Pregenerated sensors for SRSF6 (Homo sapiens)
Ensembl gene IDs: ENSG00000124193Ensembl transcript IDs: ENST00000244020.5, ENST00000483871.6, ENST00000662078.1, ENST00000668808.1, ENST00000670741.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGCTTTCCAGTCACACCTGTGGCACAATGAGCAGTGTACGACCATaGCCCATCACAATCCAACCCTTGGTACCCTACATTGTGACACCT | + |
|
Preference number: 1 (lower is better) Translates to: MLSSHTCGTMSSVRP*PITIQPLVPYIVTP Trigger: AGGTGTCACAATGTAGGGTACCAAGGGTTGGATTGTGATGGGGCATGGTCGTACACTGCTCATTGTGCCACAGGTGTGACTGGAAAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR TCA 90 bp | ACCAACCCTAGAATATCATGCTTTCCAGTCACACCTGTGGCACAATaGGCAGTGTACGACCATGCCCCATCACAATCCAACCCTTGGTAC | + |
|
Preference number: 1 (lower is better) Translates to: TNPRISCFPVTPVAQ*AVYDHAPSQSNPWY Trigger: GTACCAAGGGTTGGATTGTGATGGGGCATGGTCGTACACTGCTCATTGTGCCACAGGTGTGACTGGAAAGCATGATATTCTAGGGTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR CCA 90 bp | ATCTACAAACCAACCCTAGAATATCATGCTTTCCAGTCACACCTGTaGCACAATGAGCAGTGTACGACCATGCCCCATCACAATCCAACC | + |
|
Preference number: 1 (lower is better) Translates to: IYKPTLEYHAFQSHL*HNEQCTTMPHHNPT Trigger: GGTTGGATTGTGATGGGGCATGGTCGTACACTGCTCATTGTGCCACAGGTGTGACTGGAAAGCATGATATTCTAGGGTTGGTTTGTAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR CCA 90 bp | TATCCACCTCCACCACATCACAGTGTGAGGTTTTTGGTGGTGGTTTaGCCACAAAACACGCAAGGTAACAGTCACCTAGTTCAGATTAAC | + |
|
Preference number: 1 (lower is better) Translates to: YPPPPHHSVRFLVVV*PQNTQGNSHLVQIN Trigger: GTTAATCTGAACTAGGTGACTGTTACCTTGCGTGTTTTGTGGCCAAACCACCACCAAAAACCTCACACTGTGATGTGGTGGAGGTGGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483871.6 |
||
| 3UTR CCA 90 bp | GCCCTGACTGTTAATAAATTGGTCGTGGCTATTACTAGAAAATTATaGGTGCAGGCATTTACCTATACAATGACCTGCTTACTGTGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: ALTVNKLVVAITRKL*VQAFTYTMTCLLWQ Trigger: CTGCCACAGTAAGCAGGTCATTGTATAGGTAAATGCCTGCACCCATAATTTTCTAGTAATAGCCACGACCAATTTATTAACAGTCAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR CCA 90 bp | ACCAATTATCAAATAATCCCACTAACTACAAAGGGGACTGACTACTaGGTGGAACTTAACTGGCAACTGACTTTACTGAGATTAAGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: TNYQIIPLTTKGTDY*VELNWQLTLLRLSA Trigger: GGCACTTAATCTCAGTAAAGTCAGTTGCCAGTTAAGTTCCACCCAGTAGTCAGTCCCCTTTGTAGTTAGTGGGATTATTTGATAATTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR TCA 90 bp | AACATAAACCATATACTAAATCCCAAACTCACGTTTCTGGGTAAGTaGACACAAGATCCTGTTCTCATACTCAAGACAGGAATGGCTTGC | + |
|
Preference number: 1 (lower is better) Translates to: NINHILNPKLTFLGK*TQDPVLILKTGMAC Trigger: GCAAGCCATTCCTGTCTTGAGTATGAGAACAGGATCTTGTGTTCACTTACCCAGAAACGTGAGTTTGGGATTTAGTATATGGTTTATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR TCA 90 bp | AAAAGAGGCTACTTCCATTTCCACATGACAAACATTAAAGACAACTaGACCACTCTCAACACTAATTATGCTGAGAACTTCCAGAAAGTG | + |
|
Preference number: 1 (lower is better) Translates to: KRGYFHFHMTNIKDN*TTLNTNYAENFQKV Trigger: CACTTTCTGGAAGTTCTCAGCATAATTAGTGTTGAGAGTGGTTCAGTTGTCTTTAATGTTTGTCATGTGGAAATGGAAGTAGCCTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR GCA 90 bp | AAGGTATCTGAACAAAGGGATGTAAGGTTAATTCACTTCTCAAACTaGAATTTCAACTCATCAGGCTTATGGATGTATGGACTAATTGCT | + |
|
Preference number: 1 (lower is better) Translates to: KVSEQRDVRLIHFSN*NFNSSGLWMYGLIA Trigger: AGCAATTAGTCCATACATCCATAAGCCTGATGAGTTGAAATTGCAGTTTGAGAAGTGAATTAACCTTACATCCCTTTGTTCAGATACCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR GCA 90 bp | CAAGGCCTTTTTCACATTACCAAGAACTCACAGCTACTCTGTGAATaGCCTAGATATTTGACTCAAATTTTTCACTCAATCTTATTAGGT | + |
|
Preference number: 1 (lower is better) Translates to: QGLFHITKNSQLLCE*PRYLTQIFHSILLG Trigger: ACCTAATAAGATTGAGTGAAAAATTTGAGTCAAATATCTAGGGCATTCACAGAGTAGCTGTGAGTTCTTGGTAATGTGAAAAAGGCCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR CCA 90 bp | AGGTTAATTCACTTCTCAAACTGCAATTTCAACTCATCAGGCTTATaGATGTATGGACTAATTGCTAACCTAGTAACTCCTACAAATTTG | + |
|
Preference number: 1 (lower is better) Translates to: RLIHFSNCNFNSSGL*MYGLIANLVTPTNL Trigger: CAAATTTGTAGGAGTTACTAGGTTAGCAATTAGTCCATACATCCATAAGCCTGATGAGTTGAAATTGCAGTTTGAGAAGTGAATTAACCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR CAA 90 bp | GGCACAATGAGCAGTGTACGACCATGCCCCATCACAATCCAACCCTaGGTACCCTACATTGTGACACCTCCTAGAAAGGTATTAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GTMSSVRPCPITIQP*VPYIVTPPRKVLKL Trigger: CAGCTTTAATACCTTTCTAGGAGGTGTCACAATGTAGGGTACCAAGGGTTGGATTGTGATGGGGCATGGTCGTACACTGCTCATTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGGAAGGTGGTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGGACAAGGGGACTGACTACTaGGTGGAACTTAACTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GRKVVTQEWERKSQSRQDKGTDY*VELNWQ Trigger: TTGCCAGTTAAGTTCCACCCAGTAGTCAGTCCCCTT...GTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR-3UTR TCA 90 bp | ATTTACCTATACAATGACCTGCTTACTGTGGCAGCTAACAATATAGTCAAACCAACACCTGTGGCACAATaGGCAGTGTACGACCATGCC | + |
|
Preference number: 2 (lower is better) Translates to: IYLYNDLLTVAANNIVKPTPVAQ*AVYDHA Trigger: GGCATGGTCGTACACTGCTCATTGTGCCACAGGTGT...TGGTTTGACTATATTGTTAGCTGCCACAGTAAGCAGGTCATTGTATAGGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGGAAGGTGGTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGGACTTCTCACTTCTTTTCTaGTCCACCTTAATACTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GRKVVTQEWERKSQSRQDFSLLF*STLILH Trigger: ATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAA...GTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| 3UTR-3UTR CCA 90 bp | ATTCATTCAACAGTAACCAGCCAGCCATTTAAAGCCGATCTCTGTATTACCATGGAAGCATCCGCCTTTTaGGGCACTATATTCCTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IHSTVTSQPFKADLCITMEASAF*GTIFLR Trigger: CCTTAGGAATATAGTGCCCCAAAAGGCGGATGCTTC...CATGGTAATACAGAGATCGGCTTTAAATGGCTGGCTGGTTACTGTTGAATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR-3UTR CCA 90 bp | ATTTACCTATACAATGACCTGCTTACTGTGGCAGCTAACAATATAGTCAAACCATTCCAGTCACACCTGTaGCACAATGAGCAGTGTACG | + |
|
Preference number: 2 (lower is better) Translates to: IYLYNDLLTVAANNIVKPFQSHL*HNEQCT Trigger: CGTACACTGCTCATTGTGCCACAGGTGTGACTGGAA...TGGTTTGACTATATTGTTAGCTGCCACAGTAAGCAGGTCATTGTATAGGTAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR-3UTR GCA 90 bp | ATTTACCTATACAATGACCTGCTTACTGTGGCAGCTAACAATATAGTCAAACCAAACCCTAGAATATCATaGTTTCCAGTCACACCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IYLYNDLLTVAANNIVKPNPRIS*FPVTPV Trigger: CACAGGTGTGACTGGAAAGCATGATATTCTAGGGTT...TGGTTTGACTATATTGTTAGCTGCCACAGTAAGCAGGTCATTGTATAGGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR GCA 72 bp | AGTCACACCTGTGGCACAATGAGCAGTGTACGACCATaGCCCATCACAATCCAACCCTTGGTACCCTACATT | + |
|
Preference number: 3 (lower is better) Translates to: SHTCGTMSSVRP*PITIQPLVPYI Trigger: AATGTAGGGTACCAAGGGTTGGATTGTGATGGGGCATGGTCGTACACTGCTCATTGTGCCACAGGTGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR TCA 72 bp | AGAATATCATGCTTTCCAGTCACACCTGTGGCACAATaGGCAGTGTACGACCATGCCCCATCACAATCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RISCFPVTPVAQ*AVYDHAPSQSN Trigger: GTTGGATTGTGATGGGGCATGGTCGTACACTGCTCATTGTGCCACAGGTGTGACTGGAAAGCATGATATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR CCA 72 bp | CCACCACATCACAGTGTGAGGTTTTTGGTGGTGGTTTaGCCACAAAACACGCAAGGTAACAGTCACCTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPHHSVRFLVVV*PQNTQGNSHLV Trigger: AACTAGGTGACTGTTACCTTGCGTGTTTTGTGGCCAAACCACCACCAAAAACCTCACACTGTGATGTGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483871.6 |
||
| 3UTR CCA 72 bp | CAAATAATCCCACTAACTACAAAGGGGACTGACTACTaGGTGGAACTTAACTGGCAACTGACTTTACTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QIIPLTTKGTDY*VELNWQLTLLR Trigger: TCTCAGTAAAGTCAGTTGCCAGTTAAGTTCCACCCAGTAGTCAGTCCCCTTTGTAGTTAGTGGGATTATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR CCA 72 bp | TCTTTTCTGCTCCACCTTAATACTCCATCTAGCCACTaGTATGGAGCATGTCATCAACTCATTCTTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SFLLHLNTPSSH*YGACHQLILLT Trigger: TGTGAGAAGAATGAGTTGATGACATGCTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR TCA 72 bp | CATATACTAAATCCCAAACTCACGTTTCTGGGTAAGTaGACACAAGATCCTGTTCTCATACTCAAGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HILNPKLTFLGK*TQDPVLILKTG Trigger: TCCTGTCTTGAGTATGAGAACAGGATCTTGTGTTCACTTACCCAGAAACGTGAGTTTGGGATTTAGTATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR CCA 72 bp | CACTTCTCAAACTGCAATTTCAACTCATCAGGCTTATaGATGTATGGACTAATTGCTAACCTAGTAACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HFSNCNFNSSGL*MYGLIANLVTP Trigger: AGGAGTTACTAGGTTAGCAATTAGTCCATACATCCATAAGCCTGATGAGTTGAAATTGCAGTTTGAGAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR GCA 72 bp | GAACAAAGGGATGTAAGGTTAATTCACTTCTCAAACTaGAATTTCAACTCATCAGGCTTATGGATGTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: EQRDVRLIHFSN*NFNSSGLWMYG Trigger: TCCATACATCCATAAGCCTGATGAGTTGAAATTGCAGTTTGAGAAGTGAATTAACCTTACATCCCTTTGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| 3UTR TCA 72 bp | GTAAGTATTTTATTGAGATTTAAAGCACAAAATAGGTaGACAAATCGGGAGGAAGGTGGTAACACAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: VSILLRFKAQNR*TNREEGGNTGM Trigger: CATTCCTGTGTTACCACCTTCCTCCCGATTTGTTCACCTATTTTGTGCTTTAAATCTCAATAAAATACTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAAGGTGGTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGGACATCCACCTCCACCACTaGGGCTTCCGTAGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRKVVTQEWERKSQSRQDIHLHH*GFRSCS Trigger: GCTACAGCTACGGAAGCCGCAGTGGTGGAGGTGGAT...GTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR GCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGATCCACCTCCACCACTaGGGCTTCCGTAGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTIHLHH*GFRSCS Trigger: GCTACAGCTACGGAAGCCGCAGTGGTGGAGGTGGAT...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR GCA 90 bp | TTCTCACTTCTTTTCTGCTCCACCTTAATACTCCATCTAGCCACTGGTATGGAGATCCACCTCCACCACTaGGGCTTCCGTAGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFCSTLILHLATGMEIHLHH*GFRSCS Trigger: GCTACAGCTACGGAAGCCGCAGTGGTGGAGGTGGAT...CTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| 3UTR CAA 72 bp | AGCAGTGTACGACCATGCCCCATCACAATCCAACCCTaGGTACCCTACATTGTGACACCTCCTAGAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPCPITIQP*VPYIVTPPRKV Trigger: TACCTTTCTAGGAGGTGTCACAATGTAGGGTACCAAGGGTTGGATTGTGATGGGGCATGGTCGTACACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | CACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAACTTTGCTCCGCGACCTaGAACGGGAGCGACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRNGNVKVKVGRTQTGHKLCSAT*NGSDFL Trigger: CAAAAAGTCGCTCCCGTTCCAGGTCGCGGAGCAAAG...TTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000244020.5 ENST00000668808.1 |
||
| CDS-3UTR TCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGTGTGCATCCAGTGACTaGGAACTACAGGCAAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTCASSD*ELQARI Trigger: TATCCTTGCCTGTAGTTCTCAGTCACTGGATGCACA...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | ATCCCACTAACTACAAAGGGGACTGACTACTGGGTGGAACTTAACTGGCAACTGAAGGGGACTGACTACTaGGTGGAACTTAACTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IPLTTKGTDYWVELNWQLKGTDY*VELNWQ Trigger: TTGCCAGTTAAGTTCCACCCAGTAGTCAGTCCCCTT...CAGTTGCCAGTTAAGTTCCACCCAGTAGTCAGTCCCCTTTGTAGTTAGTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTCCACCTTAATACTCCATCTAGCCACTGGTATGGAGCATGTCATCAACTCGAAGCATCCGCCTTTTaGGGCACTATATTCCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHLNTPSSHWYGACHQLEASAF*GTIFLR Trigger: CCTTAGGAATATAGTGCCCCAAAAGGCGGATGCTTC...GAGTTGATGACATGCTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | ATCGGGAGGAAGGTGGTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGTCTAGAACGGGATCTTaGAGTAGCTCTTTTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGRKVVTQEWERKSQSRQSRTGS*SSSFWW Trigger: CCACCAAAAAGAGCTACTTCAAGATCCCGTTCTAGA...CTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGTGGTACCCTACATTGTaGCACCTCCTAGAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTWYPTL*HLLERY Trigger: ATACCTTTCTAGGAGGTGTCACAATGTAGGGTACCA...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATTCAACAGTAACCAGCCAGCCATTTAAAGCCGATCTCTGTATTACCATGACACCTGTGGCACAATaGGCAGTGTACGACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IHSTVTSQPFKADLCITMTPVAQ*AVYDHA Trigger: GGCATGGTCGTACACTGCTCATTGTGCCACAGGTGT...CATGGTAATACAGAGATCGGCTTTAAATGGCTGGCTGGTTACTGTTGAATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | ATCCCACTAACTACAAAGGGGACTGACTACTGGGTGGAACTTAACTGGCAACTGCATTTACCTATACAATaGCCTGCTTACTGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPLTTKGTDYWVELNWQLHLPIQ*PAYCGS Trigger: GCTGCCACAGTAAGCAGGTCATTGTATAGGTAAATG...CAGTTGCCAGTTAAGTTCCACCCAGTAGTCAGTCCCCTTTGTAGTTAGTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGACGTTTCTGGGTAAGTaGACACAAGATCCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTTFLGK*TQDPVL Trigger: GAGAACAGGATCTTGTGTTCACTTACCCAGAAACGT...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR GCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGTATCAGTCAACCCTATaGTCACCAAGTGAGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTYQSTL*SPSEPM Trigger: CATTGGCTCACTTGGTGAGCATAGGGTTGACTGATA...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATTCAACAGTAACCAGCCAGCCATTTAAAGCCGATCTCTGTATTACCATGCTTTGCTCCGCGACCTaGAACGGGAGCGACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHSTVTSQPFKADLCITMLCSAT*NGSDFL Trigger: CAAAAAGTCGCTCCCGTTCCAGGTCGCGGAGCAAAG...CATGGTAATACAGAGATCGGCTTTAAATGGCTGGCTGGTTACTGTTGAATGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCACTTCTTTTCTGCTCCACCTTAATACTCCATCTAGCCACTGGTATGGAGTTCCAGTCACACCTGTaGCACAATGAGCAGTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFCSTLILHLATGMEFQSHL*HNEQCT Trigger: CGTACACTGCTCATTGTGCCACAGGTGTGACTGGAA...CTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGACTCCATCTAGCCACTaGTATGGAGCATGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTTPSSH*YGACHQ Trigger: TTGATGACATGCTCCATACCAGTGGCTAGATGGAGT...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR CCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGTACTCAAGACAGGAATaGCTTGCCAATGCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTYSRQE*LANANS Trigger: GGAGTTTGCATTGGCAAGCCATTCCTGTCTTGAGTA...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | GTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCAGCAAACAAGGAGTTCTaGGTTAATCTCTGGAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: VTQEWERKSQSRQDSNWPANKEF*VNLWNS Trigger: CGAGTTCCAGAGATTAACTCAGAACTCCTTGTTTGC...TGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR GCA 90 bp | TCTCACAAGCTAGCAAGGGAATTAAACATTTTATCAGTCAACCCTATGCTCACCAGCAGTGTACGACCATaGCCCATCACAATCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SHKLARELNILSVNPMLTSSVRP*PITIQP Trigger: GGGTTGGATTGTGATGGGGCATGGTCGTACACTGCT...GGTGAGCATAGGGTTGACTGATAAAATGTTTAATTCCCTTGCTAGCTTGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAAGGTGGTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGGACCAGCTACTCTGTGAATaGCCTAGATATTTGACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRKVVTQEWERKSQSRQDQLLCE*PRYLTQ Trigger: TTGAGTCAAATATCTAGGGCATTCACAGAGTAGCTG...GTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAAGGTGGTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGGACTGTATTAAAGCAAACTaGAGACTACTACTCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRKVVTQEWERKSQSRQDCIKAN*RLLLRA Trigger: TGCCCTGAGTAGTAGTCTGCAGTTTGCTTTAATACA...GTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGACTCAAACTGGCCATAAAGGCACTACGGCATGTTCATAAACACCATCAAACTCCATCTAGCCACTaGTATGGAGCATGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKLAIKALRHVHKHHQTPSSH*YGACHQ Trigger: TTGATGACATGCTCCATACCAGTGGCTAGATGGAGT...TTGATGGTGTTTATGAACATGCCGTAGTGCCTTTATGGCCAGTTTGAGTCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR TCA 90 bp | GAACACAAGATCCTGTTCTCATACTCAAGACAGGAATGGCTTGCCAATGCAAACATTTTGTGCATCCAGTaGCTGAGAACTACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EHKILFSYSRQEWLANANILCIQ*LRTTGK Trigger: CTTGCCTGTAGTTCTCAGTCACTGGATGCACAAAAT...GTTTGCATTGGCAAGCCATTCCTGTCTTGAGTATGAGAACAGGATCTTGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGGTGGTAACACAGGAATaGGAACGTAAAAGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTVVTQE*ERKSQS Trigger: ACTTTGACTTTTACGTTCCCATTCCTGTGTTACCAC...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR CCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGTTATCCCTAGTTTCATaGATGACACTGAAGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTLSLVS*MTLKHS Trigger: ACTGTGCTTCAGTGTCATCCATGAAACTAGGGATAA...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | TTCTCACTTCTTTTCTGCTCCACCTTAATACTCCATCTAGCCACTGGTATGGAGAAAGCACAAAATAGGTaGACAAATCGGGAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFCSTLILHLATGMEKAQNR*TNREEG Trigger: ACCTTCCTCCCGATTTGTTCACCTATTTTGTGCTTT...CTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR TCA 90 bp | GGCCTTTTTCACATTACCAAGAACTCACAGCTACTCTGTGAATGCCCTAGATATGACACTGAAGCACAGTaGTTAATGAGTTGCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLFHITKNSQLLCECPRYDTEAQ*LMSCPT Trigger: TGTTGGGCAACTCATTAATCACTGTGCTTCAGTGTC...ATATCTAGGGCATTCACAGAGTAGCTGTGAGTTCTTGGTAATGTGAAAAAGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCACCTTAATACTCCATCTAGCCACTGGTATGGAGCATGTCATCAACTCATGCTGATAGACAACTaGAAGGATTATTCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHLNTPSSHWYGACHQLMLIDN*KDYSHC Trigger: ACAGTGTGAATAATCCTTTCAGTTGTCTATCAGCAT...GAGTTGATGACATGCTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR GCA 90 bp | GGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATAAAGGCACTACGTTCTCACTTCTTTTCTaGTCCACCTTAATACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNVKVKVGRTQTGHKGTTFSLLF*STLILH Trigger: ATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAA...CGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR GCA 90 bp | ATCGGGAGGAAGGTGGTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGATTCTTCTCACAAGCTaGTTCGAGATTTCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: IGRKVVTQEWERKSQSRQILLTS*FEISHT Trigger: AGTATGAGAAATCTCGAAGCAGCTTGTGAGAAGAAT...CTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668808.1 |
||
| CDS-3UTR CCA 90 bp | ATCGGGAGGAAGGTGGTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGAACTCATCAGGCTTATaGATGTATGGACTAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGRKVVTQEWERKSQSRQNSSGL*MYGLIA Trigger: AGCAATTAGTCCATACATCCATAAGCCTGATGAGTT...CTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCCATAAAGGCACTACGGCATGTTCATAAACACCATCAAGTAAAAGAAAGGACTCCATCTAGCCACTaGTATGGAGCATGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAIKALRHVHKHHQVKERTPSSH*YGACHQ Trigger: TTGATGACATGCTCCATACCAGTGGCTAGATGGAGT...CCTTTCTTTTACTTGATGGTGTTTATGAACATGCCGTAGTGCCTTTATGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR CCA 90 bp | TTCTCACTTCTTTTCTGCTCCACCTTAATACTCCATCTAGCCACTGGTATGGAGCCAAACTCACGTTTCTaGGTAAGTGAACACAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFCSTLILHLATGMEPNSRF*VSEHKI Trigger: GATCTTGTGTTCACTTACCCAGAAACGTGAGTTTGG...CTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR TCA 90 bp | CACCTTAATACTCCATCTAGCCACTGGTATGGAGCATGTCATCAACTCATTCTTAAAGCACAAAATAGGTaGACAAATCGGGAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLNTPSSHWYGACHQLILKAQNR*TNREEG Trigger: ACCTTCCTCCCGATTTGTTCACCTATTTTGTGCTTT...AAGAATGAGTTGATGACATGCTCCATACCAGTGGCTAGATGGAGTATTAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR TCA 90 bp | CTGGCCATAAAGGCACTACGGCATGTTCATAAACACCATCAAGTAAAAGAAAGGAAAGCACAAAATAGGTaGACAAATCGGGAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAIKALRHVHKHHQVKERKAQNR*TNREEG Trigger: ACCTTCCTCCCGATTTGTTCACCTATTTTGTGCTTT...CCTTTCTTTTACTTGATGGTGTTTATGAACATGCCGTAGTGCCTTTATGGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR GCA 90 bp | GTAACACAGGAATGGGAACGTAAAAGTCAAAGTAGGCAGGACTCAAACTGGCCATTCTCACTTCTTTTCTaGTCCACCTTAATACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTQEWERKSQSRQDSNWPFSLLF*STLILH Trigger: ATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAA...TGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR CCA 90 bp | CTGGCCATAAAGGCACTACGGCATGTTCATAAACACCATCAAGTAAAAGAAAGGTGGGTGGAACTTAACTaGCAACTGACTTTACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAIKALRHVHKHHQVKERWVELN*QLTLLR Trigger: TCTCAGTAAAGTCAGTTGCCAGTTAAGTTCCACCCA...CCTTTCTTTTACTTGATGGTGTTTATGAACATGCCGTAGTGCCTTTATGGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | AACTTCCAGAAAGTGGATTCTCTAAACAAGATCCCAAGTATTAGGAGCTATTTCCTCTGGAACTCGACCTaGACCTTGATCTTGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NFQKVDSLNKIPSIRSYFLWNST*TLILTL Trigger: CAAAGTCAAGATCAAGGTCCAGGTCGAGTTCCAGAG...GAAATAGCTCCTAATACTTGGGATCTTGTTTAGAGAATCCACTTTCTGGAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR GCA 90 bp | TTTCACATTACCAAGAACTCACAGCTACTCTGTGAATGCCCTAGATATTTGACTACCTATACAATGACCTaGTTACTGTGGCAGCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: FHITKNSQLLCECPRYLTTYTMT*LLWQLT Trigger: TGTTAGCTGCCACAGTAAGCAGGTCATTGTATAGGT...AGTCAAATATCTAGGGCATTCACAGAGTAGCTGTGAGTTCTTGGTAATGTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | CTACGGCATGTTCATAAACACCATCAAGTAAAAGAAAGGGGAATCAAGATGTTCGTGGTAACACAGGAATaGGAACGTAAAAGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRHVHKHHQVKERGIKMFVVTQE*ERKSQS Trigger: ACTTTGACTTTTACGTTCCCATTCCTGTGTTACCAC...GAACATCTTGATTCCCCTTTCTTTTACTTGATGGTGTTTATGAACATGCCGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000244020.5 ENST00000668808.1 ENST00000670741.1 |
||
| CDS-3UTR GCA 90 bp | GTTCATAAACACCATCAAGTAAAAGAAAGGGGAATCAAGATGTTCTCACTTCTTAAGACAGGAATGGCTTaGCAATGCAAACTCCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: VHKHHQVKERGIKMFSLLKTGMA*QCKLQF Trigger: GAATTGGAGTTTGCATTGGCAAGCCATTCCTGTCTT...AAGAAGTGAGAACATCTTGATTCCCCTTTCTTTTACTTGATGGTGTTTATGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | ATTTACCTATACAATGACCTGCTTACTGTGGCAGCTAACAATATAGTCAAACCAGTGGTAACACAGGAATaGGAACGTAAAAGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IYLYNDLLTVAANNIVKPVVTQE*ERKSQS Trigger: ACTTTGACTTTTACGTTCCCATTCCTGTGTTACCAC...TGGTTTGACTATATTGTTAGCTGCCACAGTAAGCAGGTCATTGTATAGGTAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | ACTCTCAACACTAATTATGCTGAGAACTTCCAGAAAGTGGATTCTCTAAACAAGGAATCTGGTCCTAAGTaGGCATATGCAATAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLNTNYAENFQKVDSLNKESGPK*AYAINS Trigger: TGAGTTTATTGCATATGCCCACTTAGGACCAGATTC...CTTGTTTAGAGAATCCACTTTCTGGAAGTTCTCAGCATAATTAGTGTTGAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CCA 90 bp | TTTCACATTACCAAGAACTCACAGCTACTCTGTGAATGCCCTAGATATTTGACTGTAGATTCCAAGGTATaGTCCAACCATGTATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FHITKNSQLLCECPRYLTVDSKV*SNHVYL Trigger: CAAATATACATGGTTGGACCATACCTTGGAATCTAC...AGTCAAATATCTAGGGCATTCACAGAGTAGCTGTGAGTTCTTGGTAATGTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR GCA 90 bp | TCAAACTGCAATTTCAACTCATCAGGCTTATGGATGTATGGACTAATTGCTAACCTAGAAAATTATGGGTaGAGGCATTTACCTATACAA | + |
|
Preference number: 4 (lower is better) Translates to: SNCNFNSSGLWMYGLIANLENYG*RHLPIQ Trigger: TTGTATAGGTAAATGCCTGCACCCATAATTTTCTAG...GTTAGCAATTAGTCCATACATCCATAAGCCTGATGAGTTGAAATTGCAGTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS CCA 90 bp | GTTCTCACTTCTTTTCTGCTCCACCTTAATACTCCATCTAGCCACTaGTATGGAGCATGTCATCAACTCATTCTTCTCACAAGCGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLTSFLLHLNTPSSH*YGACHQLILLTSGS Trigger: GCTCCCGCTTGTGAGAAGAATGAGTTGATGACATGCTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670741.1 |
||
| CDS CCA 90 bp | GTTCTCACTTCTTTTCTGCTCCACCTTAATACTCCATCTAGCCACTaGTATGGAGCATGTCATCAACTCATTCTTCTCACAAGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLTSFLLHLNTPSSH*YGACHQLILLTSCF Trigger: GAAGCAGCTTGTGAGAAGAATGAGTTGATGACATGCTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668808.1 |
||
| CDS-3UTR CAA 90 bp | GTTCATAAACACCATCAAGTAAAAGAAAGGGGAATCAAGATGTTCTCACTTCTTACACAGAACGGGCCTTaGAGGGTGGAACAGGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VHKHHQVKERGIKMFSLLTQNGP*RVEQVA Trigger: CGCTACCTGTTCCACCCTCAAAGGCCCGTTCTGTGT...AAGAAGTGAGAACATCTTGATTCCCCTTTCTTTTACTTGATGGTGTTTATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CAA 90 bp | TTTCACATTACCAAGAACTCACAGCTACTCTGTGAATGCCCTAGATATTTGACTAACTCGACCTGGACCTaGATCTTGACTTTGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FHITKNSQLLCECPRYLTNSTWT*ILTLSE Trigger: CTCGCTCAAAGTCAAGATCAAGGTCCAGGTCGAGTT...AGTCAAATATCTAGGGCATTCACAGAGTAGCTGTGAGTTCTTGGTAATGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CAA 90 bp | GCAGGACTCAAACTGGCCATAAAGGCACTACGGCATGTTCATAAACACCATCAAAACAAGAGAGCCCAGTaGAAGGATGTTTCATACTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLKLAIKALRHVHKHHQNKRAQ*KDVSYF Trigger: AAAGTATGAAACATCCTTCAACTGGGCTCTCTTGTT...TTGATGGTGTTTATGAACATGCCGTAGTGCCTTTATGGCCAGTTTGAGTCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CAA 90 bp | TTTCACATTACCAAGAACTCACAGCTACTCTGTGAATGCCCTAGATATTTGACTATCACAATCCAACCCTaGGTACCCTACATTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FHITKNSQLLCECPRYLTITIQP*VPYIVT Trigger: TGTCACAATGTAGGGTACCAAGGGTTGGATTGTGAT...AGTCAAATATCTAGGGCATTCACAGAGTAGCTGTGAGTTCTTGGTAATGTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CAA 90 bp | AACTTCCAGAAAGTGGATTCTCTAAACAAGATCCCAAGTATTAGGAGCTATTTCCAAGACAGGAATGGCTaGCCAATGCAAACTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: NFQKVDSLNKIPSIRSYFQDRNG*PMQTPI Trigger: AATTGGAGTTTGCATTGGCAAGCCATTCCTGTCTTG...GAAATAGCTCCTAATACTTGGGATCTTGTTTAGAGAATCCACTTTCTGGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS-3UTR CAA 90 bp | CTACGGCATGTTCATAAACACCATCAAGTAAAAGAAAGGGGAATCAAGATGTTCCTGACTGTTAATAAATaGGTCGTGGCTATTACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRHVHKHHQVKERGIKMFLTVNK*VVAITR Trigger: TCTAGTAATAGCCACGACCAATTTATTAACAGTCAG...GAACATCTTGATTCCCCTTTCTTTTACTTGATGGTGTTTATGAACATGCCGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244020.5 |
||
| CDS CCA 72 bp | GGGTGCAACTTATTTGCCTCCCAATCCTTTTGGCCTTaGGCTAGGGGACTTGCTCTGCTTTCAGCAGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: GCNLFASQSFWP*ARGLALLSAVM Trigger: CATTACTGCTGAAAGCAGAGCAAGTCCCCTAGCCCAAGGCCAAAAGGATTGGGAGGCAAATAAGTTGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662078.1 |
||
| CDS CAA 90 bp | CTGCTTTCAGCAGTAATGGGGGTTCTATCTGATGCCATCAAAGCTTaGCCTTCAGCAGCTCTTAATCTCCAAATTGGTTCCCTCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLSAVMGVLSDAIKA*PSAALNLQIGSLRE Trigger: CTCCCGGAGGGAACCAATTTGGAGATTAAGAGCTGCTGAAGGCAAAGCTTTGATGGCATCAGATAGAACCCCCATTACTGCTGAAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662078.1 |
||
| CDS CAA 72 bp | GCAGTAATGGGGGTTCTATCTGATGCCATCAAAGCTTaGCCTTCAGCAGCTCTTAATCTCCAAATTGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVMGVLSDAIKA*PSAALNLQIGS Trigger: GGAACCAATTTGGAGATTAAGAGCTGCTGAAGGCAAAGCTTTGATGGCATCAGATAGAACCCCCATTACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662078.1 |
||