTCAGCGACGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLELKVVS*ESATVD
Trigger: GTCCACCGTCGCTGACTCCCAGGACACCACTTTGAG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCATCCCTCGGGGTTCCCTaGGGCTCATGCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASSLGVP*GSCKKE
Trigger: TTCCTTCTTGCATGAGCCCCAGGGAACCCCGAGGGA...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGGCGAAGGGAACAGTCTaGATGTGTGCGCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQAKGTV*MCAPMC
Trigger: ACACATAGGCGCACACATCCAGACTGTTCCCTTCGC...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCCTCCCTCACTGCTGCTaGGAAGAGCTGGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSLPHCC*EELEGN
Trigger: GTTTCCCTCCAGCTCTTCCCAGCAGCAGTGAGGGAG...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGTTCACTGAGTTAATCTaGCGGACCCAGCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQFTELI*RTQLRA
Trigger: TGCCCTCAGCTGGGTCCGCCAGATTAACTCAGTGAA...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTTGTGGAGCTCCTGATTaGGGAAGGGACAGGGATTGG +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPCGAPD*GRDRDW
Trigger: CCAATCCCTGTCCCTTCCCCAATCAGGAGCTCCACA...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTCCCACCAGGGCTGGTaGGAGCAGGTTAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCSHQGW*EQVRCS
Trigger: AGAACATCTAACCTGCTCCCACCAGCCCTGGTGGGA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp TCCTCTGTGCTGCCTTTGGAGCCTCTCCCGAACATCTaGCCAAGAGGGGGTTCCCCAGGCATAAACACAAAC +
Preference number: 4 (lower is better)
Translates to: SSVLPLEPLPNI*PRGGSPGINTN
Trigger: GTTTGTGTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGGCAGCACAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCTGCTGTGCTCACGCTaGACCCACCATCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDLLCSR*THHLHQ
Trigger: TTGATGGAGATGGTGGGTTCAGCGTGAGCACAGCAG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GGCCTGGACAGACACAGGCTTAAATATGTGCATCCTTCCTGCTGTGCTCACGCTCTGCTGTGCTCACGCTaGACCCACCATCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: GLDRHRLKYVHPSCCAHALLCSR*THHLHQ
Trigger: TTGATGGAGATGGTGGGTTCAGCGTGAGCACAGCAG...AGCGTGAGCACAGCAGGAAGGATGCACATATTTAAGCCTGTGTCTGTCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGGCGTTCCACTCGTTaGTGCAGCTCTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMWRSTR*CSSARS
Trigger: GCTCCGAGCAGAGCTGCATCAACGAGTGGAACGCCA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGGCAGAAGGGGGTCTaGGAGTCGCCGGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRQKGV*ESPETA
Trigger: TGCTGTTTCCGGCGACTCTCAGACCCCCTTCTGCCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGAGTTGAGCAGGTTTTaGTCGAGCTGGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPELSRF*SSWVGS
Trigger: GCTTCCAACCCAGCTCGATCAAAACCTGCTCAACTC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGAGCGGGGGCGGCCTCTaGCTTCTCATCACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVSGGGL*LLITPG
Trigger: GCCGGGAGTGATGAGAAGTCAGAGGCCGCCCCCGCT...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CGCGTTGGGGCGCGTGATGCTGCGCTTCTGCTTTACATAGTTATATGCTTTTTCTGGGGCGGGTTTCCCTaGTGGTTTGGAGGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RVGARDAALLLYIVICFFWGGFP*WFGGCS
Trigger: GCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCA...GAAAAAGCATATAACTATGTAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCTGCGAGGCCAAGAATaGGCTAGAACGTGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLLRGQE*ARTCAA
Trigger: CGCGGCACACGTTCTAGCTCATTCTTGGCCTCGCAG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGCTTTCTGGTTTCACTaGGTTAATCTGGCGGACCCA +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVAFWFH*VNLADP
Trigger: TGGGTCCGCCAGATTAACTCAGTGAAACCAGAAAGC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAGTTCTCCTCTTCCCGTaGCCACTATCCCCCTTATAC +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLVLLFP*PLSPLY
Trigger: GTATAAGGGGGATAGTGGTCACGGGAAGAGGAGAAC...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCGCGAGACAGTTACTCTaGGGAGGAAATCAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVARQLL*GGNQGK
Trigger: TTTGCCCTGATTTCCTCCTCAGAGTAACTGTCTCGC...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGAAAAGCCAGGAGGCTaGCGAGTGCTTCCACGAGGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMEKPGG*RVLPRG
Trigger: CCCTCGTGGAAGCACTCGGCAGCCTCCTGGCTTTTC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR GCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGCTCTCCAGGCGCACTaGCAGCTTGATTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETALQAH*QLDSVF
Trigger: GAAGACAGAATCAAGCTGGCAGTGCGCCTGGAGAGC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGTCCTGGCGCCCGCTaGTGTACACCACCACCATGT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMCPGAR*CTPPPC
Trigger: ACATGGTGGTGGTGTACAGCAGCGGGCGCCAGGACA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGGGTCATCCACAGGCTaGTGGAGGCTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMGSSTG*WRLLSV
Trigger: GACAGACAGCAGCCTCCAGCAGCCTGTGGATGACCC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp TCGGAGAACCATCCCAATGGTGCAGCTTTTACTTTCCTTACTGGAAAAGTCCACCCTCCAACTCGCTGTTaGTGGCCGAGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SENHPNGAAFTFLTGKVHPPTRC*WPRRRR
Trigger: CCGCCTCCTCCTCGGCCAGCAACAGCGAGTTGGAGG...GTGGACTTTTCCAGTAAGGAAAGTAAAAGCTGCACCATTGGGATGGTTCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTTTCGATCTTCTTCGCTaGCAGCCTCCAACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPFDLLR*QPPTRC
Trigger: ACAGCGAGTTGGAGGCTGGCAGCGAAGAAGATCGAA...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CAAGGTGGATTTTCGTGTCGCTCCACAGTCGGAGAACCATCCCAATGGTGCAGCTTCGATCTTCTTCGCTaGCAGCCTCCAACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: QGGFSCRSTVGEPSQWCSFDLLR*QPPTRC
Trigger: ACAGCGAGTTGGAGGCTGGCAGCGAAGAAGATCGAA...GCTGCACCATTGGGATGGTTCTCCGACTGTGGAGCGACACGAAAATCCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACATCTAGCTCTTTGGTGTaGTTGCGGACCAAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETSSSLV*LRTKPA
Trigger: GGCAGGCTTGGTCCGCAAGCACACCAAAGAGCTAGA...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAAGGCGGGTCAGCTTTTaGTCATCCACGAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASRRVSF*SSTKGS
Trigger: AGAGCCCTTCGTGGATGAGCAAAAGCTGACCCGCCT...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCCAACTGTGTTCACCTaGCTTCCCCCATGTACGCAA +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHPTVFT*LPPCTQ
Trigger: TTGCGTACATGGGGGAAGGCAGGTGAACACAGTTGG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGGCGATCTCGGCTCATTaGAACCTCCGCCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWAISAH*NLRHPG
Trigger: ACCTGGGTGGCGGAGGTTGCAATGAGCCGAGATCGC...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAGGCGCCCGCCATCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQRRPPS*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGATGGCGGGCGCCT...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGCTTCCACGAGGGCTaGGGAGCCAACTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMCFHEG*GANSSS
Trigger: TGAGGAGGAGTTGGCTCCCCAGCCCTCGTGGAAGCA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTGCCCTCCGAGCTCTaGCCATCTGCTCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLPSEL*PSAPYG
Trigger: TCCATAGGGAGCAGATGGCCAGAGCTCGGAGGGCAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGCCATCTGGGGTCTCTaGCAAGAAGTCGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMAIWGL*QEVARS
Trigger: GGACCTGGCGACTTCTTGCCAGAGACCCCAGATGGC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGAGTCCGGAACCTTGCTaGGGCTGTCTGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWESPEPC*GCLAGL
Trigger: CAGGCCGGCCAGACAGCCCCAGCAAGGTTCCGGACT...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTGATCGAGCTGGGTTaGAAGCTGCCCCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLIELG*KLPPPP
Trigger: GGGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGTGGTGTCTGCCCTCCTaGAGCCTGCTGGTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWWCLPS*SLLVVG
Trigger: TCCTACCACCAGCAGGCTCCAGGAGGGCAGACACCA...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCGAAGCCTCAGGTCCTTaGCTGGCTTCATATCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIEASGP*LASYLS
Trigger: AGAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTC...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGCTCGTGGAGCGCGGCTaGATCCTGGCTCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVLVERG*ILALLG
Trigger: CCCGAGGAGAGCCAGGATCCAGCCGCGCTCCACGAG...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GAGGCTGCTGTCTGTCTGCTGACGCCACAGCTTGTTGTGCCGCTGTTTGCTTGCCTTTTGAGAAACTACTaGTGTGGTCCAGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: EAAVCLLTPQLVVPLFACLLRNY*CGPGGR
Trigger: TCTACCGCCTGGACCACACCAGTAGTTTCTCAAAAG...GCAAGCAAACAGCGGCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATACGGGTCAGCCTCACTaGACAGGTCTTCCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDTGQPH*TGLPLR
Trigger: TCTCAACGGAAGACCTGTCCAGTGAGGCTGACCCGT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCGCGAAGGGAACAGTCTaGATGTGTGCGCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCAKGTV*MCAPMC
Trigger: ACACATAGGCGCACACATCCAGACTGTTCCCTTCGC...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGCCCTGGAACAAGCCTTaGTCATTCGTGTGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSPWNKP*SFVCFK
Trigger: TTTAAAACACACGAATGACCAAGGCTTGTTCCAGGG...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTTCACTGAGTTAATCTaGCGGACCCAGCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHFTELI*RTQLRA
Trigger: TGCCCTCAGCTGGGTCCGCCAGATTAACTCAGTGAA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTAGGCTATGCTTTTGTTaGCTGAGGGAAAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLRLCFC*LRERGN
Trigger: GTTCCCCCTTTCCCTCAGCCAACAAAAGCATAGCCT...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTATGGGGTGAAGTGGACTaGGACATGAGCATGCACCTT +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLWGEVD*DMSMHL
Trigger: AAGGTGCATGCTCATGTCCCAGTCCACTTCACCCCA...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGGCAAGGATGCGTGGGTaGGTGGTGTTTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWARMRG*VVFPGW
Trigger: CCACCCAGGAAACACCACCCACCCACGCATCCTTGC...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGCTTCTTTCTACTTCTaGGGTGGGAGAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLASFYF*GGRDSS
Trigger: AGAGCTGTCTCTCCCACCCCAGAAGTAGAAAGAAGC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACCACCCCAATAGCCTTTaGAGCAAGAAGTGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINHPNSL*SKKWVQ
Trigger: TTGGACCCACTTCTTGCTCCAAAGGCTATTGGGGTG...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTGGGGAGAAGATaGTGGGGTAGAAATTGCATG +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEISLGRR*WGRNCM
Trigger: CATGCAATTTCTACCCCACCATCTTCTCCCCAAGGA...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp GTTAATCTGGCGGACCCAGCTGAGGGCAAGATGGAATaGTGGAAGAGCTTCAGCCAACTGTGTTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: VNLADPAEGKME*WKSFSQLCSPA
Trigger: GGCAGGTGAACACAGTTGGCTGAAGCTCTTCCACAATTCCATCTTGCCCTCAGCTGGGTCCGCCAGATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCGCAACGCAGAAGGTTaGTCATCACCTGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQRNAEG*SSPEDV
Trigger: AACATCTTCAGGTGATGATCAACCTTCTGCGTTGCG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGGCGCACTGCCAGCTTaGTTCTGTCTTCGCAACGCA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMGALPA*FCLRNA
Trigger: TGCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGGATCCTGGCTCATCATaGTGCTTCGGAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLEDPGSS*CFGAWL
Trigger: AAGCCAAGCTCCGAAGCATCATGATGAGCCAGGATC...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTGCTGTCTGTCTGCTaGCGCCACAGCTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLLSVC*RHSLLC
Trigger: GCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCCTGCCTTCTGCAGCTaGATGATGGACTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLPAFCS*MMDSWC
Trigger: GCACCAGGAGTCCATCATTCAGCTGCAGAAGGCAGG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGAGGGAGGGATCATATaGAAATATCCGCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASEGGII*KYPPSL
Trigger: CAGGCTGGGCGGATATTTTCATATGATCCCTCCCTC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGAGCATTAGCAACAACTaGGAACAACCCATACATTTT +
Preference number: 4 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLSISNN*EQPIHF
Trigger: AAAATGTATGGGTTGTTCTCAGTTGTTGCTAATGCT...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCCTGAGCCAGACACTTaGGCAATTTCAAACCTAAAC +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIPEPDT*AISNLN
Trigger: GTTTAGGTTTGAAATTGCTCAAGTGTCTGGCTCAGG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATGTAAAAGCCATCGCTTaGGCCAGGGAGGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDVKAIA*AREVDA
Trigger: AGCATCAACCTCCCTGGCTCAAGCGATGGCTTTTAC...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp GAGGCTGCTGTCTGTCTGCTGACGCCACAGCTTGTTGTGCCGCTGTTTGCTTGCTGGCCAATGTTAAGATaGTGGCTCACTCACTCACTT +
Preference number: 4 (lower is better)
Translates to: EAAVCLLTPQLVVPLFACWPMLR*WLTHSL
Trigger: AAGTGAGTGAGTGAGCCATCATCTTAACATTGGCCA...GCAAGCAAACAGCGGCACAACAAGCTGTGGCGTCAGCAGACAGACAGCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCACTACCACATGAAATTTaGTTTGGCAAAACATACCGA +
Preference number: 4 (lower is better)
Translates to: WVQMAGALGSSHRSLEASLPHEI*FGKTYR
Trigger: TCGGTATGTTTTGCCAAATCAAATTTCATGTGGTAG...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCTCTCGTCTGGATGTTaGTATGCTAGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCLSSGC*YASCAS
Trigger: GGAAGCACAGCTAGCATATCAACATCCAGACGAGAG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTTCTGTGTGCACCTGGTaGGCAATCTGTATGCTTAAG +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLSVCTW*AICMLK
Trigger: CTTAAGCATACAGATTGCTCACCAGGTGCACACAGA...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATGGAATGCTCTTTAGCTaGAGAGGACAGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDGMLFS*RGQGGA
Trigger: TGCTCCACCCTGTCCTCTTCAGCTAAAGAGCATTCC...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCCCTCTCACCTCTTTTaGGATATGCATCACAGACCA +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGPSHLF*DMHHRP
Trigger: TGGTCTGTGATGCATATCTCAAAAGAGGTGAGAGGG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAACGCTCCCTACAACTaGCCTCCGAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMNAPYN*PPSSGH
Trigger: ATGGCCAGAGCTCGGAGGGCAGTTGTAGGGAGCGTT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR GCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCTTCCTCCAGATTGGATaGATTCCATTCAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVFLQIG*IPFRAE
Trigger: CTCGGCTCTGAATGGAATGCATCCAATCTGGAGGAA...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCCAGGTGGACCAAGCTaGCAGTTTCATCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMPGGPS*QFHPQG
Trigger: CCCCTGAGGATGAAACTGGCAGCTTGGTCCACCTGG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTCTGCCTACCTCCATaGCGTTGGGACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLCLPP*RWDSSS
Trigger: AGAGGAGCTGTCCCAACGGCATGGAGGTAGGCAGAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGGAAGGCTGGCTGGGTaGAGATGGCGGGAGCATTGG +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEGRLAG*RWREHW
Trigger: CCAATGCTCCCGCCATCTGCACCCAGCCAGCCTTCC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACTTGCGGACCAAGCCTaGCTTCTGCAGCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASLADQA*LLQLND
Trigger: ATCATTCAGCTGCAGAAGGCAGGCTTGGTCCGCAAG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCAGCTCCCCTTCTTGTaGTGCATGTTGGTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLQLPFL*CMLVSF
Trigger: GAAACTAACCAACATGCAGCACAAGAAGGGGAGCTG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCAACAGTCTGGATGTGTaGGCCTATGTGTGCACGTTC +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCNSLDV*AYVCTF
Trigger: GAACGTGCACACATAGGCGCACACATCCAGACTGTT...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAGACTCTTCTGCAGGATaGGAAGGGAACAGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLDSSAG*EGNSLD
Trigger: ATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGCTCACGGGGCCACATaGCATAGTTTGCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLAHGAT*HSLLTP
Trigger: AGGGGTCAGCAAACTATGGCATGTGGCCCCGTGAGC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAATACTTCCTGGCTCTaGAGGCACTGGAATTTAGGG +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQNTSWL*RHWNLG
Trigger: CCCTAAATTCCAGTGCCTGCAGAGCCAGGAAGTATT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTGTGATCTGGGATCGTaGCCAACCGCGAGACAGTTA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDCDLGS*PTARQL
Trigger: TAACTGTCTCGCGGTTGGGCACGATCCCAGATCACA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCTCTCCCGAACATCTTaGCAAGAGGGGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLLSRTS*QEGVPQ
Trigger: CTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTATCCTTTCCCCTTCAGTaGGCTTGTCCACAAATAGCG +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLSFPLQ*ACPQIA
Trigger: CGCTATTTGTGGACAAGCCCACTGAAGGGGAAAGGA...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTCCGGGGTGCCATCTaGGGTCTCTGGCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMFRGAI*GLWQEV
Trigger: GACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCCAAGAAGGGCAGCTaGCTTTCCGGGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSKKGS*LSGVPS
Trigger: AGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCTCCAAGAAGGGCAGCTaGCTTTCCGGGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLSKKGS*LSGVPS
Trigger: AGATGGCACCCCGGAAAGCCAGCTGCCCTTCTTGGA...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCCTCAGGTCCTTGGCTaGCTTCATATCTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHPQVLG*LHIFLG
Trigger: CCCAAGAAAGATATGAAGCCAGCCAAGGACCTGAGG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGGCATCAGGTAGCTGTTaGTTGTCGGCTTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQASGSC*LSASQI
Trigger: AATCTGAGAAGCCGACAACCAACAGCTACCTGATGC...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACGCCGCTCTAGCTCTTTaGTGTGCTTGCGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNAALAL*CACGPS
Trigger: GCTTGGTCCGCAAGCACACCAAAGAGCTAGAGCGGC...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAGCTCAACAACAGCGTaGGACTACTCATCTGATGAC +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQSSTTA*DYSSDD
Trigger: GTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GAAGGAAGATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCAGCTCAACAACAGCGTaGGACTACTCATCTGATGAC +
Preference number: 4 (lower is better)
Translates to: EGRFTQSGVLGVSDGGRVSSTTA*DYSSDD
Trigger: GTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCT...GACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCATTTCCCTTCCCTAGATaGGCCCTAGTGGACCTAAGC +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASFPFPR*ALVDLS
Trigger: GCTTAGGTCCACTAGGGCCCATCTAGGGAAGGGAAA...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAATGAGCAGCCCTGTGTaGCAAATCAAACCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETMSSPV*QIKPGV
Trigger: GACCCCTGGTTTGATTTGCCACACAGGGCTGCTCAT...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGGGCAAGATGGAATTGTaGAAGAGCTTCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQGKMEL*KSFSQL
Trigger: CAGTTGGCTGAAGCTCTTCCACAATTCCATCTTGCC...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGCTACGTTCTTTCATTaGCTCCTATGGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLATFFH*LLWDTA
Trigger: TGCTGTGTCCCATAGGAGCCAATGAAAGAACGTAGC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAATTTCCCAGTCTCCCTaGCTGTTGCATTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETISQSP*LLHWDP
Trigger: AGGGTCCCAATGCAACAGCCAGGGAGACTGGGAAAT...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATACTGTAGATGTGATCTaGGATCGTGCCCAACCGCGA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDTVDVI*DRAQPR
Trigger: TCGCGGTTGGGCACGATCCCAGATCACATCTACAGT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTGGGAGAGACAGCTCTaGGAAGGGTTTCAGATGATG +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHWERQL*EGFQMM
Trigger: CATCATCTGAAACCCTTCCCAGAGCTGTCTCTCCCA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCTTTGGAGCAAGAAGTaGGTCCAATTTCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDLWSKK*VQFPRG
Trigger: GCCCCTGGGAAATTGGACCCACTTCTTGCTCCAAAG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTGCTGTGCTCACGCTaGACCCACCATCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLLCSR*THHLHQ
Trigger: TTGATGGAGATGGTGGGTTCAGCGTGAGCACAGCAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGCTCTGCTCGGAGCTaGTGCAGCTCTCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSSARS*CSSHSR
Trigger: CCTACTATGAGAGCTGCATCAGCTCCGAGCAGAGCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCTGCGCCTTTCACCATaGAAAAGCTCTCACTTAAGC +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHLRLSP*KSSHLS
Trigger: GCTTAAGTGAGAGCTTTTTCATGGTGAAAGGCGCAG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGAATATCCGCCCAGCCTaGCGCAGCAAAAGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKNIRPA*RSKRRV
Trigger: GACCCGCCTTTTGCTGCGTCAGGCTGGGCGGATATT...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGCCCAGGCCACACGACTaGCAGCTCCCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVPRPHD*QLPFLC
Trigger: GCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGG...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATAAACATGGTTCTTCTTaGAGACACGGTGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDKHGSS*RHGGSG
Trigger: TCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAGTGGGCCCTTCCCCTTaGGATTTAAACTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLVGPSP*DLNFSI
Trigger: AATGCTGAAGTTTAAATCTCAAGGGGAAGGGCCCAC...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCCTGAGCCAGACACTTaGGCAATTTCAAACCTAAAC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLPEPDT*AISNLN
Trigger: GTTTAGGTTTGAAATTGCTCAAGTGTCTGGCTCAGG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCTGGCTGAGCTCACCTaGGTCTTAAAGGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFLAELT*VLKGPP
Trigger: GGGCGGCCCCTTTAAGACTCAGGTGAGCTCAGCCAG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCATGCCATAGTTTGCTaGCCCCTGAATTCAACCTTT +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQHAIVC*PLNSTF
Trigger: AAAGGTTGAATTCAGGGGTCAGCAAACTATGGCATG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCATGCCATAGTTTGCTaGCCCCTGAATTCAACCTTT +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGHAIVC*PLNSTF
Trigger: AAAGGTTGAATTCAGGGGTCAGCAAACTATGGCATG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGGCTTTCTGGTTTCACTaGGTTAATCTGGCGGACCCA +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLEAFWFH*VNLADP
Trigger: TGGGTCCGCCAGATTAACTCAGTGAAACCAGAAAGC...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGAATTCAGCTGGTCCTTaGAGGCTTTCTGGTTTCACT +
Preference number: 4 (lower is better)
Translates to: KVRLPSLARECERFSGEENSAGP*RLSGFT
Trigger: AGTGAAACCAGAAAGCCTTCAAGGACCAGCTGAATT...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTTGGCCAATGTTAAGATaGTGGCTCACTCACTCACTT +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLWPMLR*WLTHSL
Trigger: AAGTGAGTGAGTGAGCCATCATCTTAACATTGGCCA...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACTCTCGTCTGGATGTTaGTATGCTAGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASLSSGC*YASCAS
Trigger: GGAAGCACAGCTAGCATATCAACATCCAGACGAGAG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGCTGTTTACATGCAACTaGTCTGGGTTTCCAAAAATA +
Preference number: 4 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSLFTCN*SGFPKI
Trigger: TATTTTTGGAAACCCAGATCAGTTGCATGTAAACAG...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACACAGTGGAGGACTGGTaGTCTGCTTATCGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNTVEDW*SAYRDS
Trigger: GGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGT...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAACGCCCAGGTACTTGTaGCAGTTAGTGCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETTPRYL*QLVLTK
Trigger: TTTGGTGAGCACTAACTGTCACAAGTACCTGGGCGT...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAAGTTTGAGAACAGCCTaGCCAACATGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASSLRTA*PTWRNP
Trigger: GGGGTTTCTCCATGTTGGTCAGGCTGTTCTCAAACT...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCGAGCTCTGGCCATCTaGTCCCTATGGAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRALAI*SLWRSG
Trigger: TCCTGATCTCCATAGGGAGCAGATGGCCAGAGCTCG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTGAGGCAGATCACCTaGATGCTTGTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLRQIT*MLVGVL
Trigger: CAGCACCCCCACAAGCATGCAGGTGATCTGCCTCAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACTTGAGGCAGATCACCTaGATGCTTGTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNLRQIT*MLVGVL
Trigger: CAGCACCCCCACAAGCATGCAGGTGATCTGCCTCAA...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGCTCTCCAGGCGCACTaGCAGCTTGATTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMALQAH*QLDSVF
Trigger: GAAGACAGAATCAAGCTGGCAGTGCGCCTGGAGAGC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCGTTGATGCAGCTCTaGTCGGAGCTGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSLMQL*SELMQL
Trigger: GAGCTGCATCAGCTCCGAGCAGAGCTGCATCAACGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CACTGCCAGCTTGATTCTGTCTTCGCAACGCAGAAGGTTGATCATCACCTGAAGTCGTTGATGCAGCTCTaGTCGGAGCTGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HCQLDSVFATQKVDHHLKSLMQL*SELMQL
Trigger: GAGCTGCATCAGCTCCGAGCAGAGCTGCATCAACGA...CTTCAGGTGATGATCAACCTTCTGCGTTGCGAAGACAGAATCAAGCTGGCAGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGTAGACTCCAGGTCCTaGATGGCGTTCCACTCGTTG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMVDSRS*MAFHSL
Trigger: CAACGAGTGGAACGCCATGCAGGACCTGGAGTCTAC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCATCATACTCAGACAGCTaGCTCATAAAGCCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASSYSDS*LIKPAL
Trigger: CAACGCGGGCTTTATGAGGCAGCTGTCTGAGTATGA...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTCATACTCAGACAGCTaGCTCATAAAGCCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDSYSDS*LIKPAL
Trigger: CAACGCGGGCTTTATGAGGCAGCTGTCTGAGTATGA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCGCCACAGCTTGTTGTaGCGCTGTTTGCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRHSLL*RCLLAS
Trigger: GGATGCAAGCAAACAGCGGCACAACAAGCTGTGGCG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGCTGGCTTTCCGGGGTaGCATCTGGGGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFAGFPG*HLGSLA
Trigger: TGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGC...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGCTGGCTTTCCGGGGTaGCATCTGGGGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVAGFPG*HLGSLA
Trigger: TGCCAGAGACCCCAGATGGCACCCCGGAAAGCCAGC...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp AAGGTGAGACTCCCCAGCTTGGCAAGAGAGTGTGAGCGCTTCAGTGGGGAAGAGTGGGACAGCTCCTCTTaGTGTTGTTGTTTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KVRLPSLARECERFSGEEWDSSS*CCCLGS
Trigger: AGAACCTAAACAACAACAGCAAGAGGAGCTGTCCCA...CTCTTCCCCACTGAAGCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTCAGCTCCCCTTCTTGTaGTGCATGTTGGTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPQLPFL*CMLVSF
Trigger: GAAACTAACCAACATGCAGCACAAGAAGGGGAGCTG...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGTGTGCGCCTATGTGTaGACGTTCTTCCTAAAACAT +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLVCAYV*TFFLKH
Trigger: ATGTTTTAGGAAGAACGTGCACACATAGGCGCACAC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAGCATCAAGTCCAGAATaGTTCACTCTGCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLASSPE*FTLLCG
Trigger: TCCACAGAGCAGAGTGAAGCATTCTGGACTTGATGC...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGCATCAAGTCCAGAATaGTTCACTCTGCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPASSPE*FTLLCG
Trigger: TCCACAGAGCAGAGTGAAGCATTCTGGACTTGATGC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGCGATCTCGGCTCATTaGAACCTCCGCCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEAISAH*NLRHPG
Trigger: ACCTGGGTGGCGGAGGTTGCAATGAGCCGAGATCGC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACTGAGATCACACCATTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASLRSHH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAATGGTGTGATCTCAG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGAGCCGTCCTCTGTGCTaGCTTTGGAGCCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWESRPLC*LWSLSR
Trigger: TCGGGAGAGGCTCCAAAGGCAGCACAGAGGACGGCT...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCTCAAGCAATCTGCCTaGCTCGGCCTCTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNLKQSA*LGLSRC
Trigger: ACACCTTGAGAGGCCGAGGCAGGCAGATTGCTTGAG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TCCAGGCGCACTGCCAGCTTGATTCTGTCTTCGCAACGCAGAAGGTTGATCATCCCATCTCCATCAAGGTaGATTTTCGTGTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SRRTASLILSSQRRRLIIPSPSR*IFVSLH
Trigger: GTGGAGCGACACGAAAATCCACCTTGATGGAGATGG...GATGATCAACCTTCTGCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR CCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCATCCTTTCCCCTTCAGTaGGCTTGTCCACAAATAGCG +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASSFPLQ*ACPQIA
Trigger: CGCTATTTGTGGACAAGCCCACTGAAGGGGAAAGGA...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGGGCGAGGAGGTCTGTaGTCTCTTCATCGTAGACTC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMGRGGL*SLHRRL
Trigger: GAGTCTACGATGAAGAGACCACAGACCTCCTCGCCC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGACCAGGCACTTGGAATaGTTCCTCTTCGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQTRHLE*FLFALF
Trigger: AAACAAAGCGAAGAGGAACCATTCCAAGTGCCTGGT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCCGGATCCTCCAGGTaGACCAAGCTGCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSGSSR*TKLPVS
Trigger: TGAAACTGGCAGCTTGGTCCACCTGGAGGATCCGGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCTCCGGATCCTCCAGGTaGACCAAGCTGCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLSGSSR*TKLPVS
Trigger: TGAAACTGGCAGCTTGGTCCACCTGGAGGATCCGGA...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTACCTCCATGCCGTTaGGACAGCTCCTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLPPCR*DSSSCC
Trigger: ACAGCAAGAGGAGCTGTCCCAACGGCATGGAGGTAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGGTAGGAAGGCTGGCTaGGTGCAGATGGCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVGRKAG*VQMAGA
Trigger: TGCTCCCGCCATCTGCACCCAGCCAGCCTTCCTACC...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGGTTGGGCCAGAGGCTaGCTTCTCCGGAACACGGGA +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFGWARG*LLRNTG
Trigger: TCCCGTGTTCCGGAGAAGCCAGCCTCTGGCCCAACC...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGCATCAGGTAGCTGTTaGTTGTCGGCTTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPASGSC*LSASQI
Trigger: AATCTGAGAAGCCGACAACCAACAGCTACCTGATGC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATTCATCACTCCCGGCCTaGCTGGGCATAACCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHSSLPA*LGITRG
Trigger: CCCCCTGGTTATGCCCAGCCAGGCCGGGAGTGATGA...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGGGATGCTATCGCTGCTaGAGCTCCGGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQGCYRC*SSGSGW
Trigger: CCAACCTGACCCGGAGCTCCAGCAGCGATAGCATCC...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACACGGGTCAGCCTCACTaGACAGGTCTTCCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNTGQPH*TGLPLR
Trigger: TCTCAACGGAAGACCTGTCCAGTGAGGCTGACCCGT...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCTTGTGCTGCATGTTaGTTAGTTTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEISCAAC*LVSSPP
Trigger: AGGAGGAGAAGAAACTAACCAACATGCAGCACAAGA...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTTCTTGAAGACACGGTaGGAGCGGAGTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHFLKTR*ERSFVS
Trigger: AGACACAAAACTCCGCTCCCACCGTGTCTTCAAGAA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCAGAGCATTATTCCCTaGAACAAGCCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGQSIIP*NKPWSF
Trigger: GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTTACTCAGCAGTGCTTaGGGCTGTCGGGTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHLLSSA*GCRVKS
Trigger: ACTTTTAACCCGACAGCCCCAAGCACTGCTGAGTAA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CGCGTTGGGGCGCGTGATGCTGCGCTTCTGCTTTACATAGTTATATGCTTTTTCGTGGACCTAAGCATCTaGGCTCTCAGCAGGACGATG +
Preference number: 4 (lower is better)
Translates to: RVGARDAALLLYIVICFFVDLSI*ALSRTM
Trigger: CATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCAC...GAAAAAGCATATAACTATGTAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACGCAAGGGCCAAGCTATaGCATATGTTACAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PLEPLPNILPRGGSPGINARAKL*HMLQCK
Trigger: TTTGCACTGTAACATATGCCATAGCTTGGCCCTTGC...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCAGGGTGGAGCAGAATaGGCTTGGACAGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNQGGAE*AWTVQL
Trigger: CAGCTGTACTGTCCAAGCCCATTCTGCTCCACCCTG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAACAATTTCCCACCAATaGAAGGCAACTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLTISHQ*KATPSP
Trigger: TGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGT...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTAACAAAACAAGTGGCTaGGGACAGGGGTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPNKTSG*GQGSFN
Trigger: GTTGAATGACCCCTGTCCCCAGCCACTTGTTTTGTT...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGCACCCAGGGCGGCACTaGTCACAGTTTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWHPGRH*SQFHSR
Trigger: TCTGGAATGAAACTGTGACCAGTGCCGCCCTGGGTG...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAAACCAAACAACTCATaGTGTGGAGCTCCTGATTGG +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQKPNNS*CGAPDW
Trigger: CCAATCAGGAGCTCCACACCATGAGTTGTTTGGTTT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCCTGTGGTCCTTTCTTTaGTGTAACTTGTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEILWSFL*CNLSRF
Trigger: AAACCTGGACAAGTTACACCAAAGAAAGGACCACAG...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGAACAAAATACTTCCTaGCTCTGCAGGCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLEQNTS*LCRHWN
Trigger: ATTCCAGTGCCTGCAGAGCCAGGAAGTATTTTGTTC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATAAACATACAGATTGCTaGGGCCCATCCCACCCCATT +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDKHTDC*GPSHPI
Trigger: AATGGGGTGGGATGGGCCCCAGCAATCTGTATGTTT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCATCCTCTCCTAGGCTaGGAGGTTGCTAATGTAAAT +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGHPLLG*EVANVN
Trigger: ATTTACATTAGCAACCTCCCAGCCTAGGAGAGGATG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTAGGGGCTCCTTTTCATaGCATATCTCATTTACTCCC +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLRGSFS*HISFTP
Trigger: GGGAGTAAATGAGATATGCCATGAAAAGGAGCCCCT...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAAGCAGTGGGTTGGCTaGAGGAAGATGCAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMKQWVG*RKMQKS
Trigger: CGACTTCTGCATCTTCCTTCAGCCAACCCACTGCTT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGATCCTGGCTCATCATaGTGCTTCGGAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMDPGSS*CFGAWL
Trigger: AAGCCAAGCTCCGAAGCATCATGATGAGCCAGGATC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAATGTAATCAACCCCTaGGCCCTGCAGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMNVINP*ALQFLQ
Trigger: CTGGAGGAACTGCAGGGCTCAGGGGTTGATTACATT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACAATGTAATCAACCCCTaGGCCCTGCAGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNNVINP*ALQFLQ
Trigger: CTGGAGGAACTGCAGGGCTCAGGGGTTGATTACATT...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGAGTTGAGCAGGTTTTaGTCGAGCTGGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMELSRF*SSWVGS
Trigger: GCTTCCAACCCAGCTCGATCAAAACCTGCTCAACTC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTTAGGTTCTCCGAGTTaGGCAGGTTTTGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDLGSPS*AGFDRA
Trigger: AGCTCGATCAAAACCTGCTCAACTCGGAGAACCTAA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGCAGAATCACCCTGTaGAAGAACCCTCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSRITL*KNPQVP
Trigger: AGGGACCTGAGGGTTCTTTCACAGGGTGATTCTGCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGCCTGCCTTCTGCAGCTaGATGATGGACTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEPAFCS*MMDSWC
Trigger: GCACCAGGAGTCCATCATTCAGCTGCAGAAGGCAGG...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATAATATCCGCCCAGCCTaGCGCAGCAAAAGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHNIRPA*RSKRRV
Trigger: GACCCGCCTTTTGCTGCGTCAGGCTGGGCGGATATT...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGTACTCCAGCCTAGGTaGCAGAGCCAGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVVLQPR*QSQALS
Trigger: AGACAGGGCCTGGCTCTGTCACCTAGGCTGGAGTAC...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCACTAGGTAAAATATaGACTAGCCTTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEISLGKI*TSLVPA
Trigger: TGCAGGAACAAGGCTAGTTCATATTTTACCTAGTGA...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCTGTGCTTCCAAAAATaGATGGGTAAGTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVLCFQK*MGKFAR
Trigger: TCTGGCAAACTTACCCATTCATTTTTGGAAGCACAG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGGGTGGGAGGATTGCTTaGGGCAGGAGGATCACTTTA +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWGGRIA*GRRITL
Trigger: TAAAGTGATCCTCCTGCCTCAAGCAATCCTCCCACC...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAAATGTGACTCCTCCCTaGCTACACAGCAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASNVTPP*LHSRKQ
Trigger: TTGCTTTCTGCTGTGTAGTCAGGGAGGAGTCACATT...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCAAGTCCAGATGAACTaGACAAAATACTTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQQVQMN*TKYFLA
Trigger: AGCCAGGAAGTATTTTGTTCAGTTCATCTGGACTTG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTTCTTTACCATAAAGTaGATCCCCCTAAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIFFTIK*IPLSSK
Trigger: CTTGGAACTTAGGGGGATTCACTTTATGGTAAAGAA...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGCTGGTCTTGAGCTTCTaGCCTCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWLVLSF*PQVIHL
Trigger: CAGGTGGATCACTTGAGGTCAGAAGCTCAAGACCAG...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGCTGGCCTTGAGGGCTaGTTCCCTGTTGTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMAGLEG*FPVVRR
Trigger: TCTTCTTACAACAGGGAAGCAGCCCTCAAGGCCAGC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTATGTGCATCCTTCCTaGTGTGCTCACGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMYVHPS*CAHAEP
Trigger: GGGTTCAGCGTGAGCACAGCAGGAAGGATGCACATA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACTATGTGCATCCTTCCTaGTGTGCTCACGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNYVHPS*CAHAEP
Trigger: GGGTTCAGCGTGAGCACAGCAGGAAGGATGCACATA...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCAACCCCTGAGCCCTaGAGTTCCTCCAGATTGGAT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSTPEP*SSSRLD
Trigger: ATCCAATCTGGAGGAACTGCAGGGCTCAGGGGTTGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGACTCACGCCCATTTTaGAATGCACCAGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMDSRPF*NAPGTW
Trigger: CCAAGTGCCTGGTGCATTGCAAAATGGGCGTGAGTC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTATGCTTGCATCCAAGATaGCTTCATACTCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLCLHPR*LHTQTA
Trigger: AGCTGTCTGAGTATGAAGGCATCTTGGATGCAAGCA...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGGGTCATCCACAGGCTaGTGGAGGCTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVGSSTG*WRLLSV
Trigger: GACAGACAGCAGCCTCCAGCAGCCTGTGGATGACCC...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTCGATCTTCTTCGCTaGCAGCCTCCAACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMFDLLR*QPPTRC
Trigger: ACAGCGAGTTGGAGGCTGGCAGCGAAGAAGATCGAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGTGTGGATGCTATCGCTaGTGGAGCTCCGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWECGCYR*WSSGSG
Trigger: ACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACA...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCTCCCCTTCTTGTGCTaGATGTTGGTTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHLPFLC*MLVSFF
Trigger: GAAGAAACTAACCAACATGCAGCACAAGAAGGGGAG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCGTGTGCGCCTATGTGTaGACGTTCTTCCTAAAACAT +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCVCAYV*TFFLKH
Trigger: ATGTTTTAGGAAGAACGTGCACACATAGGCGCACAC...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCATCCGAGAGTTTTCTaGGAGGCCAAGAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDHPRVF*EAKNEL
Trigger: TAGCTCATTCTTGGCCTCGCAGAAAACTCTCGGATG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCTTATACTCCCTCACTaGTGCTGGGAAGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNLILPH*CWEELE
Trigger: CTCCAGCTCTTCCCAGCAGCAGTGAGGGAGTATAAG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTGCTTTTCTGCAAGCTaGCTCTCTCTCGAAATGTTT +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGCFSAS*LSLEMF
Trigger: AAACATTTCGAGAGAGAGGCAGCTTGCAGAAAAGCA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGGCTCACGGGGCCACATaGCATAGTTTGCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKAHGAT*HSLLTP
Trigger: AGGGGTCAGCAAACTATGGCATGTGGCCCCGTGAGC...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGGTGAGCAATCTGTATaGTTAAGCAACAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETGEQSV*LSNRVP
Trigger: TGGCACCCTGTTGCTTAAGCATACAGATTGCTCACC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGTCCCCTCGCTGAGTTaGGTGTTTAGAGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEVPSLS*VFRGAL
Trigger: CAGGGCTCCTCTAAACACGCAACTCAGCGAGGGGAC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTTGGTTTGCAATGTCTaGAGGAATCTGGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDLVCNV*RNLGSG
Trigger: CCCACTACCCAGATTCCTGCAGACATTGCAAACCAA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAATAAATTTAGCTGGGTaGAGCAGTGTGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASINLAG*SSVWLW
Trigger: CCAGAGCCACACACTGCTGCACCCAGCTAAATTTAT...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCATCACAGACCACAATaGCCAGTTTGGAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCHHRPQ*PVWRIP
Trigger: TGGAATTCTCCAAACTGGGCATTGTGGTCTGTGATG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCATCTCCAACTCATCTaGTTCCTTGCTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHHLQLI*FLAETT
Trigger: TGTGGTTTCAGCAAGGAAGCAGATGAGTTGGAGATG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAACCAGGCACTTGGAATaGTTCCTCTTCGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLTRHLE*FLFALF
Trigger: AAACAAAGCGAAGAGGAACCATTCCAAGTGCCTGGT...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGCCGCTCCGACCTTTaGGACTCCCAAACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSRSDL*DSQTLV
Trigger: AACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGTAGGCCAATTAGAGTaGGATGGAAGGGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMVGQLE*DGRDGV
Trigger: CACCCCATCCCTTCCATCCCACTCTAATTGGCCTAC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp TTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGTGAGAATTGACCTGCTGGCCAAGTaGGCCACAGGGGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: FFLYYHFCAGRVLITVRIDLLAK*ATGEDV
Trigger: CACGTCCTCCCCTGTGGCCCACTTGGCCAGCAGGTC...AATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCGAAGCCTCAGGTCCTTaGCTGGCTTCATATCTTTCT +
Preference number: 4 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSEASGP*LASYLS
Trigger: AGAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTC...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCAAGATTCACTCAAAGTaGTGTCCTGGGAGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSKIHSK*CPGSQR
Trigger: TCGCTGACTCCCAGGACACCACTTTGAGTGAATCTT...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTTTGGAGGTTGCAGCTaGGTCCCTCGGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFFGGCS*VPRGSL
Trigger: CAGGGAACCCCGAGGGACCCAGCTGCAACCTCCAAA...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCATTCTTGAAGACACGGTaGGAGCGGAGTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASFLKTR*ERSFVS
Trigger: AGACACAAAACTCCGCTCCCACCGTGTCTTCAAGAA...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTTTAGTGCACACCTCTaGCTTTACATTTCCTACTTG +
Preference number: 4 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIFSAHL*LYISYL
Trigger: CAAGTAGGAAATGTAAAGCCAGAGGTGTGCACTAAA...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGATTAGAAGCATCCTGTaGCTTGGCGCGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWIRSIL*LGAVAH
Trigger: ATGAGCCACCGCGCCAAGCCACAGGATGCTTCTAAT...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGATTGTTAGGGTAGTGTaGGTGTTGTCTCCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGIVRVV*VLSPKS
Trigger: GCTTTTTGGAGACAACACCCACACTACCCTAACAAT...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATGGAGGCAAGGATGCGTaGGTGGGTGGTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHGGKDA*VGGVSW
Trigger: CCAGGAAACACCACCCACCCACGCATCCTTGCCTCC...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAGATGCATCTTTGTCTaGCTTCTTTCTACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQRCIFV*LLSTSG
Trigger: CCCAGAAGTAGAAAGAAGCCAGACAAAGATGCATCT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACTCTGTTGCATAAGCTaGAGTGCAGTGGTTCGATCT +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASLCCIS*SAVVRS
Trigger: AGATCGAACCACTGCACTCCAGCTTATGCAACAGAG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp CATCAGAATTCCCAGGGAATCTCAGAAACATACAGATaGCTGGGGCCCATCCCACCCCATTCATGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HQNSQGISETYR*LGPIPPHSWLE
Trigger: TTCCAGCCATGAATGGGGTGGGATGGGCCCCAGCAATCTGTATGTTTCTGAGATTCCCTGGGAATTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp ATAGCATCATCCTCCATGCCGTTGGGACAGCTCCTCTaGCTGTTGTTGTTTAGGTTCTCCGAGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IASSSMPLGQLL*LLLFRFSELSR
Trigger: CCTGCTCAACTCGGAGAACCTAAACAACAACAGCAAGAGGAGCTGTCCCAACGGCATGGAGGATGATGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGGGGAAAAGTTAGGATaGCTTCACTCGTTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETGEKLG*LHSFKG
Trigger: TCCCTTAAACGAGTGAAGTCATCCTAACTTTTCCCC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATGGGGAAAAGTTAGGATaGCTTCACTCGTTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDGEKLG*LHSFKG
Trigger: TCCCTTAAACGAGTGAAGTCATCCTAACTTTTCCCC...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGTTTCGGGGAAGCCGCTaGAATCTCCTTTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKFRGSR*NLLSLP
Trigger: GGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAA...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGTCTGGCGGACCCAGCTaGGGGCAAGATGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVSGGPS*GQDGIV
Trigger: CACAATTCCATCTTGCCCTCAGCTGGGTCCGCCAGA...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCTCACTAGGTAAAATATaGACTAGCCTTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVSLGKI*TSLVPA
Trigger: TGCAGGAACAAGGCTAGTTCATATTTTACCTAGTGA...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATTTTTCACAGACAGCATaGATTCGTCTTTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDFSQTA*IRLCPG
Trigger: ACCTGGGCAAAGACGAATTCATGCTGTCTGTGAAAA...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTTTTGGCATGCCACATaGATTAATGTGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHFWHAT*INVRQK
Trigger: CTTCTGCCTCACATTAATTCATGTGGCATGCCAAAA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTATGCACATGATCACTTaGCTCGGTTTCTATACTCAA +
Preference number: 4 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLMHMIT*LGFYTQ
Trigger: TTGAGTATAGAAACCGAGTCAAGTGATCATGTGCAT...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATAGCAGCTCTGCCTCCTaGGTGTCCAAGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHSSSAS*VSKGEE
Trigger: CTCTTCTCCCTTGGACACTCAGGAGGCAGAGCTGCT...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGCTTCTGACCTCAAGTaGTCCACCTGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEASDLK*STCLGF
Trigger: GAAGCCAAGGCAGGTGGATCACTTGAGGTCAGAAGC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TGTGCTCACGCTGAACCCACCATCTCCATCAAGGTGGATTTTCGTGTCGCTCCAACAGGCTTAAATATGTaGATCCTTCCTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CAHAEPTISIKVDFRVAPTGLNM*ILPAVL
Trigger: GAGCACAGCAGGAAGGATGCACATATTTAAGCCTGT...TGGAGCGACACGAAAATCCACCTTGATGGAGATGGTGGGTTCAGCGTGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCATACTCAGACAGCTaGCTCATAAAGCCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSYSDS*LIKPAL
Trigger: CAACGCGGGCTTTATGAGGCAGCTGTCTGAGTATGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGCCAGGTGGACCAAGCTaGCAGTTTCATCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVPGGPS*QFHPQG
Trigger: CCCCTGAGGATGAAACTGGCAGCTTGGTCCACCTGG...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGTGGGACAGCTCCTCTTaGTGTTGTTGTTTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLEWDSSS*CCCLGS
Trigger: AGAACCTAAACAACAACAGCAAGAGGAGCTGTCCCA...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGTGTGGATGCTATCGCTaGTGGAGCTCCGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVCGCYR*WSSGSG
Trigger: ACCTGACCCGGAGCTCCAGCAGCGATAGCATCCACA...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCTCCCCTTCTTGTGCTaGATGTTGGTTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLELPFLC*MLVSFF
Trigger: GAAGAAACTAACCAACATGCAGCACAAGAAGGGGAG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGTCAGCTCCACACTGCTaGAAACTCTGGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWSAPHC*KLWTSP
Trigger: TGGAGAAGTCCAGAGTTTGCAGCAGTGTGGAGCTGA...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCTTCATTTGGTTTaGAATGTCTGCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQNLHLV*NVCRNL
Trigger: CAGATTCCTGCAGACATTGCAAACCAAATGAAGGTT...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCTCACCAAATACATGTaGCCCATACATTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLELTKYM*PIHFPV
Trigger: GACTGGGAAATGTATGGGGCACATGTATTTGGTGAG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCAAGGGAGATCAAGATaGATCTTTGTCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHQGRSR*IFVWLL
Trigger: AAGAAGCCAGACAAAGATGCATCTTGATCTCCCTTG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGCAGAAGCAGTGGGTTaGCTGAAGGAAGATGCAGAA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMAEAVG*LKEDAE
Trigger: TTCTGCATCTTCCTTCAGCCAACCCACTGCTTCTGC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCCATCTCCATCAAGGTaGATTTTCGTGTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMPSPSR*IFVSLH
Trigger: GTGGAGCGACACGAAAATCCACCTTGATGGAGATGG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCCTTTCCCCTTCAGTaGGCTTGTCCACAAATAGCG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSFPLQ*ACPQIA
Trigger: CGCTATTTGTGGACAAGCCCACTGAAGGGGAAAGGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTTCCGGGGTGCCATCTaGGGTCTCTGGCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFFRGAI*GLWQEV
Trigger: GACTTCTTGCCAGAGACCCCAGATGGCACCCCGGAA...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTAGATGGCGGGAGCATTaGGGTCCTCACATCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIRWREH*GPHIAP
Trigger: GGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCT...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGTGAGAATTTCATCACTCCCGGCCTaGCTGGGCATAACCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FFLYYHFCAGRVLITVRISSLPA*LGITRG
Trigger: CCCCCTGGTTATGCCCAGCCAGGCCGGGAGTGATGA...AATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCAGCTCCGGGTCAGGTTaGAGCTCATGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFSSGSG*SSWKRR
Trigger: CCTCCTCTTCCATGAGCTCCAACCTGACCCGGAGCT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATGAGTTTTGTGTCTCCTaGCCGGCGGCTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHEFCVS*PAAPGS
Trigger: AGAACCAGGAGCCGCCGGCCAGGAGACACAAAACTC...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTCCCTGGAACAAGCCTTaGTCATTCGTGTGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPPWNKP*SFVCFK
Trigger: TTTAAAACACACGAATGACCAAGGCTTGTTCCAGGG...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGTGGACCTAAGCATCTaGGCTCTCAGCAGGACGATG +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEVDLSI*ALSRTM
Trigger: CATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCAC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGCTTTCAGAATTCAGCTaGTCCTTGAAGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLELSEFS*SLKAFW
Trigger: CCAGAAAGCCTTCAAGGACCAGCTGAATTCTGAAAG...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATAAGCATCCTGTGGCTTaGCGCGGTGGCTCATGCCTA +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHKHPVA*RGGSCL
Trigger: TAGGCATGAGCCACCGCGCCAAGCCACAGGATGCTT...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGTGGTGTTTCCTGGGTaGAGCTCTCCTTTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLVVFPG*SSPLER
Trigger: CCTTTCTAAAGGAGAGCTCCACCCAGGAAACACCAC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp AGGTGGGGGTGTAGCAGATGGTCTTCAGAAAGTCTTTaGAGAAACTACTGGTGTGGTCCAGGCGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RWGCSRWSSESL*RNYWCGPGGRR
Trigger: TCTTCTACCGCCTGGACCACACCAGTAGTTTCTCAAAAGACTTTCTGAAGACCATCTGCTACACCCCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCGCAACGCAGAAGGTTaGTCATCACCTGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRNAEG*SSPEDV
Trigger: AACATCTTCAGGTGATGATCAACCTTCTGCGTTGCG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGCTTTGTTTATAAAATaGTACGCTTCATTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGALFIK*YASFQW
Trigger: CCACTGGAATGAAGCGTATCATTTTATAAACAAAGC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTAGGTTCTCCGAGTTaGGCAGGTTTTGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLGSPS*AGFDRA
Trigger: AGCTCGATCAAAACCTGCTCAACTCGGAGAACCTAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTGCGCCTTTCACCATaGAAAAGCTCTCACTTAAGC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLRLSP*KSSHLS
Trigger: GCTTAAGTGAGAGCTTTTTCATGGTGAAAGGCGCAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR TCA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCATATCTTTCTTGGGTaGCGATTCTTCCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: HQVQNASLCSVDGTSALVHIFLG*RFFLYY
Trigger: GTAATAAAGGAAGAATCGTCACCCAAGAAAGATATG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGCTTCCGTTGAGAAGGTaGGACTCCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVLPLRR*DSPAWQ
Trigger: TTGCCAAGCTGGGGAGTCTCACCTTCTCAACGGAAG...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTTATGAAAGAAGAGTATaGTTGTGTGACTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPYERRV*LCDWGM
Trigger: CATTCCCCAGTCACACAATCATACTCTTCTTTCATA...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCCAGACAGAGGAGACTaGGTGAATGTGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHPDRGD*VNVTPP
Trigger: GGGAGGAGTCACATTCACTCAGTCTCCTCTGTCTGG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCAGAGCAAGTCCAGATaGACTGAACAAAATACTTCC +
Preference number: 4 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDQSKSR*TEQNTS
Trigger: GGAAGTATTTTGTTCAGTTCATCTGGACTTGCTCTG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGGCGGGTGGATTACCTaGGGTTGGGAGTTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFGGWIT*GWEFEN
Trigger: GTTCTCAAACTCCCAACCTCAGGTAATCCACCCGCC...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACACAGTGTCTTGAACCATaGCCCTCAGTGATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETQCLEP*PSVICF
Trigger: AAAACAAATCACTGAGGGTCATGGTTCAAGACACTG...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAAAGAGGTTCGTGGCTaGAGTGCTCACATCTCTAAC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMKEVRG*SAHISN
Trigger: GTTAGAGATGTGAGCACTGCAGCCACGAACCTCTTT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR GCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGAACCATCCCAATGGTaGAGCTTTTACTTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETEPSQW*SFYFPY
Trigger: GTAAGGAAAGTAAAAGCTGCACCATTGGGATGGTTC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TCGGAGAACCATCCCAATGGTGCAGCTTTTACTTTCCTTACTGGAAAAGTCCACTATGTGCATCCTTCCTaGTGTGCTCACGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: SENHPNGAAFTFLTGKVHYVHPS*CAHAEP
Trigger: GGGTTCAGCGTGAGCACAGCAGGAAGGATGCACATA...GTGGACTTTTCCAGTAAGGAAAGTAAAAGCTGCACCATTGGGATGGTTCTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTCCTCCAGATTGGATaGATTCCATTCAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMFLQIG*IPFRAE
Trigger: CTCGGCTCTGAATGGAATGCATCCAATCTGGAGGAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGGACTCACGCCCATTTTaGAATGCACCAGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKDSRPF*NAPGTW
Trigger: CCAAGTGCCTGGTGCATTGCAAAATGGGCGTGAGTC...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGCTTGCGGACCAAGCCTaGCTTCTGCAGCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWELADQA*LLQLND
Trigger: ATCATTCAGCTGCAGAAGGCAGGCTTGGTCCGCAAG...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCATGCTTTTCTGCAAGCTaGCTCTCTCTCGAAATGTTT +
Preference number: 4 (lower is better)
Translates to: LAPTISHQWKATPSPDASCFSAS*LSLEMF
Trigger: AAACATTTCGAGAGAGAGGCAGCTTGCAGAAAAGCA...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGCAGAATGCTTCACTCTaGTCTGTGGACGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVQNASL*SVDGTS
Trigger: GCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTG...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTGGCATATGTTACAGTaGAAACTTCCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGWHMLQ*KLPFHR
Trigger: TCTGTGAAAAGGAAGTTTGCACTGTAACATATGCCA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCCAAGGAGAAGGGCTTaGCACCCAGCAGAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFPRRRA*HPAESY
Trigger: ATAGCTCTCTGCTGGGTGGCAAGCCCTTCTCCTTGG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGAAATGGAAGCAGCTCTaGCTCCTGAGTGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEKWKQL*LLSVQG
Trigger: CCCTTGGACACTCAGGAGGCAGAGCTGCTTCCATTT...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGCTGAGGTGGGAGGATTaGTTGAGGCAGGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVLRWED*LRQEDH
Trigger: GTGATCCTCCTGCCTCAAGCAATCCTCCCACCTCAG...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCTGCCCTCTAAGCATTaGACACATGCATTAGGGACT +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLLPSKH*THALGT
Trigger: AGTCCCTAATGCATGTGTGCAATGCTTAGAGGGCAG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCTGTTGAGCATCTACTaGCCTCTAAGCATTGCACAC +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNLLSIY*PLSIAH
Trigger: GTGTGCAATGCTTAGAGGGCAGTAGATGCTCAACAG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGAGCCGCTCCGACCTTTaGGACTCCCAAACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWESRSDL*DSQTLV
Trigger: AACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCT...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGCTTTTGAGAAACTACTaGTGTGGTCCAGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWLLRNY*CGPGGR
Trigger: TCTACCGCCTGGACCACACCAGTAGTTTCTCAAAAG...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGTTTCCCTGATGGTTTaGAGGTTGCAGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVVSLMV*RLQLGP
Trigger: GGGACCCAGCTGCAACCTCCAAACCATCAGGGAAAC...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGTTTCATTGGCTCCTATaGGACACAGCATGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWFHWLL*DTAWAN
Trigger: ATTGGCCCATGCTGTGTCCCATAGGAGCCAATGAAA...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGAGGACCACCCACAGGTaGGCCTGTTCTTGCTTACTG +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVRTTHR*ACSCLL
Trigger: CAGTAAGCAAGAACAGGCCCACCTGTGGGTGGTCCT...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCCACAATGCCCAGTTTaGAGAATTCCAGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNPQCPV*RIPGDS
Trigger: AGAATCCCCTGGAATTCTCCAAACTGGGCATTGTGG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTGCGCCTTTCACCATaGAAAAGCTCTCACTTAAGT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLRLSP*KSSHLS
Trigger: ACTTAAGTGAGAGCTTTTTCATGGTGAAAGGCGCAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR TCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTAGCTCTGCTCGGAGCTaGTGCAGCTCTCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVISSARS*CSSHSR
Trigger: CCTACTATGAGAGCTGCATCAGCTCCGAGCAGAGCT...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGATAAGGTACATGGGGTaGAGATGGTGTGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMIRYMG*RWCAEI
Trigger: TATCTCTGCACACCATCTTCACCCCATGTACCTTAT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTACATATCTTTCTTGGGTaGCGATTCTTCCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLHIFLG*RFFLYY
Trigger: GTAATAAAGGAAGAATCGTCACCCAAGAAAGATATG...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGTCTCAGATTCATTACTaGACAGAAGCCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWSQIHY*TEASGP
Trigger: AGGACCTGAGGCTTCTGTTCAGTAATGAATCTGAGA...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGAGGGAGGGATCATATaGAAATATCCGCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVEGGII*KYPPSL
Trigger: CAGGCTGGGCGGATATTTTCATATGATCCCTCCCTC...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGAAACATGGTTCTTCTTaGAGACACGGTGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQKHGSS*RHGGSG
Trigger: TCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTT...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGAATTCAGCTGGTCCTTaGAGGCTTTCTGGTTTCACT +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWNSAGP*RLSGFT
Trigger: AGTGAAACCAGAAAGCCTTCAAGGACCAGCTGAATT...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACCTACCACATGAAATTTaGTTTGGCAAAACATACCGA +
Preference number: 4 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHLPHEI*FGKTYR
Trigger: TCGGTATGTTTTGCCAAATCAAATTTCATGTGGTAG...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTATGTATCAATGCAAGGTaGAGATGTAGAAAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLCINAR*RCRKVQ
Trigger: CTGAACTTTTCTACATCTTCACCTTGCATTGATACA...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCTCCAGATGCCTCAGGTaGGATGACTTAATAGGATCT +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLSRCLR*DDLIGS
Trigger: AGATCCTATTAAGTCATCTCACCTGAGGCATCTGGA...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGTCCAGATCGTTAAGGTaGTTTGCTCTGTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWESRSLR*FALWLR
Trigger: CCTGAGCCACAGAGCAAATCACCTTAACGATCTGGA...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGTAATTAGCAAAGCGTaGGCCTACTCAGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLVISKA*AYSVAS
Trigger: TGATGCAACTGAGTAGGCTCACGCTTTGCTAATTAC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGACAGGCTTAAATATGTaGATCCTTCCTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMTGLNM*ILPAVL
Trigger: GAGCACAGCAGGAAGGATGCACATATTTAAGCCTGT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACACAGGCTTAAATATGTaGATCCTTCCTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNTGLNM*ILPAVL
Trigger: GAGCACAGCAGGAAGGATGCACATATTTAAGCCTGT...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATTCAACCCCTGAGCCCTaGAGTTCCTCCAGATTGGAT +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHSTPEP*SSSRLD
Trigger: ATCCAATCTGGAGGAACTGCAGGGCTCAGGGGTTGA...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGCTTGCATCCAAGATaGCTTCATACTCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMCLHPR*LHTQTA
Trigger: AGCTGTCTGAGTATGAAGGCATCTTGGATGCAAGCA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGGGACAGCTCCTCTTaGTGTTGTTGTTTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMWDSSS*CCCLGS
Trigger: AGAACCTAAACAACAACAGCAAGAGGAGCTGTCCCA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGGGGTGAAGATGGTGTaGAGAGATATGTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMGVKMV*RDMCYS
Trigger: GGAATAACACATATCTCTGCACACCATCTTCACCCC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGACTCTTCTGCAGGATaGGAAGGGAACAGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEDSSAG*EGNSLD
Trigger: ATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGAGAAGGGGATTTGCATaGATTATCAGTGAATTCACC +
Preference number: 4 (lower is better)
Translates to: SCVSAADTQQCRWALPLERRGFA*IISEFT
Trigger: GGTGAATTCACTGATAATGCATGCAAATCCCCTTCT...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGTGGTGGGGTAGAAATTaGATGAATTTGGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWWWGRN*MNLESG
Trigger: GCCTGACTCCAAATTCATGCAATTTCTACCCCACCA...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGCAAATGGCTCTTGTaGAACTCTTGTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSKWLL*NSCLPL
Trigger: CAGAGGAAGACAAGAGTTCCACAAGAGCCATTTGCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGACCAGGCACTTGGAATaGTTCCTCTTCGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMTRHLE*FLFALF
Trigger: AAACAAAGCGAAGAGGAACCATTCCAAGTGCCTGGT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTTTCCCACGGACACTGTaGATGCTATCGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIFPRTL*MLSLLE
Trigger: CTCCAGCAGCGATAGCATCCACAGTGTCCGTGGGAA...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGAGGCTATGCTTTTGTTaGCTGAGGGAAAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWERLCFC*LRERGN
Trigger: GTTCCCCCTTTCCCTCAGCCAACAAAAGCATAGCCT...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCGACAGGAAGGACAGTaGAGGACTGGTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHRQEGQ*RTGDLL
Trigger: AAGCAGATCACCAGTCCTCCACTGTCCTTCCTGTCG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGTTCACGGGAACCCACTaGCAGCTTCTGGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEFTGTH*QLLENQ
Trigger: TTGGTTTTCCAGAAGCTGCCAGTGGGTTCCCGTGAA...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTGAGGCAGGATTGCTaGAGCCCAGGAGATCAACAC +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVILRQDC*SPGDQH
Trigger: GTGTTGATCTCCTGGGCTCCAGCAATCCTGCCTCAG...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCACCCCATTCATGGCTaGAACCCAAAGAGAATTTGT +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNHPIHG*NPKRIC
Trigger: ACAAATTCTCTTTGGGTTCCAGCCATGAATGGGGTG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCTTCAGAAAGTCTTTTaGGAAACTACTGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNLQKVF*ETTGVV
Trigger: GACCACACCAGTAGTTTCTCAAAAGACTTTCTGAAG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGTGGGCCCTTCCCCTTaGGATTTAAACTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEVGPSP*DLNFSI
Trigger: AATGCTGAAGTTTAAATCTCAAGGGGAAGGGCCCAC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTCAGAACCACCACCTaGGCCAGACACTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVILRTTT*ARHLSN
Trigger: ATTGCTCAAGTGTCTGGCTCAGGTGGTGGTTCTGAG...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGAGGTGTCCCGACACCTaGCAGAATGCTCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVRCPDT*QNAHLV
Trigger: AACAAGATGAGCATTCTGTCAGGTGTCGGGACACCT...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGCATCTGCTTCCTTGCTaGAACCACAAGGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEHLLPC*NHKGDQ
Trigger: TTGATCTCCCTTGTGGTTTCAGCAAGGAAGCAGATG...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGAACCATCCCAATGGTaGAGCTTTTACTTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMEPSQW*SFYFPY
Trigger: GTAAGGAAAGTAAAAGCTGCACCATTGGGATGGTTC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR GCA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTATTCTGCATCTTCTACTaGAAATTCACAGTACAAAAG +
Preference number: 4 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLFCIFY*KFTVQK
Trigger: CTTTTGTACTGTGAATTTGCAGTAGAAGATGCAGAA...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACATCCAAAAAGCATGTGTaGAATGTAATTAGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: RKDSGGLVICLSGLLSETSKKHV*NVISKA
Trigger: CGCTTTGCTAATTACATTGCACACATGCTTTTTGGA...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTACCCGAAAAGCAAATaGCTCTTGTGGAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMYPKSK*LLWNSC
Trigger: ACAAGAGTTCCACAAGAGCCATTTGCTTTTCGGGTA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCCATCTCCATCAAGGTaGATTTTCGTGTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHPSPSR*IFVSLH
Trigger: GTGGAGCGACACGAAAATCCACCTTGATGGAGATGG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGACATTTTCTAGATCCTaGCTCATCATGATGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMTFSRS*LIMMLR
Trigger: CCGAAGCATCATGATGAGCCAGGATCTAGAAAATGT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAAAAAGAAATTGAGTTaGAAGCCCTGCCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMKKKLS*KPCPGY
Trigger: ATACCCTGGGCAGGGCTTCCAACTCAATTTCTTTTT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGCTTTGGCAGGACTTTTaGGGTCTCTCTGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVLWQDF*GLSGRF
Trigger: GAACCTTCCAGAGAGACCCCAAAAGTCCTGCCAAAG...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCTCTAGCAAGGCTCCTTaGAATAGATGTGAACACACA +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLSSKAP*NRCEHT
Trigger: TGTGTGTTCACATCTATTCCAAGGAGCCTTGCTAGA...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGTTCACCATGTTACCTaGGCTGGTCTTGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVVHHVT*AGLELL
Trigger: CAGGAGTTCAAGACCAGCCCAGGTAACATGGTGAAC...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCTTGGGGAGAAGATGGTaGGGTAGAAATTGCATGAAT +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLLGRRW*GRNCMN
Trigger: ATTCATGCAATTTCTACCCCACCATCTTCTCCCCAA...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTaGAAGACACGGTGGGAGCGGAGTTTTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFF*KTRWERSFVSP
Trigger: AGGAGACACAAAACTCCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATTTAGGTTCTCCGAGTTaGGCAGGTTTTGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHLGSPS*AGFDRA
Trigger: AGCTCGATCAAAACCTGCTCAACTCGGAGAACCTAA...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGTTTTCACAGACAGCATaGATTCGTCTTTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQFSQTA*IRLCPG
Trigger: ACCTGGGCAAAGACGAATTCATGCTGTCTGTGAAAA...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGGTGGGAGGATCACTTaGAGACAGGAATTAAAGACC +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFGGRIT*RQELKT
Trigger: GGTCTTTAATTCCTGTCTTCAAGTGATCCTCCCACC...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGTACCTACATTTTGTTaGAAAAGAGCTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLVPTFC*KRAQDT
Trigger: AGTGTCCTGAGCTCTTTTGCAACAAAATGTAGGTAC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTAAGTAATTTGAGCTaGAAACCTCTGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLSNLS*KPLDSR
Trigger: TCTGCTGTCCAGAGGTTTCCAGCTCAAATTACTTAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCAAGATTCACTCAAAGTaGTGTCCTGGGAGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFKIHSK*CPGSQR
Trigger: TCGCTGACTCCCAGGACACCACTTTGAGTGAATCTT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCAGCTGAGGGCAAGATaGAATTGTGGAAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHQLRAR*NCGRAS
Trigger: TGAAGCTCTTCCACAATTCCATCTTGCCCTCAGCTG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGCTTTCAGAATTCAGCTaGTCCTTGAAGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQLSEFS*SLKAFW
Trigger: CCAGAAAGCCTTCAAGGACCAGCTGAATTCTGAAAG...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGGCAAGGGCCAAGCTATaGCATATGTTACAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKARAKL*HMLQCK
Trigger: TTTGCACTGTAACATATGCCATAGCTTGGCCCTTGC...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCATGTCTGCAGGAATCTaGGTAGTGGGACCAAGACAA +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFMSAGI*VVGPRQ
Trigger: TTGTCTTGGTCCCACTACCCAGATTCCTGCAGACAT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCCCACTGGCAGCTTCTaGAAAACCAAACAACTCATG +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFPTGSF*KTKQLM
Trigger: CATGAGTTGTTTGGTTTTCCAGAAGCTGCCAGTGGG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATATCCCACCCCATTCATaGCTGGAACCCAAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHIPPHS*LEPKEN
Trigger: ATTCTCTTTGGGTTCCAGCCATGAATGGGGTGGGAT...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp TTCTTTAGTGCACACCTCTGGCTTTACATTTCCTACTaGTACGGGAAGAGAACCCACCCAAAGTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: FFSAHLWLYISY*YGKRTHPKSKS
Trigger: GGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAAATGTAAAGCCAGAGGTGTGCACTAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp ATCCCACCCCATTCATGGCTGGAACCCAAAGAGAATTaGTTAGCTATCTTCAACCTTGCCAGAGAACAGTGT +
Preference number: 4 (lower is better)
Translates to: IPPHSWLEPKEN*LAIFNLAREQC
Trigger: ACACTGTTCTCTGGCAAGGTTGAAGATAGCTAACAAATTCTCTTTGGGTTCCAGCCATGAATGGGGTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp CATATCTCATTTACTCCCTCACTCTCTCAGCATCTGTaGAGCATCTACTGCCCTCTAAGCATTGCACACATG +
Preference number: 4 (lower is better)
Translates to: HISFTPSLSQHL*SIYCPLSIAHM
Trigger: CATGTGTGCAATGCTTAGAGGGCAGTAGATGCTCAACAGATGCTGAGAGAGTGAGGGAGTAAATGAGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp AGAAGCCTCAGGTCCTTGGCTGGCTTCATATCTTTCTaGGGTGACGATTCTTCCTTTATTACCACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RSLRSLAGFISF*GDDSSFITTSV
Trigger: CACAGAAGTGGTAATAAAGGAAGAATCGTCACCCAAGAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGCTTTGTTTATAAAATaGTACGCTTCATTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMALFIK*YASFQW
Trigger: CCACTGGAATGAAGCGTATCATTTTATAAACAAAGC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR TCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACGCTTTGTTTATAAAATaGTACGCTTCATTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNALFIK*YASFQW
Trigger: CCACTGGAATGAAGCGTATCATTTTATAAACAAAGC...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACAGCATTAGCAACAACTaGGAACAACCCATACATTTT +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNSISNN*EQPIHF
Trigger: AAAATGTATGGGTTGTTCTCAGTTGTTGCTAATGCT...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGTGAGAATTAGGTGTCCCGACACCTaGCAGAATGCTCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: FFLYYHFCAGRVLITVRIRCPDT*QNAHLV
Trigger: AACAAGATGAGCATTCTGTCAGGTGTCGGGACACCT...AATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTGTGTCTGGATGCACATaGTCACTTGACTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIVSGCT*SLDSVS
Trigger: AGAAACCGAGTCAAGTGATCATGTGCATCCAGACAC...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGATTGTCCTAGGGCCTTaGACAAATAAGTATCGGATG +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEIVLGP*TNKYRM
Trigger: CATCCGATACTTATTTGTTCAAGGCCCTAGGACAAT...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp GATTCTGTCTTCGCAACGCAGAAGGTTGATCATCACCTGAAGATGTTGAGGCAGTTGAGGCAGATCACCTaGGGTTTAATTTTCGATCTT +
Preference number: 4 (lower is better)
Translates to: DSVFATQKVDHHLKMLRQLRQIT*GLIFDL
Trigger: AAGATCGAAAATTAAACCTCAGGTGATCTGCCTCAA...CTGCCTCAACATCTTCAGGTGATGATCAACCTTCTGCGTTGCGAAGACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR GCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCATCCGAGAGTTTTCTaGGAGGCCAAGAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIHPRVF*EAKNEL
Trigger: TAGCTCATTCTTGGCCTCGCAGAAAACTCTCGGATG...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCCTTCTAGAATGGACTaGCCTCAGATAAGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFPSRMD*PQIRVH
Trigger: ATGCACTCTTATCTGAGGGCAGTCCATTCTAGAAGG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp CTGCATCAGGTAGCTGTTGGTTGTCGGCTTCTCAGATTCATTACTGAACAGAAGTCTTGTGCTGCATGTTaGTTAGTTTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LHQVAVGCRLLRFITEQKSCAAC*LVSSPP
Trigger: AGGAGGAGAAGAAACTAACCAACATGCAGCACAAGA...CTTCTGTTCAGTAATGAATCTGAGAAGCCGACAACCAACAGCTACCTGATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCAGAGCATTATTCCCTaGAACAAGCCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFQSIIP*NKPWSF
Trigger: GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTGGCAAGATGGAATTGTaGAAGAGCTTCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIGKMEL*KSFSQL
Trigger: CAGTTGGCTGAAGCTCTTCCACAATTCCATCTTGCC...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGGCAGAATTTTAAGATaGAAGTTGAGGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEGRILR*KLRWLT
Trigger: TGTGAGCCACCTCAACTTCCATCTTAAAATTCTGCC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACGGAGCAGTTCCTATCTaGCTTCATCAATTTTTAGAT +
Preference number: 4 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNGAVPI*LHQFLD
Trigger: ATCTAAAAATTGATGAAGCCAGATAGGAACTGCTCC...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp GCCACTTATGTTTGGAATTTTCCCCATCAGCTAAGGTaGCATACAAAGCAAGGGCCAAGCTATGGCATATGT +
Preference number: 4 (lower is better)
Translates to: ATYVWNFPHQLR*HTKQGPSYGIC
Trigger: ACATATGCCATAGCTTGGCCCTTGCTTTGTATGCAACCTTAGCTGATGGGGAAAATTCCAAACATAAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CAA 72 bp TTCTCAGATTCATTACTGAACAGAAGCCTCAGGTCCTaGGCTGGCTTCATATCTTTCTTGGGTGACGATTCT +
Preference number: 4 (lower is better)
Translates to: FSDSLLNRSLRS*AGFISFLGDDS
Trigger: AGAATCGTCACCCAAGAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTCTGTTCAGTAATGAATCTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR TCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCTGTGCTTCCAAAAATaGATGGGTAAGTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHLCFQK*MGKFAR
Trigger: TCTGGCAAACTTACCCATTCATTTTTGGAAGCACAG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCAATGCTGACCACTACTaGCAAGACCAAGTATCCAAT +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFNADHY*QDQVSN
Trigger: ATTGGATACTTGGTCTTGTCAGTAGTGGTCAGCATT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR TCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTTGTTTTGGCAAGGGCTaGGGAAGCAGTTTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVICFGKG*GSSFLL
Trigger: TAAAAGGAAACTGCTTCCTCAGCCCTTGCCAAAACA...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATTTATTACCACTTCTGTaGTGGGAGGGTTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHLLPLL*WEGSYH
Trigger: GTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAA...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGACACCTGACAGAATaGTCATCTTGTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIRHLTE*SSCSYS
Trigger: GCTGTATGAACAAGATGAGCATTCTGTCAGGTGTCG...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCACACAGGCATTCCACTaGAGAGCAGATGATAACAAA +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFTQAFH*RADDNK
Trigger: TTTGTTATCATCTGCTCTGCAGTGGAATGCCTGTGT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR GCA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGGTGAGCAATCTGGTCTaGTTGATGATTATAATTCTT +
Preference number: 4 (lower is better)
Translates to: FLLVREENPPKVQILSWWVSNLV*LMIIIL
Trigger: AAGAATTATAATCATCAAGCAGACCAGATTGCTCAC...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATACATTTTCTAGATCCTaGCTCATCATGATGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHTFSRS*LIMMLR
Trigger: CCGAAGCATCATGATGAGCCAGGATCTAGAAAATGT...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCACATTTTCTAGATCCTaGCTCATCATGATGCTTCGG +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFTFSRS*LIMMLR
Trigger: CCGAAGCATCATGATGAGCCAGGATCTAGAAAATGT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATAAGGAGACAAAGTCCTaGAGGGAGGATTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHKETKS*REDFCK
Trigger: TTTGCAAAAATCCTCCCTCCAGGACTTTGTCTCCTT...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGCAGGATAAACACGTATaGAGTAGGACAAGCTCACAA +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVQDKHV*SRTSSQ
Trigger: TTGTGAGCTTGTCCTACTCCATACGTGTTTATCCTG...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
3UTR CAA 72 bp TATGCTAGCTGTGCTTCCAAAAATGAATGGGTAAGTTaGCCAGAAGCCAAAGACCAACTTGTACTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: YASCASKNEWVS*PEAKDQLVLSR
Trigger: TCTGGAGAGTACAAGTTGGTCTTTGGCTTCTGGCAAACTTACCCATTCATTTTTGGAAGCACAGCTAGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
3UTR CAA 72 bp TCAGGTGACACAGTGTGTCTGGATGCACATGATCACTaGACTCGGTTTCTATACTCAAATATACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SGDTVCLDAHDH*TRFLYSNIQMQ
Trigger: CTGCATCTGTATATTTGAGTATAGAAACCGAGTCAAGTGATCATGTGCATCCAGACACACTGTGTCACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTAAGGAGACAAAGTCCTaGAGGGAGGATTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIKETKS*REDFCK
Trigger: TTTGCAAAAATCCTCCCTCCAGGACTTTGTCTCCTT...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGTGAGAATTTTATTACCACTTCTGTaGTGGGAGGGTTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: FFLYYHFCAGRVLITVRILLPLL*WEGSYH
Trigger: GTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAA...AATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR GCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTGGCATATGTTACAGTaGAAACTTCCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFWHMLQ*KLPFHR
Trigger: TCTGTGAAAAGGAAGTTTGCACTGTAACATATGCCA...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTTTAGATTACTGGAATaGTCTTTAGCTGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFFRLLE*SLAEED
Trigger: GTCCTCTTCAGCTAAAGAGCATTCCAGTAATCTAAA...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGGCTTCATATCTTTCTTaGGTGACGATTCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVASYLS*VTILPL
Trigger: TAAAGGAAGAATCGTCACCCAAGAAAGATATGAAGC...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTTCAACAACCTTCATTTaGTTTGCAATGTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVISTTFI*FAMSAG
Trigger: TCCTGCAGACATTGCAAACCAAATGAAGGTTGTTGA...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTGCTTCATATCTTTCTTaGGTGACGATTCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIASYLS*VTILPL
Trigger: TAAAGGAAGAATCGTCACCCAAGAAAGATATGAAGC...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CCA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTACATGCAACTGATCTaGGTTTCCAAAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFYMQLI*VSKNKP
Trigger: AGGTTTATTTTTGGAAACCCAGATCAGTTGCATGTA...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR GCA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTACTCAAATATACAGATaGAGAGTGAACTCAAACACA +
Preference number: 4 (lower is better)
Translates to: LEKRFQTEHYSLEQALVITQIYR*RVNSNT
Trigger: TGTGTTTGAGTTCACTCTGCATCTGTATATTTGAGT...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS GCA 90 bp GGCGCTGGGCGTGGGCGAGCGCTGCAGGGTCACCAGGGCCATGGCTaGGGCGCGGTGCGAGGGCGCCACAGACGTCTCGAGCTAGAGCCG +
Preference number: 5 (lower is better)
Translates to: GAGRGRALQGHQGHG*GAVRGRHRRLELEP
Trigger: CGGCTCTAGCTCGAGACGTCTGTGGCGCCCTCGCACCGCGCCGCAGCCATGGCCCTGGTGACCCTGCAGCGCTCGCCCACGCCCAGCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000551165.5
CDS CCA 90 bp AGGCGGCGCTGGGCGTGGGCGAGCGCTGCAGGGTCACCAGGGCCATaGCTGCGGCGCGGTGCGAGGGCGCCACAGACGTCTCGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: RRRWAWASAAGSPGP*LRRGARAPQTSRAR
Trigger: TCTAGCTCGAGACGTCTGTGGCGCCCTCGCACCGCGCCGCAGCCATGGCCCTGGTGACCCTGCAGCGCTCGCCCACGCCCAGCGCCGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000551165.5
CDS GCA 90 bp GCAGTGTGGGCTGACCGCACGCCCACTCTACAGCAGGGAGGCAGCTaGCCAGGGCTGGTGCTCTGCTGGCGGAGGCCACATGTGTACTTG +
Preference number: 5 (lower is better)
Translates to: AVWADRTPTLQQGGS*PGLVLCWRRPHVYL
Trigger: CAAGTACACATGTGGCCTCCGCCAGCAGAGCACCAGCCCTGGGCAGCTGCCTCCCTGCTGTAGAGTGGGCGTGCGGTCAGCCCACACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS-3UTR CAA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCAGGTGGGAGCGGAGTTTaGTGTCTCCTGGCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: WVQMAGALGSSHRSLEASGGSGV*CLLAGG
Trigger: GCCGCCGGCCAGGAGACACAAAACTCCGCTCCCACC...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS GCA 90 bp CACCATGTACCGGACCCGGTCCGCCCAGGCGCTCTCCAGGCGCACTaGCTGGAACAGGGCAGACATGCTCTCACTAACCTGCCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: HHVPDPVRPGALQAH*LEQGRHALTNLPLE
Trigger: CTCCAAAGGCAGGTTAGTGAGAGCATGTCTGCCCTGTTCCAGGCAGTGCGCCTGGAGAGCGCCTGGGCGGACCGGGTCCGGTACATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS CCA 90 bp ATGTACCGGACCCGGTCCGCCCAGGCGCTCTCCAGGCGCACTGCCTaGAACAGGGCAGACATGCTCTCACTAACCTGCCTTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: MYRTRSAQALSRRTA*NRADMLSLTCLWRW
Trigger: CCACCTCCAAAGGCAGGTTAGTGAGAGCATGTCTGCCCTGTTCCAGGCAGTGCGCCTGGAGAGCGCCTGGGCGGACCGGGTCCGGTACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS-3UTR CAA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGACAGAGTCCGGAACCTaGCTGGGGCTGTCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSTESGT*LGLSGR
Trigger: CCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGT...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGCTGATGGTTTGGAGGTaGCAGCTGGGTCCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLLMVWR*QLGPSG
Trigger: CCCCGAGGGACCCAGCTGCAACCTCCAAACCATCAG...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS TCA 90 bp CAACTCCGTAAGTGCTCAGCTGAGGCTTTTGGGTGCAGTGTGGGCTaGCCGCACGCCCACTCTACAGCAGGGAGGCAGCTGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QLRKCSAEAFGCSVG*PHAHSTAGRQLPRA
Trigger: AGCCCTGGGCAGCTGCCTCCCTGCTGTAGAGTGGGCGTGCGGTCAGCCCACACTGCACCCAAAAGCCTCAGCTGAGCACTTACGGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS GCA 90 bp AGTGGGATGGAAGGGATGGGGTGTGCCACCCTGCAGGCCGGGCTCTaGCTACCTCCATGCCGTTGGGACAGCTCCTCTTGCTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: SGMEGMGCATLQAGL*LPPCRWDSSSCCCC
Trigger: ACAACAACAGCAAGAGGAGCTGTCCCAACGGCATGGAGGTAGGCAGAGCCCGGCCTGCAGGGTGGCACACCCCATCCCTTCCATCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS CCA 90 bp GGACACAACTCCGTAAGTGCTCAGCTGAGGCTTTTGGGTGCAGTGTaGGCTGACCGCACGCCCACTCTACAGCAGGGAGGCAGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: GHNSVSAQLRLLGAV*ADRTPTLQQGGSCP
Trigger: TGGGCAGCTGCCTCCCTGCTGTAGAGTGGGCGTGCGGTCAGCCCACACTGCACCCAAAAGCCTCAGCTGAGCACTTACGGAGTTGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS-3UTR CAA 90 bp GATGAGAGCTACACCCCCGGGGAAGTAGTTGTGCCTCCGGGCCACTTCGCAGGCATGGCGTTCCACTCGTaGATGCAGCTCTGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: DESYTPGEVVVPPGHFAGMAFHS*MQLCSE
Trigger: CTCCGAGCAGAGCTGCATCAACGAGTGGAACGCCAT...GCCTGCGAAGTGGCCCGGAGGCACAACTACTTCCCCGGGGGTGTAGCTCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR CAA 90 bp TGGGTGCAGATGGCGGGAGCATTGGGGTCCTCACATCGCTCCCTGGAGGCCTCAAGCTCTTTGGTGTGCTaGCGGACCAAGCCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: WVQMAGALGSSHRSLEASSSLVC*RTKPAF
Trigger: GAAGGCAGGCTTGGTCCGCAAGCACACCAAAGAGCT...TGAGGCCTCCAGGGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCGAGCTCCGGGTCAGGTaGGAGCTCATGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVELRVR*ELMEEE
Trigger: CTCCTCTTCCATGAGCTCCAACCTGACCCGGAGCTC...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCGTGAGACTCCCCAGCTaGGCAAGAGAGTGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVVRLPS*ARECER
Trigger: GCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCAC...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGGTGGGAGCGGAGTTTaGTGTCTCCTGGCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLGGSGV*CLLAGG
Trigger: GCCGCCGGCCAGGAGACACAAAACTCCGCTCCCACC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS GCA 90 bp CTCTGGCCATCTGCTCCCTATGGAGATCAGGAAAAGCCAGGAGGCTaGCGAGTGCTTCCACGAGGGCTGGGGAGCCAACTCCTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: LWPSAPYGDQEKPGG*RVLPRGLGSQLLLR
Trigger: TCTGAGGAGGAGTTGGCTCCCCAGCCCTCGTGGAAGCACTCGGCAGCCTCCTGGCTTTTCCTGATCTCCATAGGGAGCAGATGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS CCA 90 bp GTGCCTGTAGTCCCTACTACAGAGGCTGAGGTAGGCCAATTAGAGTaGGATGGAAGGGATGGGGTGTGCCACCCTGCAGGCCGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VPVVPTTEAEVGQLE*DGRDGVCHPAGRAL
Trigger: CAGAGCCCGGCCTGCAGGGTGGCACACCCCATCCCTTCCATCCCACTCTAATTGGCCTACCTCAGCCTCTGTAGTAGGGACTACAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGCCTCCAACTCGCTGTaGCTGGCCGAGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPASNSL*LAEEEA
Trigger: CGCCTCCTCCTCGGCCAGCAACAGCGAGTTGGAGGC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp GAAGGAAGATTCACTCAAAGTGGTGTCCTGGGAGTCAGCGACGGTGGACGGGTCACGGGGGAGGTTCGGTaGGGCCAGAGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: EGRFTQSGVLGVSDGGRVTGEVR*GQRLAS
Trigger: AGAAGCCAGCCTCTGGCCCAACCGAACCTCCCCCGT...GACCCGTCCACCGTCGCTGACTCCCAGGACACCACTTTGAGTGAATCTTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGAGCTTGCTGACACCTTaGATTCAAGCCTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLSLLTP*IQAWRS
Trigger: GCTGCGCCAGGCTTGAATCAAAGGTGTCAGCAAGCT...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp TCCCAGCAAGATATTCTCCTCGGTGTCCTGGCGCCCGCTGCTGTACACCACCACAGGCGCACTGCCAGCTaGATTCTGTCTTCGCAACGC +
Preference number: 5 (lower is better)
Translates to: SQQDILLGVLAPAAVHHHRRTAS*ILSSQR
Trigger: GCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCCT...GTGGTGGTGTACAGCAGCGGGCGCCAGGACACCGAGGAGAATATCTTGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR CAA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGCGACTCACGCCCATTTaGCAATGCACCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSRLTPI*QCTRHL
Trigger: CAAGTGCCTGGTGCATTGCAAAATGGGCGTGAGTCG...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTACAGAGTCCGGAACCTaGCTGGGGCTGTCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPTESGT*LGLSGR
Trigger: CCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGT...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCAGATGGCGGGAGCATaGGGGTCCTCACATCGCTCC +
Preference number: 5 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGQMAGA*GSSHRS
Trigger: GGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACGGGGGAGGTTCGGTaGGGCCAGAGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCTGEVR*GQRLAS
Trigger: AGAAGCCAGCCTCTGGCCCAACCGAACCTCCCCCGT...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGAAAACATGGTTCTTCTaGAAGACACGGTGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLKTWFF*KTRWER
Trigger: CCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTTT...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp TGTGTCCGCTGCTTCACCAGCCCGGGCTTCCCACGGACACTGTGGATGCTATCGGTCGGGTTAAAAGTCTaGACACGTCTGGGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: CVRCFTSPGFPRTLWMLSVGLKV*TRLGSQ
Trigger: TTGGGACCCCAGACGTGTCAAGACTTTTAACCCGAC...CGATAGCATCCACAGTGTCCGTGGGAAGCCCGGGCTGGTGAAGCAGCGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGGGAGTCAGCGACGGTGGACGGGTCAGCCTCACTGGACAGGTCTTCCGTTGGGTGGGCCCTTCCCCTaGAGATTTAAACTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: PGSQRRWTGQPHWTGLPLGGPFP*RFKLQH
Trigger: ATGCTGAAGTTTAAATCTCAAGGGGAAGGGCCCACC...CAACGGAAGACCTGTCCAGTGAGGCTGACCCGTCCACCGTCGCTGACTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCCTCTCCCGAACATCTaGCCAAGAGGGGGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQPLPNI*PRGGSP
Trigger: TGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS GCA 90 bp ACATCTCTAACGCTCCCTACAACTGCCCTCCGAGCTCTGGCCATCTaGTCCCTATGGAGATCAGGAAAAGCCAGGAGGCTGCCGAGTGCT +
Preference number: 5 (lower is better)
Translates to: TSLTLPTTALRALAI*SLWRSGKARRLPSA
Trigger: AGCACTCGGCAGCCTCCTGGCTTTTCCTGATCTCCATAGGGAGCAGATGGCCAGAGCTCGGAGGGCAGTTGTAGGGAGCGTTAGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS GCA 90 bp TCCAGGCGCACTGCCTGGAACAGGGCAGACATGCTCTCACTAACCTaGCTTTGGAGGTGGTGCCTCCCTCCCATCTCCAATGCAAGATCA +
Preference number: 5 (lower is better)
Translates to: SRRTAWNRADMLSLT*LWRWCLPPISNARS
Trigger: TGATCTTGCATTGGAGATGGGAGGGAGGCACCACCTCCAAAGGCAGGTTAGTGAGAGCATGTCTGCCCTGTTCCAGGCAGTGCGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCTTCGGAGCTTGGCTTaGATGAGGCGCTCGGTCCTT +
Preference number: 5 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQLRSLA*MRRSVL
Trigger: AAGGACCGAGCGCCTCATCAAAGCCAAGCTCCGAAG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGGAGCCGCTCCGACCTTaGGGACTCCCAAACTCTAGT +
Preference number: 5 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQEPLRP*GLPNSS
Trigger: ACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCTC...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTATTTGATCGAGCTGGGTaGGAAGCTGCCCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLFDRAG*EAAPTS
Trigger: GGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAAA...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGCCTCCAACTCGCTGTaGCTGGCCGAGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMASNSL*LAEEEA
Trigger: CGCCTCCTCCTCGGCCAGCAACAGCGAGTTGGAGGC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551165.5
CDS-3UTR CAA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTTCATCCTCCATGCCGTaGGGACAGCTCCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLSSSMP*GQLLLL
Trigger: CAGCAAGAGGAGCTGTCCCAACGGCATGGAGGATGA...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACAGATGGCGGGAGCATaGGGGTCCTCACATCGCTCC +
Preference number: 5 (lower is better)
Translates to: LAPTISHQWKATPSPDASQMAGA*GSSHRS
Trigger: GGAGCGATGTGAGGACCCCAATGCTCCCGCCATCTG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCAGCCGCTCTAGCTCTTaGGTGTGCTTGCGGACCAAG +
Preference number: 5 (lower is better)
Translates to: HQVQNASLCSVDGTSALVSRSSS*VCLRTK
Trigger: CTTGGTCCGCAAGCACACCAAAGAGCTAGAGCGGCT...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACGGTTTCCCTGATGGTTaGGAGGTTGCAGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PLEPLPNILPRGGSPGINGFPDG*EVAAGS
Trigger: GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACC...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGGGTTTCCCTGATGGTTaGGAGGTTGCAGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGGFPDG*EVAAGS
Trigger: GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACC...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAAGGCGGGTCAGCTTTaGCTCATCCACGAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQKAGQL*LIHEGL
Trigger: GAGCCCTTCGTGGATGAGCAAAAGCTGACCCGCCTT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCGAGGCTGAGGCAGGATaGCTGGAGCCCAGGAGATCA +
Preference number: 5 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCEAEAG*LEPRRS
Trigger: TGATCTCCTGGGCTCCAGCAATCCTGCCTCAGCCTC...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGTCCTCTGTGCTGCCTTaGGAGCCTCTCCCGAACATC +
Preference number: 5 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGSSVLP*EPLPNI
Trigger: GATGTTCGGGAGAGGCTCCAAAGGCAGCACAGAGGA...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS GCA 90 bp GAGGTTCGTGGCTGCAGTGCTCACATCTCTAACGCTCCCTACAACTaGCCTCCGAGCTCTGGCCATCTGCTCCCTATGGAGATCAGGAAA +
Preference number: 5 (lower is better)
Translates to: EVRGCSAHISNAPYN*PPSSGHLLPMEIRK
Trigger: TTTCCTGATCTCCATAGGGAGCAGATGGCCAGAGCTCGGAGGGCAGTTGTAGGGAGCGTTAGAGATGTGAGCACTGCAGCCACGAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CAA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACATGGCGTTCCACTCGTaGATGCAGCTCTGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHMAFHS*MQLCSE
Trigger: CTCCGAGCAGAGCTGCATCAACGAGTGGAACGCCAT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGTCCCCTTCAGTGGGCTaGTCCACAAATAGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: SCVSAADTQQCRWALPLESPSVG*STNSAG
Trigger: CCCCGCGCTATTTGTGGACAAGCCCACTGAAGGGGA...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTCATAAAGCCCGCGTaGGGGCGCGTGATGCTGCGC +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLIKPA*GRVMLR
Trigger: GCGCAGCATCACGCGCCCCAACGCGGGCTTTATGAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGACAGAGTCCGGAACCTaGCTGGGGCTGTCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMTESGT*LGLSGR
Trigger: CCGGCCAGACAGCCCCAGCAAGGTTCCGGACTCTGT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGAGCCGCTCCGACCTTaGGGACTCCCAAACTCTAGT +
Preference number: 5 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPEPLRP*GLPNSS
Trigger: ACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCTC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCTTTGATCGAGCTGGGTaGGAAGCTGCCCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSFDRAG*EAAPTS
Trigger: GGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAAA...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACAGCTCTTTGGTGTGCTaGCGGACCAAGCCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHSSLVC*RTKPAF
Trigger: GAAGGCAGGCTTGGTCCGCAAGCACACCAAAGAGCT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTAAGCCGCTCTAGCTCTTaGGTGTGCTTGCGGACCAAG +
Preference number: 5 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLSRSSS*VCLRTK
Trigger: CTTGGTCCGCAAGCACACCAAAGAGCTAGAGCGGCT...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACAGCATGAATTCGTCTTaGCCCAGGTGTCCCGACACC +
Preference number: 5 (lower is better)
Translates to: PLEPLPNILPRGGSPGINSMNSS*PRCPDT
Trigger: GGTGTCGGGACACCTGGGCAAAGACGAATTCATGCT...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAGCATGAATTCGTCTTaGCCCAGGTGTCCCGACACC +
Preference number: 5 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQSMNSS*PRCPDT
Trigger: GGTGTCGGGACACCTGGGCAAAGACGAATTCATGCT...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS GCA 90 bp TGTCGCTCCACAGTCGGAGAACCATCCCAATGGTGCAGCTTTTACTaGGATGGGGGAGAGAAGACATGTGGAGTCAGCGTCTACCCACCT +
Preference number: 5 (lower is better)
Translates to: CRSTVGEPSQWCSFY*DGGEKTCGVSVYPP
Trigger: AGGTGGGTAGACGCTGACTCCACATGTCTTCTCTCCCCCATCGCAGTAAAAGCTGCACCATTGGGATGGTTCTCCGACTGTGGAGCGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS CCA 90 bp CTCCACAGTCGGAGAACCATCCCAATGGTGCAGCTTTTACTGCGATaGGGGAGAGAAGACATGTGGAGTCAGCGTCTACCCACCTACGTG +
Preference number: 5 (lower is better)
Translates to: LHSRRTIPMVQLLLR*GREDMWSQRLPTYV
Trigger: CACGTAGGTGGGTAGACGCTGACTCCACATGTCTTCTCTCCCCCATCGCAGTAAAAGCTGCACCATTGGGATGGTTCTCCGACTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS CCA 90 bp CGCACTGCCTGGAACAGGGCAGACATGCTCTCACTAACCTGCCTTTaGAGGTGGTGCCTCCCTCCCATCTCCAATGCAAGATCAACACTT +
Preference number: 5 (lower is better)
Translates to: RTAWNRADMLSLTCL*RWCLPPISNARSTL
Trigger: AAGTGTTGATCTTGCATTGGAGATGGGAGGGAGGCACCACCTCCAAAGGCAGGTTAGTGAGAGCATGTCTGCCCTGTTCCAGGCAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS-3UTR CAA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACACTTCGGAGCTTGGCTTaGATGAGGCGCTCGGTCCTT +
Preference number: 5 (lower is better)
Translates to: RKDSGGLVICLSGLLSETLRSLA*MRRSVL
Trigger: AAGGACCGAGCGCCTCATCAAAGCCAAGCTCCGAAG...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCGAGTTGAGCAGGTTTaGATCGAGCTGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQRVEQV*IELGWK
Trigger: CTTCCAACCCAGCTCGATCAAAACCTGCTCAACTCG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GTCGGAGAACCATCCCAATGGTGCAGCTTTTACTTTCCTTACTGGAAAAGTCCAGCCTCCAACTCGCTGTaGCTGGCCGAGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: VGEPSQWCSFYFPYWKSPASNSL*LAEEEA
Trigger: CGCCTCCTCCTCGGCCAGCAACAGCGAGTTGGAGGC...TGGACTTTTCCAGTAAGGAAAGTAAAAGCTGCACCATTGGGATGGTTCTCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548522.5
CDS-3UTR CAA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATAAGGCGGGTCAGCTTTaGCTCATCCACGAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDKAGQL*LIHEGL
Trigger: GAGCCCTTCGTGGATGAGCAAAAGCTGACCCGCCTT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTAGCTTGCTGACACCTTaGATTCAAGCCTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPSLLTP*IQAWRS
Trigger: GCTGCGCCAGGCTTGAATCAAAGGTGTCAGCAAGCT...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCGAGGGCAAGATGGAATaGTGGAAGAGCTTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIEGKME*WKSFSQ
Trigger: TTGGCTGAAGCTCTTCCACAATTCCATCTTGCCCTC...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CAAGAAGTCGCCAGGTCCTGCAGGGTCATCCACAGGCTGCTGGAGGCTGCTGTCCTGTGCCACTTATGTTaGGAATTTTCCCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: QEVARSCRVIHRLLEAAVLCHLC*EFSPSA
Trigger: AGCTGATGGGGAAAATTCCAAACATAAGTGGCACAG...GACAGCAGCCTCCAGCAGCCTGTGGATGACCCTGCAGGACCTGGCGACTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTATGCAACCAGGGACCTaGCTAGAAGGCTCGGAAGTA +
Preference number: 5 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLMQPGT*LEGSEV
Trigger: TACTTCCGAGCCTTCTAGCAAGGTCCCTGGTTGCAT...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGTCCCTGGCTGTTGCATaGGGACCCTGTGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: FLLVREENPPKVQILSWWSLAVA*GPCDWA
Trigger: GGCCCAGTCACAGGGTCCCAATGCAACAGCCAGGGA...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS CCA 90 bp GCCTGGAACAGGGCAGACATGCTCTCACTAACCTGCCTTTGGAGGTaGTGCCTCCCTCCCATCTCCAATGCAAGATCAACACTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: AWNRADMLSLTCLWR*CLPPISNARSTLSV
Trigger: CACTGAAAGTGTTGATCTTGCATTGGAGATGGGAGGGAGGCACCACCTCCAAAGGCAGGTTAGTGAGAGCATGTCTGCCCTGTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAAGACTCCGCTGGCCTaGAGGGCTGCTTCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMKTPLA*RAASLL
Trigger: CAACAGGGAAGCAGCCCTCAAGGCCAGCGGAGTCTT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCATCACCTGAAGATGTaGAGGCAGATCACCTGCATG +
Preference number: 5 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQHHLKM*RQITCM
Trigger: CATGCAGGTGATCTGCCTCAACATCTTCAGGTGATG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCCCCTTCAGTGGGCTaGTCCACAAATAGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSPSVG*STNSAG
Trigger: CCCCGCGCTATTTGTGGACAAGCCCACTGAAGGGGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAATGATGCTTCGGAGCTaGGCTTTGATGAGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RKDSGGLVICLSGLLSETMMLRS*ALMRRS
Trigger: CGAGCGCCTCATCAAAGCCAAGCTCCGAAGCATCAT...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTCAATGCACCAGGCACTaGGAATGGTTCCTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPQCTRH*EWFLFA
Trigger: AGCGAAGAGGAACCATTCCAAGTGCCTGGTGCATTG...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTTTGATCGAGCTGGGTaGGAAGCTGCCCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMFDRAG*EAAPTS
Trigger: GGAGGTGGGGGCAGCTTCCAACCCAGCTCGATCAAA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCCGAGTTGAGCAGGTTTaGATCGAGCTGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCRVEQV*IELGWK
Trigger: CTTCCAACCCAGCTCGATCAAAACCTGCTCAACTCG...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCCTACCTCCATGCCGTaGGGACAGCTCCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMPTSMP*GQLLLL
Trigger: CAGCAAGAGGAGCTGTCCCAACGGCATGGAGGTAGG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGACTTTGGCAGGACTTTaGGGGTCTCTCTGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGTLAGL*GSLWKV
Trigger: AACCTTCCAGAGAGACCCCAAAAGTCCTGCCAAAGT...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAGAAGCCTCAGGTCCTaGGCTGGCTTCATATCTTTC +
Preference number: 5 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQRSLRS*AGFISF
Trigger: GAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTCT...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGAAAACATGGTTCTTCTaGAAGACACGGTGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGKTWFF*KTRWER
Trigger: CCGCTCCCACCGTGTCTTCAAGAAGAACCATGTTTT...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGTCGGGTTAAAAGTCTaGACACGTCTGGGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPVGLKV*TRLGSQ
Trigger: TTGGGACCCCAGACGTGTCAAGACTTTTAACCCGAC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTGGTGGGCCCTTCCCCTaGAGATTTAAACTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLGGPFP*RFKLQH
Trigger: ATGCTGAAGTTTAAATCTCAAGGGGAAGGGCCCACC...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACTGGAGCAGAATGGGCTaGGACAGTACAGCTGTCTGT +
Preference number: 5 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHWSRMG*DSTAVC
Trigger: ACAGACAGCTGTACTGTCCAAGCCCATTCTGCTCCA...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGTGCAGTGGTGCAATCTaGGCTCACAGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: SCVSAADTQQCRWALPLECSGAI*AHSNLH
Trigger: GTGGAGGTTGCTGTGAGCCAAGATTGCACCACTGCA...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCCACCGTGCCCAAATTaGTCTTTTAGAGTCGGATGC +
Preference number: 5 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQPPCPN*SFRVGC
Trigger: GCATCCGACTCTAAAAGACAAATTTGGGCACGGTGG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCTCTCTCAGCATCTGTaGAGCATCTACTGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQLSQHL*SIYCPL
Trigger: TAGAGGGCAGTAGATGCTCAACAGATGCTGAGAGAG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS CCA 90 bp ATCCCAATGGTGCAGCTTTTACTGCGATGGGGGAGAGAAGACATGTaGAGTCAGCGTCTACCCACCTACGTGTACAGCCTTTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: IPMVQLLLRWGREDM*SQRLPTYVYSLSSS
Trigger: TGAGCTGGAAAGGCTGTACACGTAGGTGGGTAGACGCTGACTCCACATGTCTTCTCTCCCCCATCGCAGTAAAAGCTGCACCATTGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGGCGCACTGCCAGCTaGATTCTGTCTTCGCAACGC +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRRTAS*ILSSQR
Trigger: GCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCAGGCGCACTGCCAGCTaGATTCTGTCTTCGCAACGC +
Preference number: 5 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLRRTAS*ILSSQR
Trigger: GCGTTGCGAAGACAGAATCAAGCTGGCAGTGCGCCT...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGATGGCGTTCCACTCGTaGATGCAGCTCTGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMMAFHS*MQLCSE
Trigger: CTCCGAGCAGAGCTGCATCAACGAGTGGAACGCCAT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTTCGGAGCTTGGCTTaGATGAGGCGCTCGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLRSLA*MRRSVL
Trigger: AAGGACCGAGCGCCTCATCAAAGCCAAGCTCCGAAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATCAATGCACCAGGCACTaGGAATGGTTCCTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDQCTRH*EWFLFA
Trigger: AGCGAAGAGGAACCATTCCAAGTGCCTGGTGCATTG...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATCTCATAAAGCCCGCGTaGGGGCGCGTGATGCTGCGC +
Preference number: 5 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHLIKPA*GRVMLR
Trigger: GCGCAGCATCACGCGCCCCAACGCGGGCTTTATGAG...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGAGCCGCTCCGACCTTaGGGACTCCCAAACTCTAGT +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMEPLRP*GLPNSS
Trigger: ACTAGAGTTTGGGAGTCCCAAAGGTCGGAGCGGCTC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGCTCCTCTTGCTGTTGTaGTTTAGGTTCTCCGAGTTG +
Preference number: 5 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGLLLLL*FRFSEL
Trigger: CAACTCGGAGAACCTAAACAACAACAGCAAGAGGAG...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CGCGTTGGGGCGCGTGATGCTGCGCTTCTGCTTTACATAGTTATATGCTTTTTCTCATCCTCCATGCCGTaGGGACAGCTCCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RVGARDAALLLYIVICFFSSSMP*GQLLLL
Trigger: CAGCAAGAGGAGCTGTCCCAACGGCATGGAGGATGA...GAAAAAGCATATAACTATGTAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCCTTTCTAGAATAGCTTaGGGGAACACAGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: HQVQNASLCSVDGTSALVLSRIA*GNTVLA
Trigger: GGCCAGAACTGTGTTCCCCAAAGCTATTCTAGAAAG...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGAGGGTAGTGTGGGTGTaGTCTCCAAAAAGCATGTGT +
Preference number: 5 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQRVVWV*SPKSMC
Trigger: ACACATGCTTTTTGGAGACAACACCCACACTACCCT...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGACCCTCTCACCTCTTTaGAGATATGCATCACAGACC +
Preference number: 5 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGTLSPL*RYASQT
Trigger: GGTCTGTGATGCATATCTCAAAAGAGGTGAGAGGGT...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp ACATCCGGGAAGCATCCCGACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCGCGGTGAGGATTAACTaGGTAATACATGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: TSGKHPDSPVPFGEAAEIAVRIN*VIHVKP
Trigger: GGGTTTCACATGTATTACCAAGTTAATCCTCACCGC...GATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGTCGGGATGCTTCCCGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS TCA 90 bp CCATGTTCCTACACTGATAAGAATCAGGGACTCCTGCTCTACGCATaGAGTCAGGATGGCATTGATTGGGGCCCTGGAACACTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PCSYTDKNQGLLLYA*SQDGIDWGPGTLCL
Trigger: GAGGCAGAGTGTTCCAGGGCCCCAATCAATGCCATCCTGACTTCATGCGTAGAGCAGGAGTCCCTGATTCTTATCAGTGTAGGAACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546812.1
CDS GCA 90 bp TGGAACAGGGCAGACATGCTCTCACTAACCTGCCTTTGGAGGTGGTaGCTCCCTCCCATCTCCAATGCAAGATCAACACTTTCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: WNRADMLSLTCLWRW*LPPISNARSTLSVF
Trigger: GAACACTGAAAGTGTTGATCTTGCATTGGAGATGGGAGGGAGGCACCACCTCCAAAGGCAGGTTAGTGAGAGCATGTCTGCCCTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS CCA 90 bp CGTTCACTGATGAATTCTAGAAGACACAGGTCTGGGATGGCCCTGTaGACACAACTCCGTAAGTGCTCAGCTGAGGCTTTTGGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: RSLMNSRRHRSGMAL*TQLRKCSAEAFGCS
Trigger: ACTGCACCCAAAAGCCTCAGCTGAGCACTTACGGAGTTGTGTCCACAGGGCCATCCCAGACCTGTGTCTTCTAGAATTCATCAGTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS-3UTR CAA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGTCCCCTTCAGTGGGCTaGTCCACAAATAGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWESPSVG*STNSAG
Trigger: CCCCGCGCTATTTGTGGACAAGCCCACTGAAGGGGA...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGATGATGCTTCGGAGCTaGGCTTTGATGAGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMMMLRS*ALMRRS
Trigger: CGAGCGCCTCATCAAAGCCAAGCTCCGAAGCATCAT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTAAGATAAGGGAGGGCTaGTCCATCTGTCCCAAGATA +
Preference number: 5 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPKIREG*SICPKI
Trigger: TATCTTGGGACAGATGGACAAGCCCTCCCTTATCTT...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCGACTCACGCCCATTTaGCAATGCACCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRLTPI*QCTRHL
Trigger: CAAGTGCCTGGTGCATTGCAAAATGGGCGTGAGTCG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCGACTCACGCCCATTTaGCAATGCACCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNRLTPI*QCTRHL
Trigger: CAAGTGCCTGGTGCATTGCAAAATGGGCGTGAGTCG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTCATAAAGCCCGCGTaGGGGCGCGTGATGCTGCGC +
Preference number: 5 (lower is better)
Translates to: LEKRFQTEHYSLEQALVILIKPA*GRVMLR
Trigger: GCGCAGCATCACGCGCCCCAACGCGGGCTTTATGAG...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGAGCTCCGGGTCAGGTaGGAGCTCATGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEELRVR*ELMEEE
Trigger: CTCCTCTTCCATGAGCTCCAACCTGACCCGGAGCTC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACTTCTTGTGCTGCATGTaGGTTAGTTTCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PLEPLPNILPRGGSPGINFLCCM*VSFFSS
Trigger: GGAGGAGAAGAAACTAACCAACATGCAGCACAAGAA...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CATCAAGTCCAGAATGCTTCACTCTGCTCTGTGGACGGGACCAGCGCTCTCGTCAAATATGAACTAGCCTaGTTCCTGCAGATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: HQVQNASLCSVDGTSALVKYELA*FLQIPP
Trigger: AGGAGGGATCTGCAGGAACAAGGCTAGTTCATATTT...GACGAGAGCGCTGGTCCCGTCCACAGAGCAGAGTGAAGCATTCTGGACTTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCATTTGAGGCTATGCTTTaGTTGGCTGAGGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: LAPTISHQWKATPSPDASFEAML*LAEGKG
Trigger: CCCCTTTCCCTCAGCCAACAAAAGCATAGCCTCAAA...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGTTTGAGGCTATGCTTTaGTTGGCTGAGGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: SCVSAADTQQCRWALPLEFEAML*LAEGKG
Trigger: CCCCTTTCCCTCAGCCAACAAAAGCATAGCCTCAAA...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAGGGAAGGGACAGGGATaGGTCTGTACCTACATTTTG +
Preference number: 5 (lower is better)
Translates to: RKDSGGLVICLSGLLSETGKGQG*VCTYIL
Trigger: CAAAATGTAGGTACAGACCAATCCCTGTCCCTTCCC...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp AAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGAACCACCACCTGAGCCAGCTTTACATTTCCTACTaGTACGGGAAGAGAACCCAC +
Preference number: 5 (lower is better)
Translates to: KHLGSQQDDVSQNHHLSQLYISY*YGKRTH
Trigger: GTGGGTTCTCTTCCCGTACAAGTAGGAAATGTAAAG...CTGGCTCAGGTGGTGGTTCTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CCTTTGGAGCCTCTCCCGAACATCTTGCCAAGAGGGGGTTCCCCAGGCATAAACAGGTGGGAGGATCACTaGAAGACAGGAATTAAAGAC +
Preference number: 5 (lower is better)
Translates to: PLEPLPNILPRGGSPGINRWEDH*KTGIKD
Trigger: GTCTTTAATTCCTGTCTTCAAGTGATCCTCCCACCT...GTTTATGCCTGGGGAACCCCCTCTTGGCAAGATGTTCGGGAGAGGCTCCAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp ACAGTCCCGTTCCTTTCGGGGAAGCCGCTGAAATCTCCTTTCCCTTCCCTAGATACCACAATGCCCAGTTaGGAGAATTCCAGGGGATTC +
Preference number: 5 (lower is better)
Translates to: TVPFLSGKPLKSPFPSLDTTMPS*ENSRGF
Trigger: GAATCCCCTGGAATTCTCCAAACTGGGCATTGTGGT...ATCTAGGGAAGGGAAAGGAGATTTCAGCGGCTTCCCCGAAAGGAACGGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS GCA 90 bp CTGAAGGAAGATGCAGAAGTCGGTAAAATAAAAGAGGTTCGTGGCTaGAGTGCTCACATCTCTAACGCTCCCTACAACTGCCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: LKEDAEVGKIKEVRG*SAHISNAPYNCPPS
Trigger: GCTCGGAGGGCAGTTGTAGGGAGCGTTAGAGATGTGAGCACTGCAGCCACGAACCTCTTTTATTTTACCGACTTCTGCATCTTCCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS GCA 90 bp CCACATGGCCTGGACAGACACAGGCTTAAATATGTGCATCCTTCCTaGTGTGCTCACGCTGAACCCACTTTCCTTACTGGAAAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: PHGLDRHRLKYVHPS*CAHAEPTFLTGKVH
Trigger: GTGGACTTTTCCAGTAAGGAAAGTGGGTTCAGCGTGAGCACAGCAGGAAGGATGCACATATTTAAGCCTGTGTCTGTCCAGGCCATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS GCA 90 bp CTGTTCCTCCTCCATGTTCCTACACTGATAAGAATCAGGGACTCCTaGTCTACGCATGAAGTCAGGATGGCATTGATTGGGGCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LFLLHVPTLIRIRDS*STHEVRMALIGALE
Trigger: TTCCAGGGCCCCAATCAATGCCATCCTGACTTCATGCGTAGAGCAGGAGTCCCTGATTCTTATCAGTGTAGGAACATGGAGGAGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546812.1
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAGCAGAAGCAGTGGGTaGGCTGAAGGAAGATGCAGA +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSRSSG*AEGRCR
Trigger: TCTGCATCTTCCTTCAGCCAACCCACTGCTTCTGCT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCAATGCACCAGGCACTaGGAATGGTTCCTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMQCTRH*EWFLFA
Trigger: AGCGAAGAGGAACCATTCCAAGTGCCTGGTGCATTG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCGAGTTGAGCAGGTTTaGATCGAGCTGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMRVEQV*IELGWK
Trigger: CTTCCAACCCAGCTCGATCAAAACCTGCTCAACTCG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCTGATGGTTTGGAGGTaGCAGCTGGGTCCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LEKRFQTEHYSLEQALVILMVWR*QLGPSG
Trigger: CCCCGAGGGACCCAGCTGCAACCTCCAAACCATCAG...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GACTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCTTCTTGTGCTGCATGTaGGTTAGTTTCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: DSSAGCEGNSLDVCAYVCFLCCM*VSFFSS
Trigger: GGAGGAGAAGAAACTAACCAACATGCAGCACAAGAA...GCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp ATGGGCCCTAGTGGACCTAAGCATCTGGGCTCTCAGCAGGACGATGTGTCTCAGCTCTCTCGAAATGTTTaGACATCTAGCTTGCTGACA +
Preference number: 5 (lower is better)
Translates to: MGPSGPKHLGSQQDDVSQLSRNV*TSSLLT
Trigger: TGTCAGCAAGCTAGATGTCAAAACATTTCGAGAGAG...CTGAGACACATCGTCCTGCTGAGAGCCCAGATGCTTAGGTCCACTAGGGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp TTTAAGTTTTCTGGGGCGGGTTTCCCTGATGGTTTGGAGGTTGCAGCTGGGTCCGAATTCAGCTGGTCCTaGAAGGCTTTCTGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: FKFSGAGFPDGLEVAAGSEFSWS*KAFWFH
Trigger: GTGAAACCAGAAAGCCTTCAAGGACCAGCTGAATTC...GGACCCAGCTGCAACCTCCAAACCATCAGGGAAACCCGCCCCAGAAAACTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp ACAGAGCCAGGCAGCGACTACAGATCCCTCTTATACTCCCTCACTGCTGCTGGGAATGAATGGGTAAGTTaGCCAGAAGCCAAAGACCAA +
Preference number: 5 (lower is better)
Translates to: TEPGSDYRSLLYSLTAAGNEWVS*PEAKDQ
Trigger: TTGGTCTTTGGCTTCTGGCAAACTTACCCATTCATT...CCCAGCAGCAGTGAGGGAGTATAAGAGGGATCTGTAGTCGCTGCCTGGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACCCCCATCAGCTAAGGTaGCATACAAAGCAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNPHQLR*HTKQGP
Trigger: TGGCCCTTGCTTTGTATGCAACCTTAGCTGATGGGG...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TTTAGGAGGCAAGGATGCGTGGGTGGGTGGTGTTTCCTGGGTGGAGCTCTCCTTCAACCTTCATTTGGTTaGCAATGTCTGCAGGAATCT +
Preference number: 5 (lower is better)
Translates to: FRRQGCVGGWCFLGGALLQPSFG*QCLQES
Trigger: AGATTCCTGCAGACATTGCAAACCAAATGAAGGTTG...AAGGAGAGCTCCACCCAGGAAACACCACCCACCCACGCATCCTTGCCTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCATCACCTGAAGATGTaGAGGCAGATCACCTGCATG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMHHLKM*RQITCM
Trigger: CATGCAGGTGATCTGCCTCAACATCTTCAGGTGATG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGTGCCGCTGTTTGCTaGCATCCAAGATGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMCAAVC*HPRCLH
Trigger: ATGAAGGCATCTTGGATGCAAGCAAACAGCGGCACA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTGTGAGACTCCCCAGCTaGGCAAGAGAGTGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIVRLPS*ARECER
Trigger: GCGCTCACACTCTCTTGCCAAGCTGGGGAGTCTCAC...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GTTCTCCCAGGCCACACGACTGACAGCTCCCCTTCTTGTGCTGCATGTTGGTTACTCTCTCGAAATGTTTaGACATCTAGCTTGCTGACA +
Preference number: 5 (lower is better)
Translates to: VLPGHTTDSSPSCAACWLLSRNV*TSSLLT
Trigger: TGTCAGCAAGCTAGATGTCAAAACATTTCGAGAGAG...TAACCAACATGCAGCACAAGAAGGGGAGCTGTCAGTCGTGTGGCCTGGGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAAAATATGAACTAGCCTaGTTCCTGCAGATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: RKDSGGLVICLSGLLSETKYELA*FLQIPP
Trigger: AGGAGGGATCTGCAGGAACAAGGCTAGTTCATATTT...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CTCTTCTGCAGGATGCGAAGGGAACAGTCTGGATGTGTGCGCCTATGTGTGCACAAATGGAAATCGGCATaGTCAATTACCATCCGAGAG +
Preference number: 5 (lower is better)
Translates to: LFCRMRREQSGCVRLCVHKWKSA*SITIRE
Trigger: CTCTCGGATGGTAATTGACAATGCCGATTTCCATTT...GTGCACACATAGGCGCACACATCCAGACTGTTCCCTTCGCATCCTGCAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGGCTGAGATCACACCATaGCACTCCAGTCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEAEITP*HSSLGN
Trigger: GTTGCCCAGACTGGAGTGCAATGGTGTGATCTCAGC...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGTCAGAAACATACAGATaGCTGGGGCCCATCCCACCC +
Preference number: 5 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWESETYR*LGPIPP
Trigger: GGGTGGGATGGGCCCCAGCAATCTGTATGTTTCTGA...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCACAGGCAGAAGGGGATTaGCATGCATTATCAGTGAAT +
Preference number: 5 (lower is better)
Translates to: LAPTISHQWKATPSPDASQAEGD*HALSVN
Trigger: ATTCACTGATAATGCATGCAAATCCCCTTCTGCCTG...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGATGATGCTTCGGAGCTaGGCTTTGATGAGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVMMLRS*ALMRRS
Trigger: CGAGCGCCTCATCAAAGCCAAGCTCCGAAGCATCAT...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAAGATAAGGGAGGGCTaGTCCATCTGTCCCAAGATA +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMKIREG*SICPKI
Trigger: TATCTTGGGACAGATGGACAAGCCCTCCCTTATCTT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTGCAGTTCCTCCAGATaGGATGCATTCCATTCAGAG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMCSSSR*DAFHSE
Trigger: CTCTGAATGGAATGCATCCAATCTGGAGGAACTGCA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCTCCTCTTGCTGTTGTaGTTTAGGTTCTCCGAGTTG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMLLLLL*FRFSEL
Trigger: CAACTCGGAGAACCTAAACAACAACAGCAAGAGGAG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp CGCGTTGGGGCGCGTGATGCTGCGCTTCTGCTTTACATAGTTATATGCTTTTTCCTCCTCTTGCTGTTGTaGTTTAGGTTCTCCGAGTTG +
Preference number: 5 (lower is better)
Translates to: RVGARDAALLLYIVICFFLLLLL*FRFSEL
Trigger: CAACTCGGAGAACCTAAACAACAACAGCAAGAGGAG...GAAAAAGCATATAACTATGTAAAGCAGAAGCGCAGCATCACGCGCCCCAACGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGCAAAAAGAAATTGAGTaGGAAGCCCTGCCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMQKEIE*EALPRV
Trigger: TACCCTGGGCAGGGCTTCCAACTCAATTTCTTTTTG...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS-3UTR CAA 90 bp GGCAGAGGGCTTCACATTTACCCAGTTTCTTCCTACAGGGCCATGAGCAGCCCTGTTTTGACATCTAGCTaGCTGACACCTTTGATTCAA +
Preference number: 5 (lower is better)
Translates to: GRGLHIYPVSSYRAMSSPVLTSS*LTPLIQ
Trigger: TTGAATCAAAGGTGTCAGCAAGCTAGATGTCAAAAC...AGGGCTGCTCATGGCCCTGTAGGAAGAAACTGGGTAAATGTGAAGCCCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACGAATTCAGCTGGTCCTaGAAGGCTTTCTGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNEFSWS*KAFWFH
Trigger: GTGAAACCAGAAAGCCTTCAAGGACCAGCTGAATTC...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGATGCACATGATCACTaGACTCGGTTTCTATACTCA +
Preference number: 5 (lower is better)
Translates to: LAPTISHQWKATPSPDASDAHDH*TRFLYS
Trigger: TGAGTATAGAAACCGAGTCAAGTGATCATGTGCATC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp CTGGCACCAACAATTTCCCACCAATGGAAGGCAACTCCCTCTCCAGATGCCTCAGTCTGTACCTACATTTaGTTGCAAAAGAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LAPTISHQWKATPSPDASVCTYI*LQKSSG
Trigger: TCCTGAGCTCTTTTGCAACAAAATGTAGGTACAGAC...TGAGGCATCTGGAGAGGGAGTTGCCTTCCATTGGTGGGAAATTGTTGGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGATTTTAAGATGGAAGTaGAGGTGGCTCACACCTGTA +
Preference number: 5 (lower is better)
Translates to: SCVSAADTQQCRWALPLEILRWK*RWLTPV
Trigger: TACAGGTGTGAGCCACCTCAACTTCCATCTTAAAAT...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACATCTTCAGAAAGTCTTTaGAGAAACTACTGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: RKDSGGLVICLSGLLSETSSESL*RNYWCG
Trigger: ACCACACCAGTAGTTTCTCAAAAGACTTTCTGAAGA...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGGCCACATGCCATAGTTaGCTGACCCCTGAATTCAAC +
Preference number: 5 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQATCHS*LTPEFN
Trigger: GTTGAATTCAGGGGTCAGCAAACTATGGCATGTGGC...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCCCCCATCAGCTAAGGTaGCATACAAAGCAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFPHQLR*HTKQGP
Trigger: TGGCCCTTGCTTTGTATGCAACCTTAGCTGATGGGG...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCCTGTGCCACTTATGTTaGGAATTTTCCCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLLCHLC*EFSPSA
Trigger: AGCTGATGGGGAAAATTCCAAACATAAGTGGCACAG...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGGCTCTTGTGGAACTCTaGTCTTCCTCTGATATTTTG +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMALVEL*SSSDIL
Trigger: CAAAATATCAGAGGAAGACAAGAGTTCCACAAGAGC...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGAAAAGCAAATGGCTCTaGTGGAACTCTTGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMKSKWL*WNSCLP
Trigger: AGGAAGACAAGAGTTCCACAAGAGCCATTTGCTTTT...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CAA 90 bp CCTGCCCAGGGTATGAATAAGGTACATGGGGTGAAGATGGTGTGCAGAGATATGTCTCACTTAAGTAATTaGAGCTGGAAACCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: PAQGMNKVHGVKMVCRDMSHLSN*SWKPLD
Trigger: GTCCAGAGGTTTCCAGCTCAAATTACTTAAGTGAGA...CATATCTCTGCACACCATCTTCACCCCATGTACCTTATTCATACCCTGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS-3UTR CAA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGAAGATAAGGGAGGGCTaGTCCATCTGTCCCAAGATA +
Preference number: 5 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQKIREG*SICPKI
Trigger: TATCTTGGGACAGATGGACAAGCCCTCCCTTATCTT...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGTGTGCCGCTGTTTGCTaGCATCCAAGATGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVCAAVC*HPRCLH
Trigger: ATGAAGGCATCTTGGATGCAAGCAAACAGCGGCACA...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp TGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCACTTTGGCAGGACTTTaGGGGTCTCTCTGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: WKNAFRQSIIPWNKPWSFTLAGL*GSLWKV
Trigger: AACCTTCCAGAGAGACCCCAAAAGTCCTGCCAAAGT...GAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACGGCTTCATATCTTTCTaGGGTGACGATTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNGFISF*GDDSSF
Trigger: AAAGGAAGAATCGTCACCCAAGAAAGATATGAAGCC...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp GGCACAGAGTCAGCTCAACAACAGCGTGGGACTACTCATCTGATGACTTTACTCGGCTTCATATCTTTCTaGGGTGACGATTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GTESAQQQRGTTHLMTLLGFISF*GDDSSF
Trigger: AAAGGAAGAATCGTCACCCAAGAAAGATATGAAGCC...GAGTAAAGTCATCAGATGAGTAGTCCCACGCTGTTGTTGAGCTGACTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGAGAAGCCTCAGGTCCTaGGCTGGCTTCATATCTTTC +
Preference number: 5 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVRSLRS*AGFISF
Trigger: GAAAGATATGAAGCCAGCCAAGGACCTGAGGCTTCT...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGCTTTCTAGAATAGCTTaGGGGAACACAGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWELSRIA*GNTVLA
Trigger: GGCCAGAACTGTGTTCCCCAAAGCTATTCTAGAAAG...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp GGACAGTACAGCTGTCTGTGTGCACCTGGTGAGCAATCTGTATGCTTAAGCAACTTCAACAACCTTCATTaGGTTTGCAATGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GQYSCLCAPGEQSVCLSNFNNLH*VCNVCR
Trigger: CCTGCAGACATTGCAAACCAAATGAAGGTTGTTGAA...GTTGCTTAAGCATACAGATTGCTCACCAGGTGCACACAGACAGCTGTACTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TTCCTACTTGTACGGGAAGAGAACCCACCCAAAGTCCAAATCCTTTCCTGGTGGTGTACCTACATTTTGTaGCAAAAGAGCTCAGGACAC +
Preference number: 5 (lower is better)
Translates to: FLLVREENPPKVQILSWWCTYIL*QKSSGH
Trigger: GTGTCCTGAGCTCTTTTGCAACAAAATGTAGGTACA...CCACCAGGAAAGGATTTGGACTTTGGGTGGGTTCTCTTCCCGTACAAGTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TCATGTGTTTCAGCAGCAGACACTCAACAATGCAGGTGGGCCCTTCCCCTTGAGGAACCCAAAGAGAATTaGTTAGCTATCTTCAACCTT +
Preference number: 5 (lower is better)
Translates to: SCVSAADTQQCRWALPLEEPKEN*LAIFNL
Trigger: AAGGTTGAAGATAGCTAACAAATTCTCTTTGGGTTC...CTCAAGGGGAAGGGCCCACCTGCATTGTTGAGTGTCTGCTGCTGAAACACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp AGGAAGGACAGTGGAGGACTGGTGATCTGCTTATCGGGACTCCTGTCTGAGACAAATGCCACACTGTATTaGCTGAAGTGGTTTACAAAA +
Preference number: 5 (lower is better)
Translates to: RKDSGGLVICLSGLLSETNATLY*LKWFTK
Trigger: TTTTGTAAACCACTTCAGCAAATACAGTGTGGCATT...TGTCTCAGACAGGAGTCCCGATAAGCAGATCACCAGTCCTCCACTGTCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS GCA 90 bp GAAACCCAAGCACGCTGGAAACAGCCAACCATTAACGATGACCTTTaGCTTGGAAACCATGAGCAAAAATTCCCCTTGGTTTCCCTTATA +
Preference number: 5 (lower is better)
Translates to: ETQARWKQPTINDDL*LGNHEQKFPLVSLI
Trigger: TATAAGGGAAACCAAGGGGAATTTTTGCTCATGGTTTCCAAGGCAAAGGTCATCGTTAATGGTTGGCTGTTTCCAGCGTGCTTGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546697.1
ENST00000546812.1
CDS-3UTR CAA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATTGCAGTTCCTCCAGATaGGATGCATTCCATTCAGAG +
Preference number: 5 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHCSSSR*DAFHSE
Trigger: CTCTGAATGGAATGCATCCAATCTGGAGGAACTGCA...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGTCAGGTAGCTGTTGGTaGTCGGCTTCTCAGATTCAT +
Preference number: 5 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVSGSCW*SASQIH
Trigger: ATGAATCTGAGAAGCCGACAACCAACAGCTACCTGA...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTGCCACATGCCATAGTTaGCTGACCCCTGAATTCAAC +
Preference number: 5 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIATCHS*LTPEFN
Trigger: GTTGAATTCAGGGGTCAGCAAACTATGGCATGTGGC...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATGGAAAGAAACACACCTaGTGTCACCCCAATAGCCTT +
Preference number: 5 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHGKKHT*CHPNSL
Trigger: AAGGCTATTGGGGTGACACAAGGTGTGTTTCTTTCC...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS CCA 90 bp TCTAATTCATTACGAATCTCTTTGGAAGTCACATTTTCTAGATCCTaGCTCATCATGATGCTTCGGAGCTTGGCTTTGATGAGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: SNSLRISLEVTFSRS*LIMMLRSLALMRRS
Trigger: CGAGCGCCTCATCAAAGCCAAGCTCCGAAGCATCATGATGAGCCAGGATCTAGAAAATGTGACTTCCAAAGAGATTCGTAATGAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326470.9
ENST00000326495.10
ENST00000546433.5
ENST00000551165.5
CDS-3UTR CAA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTTCAGGTAGCTGTTGGTaGTCGGCTTCTCAGATTCAT +
Preference number: 5 (lower is better)
Translates to: LEKRFQTEHYSLEQALVISGSCW*SASQIH
Trigger: ATGAATCTGAGAAGCCGACAACCAACAGCTACCTGA...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS-3UTR CAA 90 bp TTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGTGAGAATTGAGGGCAAGATGGAATaGTGGAAGAGCTTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: FFLYYHFCAGRVLITVRIEGKME*WKSFSQ
Trigger: TTGGCTGAAGCTCTTCCACAATTCCATCTTGCCCTC...AATTCTCACTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp GGTGACGATTCTTCCTTTATTACCACTTCTGTGCTGGGAGGGTTCTTATCACAGTCTTCAGAAAGTCTTTaGAGAAACTACTGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: GDDSSFITTSVLGGFLSQSSESL*RNYWCG
Trigger: ACCACACCAGTAGTTTCTCAAAAGACTTTCTGAAGA...CTGTGATAAGAACCCTCCCAGCACAGAAGTGGTAATAAAGGAAGAATCGTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546433.5
CDS-3UTR CAA 90 bp AAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTCGTGAATGAATGGGTAAGTTaGCCAGAAGCCAAAGACCAA +
Preference number: 5 (lower is better)
Translates to: KNAFRQSIIPWNKPWSFVNEWVS*PEAKDQ
Trigger: TTGGTCTTTGGCTTCTGGCAAACTTACCCATTCATT...CACGAATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000546433.5
CDS CCA 90 bp ATCTCCAATGCAAGATCAACACTTTCAGTGTTCTACCTTTCCCTCTaGGAGTTAAAAATGAAGAGAAAATTCTTGGCTGGGCATGGTGGT +
Preference number: 5 (lower is better)
Translates to: ISNARSTLSVFYLSL*ELKMKRKFLAGHGG
Trigger: ACCACCATGCCCAGCCAAGAATTTTCTCTTCATTTTTAACTCCCAGAGGGAAAGGTAGAACACTGAAAGTGTTGATCTTGCATTGGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS-3UTR CAA 90 bp CTATGTGTGCACGTTCTTCCTAAAACATGGTTCTTCTTGAAGACACGGTGGGAGTTTCTTTGGTGTAACTaGTCCAGGTTTTCTAGCAAA +
Preference number: 5 (lower is better)
Translates to: LCVHVLPKTWFFLKTRWEFLWCN*SRFSSK
Trigger: TTTGCTAGAAAACCTGGACAAGTTACACCAAAGAAA...CTCCCACCGTGTCTTCAAGAAGAACCATGTTTTAGGAAGAACGTGCACACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TTAAACAAACGCACGCATAAGTCCACAGGGGCTCCTTTTCATGGCATATCTCATGATCAAGATGCATCTTaGTCTGGCTTCTTTCTACTT +
Preference number: 5 (lower is better)
Translates to: LNKRTHKSTGAPFHGISHDQDAS*SGFFLL
Trigger: AAGTAGAAAGAAGCCAGACAAAGATGCATCTTGATC...ATGAGATATGCCATGAAAAGGAGCCCCTGTGGACTTATGCGTGCGTTTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS-3UTR CAA 90 bp TTGGAAAAACGCTTTCAGACAGAGCATTATTCCCTGGAACAAGCCTTGGTCATTATACATGTGAAACCCTaGCAACTAGGAATATATCCT +
Preference number: 5 (lower is better)
Translates to: LEKRFQTEHYSLEQALVIIHVKP*QLGIYP
Trigger: AGGATATATTCCTAGTTGCAAGGGTTTCACATGTAT...AATGACCAAGGCTTGTTCCAGGGAATAATGCTCTGTCTGAAAGCGTTTTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326495.10
CDS CCA 72 bp TGGGCGTGGGCGAGCGCTGCAGGGTCACCAGGGCCATaGCTGCGGCGCGGTGCGAGGGCGCCACAGACGTCT +
Preference number: 6 (lower is better)
Translates to: WAWASAAGSPGP*LRRGARAPQTS
Trigger: AGACGTCTGTGGCGCCCTCGCACCGCGCCGCAGCCATGGCCCTGGTGACCCTGCAGCGCTCGCCCACGCCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326495.10
ENST00000551165.5
CDS GCA 72 bp CCGGACCCGGTCCGCCCAGGCGCTCTCCAGGCGCACTaGCTGGAACAGGGCAGACATGCTCTCACTAACCTG +
Preference number: 6 (lower is better)
Translates to: PDPVRPGALQAH*LEQGRHALTNL
Trigger: CAGGTTAGTGAGAGCATGTCTGCCCTGTTCCAGGCAGTGCGCCTGGAGAGCGCCTGGGCGGACCGGGTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS GCA 72 bp GAAGGGATGGGGTGTGCCACCCTGCAGGCCGGGCTCTaGCTACCTCCATGCCGTTGGGACAGCTCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: EGMGCATLQAGL*LPPCRWDSSSC
Trigger: GCAAGAGGAGCTGTCCCAACGGCATGGAGGTAGGCAGAGCCCGGCCTGCAGGGTGGCACACCCCATCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS CCA 72 bp ACCCGGTCCGCCCAGGCGCTCTCCAGGCGCACTGCCTaGAACAGGGCAGACATGCTCTCACTAACCTGCCTT +
Preference number: 6 (lower is better)
Translates to: TRSAQALSRRTA*NRADMLSLTCL
Trigger: AAGGCAGGTTAGTGAGAGCATGTCTGCCCTGTTCCAGGCAGTGCGCCTGGAGAGCGCCTGGGCGGACCGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS TCA 72 bp AAGTGCTCAGCTGAGGCTTTTGGGTGCAGTGTGGGCTaGCCGCACGCCCACTCTACAGCAGGGAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: KCSAEAFGCSVG*PHAHSTAGRQL
Trigger: CAGCTGCCTCCCTGCTGTAGAGTGGGCGTGCGGTCAGCCCACACTGCACCCAAAAGCCTCAGCTGAGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS CCA 72 bp TCCGTAAGTGCTCAGCTGAGGCTTTTGGGTGCAGTGTaGGCTGACCGCACGCCCACTCTACAGCAGGGAGGC +
Preference number: 6 (lower is better)
Translates to: SVSAQLRLLGAV*ADRTPTLQQGG
Trigger: GCCTCCCTGCTGTAGAGTGGGCGTGCGGTCAGCCCACACTGCACCCAAAAGCCTCAGCTGAGCACTTACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS CAA 90 bp GGATGGCCCTGTGGACACAACTCCGTAAGTGCTCAGCTGAGGCTTTaGGGTGCAGTGTGGGCTGACCGCACGCCCACTCTACAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: GWPCGHNSVSAQLRL*GAVWADRTPTLQQG
Trigger: TCCCTGCTGTAGAGTGGGCGTGCGGTCAGCCCACACTGCACCCAAAAGCCTCAGCTGAGCACTTACGGAGTTGTGTCCACAGGGCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS GCA 72 bp TCTGCTCCCTATGGAGATCAGGAAAAGCCAGGAGGCTaGCGAGTGCTTCCACGAGGGCTGGGGAGCCAACTC +
Preference number: 6 (lower is better)
Translates to: SAPYGDQEKPGG*RVLPRGLGSQL
Trigger: GAGTTGGCTCCCCAGCCCTCGTGGAAGCACTCGGCAGCCTCCTGGCTTTTCCTGATCTCCATAGGGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS CAA 72 bp GCCTTTCCAGCTCACCACCTGGTCCAGGACGGGCTGTaGGACGTACGTGTGGGAGTAGGCTGTCTGCATAGG +
Preference number: 6 (lower is better)
Translates to: AFPAHHLVQDGL*DVRVGVGCLHR
Trigger: CCTATGCAGACAGCCTACTCCCACACGTACGTCCAACAGCCCGTCCTGGACCAGGTGGTGAGCTGGAAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS GCA 72 bp GGCTGCAGTGCTCACATCTCTAACGCTCCCTACAACTaGCCTCCGAGCTCTGGCCATCTGCTCCCTATGGAG +
Preference number: 6 (lower is better)
Translates to: GCSAHISNAPYN*PPSSGHLLPME
Trigger: CTCCATAGGGAGCAGATGGCCAGAGCTCGGAGGGCAGTTGTAGGGAGCGTTAGAGATGTGAGCACTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS CCA 72 bp GTCCCTACTACAGAGGCTGAGGTAGGCCAATTAGAGTaGGATGGAAGGGATGGGGTGTGCCACCCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: VPTTEAEVGQLE*DGRDGVCHPAG
Trigger: GCCTGCAGGGTGGCACACCCCATCCCTTCCATCCCACTCTAATTGGCCTACCTCAGCCTCTGTAGTAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS CAA 90 bp ACGTGTACAGCCTTTCCAGCTCACCACCTGGTCCAGGACGGGCTGTaGGACGTACGTGTGGGAGTAGGCTGTCTGCATAGGAACCGTTCA +
Preference number: 6 (lower is better)
Translates to: TCTAFPAHHLVQDGL*DVRVGVGCLHRNRS
Trigger: TGAACGGTTCCTATGCAGACAGCCTACTCCCACACGTACGTCCAACAGCCCGTCCTGGACCAGGTGGTGAGCTGGAAAGGCTGTACACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS TCA 72 bp GGGACTCCTGCTCTACGCATGAAGTCAGGATGGCATTaGTTGGGGCCCTGGAACACTCTGCCTCTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: GTPALRMKSGWH*LGPWNTLPLFP
Trigger: GGGGAACAGAGGCAGAGTGTTCCAGGGCCCCAATCAATGCCATCCTGACTTCATGCGTAGAGCAGGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546812.1
CDS CCA 72 bp ACCCTGCAGGCCGGGCTCTGCCTACCTCCATGCCGTTaGGACAGCTCCTCTTGCTGTTGTTGTTTAGGTTCT +
Preference number: 6 (lower is better)
Translates to: TLQAGLCLPPCR*DSSSCCCCLGS
Trigger: AGAACCTAAACAACAACAGCAAGAGGAGCTGTCCCAACGGCATGGAGGTAGGCAGAGCCCGGCCTGCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS CAA 72 bp TGTGGACACAACTCCGTAAGTGCTCAGCTGAGGCTTTaGGGTGCAGTGTGGGCTGACCGCACGCCCACTCTA +
Preference number: 6 (lower is better)
Translates to: CGHNSVSAQLRL*GAVWADRTPTL
Trigger: TAGAGTGGGCGTGCGGTCAGCCCACACTGCACCCAAAAGCCTCAGCTGAGCACTTACGGAGTTGTGTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS GCA 72 bp ACTGCCTGGAACAGGGCAGACATGCTCTCACTAACCTaGCTTTGGAGGTGGTGCCTCCCTCCCATCTCCAAT +
Preference number: 6 (lower is better)
Translates to: TAWNRADMLSLT*LWRWCLPPISN
Trigger: ATTGGAGATGGGAGGGAGGCACCACCTCCAAAGGCAGGTTAGTGAGAGCATGTCTGCCCTGTTCCAGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS CAA 72 bp AGATCCTGGCTCATCATGATGCTTCGGAGCTTGGCTTaGATGAGGCGCTCGGTCCTTTCCCCTTCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: RSWLIMMLRSLA*MRRSVLSPSVG
Trigger: GCCCACTGAAGGGGAAAGGACCGAGCGCCTCATCAAAGCCAAGCTCCGAAGCATCATGATGAGCCAGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326470.9
ENST00000326495.10
ENST00000546433.5
ENST00000551165.5
CDS CAA 72 bp AGGGACTCCTGCTCTACGCATGAAGTCAGGATGGCATaGATTGGGGCCCTGGAACACTCTGCCTCTGTTCCC +
Preference number: 6 (lower is better)
Translates to: RDSCSTHEVRMA*IGALEHSASVP
Trigger: GGGAACAGAGGCAGAGTGTTCCAGGGCCCCAATCAATGCCATCCTGACTTCATGCGTAGAGCAGGAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546812.1
CDS CCA 72 bp CGGAGAACCATCCCAATGGTGCAGCTTTTACTGCGATaGGGGAGAGAAGACATGTGGAGTCAGCGTCTACCC +
Preference number: 6 (lower is better)
Translates to: RRTIPMVQLLLR*GREDMWSQRLP
Trigger: GGGTAGACGCTGACTCCACATGTCTTCTCTCCCCCATCGCAGTAAAAGCTGCACCATTGGGATGGTTCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS CAA 72 bp GCTCTGCCTACCTCCATGCCGTTGGGACAGCTCCTCTaGCTGTTGTTGTTTAGGTTCTCCGAGTTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: ALPTSMPLGQLL*LLLFRFSELSR
Trigger: CCTGCTCAACTCGGAGAACCTAAACAACAACAGCAAGAGGAGCTGTCCCAACGGCATGGAGGTAGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326470.9
ENST00000551165.5
CDS GCA 72 bp ACAGTCGGAGAACCATCCCAATGGTGCAGCTTTTACTaGGATGGGGGAGAGAAGACATGTGGAGTCAGCGTC +
Preference number: 6 (lower is better)
Translates to: TVGEPSQWCSFY*DGGEKTCGVSV
Trigger: GACGCTGACTCCACATGTCTTCTCTCCCCCATCGCAGTAAAAGCTGCACCATTGGGATGGTTCTCCGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS GCA 72 bp TCGTGTCGCTCCACAGTCGGAGAACCATCCCAATGGTaGAGCTTTTACTGCGATGGGGGAGAGAAGACATGT +
Preference number: 6 (lower is better)
Translates to: SCRSTVGEPSQW*SFYCDGGEKTC
Trigger: ACATGTCTTCTCTCCCCCATCGCAGTAAAAGCTGCACCATTGGGATGGTTCTCCGACTGTGGAGCGACACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS CCA 72 bp GTGCAGCTTTTACTGCGATGGGGGAGAGAAGACATGTaGAGTCAGCGTCTACCCACCTACGTGTACAGCCTT +
Preference number: 6 (lower is better)
Translates to: VQLLLRWGREDM*SQRLPTYVYSL
Trigger: AAGGCTGTACACGTAGGTGGGTAGACGCTGACTCCACATGTCTTCTCTCCCCCATCGCAGTAAAAGCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547381.1
CDS CCA 72 bp AGGGCAGACATGCTCTCACTAACCTGCCTTTGGAGGTaGTGCCTCCCTCCCATCTCCAATGCAAGATCAACA +
Preference number: 6 (lower is better)
Translates to: RADMLSLTCLWR*CLPPISNARST
Trigger: TGTTGATCTTGCATTGGAGATGGGAGGGAGGCACCACCTCCAAAGGCAGGTTAGTGAGAGCATGTCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547862.6
CDS CAA 90 bp ATAAGAATCAGGGACTCCTGCTCTACGCATGAAGTCAGGATGGCATaGATTGGGGCCCTGGAACACTCTGCCTCTGTTCCCCCACGACAA +
Preference number: 6 (lower is better)
Translates to: IRIRDSCSTHEVRMA*IGALEHSASVPPRQ
Trigger: TTGTCGTGGGGGAACAGAGGCAGAGTGTTCCAGGGCCCCAATCAATGCCATCCTGACTTCATGCGTAGAGCAGGAGTCCCTGATTCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546812.1
CDS CAA 90 bp ACATTTTCTAGATCCTGGCTCATCATGATGCTTCGGAGCTTGGCTTaGATGAGGCGCTCGGTCCTTTCCCCTTCAGTGGGCTTGTCCACA +
Preference number: 6 (lower is better)
Translates to: TFSRSWLIMMLRSLA*MRRSVLSPSVGLST
Trigger: TGTGGACAAGCCCACTGAAGGGGAAAGGACCGAGCGCCTCATCAAAGCCAAGCTCCGAAGCATCATGATGAGCCAGGATCTAGAAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326470.9
ENST00000326495.10
ENST00000546433.5
ENST00000551165.5
CDS CAA 90 bp GAAGTCACATTTTCTAGATCCTGGCTCATCATGATGCTTCGGAGCTaGGCTTTGATGAGGCGCTCGGTCCTTTCCCCTTCAGTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: EVTFSRSWLIMMLRS*ALMRRSVLSPSVGL
Trigger: CAAGCCCACTGAAGGGGAAAGGACCGAGCGCCTCATCAAAGCCAAGCTCCGAAGCATCATGATGAGCCAGGATCTAGAAAATGTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326470.9
ENST00000326495.10
ENST00000546433.5
ENST00000551165.5
CDS CAA 72 bp TTTTCTAGATCCTGGCTCATCATGATGCTTCGGAGCTaGGCTTTGATGAGGCGCTCGGTCCTTTCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: FSRSWLIMMLRS*ALMRRSVLSPS
Trigger: TGAAGGGGAAAGGACCGAGCGCCTCATCAAAGCCAAGCTCCGAAGCATCATGATGAGCCAGGATCTAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326470.9
ENST00000326495.10
ENST00000546433.5
ENST00000551165.5
CDS TCA 72 bp TACACTGATAAGAATCAGGGACTCCTGCTCTACGCATaGAGTCAGGATGGCATTGATTGGGGCCCTGGAACA +
Preference number: 6 (lower is better)
Translates to: YTDKNQGLLLYA*SQDGIDWGPGT
Trigger: TGTTCCAGGGCCCCAATCAATGCCATCCTGACTTCATGCGTAGAGCAGGAGTCCCTGATTCTTATCAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546812.1
CDS TCA 72 bp TTCCCTGTTGTAAGAAGAGGGCTGCGCCTTTCACCATaGAAAAGCTCTCACTTAAGCAGAAACCCAAGCACG +
Preference number: 6 (lower is better)
Translates to: FPVVRRGLRLSP*KSSHLSRNPST
Trigger: CGTGCTTGGGTTTCTGCTTAAGTGAGAGCTTTTTCATGGTGAAAGGCGCAGCCCTCTTCTTACAACAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546697.1
ENST00000546812.1
CDS GCA 72 bp GATGCAGAAGTCGGTAAAATAAAAGAGGTTCGTGGCTaGAGTGCTCACATCTCTAACGCTCCCTACAACTGC +
Preference number: 6 (lower is better)
Translates to: DAEVGKIKEVRG*SAHISNAPYNC
Trigger: GCAGTTGTAGGGAGCGTTAGAGATGTGAGCACTGCAGCCACGAACCTCTTTTATTTTACCGACTTCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326470.9
CDS GCA 72 bp CTCCATGTTCCTACACTGATAAGAATCAGGGACTCCTaGTCTACGCATGAAGTCAGGATGGCATTGATTGGG +
Preference number: 6 (lower is better)
Translates to: LHVPTLIRIRDS*STHEVRMALIG
Trigger: CCCAATCAATGCCATCCTGACTTCATGCGTAGAGCAGGAGTCCCTGATTCTTATCAGTGTAGGAACATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546812.1
CDS CAA 72 bp GCTGGAAACAGCCAACCATTAACGATGACCTTTGCCTaGGAAACCATGAGCAAAAATTCCCCTTGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: AGNSQPLTMTFA*ETMSKNSPWFP
Trigger: GGGAAACCAAGGGGAATTTTTGCTCATGGTTTCCAAGGCAAAGGTCATCGTTAATGGTTGGCTGTTTCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546697.1
ENST00000546812.1
CDS CAA 90 bp CCCAAGCACGCTGGAAACAGCCAACCATTAACGATGACCTTTGCCTaGGAAACCATGAGCAAAAATTCCCCTTGGTTTCCCTTATATTTC +
Preference number: 6 (lower is better)
Translates to: PKHAGNSQPLTMTFA*ETMSKNSPWFPLYF
Trigger: GAAATATAAGGGAAACCAAGGGGAATTTTTGCTCATGGTTTCCAAGGCAAAGGTCATCGTTAATGGTTGGCTGTTTCCAGCGTGCTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546697.1
ENST00000546812.1
CDS TCA 72 bp TTCCCTGTTGTAAGAAGAGGGCTGCGCCTTTCACCATaGAAAAGCTCTCACTTAAGTAATTTGAGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: FPVVRRGLRLSP*KSSHLSNLSWK
Trigger: TTTCCAGCTCAAATTACTTAAGTGAGAGCTTTTTCATGGTGAAAGGCGCAGCCCTCTTCTTACAACAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326470.9