RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SS18L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184402

Ensembl transcript IDs: ENST00000331758.8, ENST00000370848.8, ENST00000450482.5, ENST00000491916.1, ENST00000492466.2

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAAGATGCCCTCCCACCCACCCCATCGAGGCACAGGAAGAGGCTaGCCTCCAGGGGCTGCATGTGTGTCCAGCTGTGGCGTAGCCAGT +
Preference number: 1 (lower is better)
Translates to: QKMPSHPPHRGTGRG*PPGAACVSSCGVAS
Trigger: ACTGGCTACGCCACAGCTGGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGGGTGGGAGGGCATCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 90 bp GCGCTGTCTCACGCCAGTGGTGTGCGCTCGGCGTCATACCCAGCATaGAATGAGCACGCTTCACATGCAGACGTGGCACTGGGCGAACAG +
Preference number: 1 (lower is better)
Translates to: ALSHASGVRSASYPA*NEHASHADVALGEQ
Trigger: CTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGTATGACGCCGAGCGCACACCACTGGCGTGAGACAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR GCA 90 bp GGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTaGCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGG +
Preference number: 1 (lower is better)
Translates to: GTGRTGNQHVTIHQS*RQPIRPLDEHATTR
Trigger: CCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
3UTR TCA 90 bp GTCTCACGCCAGTGGTGTGCGCTCGGCGTCATACCCAGCATGAAATaGGCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAAC +
Preference number: 1 (lower is better)
Translates to: VSRQWCALGVIPSMK*ARFTCRRGTGRTGN
Trigger: GTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGTATGACGCCGAGCGCACACCACTGGCGTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR CCA 90 bp AACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTaGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCC +
Preference number: 1 (lower is better)
Translates to: NMSQFTRAAASPSGP*MNTLPQGLQPECVS
Trigger: GGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
3UTR GCA 90 bp CACCAAAAGTATCACACCACCAAGCGCTGTCTCACGCCAGTGGTGTaGGCTCGGCGTCATACCCAGCATGAAATGAGCACGCTTCACATG +
Preference number: 1 (lower is better)
Translates to: HQKYHTTKRCLTPVV*ARRHTQHEMSTLHM
Trigger: CATGTGAAGCGTGCTCATTTCATGCTGGGTATGACGCCGAGCGCACACCACTGGCGTGAGACAGCGCTTGGTGGTGTGATACTTTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR GCA 90 bp TATCCTTTTCGTTACGTAACAGAAACTGACCCAACGCACAGAAGATaGCCTCCCACCCACCCCATCGAGGCACAGGAAGAGGCTGCCCTC +
Preference number: 1 (lower is better)
Translates to: YPFRYVTETDPTHRR*PPTHPIEAQEEAAL
Trigger: GAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGGGTGGGAGGGCATCTTCTGTGCGTTGGGTCAGTTTCTGTTACGTAACGAAAAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 90 bp CTCTCCCGTGGGAGATGTTTATCCTTTTCGTTACGTAACAGAAACTaGCCCAACGCACAGAAGATGCCCTCCCACCCACCCCATCGAGGC +
Preference number: 1 (lower is better)
Translates to: LSRGRCLSFSLRNRN*PNAQKMPSHPPHRG
Trigger: GCCTCGATGGGGTGGGTGGGAGGGCATCTTCTGTGCGTTGGGTCAGTTTCTGTTACGTAACGAAAAGGATAAACATCTCCCACGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR CCA 90 bp ATAAACGGAATTGGCGAGAGACAGGCAATGGGCAAGCTCTGGAAGTaGCCATCTGTGGCCTCTCCCGTGGGAGATGTTTATCCTTTTCGT +
Preference number: 1 (lower is better)
Translates to: INGIGERQAMGKLWK*PSVASPVGDVYPFR
Trigger: ACGAAAAGGATAAACATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGCCCATTGCCTGTCTCTCGCCAATTCCGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR CCA 90 bp TTTTGGATAAACGGAATTGGCGAGAGACAGGCAATGGGCAAGCTCTaGAAGTGGCCATCTGTGGCCTCTCCCGTGGGAGATGTTTATCCT +
Preference number: 1 (lower is better)
Translates to: FWINGIGERQAMGKL*KWPSVASPVGDVYP
Trigger: AGGATAAACATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGCCCATTGCCTGTCTCTCGCCAATTCCGTTTATCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 90 bp ACACTACAACACTGCATGAGGAGGAAAATGAGACCTAACGTCTGTTaGCGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTC +
Preference number: 1 (lower is better)
Translates to: TLQHCMRRKMRPNVC*REQVDCGVLEICPV
Trigger: GACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGTTAGGTCTCATTTTCCTCCTCATGCAGTGTTGTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 90 bp GGCTGCATGTGTGTCCAGCTGTGGCGTAGCCAGTTAAAGAAAAGTTaGCAACCCACACTACAACACTGCATGAGGAGGAAAATGAGACCT +
Preference number: 1 (lower is better)
Translates to: GCMCVQLWRSQLKKS*QPTLQHCMRRKMRP
Trigger: AGGTCTCATTTTCCTCCTCATGCAGTGTTGTAGTGTGGGTTGTCAACTTTTCTTTAACTGGCTACGCCACAGCTGGACACACATGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR GCA 90 bp GTCAGCACTTCTGAAAACTGGCCATCATTTTTCAAATTCACAATTTaGTGGATGTCAGGGAACAATAGGAAGAAGAATGAGCGTCAATTT +
Preference number: 1 (lower is better)
Translates to: VSTSENWPSFFKFTI*WMSGNNRKKNERQF
Trigger: AAATTGACGCTCATTCTTCTTCCTATTGTTCCCTGACATCCAGCAAATTGTGAATTTGAAAAATGATGGCCAGTTTTCAGAAGTGCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 90 bp GTTTGTCAATTAGCAATTAAGAACTCTCATTTCGGTGATCGAATATaGACACATACGTTTATTTTTGAGCCCTTACCAGTGTTAAGGGTT +
Preference number: 1 (lower is better)
Translates to: VCQLAIKNSHFGDRI*THTFIFEPLPVLRV
Trigger: AACCCTTAACACTGGTAAGGGCTCAAAAATAAACGTATGTGTTCATATTCGATCACCGAAATGAGAGTTCTTAATTGCTAATTGACAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR-3UTR CCA 90 bp CCACCCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCGATCTGTCCTGTCCCTaGGCACAGAATGCTCTGATG +
Preference number: 2 (lower is better)
Translates to: PPHRGTGRGCPPGAACVSDLSCP*AQNALM
Trigger: CATCAGAGCATTCTGTGCCCAGGGACAGGACAGATC...GGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR-3UTR TCA 90 bp AGTAGGTCCCAGCATGAAATGAGCACGCTTCACATGCAGACGTGGCACTGGGCGCATCCGGCCCCTGGATaGACACGCTACCACAAGGGC +
Preference number: 2 (lower is better)
Translates to: SRSQHEMSTLHMQTWHWAHPAPG*TRYHKG
Trigger: GCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATG...CGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370848.8
ENST00000492466.2
3UTR-3UTR TCA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCCATCCGGCCCCTGGATaGACACGCTACCACAAGGGC +
Preference number: 2 (lower is better)
Translates to: DVALGEQVTNMSQFTRAAHPAPG*TRYHKG
Trigger: GCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATG...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
3UTR-3UTR CCA 90 bp TCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTATCACACCACCAGCCCATCCGGCCCCTaGATGAACACGCTACCACAA +
Preference number: 2 (lower is better)
Translates to: SPCTDIQYYTQHQKYHTTSPSGP*MNTLPQ
Trigger: TTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCT...GGTGGTGTGATACTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR-3UTR TCA 90 bp TCACAAACAATTCATGTTGGCCTAAGCTTTGCTCAACATTCATATGACAGAAGAAGCCAGAGTAATCTCTaGGGGCCCACTTCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SQTIHVGLSFAQHSYDRRSQSNL*GPTSQR
Trigger: TCTCTGGGAAGTGGGCCCTCAGAGATTACTCTGGCT...TCTTCTGTCATATGAATGTTGAGCAAAGCTTAGGCCAACATGAATTGTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 72 bp TCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATaGACACGCTACCACAAGGGCTCCAGCCAGAATGTG +
Preference number: 3 (lower is better)
Translates to: SPELPPAHPAPG*TRYHKGSSQNV
Trigger: CACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
3UTR CCA 72 bp CAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTaGATGAACACGCTACCACAAGGGCTCCAGCCAGAA +
Preference number: 3 (lower is better)
Translates to: QFTRAAASPSGP*MNTLPQGLQPE
Trigger: TTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
3UTR TCA 72 bp CAGTGGTGTGCGCTCGGCGTCATACCCAGCATGAAATaGGCACGCTTCACATGCAGACGTGGCACTGGGCGA +
Preference number: 3 (lower is better)
Translates to: QWCALGVIPSMK*ARFTCRRGTGR
Trigger: TCGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGTATGACGCCGAGCGCACACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 72 bp CACGCCAGTGGTGTGCGCTCGGCGTCATACCCAGCATaGAATGAGCACGCTTCACATGCAGACGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: HASGVRSASYPA*NEHASHADVAL
Trigger: CAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGTATGACGCCGAGCGCACACCACTGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR CCA 72 bp AACGGAATTGGCGAGAGACAGGCAATGGGCAAGCTCTaGAAGTGGCCATCTGTGGCCTCTCCCGTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: NGIGERQAMGKL*KWPSVASPVGD
Trigger: ATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGCCCATTGCCTGTCTCTCGCCAATTCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR CCA 72 bp ATTGGCGAGAGACAGGCAATGGGCAAGCTCTGGAAGTaGCCATCTGTGGCCTCTCCCGTGGGAGATGTTTAT +
Preference number: 3 (lower is better)
Translates to: IGERQAMGKLWK*PSVASPVGDVY
Trigger: ATAAACATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGCCCATTGCCTGTCTCTCGCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 72 bp CACTGCATGAGGAGGAAAATGAGACCTAACGTCTGTTaGCGGGAACAGGTGGACTGTGGTGTCCTCGAGATC +
Preference number: 3 (lower is better)
Translates to: HCMRRKMRPNVC*REQVDCGVLEI
Trigger: GATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGTTAGGTCTCATTTTCCTCCTCATGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 72 bp GGGAGATGTTTATCCTTTTCGTTACGTAACAGAAACTaGCCCAACGCACAGAAGATGCCCTCCCACCCACCC +
Preference number: 3 (lower is better)
Translates to: GRCLSFSLRNRN*PNAQKMPSHPP
Trigger: GGGTGGGTGGGAGGGCATCTTCTGTGCGTTGGGTCAGTTTCTGTTACGTAACGAAAAGGATAAACATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR-3UTR CAA 90 bp GCAAGCTCTGGAAGTGGCCATCTGTGGCCTCTCCCGTGGGAGATGTTTATCCTTCCAGTTAAAGAAAAGTaGACAACCCACACTACAACA +
Preference number: 3 (lower is better)
Translates to: ASSGSGHLWPLPWEMFILPVKEK*TTHTTT
Trigger: TGTTGTAGTGTGGGTTGTCAACTTTTCTTTAACTGG...AAGGATAAACATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 72 bp TGTGTCCAGCTGTGGCGTAGCCAGTTAAAGAAAAGTTaGCAACCCACACTACAACACTGCATGAGGAGGAAA +
Preference number: 3 (lower is better)
Translates to: CVQLWRSQLKKS*QPTLQHCMRRK
Trigger: TTTCCTCCTCATGCAGTGTTGTAGTGTGGGTTGTCAACTTTTCTTTAACTGGCTACGCCACAGCTGGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR GCA 72 bp GGACTGGTATTCAACACAGGCAAGTCCTTTAATCTGTaGCTCAGTTCTTCATCTCTAAAATGGGAACTGTTA +
Preference number: 3 (lower is better)
Translates to: GLVFNTGKSFNL*LSSSSLKWELL
Trigger: TAACAGTTCCCATTTTAGAGATGAAGAACTGAGGCACAGATTAAAGGACTTGCCTGTGTTGAATACCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR TCA 72 bp TTAGCAATTAAGAACTCTCATTTCGGTGATCGAATATaGACACATACGTTTATTTTTGAGCCCTTACCAGTG +
Preference number: 3 (lower is better)
Translates to: LAIKNSHFGDRI*THTFIFEPLPV
Trigger: CACTGGTAAGGGCTCAAAAATAAACGTATGTGTTCATATTCGATCACCGAAATGAGAGTTCTTAATTGCTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTAGGCCACGGACATGGTaGCGGCGCGGGGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRARPRTW*RRGAQP
Trigger: GGGCTGAGCCCCGCGCCGCCACCATGTCCGTGGCCT...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCGCCGGTAGGGCGCCATaGGCCGCTGCCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: CRQPIRPLDEHATTRAPAAGRAP*AAAPSC
Trigger: GCATGATGGGGCAGCGGCCCATGGCGCCCTACCGGC...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCCCTGGTAGTGCTGGCTaGCGCCCTGCGCCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CRQPIRPLDEHATTRAPAPGSAG*RPAPSC
Trigger: ACAGCTCGGCGCAGGGCGGCAGCCAGCACTACCAGG...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTGGCGCCATGGGCCGCTaGCCCATCATGCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRAGAMGR*PIMLLP
Trigger: GGGGAGCAGCATGATGGGGCAGCGGCCCATGGCGCC...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCGAAGGCCACGGACATaGTGGCGGCGCGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRARRPRT*WRRGAQ
Trigger: CTGAGCCCCGCGCCGCCACCATGTCCGTGGCCTTCG...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CCACCCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCAGTACTGCTGGCCCATaGGCTCCGCGGCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PPHRGTGRGCPPGAACVSSTAGP*APRRPG
Trigger: GCCAGGGCGCCGCGGAGCCCATGGGCCAGCAGTACT...GGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTTGCGCGGCACCCTGCTaGTACCCGGCCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRACAAPC*YPACCW
Trigger: CCAGCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCA...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CCACCCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCGCCGCTGCCCCATCATaGTGCTCCCCTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PPHRGTGRGCPPGAACVSAAAPS*CSPGCP
Trigger: AGGGCAGCCAGGGGAGCAGCATGATGGGGCAGCGGC...GGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp GCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCATGCTGGTACCCGGCCTaGTGCTGGCTGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: AASPSGPWMNTLPQGLQPCWYPA*CWLYWE
Trigger: CTCCCAGTACAGCCAGCAGCAGGCCGGGTACCAGCA...TGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCTGCTGGTACCCGGCCTaGTGCTGGCTGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: CRQPIRPLDEHATTRAPACWYPA*CWLYWE
Trigger: CTCCCAGTACAGCCAGCAGCAGGCCGGGTACCAGCA...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTAGTGCAGGCCCTGGCTaGAGCCGCTCTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRASAGPG*SRSESG
Trigger: CCCTGACTCAGAGCGGCTCCAGCCAGGGCCTGCACT...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp CCACCCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCGGCCCGTTGCCAATCTaGCCCTGCAGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPHRGTGRGCPPGAACVSGPLPI*PCRREE
Trigger: CTCCTCCCTCCTGCAGGGCCAGATTGGCAACGGGCC...GGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCAGCTGCGCCGTCTGCTGCATaGACACGTGGCTCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: PIEAQEEAALQGLHVCPAAPSAA*TRGSAR
Trigger: ACGGGCCGAGCCACGTGTCCATGCAGCAGACGGCGC...AGCTGGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCTCTGCTGGTACTGCGTaGACTCGGCCGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: CRQPIRPLDEHATTRAPASAGTA*TRPSCP
Trigger: AGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGA...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCTCCTGGCCCAGGTACTaGTGGGAAGAGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CRQPIRPLDEHATTRAPASWPRY*WEEPCW
Trigger: CCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCAGGA...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTGAGTACGTCTGCTGCTaGGCGGCACCCTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRAEYVCC*AAPCWY
Trigger: GTACCAGCAGGGTGCCGCGCAGCAGCAGACGTACTC...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCTGGCTGGGGTACTGCTaGTGGGAGTACGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CRQPIRPLDEHATTRAPAWLGYC*WEYVCC
Trigger: GCAGCAGACGTACTCCCAGCAGCAGTACCCCAGCCA...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTACAATTCACCAGAGCTaGCGCCAGCCCATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRATIHQS*RQPIRP
Trigger: GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGT...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp TCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCCGCCGGTAGGGCGCCATaGGCCGCTGCCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: SGPWMNTLPQGLQPECVSAGRAP*AAAPSC
Trigger: GCATGATGGGGCAGCGGCCCATGGCGCCCTACCGGC...GGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR TCA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCTGGCTGGAGCCGCTCTaGGTCAGGGCTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPWLEPL*VRAPGP
Trigger: GGGCCCTGGAGCCCTGACTCAGAGCGGCTCCAGCCA...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR TCA 90 bp GTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGGTAGCCGGGGTACTGTaGCGGGGCTCCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VTNMSQFTRAAASPSGPWVAGVL*RGSLGR
Trigger: TCTGCCCAGGGAGCCCCGTCACAGTACCCCGGCTAC...CCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp TCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCCGCTGCCCCATCATGCTaGTCCCCTGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SGPWMNTLPQGLQPECVSAAPSC*SPGCPA
Trigger: GGCAGGGCAGCCAGGGGAGCAGCATGATGGGGCAGC...GGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCGGCGCCATGGGCCGCTaGCCCATCATGCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPGAMGR*PIMLLP
Trigger: GGGGAGCAGCATGATGGGGCAGCGGCCCATGGCGCC...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTTGGCCCAGGTACTGCTaGGAAGAGCCTTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRAWPRYC*EEPCWE
Trigger: CTCCCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCA...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGGCTCCGCGGCGCCCTaGCTGTGGCTGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDGSAAP*LWLYCS
Trigger: CGAGCAGTACAGCCACAGCCAGGGCGCCGCGGAGCC...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCTGGGGTACTGCTGCTaGGAGTACGTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRALGYCC*EYVCCC
Trigger: GCAGCAGCAGACGTACTCCCAGCAGCAGTACCCCAG...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTGCTGTCTCACGCCAGTaGTGTGCGCTCGGCGTCATA +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRAAVSRQ*CALGVI
Trigger: TATGACGCCGAGCGCACACCACTGGCGTGAGACAGC...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGTCACTCAGGCTGCCCTaGGAGTGCAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VTNMSQFTRAAASPSGPWSLRLP*ECRPWL
Trigger: CAGCCAGGGCCTGCACTCTCAGGGCAGCCTGAGTGA...CCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR TCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGCATCCGGCCCCTGGATaGACACGCTACCACAAGGGC +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMHPAPG*TRYHKG
Trigger: GCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATG...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCAGCTGTGTTAGGCGCCGTCTaGTGCATGGACACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PIEAQEEAALQGLHVCPAVLGAV*CMDTWL
Trigger: GAGCCACGTGTCCATGCAGCAGACGGCGCCTAACAC...AGCTGGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp CCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGCTCCCCTGGCTGCCCTaGCCCATCATGGCGATGGAC +
Preference number: 4 (lower is better)
Translates to: PSGPWMNTLPQGLQPECVLPWLP*PIMAMD
Trigger: GTCCATCGCCATGATGGGGCAGGGCAGCCAGGGGAG...CACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp ACGTCTGTTGACGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTCCTGCTGCGCGGCACCCTaGTGGTACCCGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TSVDGNRWTVVSSRSVLSCCAAP*WYPACC
Trigger: GCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCAGCA...GGACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp AGTAGGTCCCAGCATGAAATGAGCACGCTTCACATGCAGACGTGGCACTGGGCGTGCTGCGCGGCACCCTaGTGGTACCCGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRSQHEMSTLHMQTWHWACCAAP*WYPACC
Trigger: GCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCAGCA...CGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACCTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCTGCTGCGCGGCACCCTaGTGGTACCCGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VALGEQVTNMSQFTRAAACCAAP*WYPACC
Trigger: GCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCAGCA...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTGGGAGTACGTCTGCTaGTGCGCGGCACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSGPWMNTLPQGLQPECVWEYVC*CAAPCW
Trigger: CCAGCAGGGTGCCGCGCAGCAGCAGACGTACTCCCA...CACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp ACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGTGGGAGTACGTCTGCTaGTGCGCGGCACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TNMSQFTRAAASPSGPWMWEYVC*CAAPCW
Trigger: CCAGCAGGGTGCCGCGCAGCAGCAGACGTACTCCCA...CATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCGCGCCGTCTGCTGCATaGACACGTGGCTCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPAPSAA*TRGSAR
Trigger: ACGGGCCGAGCCACGTGTCCATGCAGCAGACGGCGC...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGCCGGTAGGGCGCCATaGGCCGCTGCCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSAGRAP*AAAPSC
Trigger: GCATGATGGGGCAGCGGCCCATGGCGCCCTACCGGC...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCGGCTCCGCGGCGCCCTaGCTGTGGCTGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: VALGEQVTNMSQFTRAAAGSAAP*LWLYCS
Trigger: CGAGCAGTACAGCCACAGCCAGGGCGCCGCGGAGCC...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCAGTACTGCTGGCCCATaGGCTCCGCGGCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRTGNQHVTIHQSCRQPISTAGP*APRRPG
Trigger: GCCAGGGCGCCGCGGAGCCCATGGGCCAGCAGTACT...GATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCAGTACTGCTGGCCCATaGGCTCCGCGGCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRSTAGP*APRRPG
Trigger: GCCAGGGCGCCGCGGAGCCCATGGGCCAGCAGTACT...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCTGCGCGGCACCCTGCTaGTACCCGGCCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSCAAPC*YPACCW
Trigger: CCAGCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCA...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CCACCCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCGCGAGAGACAGGCAATaGGCAAGCTCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PPHRGTGRGCPPGAACVSARDRQ*ASSGSG
Trigger: GCCACTTCCAGAGCTTGCCCATTGCCTGTCTCTCGC...GGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp ACGTCTGTTGACGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTCCGTAGCCGGGGTACTGTaGCGGGGCTCCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TSVDGNRWTVVSSRSVLSVAGVL*RGSLGR
Trigger: TCTGCCCAGGGAGCCCCGTCACAGTACCCCGGCTAC...GGACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGCTTGCTTGGAGATCTaGGCAAGTAGGTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AASPSGPWMNTLPQGLQPACLEI*ASRSQH
Trigger: ATGCTGGGACCTACTTGCTCAGATCTCCAAGCAAGC...TGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCTCTGGTACTCCAGGATaGACTGGATCAGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: CRQPIRPLDEHATTRAPASGTPG*TGSGGG
Trigger: ACCACCACCTGATCCAGTGCATCCTGGAGTACCAGA...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCGTTCTGGTTGGAGTCTaGGATCGTGGCCAGGTATAC +
Preference number: 4 (lower is better)
Translates to: CRQPIRPLDEHATTRAPAVLVGV*DRGQVY
Trigger: GTATACCTGGCCACGATCGCAGACTCCAACCAGAAC...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATCGTGGCTCGGCCCGTTaGCAATCTGGCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDRGSAR*QSGPAG
Trigger: TCCTGCAGGGCCAGATTGGCAACGGGCCGAGCCACG...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCTGGTAGTGCTGGCTaGCGCCCTGCGCCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRPGSAG*RPAPSC
Trigger: ACAGCTCGGCGCAGGGCGGCAGCCAGCACTACCAGG...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCTGGTAGTGCTGGCTaGCGCCCTGCGCCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALGEQVTNMSQFTRAAASPGSAG*RPAPSC
Trigger: ACAGCTCGGCGCAGGGCGGCAGCCAGCACTACCAGG...GCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGCTGCCCCATCATGCTaGTCCCCTGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSAAPSC*SPGCPA
Trigger: GGCAGGGCAGCCAGGGGAGCAGCATGATGGGGCAGC...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp AGTAGGTCCCAGCATGAAATGAGCACGCTTCACATGCAGACGTGGCACTGGGCGGCCGCTGCCCCATCATaGTGCTCCCCTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SRSQHEMSTLHMQTWHWAAAAPS*CSPGCP
Trigger: AGGGCAGCCAGGGGAGCAGCATGATGGGGCAGCGGC...CGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCGCCGCTGCCCCATCATaGTGCTCCCCTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EQVTNMSQFTRAAASPSGAAAPS*CSPGCP
Trigger: AGGGCAGCCAGGGGAGCAGCATGATGGGGCAGCGGC...GCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp TCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCCACAATTCACCAGAGCTaGCGCCAGCCCATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SGPWMNTLPQGLQPECVSTIHQS*RQPIRP
Trigger: GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGT...GGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGCTGCATGGACACGTaGCTCGGCCCGTTGCCAATC +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMCCMDT*LGPLPI
Trigger: GATTGGCAACGGGCCGAGCCACGTGTCCATGCAGCA...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAGGCTCCGCGGCGCCCTaGCTGTGGCTGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTGSAAP*LWLYCS
Trigger: CGAGCAGTACAGCCACAGCCAGGGCGCCGCGGAGCC...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCTGCGCGGCACCCTGCTaGTACCCGGCCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DVALGEQVTNMSQFTRAACAAPC*YPACCW
Trigger: CCAGCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCA...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGCTGGGGTACTGCTGCTaGGAGTACGTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMLGYCC*EYVCCC
Trigger: GCAGCAGCAGACGTACTCCCAGCAGCAGTACCCCAG...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR TCA 90 bp AGTAGGTCCCAGCATGAAATGAGCACGCTTCACATGCAGACGTGGCACTGGGCGTCACTCAGGCTGCCCTaGGAGTGCAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRSQHEMSTLHMQTWHWASLRLP*ECRPWL
Trigger: CAGCCAGGGCCTGCACTCTCAGGGCAGCCTGAGTGA...CGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370848.8
CDS-3UTR GCA 90 bp GTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGGTGGCCGCCTGCTGCTaGATCATGGAGACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VTNMSQFTRAAASPSGPWVAACC*IMETGL
Trigger: CAACCCAGTCTCCATGATGCAGCAGCAGGCGGCCAC...CCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGGTACCCGGCCTGCTaGTGGCTGTACTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMWYPAC*WLYWEF
Trigger: AAACTCCCAGTACAGCCAGCAGCAGGCCGGGTACCA...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAGTACGTCTGCTGCTaGGCGGCACCCTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDEYVCC*AAPCWY
Trigger: GTACCAGCAGGGTGCCGCGCAGCAGCAGACGTACTC...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCTGCTGGGAGTACGTCTaGTGCTGCGCGGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: ALGEQVTNMSQFTRAAASCWEYV*CCAAPC
Trigger: GCAGGGTGCCGCGCAGCAGCAGACGTACTCCCAGCA...GCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGTGCTGGGAGTACGTCTaGTGCTGCGCGGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRCWEYV*CCAAPC
Trigger: GCAGGGTGCCGCGCAGCAGCAGACGTACTCCCAGCA...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCTCCCCTTTGCCTCTTaGCCGGGCAGACGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: EQVTNMSQFTRAAASPSGLPFAS*PGRREG
Trigger: GCCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAG...GCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGTGCAGGCCCTGGCTaGAGCCGCTCTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VALGEQVTNMSQFTRAAASAGPG*SRSESG
Trigger: CCCTGACTCAGAGCGGCTCCAGCCAGGGCCTGCACT...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCGGCCCGTTGCCAATCTaGCCCTGCAGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRGPLPI*PCRREE
Trigger: CTCCTCCCTCCTGCAGGGCCAGATTGGCAACGGGCC...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp TCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCCGCCCCATCATGGCGATaGACGACTGGCCCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SGPWMNTLPQGLQPECVSAPSWR*TTGPGS
Trigger: ACTACCAGGGCCAGTCGTCCATCGCCATGATGGGGC...GGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGTACCCGGCCTGCTGCTaGCTGTACTGGGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VTNMSQFTRAAASPSGPWYPACC*LYWEFP
Trigger: GGGAAACTCCCAGTACAGCCAGCAGCAGGCCGGGTA...CCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGAGCCCATCCGGCCCCTaGATGAACACGCTACCACAA +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMSPSGP*MNTLPQ
Trigger: TTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCT...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR TCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGTGGCTGGAGCCGCTCTaGGTCAGGGCTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQWLEPL*VRAPGP
Trigger: GGGCCCTGGAGCCCTGACTCAGAGCGGCTCCAGCCA...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR TCA 90 bp GCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGCTCTGATGACAAAATaGCCCCCAAAGCTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: AASPSGPWMNTLPQGLQPALMTK*PPKLAR
Trigger: TCTAGCTAGCTTTGGGGGTCATTTTGTCATCAGAGC...TGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGCTCCCCATTTGTGCGTaGCATCCGTCTCCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMLPICA*HPSPRR
Trigger: TCTCCTAGGAGACGGATGTCACGCACAAATGGGGAG...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp GCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAATCTTCTGGATGGTTTaGTGCGTAACCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: AASPSGPWMNTLPQGLQPIFWMV*CVTSPL
Trigger: CAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGAT...TGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp CCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCAGCTTATACCAGGTTCCGGTaGAGGATCTGCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PIEAQEEAALQGLHVCPAYTRFR*RICWYC
Trigger: GCAGTACCAGCAGATCCTGCACCGGAACCTGGTATA...AGCTGGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCCCCAGGTTCATGTTCTaGGTGGGCGGGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VALGEQVTNMSQFTRAAAPRFMF*VGGAGS
Trigger: GCTTCCTGCCCCGCCCACGCAGAACATGAACCTGGG...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp GGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCTGGCGTCACTCAGGCTaGCCTGAGAGTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRTGNQHVTIHQSCRQPIWRHSG*PESAGP
Trigger: AGGGCCTGCACTCTCAGGGCAGCCTGAGTGACGCCA...GATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGTTAGGCGCCGTCTGCTaGATGGACACGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRLGAVC*MDTWLG
Trigger: GCCGAGCCACGTGTCCATGCAGCAGACGGCGCCTAA...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCAGCCGGGCCCAGAGATaGTCATGGAGGTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSSRAQR*SWRWWA
Trigger: TGCCCACCACCTCCATGAGCATCTCTGGGCCCGGCT...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGGACGTGGCCGCCTGCTaGTGCATCATGGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRDVAAC*CIMETG
Trigger: CCCAGTCTCCATGATGCAGCAGCAGGCGGCCACGTC...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCGACGTGGCCGCCTGCTaGTGCATCATGGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: VALGEQVTNMSQFTRAAADVAAC*CIMETG
Trigger: CCCAGTCTCCATGATGCAGCAGCAGGCGGCCACGTC...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCTGCTGGTACCCGGCCTaGTGCTGGCTGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSCWYPA*CWLYWE
Trigger: CTCCCAGTACAGCCAGCAGCAGGCCGGGTACCAGCA...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCTGGGAGTACGTCTGCTaGTGCGCGGCACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DVALGEQVTNMSQFTRAAWEYVC*CAAPCW
Trigger: CCAGCAGGGTGCCGCGCAGCAGCAGACGTACTCCCA...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATTGGCTGGGGTACTGCTaGTGGGAGTACGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDWLGYC*WEYVCC
Trigger: GCAGCAGACGTACTCCCAGCAGCAGTACCCCAGCCA...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATTGCTGGCTGGGGTACTaGTGCTGGGAGTACGTCTGC +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDCWLGY*CWEYVC
Trigger: GCAGACGTACTCCCAGCAGCAGTACCCCAGCCAGCA...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCCGGCGCTGTCTGCGGTaGTCGGTAGCTTCCGTACTG +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSRRCLR*SVASVL
Trigger: CAGTACGGAAGCTACCGAGCACCGCAGACAGCGCCG...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp AGGTCCCAGCATGAAATGAGCACGCTTCACATGCAGACGTGGCACTGGGCGAACCGGCGCTGTCTGCGGTaGTCGGTAGCTTCCGTACTG +
Preference number: 4 (lower is better)
Translates to: RSQHEMSTLHMQTWHWANRRCLR*SVASVL
Trigger: CAGTACGGAAGCTACCGAGCACCGCAGACAGCGCCG...GTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCACAATTCACCAGAGCTaGCGCCAGCCCATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ALGEQVTNMSQFTRAAASTIHQS*RQPIRP
Trigger: GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGT...GCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp ACGTCTGTTGACGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTCCCTCACGCCAGTGGTGTaGGCTCGGCGTCATACCCAG +
Preference number: 4 (lower is better)
Translates to: TSVDGNRWTVVSSRSVLSLTPVV*ARRHTQ
Trigger: CTGGGTATGACGCCGAGCGCACACCACTGGCGTGAG...GGACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCGGCACAGGAAGAGGCTaGCCTCCAGGGGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRGTGRG*PPGAAC
Trigger: ACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCC...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCCCAGGTTCATGTTCTaGGTGGGCGGCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPPRFMF*VGGCRQ
Trigger: TTGCCTGCAGCCGCCCACGCAGAACATGAACCTGGG...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000370848.8
CDS-3UTR CCA 90 bp ACGTCTGTTGACGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTCCGCGGGGCTCAGCCCGTaGTCATCGAGGTGGATACTC +
Preference number: 4 (lower is better)
Translates to: TSVDGNRWTVVSSRSVLSAGLSP*SSRWIL
Trigger: GAGTATCCACCTCGATGACCACGGGCTGAGCCCCGC...GGACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCAGCTAGGGACTGCATGTTCTaGTTGGAGTCTGCGATCGTG +
Preference number: 4 (lower is better)
Translates to: PIEAQEEAALQGLHVCPARDCMF*LESAIV
Trigger: CACGATCGCAGACTCCAACCAGAACATGCAGTCCCT...AGCTGGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCGCCCAGAGATGCTCATaGAGGTGGTGGGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPAQRCS*RWWAAC
Trigger: ACACGCTGCCCACCACCTCCATGAGCATCTCTGGGC...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCTGCCCTGCCCCATCATaGCGATGGACGACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSCPAPS*RWTTGP
Trigger: AGGGCCAGTCGTCCATCGCCATGATGGGGCAGGGCA...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATTGGCCCAGGTACTGCTaGGAAGAGCCTTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDWPRYC*EEPCWE
Trigger: CTCCCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCA...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp TCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCCAGCCCATCCGGCCCCTaGATGAACACGCTACCACAA +
Preference number: 4 (lower is better)
Translates to: SGPWMNTLPQGLQPECVSSPSGP*MNTLPQ
Trigger: TTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCT...GGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGAGCCCATCCGGCCCCTaGATGAACACGCTACCACAA +
Preference number: 4 (lower is better)
Translates to: PSGPWMNTLPQGLQPECVSPSGP*MNTLPQ
Trigger: TTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCT...CACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR TCA 90 bp GTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGCTGCTCCGTGTAGGATaGCTGCTGGTAGGCGTAATC +
Preference number: 4 (lower is better)
Translates to: VTNMSQFTRAAASPSGPWLLRVG*LLVGVI
Trigger: GATTACGCCTACCAGCAGTCATCCTACACGGAGCAG...CCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR TCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGGGTCCCAGCATGAAATaGGCACGCTTCACATGCAGA +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMGPSMK*ARFTCR
Trigger: TCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACC...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCGTGTTAGGCGCCGTCTaGTGCATGGACACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VALGEQVTNMSQFTRAAAVLGAV*CMDTWL
Trigger: GAGCCACGTGTCCATGCAGCAGACGGCGCCTAACAC...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp AGGTCCCAGCATGAAATGAGCACGCTTCACATGCAGACGTGGCACTGGGCGAACGTGGCCGCCTGCTGCTaGATCATGGAGACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSQHEMSTLHMQTWHWANVAACC*IMETGL
Trigger: CAACCCAGTCTCCATGATGCAGCAGCAGGCGGCCAC...GTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370848.8
CDS-3UTR GCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGTCCTGGCCCAGGTACTaGTGGGAAGAGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRSWPRY*WEEPCW
Trigger: CCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCAGGA...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCTGGTACCCGGCCTGCTaGTGGCTGTACTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPWYPAC*WLYWEF
Trigger: AAACTCCCAGTACAGCCAGCAGCAGGCCGGGTACCA...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCTGGCTGGGGTACTGCTaGTGGGAGTACGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRWLGYC*WEYVCC
Trigger: GCAGCAGACGTACTCCCAGCAGCAGTACCCCAGCCA...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCTGCTGGCTGGGGTACTaGTGCTGGGAGTACGTCTGC +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSCWLGY*CWEYVC
Trigger: GCAGACGTACTCCCAGCAGCAGTACCCCAGCCAGCA...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACACGGCGCTGTCTGCGGTaGTCGGTAGCTTCCGTACTG +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTRRCLR*SVASVL
Trigger: CAGTACGGAAGCTACCGAGCACCGCAGACAGCGCCG...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCCAACGCACAGAAGATaGCCTCCCACCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRPTHRR*PPTHPI
Trigger: GATGGGGTGGGTGGGAGGGCATCTTCTGTGCGTTGG...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp ACGTCTGTTGACGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTCCGCCCAGAGATGCTCATaGAGGTGGTGGGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: TSVDGNRWTVVSSRSVLSAQRCS*RWWAAC
Trigger: ACACGCTGCCCACCACCTCCATGAGCATCTCTGGGC...GGACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCTGCATCATGGAGACTaGGTTGGACTGCATGTTGAT +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRALHHGD*VGLHVD
Trigger: ATCAACATGCAGTCCAACCCAGTCTCCATGATGCAG...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGGCCCCATCATGGCGATaGACGACTGGCCCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRAPSWR*TTGPGS
Trigger: ACTACCAGGGCCAGTCGTCCATCGCCATGATGGGGC...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGCCCCATCATGGCGATaGACGACTGGCCCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSAPSWR*TTGPGS
Trigger: ACTACCAGGGCCAGTCGTCCATCGCCATGATGGGGC...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACATGCCCTGCCCCATCATaGCGATGGACGACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTCPAPS*RWTTGP
Trigger: AGGGCCAGTCGTCCATCGCCATGATGGGGCAGGGCA...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCTACCCGGCCTGCTGCTaGCTGTACTGGGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GRTGNQHVTIHQSCRQPIYPACC*LYWEFP
Trigger: GGGAAACTCCCAGTACAGCCAGCAGCAGGCCGGGTA...GATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCTGGGGTACTGCTGCTaGGAGTACGTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRLGYCC*EYVCCC
Trigger: GCAGCAGCAGACGTACTCCCAGCAGCAGTACCCCAG...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGTAGCTCTGCTGGCTaGGGTACTGCTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSGSSAG*GTAAGS
Trigger: ACTCCCAGCAGCAGTACCCCAGCCAGCAGAGCTACC...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCGGTTCATGTTCTGCGTaGGCGGCTGCAGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRGSCSA*AAAGNR
Trigger: CCTGTTGCCTGCAGCCGCCCACGCAGAACATGAACC...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370848.8
CDS-3UTR GCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGCGTGGCTCGGCCCGTTaGCAATCTGGCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQRGSAR*QSGPAG
Trigger: TCCTGCAGGGCCAGATTGGCAACGGGCCGAGCCACG...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGCTCCCCTGGCTGCCCTaGCCCATCATGGCGATGGAC +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQLPWLP*PIMAMD
Trigger: GTCCATCGCCATGATGGGGCAGGGCAGCCAGGGGAG...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGTGCTGGGAGTACGTCTaGTGCTGCGCGGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQCWEYV*CCAAPC
Trigger: GCAGGGTGCCGCGCAGCAGCAGACGTACTCCCAGCA...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGCACTGGATCAGGTGGTaGTTCTCGTCCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PSGPWMNTLPQGLQPECVHWIRW*FSSSIF
Trigger: GAAGATGCTGGACGAGAACCACCACCTGATCCAGTG...CACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATCATAGTAGTGCTGCGTaGACTCCTCGAAGGACCGGT +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDHSSAA*TPRRTG
Trigger: ACCGGTCCTTCGAGGAGTCCACGCAGCACTACTATG...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCTACCCGGCCTGCTGCTaGCTGTACTGGGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: DVALGEQVTNMSQFTRAAYPACC*LYWEFP
Trigger: GGGAAACTCCCAGTACAGCCAGCAGCAGGCCGGGTA...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAGGTAGCTCTGCTGGCTaGGGTACTGCTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTGSSAG*GTAAGS
Trigger: ACTCCCAGCAGCAGTACCCCAGCCAGCAGAGCTACC...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGGTAGCTCTGCTGGCTaGGGTACTGCTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: DVALGEQVTNMSQFTRAAGSSAG*GTAAGS
Trigger: ACTCCCAGCAGCAGTACCCCAGCCAGCAGAGCTACC...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCGCAATGGGCAAGCTCTaGAAGTGGCCATCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VALGEQVTNMSQFTRAAAAMGKL*KWPSVA
Trigger: GGCCACAGATGGCCACTTCCAGAGCTTGCCCATTGC...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCTTTGCTTCTTCACTaGCCTTCCATAGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: QSCRQPIRPLDEHATTRAPLLLH*PSIEVV
Trigger: GACTACTTCTATGGAAGGCCAGTGAAGAAGCAAAGG...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCGGTCCCAGCATGAAATaGGCACGCTTCACATGCAGA +
Preference number: 4 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPGPSMK*ARFTCR
Trigger: TCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACC...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp GCAAGCTCTGGAAGTGGCCATCTGTGGCCTCTCCCGTGGGAGATGTTTATCCTTTGCACTCGGCCGTCTTaGCCTTGCTCTGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: ASSGSGHLWPLPWEMFILCTRPS*PCSGTP
Trigger: TGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCA...AAGGATAAACATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCCGGGCCCAGAGATaGTCATGGAGGTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQSRAQR*SWRWWA
Trigger: TGCCCACCACCTCCATGAGCATCTCTGGGCCCGGCT...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR GCA 90 bp ACGTCTGTTGACGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTCCGCAATGGTGCGATCTTaGCCCACCACAACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TSVDGNRWTVVSSRSVLSAMVRS*PTTTSV
Trigger: GACAGAGGTTGTGGTGGGGCAAGATCGCACCATTGC...GGACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCGTCTTGCCCTTGCTCTaGTACTCCAGGATGCACTGG +
Preference number: 4 (lower is better)
Translates to: GRTGNQHVTIHQSCRQPIVLPLL*YSRMHW
Trigger: CCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGAC...GATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATACTGCATGTTCTGGTTaGAGTCTGCGATCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDTACSG*SLRSWP
Trigger: TGGCCACGATCGCAGACTCCAACCAGAACATGCAGT...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCCTGCTGCTGCATCATaGAGACTGGGTTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRPAAAS*RLGWTA
Trigger: TGCAGTCCAACCCAGTCTCCATGATGCAGCAGCAGG...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGTGCCCTGCCCCATCATaGCGATGGACGACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQCPAPS*RWTTGP
Trigger: AGGGCCAGTCGTCCATCGCCATGATGGGGCAGGGCA...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCATAGTAGTGCTGCGTaGACTCCTCGAAGGACCGGT +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRHSSAA*TPRRTG
Trigger: ACCGGTCCTTCGAGGAGTCCACGCAGCACTACTATG...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGGTTGACGGGAACAGGTaGACTGTGGTGTCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRVDGNR*TVVSSR
Trigger: TCTCGAGGACACCACAGTCCACCTGTTCCCGTCAAC...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGAGGTTCCCGAGTAGCTaGGATTACAGGTATGCACCA +
Preference number: 4 (lower is better)
Translates to: VTNMSQFTRAAASPSGPWRFPSS*DYRYAP
Trigger: TGGTGCATACCTGTAATCCCAGCTACTCGGGAACCT...CCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCAGCCAGAGTAATCTCTaGGGGCCCACTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: DVALGEQVTNMSQFTRAASQSNL*GPTSQR
Trigger: TCTCTGGGAAGTGGGCCCTCAGAGATTACTCTGGCT...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp ACGTCTGTTGACGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTCCGCTTGCTTGGAGATCTaGGCAAGTAGGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TSVDGNRWTVVSSRSVLSACLEI*ASRSWK
Trigger: CTTCCAGGACCTACTTGCTCAGATCTCCAAGCAAGC...GGACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGTGCTGGCTGGGGTACTaGTGCTGGGAGTACGTCTGC +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQCWLGY*CWEYVC
Trigger: GCAGACGTACTCCCAGCAGCAGTACCCCAGCCAGCA...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR GCA 90 bp CGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGTTCAAGCCATTCTCCTaGCTCAGGTTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RTGNQHVTIHQSCRQPIRFKPFS*LRFPSS
Trigger: GCTACTCGGGAACCTGAGGCAGGAGAATGGCTTGAA...CCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACATGGAGTCTGCGATCGTaGCCAGGTATACCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTWSLRS*PGIPGS
Trigger: GGAACCTGGTATACCTGGCCACGATCGCAGACTCCA...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGCTGCATCATGGAGACTaGGTTGGACTGCATGTTGAT +
Preference number: 4 (lower is better)
Translates to: PSGPWMNTLPQGLQPECVLHHGD*VGLHVD
Trigger: ATCAACATGCAGTCCAACCCAGTCTCCATGATGCAG...CACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGTGGCCCAGGTACTGCTaGGAAGAGCCTTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQWPRYC*EEPCWE
Trigger: CTCCCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCA...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCGATCTGTCCTGTCCCTaGGCACAGAATGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: GRTGNQHVTIHQSCRQPIDLSCP*AQNALM
Trigger: CATCAGAGCATTCTGTGCCCAGGGACAGGACAGATC...GATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCCAATACCGCTGGCCCTaGGTTAGGCAATTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSQYRWP*VRQFVH
Trigger: GTGGACAAATTGCCTAACCCAGGGCCAGCGGTATTG...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GCAAGCTCTGGAAGTGGCCATCTGTGGCCTCTCCCGTGGGAGATGTTTATCCTTAGACCTAACGTCTGTTaGCGGGAACAGGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: ASSGSGHLWPLPWEMFILRPNVC*REQVDC
Trigger: ACAGTCCACCTGTTCCCGTCAACAGACGTTAGGTCT...AAGGATAAACATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GCAAGTAGGTCCCAGCATGAAATGAGCACGCTTCACATGCAGACGTGGCACTGGGCTTGCTTGGAGATCTaGGCAAGTAGGTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ASRSQHEMSTLHMQTWHWACLEI*ASRSQH
Trigger: ATGCTGGGACCTACTTGCTCAGATCTCCAAGCAAGC...CCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACCTACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATGCACTGGATCAGGTaGTGGTTCTCGTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTMHWIR*WFSSSI
Trigger: GATGCTGGACGAGAACCACCACCTGATCCAGTGCAT...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CCACCCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCAAACATGTACCTTTTTaGATAAACGGAATTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PPHRGTGRGCPPGAACVSKHVPF*INGIGE
Trigger: CTCGCCAATTCCGTTTATCCAAAAAGGTACATGTTT...GGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAAGCACTTCTGAAAACTaGCCATCATTTTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: AASPSGPWMNTLPQGLQPSTSEN*PSFFKF
Trigger: GAATTTGAAAAATGATGGCCAGTTTTCAGAAGTGCT...TGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAGCGTCATACCCAGCATaGAATGAGCACGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTASYPA*NEHASH
Trigger: ATGTGAAGCGTGCTCATTTCATGCTGGGTATGACGC...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACATTCTGGATGGTTTGCTaGGTAACCTCCCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTFWMVC*VTSPLP
Trigger: AGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAA...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GCAAGCTCTGGAAGTGGCCATCTGTGGCCTCTCCCGTGGGAGATGTTTATCCTTTCGTCCAGCATCTTCTaGATGGTTTGCTGCGTAACC +
Preference number: 4 (lower is better)
Translates to: ASSGSGHLWPLPWEMFILSSSIF*MVCCVT
Trigger: GGTTACGCAGCAAACCATCCAGAAGATGCTGGACGA...AAGGATAAACATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGTCTTCATCTCTAAAATaGGAACTGTTACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VTNMSQFTRAAASPSGPWSSSLK*ELLPAS
Trigger: GGAGGCAGGTAACAGTTCCCATTTTAGAGATGAAGA...CCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp AACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGTCCTAGAACAGGACTaGTATTCAACACAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: NQHVTIHQSCRQPIRPLDVLEQD*YSTQAS
Trigger: ACTTGCCTGTGTTGAATACCAGTCCTGTTCTAGGAC...ATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp TCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTATCACACCACCCATCCGGCCCCTGGATaGACACGCTACCACAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPCTDIQYYTQHQKYHTTHPAPG*TRYHKG
Trigger: GCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATG...GGTGGTGTGATACTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTTGGCATGAGTTCTaGTGTACTGTTTTAATATGC +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMCWHEF*CTVLIC
Trigger: GCATATTAAAACAGTACATCAGAACTCATGCCAACA...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGAAGTCCTTTAATCTGTaGCTCAGTTCTTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: QPIRPLDEHATTRAPARMKSFNL*LSSSSL
Trigger: TAGAGATGAAGAACTGAGGCACAGATTAAAGGACTT...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCATGTGTGTCCAGCTGTaGCGTAGCCAGTTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRMCVQL*RSQLKK
Trigger: TTTCTTTAACTGGCTACGCCACAGCTGGACACACAT...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GCAAGCTCTGGAAGTGGCCATCTGTGGCCTCTCCCGTGGGAGATGTTTATCCTTTTGGATAAACGGAATTaGCGAGAGACAGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: ASSGSGHLWPLPWEMFILLDKRN*RETGNG
Trigger: CCCATTGCCTGTCTCTCGCCAATTCCGTTTATCCAA...AAGGATAAACATCTCCCACGGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCTTACGTAACAGAAACTaGCCCAACGCACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: DVALGEQVTNMSQFTRAALRNRN*PNAQKM
Trigger: CATCTTCTGTGCGTTGGGTCAGTTTCTGTTACGTAA...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp ACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAAATTCACAATTTGCTaGATGTCAGGGAACAATAGG +
Preference number: 4 (lower is better)
Translates to: TNMSQFTRAAASPSGPWMKFTIC*MSGNNR
Trigger: CCTATTGTTCCCTGACATCCAGCAAATTGTGAATTT...CATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGATACCCAGCATGAAATaGGCACGCTTCACATGCAGA +
Preference number: 4 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQIPSMK*ARFTCR
Trigger: TCTGCATGTGAAGCGTGCTCATTTCATGCTGGGTAT...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCGAACTCTCATTTCGGTaGTCGAATATGAACACATAC +
Preference number: 4 (lower is better)
Translates to: ALGEQVTNMSQFTRAAASELSFR*SNMNTY
Trigger: GTATGTGTTCATATTCGATCACCGAAATGAGAGTTC...GCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp AAAAAGGATACCTCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTTAGGCGCCGTCTGCTaGATGGACACGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: KKDTSPCTDIQYYTQHQKLGAVC*MDTWLG
Trigger: GCCGAGCCACGTGTCCATGCAGCAGACGGCGCCTAA...CTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGAGGTATCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp GCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCATGAAAAGGAACTGCTaGCATCACTTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: ALGEQVTNMSQFTRAAASMKRNC*HHFPHN
Trigger: ATTATGGGGAAAGTGATGCCAGCAGTTCCTTTTCAT...GCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GCACGCTTCACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACACAGTTAAAGAAAAGTTaGCAACCCACACTACAACAC +
Preference number: 4 (lower is better)
Translates to: ARFTCRRGTGRTGNQHVTQLKKS*QPTLQH
Trigger: GTGTTGTAGTGTGGGTTGTCAACTTTTCTTTAACTG...TGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGTGAAGCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCACATACGTTTATTTTTaGGCCCTTACCAGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: GRTGNQHVTIHQSCRQPITYVYF*ALTSVK
Trigger: CTTAACACTGGTAAGGGCTCAAAAATAAACGTATGT...GATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp GCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCATTTGTCAGCACTTCTaGAAACTGGCCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: ALGEQVTNMSQFTRAAASICQHF*KLAIIF
Trigger: AAAAATGATGGCCAGTTTTCAGAAGTGCTGACAAAT...GCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp AAAAAGGATACCTCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTCCTGGCCCAGGTACTaGTGGGAAGAGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KKDTSPCTDIQYYTQHQKSWPRY*WEEPCW
Trigger: CCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCAGGA...CTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGAGGTATCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCTTCAAATTCACAATTTaGTGGATGTCAGGGAACAAT +
Preference number: 4 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPFKFTI*WMSGNN
Trigger: ATTGTTCCCTGACATCCAGCAAATTGTGAATTTGAA...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp AAAAAGGATACCTCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGGGCAAGCTCTGGAAGTaGCCATCTGTGGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KKDTSPCTDIQYYTQHQKGKLWK*PSVASP
Trigger: GGGAGAGGCCACAGATGGCCACTTCCAGAGCTTGCC...CTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGAGGTATCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCACAAACAATTCATGTTaGCCTAAGCTTTGCTCAACA +
Preference number: 4 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRTNNSC*PKLCST
Trigger: TGTTGAGCAAAGCTTAGGCCAACATGAATTGTTTGT...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR CAA 72 bp TCCTTCAGCAATACCGCTGGCCCTGGGTTAGGCAATTaGTCCACGGCCCTTAGGGATTCATATTTATTTGGA +
Preference number: 4 (lower is better)
Translates to: SFSNTAGPGLGN*STALRDSYLFG
Trigger: TCCAAATAAATATGAATCCCTAAGGGCCGTGGACAAATTGCCTAACCCAGGGCCAGCGGTATTGCTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp AAAAAGGATACCTCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTTCCGGTGCAGGATCTaGTGGTACTGCGTGCACTCG +
Preference number: 4 (lower is better)
Translates to: KKDTSPCTDIQYYTQHQKFRCRI*WYCVHS
Trigger: CGAGTGCACGCAGTACCAGCAGATCCTGCACCGGAA...CTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGAGGTATCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp AAAAAGGATACCTCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTGGTACCCGGCCTGCTaGTGGCTGTACTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KKDTSPCTDIQYYTQHQKWYPAC*WLYWEF
Trigger: AAACTCCCAGTACAGCCAGCAGCAGGCCGGGTACCA...CTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGAGGTATCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp TCACAAACAATTCATGTTGGCCTAAGCTTTGCTCAACATTCATATGACAGAAGAGGTTCATGTTCTGCGTaGGCGGGGCAGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SQTIHVGLSFAQHSYDRRGSCSA*AGQEAG
Trigger: CCCTGCTTCCTGCCCCGCCCACGCAGAACATGAACC...TCTTCTGTCATATGAATGTTGAGCAAAGCTTAGGCCAACATGAATTGTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp TCACAAACAATTCATGTTGGCCTAAGCTTTGCTCAACATTCATATGACAGAAGACGGCCGTCTTGCCCTTaGTCTGGTACTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SQTIHVGLSFAQHSYDRRRPSCP*SGTPGC
Trigger: GCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCG...TCTTCTGTCATATGAATGTTGAGCAAAGCTTAGGCCAACATGAATTGTTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp TCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTATCACACCACCCTGTGGCCTCTCCCGTaGGAGATGTTTATCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SPCTDIQYYTQHQKYHTTLWPLP*EMFILF
Trigger: GAAAAGGATAAACATCTCCCACGGGAGAGGCCACAG...GGTGGTGTGATACTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp TCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTATCACACCACCCTTCAGCAATACCGCTaGCCCTGGGTTAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: SPCTDIQYYTQHQKYHTTLQQYR*PWVRQF
Trigger: AAATTGCCTAACCCAGGGCCAGCGGTATTGCTGAAG...GGTGGTGTGATACTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp TCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTATCACACCACCTCCCTGGGCACAGAATaGTCTGATGACAAAATGACC +
Preference number: 4 (lower is better)
Translates to: SPCTDIQYYTQHQKYHTTSLGTE*SDDKMT
Trigger: GGTCATTTTGTCATCAGAGCATTCTGTGCCCAGGGA...GGTGGTGTGATACTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp TCACAAACAATTCATGTTGGCCTAAGCTTTGCTCAACATTCATATGACAGAAGACATAGTAGTGCTGCGTaGACTCCTCGAAGGACCGGT +
Preference number: 4 (lower is better)
Translates to: SQTIHVGLSFAQHSYDRRHSSAA*TPRRTG
Trigger: ACCGGTCCTTCGAGGAGTCCACGCAGCACTACTATG...TCTTCTGTCATATGAATGTTGAGCAAAGCTTAGGCCAACATGAATTGTTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp TCACAAACAATTCATGTTGGCCTAAGCTTTGCTCAACATTCATATGACAGAAGAGGAACAGGTGGACTGTaGTGTCCTCGAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: SQTIHVGLSFAQHSYDRRGTGGL*CPRDLS
Trigger: GGACAGATCTCGAGGACACCACAGTCCACCTGTTCC...TCTTCTGTCATATGAATGTTGAGCAAAGCTTAGGCCAACATGAATTGTTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CCA 90 bp AAAAAGGATACCTCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGACAACCTCTGTCTCCTaGGTTCAAGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KKDTSPCTDIQYYTQHQKTTSVS*VQAILL
Trigger: CAGGAGAATGGCTTGAACCCAGGAGACAGAGGTTGT...CTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGAGGTATCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR GCA 90 bp TCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGTATCACACCACCATAATGAAAAGGAACTaGTGGCATCACTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SPCTDIQYYTQHQKYHTTIMKRN*WHHFPH
Trigger: ATGGGGAAAGTGATGCCAGCAGTTCCTTTTCATTAT...GGTGGTGTGATACTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp AAAAAGGATACCTCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGATTTTAGTCCCCGATTaGGTTTGCAAATTAGGTCTA +
Preference number: 4 (lower is better)
Translates to: KKDTSPCTDIQYYTQHQKILVPD*VCKLGL
Trigger: TAGACCTAATTTGCAAACTCAATCGGGGACTAAAAT...CTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGAGGTATCCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR TCA 90 bp TCACAAACAATTCATGTTGGCCTAAGCTTTGCTCAACATTCATATGACAGAAGACACGTAGAAAAACCCTaGCAAAATCAGAGGTTCACT +
Preference number: 4 (lower is better)
Translates to: SQTIHVGLSFAQHSYDRRHVEKP*QNQRFT
Trigger: AGTGAACCTCTGATTTTGTCAGGGTTTTTCTACGTG...TCTTCTGTCATATGAATGTTGAGCAAAGCTTAGGCCAACATGAATTGTTTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
3UTR CAA 72 bp TTGATTCAACAACAAACCTTAATGGGTGATGAGCTTTaGCATACCAATATGAATTTGTCAGCACTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LIQQQTLMGDEL*HTNMNLSALLK
Trigger: TTTCAGAAGTGCTGACAAATTCATATTGGTATGCAAAAGCTCATCACCCATTAAGGTTTGTTGTTGAATCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS TCA 90 bp GCTTCCGTACTGCTGGCCTTGGCCTTGCTGGTAGCCGGGGTACTGTaGCGGGGCTCCCTGGGCAGACCCGTAGCCCTGCTGCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: ASVLLALALLVAGVL*RGSLGRPVALLLPG
Trigger: CCCGGGCAGCAGCAGGGCTACGGGTCTGCCCAGGGAGCCCCGTCACAGTACCCCGGCTACCAGCAAGGCCAAGGCCAGCAGTACGGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS GCA 90 bp CCTGCCCCATCATGGCGATGGACGACTGGCCCTGGTAGTGCTGGCTaGCGCCCTGCGCCGAGCTGTAGTGCGACGTGGCCGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PAPSWRWTTGPGSAG*RPAPSCSATWPPAA
Trigger: AGCAGCAGGCGGCCACGTCGCACTACAGCTCGGCGCAGGGCGGCAGCCAGCACTACCAGGGCCAGTCGTCCATCGCCATGATGGGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS CCA 90 bp CCCCTTTGCCTCTTGGCCGGGCAGACGCGAAGGCCACGGACATGGTaGCGGCGCGGGGCTCAGCCCGTGGTCATCGAGGTGGATACTCCG +
Preference number: 5 (lower is better)
Translates to: PLCLLAGQTRRPRTW*RRGAQPVVIEVDTP
Trigger: CGGAGTATCCACCTCGATGACCACGGGCTGAGCCCCGCGCCGCCACCATGTCCGTGGCCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp CCTCCCCTTTGCCTCTTGGCCGGGCAGACGCGAAGGCCACGGACATaGTGGCGGCGCGGGGCTCAGCCCGTGGTCATCGAGGTGGATACT +
Preference number: 5 (lower is better)
Translates to: PPLCLLAGQTRRPRT*WRRGAQPVVIEVDT
Trigger: AGTATCCACCTCGATGACCACGGGCTGAGCCCCGCGCCGCCACCATGTCCGTGGCCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp GCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAACGTGGCTCGGCCCGTaGCCAATCTGGCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AASPSGPWMNTLPQGLQPTWLGP*PIWPCR
Trigger: CCTGCAGGGCCAGATTGGCAACGGGCCGAGCCACGT...TGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CAA 90 bp CCACCCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCCTGCTGGGAAGAGCCTaGCTGGGAGGGCCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: PPHRGTGRGCPPGAACVSLLGRA*LGGPVG
Trigger: CCCTACCGGCCCTCCCAGCAAGGCTCTTCCCAGCAG...GGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp TGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCTCCGTACTGCTGGCCTaGGCCTTGCTGGTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: CRQPIRPLDEHATTRAPASVLLA*ALLVAG
Trigger: CCCGGCTACCAGCAAGGCCAAGGCCAGCAGTACGGA...GGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CAA 90 bp GCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCATCCGTACTGCTGGCCTaGGCCTTGCTGGTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: AASPSGPWMNTLPQGLQPSVLLA*ALLVAG
Trigger: CCCGGCTACCAGCAAGGCCAAGGCCAGCAGTACGGA...TGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CAA 90 bp CCACCCCATCGAGGCACAGGAAGAGGCTGCCCTCCAGGGGCTGCATGTGTGTCCCTGCTGGCCTTGGCCTaGCTGGTAGCCGGGGTACTG +
Preference number: 5 (lower is better)
Translates to: PPHRGTGRGCPPGAACVSLLALA*LVAGVL
Trigger: CAGTACCCCGGCTACCAGCAAGGCCAAGGCCAGCAG...GGACACACATGCAGCCCCTGGAGGGCAGCCTCTTCCTGTGCCTCGATGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp CAGCATCTTCTGGATGGTTTGCTGCGTAACCTCCCCTTTGCCTCTTaGCCGGGCAGACGCGAAGGCCACGGACATGGTGGCGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: QHLLDGLLRNLPFAS*PGRREGHGHGGGAG
Trigger: CCCCGCGCCGCCACCATGTCCGTGGCCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGATGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp CCTGGTAGTGCTGGCTGCCGCCCTGCGCCGAGCTGTAGTGCGACGTaGCCGCCTGCTGCTGCATCATGGAGACTGGGTTGGACTGCATGT +
Preference number: 5 (lower is better)
Translates to: PGSAGCRPAPSCSAT*PPAAASWRLGWTAC
Trigger: ACATGCAGTCCAACCCAGTCTCCATGATGCAGCAGCAGGCGGCCACGTCGCACTACAGCTCGGCGCAGGGCGGCAGCCAGCACTACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000491916.1
CDS-3UTR CAA 90 bp TCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCCCCTCCCCTTTGCCTCTaGGCCGGGCAGACGCGAAGG +
Preference number: 5 (lower is better)
Translates to: SGPWMNTLPQGLQPECVSPPLCL*AGQTRR
Trigger: CCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAGG...GGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp CAAAAACTTCTGGATGGTTTGCTGCGTAACCTCCCCTTTGCCTCTTaGCCGGGCAGACGCGAAGGCCACGGACATGGTGGCGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: QKLLDGLLRNLPFAS*PGRREGHGHGGGAG
Trigger: CCCCGCGCCGCCACCATGTCCGTGGCCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGTTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS-3UTR CAA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGCGTAACCTCCCCTTaGCCTCTTGGCCGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QPIRPLDEHATTRAPARMCVTSP*PLGRAD
Trigger: GTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCA...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 90 bp CGTGGGCGGGGCAGGAAGCAGGGACTGCATGTTCTGGTTGGAGTCTaGGATCGTGGCCAGGTATACCAGGTTCCGGTGCAGGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: RGRGRKQGLHVLVGV*DRGQVYQVPVQDLL
Trigger: CAGCAGATCCTGCACCGGAACCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGCTTCCTGCCCCGCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000450482.5
CDS CCA 90 bp ATGGCGGGCACTCACTGCGTGCACTCGGCCGTCTTGCCCTTGCTCTaGTACTCCAGGATGCACTGGATCAGGTGGTGGTTCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: MAGTHCVHSAVLPLL*YSRMHWIRWWFSSS
Trigger: GCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS-3UTR CAA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCACGTGGCTCGGCCCGTaGCCAATCTGGCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSTWLGP*PIWPCR
Trigger: CCTGCAGGGCCAGATTGGCAACGGGCCGAGCCACGT...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CAA 90 bp GGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCTGCTGGGAAGAGCCTaGCTGGGAGGGCCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: GRTGNQHVTIHQSCRQPILLGRA*LGGPVG
Trigger: CCCTACCGGCCCTCCCAGCAAGGCTCTTCCCAGCAG...GATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CAA 90 bp CAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCTGGGTTAGGCAATTaGTCCACGGCCCTTAGGGAT +
Preference number: 5 (lower is better)
Translates to: QSCRQPIRPLDEHATTRAPGLGN*STALRD
Trigger: ATCCCTAAGGGCCGTGGACAAATTGCCTAACCCAGG...AGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS TCA 90 bp CGTGGACTCCTCGAAGGACCGGTCGTAGCTCTGCTCCGTGTAGGATaGCTGCTGGTAGGCGTAATCGCCATGGCCGTCGGGGTAGTACTG +
Preference number: 5 (lower is better)
Translates to: RGLLEGPVVALLRVG*LLVGVIAMAVGVVL
Trigger: CAGTACTACCCCGACGGCCATGGCGATTACGCCTACCAGCAGTCATCCTACACGGAGCAGAGCTACGACCGGTCCTTCGAGGAGTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS GCA 90 bp GGTGTATGGCGGGCACTCACTGCGTGCACTCGGCCGTCTTGCCCTTaGTCTGGTACTCCAGGATGCACTGGATCAGGTGGTGGTTCTCGT +
Preference number: 5 (lower is better)
Translates to: GVWRALTACTRPSCP*SGTPGCTGSGGGSR
Trigger: ACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 90 bp TGTTCCGGTGTATGGCGGGCACTCACTGCGTGCACTCGGCCGTCTTaGCCTTGCTCTGGTACTCCAGGATGCACTGGATCAGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: CSGVWRALTACTRPS*PCSGTPGCTGSGGG
Trigger: ACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCGGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 90 bp CTGCATGACACCCTCCAAGTGTTCCGGTGTATGGCGGGCACTCACTaGGTGCACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: LHDTLQVFRCMAGTH*VHSAVLPLLWYSRM
Trigger: CATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCGGAACACTTGGAGGGTGTCATGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS-3UTR CAA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCCTGCTGGGAAGAGCCTaGCTGGGAGGGCCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: DVALGEQVTNMSQFTRAALLGRA*LGGPVG
Trigger: CCCTACCGGCCCTCCCAGCAAGGCTCTTCCCAGCAG...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CAA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCCTGCTGGCCTTGGCCTaGCTGGTAGCCGGGGTACTG +
Preference number: 5 (lower is better)
Translates to: VALGEQVTNMSQFTRAAALLALA*LVAGVL
Trigger: CAGTACCCCGGCTACCAGCAAGGCCAAGGCCAGCAG...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS-3UTR CAA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCTCCGTACTGCTGGCCTaGGCCTTGCTGGTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: VALGEQVTNMSQFTRAAASVLLA*ALLVAG
Trigger: CCCGGCTACCAGCAAGGCCAAGGCCAGCAGTACGGA...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS GCA 90 bp GGTGCAGGATCTGCTGGTACTGCGTGCACTCGGCCGTCTTGCCCTTaGTCTGGTACTCCAGGATGCACTGGATCAGGTGGTGGTTCTCGT +
Preference number: 5 (lower is better)
Translates to: GAGSAGTACTRPSCP*SGTPGCTGSGGGSR
Trigger: ACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGATCCTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 90 bp ATGACACCCTCCAAGTGTTCCGGTGTATGGCGGGCACTCACTGCGTaGACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCAGGATGCACT +
Preference number: 5 (lower is better)
Translates to: MTPSKCSGVWRALTA*TRPSCPCSGTPGCT
Trigger: AGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCGGAACACTTGGAGGGTGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 90 bp AGGATCTGCTGGTACTGCGTGCACTCGGCCGTCTTGCCCTTGCTCTaGTACTCCAGGATGCACTGGATCAGGTGGTGGTTCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RICWYCVHSAVLPLL*YSRMHWIRWWFSSS
Trigger: GCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp GGGCAGGAAGCAGGGACTGCATGTTCTGGTTGGAGTCTGCGATCGTaGCCAGGTATACCAGGTTCCGGTGCAGGATCTGCTGGTACTGCG +
Preference number: 5 (lower is better)
Translates to: GQEAGTACSGWSLRS*PGIPGSGAGSAGTA
Trigger: CGCAGTACCAGCAGATCCTGCACCGGAACCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGCTTCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp GGGCAGGAAGCAGGGACTGCATGTTCTGGTTGGAGTCTGCGATCGTaGCCAGGTATACCAGGTTCCGGTGCAGGATCTGCTGGTACCTCC +
Preference number: 5 (lower is better)
Translates to: GQEAGTACSGWSLRS*PGIPGSGAGSAGTS
Trigger: GGAGGTACCAGCAGATCCTGCACCGGAACCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGCTTCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS-3UTR CAA 90 bp GAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCGTGCACTCGGCCGTCTaGCCCTTGCTCTGGTACTCC +
Preference number: 5 (lower is better)
Translates to: EQVTNMSQFTRAAASPSGVHSAV*PLLWYS
Trigger: GGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCAC...GCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp GACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCCTGCTGGCCTTGGCCTaGCTGGTAGCCGGGGTACTG +
Preference number: 5 (lower is better)
Translates to: DVALGEQVTNMSQFTRAALLALA*LVAGVL
Trigger: CAGTACCCCGGCTACCAGCAAGGCCAAGGCCAGCAG...GGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS TCA 90 bp TGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGATaGACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCCCTTA +
Preference number: 5 (lower is better)
Translates to: CHNSPELPPAHPAPG*TRYHKGSSQNVCPL
Trigger: TAAGGGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS GCA 90 bp ACTGCGTGCACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCAGGATaGACTGGATCAGGTGGTGGTTCTCGTCCAGCATCTTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: TACTRPSCPCSGTPG*TGSGGGSRPASSGW
Trigger: CCATCCAGAAGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp GTGCACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCAGGATGCACTaGATCAGGTGGTGGTTCTCGTCCAGCATCATGGAGGTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: VHSAVLPLLWYSRMH*IRWWFSSSIMEVSG
Trigger: TCCGGAAACCTCCATGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 90 bp TCTGTGCTTAGACTCTGCATGACACCCTCCAAGTGTTCCGGTGTATaGCGGGCACTCACTGCGTGCACTCGGCCGTCTTGCCCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SVLRLCMTPSKCSGV*RALTACTRPSCPCS
Trigger: AGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCGGAACACTTGGAGGGTGTCATGCAGAGTCTAAGCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 90 bp CTCGATGACTGGCCGGCATTCTTCAAAAACTTCTGGATGGTTTGCTaGGTAACCTCCCCTTTGCCTCTTGGCCGGGCAGACGCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LDDWPAFFKNFWMVC*VTSPLPLGRADAKA
Trigger: GGCCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGTTTTTGAAGAATGCCGGCCAGTCATCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 90 bp ACTGCGTGCACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCAGGATaGACTGGATCAGGTGGTGGTTCTCGTCCAGCATCATGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: TACTRPSCPCSGTPG*TGSGGGSRPASWRF
Trigger: AAACCTCCATGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 90 bp GTGCACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCAGGATGCACTaGATCAGGTGGTGGTTCTCGTCCAGCATCTTCTGGATGGTTTGC +
Preference number: 5 (lower is better)
Translates to: VHSAVLPLLWYSRMH*IRWWFSSSIFWMVC
Trigger: GCAAACCATCCAGAAGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp CGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCGACTGCATGTTCTGGTaGGAGTCTGCGATCGTGGCC +
Preference number: 5 (lower is better)
Translates to: RGTGRTGNQHVTIHQSCRDCMFW*ESAIVA
Trigger: GGCCACGATCGCAGACTCCAACCAGAACATGCAGTC...GCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 90 bp GCACTCGATGACTGGCCGGCATTCTTCAAAAACTTCTGGATGGTTTaGTGCGTAACCTCCCCTTTGCCTCTTGGCCGGGCAGACGCGAAG +
Preference number: 5 (lower is better)
Translates to: ALDDWPAFFKNFWMV*CVTSPLPLGRADAK
Trigger: CTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGTTTTTGAAGAATGCCGGCCAGTCATCGAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS-3UTR CAA 90 bp TCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGTGTGTCCCATCTTCTGGATGGTTaGCTGCGTAACCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: SGPWMNTLPQGLQPECVSHLLDG*LRNLPF
Trigger: AAAGGGGAGGTTACGCAGCAAACCATCCAGAAGATG...GGACACACATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGTCGGCCGTCTTGCCCTaGCTCTGGTACTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQSAVLP*LWYSRM
Trigger: CATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGA...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp AAACCAAGGGCACTCGATGACTGGCCGGCATTCTTCAAAAACTTCTaGATGGTTTGCTGCGTAACCTCCCCTTTGCCTCTTGGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: KPRALDDWPAFFKNF*MVCCVTSPLPLGRA
Trigger: TGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGTTTTTGAAGAATGCCGGCCAGTCATCGAGTGCCCTTGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS-3UTR CAA 90 bp GGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGAATTTCACTCTTGTaGCCTAGGCTCGGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: GEQVTNMSQFTRAAASPSGISLL*PRLGCN
Trigger: ATTGCACCCGAGCCTAGGCAACAAGAGTGAAATTCC...GGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp AGAAATTCTAGTCCGCCGAAACCGCAACCAGGCGTGAAGGGGGAATaGACGCACTTTCAGACCCGCAAGTTAGGAAAACGCACCTTGTAC +
Preference number: 5 (lower is better)
Translates to: RNSSPPKPQPGVKGE*THFQTRKLGKRTLY
Trigger: GTACAAGGTGCGTTTTCCTAACTTGCGGGTCTGAAAGTGCGTCCATTCCCCCTTCACGCCTGGTTGCGGTTTCGGCGGACTAGAATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS-3UTR CAA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCATCATGGAGACTGGGTaGGACTGCATGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: VALGEQVTNMSQFTRAAAIMETG*DCMLML
Trigger: CAACATCAACATGCAGTCCAACCCAGTCTCCATGAT...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000370848.8
CDS-3UTR CAA 90 bp ACATGCAGACGTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGCACTTCTCTCCCCATTaGTGCGTGACATCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: TCRRGTGRTGNQHVTIHQHFSPH*CVTSVS
Trigger: GGAGACGGATGTCACGCACAAATGGGGAGAGAAGTG...CTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCACGTCTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp CAGCCCATCCGGCCCCTGGATGAACACGCTACCACAAGGGCTCCAGCCAGAATGAGTCCCCGATTGAGTTaGCAAATTAGGTCTATGAAA +
Preference number: 5 (lower is better)
Translates to: QPIRPLDEHATTRAPARMSPRLS*QIRSMK
Trigger: TTTCATAGACCTAATTTGCAAACTCAATCGGGGACT...CATTCTGGCTGGAGCCCTTGTGGTAGCGTGTTCATCCAGGGGCCGGATGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp ACGTCTGTTGACGGGAACAGGTGGACTGTGGTGTCCTCGAGATCTGTCCTGTCCCTTCTTTGTACAGTTTaGAAGGGGTGCCCCCTATTC +
Preference number: 5 (lower is better)
Translates to: TSVDGNRWTVVSSRSVLSLLCTV*KGCPLF
Trigger: GAATAGGGGGCACCCCTTCAAAACTGTACAAAGAAG...GGACAGGACAGATCTCGAGGACACCACAGTCCACCTGTTCCCGTCAACAGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp GCAAGTAGGTCCCAGCATGAAATGAGCACGCTTCACATGCAGACGTGGCACTGGATCATGGAGACTGGGTaGGACTGCATGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: ASRSQHEMSTLHMQTWHWIMETG*DCMLML
Trigger: CAACATCAACATGCAGTCCAACCCAGTCTCCATGAT...CCAGTGCCACGTCTGCATGTGAAGCGTGCTCATTTCATGCTGGGACCTACTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370848.8
CDS-3UTR CAA 90 bp GAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCTTTTCATGTCTTCCTTaGCTTCTTCACTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: EQVTNMSQFTRAAASPSGFSCLP*LLHWPS
Trigger: GGAAGGCCAGTGAAGAAGCAAAGGAAGACATGAAAA...GCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp GTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCCTGGAAAACATGTACCTTTTaGGATAAACGGAATTGGCGA +
Preference number: 5 (lower is better)
Translates to: VTNMSQFTRAAASPSGPWKTCTF*DKRNWR
Trigger: TCGCCAATTCCGTTTATCCAAAAAGGTACATGTTTT...CCAGGGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 90 bp GTTAGGAAAACGCACCTTGTACCCAAACCAAGGGCACTCGATGACTaGCCGGCATTCTTCAAAAACTTCTGGATGGTTTGCTGCGTAACC +
Preference number: 5 (lower is better)
Translates to: VRKTHLVPKPRALDD*PAFFKNFWMVCCVT
Trigger: GGTTACGCAGCAAACCATCCAGAAGTTTTTGAAGAATGCCGGCCAGTCATCGAGTGCCCTTGGTTTGGGTACAAGGTGCGTTTTCCTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS-3UTR CAA 90 bp ACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAGCCCATCCGGCCCATGGGTGATGAGCTTTaGCATACCAATATGAATTTG +
Preference number: 5 (lower is better)
Translates to: TGNQHVTIHQSCRQPIRPMGDEL*HTNMNL
Trigger: CAAATTCATATTGGTATGCAAAAGCTCATCACCCAT...GGGCCGGATGGGCTGGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS-3UTR CAA 90 bp GTGGCACTGGGCGAACAGGTAACCAACATGTCACAATTCACCAGAGCTGCCGCCAATTTTAGTCCCCGATaGAGTTTGCAAATTAGGTCT +
Preference number: 5 (lower is better)
Translates to: VALGEQVTNMSQFTRAAANFSPR*SLQIRS
Trigger: AGACCTAATTTGCAAACTCAATCGGGGACTAAAATT...GGCGGCAGCTCTGGTGAATTGTGACATGTTGGTTACCTGTTCGCCCAGTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS TCA 90 bp AGGTCACCACTTCTGAAGGTGAAGACACCCCAATTTCCCTTCAAGTaGCTTTGGGAAGAGTTGCTATCAACAGCACTATTAATGATTAAG +
Preference number: 5 (lower is better)
Translates to: RSPLLKVKTPQFPFK*LWEELLSTALLMIK
Trigger: CTTAATCATTAATAGTGCTGTTGATAGCAACTCTTCCCAAAGTCACTTGAAGGGAAATTGGGGTGTCTTCACCTTCAGAAGTGGTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491916.1
CDS-3UTR CAA 90 bp AAAAAGGATACCTCTCCGTGTACCGACATACAATACTATACACAGCACCAAAAGCCAGTTAAAGAAAAGTaGACAACCCACACTACAACA +
Preference number: 5 (lower is better)
Translates to: KKDTSPCTDIQYYTQHQKPVKEK*TTHTTT
Trigger: TGTTGTAGTGTGGGTTGTCAACTTTTCTTTAACTGG...CTTTTGGTGCTGTGTATAGTATTGTATGTCGGTACACGGAGAGGTATCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 72 bp TGCCTCTTGGCCGGGCAGACGCGAAGGCCACGGACATaGTGGCGGCGCGGGGCTCAGCCCGTGGTCATCGAG +
Preference number: 6 (lower is better)
Translates to: CLLAGQTRRPRT*WRRGAQPVVIE
Trigger: CTCGATGACCACGGGCTGAGCCCCGCGCCGCCACCATGTCCGTGGCCTTCGCGTCTGCCCGGCCAAGAGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 72 bp TCATGGCGATGGACGACTGGCCCTGGTAGTGCTGGCTaGCGCCCTGCGCCGAGCTGTAGTGCGACGTGGCCG +
Preference number: 6 (lower is better)
Translates to: SWRWTTGPGSAG*RPAPSCSATWP
Trigger: CGGCCACGTCGCACTACAGCTCGGCGCAGGGCGGCAGCCAGCACTACCAGGGCCAGTCGTCCATCGCCATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS GCA 72 bp TGCTGGCTGGGGTACTGCTGCTGGGAGTACGTCTGCTaGTGCGCGGCACCCTGCTGGTACCCGGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CWLGYCCWEYVC*CAAPCWYPACC
Trigger: GCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCAGCAGCAGACGTACTCCCAGCAGCAGTACCCCAGCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS CCA 72 bp GCTGGCTGCCGCCCTGCGCCGAGCTGTAGTGCGACGTaGCCGCCTGCTGCTGCATCATGGAGACTGGGTTGG +
Preference number: 6 (lower is better)
Translates to: AGCRPAPSCSAT*PPAAASWRLGW
Trigger: CCAACCCAGTCTCCATGATGCAGCAGCAGGCGGCCACGTCGCACTACAGCTCGGCGCAGGGCGGCAGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000491916.1
CDS CCA 72 bp TGCTGCTCCCCTGGCTGCCCTGCCCCATCATGGCGATaGACGACTGGCCCTGGTAGTGCTGGCTGCCGCCCT +
Preference number: 6 (lower is better)
Translates to: CCSPGCPAPSWR*TTGPGSAGCRP
Trigger: AGGGCGGCAGCCAGCACTACCAGGGCCAGTCGTCCATCGCCATGATGGGGCAGGGCAGCCAGGGGAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS CCA 72 bp CCATCATGCTGCTCCCCTGGCTGCCCTGCCCCATCATaGCGATGGACGACTGGCCCTGGTAGTGCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: PSCCSPGCPAPS*RWTTGPGSAGC
Trigger: GCAGCCAGCACTACCAGGGCCAGTCGTCCATCGCCATGATGGGGCAGGGCAGCCAGGGGAGCAGCATGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS CCA 72 bp CTGGATGGTTTGCTGCGTAACCTCCCCTTTGCCTCTTaGCCGGGCAGACGCGAAGGCCACGGACATGGTGGC +
Preference number: 6 (lower is better)
Translates to: LDGLLRNLPFAS*PGRREGHGHGG
Trigger: GCCACCATGTCCGTGGCCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000450482.5
CDS CAA 72 bp GCGGGCACTCACTGCGTGCACTCGGCCGTCTTGCCCTaGCTCTGGTACTCCAGGATGCACTGGATCAGGTGG +
Preference number: 6 (lower is better)
Translates to: AGTHCVHSAVLP*LWYSRMHWIRW
Trigger: CCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CAA 90 bp CGGTGTATGGCGGGCACTCACTGCGTGCACTCGGCCGTCTTGCCCTaGCTCTGGTACTCCAGGATGCACTGGATCAGGTGGTGGTTCTCG +
Preference number: 6 (lower is better)
Translates to: RCMAGTHCVHSAVLP*LWYSRMHWIRWWFS
Trigger: CGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CAA 90 bp GTGTTCCGGTGTATGGCGGGCACTCACTGCGTGCACTCGGCCGTCTaGCCCTTGCTCTGGTACTCCAGGATGCACTGGATCAGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: VFRCMAGTHCVHSAV*PLLWYSRMHWIRWW
Trigger: CCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCGGAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS TCA 72 bp CTCGAAGGACCGGTCGTAGCTCTGCTCCGTGTAGGATaGCTGCTGGTAGGCGTAATCGCCATGGCCGTCGGG +
Preference number: 6 (lower is better)
Translates to: LEGPVVALLRVG*LLVGVIAMAVG
Trigger: CCCGACGGCCATGGCGATTACGCCTACCAGCAGTCATCCTACACGGAGCAGAGCTACGACCGGTCCTTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331758.8
ENST00000370848.8
ENST00000492466.2
CDS GCA 72 bp GAGTCTGCGATCGTGGCCAGGTATACCAGGTTCCGGTaGAGGATCTGCTGGTACTGCGTGCACTCGGCCGTC +
Preference number: 6 (lower is better)
Translates to: ESAIVARYTRFR*RICWYCVHSAV
Trigger: GACGGCCGAGTGCACGCAGTACCAGCAGATCCTGCACCGGAACCTGGTATACCTGGCCACGATCGCAGACTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 72 bp CGGGCACTCACTGCGTGCACTCGGCCGTCTTGCCCTTaGTCTGGTACTCCAGGATGCACTGGATCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: RALTACTRPSCP*SGTPGCTGSGG
Trigger: ACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 72 bp ACCCTCCAAGTGTTCCGGTGTATGGCGGGCACTCACTaGGTGCACTCGGCCGTCTTGCCCTTGCTCTGGTAC +
Preference number: 6 (lower is better)
Translates to: TLQVFRCMAGTH*VHSAVLPLLWY
Trigger: GTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCGGAACACTTGGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 72 bp GAGTCTGCGATCGTGGCCAGGTATACCAGGTTCCGGTaGAGGATCTGCTGGTACCTCCGTGCTGGGGGACTC +
Preference number: 6 (lower is better)
Translates to: ESAIVARYTRFR*RICWYLRAGGL
Trigger: GAGTCCCCCAGCACGGAGGTACCAGCAGATCCTGCACCGGAACCTGGTATACCTGGCCACGATCGCAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 72 bp TGCGTGGGCGGGGCAGGAAGCAGGGACTGCATGTTCTaGTTGGAGTCTGCGATCGTGGCCAGGTATACCAGG +
Preference number: 6 (lower is better)
Translates to: CVGGAGSRDCMF*LESAIVARYTR
Trigger: CCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGCTTCCTGCCCCGCCCACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000450482.5
CDS CAA 90 bp CGGTGCAGGATCTGCTGGTACTGCGTGCACTCGGCCGTCTTGCCCTaGCTCTGGTACTCCAGGATGCACTGGATCAGGTGGTGGTTCTCG +
Preference number: 6 (lower is better)
Translates to: RCRICWYCVHSAVLP*LWYSRMHWIRWWFS
Trigger: CGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGATCCTGCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 72 bp GTATGGCGGGCACTCACTGCGTGCACTCGGCCGTCTTaGCCTTGCTCTGGTACTCCAGGATGCACTGGATCA +
Preference number: 6 (lower is better)
Translates to: VWRALTACTRPS*PCSGTPGCTGS
Trigger: TGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 72 bp TCCAAGTGTTCCGGTGTATGGCGGGCACTCACTGCGTaGACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCA +
Preference number: 6 (lower is better)
Translates to: SKCSGVWRALTA*TRPSCPCSGTP
Trigger: TGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCGGAACACTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 72 bp TGGGCGGGGCAGGAAGCAGGGACTGCATGTTCTGGTTaGAGTCTGCGATCGTGGCCAGGTATACCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: WAGQEAGTACSG*SLRSWPGIPGS
Trigger: GGAACCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGCTTCCTGCCCCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000450482.5
CDS CCA 72 bp AGACTCTGCATGACACCCTCCAAGTGTTCCGGTGTATaGCGGGCACTCACTGCGTGCACTCGGCCGTCTTGC +
Preference number: 6 (lower is better)
Translates to: RLCMTPSKCSGV*RALTACTRPSC
Trigger: GCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACACCGGAACACTTGGAGGGTGTCATGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CAA 72 bp GTGGGCGGGGCAGGAAGCAGGGACTGCATGTTCTGGTaGGAGTCTGCGATCGTGGCCAGGTATACCAGGTTC +
Preference number: 6 (lower is better)
Translates to: VGGAGSRDCMFW*ESAIVARYTRF
Trigger: GAACCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGCTTCCTGCCCCGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000450482.5
CDS CAA 72 bp TGTATGGCGGGCACTCACTGCGTGCACTCGGCCGTCTaGCCCTTGCTCTGGTACTCCAGGATGCACTGGATC +
Preference number: 6 (lower is better)
Translates to: CMAGTHCVHSAV*PLLWYSRMHWI
Trigger: GATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGTGCCCGCCATACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 72 bp TCTGCTGGTACTGCGTGCACTCGGCCGTCTTGCCCTTaGTCTGGTACTCCAGGATGCACTGGATCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: SAGTACTRPSCP*SGTPGCTGSGG
Trigger: ACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 72 bp GCAGGATCTGCTGGTACTGCGTGCACTCGGCCGTCTTaGCCTTGCTCTGGTACTCCAGGATGCACTGGATCA +
Preference number: 6 (lower is better)
Translates to: AGSAGTACTRPS*PCSGTPGCTGS
Trigger: TGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGATCCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 72 bp GGCAGGAAGCAGGGACTGCATGTTCTGGTTGGAGTCTaGGATCGTGGCCAGGTATACCAGGTTCCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: GRKQGLHVLVGV*DRGQVYQVPVQ
Trigger: CTGCACCGGAACCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGCTTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000450482.5
CDS CCA 72 bp TGGTACTGCGTGCACTCGGCCGTCTTGCCCTTGCTCTaGTACTCCAGGATGCACTGGATCAGGTGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: WYCVHSAVLPLL*YSRMHWIRWWF
Trigger: GAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 72 bp ACTCACTGCGTGCACTCGGCCGTCTTGCCCTTGCTCTaGTACTCCAGGATGCACTGGATCAGGTGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: THCVHSAVLPLL*YSRMHWIRWWF
Trigger: GAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CAA 72 bp ATCTGCTGGTACTGCGTGCACTCGGCCGTCTTGCCCTaGCTCTGGTACTCCAGGATGCACTGGATCAGGTGG +
Preference number: 6 (lower is better)
Translates to: ICWYCVHSAVLP*LWYSRMHWIRW
Trigger: CCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CAA 72 bp TGCAGGATCTGCTGGTACTGCGTGCACTCGGCCGTCTaGCCCTTGCTCTGGTACTCCAGGATGCACTGGATC +
Preference number: 6 (lower is better)
Translates to: CRICWYCVHSAV*PLLWYSRMHWI
Trigger: GATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGATCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 72 bp TGGTGGTTCTCGTCCAGCATCTTCTGGATGGTTTGCTaGGTAACCTCCCCTTTGCCTCTTGGCCGGGCAGAC +
Preference number: 6 (lower is better)
Translates to: WWFSSSIFWMVC*VTSPLPLGRAD
Trigger: GTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGATGCTGGACGAGAACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 72 bp ACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCAGGATaGACTGGATCAGGTGGTGGTTCTCGTCCAGCATCT +
Preference number: 6 (lower is better)
Translates to: TRPSCPCSGTPG*TGSGGGSRPAS
Trigger: AGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS GCA 72 bp ACTCGGCCGTCTTGCCCTTGCTCTGGTACTCCAGGATaGACTGGATCAGGTGGTGGTTCTCGTCCAGCATCA +
Preference number: 6 (lower is better)
Translates to: TRPSCPCSGTPG*TGSGGGSRPAS
Trigger: TGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 72 bp GCCGTCTTGCCCTTGCTCTGGTACTCCAGGATGCACTaGATCAGGTGGTGGTTCTCGTCCAGCATCTTCTGG +
Preference number: 6 (lower is better)
Translates to: AVLPLLWYSRMH*IRWWFSSSIFW
Trigger: CCAGAAGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 72 bp GCAGGGACTGCATGTTCTGGTTGGAGTCTGCGATCGTaGCCAGGTATACCAGGTTCCGGTGCAGGATCTGCT +
Preference number: 6 (lower is better)
Translates to: AGTACSGWSLRS*PGIPGSGAGSA
Trigger: AGCAGATCCTGCACCGGAACCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331758.8
ENST00000450482.5
CDS CCA 72 bp AGTCCGCCGAAACCGCAACCAGGCGTGAAGGGGGAATaGACGCACTTTCAGACCCGCAAGTTAGGAAAACGC +
Preference number: 6 (lower is better)
Translates to: SPPKPQPGVKGE*THFQTRKLGKR
Trigger: GCGTTTTCCTAACTTGCGGGTCTGAAAGTGCGTCCATTCCCCCTTCACGCCTGGTTGCGGTTTCGGCGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 72 bp GCCGTCTTGCCCTTGCTCTGGTACTCCAGGATGCACTaGATCAGGTGGTGGTTCTCGTCCAGCATCATGGAG +
Preference number: 6 (lower is better)
Translates to: AVLPLLWYSRMH*IRWWFSSSIME
Trigger: CTCCATGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS TCA 72 bp TTGGGACGTATCTGGCCTCTGTGCTTAGACTCTGCATaGCACCCTCCAAGTGTTCCGGTGTATGGCGGGCAC +
Preference number: 6 (lower is better)
Translates to: LGRIWPLCLDSA*HPPSVPVYGGH
Trigger: GTGCCCGCCATACACCGGAACACTTGGAGGGTGTCATGCAGAGTCTAAGCACAGAGGCCAGATACGTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 72 bp CCGGAAGGGCTACGGTCTGATCCTGAGGGAGACTTCTaGGTAGAAATTCTAGTCCGCCGAAACCGCAACCAG +
Preference number: 6 (lower is better)
Translates to: PEGLRSDPEGDF*VEILVRRNRNQ
Trigger: CTGGTTGCGGTTTCGGCGGACTAGAATTTCTACGCAGAAGTCTCCCTCAGGATCAGACCGTAGCCCTTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 72 bp CCCTTGCTCTGGTACTCCAGGATGCACTGGATCAGGTaGTGGTTCTCGTCCAGCATCATGGAGGTTTCCGGA +
Preference number: 6 (lower is better)
Translates to: PLLWYSRMHWIR*WFSSSIMEVSG
Trigger: TCCGGAAACCTCCATGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS TCA 72 bp GTAGAAATTCTAGTCCGCCGAAACCGCAACCAGGCGTaGAGGGGGAATGGACGCACTTTCAGACCCGCAAGT +
Preference number: 6 (lower is better)
Translates to: VEILVRRNRNQA*RGNGRTFRPAS
Trigger: ACTTGCGGGTCTGAAAGTGCGTCCATTCCCCCTTCACGCCTGGTTGCGGTTTCGGCGGACTAGAATTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 72 bp TGGCCGGCATTCTTCAAAAACTTCTGGATGGTTTGCTaGGTAACCTCCCCTTTGCCTCTTGGCCGGGCAGAC +
Preference number: 6 (lower is better)
Translates to: WPAFFKNFWMVC*VTSPLPLGRAD
Trigger: GTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGTTTTTGAAGAATGCCGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS GCA 72 bp GACTGGCCGGCATTCTTCAAAAACTTCTGGATGGTTTaGTGCGTAACCTCCCCTTTGCCTCTTGGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: DWPAFFKNFWMV*CVTSPLPLGRA
Trigger: TGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGTTTTTGAAGAATGCCGGCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 72 bp CCCTTGCTCTGGTACTCCAGGATGCACTGGATCAGGTaGTGGTTCTCGTCCAGCATCTTCTGGATGGTTTGC +
Preference number: 6 (lower is better)
Translates to: PLLWYSRMHWIR*WFSSSIFWMVC
Trigger: GCAAACCATCCAGAAGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 72 bp TTGCTCTGGTACTCCAGGATGCACTGGATCAGGTGGTaGTTCTCGTCCAGCATCATGGAGGTTTCCGGAAGG +
Preference number: 6 (lower is better)
Translates to: LLWYSRMHWIRW*FSSSIMEVSGR
Trigger: CCTTCCGGAAACCTCCATGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CAA 72 bp ACGCACTTTCAGACCCGCAAGTTAGGAAAACGCACCTaGTACCCAAACCAAGGGCACTCGATGACTGGCCGG +
Preference number: 6 (lower is better)
Translates to: THFQTRKLGKRT*YPNQGHSMTGR
Trigger: CCGGCCAGTCATCGAGTGCCCTTGGTTTGGGTACAAGGTGCGTTTTCCTAACTTGCGGGTCTGAAAGTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CAA 90 bp GGGGAATGGACGCACTTTCAGACCCGCAAGTTAGGAAAACGCACCTaGTACCCAAACCAAGGGCACTCGATGACTGGCCGGCATTCTTCA +
Preference number: 6 (lower is better)
Translates to: GEWTHFQTRKLGKRT*YPNQGHSMTGRHSS
Trigger: TGAAGAATGCCGGCCAGTCATCGAGTGCCCTTGGTTTGGGTACAAGGTGCGTTTTCCTAACTTGCGGGTCTGAAAGTGCGTCCATTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS CCA 72 bp TTGCTCTGGTACTCCAGGATGCACTGGATCAGGTGGTaGTTCTCGTCCAGCATCTTCTGGATGGTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: LLWYSRMHWIRW*FSSSIFWMVCC
Trigger: GCAGCAAACCATCCAGAAGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331758.8
CDS CCA 72 bp GCACTCGATGACTGGCCGGCATTCTTCAAAAACTTCTaGATGGTTTGCTGCGTAACCTCCCCTTTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: ALDDWPAFFKNF*MVCCVTSPLPL
Trigger: AAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGTTTTTGAAGAATGCCGGCCAGTCATCGAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450482.5
CDS TCA 72 bp CTTCTGAAGGTGAAGACACCCCAATTTCCCTTCAAGTaGCTTTGGGAAGAGTTGCTATCAACAGCACTATTA +
Preference number: 6 (lower is better)
Translates to: LLKVKTPQFPFK*LWEELLSTALL
Trigger: TAATAGTGCTGTTGATAGCAACTCTTCCCAAAGTCACTTGAAGGGAAATTGGGGTGTCTTCACCTTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491916.1