Pregenerated sensors for SRSF8 (Homo sapiens)
Ensembl gene IDs: ENSG00000263465Ensembl transcript IDs: ENST00000587424.3, ENST00000638426.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAACAACAAAATGTGGGATGTATATCTACAGACCACAGCCACCTTaGCAGTTCATTCAAGAATCGAACCCTGGATTTAGCAGTTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: ITTKCGMYIYRPQPP*QFIQESNPGFSSFC Trigger: GCAGAAACTGCTAAATCCAGGGTTCGATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACATTTTGTTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR GCA 90 bp | GATGTTCTACAGATATTTTTGCTTCAAAGCTTCAAACTCCAGCTATaGCTGGGTCTCATTCTATCCCCAGAAATTGACAATGCTTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: DVLQIFLLQSFKLQL*LGLILSPEIDNASL Trigger: TAGGGAAGCATTGTCAATTTCTGGGGATAGAATGAGACCCAGGCATAGCTGGAGTTTGAAGCTTTGAAGCAAAAATATCTGTAGAACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR TCA 90 bp | TATTTCCTGAATATGTCTATTTATGTCCATTTCCAACACTACCACTaGAGTCTAAGCCATTGTCACCTTTCTTTCTGGATTACTGCAATA | + |
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Preference number: 1 (lower is better) Translates to: YFLNMSIYVHFQHYH*SLSHCHLSFWITAI Trigger: TATTGCAGTAATCCAGAAAGAAAGGTGACAATGGCTTAGACTTCAGTGGTAGTGTTGGAAATGGACATAAATAGACATATTCAGGAAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR CCA 90 bp | TATATGAAAGCAATACTAACTACTAACTGTTATAACAACAAAATGTaGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCA | + |
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Preference number: 1 (lower is better) Translates to: YMKAILTTNCYNNKM*DVYLQTTATLPVHS Trigger: TGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACATTTTGTTGTTATAACAGTTAGTAGTTAGTATTGCTTTCATATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCTACCCTTAGGGCTGCCCCGTCCCCGTCCCACTCGGTCCCATTTAATAAATGAGGGGCTACTACGATaGCATGGGTGTCCTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: SLPLGLPRPRPTRSHLINEGLLR*HGCPDF Trigger: AAAATCAGGACACCCATGGCATCGTAGTAGCCCCTC...ATTTATTAAATGGGACCGAGTGGGACGGGGACGGGGCAGCCCTAAGGGTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR GCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCCCTCCCTTCGCCACCTaGTGGACGCGAGGGGCTACT | + |
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Preference number: 2 (lower is better) Translates to: KTCHITLLHGFMSSVGQVPPFAT*WTRGAT Trigger: AGTAGCCCCTCGCGTCCAGCAGGTGGCGAAGGGAGG...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR CCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCCCCTTCGCCACCTGCTaGACGCGAGGGGCTACTACG | + |
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Preference number: 2 (lower is better) Translates to: KTCHITLLHGFMSSVGQVPFATC*TRGATT Trigger: CGTAGTAGCCCCTCGCGTCCAGCAGGTGGCGAAGGG...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGCTGGTCTTGAGCTCCTaGCCTCAGGTGATCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: TASTLDHIHSILHSALIVLVLSS*PQVIHL Trigger: CAGGTGGATCACCTGAGGTCAGGAGCTCAAGACCAG...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCTACGCAGCCGGGCCTTTTCAATAGGCAGCCTCTTCTTCCAGGGACGTTGCAGTCCTCCATCACGTTaGTTCCTGATGCATCATTTT | + |
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Preference number: 2 (lower is better) Translates to: LLRSRAFSIGSLFFQGRCSPPSR*FLMHHF Trigger: AAAATGATGCATCAGGAAGCAACGTGATGGAGGACT...GCAACGTCCCTGGAAGAAGAGGCTGCCTATTGAAAAGGCCCGGCTGCGTAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638426.1 |
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| 3UTR-3UTR CCA 90 bp | AACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCTTCAGCCTCCGAGTAGCTaGGATTATAGGCATGCGCCA | + |
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Preference number: 2 (lower is better) Translates to: NMSHHSSSWVHVLCGSGLQPPSS*DYRHAP Trigger: TGGCGCATGCCTATAATCCCAGCTACTCGGAGGCTG...AAGACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGAAACGGCACATAGAATaGATTTTGCCACCTGATGCA | + |
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Preference number: 2 (lower is better) Translates to: TASTLDHIHSILHSALIVKRHIE*ILPPDA Trigger: TGCATCAGGTGGCAAAATTCATTCTATGTGCCGTTT...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCGTTGCTTCCATAGACTaGGTATGTGATCCTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: KTCHITLLHGFMSSVGQVVASID*VCDPFP Trigger: GGGAAAAGGATCACATACTCAGTCTATGGAAGCAAC...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR GCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCAGTCCTCCATCACGTTaGTTCCTGATGCATCATTTT | + |
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Preference number: 2 (lower is better) Translates to: KTCHITLLHGFMSSVGQVSPPSR*FLMHHF Trigger: AAAATGATGCATCAGGAAGCAACGTGATGGAGGACT...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR CAA 90 bp | GTCTATTTATGTCCATTTCCAACACTACCACTGAAGTCTAAGCCATaGTCACCTTTCTTTCTGGATTACTGCAATAGCCTCACAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VYLCPFPTLPLKSKP*SPFFLDYCNSLTAS Trigger: GGAAGCTGTGAGGCTATTGCAGTAATCCAGAAAGAAAGGTGACAATGGCTTAGACTTCAGTGGTAGTGTTGGAAATGGACATAAATAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR TCA 90 bp | AACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCTTAAAGGTAGAAAAGTGTaGCACAACCTTTTCAATAGG | + |
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Preference number: 2 (lower is better) Translates to: NMSHHSSSWVHVLCGSGLKGRKV*HNLFNR Trigger: CCTATTGAAAAGGTTGTGTCACACTTTTCTACCTTT...AAGACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR CCA 90 bp | TCACTAAACAGCACCGTCATCCATTTAGCATTTCAAGCCAGTGAGAAGTCATCCTGTCACCTTTCTTTCTaGATTACTGCAATAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLNSTVIHLAFQASEKSSCHLSF*ITAIAS Trigger: TGAGGCTATTGCAGTAATCCAGAAAGAAAGGTGACA...GGATGACTTCTCACTGGCTTGAAATGCTAAATGGATGACGGTGCTGTTTAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCAAGAATCTGCAAAGCTTCAAACTaGCAAAAAGGTAGAAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: MWDVYLQTTATLPVHSRICKASN*QKGRKV Trigger: CACTTTTCTACCTTTTTGCCAGTTTGAAGCTTTGCA...GATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR CAA 90 bp | AGCCGGGCCTTTTCAATAGGCAGCCTCTTCTTCCAGGGACGTTGCTTCCATAGAAAGTCCTCCATCACGTaGCTTCCTGATGCATCATTT | + |
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Preference number: 3 (lower is better) Translates to: SRAFSIGSLFFQGRCFHRKSSIT*LPDASF Trigger: AAATGATGCATCAGGAAGCAACGTGATGGAGGACTT...TCTATGGAAGCAACGTCCCTGGAAGAAGAGGCTGCCTATTGAAAAGGCCCGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638426.1 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGAAGTCCTCCATCACGTaGCTTCCTGATGCATCATTT | + |
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Preference number: 3 (lower is better) Translates to: TASTLDHIHSILHSALIVKSSIT*LPDASF Trigger: AAATGATGCATCAGGAAGCAACGTGATGGAGGACTT...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR CAA 90 bp | TCACTAAACAGCACCGTCATCCATTTAGCATTTCAAGCCAGTGAGAAGTCATCCATGTTGAAGCATGTCTaGACAGCGTTAGGCTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SLNSTVIHLAFQASEKSSMLKHV*TALGCV Trigger: CACACAGCCTAACGCTGTCAAGACATGCTTCAACAT...GGATGACTTCTCACTGGCTTGAAATGCTAAATGGATGACGGTGCTGTTTAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR CAA 90 bp | TCACTAAACAGCACCGTCATCCATTTAGCATTTCAAGCCAGTGAGAAGTCATCCTTCTATCCCCAGAAATaGACAATGCTTCCCTACCCT | + |
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Preference number: 3 (lower is better) Translates to: SLNSTVIHLAFQASEKSSFYPQK*TMLPYP Trigger: AGGGTAGGGAAGCATTGTCAATTTCTGGGGATAGAA...GGATGACTTCTCACTGGCTTGAAATGCTAAATGGATGACGGTGCTGTTTAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR GCA 72 bp | AAATGTGGGATGTATATCTACAGACCACAGCCACCTTaGCAGTTCATTCAAGAATCGAACCCTGGATTTAGC | + |
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Preference number: 3 (lower is better) Translates to: KCGMYIYRPQPP*QFIQESNPGFS Trigger: GCTAAATCCAGGGTTCGATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTTCATTCAAGAATCGAACCCTGGATTTAGCAGTTTCTGCACAAAGGGAATGAGATTAGACCTGTGTTaGCTAAAACCCCAGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: QFIQESNPGFSSFCTKGMRLDLC*LKPQSF Trigger: AAAGGACTGGGGTTTTAGCAAACACAGGTCTAATCT...CATTCCCTTTGTGCAGAAACTGCTAAATCCAGGGTTCGATTCTTGAATGAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR GCA 72 bp | CAGATATTTTTGCTTCAAAGCTTCAAACTCCAGCTATaGCTGGGTCTCATTCTATCCCCAGAAATTGACAAT | + |
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Preference number: 3 (lower is better) Translates to: QIFLLQSFKLQL*LGLILSPEIDN Trigger: ATTGTCAATTTCTGGGGATAGAATGAGACCCAGGCATAGCTGGAGTTTGAAGCTTTGAAGCAAAAATATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR TCA 72 bp | AATATGTCTATTTATGTCCATTTCCAACACTACCACTaGAGTCTAAGCCATTGTCACCTTTCTTTCTGGATT | + |
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Preference number: 3 (lower is better) Translates to: NMSIYVHFQHYH*SLSHCHLSFWI Trigger: AATCCAGAAAGAAAGGTGACAATGGCTTAGACTTCAGTGGTAGTGTTGGAAATGGACATAAATAGACATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | TCCCTACCCTTAGGGCTGCCCCGTCCCCGTCCCACTCGGTCCCATTTAATAAATCCCTTCGCCACCTGCTaGACGCGAGGGGCTACTACG | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLPRPRPTRSHLINPFATC*TRGATT Trigger: CGTAGTAGCCCCTCGCGTCCAGCAGGTGGCGAAGGG...ATTTATTAAATGGGACCGAGTGGGACGGGGACGGGGCAGCCCTAAGGGTAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | TCCCTACCCTTAGGGCTGCCCCGTCCCCGTCCCACTCGGTCCCATTTAATAAATTCGAGTGAGACCGGCTaGTGTGATATCGGCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLPRPRPTRSHLINSSETG*CDIGCS Trigger: GCTACAGCCGATATCACAGCAGCCGGTCTCACTCGA...ATTTATTAAATGGGACCGAGTGGGACGGGGACGGGGCAGCCCTAAGGGTAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | TCCCTACCCTTAGGGCTGCCCCGTCCCCGTCCCACTCGGTCCCATTTAATAAATTTCAAGCGATTATCCTaGCTCAGCCTCCGAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLPRPRPTRSHLINFKRLS*LSLRVA Trigger: AGCTACTCGGAGGCTGAGGCAGGATAATCGCTTGAA...ATTTATTAAATGGGACCGAGTGGGACGGGGACGGGGCAGCCCTAAGGGTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | CAGTTCATTCAAGAATCGAACCCTGGATTTAGCAGTTTCTGCACAAAGGGAATGCGTAGCCGCCGCCTCTaGACCTGCCGCGTGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QFIQESNPGFSSFCTKGMRSRRL*TCRVAL Trigger: GAGAGCCACGCGGCAGGTCCAGAGGCGGCGGCTACG...CATTCCCTTTGTGCAGAAACTGCTAAATCCAGGGTTCGATTCTTGAATGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | CTGCTACGCAGCCGGGCCTTTTCAATAGGCAGCCTCTTCTTCCAGGGACGTTGCGTTGCTTCCATAGACTaGGTATGTGATCCTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LLRSRAFSIGSLFFQGRCVASID*VCDPFP Trigger: GGGAAAAGGATCACATACTCAGTCTATGGAAGCAAC...GCAACGTCCCTGGAAGAAGAGGCTGCCTATTGAAAAGGCCCGGCTGCGTAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638426.1 |
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| CDS-3UTR CCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCACCGCGAGCGAGACCTaGAGACCGAGGAGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: KTCHITLLHGFMSSVGQVTASET*RPRRTW Trigger: CCAAGTCCTCCTCGGTCTCCAGGTCTCGCTCGCGGT...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | TCCCTACCCTTAGGGCTGCCCCGTCCCCGTCCCACTCGGTCCCATTTAATAAATCATCACTCTTCTTCATaGGTTCATGTCCTCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLPRPRPTRSHLINHHSSS*VHVLCG Trigger: CCCACAGAGGACATGAACCCATGAAGAAGAGTGATG...ATTTATTAAATGGGACCGAGTGGGACGGGGACGGGGCAGCCCTAAGGGTAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | TCCCTACCCTTAGGGCTGCCCCGTCCCCGTCCCACTCGGTCCCATTTAATAAATGTTGCTTCCATAGACTaGGTATGTGATCCTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLPRPRPTRSHLINVASID*VCDPFP Trigger: GGGAAAAGGATCACATACTCAGTCTATGGAAGCAAC...ATTTATTAAATGGGACCGAGTGGGACGGGGACGGGGCAGCCCTAAGGGTAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | AACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCTTAGGCGCGAGCCACCATaGCCGGCCACAGGTTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: NMSHHSSSWVHVLCGSGLRREPP*PATGFK Trigger: TTTGAAACCTGTGGCCGGGCATGGTGGCTCGCGCCT...AAGACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | AACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCTTTTGCCCCGGCTGGAGTaGAATGGCGTGATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: NMSHHSSSWVHVLCGSGLLPRLE*NGVISA Trigger: AGCCGAGATCACGCCATTGCACTCCAGCCGGGGCAA...AAGACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | TCCCTACCCTTAGGGCTGCCCCGTCCCCGTCCCACTCGGTCCCATTTAATAAATAGTCCTCCATCACGTTaGTTCCTGATGCATCATTTT | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLPRPRPTRSHLINSPPSR*FLMHHF Trigger: AAAATGATGCATCAGGAAGCAACGTGATGGAGGACT...ATTTATTAAATGGGACCGAGTGGGACGGGGACGGGGCAGCCCTAAGGGTAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | ATGTGGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCAAGAATCCCGGCTGGAGTGCAATaGCGTGATCTCGGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: MWDVYLQTTATLPVHSRIPAGVQ*RDLGSP Trigger: TGGTGAGCCGAGATCACGCCATTGCACTCCAGCCGG...GATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | TCCCTACCCTTAGGGCTGCCCCGTCCCCGTCCCACTCGGTCCCATTTAATAAATAAGGATAAAATGGTGTaGCCAGTTAGCTCAGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLPRPRPTRSHLINKDKMV*PVSSVG Trigger: ACCAACTGAGCTAACTGGCCACACCATTTTATCCTT...ATTTATTAAATGGGACCGAGTGGGACGGGGACGGGGCAGCCCTAAGGGTAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGGTTACTGTAACCAGATaGGCTGTAGTGAGATCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TASTLDHIHSILHSALIVVTVTR*AVVRSA Trigger: GGCGGATCTCACTACAGCTCATCTGGTTACAGTAAC...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | TCACTAAACAGCACCGTCATCCATTTAGCATTTCAAGCCAGTGAGAAGTCATCCCTGGTCTTGAGCTCCTaGCCTCAGGTGATCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: SLNSTVIHLAFQASEKSSLVLSS*PQVIHL Trigger: CAGGTGGATCACCTGAGGTCAGGAGCTCAAGACCAG...GGATGACTTCTCACTGGCTTGAAATGCTAAATGGATGACGGTGCTGTTTAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | CAGTTCATTCAAGAATCGAACCCTGGATTTAGCAGTTTCTGCACAAAGGGAATGTATAGCGAGATCGGCTaGGGGACCTGGAGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QFIQESNPGFSSFCTKGMYSEIG*GTWSSW Trigger: CCAGCTGCTCCAGGTCCCGCAGCCGATCTCGCTATA...CATTCCCTTTGTGCAGAAACTGCTAAATCCAGGGTTCGATTCTTGAATGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCGCGCAGAGCTCGATTTaGAGGTTGATGCAGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KTCHITLLHGFMSSVGQVAQSSI*RLMQSE Trigger: CTCGCTCTGCATCAACCTCCAAATCGAGCTCTGCGC...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGAACTCCAGCTATGCCTaGGTCTCATTCTATCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TASTLDHIHSILHSALIVNSSYA*VSFYPQ Trigger: CTGGGGATAGAATGAGACCCAGGCATAGCTGGAGTT...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | AGCCGGGCCTTTTCAATAGGCAGCCTCTTCTTCCAGGGACGTTGCTTCCATAGAAGTCCTCCATCACGTTaGTTCCTGATGCATCATTTT | + |
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Preference number: 4 (lower is better) Translates to: SRAFSIGSLFFQGRCFHRSPPSR*FLMHHF Trigger: AAAATGATGCATCAGGAAGCAACGTGATGGAGGACT...TCTATGGAAGCAACGTCCCTGGAAGAAGAGGCTGCCTATTGAAAAGGCCCGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638426.1 |
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| CDS-3UTR GCA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGAGACCACAGCCACCTTaGCAGTTCATTCAAGAATCG | + |
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Preference number: 4 (lower is better) Translates to: TASTLDHIHSILHSALIVRPQPP*QFIQES Trigger: CGATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCT...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | ATGTGGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCAAGAATCCAGCCTCCGAGTAGCTaGGATTATAGGCATGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: MWDVYLQTTATLPVHSRIQPPSS*DYRHAP Trigger: TGGCGCATGCCTATAATCCCAGCTACTCGGAGGCTG...GATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| 3UTR CAA 72 bp | TTCTGGATTACTGCAATAGCCTCACAGCTTCCACTCTaGACCACATACACTCCATTCTGCACTCAGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: FWITAIASQLPL*TTYTPFCTQPS Trigger: TGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGTGAGGCTATTGCAGTAATCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | ATGTGGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCAAGAATCGCTCGATTTGGAGGTTaGTGCAGAGCGAGAGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: MWDVYLQTTATLPVHSRIARFGG*CRARAS Trigger: ACTAGCTCTCGCTCTGCATCAACCTCCAAATCGAGC...GATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGTCTATCCCCAGAAATTaGCAATGCTTCCCTACCCTT | + |
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Preference number: 4 (lower is better) Translates to: TASTLDHIHSILHSALIVSIPRN*QCFPTL Trigger: AAGGGTAGGGAAGCATTGTCAATTTCTGGGGATAGA...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGTTTCTCAGACAGGACTaGTCTGTGTGTGTCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: TASTLDHIHSILHSALIVFLRQD*SVCVFG Trigger: TCCAAAGACACACACAGAGCAGTCCTGTCTGAGAAA...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCGAGGGGCTACTACGATaGCATGGGTGTCCTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: KTCHITLLHGFMSSVGQVEGLLR*HGCPDF Trigger: AAAATCAGGACACCCATGGCATCGTAGTAGCCCCTC...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | AACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCTTATCGCGACCTTGACTTaGATTTCCTCTTGGATACCC | + |
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Preference number: 4 (lower is better) Translates to: NMSHHSSSWVHVLCGSGLIATLT*ISSWIP Trigger: GGGTATCCAAGAGGAAATCCAAGTCAAGGTCGCGAT...AAGACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | TCACTAAACAGCACCGTCATCCATTTAGCATTTCAAGCCAGTGAGAAGTCATCCGGTTCATGTCCTCTGTaGGTCAGGTCTTCCACATGT | + |
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Preference number: 4 (lower is better) Translates to: SLNSTVIHLAFQASEKSSGSCPL*VRSSTC Trigger: ACATGTGGAAGACCTGACCCACAGAGGACATGAACC...GGATGACTTCTCACTGGCTTGAAATGCTAAATGGATGACGGTGCTGTTTAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | AACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCTTTTCCAACACTACCACTaGAGTCTAAGCCATTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: NMSHHSSSWVHVLCGSGLFQHYH*SLSHCH Trigger: GTGACAATGGCTTAGACTTCAGTGGTAGTGTTGGAA...AAGACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | CAGTTCATTCAAGAATCGAACCCTGGATTTAGCAGTTTCTGCACAAAGGGAATGCACAGCTTCCACTCTTaGCCACATACACTCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: QFIQESNPGFSSFCTKGMHSFHS*PHTLHS Trigger: AGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGTG...CATTCCCTTTGTGCAGAAACTGCTAAATCCAGGGTTCGATTCTTGAATGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | ATGTGGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCAAGAATCAAACGGCACATAGAATaGATTTTGCCACCTGATGCA | + |
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Preference number: 4 (lower is better) Translates to: MWDVYLQTTATLPVHSRIKRHIE*ILPPDA Trigger: TGCATCAGGTGGCAAAATTCATTCTATGTGCCGTTT...GATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCAGCATTTCAAGCCAGTaGGAAGTCATCCTTAATTCT | + |
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Preference number: 4 (lower is better) Translates to: KTCHITLLHGFMSSVGQVSISSQ*EVILNS Trigger: AGAATTAAGGATGACTTCTCACTGGCTTGAAATGCT...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR GCA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGATAAACTCAGCCACATaGAACAATACAGAGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: TASTLDHIHSILHSALIVINSAT*NNTENL Trigger: AAGATTCTCTGTATTGTTGCATGTGGCTGAGTTTAT...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CCA 90 bp | AAAACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCTGCAAAGCTTCAAACTaGCAAAAAGGTAGAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: KTCHITLLHGFMSSVGQVCKASN*QKGRKV Trigger: CACTTTTCTACCTTTTTGCCAGTTTGAAGCTTTGCA...GACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | ATGTGGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCAAGAATCAAAGGTAGAAAAGTGTaGCACAACCTTTTCAATAGG | + |
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Preference number: 4 (lower is better) Translates to: MWDVYLQTTATLPVHSRIKGRKV*HNLFNR Trigger: CCTATTGAAAAGGTTGTGTCACACTTTTCTACCTTT...GATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR TCA 90 bp | ATGTGGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCAAGAATCCTTATAAATGATGACTaGCCCACTATCAAGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: MWDVYLQTTATLPVHSRILINDD*PTIKES Trigger: ACTTTCCTTGATAGTGGGTCAGTCATCATTTATAAG...GATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CAA 90 bp | CTGCTACGCAGCCGGGCCTTTTCAATAGGCAGCCTCTTCTTCCAGGGACGTTGCAAGTCCTCCATCACGTaGCTTCCTGATGCATCATTT | + |
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Preference number: 5 (lower is better) Translates to: LLRSRAFSIGSLFFQGRCKSSIT*LPDASF Trigger: AAATGATGCATCAGGAAGCAACGTGATGGAGGACTT...GCAACGTCCCTGGAAGAAGAGGCTGCCTATTGAAAAGGCCCGGCTGCGTAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638426.1 |
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| CDS-3UTR CAA 90 bp | ATGTGGGATGTATATCTACAGACCACAGCCACCTTGCCAGTTCATTCAAGAATCGAGACCGAGGAGGACTaGGATCGTCGCGCAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: MWDVYLQTTATLPVHSRIETEED*DRRAEL Trigger: GAGCTCTGCGCGACGATCCAAGTCCTCCTCGGTCTC...GATTCTTGAATGAACTGGCAAGGTGGCTGTGGTCTGTAGATATACATCCCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CAA 90 bp | ACAGCTTCCACTCTTGACCACATACACTCCATTCTGCACTCAGCCCTCATAGTGTTCTATCCCCAGAAATaGACAATGCTTCCCTACCCT | + |
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Preference number: 5 (lower is better) Translates to: TASTLDHIHSILHSALIVFYPQK*TMLPYP Trigger: AGGGTAGGGAAGCATTGTCAATTTCTGGGGATAGAA...CACTATGAGGGCTGAGTGCAGAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CAA 90 bp | CAGTTCATTCAAGAATCGAACCCTGGATTTAGCAGTTTCTGCACAAAGGGAATGATGTTGAAGCATGTCTaGACAGCGTTAGGCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: QFIQESNPGFSSFCTKGMMLKHV*TALGCV Trigger: CACACAGCCTAACGCTGTCAAGACATGCTTCAACAT...CATTCCCTTTGTGCAGAAACTGCTAAATCCAGGGTTCGATTCTTGAATGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CAA 90 bp | AACATGTCACATCACTCTTCTTCATGGGTTCATGTCCTCTGTGGGTCAGGTCTTAGATTAGACCTGTGTTaGCTAAAACCCCAGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: NMSHHSSSWVHVLCGSGLRLDLC*LKPQSF Trigger: AAAGGACTGGGGTTTTAGCAAACACAGGTCTAATCT...AAGACCTGACCCACAGAGGACATGAACCCATGAAGAAGAGTGATGTGACATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CAA 90 bp | CAGTTCATTCAAGAATCGAACCCTGGATTTAGCAGTTTCTGCACAAAGGGAATGTCACAGCTTCCACTCTaGACCACATACACTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: QFIQESNPGFSSFCTKGMSQLPL*TTYTPF Trigger: GAATGGAGTGTATGTGGTCAAGAGTGGAAGCTGTGA...CATTCCCTTTGTGCAGAAACTGCTAAATCCAGGGTTCGATTCTTGAATGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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| CDS-3UTR CAA 90 bp | CAGTTCATTCAAGAATCGAACCCTGGATTTAGCAGTTTCTGCACAAAGGGAATGAAGTCCTCCATCACGTaGCTTCCTGATGCATCATTT | + |
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Preference number: 5 (lower is better) Translates to: QFIQESNPGFSSFCTKGMKSSIT*LPDASF Trigger: AAATGATGCATCAGGAAGCAACGTGATGGAGGACTT...CATTCCCTTTGTGCAGAAACTGCTAAATCCAGGGTTCGATTCTTGAATGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587424.3 |
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