RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SSBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000145687

Ensembl transcript IDs: ENST00000320672.8, ENST00000504136.1, ENST00000504985.5, ENST00000505980.5, ENST00000507968.1, ENST00000509053.5, ENST00000509743.6, ENST00000512923.5, ENST00000514493.5, ENST00000515395.5, ENST00000615665.4

Found 402 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCAGATGAAAATGGTAAGGGCTGAGAAGGTAACAGTGTTCAGTTaGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: MQMKMVRAEKVTVFS*YFISPGRCRDWEGG
Trigger: GCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAACACTGTTACCTTCTCAGCCCTTACCATTTTCATCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR GCA 90 bp TATTTCTCAAGGTATGGTTCACAGACCCAGGGAGACCTTTACACATaGTTAAGATTGGGTACCATTGCTTTAAACAAACACAGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: YFSRYGSQTQGDLYT*LRLGTIALNKHSLW
Trigger: CCAGAGGCTGTGTTTGTTTAAAGCAATGGTACCCAATCTTAAGCATGTGTAAAGGTCTCCCTGGGTCTGTGAACCATACCTTGAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR GCA 90 bp CAAGCTAACATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTaGGTATGTCTTGTATTACTCTTTCCATCCCAAATAACTTTCATC +
Preference number: 1 (lower is better)
Translates to: QANMGVLNLRTGDSI*VCLVLLFPSQITFI
Trigger: GATGAAAGTTATTTGGGATGGAAAGAGTAATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATGTTAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR CCA 90 bp CTTGTCCCCCATACTGGATTACTCCCTCCCATACTATACATTCACTaGCCACTTGTATCGATTAATGTTTTCAAAGACAGAGAACTACAG +
Preference number: 1 (lower is better)
Translates to: LVPHTGLLPPILYIH*PLVSINVFKDRELQ
Trigger: CTGTAGTTCTCTGTCTTTGAAAACATTAATCGATACAAGTGGCCAGTGAATGTATAGTATGGGAGGGAGTAATCCAGTATGGGGGACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR CCA 90 bp ATTCAACTACTTTTGGCAAATATATGGCAACCTTGTCCCCCATACTaGATTACTCCCTCCCATACTATACATTCACTGGCCACTTGTATC +
Preference number: 1 (lower is better)
Translates to: IQLLLANIWQPCPPY*ITPSHTIHSLATCI
Trigger: GATACAAGTGGCCAGTGAATGTATAGTATGGGAGGGAGTAATCCAGTATGGGGGACAAGGTTGCCATATATTTGCCAAAAGTAGTTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR TCA 90 bp AGTCAATGGCTAGATAAAGCAAAGTTACTATCAATGATTTGCTCCTaGATAAAAGCCTTATATTCCAGGAACAGAGCAGAGGCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: SQWLDKAKLLSMICS*IKALYSRNRAEAPW
Trigger: CCAGGGAGCCTCTGCTCTGTTCCTGGAATATAAGGCTTTTATTCAGGAGCAAATCATTGATAGTAACTTTGCTTTATCTAGCCATTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR CCA 90 bp ACATGCTTAAGATTGGGTACCATTGCTTTAAACAAACACAGCCTCTaGCTCCTCATAGCAAACAATAAACTTATTCCACCAGGAGGGAAA +
Preference number: 1 (lower is better)
Translates to: TCLRLGTIALNKHSL*LLIANNKLIPPGGK
Trigger: TTTCCCTCCTGGTGGAATAAGTTTATTGTTTGCTATGAGGAGCCAGAGGCTGTGTTTGTTTAAAGCAATGGTACCCAATCTTAAGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR GCA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCCCGAGATCACACCATTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSPRSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGTGATCTCGG...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTAGCTACTCTGGAGGCTaGGGCAGGAGAATCTCTGGA +
Preference number: 2 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCISYSGG*GRRISG
Trigger: TCCAGAGATTCTCCTGCCTCAGCCTCCAGAGTAGCT...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCAAGGTTTCTGCAGCTTaGCAGCATGAGGCTGTTCTC +
Preference number: 2 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSKVSAA*QHEAVL
Trigger: GAGAACAGCCTCATGCTGTCAAGCTGCAGAAACCTT...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR CAA 90 bp TGGCCACTTGTATCGATTAATGTTTTCAAAGACAGAGAACTACAGTaGTCCCTCCGTATCCAAGGGAGACCGGTTCCAGGACCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: WPLVSINVFKDRELQ*SLRIQGRPVPGPLQ
Trigger: CTGCAGAGGTCCTGGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAAACATTAATCGATACAAGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAATCCGTAGTAGTTCTGTaGAGGGCTGACTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQSVVVL*RADSLW
Trigger: CCACAGTGAGTCAGCCCTTCACAGAACTACTACGGA...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTCCGTAGTAGTTCTGTaGAGGGCTGACTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: QLFESHLDPLSSQKRGESSVVVL*RADSLW
Trigger: CCACAGTGAGTCAGCCCTTCACAGAACTACTACGGA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTCCGTAGTAGTTCTGTaGAGGGCTGACTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: VQLFESHLDPLSSQKRGESVVVL*RADSLW
Trigger: CCACAGTGAGTCAGCCCTTCACAGAACTACTACGGA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATCCGTAGTAGTTCTGTaGAGGGCTGACTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKSVVVL*RADSLW
Trigger: CCACAGTGAGTCAGCCCTTCACAGAACTACTACGGA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR-3UTR CCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTGGCACTTTTCATGGCTaGGGGAGCAGAATTGATTTA +
Preference number: 2 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCIGTFHG*GSRIDL
Trigger: TAAATCAATTCTGCTCCCCCAGCCATGAAAAGTGCC...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCCGTAGTAGTTCTGTaGAGGGCTGACTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: ILICHSVQLFESHLDPLSSVVVL*RADSLW
Trigger: CCACAGTGAGTCAGCCCTTCACAGAACTACTACGGA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCAAGGTTGGTTTGGTGTaGCTGAGATTCCTTTGTTTA +
Preference number: 2 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSKVGLV*LRFLCL
Trigger: TAAACAAAGGAATCTCAGTCACACCAAACCAACCTT...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTCTCCGTACAGTTGTTTaGATCACATTTGGACCCGCT +
Preference number: 2 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFLRTVV*ITFGPA
Trigger: AGCGGGTCCAAATGTGATTCAAACAACTGTACGGAG...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR TCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAAACTCCTGGTGAGAAGTaGCAAATTCAAGCAAATGCT +
Preference number: 2 (lower is better)
Translates to: SIPEASGVLITLFSLVLKTPGEK*QIQANA
Trigger: AGCATTTGCTTGAATTTGTCACTTCTCACCAGGAGT...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR CCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTTCATTCAGGTTACCCTaGCTTGAGGTAAAGACCTTT +
Preference number: 2 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCISFRLP*LEVKTF
Trigger: AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGA...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTCTTTTGGCAAATATATaGCAACCTTGTCCCCCATAC +
Preference number: 2 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCILLANI*QPCPPY
Trigger: GTATGGGGGACAAGGTTGCCATATATTTGCCAAAAG...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTTTATTTCTCAAGGTATaGTTCACAGACCCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCILFLKV*FTDPGR
Trigger: TCTCCCTGGGTCTGTGAACCATACCTTGAGAAATAA...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGGTAGTTTTAGCCTGCTaGAGTCAATGGCTAGATAAA +
Preference number: 2 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRVVLAC*SQWLDK
Trigger: TTTATCTAGCCATTGACTTCAGCAGGCTAAAACTAC...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR TCA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCCTGTGTGTGATTAACTaGGGCTCATTTTATGATAGT +
Preference number: 2 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSLCVIN*GSFYDS
Trigger: ACTATCATAAAATGAGCCTCAGTTAATCACACACAG...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTCTCTTTATCAGCAACTaGCTCCATACTGGAACATTT +
Preference number: 2 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCILFISN*LHTGTF
Trigger: AAATGTTCCAGTATGGAGTCAGTTGCTGATAAAGAG...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGGATAAGTATACATTCTaGGAAATGCATTGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRDKYTF*EMHCQA
Trigger: TGCCTGACAATGCATTTCTCAGAATGTATACTTATC...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR CCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTTGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 2 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCICLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGAAGAGCAGAGGCTCCCTaGCCAGTGAGAACCAATACC +
Preference number: 2 (lower is better)
Translates to: VVYIKTNTNALIKMENTRRAEAP*PVRTNT
Trigger: GGTATTGGTTCTCACTGGCCAGGGAGCCTCTGCTCT...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAAGGTTGGTTTGGTGTaGCTGAGATTCCTTTGTTTA +
Preference number: 2 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEKVGLV*LRFLCL
Trigger: TAAACAAAGGAATCTCAGTCACACCAAACCAACCTT...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGAAGGTTGGTTTGGTGTaGCTGAGATTCCTTTGTTTA +
Preference number: 2 (lower is better)
Translates to: RAILICHSVQLFESHLDPKVGLV*LRFLCL
Trigger: TAAACAAAGGAATCTCAGTCACACCAAACCAACCTT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAAAGGTTGGTTTGGTGTaGCTGAGATTCCTTTGTTTA +
Preference number: 2 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAKVGLV*LRFLCL
Trigger: TAAACAAAGGAATCTCAGTCACACCAAACCAACCTT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGCTCCGTACAGTTGTTTaGATCACATTTGGACCCGCT +
Preference number: 2 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMLRTVV*ITFGPA
Trigger: AGCGGGTCCAAATGTGATTCAAACAACTGTACGGAG...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
3UTR-3UTR GCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAAATTCACAGGATAACTTaGATCAGACGCAATTTAATG +
Preference number: 2 (lower is better)
Translates to: SIPEASGVLITLFSLVLKIHRIT*IRRNLM
Trigger: CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAAT...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR GCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTACATGTATTTTCAAATaGAGTGAGTTAGGCAGAATG +
Preference number: 2 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCITCIFK*SELGRM
Trigger: CATTCTGCCTAACTCACTGCATTTGAAAATACATGT...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR GCA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTGACCACTGCTGTATATaGAGTCTGTGGTTGATTGGA +
Preference number: 2 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTDHCCI*SLWLIG
Trigger: TCCAATCAACCACAGACTGCATATACAGCAGTGGTC...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR GCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAACAAGACCAACACGAATaGATTGATAAAGATGGAAAA +
Preference number: 2 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQQDQHE*IDKDGK
Trigger: TTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTG...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTTGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 2 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFCLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR CCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAATGTATATGCAGTCTGTaGTTGATTGGAATGTCATTA +
Preference number: 2 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQCICSL*LIGMSL
Trigger: TAATGACATTCCAATCAACCACAGACTGCATATACA...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTAAGGTTGGTTTGGTGTaGCTGAGATTCCTTTGTTTA +
Preference number: 2 (lower is better)
Translates to: ILICHSVQLFESHLDPLSKVGLV*LRFLCL
Trigger: TAAACAAAGGAATCTCAGTCACACCAAACCAACCTT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGACTCCGTACAGTTGTTTaGATCACATTTGGACCCGCT +
Preference number: 2 (lower is better)
Translates to: VVYIKTNTNALIKMENTRLRTVV*ITFGPA
Trigger: AGCGGGTCCAAATGTGATTCAAACAACTGTACGGAG...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR TCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCCAGGTTACCCTGGCTTaGGGTAAAGACCTTTTCATC +
Preference number: 2 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPQVTLA*GKDLFI
Trigger: GATGAAAAGGTCTTTACCTCAAGCCAGGGTAACCTG...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR GCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTATTCACAGGATAACTTaGATCAGACGCAATTTAATG +
Preference number: 2 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFIHRIT*IRRNLM
Trigger: CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAAT...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR CCA 90 bp GGAGCAGTTCTGAATGCTTTGCTATACATTCCTAGGGACAATATGATGAAGAAAAGCAAGCAAGATACCTaGATAGAAAAGCAGCATTCC +
Preference number: 2 (lower is better)
Translates to: GAVLNALLYIPRDNMMKKSKQDT*IEKQHS
Trigger: GGAATGCTGCTTTTCTATCCAGGTATCTTGCTTGCT...TTTCTTCATCATATTGTCCCTAGGAATGTATAGCAAAGCATTCAGAACTGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGACAGTCTGTGGTTGATTaGAATGTCATTATGAGCTGC +
Preference number: 2 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGQSVVD*NVIMSC
Trigger: GCAGCTCATAATGACATTCCAATCAACCACAGACTG...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR CAA 90 bp CCTCTAGTACTCCTGGTGAGAAGTGACAAATTCAAGCAAATGCTTTaGTTATCACTTTTGGGCTTCATCATGTTAAAGAGAAAAGATGTT +
Preference number: 2 (lower is better)
Translates to: PLVLLVRSDKFKQML*LSLLGFIMLKRKDV
Trigger: AACATCTTTTCTCTTTAACATGATGAAGCCCAAAAGTGATAACAAAAGCATTTGCTTGAATTTGTCACTTCTCACCAGGAGTACTAGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR TCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAAAGGTTGGTTTGGTGTaGCTGAGATTCCTTTGTTTA +
Preference number: 2 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKKVGLV*LRFLCL
Trigger: TAAACAAAGGAATCTCAGTCACACCAAACCAACCTT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCTATGCAGTCTGTGGTTaGTTGGAATGTCATTATGAG +
Preference number: 2 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPYAVCG*LECHYE
Trigger: CTCATAATGACATTCCAATCAACCACAGACTGCATA...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGACCTGAATACTGTGTGTaGTTAACTGAGGCTCATTTT +
Preference number: 2 (lower is better)
Translates to: VVYIKTNTNALIKMENTRPEYCV*LTEAHF
Trigger: AAAATGAGCCTCAGTTAATCACACACAGTATTCAGG...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR GCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAAGGGCAATTCTAATATaGCACTCCGTACAGTTGTTT +
Preference number: 2 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKRAILI*HSVQLF
Trigger: AAACAACTGTACGGAGTGGCATATTAGAATTGCCCT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
3UTR-3UTR CCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCTGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 2 (lower is better)
Translates to: STLCDSQDNLHQTQFNESCLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
3UTR-3UTR TCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCATGTTGCTAAATATATaGCAACCCCGGTCACTTTAT +
Preference number: 2 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPMLLNI*QPRSLY
Trigger: ATAAAGTGACCGGGGTTGTCATATATTTAGCAACAT...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR TCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGAGATAAGTATACATTCTaGGAAATGCATTGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: VVYIKTNTNALIKMENTRDKYTF*EMHCQA
Trigger: TGCCTGACAATGCATTTCTCAGAATGTATACTTATC...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR CCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGATTTTACAATGTCCTGTaGGTCAATGTATGTATGTGT +
Preference number: 2 (lower is better)
Translates to: VVYIKTNTNALIKMENTRFYNVL*VNVCMC
Trigger: ACACATACATACATTGACCCACAGGACATTGTAAAA...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR GCA 72 bp CCCTCCGTATCCAAGGGAGACCGGTTCCAGGACCTCTaGAGATACCAAAATCCACAGACGCTTAAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: PSVSKGDRFQDL*RYQNPQTLKSF
Trigger: AAAGGACTTAAGCGTCTGTGGATTTTGGTATCTGCAGAGGTCCTGGAACCGGTCTCCCTTGGATACGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CAA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCGCAGTTCTGAATGCTTaGCTATACATTCCTAGGGAC +
Preference number: 3 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSAVLNA*LYIPRD
Trigger: GTCCCTAGGAATGTATAGCAAAGCATTCAGAACTGC...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CAA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGCAGGCAATATTGTCCTaGTCTGAACATCATAGAGTG +
Preference number: 3 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRQAILS*SEHHRV
Trigger: CACTCTATGATGTTCAGACAAGGACAATATTGCCTG...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR CCA 72 bp CTTTTGGCAAATATATGGCAACCTTGTCCCCCATACTaGATTACTCCCTCCCATACTATACATTCACTGGCC +
Preference number: 3 (lower is better)
Translates to: LLANIWQPCPPY*ITPSHTIHSLA
Trigger: GGCCAGTGAATGTATAGTATGGGAGGGAGTAATCCAGTATGGGGGACAAGGTTGCCATATATTTGCCAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CAA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTTGCCACTCCGTACAGTaGTTTGAATCACATTTGGAC +
Preference number: 3 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFCHSVQ*FESHLD
Trigger: GTCCAAATGTGATTCAAACAACTGTACGGAGTGGCA...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR GCA 72 bp ATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTaGGTATGTCTTGTATTACTCTTTCCATCCCAAATA +
Preference number: 3 (lower is better)
Translates to: MGVLNLRTGDSI*VCLVLLFPSQI
Trigger: TATTTGGGATGGAAAGAGTAATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR GCA 72 bp AGGTATGGTTCACAGACCCAGGGAGACCTTTACACATaGTTAAGATTGGGTACCATTGCTTTAAACAAACAC +
Preference number: 3 (lower is better)
Translates to: RYGSQTQGDLYT*LRLGTIALNKH
Trigger: GTGTTTGTTTAAAGCAATGGTACCCAATCTTAAGCATGTGTAAAGGTCTCCCTGGGTCTGTGAACCATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR CCA 72 bp ATAGGACCACTGCTGTATATGCAGTCTGTGGTTGATTaGAATGTCATTATGAGCTGCATGACTATATCCTGC +
Preference number: 3 (lower is better)
Translates to: IGPLLYMQSVVD*NVIMSCMTISC
Trigger: GCAGGATATAGTCATGCAGCTCATAATGACATTCCAATCAACCACAGACTGCATATACAGCAGTGGTCCTAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTACTCCGTACAGTTGTTaGAATCACATTTGGACCCGC +
Preference number: 3 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTTPYSC*NHIWTR
Trigger: GCGGGTCCAAATGTGATTCAAACAACTGTACGGAGT...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR CCA 72 bp TGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTaGCTTGAGGTAAAGACCTTTTCATCTGAATTTGCA +
Preference number: 3 (lower is better)
Translates to: CLDKLSPSFRLP*LEVKTFSSEFA
Trigger: TGCAAATTCAGATGAAAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR TCA 72 bp TCTTATAGGACCACTGCTGTATATGCAGTCTGTGGTTaGTTGGAATGTCATTATGAGCTGCATGACTATATC +
Preference number: 3 (lower is better)
Translates to: SYRTTAVYAVCG*LECHYELHDYI
Trigger: GATATAGTCATGCAGCTCATAATGACATTCCAATCAACCACAGACTGCATATACAGCAGTGGTCCTATAAGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTTTCAAGCAAATGCTTTaGTTATCACTTTTGGGCTTC +
Preference number: 3 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTFKQML*LSLLGF
Trigger: GAAGCCCAAAAGTGATAACAAAAGCATTTGCTTGAA...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR TCA 72 bp CACCTTGTAGTATCAGTGAAGTGGCTGAGAATTAAATaGTCACTTATGCCCTTATCTTTAGATACAGTACCT +
Preference number: 3 (lower is better)
Translates to: HLVVSVKWLRIK*SLMPLSLDTVP
Trigger: AGGTACTGTATCTAAAGATAAGGGCATAAGTGATCATTTAATTCTCAGCCACTTCACTGATACTACAAGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR-3UTR CAA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGATTGTTTGAATCACATTaGGACCCGCTTTCTTCACAA +
Preference number: 3 (lower is better)
Translates to: VVYIKTNTNALIKMENTRLFESH*DPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAA...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR-3UTR CAA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGAAAGTCAAAATTCTTCTaGGTAAAGTCAGGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: VVYIKTNTNALIKMENTRKSKFF*VKSGVW
Trigger: CCAGACACCTGACTTTACCAAGAAGAATTTTGACTT...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR TCA 72 bp CTAGATAAAGCAAAGTTACTATCAATGATTTGCTCCTaGATAAAAGCCTTATATTCCAGGAACAGAGCAGAG +
Preference number: 3 (lower is better)
Translates to: LDKAKLLSMICS*IKALYSRNRAE
Trigger: CTCTGCTCTGTTCCTGGAATATAAGGCTTTTATTCAGGAGCAAATCATTGATAGTAACTTTGCTTTATCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR TCA 72 bp TTGAACAGTCAGTTACACAATGTAGTTTTAGCCTGCTaGAGTCAATGGCTAGATAAAGCAAAGTTACTATCA +
Preference number: 3 (lower is better)
Translates to: LNSQLHNVVLAC*SQWLDKAKLLS
Trigger: TGATAGTAACTTTGCTTTATCTAGCCATTGACTTCAGCAGGCTAAAACTACATTGTGTAACTGACTGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR CCA 72 bp TGCATTCCAAAATCAAAATCAAGTGGCTATGATTTGTaGCACTCCTTCGAATTAGCAGTGATAATCAAGAAA +
Preference number: 3 (lower is better)
Translates to: CIPKSKSSGYDL*HSFELAVIIKK
Trigger: TTTCTTGATTATCACTGCTAATTCGAAGGAGTGCCACAAATCATAGCCACTTGATTTTGATTTTGGAATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACAGCCCCGTCCCCATaGCGACCCACGCAGCCACCC +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESTAPSP*RPTQPP
Trigger: GGGTGGCTGCGTGGGTCGCCATGGGGACGGGGCTGT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGGGCAACGCGCGAGACTaGCAGGCCTCCCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEGNARD*QASPSL
Trigger: GAGGGAGGGGGAGGCCTGTCAGTCTCGCGCGTTGCC...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAGGCAACGCGCGAGACTaGCAGGCCTCCCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAGNARD*QASPSL
Trigger: GAGGGAGGGGGAGGCCTGTCAGTCTCGCGCGTTGCC...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGGGCAACGCGCGAGACTaGCAGGCCTCCCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPGNARD*QASPSL
Trigger: GAGGGAGGGGGAGGCCTGTCAGTCTCGCGCGTTGCC...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGGCCTCCCCCTCCCTCTaGCCTTCCGAAGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEASPSL*PSEARG
Trigger: ACCGCGCGCTTCGGAAGGCCAGAGGGAGGGGGAGGC...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAGCCTCCCCCTCCCTCTaGCCTTCCGAAGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAASPSL*PSEARG
Trigger: ACCGCGCGCTTCGGAAGGCCAGAGGGAGGGGGAGGC...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAACTTCTCCCGGGCCTaGCTGTCGGACGGGACGGCG +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESNFSRA*LSDGTA
Trigger: CGCCGTCCCGTCCGACAGCCAGGCCCGGGAGAAGTT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAAACTTCTCCCGGGCCTaGCTGTCGGACGGGACGGCG +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERANFSRA*LSDGTA
Trigger: CGCCGTCCCGTCCGACAGCCAGGCCCGGGAGAAGTT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGAACTTCTCCCGGGCCTaGCTGTCGGACGGGACGGCG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPNFSRA*LSDGTA
Trigger: CGCCGTCCCGTCCGACAGCCAGGCCCGGGAGAAGTT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAACGGACGGGACGGCGCTaGTGTTACTCTTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKRTGRR*CYSCLC
Trigger: GCAAAGGCAAGAGTAACAGCAGCGCCGTCCCGTCCG...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTAACTTCTCCCGGGCCTaGCTGTCGGACGGGACGGCG +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSNFSRA*LSDGTA
Trigger: CGCCGTCCCGTCCGACAGCCAGGCCCGGGAGAAGTT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTGGTACAGGACCTACTaGCATGCCATCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRWYRTY*HAISWG
Trigger: CCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCA...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAATGCCTTTGCCGTACATaGTTGTGCCGAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKCLCRT*LCREQL
Trigger: GAGCTGCTCTCGGCACAAGCATGTACGGCAAAGGCA...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCCACTGGACTGGGAGCTaGTGCAGCACTGTAATCATG +
Preference number: 4 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSHWTGS*CSTVIM
Trigger: CATGATTACAGTGCTGCAGCAGCTCCCAGTCCAGTG...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTTCCTAGCACTGGACTaGGAGCTGCTGCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRFLALD*ELLQHC
Trigger: ACAGTGCTGCAGCAGCTCCCAGTCCAGTGCTAGGAA...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTGGTACAGGACCTACTaGCATGCCATCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESWYRTY*HAISWG
Trigger: CCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTGGCCCTCCACCTCCTaGAGGACCTACATAATTCCC +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRWPSTS*RTYIIP
Trigger: GGGAATTATGTAGGTCCTCCAGGAGGTGGAGGGCCA...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACCCATGGGACCATCTaGCCCAGGACCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESTHGTI*PRTHWK
Trigger: TTTCCAATGGGTCCTGGGTCAGATGGTCCCATGGGT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAATCCGTAGTAGTTCTGTaGAGGGCTGACTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKSVVVL*RADSLW
Trigger: CCACAGTGAGTCAGCCCTTCACAGAACTACTACGGA...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCTGGGATTACAGGCATaGGTGCCCAGGCGGCAATTG +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGELGLQA*VPRRQL
Trigger: CAATTGCCGCCTGGGCACTCATGCCTGTAATCCCAG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTGCCTTTGCCGTACATaGTTGTGCCGAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESCLCRT*LCREQL
Trigger: GAGCTGCTCTCGGCACAAGCATGTACGGCAAAGGCA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCCAGGACCTACTGGCATaGCATCTCCTGGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESQDLLA*HLLGEC
Trigger: ACATTCCCCCAGGAGATGGCATGCCAGTAGGTCCTG...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR GCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCCCGAGATCACACCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESPRSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGTGATCTCGG...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCGCCTCCCCCTCCCTCTaGCCTTCCGAAGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPASPSL*PSEARG
Trigger: ACCGCGCGCTTCGGAAGGCCAGAGGGAGGGGGAGGC...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTAGCCACCCCCACTATTaGCCGCCCCACGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSSHPHY*PPHAKA
Trigger: AGCTTTGGCGTGGGGCGGCCAATAGTGGGGGTGGCT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGAACAGCCCCGTCCCCATaGCGACCCACGCAGCCACCC +
Preference number: 4 (lower is better)
Translates to: VVYIKTNTNALIKMENTRTAPSP*RPTQPP
Trigger: GGGTGGCTGCGTGGGTCGCCATGGGGACGGGGCTGT...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTTCCTAGCACTGGACTaGGAGCTGCTGCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESFLALD*ELLQHC
Trigger: ACAGTGCTGCAGCAGCTCCCAGTCCAGTGCTAGGAA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTGGTACAGGACCTACTaGCATGCCATCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPWYRTY*HAISWG
Trigger: CCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGGGGAAAGGGCTGTTTTaGGCACTTTTCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRGKGLF*ALFMAG
Trigger: CCCAGCCATGAAAAGTGCCCAAAACAGCCCTTTCCC...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAACCCATGGGACCATCTaGCCCAGGACCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERATHGTI*PRTHWK
Trigger: TTTCCAATGGGTCCTGGGTCAGATGGTCCCATGGGT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGACCCATGGGACCATCTaGCCCAGGACCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGETHGTI*PRTHWK
Trigger: TTTCCAATGGGTCCTGGGTCAGATGGTCCCATGGGT...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTGGACTGGGAGCTGCTaGAGCACTGTAATCATGGAA +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRWTGSC*STVIME
Trigger: TTCCATGATTACAGTGCTGCAGCAGCTCCCAGTCCA...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCAGGACCTACTGGCATaGCATCTCCTGGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPQDLLA*HLLGEC
Trigger: ACATTCCCCCAGGAGATGGCATGCCAGTAGGTCCTG...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR GCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAACAGTGGGGGTCTCATTaGACCTCCATAGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQQWGSH*TSIVLW
Trigger: CCACAGAACTATGGAGGTGCAATGAGACCCCCACTG...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCCATCATCCCTTGGAGTaGCCGGTTGATTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESHHPLE*PVDYSG
Trigger: GCCTGAGTAATCAACCGGGCACTCCAAGGGATGATG...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGGGCTGTTCTCCGGTGTaGACTCCTAGGCACCTGAAT +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPGCSPV*TPRHLN
Trigger: ATTCAGGTGCCTAGGAGTGCACACCGGAGAACAGCC...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTGGGACACCTCCAAGTaGCTGAAAGAACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPWDTSK*LKEPWW
Trigger: CCACCAGGGTTCTTTCAGGCACTTGGAGGTGTCCCA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505980.5
CDS-3UTR CCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAAACTTCTCCCGGGCCTaGCTGTCGGACGGGACGGCG +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKNFSRA*LSDGTA
Trigger: CGCCGTCCCGTCCGACAGCCAGGCCCGGGAGAAGTT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTTCCTAGCACTGGACTaGGAGCTGCTGCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEFLALD*ELLQHC
Trigger: ACAGTGCTGCAGCAGCTCCCAGTCCAGTGCTAGGAA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000615665.4
CDS-3UTR CCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATGGTACAGGACCTACTaGCATGCCATCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKWYRTY*HAISWG
Trigger: CCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAGGCTGAAAGAACCCTaGTGGTACAGGACCTACTGG +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESRLKEP*WYRTYW
Trigger: CCAGTAGGTCCTGTACCACCAGGGTTCTTTCAGCCT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR CCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTTGGCCCTCCACCTCCTaGAGGACCTACATAATTCCC +
Preference number: 4 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFWPSTS*RTYIIP
Trigger: GGGAATTATGTAGGTCCTCCAGGAGGTGGAGGGCCA...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTGGCCCTCCACCTCCTaGAGGACCTACATAATTCCC +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEWPSTS*RTYIIP
Trigger: GGGAATTATGTAGGTCCTCCAGGAGGTGGAGGGCCA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATGGCCCTCCACCTCCTaGAGGACCTACATAATTCCC +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAWPSTS*RTYIIP
Trigger: GGGAATTATGTAGGTCCTCCAGGAGGTGGAGGGCCA...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAAGAGCAGAGGCTCCCTaGCCAGTGAGAACCAATACC +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERARAEAP*PVRTNT
Trigger: GGTATTGGTTCTCACTGGCCAGGGAGCCTCTGCTCT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTGCCTGAAAGAACCCTaGTGGTACAGGACCTACTGG +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESCLKEP*WYRTYW
Trigger: CCAGTAGGTCCTGTACCACCAGGGTTCTTTCAGGCA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505980.5
CDS-3UTR TCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACACCTCCAAGTGCCTaGTTAGGTATCCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESTPPSA*LGILNG
Trigger: CCCATTGAGGATACCTAATCAGGCACTTGGAGGTGT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAACCCATGGGACCATCTaGCCCAGGACCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKTHGTI*PRTHWK
Trigger: TTTCCAATGGGTCCTGGGTCAGATGGTCCCATGGGT...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTCCGTAGTAGTTCTGTaGAGGGCTGACTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPSVVVL*RADSLW
Trigger: CCACAGTGAGTCAGCCCTTCACAGAACTACTACGGA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGCTCCGTACAGTTGTTTaGATCACATTTGGACCCGCT +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRLRTVV*ITFGPA
Trigger: AGCGGGTCCAAATGTGATTCAAACAACTGTACGGAG...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGCAGGTTACCCTGGCTTaGGGTAAAGACCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRQVTLA*GKDLFI
Trigger: GATGAAAAGGTCTTTACCTCAAGCCAGGGTAACCTG...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAACACCTCCAAGTGCCTaGAAGAACCCTGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERATPPSA*KNPGGT
Trigger: TGTACCACCAGGGTTCTTTCAGGCACTTGGAGGTGT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505980.5
CDS-3UTR GCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATGCCTTTGCCGTACATaGTTGTGCCGAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKCLCRT*LCREQL
Trigger: GAGCTGCTCTCGGCACAAGCATGTACGGCAAAGGCA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTGGACTGGGAGCTGCTaGAGCACTGTAATCATGGAA +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESWTGSC*STVIME
Trigger: TTCCATGATTACAGTGCTGCAGCAGCTCCCAGTCCA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCAGTGGGGGTCTCATTaGACCTCCATAGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPQWGSH*TSIVLW
Trigger: CCACAGAACTATGGAGGTGCAATGAGACCCCCACTG...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
CDS-3UTR GCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCAGTGGGGGTCTCATTaGACCTCCATAGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEQWGSH*TSIVLW
Trigger: CCACAGAACTATGGAGGTGCAATGAGACCCCCACTG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
CDS-3UTR GCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCATCATCCCTTGGAGTaGCCGGTTGATTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEHHPLE*PVDYSG
Trigger: GCCTGAGTAATCAACCGGGCACTCCAAGGGATGATG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACATCATCCCTTGGAGTaGCCGGTTGATTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAHHPLE*PVDYSG
Trigger: GCCTGAGTAATCAACCGGGCACTCCAAGGGATGATG...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTGGTACAGGACCTACTaGCATGCCATCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSWYRTY*HAISWG
Trigger: CCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGAGGCTGAAAGAACCCTaGTGGTACAGGACCTACTGG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPRLKEP*WYRTYW
Trigger: CCAGTAGGTCCTGTACCACCAGGGTTCTTTCAGCCT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAAGGCTGAAAGAACCCTaGTGGTACAGGACCTACTGG +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERARLKEP*WYRTYW
Trigger: CCAGTAGGTCCTGTACCACCAGGGTTCTTTCAGCCT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGGTCTACCACCACCTaGACCCATGTTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGERSTTT*THVHSR
Trigger: CCTGGAATGAACATGGGTCCAGGTGGTGGTAGACCT...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAAGGTCTACCACCACCTaGACCCATGTTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERARSTTT*THVHSR
Trigger: CCTGGAATGAACATGGGTCCAGGTGGTGGTAGACCT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGAGGTCTACCACCACCTaGACCCATGTTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPRSTTT*THVHSR
Trigger: CCTGGAATGAACATGGGTCCAGGTGGTGGTAGACCT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGCAGAGGCTCCCTaGCCAGTGAGAACCAATACC +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKRAEAP*PVRTNT
Trigger: GGTATTGGTTCTCACTGGCCAGGGAGCCTCTGCTCT...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCCCTTGTCCCCCATACTaGATTACTCCCTCCCATACT +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESPCPPY*ITPSHT
Trigger: AGTATGGGAGGGAGTAATCCAGTATGGGGGACAAGG...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTCCAGGGTACCGAGGTaGCATAAAAGGCTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESSRVPR*HKRLKE
Trigger: TTCTTTCAGCCTTTTATGTCACCTCGGTACCCTGGA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGACACCTCCAAGTGCCTaGTTAGGTATCCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPTPPSA*LGILNG
Trigger: CCCATTGAGGATACCTAATCAGGCACTTGGAGGTGT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGACACCTCCAAGTGCCTaGTTAGGTATCCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGETPPSA*LGILNG
Trigger: CCCATTGAGGATACCTAATCAGGCACTTGGAGGTGT...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAACACCTCCAAGTGCCTaGTTAGGTATCCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERATPPSA*LGILNG
Trigger: CCCATTGAGGATACCTAATCAGGCACTTGGAGGTGT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTACCCATGGGACCATCTaGCCCAGGACCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSTHGTI*PRTHWK
Trigger: TTTCCAATGGGTCCTGGGTCAGATGGTCCCATGGGT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGAAGGTTTCTGCAGCTTaGCAGCATGAGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPKVSAA*QHEAVL
Trigger: GAGAACAGCCTCATGCTGTCAAGCTGCAGAAACCTT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAAGGTTTCTGCAGCTTaGCAGCATGAGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEKVSAA*QHEAVL
Trigger: GAGAACAGCCTCATGCTGTCAAGCTGCAGAAACCTT...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCCCTTGGGACACTTATTaGACTGAGGATTTCACTTCA +
Preference number: 4 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSPWDTY*TEDFTS
Trigger: TGAAGTGAAATCCTCAGTTCAATAAGTGTCCCAAGG...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTGCCTTTGCCGTACATaGTTGTGCCGAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSCLCRT*LCREQL
Trigger: GAGCTGCTCTCGGCACAAGCATGTACGGCAAAGGCA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAAACGTCTCTCTGGAGCTaGACAGTAGAGATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQTSLWS*TVEIPK
Trigger: TTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGT...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACGTCTCTCTGGAGCTaGACAGTAGAGATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESTSLWS*TVEIPK
Trigger: TTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTTGGACTGGGAGCTGCTaGAGCACTGTAATCATGGAA +
Preference number: 4 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFWTGSC*STVIME
Trigger: TTCCATGATTACAGTGCTGCAGCAGCTCCCAGTCCA...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACACTGGACTGGGAGCTaGTGCAGCACTGTAATCATG +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKHWTGS*CSTVIM
Trigger: CATGATTACAGTGCTGCAGCAGCTCCCAGTCCAGTG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000615665.4
CDS-3UTR GCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACAGTGGGGGTCTCATTaGACCTCCATAGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKQWGSH*TSIVLW
Trigger: CCACAGAACTATGGAGGTGCAATGAGACCCCCACTG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
CDS-3UTR GCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACATCATCCCTTGGAGTaGCCGGTTGATTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKHHPLE*PVDYSG
Trigger: GCCTGAGTAATCAACCGGGCACTCCAAGGGATGATG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTGGCTGTTCTCCGGTGTaGACTCCTAGGCACCTGAAT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSGCSPV*TPRHLN
Trigger: ATTCAGGTGCCTAGGAGTGCACACCGGAGAACAGCC...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCAGCCACCCCCACTATTaGCCGCCCCACGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPSHPHY*PPHAKA
Trigger: AGCTTTGGCGTGGGGCGGCCAATAGTGGGGGTGGCT...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTGTTTCACGTCTCTCTaGAGCTGCACAGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESCFTSL*SCTVEI
Trigger: GATCTCTACTGTGCAGCTCCAGAGAGACGTGAAACA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAATGGCCCACCCATATTTaGATGTCCTTGTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQWPTHI*MSLLSS
Trigger: ACTCGACAACAAGGACATCCAAATATGGGTGGGCCA...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTGGCCCACCCATATTTaGATGTCCTTGTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESWPTHI*MSLLSS
Trigger: ACTCGACAACAAGGACATCCAAATATGGGTGGGCCA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATTCGCCATCATCCCTTaGAGTGCCCGGTTGATTACT +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAFAIIP*SARLIT
Trigger: AGTAATCAACCGGGCACTCCAAGGGATGATGGCGAA...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTTCGCCATCATCCCTTaGAGTGCCCGGTTGATTACT +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPFAIIP*SARLIT
Trigger: AGTAATCAACCGGGCACTCCAAGGGATGATGGCGAA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTTCGCCATCATCCCTTaGAGTGCCCGGTTGATTACT +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEFAIIP*SARLIT
Trigger: AGTAATCAACCGGGCACTCCAAGGGATGATGGCGAA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGGGTGACATAAAAGGCTaGAAGAACCCTGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEGDIKG*KNPGGT
Trigger: TGTACCACCAGGGTTCTTTCAGCCTTTTATGTCACC...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000512923.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCTTGGAGTGCCCGGTTaGTTACTCAGGCTCATATTA +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGELGVPG*LLRLIL
Trigger: TAATATGAGCCTGAGTAATCAACCGGGCACTCCAAG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACTTGGAGTGCCCGGTTaGTTACTCAGGCTCATATTA +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERALGVPG*LLRLIL
Trigger: TAATATGAGCCTGAGTAATCAACCGGGCACTCCAAG...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTGGAGTGCCCGGTTaGTTACTCAGGCTCATATTA +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPLGVPG*LLRLIL
Trigger: TAATATGAGCCTGAGTAATCAACCGGGCACTCCAAG...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTCCGTACAGTTGTTTaGATCACATTTGGACCCGCT +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPLRTVV*ITFGPA
Trigger: AGCGGGTCCAAATGTGATTCAAACAACTGTACGGAG...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCTCCGTACAGTTGTTTaGATCACATTTGGACCCGCT +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGELRTVV*ITFGPA
Trigger: AGCGGGTCCAAATGTGATTCAAACAACTGTACGGAG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCGTAGTTTTAGCCTGCTaGAGTCAATGGCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSVVLAC*SQWLDK
Trigger: TTTATCTAGCCATTGACTTCAGCAGGCTAAAACTAC...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAAGAAAATGGTAAGGGCTaGGAAGGTAACAGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQENGKG*EGNSVQ
Trigger: CTGAACACTGTTACCTTCTCAGCCCTTACCATTTTC...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAAAAAATCAAGTGGCTATaGTTTGTGGCACTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKKIKWL*FVALLR
Trigger: TCGAAGGAGTGCCACAAATCATAGCCACTTGATTTT...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAACGTCTCTCTGGAGCTaGACAGTAGAGATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERATSLWS*TVEIPK
Trigger: TTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGGGAGGAGTCATTCTCTaGATTGGCCCACCCATATTT +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPGGVIL*IGPPIF
Trigger: AAATATGGGTGGGCCAATGCAGAGAATGACTCCTCC...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGGGAGGAGTCATTCTCTaGATTGGCCCACCCATATTT +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEGGVIL*IGPPIF
Trigger: AAATATGGGTGGGCCAATGCAGAGAATGACTCCTCC...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTCATCATCCCTTGGAGTaGCCGGTTGATTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSHHPLE*PVDYSG
Trigger: GCCTGAGTAATCAACCGGGCACTCCAAGGGATGATG...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTCTGAGGCAGGAGAATTaGATGAACCCGGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSLRQEN*MNPGGE
Trigger: TTCACCTCCCGGGTTCATGCAATTCTCCTGCCTCAG...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTGTTTCACGTCTCTCTaGAGCTGCACAGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPCFTSL*SCTVEI
Trigger: GATCTCTACTGTGCAGCTCCAGAGAGACGTGAAACA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATGGCCCACCCATATTTaGATGTCCTTGTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAWPTHI*MSLLSS
Trigger: ACTCGACAACAAGGACATCCAAATATGGGTGGGCCA...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAGTCATTCTCTGCATTaGCCCACCCATATTTGGATG +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESSHSLH*PTHIWM
Trigger: CATCCAAATATGGGTGGGCCAATGCAGAGAATGACT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTAGGTCTACCACCACCTaGACCCATGTTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSRSTTT*THVHSR
Trigger: CCTGGAATGAACATGGGTCCAGGTGGTGGTAGACCT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAAAGCAAGCAAGATACCTaGATAGAAAAGCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKSKQDT*IEKQHS
Trigger: GGAATGCTGCTTTTCTATCCAGGTATCTTGCTTGCT...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAACAGTCTGTGGTTGATTaGAATGTCATTATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKQSVVD*NVIMSC
Trigger: GCAGCTCATAATGACATTCCAATCAACCACAGACTG...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAATCATTCAGGTTACCCTaGCTTGAGGTAAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKSFRLP*LEVKTF
Trigger: AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGA...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp CATGGGTGTGCTAAACCTACGCACAGGAGACTCCATCTGCGTATGTCTTGTATTAGTGGCTATGATTTGTaGCACTCCTTCGAATTAGCA +
Preference number: 4 (lower is better)
Translates to: HGCAKPTHRRLHLRMSCISGYDL*HSFELA
Trigger: TGCTAATTCGAAGGAGTGCCACAAATCATAGCCACT...AATACAAGACATACGCAGATGGAGTCTCCTGTGCGTAGGTTTAGCACACCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR CAA 72 bp CTAATATGCCACTCCGTACAGTTGTTTGAATCACATTaGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LICHSVQLFESH*DPLSSQKRGES
Trigger: GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR CAA 72 bp GTATCGATTAATGTTTTCAAAGACAGAGAACTACAGTaGTCCCTCCGTATCCAAGGGAGACCGGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSINVFKDRELQ*SLRIQGRPVPG
Trigger: TCCTGGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAAACATTAATCGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCACCCATGGGACCATCTaGCCCAGGACCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: STLCDSQDNLHQTQFNESTHGTI*PRTHWK
Trigger: TTTCCAATGGGTCCTGGGTCAGATGGTCCCATGGGT...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR TCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACTTGGAGTGCCCGGTTaGTTACTCAGGCTCATATTA +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKLGVPG*LLRLIL
Trigger: TAATATGAGCCTGAGTAATCAACCGGGCACTCCAAG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGTCCGTAGTAGTTCTGTaGAGGGCTGACTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMSVVVL*RADSLW
Trigger: CCACAGTGAGTCAGCCCTTCACAGAACTACTACGGA...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR TCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACTCCGTACAGTTGTTTaGATCACATTTGGACCCGCT +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKLRTVV*ITFGPA
Trigger: AGCGGGTCCAAATGTGATTCAAACAACTGTACGGAG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTATGCAGTCTGTGGTTaGTTGGAATGTCATTATGAG +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRYAVCG*LECHYE
Trigger: CTCATAATGACATTCCAATCAACCACAGACTGCATA...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGCACTGGACTGGGAGCTaGTGCAGCACTGTAATCATG +
Preference number: 4 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMHWTGS*CSTVIM
Trigger: CATGATTACAGTGCTGCAGCAGCTCCCAGTCCAGTG...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAGGAGGAGTCATTCTCTaGATTGGCCCACCCATATTT +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKGGVIL*IGPPIF
Trigger: AAATATGGGTGGGCCAATGCAGAGAATGACTCCTCC...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGAGGGCAATTCTAATATaGCACTCCGTACAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRRAILI*HSVQLF
Trigger: AAACAACTGTACGGAGTGGCATATTAGAATTGCCCT...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAAGGAGACCTTTACACATaGTTAAGATTGGGTACCATT +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKGDLYT*LRLGTI
Trigger: AATGGTACCCAATCTTAAGCATGTGTAAAGGTCTCC...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATGTTTCACGTCTCTCTaGAGCTGCACAGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKCFTSL*SCTVEI
Trigger: GATCTCTACTGTGCAGCTCCAGAGAGACGTGAAACA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGAGTCATTCTCTGCATTaGCCCACCCATATTTGGATG +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPSHSLH*PTHIWM
Trigger: CATCCAAATATGGGTGGGCCAATGCAGAGAATGACT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGTCATTCTCTGCATTaGCCCACCCATATTTGGATG +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGESHSLH*PTHIWM
Trigger: CATCCAAATATGGGTGGGCCAATGCAGAGAATGACT...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAAGTCATTCTCTGCATTaGCCCACCCATATTTGGATG +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERASHSLH*PTHIWM
Trigger: CATCCAAATATGGGTGGGCCAATGCAGAGAATGACT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAGGTCTACCACCACCTaGACCCATGTTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMRSTTT*THVHSR
Trigger: CCTGGAATGAACATGGGTCCAGGTGGTGGTAGACCT...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTTCGCCATCATCCCTTaGAGTGCCCGGTTGATTACT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSFAIIP*SARLIT
Trigger: AGTAATCAACCGGGCACTCCAAGGGATGATGGCGAA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGAAGAATCTCTGGAACCTaGGAGGCGGAGACGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VVYIKTNTNALIKMENTRRISGT*EAETAV
Trigger: CACTGCCGTCTCCGCCTCCCAGGTTCCAGAGATTCT...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCCTTTTGGCAAATATATaGCAACCTTGTCCCCCATAC +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESLLANI*QPCPPY
Trigger: GTATGGGGGACAAGGTTGCCATATATTTGCCAAAAG...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGACACCTCCAAGTGCCTaGTTAGGTATCCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMTPPSA*LGILNG
Trigger: CCCATTGAGGATACCTAATCAGGCACTTGGAGGTGT...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCACCCATGGGACCATCTaGCCCAGGACCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPTHGTI*PRTHWK
Trigger: TTTCCAATGGGTCCTGGGTCAGATGGTCCCATGGGT...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTCTTGGAGTGCCCGGTTaGTTACTCAGGCTCATATTA +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSLGVPG*LLRLIL
Trigger: TAATATGAGCCTGAGTAATCAACCGGGCACTCCAAG...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAAGGTTGGTTTGGTGTaGCTGAGATTCCTTTGTTTA +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESKVGLV*LRFLCL
Trigger: TAAACAAAGGAATCTCAGTCACACCAAACCAACCTT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTCTCCGTACAGTTGTTTaGATCACATTTGGACCCGCT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSLRTVV*ITFGPA
Trigger: AGCGGGTCCAAATGTGATTCAAACAACTGTACGGAG...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGATGTTGCTAAATATATaGCAACCCCGGTCACTTTAT +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRMLLNI*QPRSLY
Trigger: ATAAAGTGACCGGGGTTGTCATATATTTAGCAACAT...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAACTCCTGGTGAGAAGTaGCAAATTCAAGCAAATGCT +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERATPGEK*QIQANA
Trigger: AGCATTTGCTTGAATTTGTCACTTCTCACCAGGAGT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTACTCCTGGTGAGAAGTaGCAAATTCAAGCAAATGCT +
Preference number: 4 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFTPGEK*QIQANA
Trigger: AGCATTTGCTTGAATTTGTCACTTCTCACCAGGAGT...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAACTGTGTGTGATTAACTaGGGCTCATTTTATGATAGT +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKLCVIN*GSFYDS
Trigger: ACTATCATAAAATGAGCCTCAGTTAATCACACACAG...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGAAGCTACTCTGGAGGCTaGGGCAGGAGAATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGSYSGG*GRRISG
Trigger: TCCAGAGATTCTCCTGCCTCAGCCTCCAGAGTAGCT...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTACGTCTCTCTGGAGCTaGACAGTAGAGATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSTSLWS*TVEIPK
Trigger: TTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320672.8
ENST00000505980.5
ENST00000509053.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGACAGGACCTACTGGCATaGCATCTCCTGGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGQDLLA*HLLGEC
Trigger: ACATTCCCCCAGGAGATGGCATGCCAGTAGGTCCTG...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTGGAGGAGTCATTCTCTaGATTGGCCCACCCATATTT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSGGVIL*IGPPIF
Trigger: AAATATGGGTGGGCCAATGCAGAGAATGACTCCTCC...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAGACCACTGCTGTATATaGAGTCTGTGGTTGATTGGA +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKDHCCI*SLWLIG
Trigger: TCCAATCAACCACAGACTGCATATACAGCAGTGGTC...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGAAGATTGGGTACCATTaGTTTAAACAAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRKIGYH*FKQTQP
Trigger: AGGCTGTGTTTGTTTAAAGCAATGGTACCCAATCTT...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTGGCCCACCCATATTTaGATGTCCTTGTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSWPTHI*MSLLSS
Trigger: ACTCGACAACAAGGACATCCAAATATGGGTGGGCCA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAATGGCCCTCCACCTCCTaGAGGACCTACATAATTCCC +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKWPSTS*RTYIIP
Trigger: GGGAATTATGTAGGTCCTCCAGGAGGTGGAGGGCCA...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTCATTCAGGTTACCCTaGCTTGAGGTAAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGESFRLP*LEVKTF
Trigger: AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGGGTGACATAAAAGGCTaGAAGAACCCTGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMGDIKG*KNPGGT
Trigger: TGTACCACCAGGGTTCTTTCAGCCTTTTATGTCACC...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCACACCTCCAAGTGCCTaGTTAGGTATCCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: STLCDSQDNLHQTQFNESTPPSA*LGILNG
Trigger: CCCATTGAGGATACCTAATCAGGCACTTGGAGGTGT...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR TCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTCTCTTTATCAGCAACTaGCTCCATACTGGAACATTT +
Preference number: 4 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFLFISN*LHTGTF
Trigger: AAATGTTCCAGTATGGAGTCAGTTGCTGATAAAGAG...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GGAGCAGTTCTGAATGCTTTGCTATACATTCCTAGGGACAATATGATGAAGAAATGCCCAGGCGGCAATTaGGAAATCTTAACTTCGGAT +
Preference number: 4 (lower is better)
Translates to: GAVLNALLYIPRDNMMKKCPGGN*EILTSD
Trigger: ATCCGAAGTTAAGATTTCTCAATTGCCGCCTGGGCA...TTTCTTCATCATATTGTCCCTAGGAATGTATAGCAAAGCATTCAGAACTGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAAGGACACTTATTGAACTaGGGATTTCACTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQGHLLN*GFHFIV
Trigger: AACTATGAAGTGAAATCCTCAGTTCAATAAGTGTCC...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGACGTCTCTCTGGAGCTaGACAGTAGAGATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMTSLWS*TVEIPK
Trigger: TTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGT...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR GCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGGGAGGAGTCATTCTCTaGATTGGCCCACCCATATTT +
Preference number: 4 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMGGVIL*IGPPIF
Trigger: AAATATGGGTGGGCCAATGCAGAGAATGACTCCTCC...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR GCA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTGGAGGAGTCATTCTCTaGATTGGCCCACCCATATTT +
Preference number: 4 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTGGVIL*IGPPIF
Trigger: AAATATGGGTGGGCCAATGCAGAGAATGACTCCTCC...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAACAGTGGGGGTCTCATTaGACCTCCATAGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKQWGSH*TSIVLW
Trigger: CCACAGAACTATGGAGGTGCAATGAGACCCCCACTG...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000509053.5
CDS-3UTR GCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCCATCATCCCTTGGAGTaGCCGGTTGATTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPHHPLE*PVDYSG
Trigger: GCCTGAGTAATCAACCGGGCACTCCAAGGGATGATG...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGACATCATCCCTTGGAGTaGCCGGTTGATTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGHHPLE*PVDYSG
Trigger: GCCTGAGTAATCAACCGGGCACTCCAAGGGATGATG...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGAGGGCAATTCTAATATaGCACTCCGTACAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPRAILI*HSVQLF
Trigger: AAACAACTGTACGGAGTGGCATATTAGAATTGCCCT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAAGGGCAATTCTAATATaGCACTCCGTACAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERARAILI*HSVQLF
Trigger: AAACAACTGTACGGAGTGGCATATTAGAATTGCCCT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTGACCACTGCTGTATATaGAGTCTGTGGTTGATTGGA +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSDHCCI*SLWLIG
Trigger: TCCAATCAACCACAGACTGCATATACAGCAGTGGTC...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGACATGTATTTTCAAATaGAGTGAGTTAGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRTCIFK*SELGRM
Trigger: CATTCTGCCTAACTCACTGCATTTGAAAATACATGT...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTTGTTTCACGTCTCTCTaGAGCTGCACAGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTCFTSL*SCTVEI
Trigger: GATCTCTACTGTGCAGCTCCAGAGAGACGTGAAACA...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTAGTCATTCTCTGCATTaGCCCACCCATATTTGGATG +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSSHSLH*PTHIWM
Trigger: CATCCAAATATGGGTGGGCCAATGCAGAGAATGACT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAAGGTCTACCACCACCTaGACCCATGTTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKRSTTT*THVHSR
Trigger: CCTGGAATGAACATGGGTCCAGGTGGTGGTAGACCT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAATGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQCLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAATTTTACAATGTCCTGTaGGTCAATGTATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: SIPEASGVLITLFSLVLKFYNVL*VNVCMC
Trigger: ACACATACATACATTGACCCACAGGACATTGTAAAA...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTCAACTGACTCCATACTaGAACATTTTCAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFQLTPY*NIFKGV
Trigger: CACTCCTTTGAAAATGTTCCAGTATGGAGTCAGTTG...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATTATTTCTCAAGGTATaGTTCACAGACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKLFLKV*FTDPGR
Trigger: TCTCCCTGGGTCTGTGAACCATACCTTGAGAAATAA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR CAA 72 bp CAGTTTAGGGCAATTCTAATATGCCACTCCGTACAGTaGTTTGAATCACATTTGGACCCGCTTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: QFRAILICHSVQ*FESHLDPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCTAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
3UTR CAA 72 bp GAAGATTCAACTACTTTTGGCAAATATATGGCAACCTaGTCCCCCATACTGGATTACTCCCTCCCATACTAT +
Preference number: 4 (lower is better)
Translates to: EDSTTFGKYMAT*SPILDYSLPYY
Trigger: ATAGTATGGGAGGGAGTAATCCAGTATGGGGGACAAGGTTGCCATATATTTGCCAAAAGTAGTTGAATCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCTCCAGGGTACCGAGGTaGCATAAAAGGCTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: STLCDSQDNLHQTQFNESSRVPR*HKRLKE
Trigger: TTCTTTCAGCCTTTTATGTCACCTCGGTACCCTGGA...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCCTTGGAGTGCCCGGTTaGTTACTCAGGCTCATATTA +
Preference number: 4 (lower is better)
Translates to: STLCDSQDNLHQTQFNESLGVPG*LLRLIL
Trigger: TAATATGAGCCTGAGTAATCAACCGGGCACTCCAAG...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAAGGTTGGTTTGGTGTaGCTGAGATTCCTTTGTTTA +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKKVGLV*LRFLCL
Trigger: TAAACAAAGGAATCTCAGTCACACCAAACCAACCTT...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR TCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCTGTGTGTGATTAACTaGGGCTCATTTTATGATAGT +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGELCVIN*GSFYDS
Trigger: ACTATCATAAAATGAGCCTCAGTTAATCACACACAG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACCTGAATACTGTGTGTaGTTAACTGAGGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKPEYCV*LTEAHF
Trigger: AAAATGAGCCTCAGTTAATCACACACAGTATTCAGG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGGGCAATTCTAATATaGCACTCCGTACAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKRAILI*HSVQLF
Trigger: AAACAACTGTACGGAGTGGCATATTAGAATTGCCCT...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR GCA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAAATTCACAGGATAACTTaGATCAGACGCAATTTAATG +
Preference number: 4 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQIHRIT*IRRNLM
Trigger: CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAAT...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACTGTCTTCCATTCAGTaGATGAAAGAATTATCTGGA +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERALSSIQ*MKELSG
Trigger: TCCAGATAATTCTTTCATGCACTGAATGGAAGACAG...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGACGGTTCCAGGACCTCTaGAGATACCAAAATCCACAG +
Preference number: 4 (lower is better)
Translates to: VVYIKTNTNALIKMENTRRFQDL*RYQNPQ
Trigger: CTGTGGATTTTGGTATCTGCAGAGGTCCTGGAACCG...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAGTCATTCTCTGCATTaGCCCACCCATATTTGGATG +
Preference number: 4 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMSHSLH*PTHIWM
Trigger: CATCCAAATATGGGTGGGCCAATGCAGAGAATGACT...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CCA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: VQLFESHLDPLSSQKRGECLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: RAILICHSVQLFESHLDPCLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERACLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTTTTACAATGTCCTGTaGGTCAATGTATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: QLFESHLDPLSSQKRGESFYNVL*VNVCMC
Trigger: ACACATACATACATTGACCCACAGGACATTGTAAAA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTAGATATAGACAGATGTaGGACTTCTTCATGCCCCAA +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSRYRQM*DFFMPQ
Trigger: TTGGGGCATGAAGAAGTCCCACATCTGTCTATATCT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCTCCAGGGTACCGAGGTaGCATAAAAGGCTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPSRVPR*HKRLKE
Trigger: TTCTTTCAGCCTTTTATGTCACCTCGGTACCCTGGA...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAGATAAGTATACATTCTaGGAAATGCATTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKDKYTF*EMHCQA
Trigger: TGCCTGACAATGCATTTCTCAGAATGTATACTTATC...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCGCACTCCTAGGCACCTaGATACTGTGTGTGATTAAC +
Preference number: 4 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPALLGT*ILCVIN
Trigger: GTTAATCACACACAGTATTCAGGTGCCTAGGAGTGC...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGAGCACTCCTAGGCACCTaGATACTGTGTGTGATTAAC +
Preference number: 4 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGALLGT*ILCVIN
Trigger: GTTAATCACACACAGTATTCAGGTGCCTAGGAGTGC...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTGTATTACAAGATCAATaGCACCCTACAGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSVLQDQ*HPTAFV
Trigger: AACAAAGGCTGTAGGGTGTCATTGATCTTGTAATAC...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTTTATCAGGAGTTGATTaGATCAGGGATGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTLSGVD*IRDVEP
Trigger: AGGTTCCACATCCCTGATTCAATCAACTCCTGATAA...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAACGTCTCTCTGGAGCTaGACAGTAGAGATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKTSLWS*TVEIPK
Trigger: TTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAATGTTTCACGTCTCTCTaGAGCTGCACAGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKCFTSL*SCTVEI
Trigger: GATCTCTACTGTGCAGCTCCAGAGAGACGTGAAACA...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKCLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATTTTACAATGTCCTGTaGGTCAATGTATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAFYNVL*VNVCMC
Trigger: ACACATACATACATTGACCCACAGGACATTGTAAAA...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CCA 90 bp CTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGTAAAGACCTTTTTTTACAATGTCCTGTaGGTCAATGTATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: LDKLSPSFRLPWLEVKTFFYNVL*VNVCMC
Trigger: ACACATACATACATTGACCCACAGGACATTGTAAAA...AAAGGTCTTTACCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATGTATATGCAGTCTGTaGTTGATTGGAATGTCATTA +
Preference number: 4 (lower is better)
Translates to: SCLNHIWTRFLHKRGERACICSL*LIGMSL
Trigger: TAATGACATTCCAATCAACCACAGACTGCATATACA...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCGGCACTTTTCATGGCTaGGGGAGCAGAATTGATTTA +
Preference number: 4 (lower is better)
Translates to: STLCDSQDNLHQTQFNESGTFHG*GSRIDL
Trigger: TAAATCAATTCTGCTCCCCCAGCCATGAAAAGTGCC...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTCAGGTGTCTTTTTCATaGGTAGGTCACCTTATCAAT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSQVSFS*VGHLIN
Trigger: ATTGATAAGGTGACCTACCCATGAAAAAGACACCTG...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR CAA 72 bp AAAACTTCCCCAGCCAAAGGAGCAGTTCTGAATGCTTaGCTATACATTCCTAGGGACAATATGATGAAGAAA +
Preference number: 4 (lower is better)
Translates to: KTSPAKGAVLNA*LYIPRDNMMKK
Trigger: TTTCTTCATCATATTGTCCCTAGGAATGTATAGCAAAGCATTCAGAACTGCTCCTTTGGCTGGGGAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GGAGCAGTTCTGAATGCTTTGCTATACATTCCTAGGGACAATATGATGAAGAAAAAAAAGAGGAAAACCTaGTCAAGCATAGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GAVLNALLYIPRDNMMKKKKRKT*SSIVAH
Trigger: ATGAGCCACTATGCTTGATCAGGTTTTCCTCTTTTT...TTTCTTCATCATATTGTCCCTAGGAATGTATAGCAAAGCATTCAGAACTGCTCC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTGGCTGAGAATTAAATaGTCACTTATGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSWLRIK*SLMPLS
Trigger: AGATAAGGGCATAAGTGATCATTTAATTCTCAGCCA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAACTCTTGGCAATGTACTaGGGCCATTTGGTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKLLAMY*GHLVEK
Trigger: TTTTTCCACCAAATGGCCTCAGTACATTGCCAAGAG...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTGCTGGTGGCCATCGTTaGATTAAGAATAGTAGATTA +
Preference number: 4 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTAGGHR*IKNSRL
Trigger: TAATCTACTATTCTTAATTCAACGATGGCCACCAGC...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAAGTCATTCTCTGCATTaGCCCACCCATATTTGGATG +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKSHSLH*PTHIWM
Trigger: CATCCAAATATGGGTGGGCCAATGCAGAGAATGACT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTGTTTGAATCACATTTaGACCCGCTTTCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSCLNHI*TRFLHK
Trigger: TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CCA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATTTTACAATGTCCTGTaGGTCAATGTATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKFYNVL*VNVCMC
Trigger: ACACATACATACATTGACCCACAGGACATTGTAAAA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCAGCAAGCAAGATACCTaGATAGAAAAGCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: STLCDSQDNLHQTQFNESSKQDT*IEKQHS
Trigger: GGAATGCTGCTTTTCTATCCAGGTATCTTGCTTGCT...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CCA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTGTATTTTATTTCTCCTaGAAGATGCAGGGATTGGGA +
Preference number: 4 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTVFYFS*KMQGLG
Trigger: TCCCAATCCCTGCATCTTCCAGGAGAAATAAAATAC...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR TCA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTGATAAGTATACATTCTaGGAAATGCATTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTDKYTF*EMHCQA
Trigger: TGCCTGACAATGCATTTCTCAGAATGTATACTTATC...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAACCAAAGGAGCAGTTCTaGATGCTTTGCTATACATTC +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKPKEQF*MLCYTF
Trigger: GAATGTATAGCAAAGCATTCAGAACTGCTCCTTTGG...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTCTGTCTTCCATTCAGTaGATGAAAGAATTATCTGGA +
Preference number: 4 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTLSSIQ*MKELSG
Trigger: TCCAGATAATTCTTTCATGCACTGAATGGAAGACAG...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGAACAGGAGACTCCATCTaGGTATGTCTTGTATTACTC +
Preference number: 4 (lower is better)
Translates to: VVYIKTNTNALIKMENTRTGDSI*VCLVLL
Trigger: GAGTAATACAAGACATACGCAGATGGAGTCTCCTGT...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAATAAATGCAGTAATGTaGACATGCACGCACACACAC +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKINAVM*TCTHTH
Trigger: GTGTGTGTGCGTGCATGTGCACATTACTGCATTTAT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CCA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTTTTACAATGTCCTGTaGGTCAATGTATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: ILICHSVQLFESHLDPLSFYNVL*VNVCMC
Trigger: ACACATACATACATTGACCCACAGGACATTGTAAAA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAAACAAACACAGCCTCTaGCTCCTCATAGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKNKHSL*LLIANN
Trigger: ATTGTTTGCTATGAGGAGCCAGAGGCTGTGTTTGTT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320672.8
3UTR CAA 72 bp CTCCTGGTGAGAAGTGACAAATTCAAGCAAATGCTTTaGTTATCACTTTTGGGCTTCATCATGTTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LLVRSDKFKQML*LSLLGFIMLKR
Trigger: TCTCTTTAACATGATGAAGCCCAAAAGTGATAACAAAAGCATTTGCTTGAATTTGTCACTTCTCACCAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGAGTAGTTTTAGCCTGCTaGAGTCAATGGCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGVVLAC*SQWLDK
Trigger: TTTATCTAGCCATTGACTTCAGCAGGCTAAAACTAC...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGATATGCAGTCTGTGGTTaGTTGGAATGTCATTATGAG +
Preference number: 4 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGYAVCG*LECHYE
Trigger: CTCATAATGACATTCCAATCAACCACAGACTGCATA...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGACCTGAATACTGTGTGTaGTTAACTGAGGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGPEYCV*LTEAHF
Trigger: AAAATGAGCCTCAGTTAATCACACACAGTATTCAGG...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGAATGTTGCTAAATATATaGCAACCCCGGTCACTTTAT +
Preference number: 4 (lower is better)
Translates to: VVYIKTNTNALIKMENTRMLLNI*QPRSLY
Trigger: ATAAAGTGACCGGGGTTGTCATATATTTAGCAACAT...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGATGCAGCAAGAATTGCTaGTATTATTACTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGCSKNC*YYYCEM
Trigger: CATCTCACAGTAATAATATCAGCAATTCTTGCTGCA...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR TCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGATGCAGCAAGAATTGCTaGTATTATTACTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: VVYIKTNTNALIKMENTRCSKNC*YYYCEM
Trigger: CATCTCACAGTAATAATATCAGCAATTCTTGCTGCA...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCCAAGACCAACACGAATaGATTGATAAAGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: STLCDSQDNLHQTQFNESQDQHE*IDKDGK
Trigger: TTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTG...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR GCA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCACATGTATTTTCAAATaGAGTGAGTTAGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: STLCDSQDNLHQTQFNESTCIFK*SELGRM
Trigger: CATTCTGCCTAACTCACTGCATTTGAAAATACATGT...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
3UTR CAA 72 bp AAATGCATTCCAAAATCAAAATCAAGTGGCTATGATTaGTGGCACTCCTTCGAATTAGCAGTGATAATCAAG +
Preference number: 4 (lower is better)
Translates to: KCIPKSKSSGYD*WHSFELAVIIK
Trigger: CTTGATTATCACTGCTAATTCGAAGGAGTGCCACAAATCATAGCCACTTGATTTTGATTTTGGAATGCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR GCA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAATTCACAGGATAACTTaGATCAGACGCAATTTAATG +
Preference number: 4 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKIHRIT*IRRNLM
Trigger: CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAAT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR GCA 90 bp GTAGTATACATCAAGACCAACACGAATGCATTGATAAAGATGGAAAACACAAGAATTCACAGGATAACTTaGATCAGACGCAATTTAATG +
Preference number: 4 (lower is better)
Translates to: VVYIKTNTNALIKMENTRIHRIT*IRRNLM
Trigger: CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAAT...TCTTGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGTCTTGATGTATACTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS TCA 90 bp CAGCTCCGGTCTACACCTCCCAGCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGG +
Preference number: 5 (lower is better)
Translates to: QLRSTPPSVSDAEDG*FLHFHLRYRVHLTR
Trigger: CCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGGTGTAGACCGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507968.1
CDS-3UTR CAA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGCAGCCACCCCCACTATaGGCCGCCCCACGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRQPPPL*AAPRQS
Trigger: GCTTTGGCGTGGGGCGGCCAATAGTGGGGGTGGCTG...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp TTTCAAAGACAGAGAACTACAGTTGTCCCTCCGTATCCAAGGGAGACCGGTTCCGGTGATCTGCCCACCTaGGCCTCCCAAGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: FQRQRTTVVPPYPRETGSGDLPT*ASQVLG
Trigger: TCCCAGCACTTGGGAGGCCAAGGTGGGCAGATCACC...GGAACCGGTCTCCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTCTTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTCAGCCACCCCCACTATaGGCCGCCCCACGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSQPPPL*AAPRQS
Trigger: GCTTTGGCGTGGGGCGGCCAATAGTGGGGGTGGCTG...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTCAGCCACCCCCACTATaGGCCGCCCCACGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTQPPPL*AAPRQS
Trigger: GCTTTGGCGTGGGGCGGCCAATAGTGGGGGTGGCTG...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCTTTGCCGTACATGCTaGTGCCGAGAGCAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGELCRTC*CREQLP
Trigger: TGGGAGCTGCTCTCGGCACAAGCATGTACGGCAAAG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACTTTGCCGTACATGCTaGTGCCGAGAGCAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKLCRTC*CREQLP
Trigger: TGGGAGCTGCTCTCGGCACAAGCATGTACGGCAAAG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320672.8
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAATTTCGCCATCATCCCTaGGAGTGCCCGGTTGATTAC +
Preference number: 5 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQFRHHP*ECPVDY
Trigger: GTAATCAACCGGGCACTCCAAGGGATGATGGCGAAA...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTTTCGCCATCATCCCTaGGAGTGCCCGGTTGATTAC +
Preference number: 5 (lower is better)
Translates to: QLFESHLDPLSSQKRGESFRHHP*ECPVDY
Trigger: GTAATCAACCGGGCACTCCAAGGGATGATGGCGAAA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AAGTCAGGTGTCTGGACAAACTATCACCTTCATTCAGGTTACCCTGGCTTGAGGGAGTCATTCTCTGCATaGGCCCACCCATATTTGGAT +
Preference number: 5 (lower is better)
Translates to: KSGVWTNYHLHSGYPGLRESFSA*AHPYLD
Trigger: ATCCAAATATGGGTGGGCCAATGCAGAGAATGACTC...CCTCAAGCCAGGGTAACCTGAATGAAGGTGATAGTTTGTCCAGACACCTGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCCCTTGGAGTGCCCGGTaGATTACTCAGGCTCATATT +
Preference number: 5 (lower is better)
Translates to: QLFESHLDPLSSQKRGESPWSAR*ITQAHI
Trigger: AATATGAGCCTGAGTAATCAACCGGGCACTCCAAGG...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATTTCGCCATCATCCCTaGGAGTGCCCGGTTGATTAC +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAFRHHP*ECPVDY
Trigger: GTAATCAACCGGGCACTCCAAGGGATGATGGCGAAA...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTTTCGCCATCATCCCTaGGAGTGCCCGGTTGATTAC +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPFRHHP*ECPVDY
Trigger: GTAATCAACCGGGCACTCCAAGGGATGATGGCGAAA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTTTCGCCATCATCCCTaGGAGTGCCCGGTTGATTAC +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEFRHHP*ECPVDY
Trigger: GTAATCAACCGGGCACTCCAAGGGATGATGGCGAAA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAGACACCCTACAGCCTTaGTTCCCATGGGCAACTTTG +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERADTLQP*FPWATL
Trigger: CAAAGTTGCCCATGGGAACAAAGGCTGTAGGGTGTC...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCGAGTCATTCTCTGCATaGGCCCACCCATATTTGGAT +
Preference number: 5 (lower is better)
Translates to: QLFESHLDPLSSQKRGESESFSA*AHPYLD
Trigger: ATCCAAATATGGGTGGGCCAATGCAGAGAATGACTC...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACCTTGGAGTGCCCGGTaGATTACTCAGGCTCATATT +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAPWSAR*ITQAHI
Trigger: AATATGAGCCTGAGTAATCAACCGGGCACTCCAAGG...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCCTTGGAGTGCCCGGTaGATTACTCAGGCTCATATT +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPPWSAR*ITQAHI
Trigger: AATATGAGCCTGAGTAATCAACCGGGCACTCCAAGG...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCCTTGGAGTGCCCGGTaGATTACTCAGGCTCATATT +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEPWSAR*ITQAHI
Trigger: AATATGAGCCTGAGTAATCAACCGGGCACTCCAAGG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACTCCGTACAGTTGTTaGAATCACATTTGGACCCGC +
Preference number: 5 (lower is better)
Translates to: QLFESHLDPLSSQKRGESTPYSC*NHIWTR
Trigger: GCGGGTCCAAATGTGATTCAAACAACTGTACGGAGT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATTTGGATGTCCTTGTaGTCGAGTTGGATCCATTCC +
Preference number: 5 (lower is better)
Translates to: QLFESHLDPLSSQKRGESIWMSL*SSWIHS
Trigger: GGAATGGATCCAACTCGACAACAAGGACATCCAAAT...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGGAGTCATTCTCTGCATaGGCCCACCCATATTTGGAT +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPESFSA*AHPYLD
Trigger: ATCCAAATATGGGTGGGCCAATGCAGAGAATGACTC...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAGAGTCATTCTCTGCATaGGCCCACCCATATTTGGAT +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAESFSA*AHPYLD
Trigger: ATCCAAATATGGGTGGGCCAATGCAGAGAATGACTC...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTTTCGCCATCATCCCTaGGAGTGCCCGGTTGATTAC +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSFRHHP*ECPVDY
Trigger: GTAATCAACCGGGCACTCCAAGGGATGATGGCGAAA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGACTCCGTACAGTTGTTaGAATCACATTTGGACCCGC +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPTPYSC*NHIWTR
Trigger: GCGGGTCCAAATGTGATTCAAACAACTGTACGGAGT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGACTCCGTACAGTTGTTaGAATCACATTTGGACCCGC +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGETPYSC*NHIWTR
Trigger: GCGGGTCCAAATGTGATTCAAACAACTGTACGGAGT...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAACTCCGTACAGTTGTTaGAATCACATTTGGACCCGC +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERATPYSC*NHIWTR
Trigger: GCGGGTCCAAATGTGATTCAAACAACTGTACGGAGT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTGCCACTCCGTACAGTaGTTTGAATCACATTTGGAC +
Preference number: 5 (lower is better)
Translates to: QLFESHLDPLSSQKRGESCHSVQ*FESHLD
Trigger: GTCCAAATGTGATTCAAACAACTGTACGGAGTGGCA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAACAGGCAATATTGTCCTaGTCTGAACATCATAGAGTG +
Preference number: 5 (lower is better)
Translates to: SIPEASGVLITLFSLVLKQAILS*SEHHRV
Trigger: CACTCTATGATGTTCAGACAAGGACAATATTGCCTG...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAGTGCCCAGGCGGCAATaGAGAAATCTTAACTTCGGA +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKVPRRQ*RNLNFG
Trigger: TCCGAAGTTAAGATTTCTCAATTGCCGCCTGGGCAC...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAATCAAGTGGCTATGATTaGTGGCACTCCTTCGAATTA +
Preference number: 5 (lower is better)
Translates to: SIPEASGVLITLFSLVLKSSGYD*WHSFEL
Trigger: TAATTCGAAGGAGTGCCACAAATCATAGCCACTTGA...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAATTTGGATGTCCTTGTaGTCGAGTTGGATCCATTCC +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAIWMSL*SSWIHS
Trigger: GGAATGGATCCAACTCGACAACAAGGACATCCAAAT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGATTTGGATGTCCTTGTaGTCGAGTTGGATCCATTCC +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPIWMSL*SSWIHS
Trigger: GGAATGGATCCAACTCGACAACAAGGACATCCAAAT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCCTGAGGAGTATGGTATaGAATTGGCATTTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: QLFESHLDPLSSQKRGESLRSMV*NWHLLG
Trigger: ACCCAACAAATGCCAATTCAATACCATACTCCTCAG...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAACTCCGTACAGTTGTTaGAATCACATTTGGACCCGC +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKTPYSC*NHIWTR
Trigger: GCGGGTCCAAATGTGATTCAAACAACTGTACGGAGT...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTGCCACTCCGTACAGTaGTTTGAATCACATTTGGAC +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGECHSVQ*FESHLD
Trigger: GTCCAAATGTGATTCAAACAACTGTACGGAGTGGCA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTGCCACTCCGTACAGTaGTTTGAATCACATTTGGAC +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPCHSVQ*FESHLD
Trigger: GTCCAAATGTGATTCAAACAACTGTACGGAGTGGCA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGGACAGAGAACTACAGTaGTCCCTCCGTATCCAAGGG +
Preference number: 5 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMDRELQ*SLRIQG
Trigger: CCCTTGGATACGGAGGGACAACTGTAGTTCTCTGTC...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp GTTCAGTTGGTATTTTATTTCTCCTGGAAGATGCAGGGATTGGGAGGGAGGCAAAAATATATGGCAACCTaGTCCCCCATACTGGATTAC +
Preference number: 5 (lower is better)
Translates to: VQLVFYFSWKMQGLGGRQKYMAT*SPILDY
Trigger: GTAATCCAGTATGGGGGACAAGGTTGCCATATATTT...TTGCCTCCCTCCCAATCCCTGCATCTTCCAGGAGAAATAAAATACCAACTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAATTTGGATGTCCTTGTaGTCGAGTTGGATCCATTCC +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKIWMSL*SSWIHS
Trigger: GGAATGGATCCAACTCGACAACAAGGACATCCAAAT...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCATATTTGGATGTCCTaGTTGTCGAGTTGGATCCAT +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEHIWMS*LSSWIH
Trigger: ATGGATCCAACTCGACAACAAGGACATCCAAATATG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTGAGTCATTCTCTGCATaGGCCCACCCATATTTGGAT +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSESFSA*AHPYLD
Trigger: ATCCAAATATGGGTGGGCCAATGCAGAGAATGACTC...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAGAGTATGGTATTGAATaGGCATTTGTTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAEYGIE*AFVGFG
Trigger: GCCAAACCCAACAAATGCCAATTCAATACCATACTC...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGGAGTATGGTATTGAATaGGCATTTGTTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEEYGIE*AFVGFG
Trigger: GCCAAACCCAACAAATGCCAATTCAATACCATACTC...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGGAGTATGGTATTGAATaGGCATTTGTTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPEYGIE*AFVGFG
Trigger: GCCAAACCCAACAAATGCCAATTCAATACCATACTC...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGCTGAGGAGTATGGTATaGAATTGGCATTTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGELRSMV*NWHLLG
Trigger: ACCCAACAAATGCCAATTCAATACCATACTCCTCAG...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACTGAGGAGTATGGTATaGAATTGGCATTTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERALRSMV*NWHLLG
Trigger: ACCCAACAAATGCCAATTCAATACCATACTCCTCAG...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTGAGGAGTATGGTATaGAATTGGCATTTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPLRSMV*NWHLLG
Trigger: ACCCAACAAATGCCAATTCAATACCATACTCCTCAG...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCAATGTTATCACCAGAGTaGGTTGAATCTGCTGGACTA +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAMLSPE*VESAGL
Trigger: TAGTCCAGCAGATTCAACCAACTCTGGTGATAACAT...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGATGTTATCACCAGAGTaGGTTGAATCTGCTGGACTA +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGEMLSPE*VESAGL
Trigger: TAGTCCAGCAGATTCAACCAACTCTGGTGATAACAT...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGATGTTATCACCAGAGTaGGTTGAATCTGCTGGACTA +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPMLSPE*VESAGL
Trigger: TAGTCCAGCAGATTCAACCAACTCTGGTGATAACAT...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp CAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCTTGTTTGAATCACATTaGGACCCGCTTTCTTCACAA +
Preference number: 5 (lower is better)
Translates to: QLFESHLDPLSSQKRGESLFESH*DPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAA...GCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTACTCCGTACAGTTGTTaGAATCACATTTGGACCCGC +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSTPYSC*NHIWTR
Trigger: GCGGGTCCAAATGTGATTCAAACAACTGTACGGAGT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCACAGGCAATATTGTCCTaGTCTGAACATCATAGAGTG +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERAQAILS*SEHHRV
Trigger: CACTCTATGATGTTCAGACAAGGACAATATTGCCTG...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp AGCATTCCAGAGGCCTCAGGAGTGCTAATAACTCTCTTCTCCCTTGTGCTCAAAACCAACACGAATGCATaGATAAAGATGGAAAACACA +
Preference number: 5 (lower is better)
Translates to: SIPEASGVLITLFSLVLKTNTNA*IKMENT
Trigger: TGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGT...TTTGAGCACAAGGGAGAAGAGAGTTATTAGCACTCCTGAGGCCTCTGGAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAGCAGTTCTGAATGCTTaGCTATACATTCCTAGGGAC +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKAVLNA*LYIPRD
Trigger: GTCCCTAGGAATGTATAGCAAAGCATTCAGAACTGC...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACATATTTGGATGTCCTaGTTGTCGAGTTGGATCCAT +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKHIWMS*LSSWIH
Trigger: ATGGATCCAACTCGACAACAAGGACATCCAAATATG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAGAGTATGGTATTGAATaGGCATTTGTTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKEYGIE*AFVGFG
Trigger: GCCAAACCCAACAAATGCCAATTCAATACCATACTC...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAACTGAGGAGTATGGTATaGAATTGGCATTTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKLRSMV*NWHLLG
Trigger: ACCCAACAAATGCCAATTCAATACCATACTCCTCAG...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGAGCATTGTTTGAATCACATTaGGACCCGCTTTCTTCACAA +
Preference number: 5 (lower is better)
Translates to: SCLNHIWTRFLHKRGERALFESH*DPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAA...TGCTCTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAAAGAGGGGAGAGTTGTTTGAATCACATTaGGACCCGCTTTCTTCACAA +
Preference number: 5 (lower is better)
Translates to: VQLFESHLDPLSSQKRGELFESH*DPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAA...CTCTCCCCTCTTTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTGCCACTCCGTACAGTaGTTTGAATCACATTTGGAC +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSCHSVQ*FESHLD
Trigger: GTCCAAATGTGATTCAAACAACTGTACGGAGTGGCA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGATTTGGATGTCCTTGTaGTCGAGTTGGATCCATTCC +
Preference number: 5 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMIWMSL*SSWIHS
Trigger: GGAATGGATCCAACTCGACAACAAGGACATCCAAAT...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTATTTGGATGTCCTTGTaGTCGAGTTGGATCCATTCC +
Preference number: 5 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTIWMSL*SSWIHS
Trigger: GGAATGGATCCAACTCGACAACAAGGACATCCAAAT...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTCATATTTGGATGTCCTaGTTGTCGAGTTGGATCCAT +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSHIWMS*LSSWIH
Trigger: ATGGATCCAACTCGACAACAAGGACATCCAAATATG...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTGAGTATGGTATTGAATaGGCATTTGTTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSEYGIE*AFVGFG
Trigger: GCCAAACCCAACAAATGCCAATTCAATACCATACTC...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTCTGAGGAGTATGGTATaGAATTGGCATTTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSLRSMV*NWHLLG
Trigger: ACCCAACAAATGCCAATTCAATACCATACTCCTCAG...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTATGTTATCACCAGAGTaGGTTGAATCTGCTGGACTA +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSMLSPE*VESAGL
Trigger: TAGTCCAGCAGATTCAACCAACTCTGGTGATAACAT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGACCTTGGAGTGCCCGGTaGATTACTCAGGCTCATATT +
Preference number: 5 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGPWSAR*ITQAHI
Trigger: AATATGAGCCTGAGTAATCAACCGGGCACTCCAAGG...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATTGTTTGAATCACATTaGGACCCGCTTTCTTCACAA +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKLFESH*DPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTTGCCACTCCGTACAGTaGTTTGAATCACATTTGGAC +
Preference number: 5 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTCHSVQ*FESHLD
Trigger: GTCCAAATGTGATTCAAACAACTGTACGGAGTGGCA...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp AGGGCAATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGTTCAAGCAAATGCTTTaGTTATCACTTTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: RAILICHSVQLFESHLDPFKQML*LSLLGF
Trigger: GAAGCCCAAAAGTGATAACAAAAGCATTTGCTTGAA...CGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAATTGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTATGCTAGGGGAGTACTaGGAAATACTGTCCATATCT +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSMLGEY*EILSIS
Trigger: AGATATGGACAGTATTTCCAAGTACTCCCCTAGCAT...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509053.5
CDS-3UTR CAA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCATTTGGATGTCCTTGTaGTCGAGTTGGATCCATTCC +
Preference number: 5 (lower is better)
Translates to: STLCDSQDNLHQTQFNESIWMSL*SSWIHS
Trigger: GGAATGGATCCAACTCGACAACAAGGACATCCAAAT...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTCATATTTGGATGTCCTaGTTGTCGAGTTGGATCCAT +
Preference number: 5 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTHIWMS*LSSWIH
Trigger: ATGGATCCAACTCGACAACAAGGACATCCAAATATG...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGAGAGTCATTCTCTGCATaGGCCCACCCATATTTGGAT +
Preference number: 5 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGESFSA*AHPYLD
Trigger: ATCCAAATATGGGTGGGCCAATGCAGAGAATGACTC...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTATGTTATCACCAGAGTaGGTTGAATCTGCTGGACTA +
Preference number: 5 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTMLSPE*VESAGL
Trigger: TAGTCCAGCAGATTCAACCAACTCTGGTGATAACAT...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTTGTTTGAATCACATTaGGACCCGCTTTCTTCACAA +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSLFESH*DPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAA...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320672.8
ENST00000504985.5
ENST00000505980.5
ENST00000509053.5
ENST00000512923.5
ENST00000514493.5
ENST00000515395.5
ENST00000615665.4
CDS-3UTR CAA 90 bp TATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTTCACAAATTCAAGCAAATGCTTTaGTTATCACTTTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: YATPYSCLNHIWTRFLHKFKQML*LSLLGF
Trigger: GAAGCCCAAAAGTGATAACAAAAGCATTTGCTTGAA...TTTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAATGCCACTCCGTACAGTaGTTTGAATCACATTTGGAC +
Preference number: 5 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKCHSVQ*FESHLD
Trigger: GTCCAAATGTGATTCAAACAACTGTACGGAGTGGCA...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CAA 90 bp ATTCTAATATGCCACTCCGTACAGTTGTTTGAATCACATTTGGACCCGCTTTCTGATTCACAGGATAACTaGCATCAGACGCAATTTAAT +
Preference number: 5 (lower is better)
Translates to: ILICHSVQLFESHLDPLSDSQDN*HQTQFN
Trigger: ATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATC...AGAAAGCGGGTCCAAATGTGATTCAAACAACTGTACGGAGTGGCATATTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAGTCAAAATTCTTCTaGGTAAAGTCAGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMKSKFF*VKSGVW
Trigger: CCAGACACCTGACTTTACCAAGAAGAATTTTGACTT...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTGCTGGGGGAGCAGAATaGATTTACTTGTTAATCTTT +
Preference number: 5 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTAGGAE*IYLLIF
Trigger: AAAGATTAACAAGTAAATCAATTCTGCTCCCCCAGC...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAACCATCTGCGTATGTCTaGTATTACTCTTTCCATCCC +
Preference number: 5 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKPSAYV*YYSFHP
Trigger: GGGATGGAAAGAGTAATACAAGACATACGCAGATGG...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS-3UTR CAA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAACATATTTGGATGTCCTaGTTGTCGAGTTGGATCCAT +
Preference number: 5 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKHIWMS*LSSWIH
Trigger: ATGGATCCAACTCGACAACAAGGACATCCAAATATG...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGAGAGTATGGTATTGAATaGGCATTTGTTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGEYGIE*AFVGFG
Trigger: GCCAAACCCAACAAATGCCAATTCAATACCATACTC...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp ACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAATGTTATCACCAGAGTaGGTTGAATCTGCTGGACTA +
Preference number: 5 (lower is better)
Translates to: TVHFVIHRITCIRRNLMKMLSPE*VESAGL
Trigger: TAGTCCAGCAGATTCAACCAACTCTGGTGATAACAT...TTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CAA 90 bp AGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGAAAGCTTGTTTGAATCACATTaGGACCCGCTTTCTTCACAA +
Preference number: 5 (lower is better)
Translates to: STLCDSQDNLHQTQFNESLFESH*DPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAA...GCTTTCATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGAAATGCATTGTCAGGCAATATTGTCCTTGTCTGAACATCATAGAGTGTACTGATTCACAGGATAACTaGCATCAGACGCAATTTAAT +
Preference number: 5 (lower is better)
Translates to: EKCIVRQYCPCLNIIECTDSQDN*HQTQFN
Trigger: ATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATC...AGTACACTCTATGATGTTCAGACAAGGACAATATTGCCTGACAATGCATTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGGATTCACAGGATAACTaGCATCAGACGCAATTTAAT +
Preference number: 5 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMDSQDN*HQTQFN
Trigger: ATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATC...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320672.8
ENST00000509053.5
ENST00000615665.4
CDS-3UTR CAA 90 bp GAGACAGTACACTTTGTGATTCACAGGATAACTTGCATCAGACGCAATTTAATGACCAACACGAATGCATaGATAAAGATGGAAAACACA +
Preference number: 5 (lower is better)
Translates to: ETVHFVIHRITCIRRNLMTNTNA*IKMENT
Trigger: TGTGTTTTCCATCTTTATCAATGCATTCGTGTTGGT...CATTAAATTGCGTCTGATGCAAGTTATCCTGTGAATCACAAAGTGTACTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320672.8
ENST00000615665.4
CDS-3UTR CAA 90 bp GCTAATAAGATTCACCCATCAAATATGTGTTGTATTACAAGATCAATGACACCCTTGTTTGAATCACATTaGGACCCGCTTTCTTCACAA +
Preference number: 5 (lower is better)
Translates to: ANKIHPSNMCCITRSMTPLFESH*DPLSSQ
Trigger: TTGTGAAGAAAGCGGGTCCAAATGTGATTCAAACAA...GGGTGTCATTGATCTTGTAATACAACACATATTTGATGGGTGAATCTTATTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS CCA 90 bp TCTTTAGAGTCTATACCCAATTCATCACAAAGTAATGATCAAAGATaGTTTGCATACAGATACCTCTCTCTATATAAGCTGCAACACTTG +
Preference number: 5 (lower is better)
Translates to: SLESIPNSSQSNDQR*FAYRYLSLYKLQHL
Trigger: CAAGTGTTGCAGCTTATATAGAGAGAGGTATCTGTATGCAAACCATCTTTGATCATTACTTTGTGATGAATTGGGTATAGACTCTAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504136.1
CDS-3UTR CAA 90 bp AATAATACCTTCTCAGAAGGCGAAGAAAAGAATTTCAAGATCGGTAACAATGGACTGACAAATATCATATaGTGTTCTGAGTACTGTGAG +
Preference number: 5 (lower is better)
Translates to: NNTFSEGEEKNFKIGNNGLTNII*CSEYCE
Trigger: CTCACAGTACTCAGAACACAATATGATATTTGTCAG...TCCATTGTTACCGATCTTGAAATTCTTTTCTTCGCCTTCTGAGAAGGTATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320672.8
CDS GCA 72 bp AGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTaGGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCAT +
Preference number: 6 (lower is better)
Translates to: RECQTVGAGQCV*APCASRSRARH
Trigger: ATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507968.1
CDS CAA 72 bp GTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATaGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: VRTVREPKQGEA*PHLGSARGQGV
Trigger: AACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507968.1
CDS GCA 72 bp GAGGCTGGGGGAGGGGCGCCCACCATTGCCCAGGCTTaGTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACT +
Preference number: 6 (lower is better)
Translates to: EAGGGAPTIAQA*LGKQSSREART
Trigger: AGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGTGGGCGCCCCTCCCCCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507968.1
CDS TCA 72 bp CCGAATAGGAACAGCTCCGGTCTACACCTCCCAGCGTaGGCGACGCAGAAGACGGGTGATTTCTGCATTTCC +
Preference number: 6 (lower is better)
Translates to: PNRNSSGLHLPA*ATQKTGDFCIS
Trigger: GGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGGTGTAGACCGGAGCTGTTCCTATTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507968.1
CDS TCA 72 bp TCTACACCTCCCAGCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: STPPSVSDAEDG*FLHFHLRYRVH
Trigger: ATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGGTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507968.1
CDS CAA 72 bp AATACACTGGAAAATCGGGTCACTCCCACCCGAATATaGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACC +
Preference number: 6 (lower is better)
Translates to: NTLENRVTPTRI*RFSDRLKKRRT
Trigger: GGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509743.6