Pregenerated sensors for SSBP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000157216Ensembl transcript IDs: ENST00000326956.12, ENST00000357475.9, ENST00000371319.8, ENST00000371320.8, ENST00000417664.7, ENST00000448572.1, ENST00000528787.1, ENST00000528930.6, ENST00000530618.1, ENST00000533209.5, ENST00000610401.5
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTaGAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: ACHRVTVTVWAVVES*KGSVVRPLWPQDEG Trigger: ACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGGTGGCATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR TCA 90 bp | GAGGAGGAGGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTaGCGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: EEEGVLGTVHATGSR*RSGLWWNPERGQWS Trigger: GGACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCCTCCTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR GCA 90 bp | AGGATGAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTaGCATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: RMRVLGSGVQACRCC*HGNQARTNASPLLP Trigger: GGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR GCA 90 bp | GGCCACAGGATGAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTaGTGTTGCCATGGAAATCAAGCTAGAACAAACGCGTCCCCACTC | + |
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Preference number: 1 (lower is better) Translates to: GHRMRVLGSGVQACR*CCHGNQARTNASPL Trigger: GAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTCATCCTGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR CCA 90 bp | ACAAAGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTaGGGTGATGAGGTGAGTGGGGCCATGAGCACCCTCCCGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: TKNSGVFQGKTQRFP*GDEVSGAMSTLPGG Trigger: CCCTCCCGGGAGGGTGCTCATGGCCCCACTCACCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGCCTGAAAGGGGTCAGTaGTCCGGCCCCTCTGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: GCPGNSACHRVTVTVWAVPERGQ*SGPSGH Trigger: GTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGG...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR TCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTCCTCTGGCCACAGGATaGGGGTGCTGGGTTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PGHGDGLGCGGILKGVSGPLATG*GCWVLG Trigger: CCCCAGAACCCAGCACCCTCATCCTGTGGCCAGAGG...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGTCTGGGGTCCAAGCGTaGCGCTGCTGTTGCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: GCPGNSACHRVTVTVWAVSGVQA*RCCCHG Trigger: TCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGA...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTGAGGGTGCTGGGTTCTaGGGTCCAAGCGTGCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: PGHGDGLGCGGILKGVSGEGAGF*GPSVPL Trigger: CAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR TCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGGCCACCGGGTCACGGTaGCGGTCTGGGCTGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMATGSR*RSGLWW Trigger: CCACCACAGCCCAGACCGTCACCGTGACCCGGTGGC...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGGTCCAAGCGTGCCGCTaGTGTTGCCATGGAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: GCPGNSACHRVTVTVWAVVQACR*CCHGNQ Trigger: TTGATTTCCATGGCAACAGCAGCGGCACGCTTGGAC...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGCCTGGGAACAGTGCATaGCACCGGGTCACGGTGACG | + |
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Preference number: 2 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMPGNSA*HRVTVT Trigger: CGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGG...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGCAGCCTCTCCCACTCTaGGCCAGGCCACCACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RIRVSSRARHKGFRGVMRQPLPL*ARPPPS Trigger: GCTGGGTGGTGGCCTGGCGCAGAGTGGGAGAGGCTG...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR TCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGCCTCTGGCCACAGGATaGGGGTGCTGGGTTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RIRVSSRARHKGFRGVMRPLATG*GCWVLG Trigger: CCCCAGAACCCAGCACCCTCATCCTGTGGCCAGAGG...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | TGGAATCCTGAAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGTGGCGTGCCGCTGCTGTTaGCATGGAAATCAAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: WNPERGQWSGPSGHRMRVACRCC*HGNQAR Trigger: TCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGC...CACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGGAGGGTGCTGGGTTCTaGGGTCCAAGCGTGCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: RIRVSSRARHKGFRGVMREGAGF*GPSVPL Trigger: CAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGAGGAGGAGGGTGTCCTaGGAACAGTGCATGCCACCG | + |
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Preference number: 2 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMRRRVS*EQCMPP Trigger: CGGTGGCATGCACTGTTCCCAGGACACCCTCCTCCT...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | GTACAAAGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGCCTGAAAGGGGTCAGTaGTCCGGCCCCTCTGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: VQRIRVSSRARHKGFRGVPERGQ*SGPSGH Trigger: GTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGG...CACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCAGGCCACCACCCAGCTaGCAGGATTCTCACTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GPERGGHCFHVPGHSHPVRPPPS*QDSHWE Trigger: TTCCCAGTGAGAATCCTGCCAGCTGGGTGGTGGCCT...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR TCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTCCAAGTGGAAAACGGTaGCTGCCTTTTCTTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PGHGDGLGCGGILKGVSGPSGKR*LPFLLS Trigger: GGAAAGAAGAAAAGGCAGTCACCGTTTTCCACTTGG...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGGTGTCCTGGGAACAGTaGATGCCACCGGGTCACGGT | + |
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Preference number: 2 (lower is better) Translates to: RIRVSSRARHKGFRGVMRVSWEQ*MPPGHG Trigger: ACCGTGACCCGGTGGCATGCACTGTTCCCAGGACAC...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGAGGAGGAGGGTGTCCTaGGAACAGTGCATGCCACCG | + |
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Preference number: 2 (lower is better) Translates to: RIRVSSRARHKGFRGVMRRRRVS*EQCMPP Trigger: CGGTGGCATGCACTGTTCCCAGGACACCCTCCTCCT...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCCACTCCTCCCCTaGCTGTTGCACAAACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMSPLLP*LLHKPK Trigger: TTTTGGTTTGTGCAACAGGCAGGGGAGGAGTGGGGA...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCGCGTGCCGCTGCTGTTaGCATGGAAATCAAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: GPERGGHCFHVPGHSHPVACRCC*HGNQAR Trigger: TCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGC...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGGTCCAAGCGTGCCGCTaGTGTTGCCATGGAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMVQACR*CCHGNQ Trigger: TTGATTTCCATGGCAACAGCAGCGGCACGCTTGGAC...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGAGGCCACCACCCAGCTaGCAGGATTCTCACTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RIRVSSRARHKGFRGVMRRPPPS*QDSHWE Trigger: TTCCCAGTGAGAATCCTGCCAGCTGGGTGGTGGCCT...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTGTGGTCCGGCCCCTCTaGCCACAGGATGAGGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSVVRPL*PQDEGA Trigger: AGCACCCTCATCCTGTGGCCAGAGGGGCCGGACCAC...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTGTGGAAAACGGTGACTaGCTTTTCTTCTTTCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: PGHGDGLGCGGILKGVSGVENGD*LFFFPK Trigger: TTTTGGAAAGAAGAAAAGGCAGTCACCGTTTTCCAC...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGTCCCCACTCCTCCCCTaGCTGTTGCACAAACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: RIRVSSRARHKGFRGVMRSPLLP*LLHKPK Trigger: TTTTGGTTTGTGCAACAGGCAGGGGAGGAGTGGGGA...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | GTACAAAGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGGTCCAAGCGTGCCGCTaGTGTTGCCATGGAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: VQRIRVSSRARHKGFRGVVQACR*CCHGNQ Trigger: TTGATTTCCATGGCAACAGCAGCGGCACGCTTGGAC...CACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTGTGTCCTGGGAACAGTaGATGCCACCGGGTCACGGT | + |
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Preference number: 2 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSVSWEQ*MPPGHG Trigger: ACCGTGACCCGGTGGCATGCACTGTTCCCAGGACAC...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTTGGCAGGATTCTCACTaGGAAGACTGGGGTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSWQDSH*EDWGGG Trigger: GCCCCCACCCCAGTCTTCCCAGTGAGAATCCTGCCA...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR TCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGCCAAGTGGAAAACGGTaGCTGCCTTTTCTTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: RIRVSSRARHKGFRGVMRPSGKR*LPFLLS Trigger: GGAAAGAAGAAAAGGCAGTCACCGTTTTCCACTTGG...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCGTGGAAAACGGTGACTaGCTTTTCTTCTTTCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GPERGGHCFHVPGHSHPVVENGD*LFFFPK Trigger: TTTTGGAAAGAAGAAAAGGCAGTCACCGTTTTCCAC...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR-3UTR GCA 90 bp | GTACAAAGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGGTGGAAAACGGTGACTaGCTTTTCTTCTTTCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VQRIRVSSRARHKGFRGVVENGD*LFFFPK Trigger: TTTTGGAAAGAAGAAAAGGCAGTCACCGTTTTCCAC...CACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR TCA 72 bp | GGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTaGCGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: GVLGTVHATGSR*RSGLWWNPERG Trigger: ACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR CCA 72 bp | TCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTaGGGTGATGAGGTGAGTGGGGCCATGAGCACCCTC | + |
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Preference number: 3 (lower is better) Translates to: SGVFQGKTQRFP*GDEVSGAMSTL Trigger: GAGGGTGCTCATGGCCCCACTCACCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR GCA 72 bp | GTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTaGCATGGAAATCAAGCTAGAACAAACGCGTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: VLGSGVQACRCC*HGNQARTNASP Trigger: TGGGGACGCGTTTGTTCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR GCA 72 bp | ATGAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTaGTGTTGCCATGGAAATCAAGCTAGAACAAACGCG | + |
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Preference number: 3 (lower is better) Translates to: MRVLGSGVQACR*CCHGNQARTNA Trigger: CGCGTTTGTTCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| 3UTR GCA 72 bp | CACAGGATGAGGGTGCTGGGTTCTGGGGTCCAAGCGTaGCGCTGCTGTTGCCATGGAAATCAAGCTAGAACA | + |
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Preference number: 3 (lower is better) Translates to: HRMRVLGSGVQA*RCCCHGNQART Trigger: TGTTCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTCATCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR TCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGCCTCTGGCCACAGGATaGGGGTGCTGGGTTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GCPGNSACHRVTVTVWAVPLATG*GCWVLG Trigger: CCCCAGAACCCAGCACCCTCATCCTGTGGCCAGAGG...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR TCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTGCCACCGGGTCACGGTaGCGGTCTGGGCTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHGDGLGCGGILKGVSGATGSR*RSGLWW Trigger: CCACCACAGCCCAGACCGTCACCGTGACCCGGTGGC...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR TCA 90 bp | GAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTGCCATGGAAATCAGCCACCGGGTCACGGTaGCGGTCTGGGCTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGAGFWGPSVPLLLPWKSATGSR*RSGLWW Trigger: CCACCACAGCCCAGACCGTCACCGTGACCCGGTGGC...TGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGCCTGGGAACAGTGCATaGCACCGGGTCACGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GCPGNSACHRVTVTVWAVPGNSA*HRVTVT Trigger: CGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGG...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR TCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGGCTGTGGTGGAATCCTaGAAGGGGTCAGTGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCPGNSACHRVTVTVWAVAVVES*KGSVVR Trigger: CCGGACCACTGACCCCTTTCAGGATTCCACCACAGC...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGGTGTCCTGGGAACAGTaGATGCCACCGGGTCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCPGNSACHRVTVTVWAVVSWEQ*MPPGHG Trigger: ACCGTGACCCGGTGGCATGCACTGTTCCCAGGACAC...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTGCCATGGAAATCACAGCCTCTCCCACTCTaGGCCAGGCCACCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGAGFWGPSVPLLLPWKSQPLPL*ARPPPS Trigger: GCTGGGTGGTGGCCTGGCGCAGAGTGGGAGAGGCTG...TGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | TGGAATCCTGAAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGTGGAGGGTGCTGGGTTCTaGGGTCCAAGCGTGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WNPERGQWSGPSGHRMRVEGAGF*GPSVPL Trigger: CAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC...CACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTCCTGAAAGGGGTCAGTaGTCCGGCCCCTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGHGDGLGCGGILKGVSGPERGQ*SGPSGH Trigger: GTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGG...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGCGCCGCTGGTCTACTTaGAGCTCAACCGAACGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GCPGNSACHRVTVTVWAVRRWST*SSTERG Trigger: GCCACGTTCGGTTGAGCTCCAAGTAGACCAGCGGCG...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610401.5 |
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| CDS-3UTR TCA 90 bp | TGGAATCCTGAAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGTGACTCCTCCCGGAGGCTaGCTGTGGGGTCCCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: WNPERGQWSGPSGHRMRVTPPGG*LWGPIM Trigger: CATGATGGGACCCCACAGTCAGCCTCCGGGAGGAGT...CACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357475.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTGCCATGGAAATCAGAGGGTGCTGGGTTCTaGGGTCCAAGCGTGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGAGFWGPSVPLLLPWKSEGAGF*GPSVPL Trigger: CAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC...TGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGCGGTCTGGGCTGTGGTaGAATCCTGAAAGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCPGNSACHRVTVTVWAVRSGLW*NPERGQ Trigger: CTGACCCCTTTCAGGATTCCACCACAGCCCAGACCG...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR GCA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCCAGCCTCTCCCACTCTaGGCCAGGCCACCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPERGGHCFHVPGHSHPVQPLPL*ARPPPS Trigger: GCTGGGTGGTGGCCTGGCGCAGAGTGGGAGAGGCTG...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | TGGAATCCTGAAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGTGAGGAGGAGGGTGTCCTaGGAACAGTGCATGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: WNPERGQWSGPSGHRMRVRRRVS*EQCMPP Trigger: CGGTGGCATGCACTGTTCCCAGGACACCCTCCTCCT...CACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTTGGCAGGATTCTCACTaGGAAGACTGGGGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGHGDGLGCGGILKGVSGWQDSH*EDWGGG Trigger: GCCCCCACCCCAGTCTTCCCAGTGAGAATCCTGCCA...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCCGCCGCCGCCGCCGCTaGTCTACTTGGAGCTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GPERGGHCFHVPGHSHPVRRRRR*STWSST Trigger: GGTTGAGCTCCAAGTAGACCAGCGGCGGCGGCGGCG...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610401.5 |
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| CDS-3UTR TCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGGCCACCGGGTCACGGTaGCGGTCTGGGCTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIRVSSRARHKGFRGVMRATGSR*RSGLWW Trigger: CCACCACAGCCCAGACCGTCACCGTGACCCGGTGGC...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGTCCCCACTCCTCCCCTaGCTGTTGCACAAACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCPGNSACHRVTVTVWAVSPLLP*LLHKPK Trigger: TTTTGGTTTGTGCAACAGGCAGGGGAGGAGTGGGGA...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGGCGTGCCGCTGCTGTTaGCATGGAAATCAAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCPGNSACHRVTVTVWAVACRCC*HGNQAR Trigger: TCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGC...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTGCCATGGAAATCAGTGTCCTGGGAACAGTaGATGCCACCGGGTCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGAGFWGPSVPLLLPWKSVSWEQ*MPPGHG Trigger: ACCGTGACCCGGTGGCATGCACTGTTCCCAGGACAC...TGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCCCTGAAAGGGGTCAGTaGTCCGGCCCCTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPERGGHCFHVPGHSHPVPERGQ*SGPSGH Trigger: GTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGG...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTCGGTCTGGGCTGTGGTaGAATCCTGAAAGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGHGDGLGCGGILKGVSGRSGLW*NPERGQ Trigger: CTGACCCCTTTCAGGATTCCACCACAGCCCAGACCG...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | GAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTGCCATGGAAATCATGGCAGGATTCTCACTaGGAAGACTGGGGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGAGFWGPSVPLLLPWKSWQDSH*EDWGGG Trigger: GCCCCCACCCCAGTCTTCCCAGTGAGAATCCTGCCA...TGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACGTGGTCCGGCCCCTCTaGCCACAGGATGAGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHVVRPL*PQDEGA Trigger: AGCACCCTCATCCTGTGGCCAGAGGGGCCGGACCAC...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACCCTGAAAGGGGTCAGTaGTCCGGCCCCTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHPERGQ*SGPSGH Trigger: GTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGG...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR TCA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCGCTGTGGTGGAATCCTaGAAGGGGTCAGTGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPERGGHCFHVPGHSHPVAVVES*KGSVVR Trigger: CCGGACCACTGACCCCTTTCAGGATTCCACCACAGC...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTGCGTGCCGCTGCTGTTaGCATGGAAATCAAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGHGDGLGCGGILKGVSGACRCC*HGNQAR Trigger: TCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGC...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | TGGAATCCTGAAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGTGGTCCAAGCGTGCCGCTaGTGTTGCCATGGAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: WNPERGQWSGPSGHRMRVVQACR*CCHGNQ Trigger: TTGATTTCCATGGCAACAGCAGCGGCACGCTTGGAC...CACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACCCTGGGAACAGTGCATaGCACCGGGTCACGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHPGNSA*HRVTVT Trigger: CGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGG...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | CCGGGTCACGGTGACGGTCTGGGCTGTGGTGGAATCCTGAAAGGGGTCAGTGGTACACAAAGGTTTCCGTaGGGTGATGAGGTGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHGDGLGCGGILKGVSGTQRFP*GDEVSG Trigger: CCCACTCACCTCATCACCCCACGGAAACCTTTGTGT...ACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR TCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACGCTGTGGTGGAATCCTaGAAGGGGTCAGTGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHAVVES*KGSVVR Trigger: CCGGACCACTGACCCCTTTCAGGATTCCACCACAGC...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTGCCATGGAAATCAGCGTGCCGCTGCTGTTaGCATGGAAATCAAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGAGFWGPSVPLLLPWKSACRCC*HGNQAR Trigger: TCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGC...TGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTGCCATGGAAATCAGTCCAAGCGTGCCGCTaGTGTTGCCATGGAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EGAGFWGPSVPLLLPWKSVQACR*CCHGNQ Trigger: TTGATTTCCATGGCAACAGCAGCGGCACGCTTGGAC...TGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR GCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACTCTGGGGTCCAAGCGTaGCGCTGCTGTTGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHSGVQA*RCCCHG Trigger: TCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGA...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | GTACAAAGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGGAGGGTGCTGGGTTCTaGGGTCCAAGCGTGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQRIRVSSRARHKGFRGVEGAGF*GPSVPL Trigger: CAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC...CACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCCGGTCTGGGCTGTGGTaGAATCCTGAAAGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPERGGHCFHVPGHSHPVRSGLW*NPERGQ Trigger: CTGACCCCTTTCAGGATTCCACCACAGCCCAGACCG...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACAGGAGGAGGGTGTCCTaGGAACAGTGCATGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHRRRVS*EQCMPP Trigger: CGGTGGCATGCACTGTTCCCAGGACACCCTCCTCCT...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS-3UTR CCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACTGGCAGGATTCTCACTaGGAAGACTGGGGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHWQDSH*EDWGGG Trigger: GCCCCCACCCCAGTCTTCCCAGTGAGAATCCTGCCA...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR TCA 90 bp | TGGAATCCTGAAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGTGCCAAGTGGAAAACGGTaGCTGCCTTTTCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WNPERGQWSGPSGHRMRVPSGKR*LPFLLS Trigger: GGAAAGAAGAAAAGGCAGTCACCGTTTTCCACTTGG...CACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR GCA 90 bp | GTACAAAGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGCCTGGGAACAGTGCATaGCACCGGGTCACGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VQRIRVSSRARHKGFRGVPGNSA*HRVTVT Trigger: CGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGG...CACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGTGGCAGGATTCTCACTaGGAAGACTGGGGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RIRVSSRARHKGFRGVMRWQDSH*EDWGGG Trigger: GCCCCCACCCCAGTCTTCCCAGTGAGAATCCTGCCA...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACAGGCCACCACCCAGCTaGCAGGATTCTCACTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHRPPPS*QDSHWE Trigger: TTCCCAGTGAGAATCCTGCCAGCTGGGTGGTGGCCT...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGCTGGGTTCTGGGGTCCAAGCGTGCCGCTGCTGTTGCCATGGAAATCACCAAGTGGAAAACGGTaGCTGCCTTTTCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGAGFWGPSVPLLLPWKSPSGKR*LPFLLS Trigger: GGAAAGAAGAAAAGGCAGTCACCGTTTTCCACTTGG...TGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR TCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGTATAAAGCTAACCGGTaGCGAAGCCGAGGACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMYKANR*RSRGQG Trigger: TCCCTGTCCTCGGCTTCGTCACCGGTTAGCTTTATA...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417664.7 |
||
| CDS-3UTR GCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTCAGCCTCTCCCACTCTaGGCCAGGCCACCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSQPLPL*ARPPPS Trigger: GCTGGGTGGTGGCCTGGCGCAGAGTGGGAGAGGCTG...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGACACAAAGGTTTCCGTaGGGTGATGAGGTGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMTQRFP*GDEVSG Trigger: CCCACTCACCTCATCACCCCACGGAAACCTTTGTGT...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR TCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGGGTGACATAAAAGGCTaGAAGAAACCTGGCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMGDIKG*KKPGGM Trigger: CATCCCGCCAGGTTTCTTTCAGCCTTTTATGTCACC...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371319.8 |
||
| CDS-3UTR GCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACGTCCAAGCGTGCCGCTaGTGTTGCCATGGAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHVQACR*CCHGNQ Trigger: TTGATTTCCATGGCAACAGCAGCGGCACGCTTGGAC...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTCCTGAAAGGGGTCAGTaGTCCGGCCCCTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSPERGQ*SGPSGH Trigger: GTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGG...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | GTACAAAGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGAGGCCACCACCCAGCTaGCAGGATTCTCACTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQRIRVSSRARHKGFRGVRPPPS*QDSHWE Trigger: TTCCCAGTGAGAATCCTGCCAGCTGGGTGGTGGCCT...CACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR GCA 90 bp | TGGAATCCTGAAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGTGGTGGAAAACGGTGACTaGCTTTTCTTCTTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WNPERGQWSGPSGHRMRVVENGD*LFFFPK Trigger: TTTTGGAAAGAAGAAAAGGCAGTCACCGTTTTCCAC...CACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR GCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTCCTGGGAACAGTGCATaGCACCGGGTCACGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSPGNSA*HRVTVT Trigger: CGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGG...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR TCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACCCAAGTGGAAAACGGTaGCTGCCTTTTCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHPSGKR*LPFLLS Trigger: GGAAAGAAGAAAAGGCAGTCACCGTTTTCCACTTGG...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR TCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTGCTGTGGTGGAATCCTaGAAGGGGTCAGTGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSAVVES*KGSVVR Trigger: CCGGACCACTGACCCCTTTCAGGATTCCACCACAGC...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTAGGAGGAGGGTGTCCTaGGAACAGTGCATGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSRRRVS*EQCMPP Trigger: CGGTGGCATGCACTGTTCCCAGGACACCCTCCTCCT...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | GTACAAAGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGACACAAAGGTTTCCGTaGGGTGATGAGGTGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQRIRVSSRARHKGFRGVTQRFP*GDEVSG Trigger: CCCACTCACCTCATCACCCCACGGAAACCTTTGTGT...CACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTCGGTCTGGGCTGTGGTaGAATCCTGAAAGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSRSGLW*NPERGQ Trigger: CTGACCCCTTTCAGGATTCCACCACAGCCCAGACCG...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTAGGCCACCACCCAGCTaGCAGGATTCTCACTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSRPPPS*QDSHWE Trigger: TTCCCAGTGAGAATCCTGCCAGCTGGGTGGTGGCCT...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR GCA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGGTGGAAAACGGTGACTaGCTTTTCTTCTTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMVENGD*LFFFPK Trigger: TTTTGGAAAGAAGAAAAGGCAGTCACCGTTTTCCAC...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR GCA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACGTGGAAAACGGTGACTaGCTTTTCTTCTTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGNQARTNASPLLPCLLHVENGD*LFFFPK Trigger: TTTTGGAAAGAAGAAAAGGCAGTCACCGTTTTCCAC...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CCA 90 bp | CACAGCTGCTCCAAAGTCTTTCCATCCAGTCCCAAGCATATACAGAGCAATTCTACACAAAGGTTTCCGTaGGGTGATGAGGTGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSCSKVFPSSPKHIQSNSTQRFP*GDEVSG Trigger: CCCACTCACCTCATCACCCCACGGAAACCTTTGTGT...AGAATTGCTCTGTATATGCTTGGGACTGGATGGAAAGACTTTGGAGCAGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS CCA 90 bp | CCAGGCCCCGTGCCCTTGTGCTACAGAACAGCGCGGGCCCTTCTGTaGGAAGCAGAAGGCGGCCGGGAGCTAGGCGGCGGGGACAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPVPLCYRTARALL*EAEGGRELGGGDRW Trigger: CCATCTGTCCCCGCCGCCTAGCTCCCGGCCGCCTTCTGCTTCCCACAGAAGGGCCCGCGCTGTTCTGTAGCACAAGGGCACGGGGCCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326956.12 |
||
| CDS GCA 90 bp | AGGAGCTGCAAAGGGAGCCGACATCCAAAGGGGGCCAAGCACGGGTaGCCCAGGAGCCGCTTCTCCCTCCAGCATTCTACCCACATATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSCKGSRHPKGAKHG*PRSRFSLQHSTHIS Trigger: AGATATGTGGGTAGAATGCTGGAGGGAGAAGCGGCTCCTGGGGCACCCGTGCTTGGCCCCCTTTGGATGTCGGCTCCCTTTGCAGCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326956.12 |
||
| CDS TCA 90 bp | CCACGCCCAGGGACATGGTGCAGAATGGCGCAGCACACCCCTGTCTaGGCATCAGAGGTTCCCATGCTCCTGAAACCCTCTCCTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: PRPGTWCRMAQHTPV*ASEVPMLLKPSPHT Trigger: TGTGTGAGGAGAGGGTTTCAGGAGCATGGGAACCTCTGATGCTCAGACAGGGGTGTGCTGCGCCATTCTGCACCATGTCCCTGGGCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448572.1 |
||
| CDS-3UTR CAA 90 bp | GGACCAGAACGCGGAGGTCACTGTTTCCATGTCCCAGGTCATAGCCATCCTGTCCCGCCGCTGGTCTACTaGGAGCTCAACCGAACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPERGGHCFHVPGHSHPVPPLVY*ELNRTW Trigger: CCACGTTCGGTTGAGCTCCAAGTAGACCAGCGGCGG...GACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610401.5 |
||
| CDS CCA 90 bp | AGCTGCTGCACTTCAAATGGTCAGCTCTTGTCGCTTCTCCCAGGCTaGACAAGGCAGCAACGCAGAGGAATTCCTGGGGAATCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCCTSNGQLLSLLPG*TRQQRRGIPGESRQ Trigger: CTGCCTGGATTCCCCAGGAATTCCTCTGCGTTGCTGCCTTGTCCAGCCTGGGAGAAGCGACAAGAGCTGACCATTTGAAGTGCAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528787.1 |
||
| CDS-3UTR CAA 90 bp | GGGTGTCCTGGGAACAGTGCATGCCACCGGGTCACGGTGACGGTCTGGGCTGTGCCACTGTCGGGCTTGTaGGTTTTTGAAAGTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GCPGNSACHRVTVTVWAVPLSGL*VFESKN Trigger: GTTTTTACTTTCAAAAACCAACAAGCCCGACAGTGG...CACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
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| CDS TCA 90 bp | CACTGTCCAGAGGTTCAACTCTTGACCCTGCCACTGAAAGCTGTGTaGGCCTGGGCAAGTTACTTCACCTCTCTGTGCCTTGGTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: HCPEVQLLTLPLKAV*AWASYFTSLCLGDL Trigger: GAGGTCACCAAGGCACAGAGAGGTGAAGTAACTTGCCCAGGCTCACACAGCTTTCAGTGGCAGGGTCAAGAGTTGAACCTCTGGACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371320.8 |
||
| CDS-3UTR CAA 90 bp | TGGAATCCTGAAAGGGGTCAGTGGTCCGGCCCCTCTGGCCACAGGATGAGGGTGCCACTGTCGGGCTTGTaGGTTTTTGAAAGTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WNPERGQWSGPSGHRMRVPLSGL*VFESKN Trigger: GTTTTTACTTTCAAAAACCAACAAGCCCGACAGTGG...CACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CAA 90 bp | ATGACGCTGATGCGAGGATCTCGGGACCAGAACGCGGAGGTCACTGTTTCCATGGCTCCACTGTCGGGCTaGTTGGTTTTTGAAAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MTLMRGSRDQNAEVTVSMAPLSG*LVFESK Trigger: TTTACTTTCAAAAACCAACAAGCCCGACAGTGGAGC...CATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CAA 90 bp | CATGGAAATCAAGCTAGAACAAACGCGTCCCCACTCCTCCCCTGCCTGTTGCACCCACTGTCGGGCTTGTaGGTTTTTGAAAGTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HGNQARTNASPLLPCLLHPLSGL*VFESKN Trigger: GTTTTTACTTTCAAAAACCAACAAGCCCGACAGTGG...GTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS-3UTR CAA 90 bp | AGAATTCGGGTGTCTTCCAGGGCAAGACACAAAGGTTTCCGTGGGGTGATGAGGCCACTGTCGGGCTTGTaGGTTTTTGAAAGTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RIRVSSRARHKGFRGVMRPLSGL*VFESKN Trigger: GTTTTTACTTTCAAAAACCAACAAGCCCGACAGTGG...CCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000357475.9 ENST00000371319.8 ENST00000417664.7 ENST00000610401.5 |
||
| CDS GCA 90 bp | AATAAGGTCAGGTTACTAATTATTACTTGTGTACACAAGGGCAAGTaGACGATGCATGGCGCTAACAGTACTAGGTCTCCCAAAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NKVRLLIITCVHKGK*TMHGANSTRSPKGS Trigger: TGAGCCTTTGGGAGACCTAGTACTGTTAGCGCCATGCATCGTGCACTTGCCCTTGTGTACACAAGTAATAATTAGTAACCTGACCTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371320.8 |
||
| CDS CCA 90 bp | CATTCTCACAACAGGGTTAAAAATCACAAATGCACTAGAGAACAGTaGCTACACTGTCCAGAGGTTCAACTCTTGACCCTGCCACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSHNRVKNHKCTREQ*LHCPEVQLLTLPLK Trigger: TTTCAGTGGCAGGGTCAAGAGTTGAACCTCTGGACAGTGTAGCCACTGTTCTCTAGTGCATTTGTGATTTTTAACCCTGTTGTGAGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371320.8 |
||
| CDS GCA 90 bp | TTAGTAATGGCAGTAATAGTTCTTATATATCAAATACCTACTACATaGCGGATGCTTCACACCCGTATTACTTGTGTCTACCATATACTG | + |
|
Preference number: 5 (lower is better) Translates to: LVMAVIVLIYQIPTT*RMLHTRITCVYHIL Trigger: CAGTATATGGTAGACACAAGTAATACGGGTGTGAAGCATCCGGCATGTAGTAGGTATTTGATATATAAGAACTATTACTGCCATTACTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371320.8 |
||
| CDS GCA 72 bp | TGTGCCTGCCCCTCCCGGCCAGGCCCCGTGCCCTTGTaGTACAGAACAGCGCGGGCCCTTCTGTGGGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CACPSRPGPVPL*YRTARALLWEA Trigger: TGCTTCCCACAGAAGGGCCCGCGCTGTTCTGTAGCACAAGGGCACGGGGCCTGGCCGGGAGGGGCAGGCACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326956.12 |
||
| CDS CCA 72 bp | GTGCCCTTGTGCTACAGAACAGCGCGGGCCCTTCTGTaGGAAGCAGAAGGCGGCCGGGAGCTAGGCGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VPLCYRTARALL*EAEGGRELGGG Trigger: CCCGCCGCCTAGCTCCCGGCCGCCTTCTGCTTCCCACAGAAGGGCCCGCGCTGTTCTGTAGCACAAGGGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326956.12 |
||
| CDS CCA 72 bp | AGGCAGGGGGCTGCAGCCACGCTTGAGTCCTGGCCCTaGGGAACCCCTGCTCCGGCAGGCTCTGCTCACACT | + |
|
Preference number: 6 (lower is better) Translates to: RQGAAATLESWP*GTPAPAGSAHT Trigger: AGTGTGAGCAGAGCCTGCCGGAGCAGGGGTTCCCCAGGGCCAGGACTCAAGCGTGGCTGCAGCCCCCTGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528930.6 |
||
| CDS GCA 72 bp | AAAGGGAGCCGACATCCAAAGGGGGCCAAGCACGGGTaGCCCAGGAGCCGCTTCTCCCTCCAGCATTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: KGSRHPKGAKHG*PRSRFSLQHST Trigger: GGTAGAATGCTGGAGGGAGAAGCGGCTCCTGGGGCACCCGTGCTTGGCCCCCTTTGGATGTCGGCTCCCTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326956.12 |
||
| CDS GCA 72 bp | CAGCTGGGCCAGGGTCCTCACCTCGGCCCTCTAAGCTaGAGGGCAGAGGTGCTCATTCCAATGACCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLGQGPHLGPLS*RAEVLIPMTQV Trigger: CACCTGGGTCATTGGAATGAGCACCTCTGCCCTGCAGCTTAGAGGGCCGAGGTGAGGACCCTGGCCCAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528930.6 |
||
| CDS CCA 72 bp | TCGGATCCCACCACAGGGCCCTCTCCATCCCCCGTGTaGAGAGTGTGGTTCCCCAGACAGAGGCACATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SDPTTGPSPSPV*RVWFPRQRHMW Trigger: CCACATGTGCCTCTGTCTGGGGAACCACACTCTCCACACGGGGGATGGAGAGGGCCCTGTGGTGGGATCCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528930.6 |
||
| CDS TCA 72 bp | AGGGTGCTGGCAGAGGGTGGGGGAAGACCTGGACTCTaGGCCACGGGCCGGGTCGTTTTTGCCTTACATGTT | + |
|
Preference number: 6 (lower is better) Translates to: RVLAEGGGRPGL*ATGRVVFALHV Trigger: AACATGTAAGGCAAAAACGACCCGGCCCGTGGCTCAGAGTCCAGGTCTTCCCCCACCCTCTGCCAGCACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000371320.8 ENST00000530618.1 |
||
| CDS CAA 72 bp | GCTCGGGGCAGCTGCTGCACTTCAAATGGTCAGCTCTaGTCGCTTCTCCCAGGCTGGACAAGGCAGCAACGC | + |
|
Preference number: 6 (lower is better) Translates to: ARGSCCTSNGQL*SLLPGWTRQQR Trigger: GCGTTGCTGCCTTGTCCAGCCTGGGAGAAGCGACAAGAGCTGACCATTTGAAGTGCAGCAGCTGCCCCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528787.1 |
||
| CDS CAA 72 bp | CATCTGCCCGGAATACCCTCCCGCATCCCTTCCTCTTaGCAGCCAGGTCAGCCTCCTTTTCCTTCCAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: HLPGIPSRIPSS*QPGQPPFPSKP Trigger: AGGCTTGGAAGGAAAAGGAGGCTGACCTGGCTGCAAAGAGGAAGGGATGCGGGAGGGTATTCCGGGCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533209.5 |
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| CDS CAA 90 bp | CTTCTCCAGCATCTGCCCGGAATACCCTCCCGCATCCCTTCCTCTTaGCAGCCAGGTCAGCCTCCTTTTCCTTCCAAGCCTGGTTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LLQHLPGIPSRIPSS*QPGQPPFPSKPGLV Trigger: TACCAAACCAGGCTTGGAAGGAAAAGGAGGCTGACCTGGCTGCAAAGAGGAAGGGATGCGGGAGGGTATTCCGGGCAGATGCTGGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533209.5 |
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| CDS CCA 72 bp | ACTTCAAATGGTCAGCTCTTGTCGCTTCTCCCAGGCTaGACAAGGCAGCAACGCAGAGGAATTCCTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TSNGQLLSLLPG*TRQQRRGIPGE Trigger: TTCCCCAGGAATTCCTCTGCGTTGCTGCCTTGTCCAGCCTGGGAGAAGCGACAAGAGCTGACCATTTGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528787.1 |
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| CDS TCA 72 bp | AAATCATCGCGTCATAGGGTAATCATGAAGATGAGGTaGGCTGATGCACGCAGCATGCCTGAACCGTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: KSSRHRVIMKMR*ADARSMPEPCP Trigger: CGGGCACGGTTCAGGCATGCTGCGTGCATCAGCTCACCTCATCTTCATGATTACCCTATGACGCGATGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371320.8 ENST00000530618.1 |
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| CDS CCA 72 bp | CTCCCAAAGGCTCAATCCCACCTTATCAGCTCTCATTaGGCAAACAGCCTAGAAAACAAAACACGTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: LPKAQSHLISSH*ANSLENKTRPT Trigger: AGTTGGACGTGTTTTGTTTTCTAGGCTGTTTGCCCAATGAGAGCTGATAAGGTGGGATTGAGCCTTTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371320.8 |
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| CDS GCA 72 bp | TTCCTCATCTGTGATGTATCCAGGGATCCCTTCTTTTaGTCAAAAAGCTGGGTCTCTAATTCCTCTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: FLICDVSRDPFF*SKSWVSNSSCP Trigger: TGGACAAGAGGAATTAGAGACCCAGCTTTTTGAGCAAAAGAAGGGATCCCTGGATACATCACAGATGAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528787.1 |
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| CDS CCA 72 bp | AACAGGGTTAAAAATCACAAATGCACTAGAGAACAGTaGCTACACTGTCCAGAGGTTCAACTCTTGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: NRVKNHKCTREQ*LHCPEVQLLTL Trigger: CAGGGTCAAGAGTTGAACCTCTGGACAGTGTAGCCACTGTTCTCTAGTGCATTTGTGATTTTTAACCCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371320.8 |
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| CDS GCA 72 bp | GCAGTAATAGTTCTTATATATCAAATACCTACTACATaGCGGATGCTTCACACCCGTATTACTTGTGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: AVIVLIYQIPTT*RMLHTRITCVY Trigger: GTAGACACAAGTAATACGGGTGTGAAGCATCCGGCATGTAGTAGGTATTTGATATATAAGAACTATTACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371320.8 |
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