Pregenerated sensors for SRSF9 (Homo sapiens)
Ensembl gene IDs: ENSG00000111786Ensembl transcript IDs: ENST00000546942.1, ENST00000548326.1, ENST00000548792.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCAGCAGAGGAGTCATGTCCAGGCTGGCTTGTCCCCAGGCCCTCTaGCTTCAGCCACCATTCTCAGAAGATCCAAAGATGCCAAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SSRGVMSRLACPQAL*LQPPFSEDPKMPRG Trigger: TCCCCTTGGCATCTTTGGATCTTCTGAGAATGGTGGCTGAAGGCAGAGGGCCTGGGGACAAGCCAGCCTGGACATGACTCCTCTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS TCA 90 bp | CAAAGATGCCAAGGGGAAAGAAGCCGGATGCTTTTTCACCTTAGGTaGAAGTCAGTAATTGGAGTTACCCTTTCTGAGGCCCTGCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: QRCQGERSRMLFHLR*KSVIGVTLSEALLC Trigger: GCAAAGCAGGGCCTCAGAAAGGGTAACTCCAATTACTGACTTTCACCTAAGGTGAAAAAGCATCCGGCTTCTTTCCCCTTGGCATCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS GCA 90 bp | TATGGTTATGTTCTTCCAAGGCTGCACTCCCAGCGCAATTTCATTTaGAGGATACTTTCCTCATTGGCAATCCAGGGCAAGGCTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: YGYVLPRLHSQRNFI*RILSSLAIQGKASH Trigger: GTGTGAAGCCTTGCCCTGGATTGCCAATGAGGAAAGTATCCTGCAAATGAAATTGCGCTGGGAGTGCAGCCTTGGAAGAACATAACCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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| CDS GCA 90 bp | GCTAAGAACTGGAAAGGATCTCAGGGGTCATATAGTTTAATCCCCTaGCACCTCATGTATGCATCTTTGGATGGGCATCTATGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: AKNWKGSQGSYSLIP*HLMYASLDGHLWKE Trigger: CTCCTTCCATAGATGCCCATCCAAAGATGCATACATGAGGTGGCAGGGGATTAAACTATATGACCCCTGAGATCCTTTCCAGTTCTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS GCA 90 bp | GGCATGGAGAACATAAGAAAGCCCACATCCTTCAGCTATGTTAACTaGCCTGTTAAGAGCCAGCAATACCTATGGTCCTTTCTCCATGAT | + |
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Preference number: 5 (lower is better) Translates to: GMENIRKPTSFSYVN*PVKSQQYLWSFLHD Trigger: ATCATGGAGAAAGGACCATAGGTATTGCTGGCTCTTAACAGGGCAGTTAACATAGCTGAAGGATGTGGGCTTTCTTATGTTCTCCATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548792.1 |
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| CDS CCA 90 bp | TCCTTCAGCTATGTTAACTGCCCTGTTAAGAGCCAGCAATACCTATaGTCCTTTCTCCATGATCACTTAAATCCTGAGGGTCCCCAAATC | + |
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Preference number: 5 (lower is better) Translates to: SFSYVNCPVKSQQYL*SFLHDHLNPEGPQI Trigger: GATTTGGGGACCCTCAGGATTTAAGTGATCATGGAGAAAGGACCATAGGTATTGCTGGCTCTTAACAGGGCAGTTAACATAGCTGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548792.1 |
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| CDS TCA 90 bp | TGCTTTAGACGTTATCCTCTTGCTCTAGATTCCTGGCAAGTCTTGTaGTGGTGCTATTATGTGACCATTTTGCCCATGAAGGAATCGAGG | + |
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Preference number: 5 (lower is better) Translates to: CFRRYPLALDSWQVL*WCYYVTILPMKESR Trigger: CCTCGATTCCTTCATGGGCAAAATGGTCACATAATAGCACCATCACAAGACTTGCCAGGAATCTAGAGCAAGAGGATAACGTCTAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS GCA 72 bp | GTTCTTCCAAGGCTGCACTCCCAGCGCAATTTCATTTaGAGGATACTTTCCTCATTGGCAATCCAGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: VLPRLHSQRNFI*RILSSLAIQGK Trigger: CTTGCCCTGGATTGCCAATGAGGAAAGTATCCTGCAAATGAAATTGCGCTGGGAGTGCAGCCTTGGAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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| CDS CAA 72 bp | TCCCAGCGCAATTTCATTTGCAGGATACTTTCCTCATaGGCAATCCAGGGCAAGGCTTCACACAGGCTATTG | + |
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Preference number: 6 (lower is better) Translates to: SQRNFICRILSS*AIQGKASHRLL Trigger: CAATAGCCTGTGTGAAGCCTTGCCCTGGATTGCCAATGAGGAAAGTATCCTGCAAATGAAATTGCGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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| CDS CAA 90 bp | AGGCTGCACTCCCAGCGCAATTTCATTTGCAGGATACTTTCCTCATaGGCAATCCAGGGCAAGGCTTCACACAGGCTATTGAAAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RLHSQRNFICRILSS*AIQGKASHRLLKRK Trigger: CTTTCTTTTCAATAGCCTGTGTGAAGCCTTGCCCTGGATTGCCAATGAGGAAAGTATCCTGCAAATGAAATTGCGCTGGGAGTGCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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| CDS TCA 72 bp | CAAGGGGAAAGAAGCCGGATGCTTTTTCACCTTAGGTaGAAGTCAGTAATTGGAGTTACCCTTTCTGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QGERSRMLFHLR*KSVIGVTLSEA Trigger: GGCCTCAGAAAGGGTAACTCCAATTACTGACTTTCACCTAAGGTGAAAAAGCATCCGGCTTCTTTCCCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS TCA 72 bp | GATGCTAAAACTAGTCGGGAGTCATACAACCCTACCTaGTGTCATGAAAGGGAAATGTGCTCCTGCTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: DAKTSRESYNPT*CHEREMCSCSQ Trigger: TTGAGAGCAGGAGCACATTTCCCTTTCATGACATCAGGTAGGGTTGTATGACTCCCGACTAGTTTTAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548792.1 |
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| CDS GCA 72 bp | TCAGTAATTGGAGTTACCCTTTCTGAGGCCCTGCTTTaGAGTATAACTGAGGATCAGGTGCTGTTCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVIGVTLSEALL*SITEDQVLFCF Trigger: GAAACAGAACAGCACCTGATCCTCAGTTATACTGCAAAGCAGGGCCTCAGAAAGGGTAACTCCAATTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS GCA 72 bp | TGGAAAGGATCTCAGGGGTCATATAGTTTAATCCCCTaGCACCTCATGTATGCATCTTTGGATGGGCATCTA | + |
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Preference number: 6 (lower is better) Translates to: WKGSQGSYSLIP*HLMYASLDGHL Trigger: TAGATGCCCATCCAAAGATGCATACATGAGGTGGCAGGGGATTAAACTATATGACCCCTGAGATCCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS CAA 90 bp | ACCACCACAAAATCTGATCTTCTTCAGGATCCAAGGCTGGGTAAGTaGTTCAAATCTGGCTCCTTGAATGCCTTTCTACCATGTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: TTTKSDLLQDPRLGK*FKSGSLNAFLPCLM Trigger: CATCAGACATGGTAGAAAGGCATTCAAGGAGCCAGATTTGAACAACTTACCCAGCCTTGGATCCTGAAGAAGATCAGATTTTGTGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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| CDS CAA 72 bp | GATCCAAGGCTGGGTAAGTTGTTCAAATCTGGCTCCTaGAATGCCTTTCTACCATGTCTGATGCCAAGTATA | + |
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Preference number: 6 (lower is better) Translates to: DPRLGKLFKSGS*NAFLPCLMPSI Trigger: TATACTTGGCATCAGACATGGTAGAAAGGCATTCAAGGAGCCAGATTTGAACAACTTACCCAGCCTTGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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| CDS CAA 90 bp | CTTCTTCAGGATCCAAGGCTGGGTAAGTTGTTCAAATCTGGCTCCTaGAATGCCTTTCTACCATGTCTGATGCCAAGTATATTCCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LLQDPRLGKLFKSGS*NAFLPCLMPSIFQK Trigger: CTTTTGGAATATACTTGGCATCAGACATGGTAGAAAGGCATTCAAGGAGCCAGATTTGAACAACTTACCCAGCCTTGGATCCTGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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| CDS GCA 72 bp | AACATAAGAAAGCCCACATCCTTCAGCTATGTTAACTaGCCTGTTAAGAGCCAGCAATACCTATGGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: NIRKPTSFSYVN*PVKSQQYLWSF Trigger: AAAGGACCATAGGTATTGCTGGCTCTTAACAGGGCAGTTAACATAGCTGAAGGATGTGGGCTTTCTTATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548792.1 |
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| CDS CCA 72 bp | AAAACAATGTCCAACTGGTCTGGTTTCTGGTCTCAATaGTACCAAAGGGATAGTCACCACCTCAATCAAACT | + |
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Preference number: 6 (lower is better) Translates to: KTMSNWSGFWSQ*YQRDSHHLNQT Trigger: AGTTTGATTGAGGTGGTGACTATCCCTTTGGTACCATTGAGACCAGAAACCAGACCAGTTGGACATTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS CCA 72 bp | TTTAATCCCCTGCCACCTCATGTATGCATCTTTGGATaGGCATCTATGGAAGGAGCTAGCCTGTATTTAATA | + |
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Preference number: 6 (lower is better) Translates to: FNPLPPHVCIFG*ASMEGASLYLI Trigger: TATTAAATACAGGCTAGCTCCTTCCATAGATGCCCATCCAAAGATGCATACATGAGGTGGCAGGGGATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548326.1 |
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| CDS CCA 72 bp | TATGTTAACTGCCCTGTTAAGAGCCAGCAATACCTATaGTCCTTTCTCCATGATCACTTAAATCCTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: YVNCPVKSQQYL*SFLHDHLNPEG Trigger: ACCCTCAGGATTTAAGTGATCATGGAGAAAGGACCATAGGTATTGCTGGCTCTTAACAGGGCAGTTAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548792.1 |
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| CDS CAA 72 bp | AAATCTGATCTTCTTCAGGATCCAAGGCTGGGTAAGTaGTTCAAATCTGGCTCCTTGAATGCCTTTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: KSDLLQDPRLGK*FKSGSLNAFLP Trigger: TGGTAGAAAGGCATTCAAGGAGCCAGATTTGAACAACTTACCCAGCCTTGGATCCTGAAGAAGATCAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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| CDS TCA 72 bp | AAGAGCACTGAAGTATGTGTGGTAAATGAACCACCTTaGGAAGCTGGTTTTAAGTTCATCTTCCAGAGACCA | + |
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Preference number: 6 (lower is better) Translates to: KSTEVCVVNEPP*EAGFKFIFQRP Trigger: TGGTCTCTGGAAGATGAACTTAAAACCAGCTTCTCAAGGTGGTTCATTTACCACACATACTTCAGTGCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548792.1 |
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| CDS CAA 90 bp | AAAGCCCCCGTGTCCCATGCACTGAAGAATAACAGCTATCATTTCTaGGAAGACAGACTCTGTGTTAAGTATTTTACATGTATCATCTCA | + |
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Preference number: 6 (lower is better) Translates to: KAPVSHALKNNSYHF*EDRLCVKYFTCIIS Trigger: TGAGATGATACATGTAAAATACTTAACACAGAGTCTGTCTTCCAAGAAATGATAGCTGTTATTCTTCAGTGCATGGGACACGGGGGCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546942.1 |
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