Pregenerated sensors for SRSF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000112081Ensembl transcript IDs: ENST00000339436.11, ENST00000373715.11, ENST00000477442.6, ENST00000613941.4, ENST00000614136.1, ENST00000620242.1, ENST00000620389.1, ENST00000620941.1
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGAGAGAAAACAGCATGCTCGGGAACCAAAGGGCGGTGCAACCTaGCGACTGGCCAGCCTGGGTCATGTGAAACGACACCAGCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: AERKQHAREPKGGAT*RLASLGHVKRHQPS Trigger: GCTTGGCTGGTGTCGTTTCACATGACCCAGGCTGGCCAGTCGTCAGGTTGCACCGCCCTTTGGTTCCCGAGCATGCTGTTTTCTCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR CCA 90 bp | GATTGGCCAGGAATGTGTGGGCGGTCGAGGTGGCTGCTGCCGATTTaGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCTCGGG | + |
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Preference number: 1 (lower is better) Translates to: DWPGMCGRSRWLLPI*LRLERRLRENSMLG Trigger: CCCGAGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCACCTCGACCGCCCACACATTCCTGGCCAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR CCA 90 bp | AGAAATGTGAATCTTGCCATGTTGGGCAGACTGGTCTCCAACTCCTaGCTTCAAGAGATCCTCCCACCCGCCCTAGCCTCCCAAAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: RNVNLAMLGRLVSNS*LQEILPPALASQSA Trigger: AGCACTTTGGGAGGCTAGGGCGGGTGGGAGGATCTCTTGAAGCCAGGAGTTGGAGACCAGTCTGCCCAACATGGCAAGATTCACATTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR TCA 90 bp | ATAACCTGGATTTTCCATCCACATATGGGTTTGTGTGAAAGCCACTaGCAGCAGTCTAACAGGGTGGGAGTGTCATGGACGCTGACGGGA | + |
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Preference number: 1 (lower is better) Translates to: ITWIFHPHMGLCESH*QQSNRVGVSWTLTG Trigger: TCCCGTCAGCGTCCATGACACTCCCACCCTGTTAGACTGCTGTCAGTGGCTTTCACACAAACCCATATGTGGATGGAAAATCCAGGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR TCA 90 bp | TCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTaGGGCTGCCGGACTGACGGCCAGGAAGAATTTGCTGAAAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: SWRLVLGFNKLEMVR*GCRTDGQEEFAEKV Trigger: AACCTTTTCAGCAAATTCTTCCTGGCCGTCAGTCCGGCAGCCTCACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR TCA 90 bp | CCTCAAAATTACACAGGGTTAGGTCACCCTGAAAAACTAAGTCAATaGGCCTGGAGTCTGGCTGTATCTATTCTGAAATACCTCTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: PQNYTGLGHPEKLSQ*AWSLAVSILKYLFN Trigger: GTTGAAGAGGTATTTCAGAATAGATACAGCCAGACTCCAGGCTCATTGACTTAGTTTTTCAGGGTGACCTAACCCTGTGTAATTTTGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR TCA 90 bp | ACAAAATGCCCAATGCCAGAGCTCTCAGTAAATAAACAGGCTGTCTaGAAAGTGTCTTTCTTGAACATGCTTAACTTTAAGGCTGAACCT | + |
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Preference number: 1 (lower is better) Translates to: TKCPMPELSVNKQAV*KVSFLNMLNFKAEP Trigger: AGGTTCAGCCTTAAAGTTAAGCATGTTCAAGAAAGACACTTTTCAGACAGCCTGTTTATTTACTGAGAGCTCTGGCATTGGGCATTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR CAA 90 bp | GGAATGTGTGGGCGGTCGAGGTGGCTGCTGCCGATTTGGTTAAGGTaGGAGAGAAGGCTGAGAGAAAACAGCATGCTCGGGAACCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: GMCGRSRWLLPIWLR*ERRLRENSMLGNQR Trigger: CCTTTGGTTCCCGAGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCACCTCGACCGCCCACACATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR CCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCAGGGTGGGAGTGTCATaGACGCTGACGGGATCACGT | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLRVGVS*TLTGSR Trigger: ACGTGATCCCGTCAGCGTCCATGACACTCCCACCCT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR CCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCAGCCTCCCAAGTGGCTaGCATTATAGGCGCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLSLPSG*HYRRLP Trigger: TGGCAGGCGCCTATAATGCCAGCCACTTGGGAGGCT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCTGAATGGGGCGCGCTaGTCACATGACGCTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: WLLPIWLRLERRLRENSMLNGAR*SHDAER Trigger: CCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAG...CATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCGAGTGTCATGGACGCTaGCGGGATCACGTTTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLECHGR*RDHVCK Trigger: CTTACAAACGTGATCCCGTCAGCGTCCATGACACTC...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCGGGGTTTCACCATGTTaGCCAAGCTGGTCTCCAACT | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLGVSPC*PSWSPT Trigger: AGTTGGAGACCAGCTTGGTCAACATGGTGAAACCCC...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGAGGCTGCGACACCAGCCAAGCTaGATGGGGCGCGCTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: FLEISFGFQQARNGEVRLRHQPS*MGRAGH Trigger: GTGACCAGCGCGCCCCATTCAGCTTGGCTGGTGTCG...CAGCCTCACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCACATATGGGTTTGTGTaGAAGCCACTGACAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLTYGFV*KPLTAV Trigger: GACTGCTGTCAGTGGCTTTCACACAAACCCATATGT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCTTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTAAGGGCGGTGCAACCTaGCGACTGGCCAGCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: RSFSFLEISFGFQQARNGKGGAT*RLASLG Trigger: ACCCAGGCTGGCCAGTCGTCAGGTTGCACCGCCCTT...ACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAAGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCAGAAGCAACCCACAATaGACTGTGAACCAGAGATCA | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLRSNPQ*TVNQRS Trigger: TGATCTCTGGTTCACAGTTCATTGTGGGTTGCTTCT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCTCTTCAGGTACCCGATaGATCCCCCTAATAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLSSGTR*IPLIKQ Trigger: CTGTTTTATTAGGGGGATTCATCGGGTACCTGAAGA...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGAGGCTGTGTGGGCGGTCGAGGTaGCTGCTGCCGATTTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: FLEISFGFQQARNGEVRLCGRSR*LLPIWL Trigger: TAACCAAATCGGCAGCAGCCACCTCGACCGCCCACA...CAGCCTCACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCTTTTACACTCAACCCTaGATATGGACAAGACCGGTT | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLFYTQP*IWTRPV Trigger: AACCGGTCTTGTCCATATTCAGGGTTGAGTGTAAAA...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR GCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCAATCGTGTAACCAACTaGTTCCCATGGGATAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLNRVTN*FPWDKN Trigger: GTTCTTATCCCATGGGAAGCAGTTGGTTACACGATT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR GCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCTCCAACTTAAGAGCCTaGAAGGAAGTCATATACTGC | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLSNLRA*KEVIYC Trigger: GCAGTATATGACTTCCTTGCAGGCTCTTAAGTTGGA...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR GCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCGACACAGGGTACCTGTaGTTGGTAAAACTACAACTT | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLDTGYL*LVKLQL Trigger: AAGTTGTAGTTTTACCAAGCACAGGTACCCTGTGTC...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR CCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCAAAGTAACTGCCAACTaGGACTGTATGTCACCTAAG | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLKVTAN*DCMSPK Trigger: CTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCCAAGACCGGTTAGTGTaGCCTGTTATTTTAGGAATT | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLQDRLV*PVILGI Trigger: AATTCCTAAAATAACAGGTCACACTAACCGGTCTTG...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCACCCACAATGAACTGTaGACCAGAGATCAAACTAAA | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLTHNEL*TRDQTK Trigger: TTTAGTTTGATCTCTGGTTCACAGTTCATTGTGGGT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCTTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTCCAGCCTGGGTCATGTaGAACGACACCAGCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RSFSFLEISFGFQQARNGPAWVM*NDTSQA Trigger: AGCTTGGCTGGTGTCGTTTCACATGACCCAGGCTGG...ACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAAGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGAGGCTGGGTTGGAGAGAAGGCTaGGAGAAAACAGCATGCTCG | + |
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Preference number: 2 (lower is better) Translates to: FLEISFGFQQARNGEVRLGWREG*EKTACS Trigger: CGAGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACC...CAGCCTCACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGAACCAACTGCTTCCCATaGGATAAGAACAATGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: GLLVKVTANWDCMSPKSGTNCFP*DKNNGN Trigger: GTTACCATTGTTCTTATCCCATGGGAAGCAGTTGGT...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR CCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCTTTTCCATCCACATATaGGTTTGTGTGAAAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLFSIHI*VCVKAT Trigger: AGTGGCTTTCACACAAACCCATATGTGGATGGAAAA...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCCTTTTAATAGAAATGTaGATCTTGCCATGTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ETKFCFHSGWSEVATSRLLLIEM*ILPCWA Trigger: TGCCCAACATGGCAAGATTCACATTTCTATTAAAAG...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGTTGGATTTAGTTGGTTaGCGAAGGGGGTGTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FSFLEISFGFQQARNGEVLDLVG*RRGCCG Trigger: TCCACAACACCCCCTTCGCCAACCAACTAAATCCAA...CACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTTGCGTTGGATTTAGTTaGTTGGCGAAGGGGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: RSFSFLEISFGFQQARNGCVGFS*LAKGVL Trigger: CAACACCCCCTTCGCCAACCAACTAAATCCAACGCA...ACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAAGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTTGCTGAAAAGGTTTTaGCAGATGTTGCGTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: ASPSWRLVLGFNKLEMVRLLKRF*QMLRWI Trigger: AATCCAACGCAACATCTGGCAAAACCTTTTCAGCAA...CCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCAACAGTGGGTTCAACTaGCTATACACAATTATGCTA | + |
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Preference number: 2 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLNSGFN*LYTIML Trigger: TAGCATAATTGTGTATAGTCAGTTGAACCCACTGTT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR TCA 72 bp | GCGGTGCAACCTGACGACTGGCCAGCCTGGGTCATGTaGAACGACACCAGCCAAGCTGAATGGGGCGCGCTG | + |
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Preference number: 3 (lower is better) Translates to: AVQPDDWPAWVM*NDTSQAEWGAL Trigger: CAGCGCGCCCCATTCAGCTTGGCTGGTGTCGTTTCACATGACCCAGGCTGGCCAGTCGTCAGGTTGCACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR TCA 72 bp | GCCAGCCTGGGTCATGTGAAACGACACCAGCCAAGCTaGATGGGGCGCGCTGGTCACATGACGCTGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: ASLGHVKRHQPS*MGRAGHMTLKG Trigger: CCCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAGCTTGGCTGGTGTCGTTTCACATGACCCAGGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR TCA 72 bp | AAACAGCATGCTCGGGAACCAAAGGGCGGTGCAACCTaGCGACTGGCCAGCCTGGGTCATGTGAAACGACAC | + |
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Preference number: 3 (lower is better) Translates to: KQHAREPKGGAT*RLASLGHVKRH Trigger: GTGTCGTTTCACATGACCCAGGCTGGCCAGTCGTCAGGTTGCACCGCCCTTTGGTTCCCGAGCATGCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR GCA 72 bp | TGGCAACCTCCACCCACCAGGTTTAAGCACTTCTCCTaGCTCAGCCTCCCAAGTGGCTGGCATTATAGGCGC | + |
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Preference number: 3 (lower is better) Translates to: WQPPPTRFKHFS*LSLPSGWHYRR Trigger: GCGCCTATAATGCCAGCCACTTGGGAGGCTGAGGCAGGAGAAGTGCTTAAACCTGGTGGGTGGAGGTTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR CCA 72 bp | ACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCATaGCAACCTCCACCCACCAGGTTTAAGCACTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: TQAGVKWLHLGS*QPPPTRFKHFS Trigger: GGAGAAGTGCTTAAACCTGGTGGGTGGAGGTTGCCATGAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR CCA 72 bp | GGAATGTGTGGGCGGTCGAGGTGGCTGCTGCCGATTTaGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGC | + |
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Preference number: 3 (lower is better) Translates to: GMCGRSRWLLPI*LRLERRLRENS Trigger: GCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCACCTCGACCGCCCACACATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR TCA 72 bp | TTTGGAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTaGAGTGGCTACATCTCGGCTCATGGCAACCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: FGDEVLLSLRLE*SGYISAHGNLH Trigger: GTGGAGGTTGCCATGAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR CAA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCCTTAGCTATCTTGGCTaGTTCCTAACAGGAACAGGT | + |
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Preference number: 3 (lower is better) Translates to: ETKFCFHSGWSEVATSRLLSYLG*FLTGTG Trigger: ACCTGTTCCTGTTAGGAACAAGCCAAGATAGCTAAG...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR-3UTR CAA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCCTTCTAGTGAACACCTaGATCCTTAAACCACAGGTC | + |
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Preference number: 3 (lower is better) Translates to: ETKFCFHSGWSEVATSRLLLVNT*ILKPQV Trigger: GACCTGTGGTTTAAGGATCAAGGTGTTCACTAGAAG...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR TCA 72 bp | ATTTTCCATCCACATATGGGTTTGTGTGAAAGCCACTaGCAGCAGTCTAACAGGGTGGGAGTGTCATGGACG | + |
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Preference number: 3 (lower is better) Translates to: IFHPHMGLCESH*QQSNRVGVSWT Trigger: CGTCCATGACACTCCCACCCTGTTAGACTGCTGTCAGTGGCTTTCACACAAACCCATATGTGGATGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| 3UTR TCA 72 bp | TTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTaGGGCTGCCGGACTGACGGCCAGGAAGAATTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LVLGFNKLEMVR*GCRTDGQEEFA Trigger: AGCAAATTCTTCCTGGCCGTCAGTCCGGCAGCCTCACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGGTGGCTGCTGCCGATTaGGTTAAGGTTGGAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: FSFLEISFGFQQARNGEVVAAAD*VKVGEK Trigger: CTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCAC...CACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| 3UTR GCA 72 bp | TGTCCTTTTTACAGAAACCCTTCCAACTTAAGAGCCTaGAAGGAAGTCATATACTGCCCAAAAATGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: CPFYRNPSNLRA*KEVIYCPKMPT Trigger: TGTGGGCATTTTTGGGCAGTATATGACTTCCTTGCAGGCTCTTAAGTTGGAAGGGTTTCTGTAAAAAGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGATTTTTCCTGCTTTTTaGTTAGCCGAAGGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FSFLEISFGFQQARNGEVIFPAF*LAEGCC Trigger: GCAGCAGCCTTCGGCTAACAAAAAAGCAGGAAAAAT...CACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCAATGGGCAACTTACTTaGTGTTTAAGAACCAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLNGQLT*CLRTRL Trigger: CAACCTGGTTCTTAAACACAAAGTAAGTTGCCCATT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | ACGACACCAGCCAAGCTGAATGGGGCGCGCTGGTCACATGACGCTGAAAGGGCTCGACACCAGCCAAGCTaGATGGGGCGCGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTPAKLNGARWSHDAERARHQPS*MGRAGH Trigger: GTGACCAGCGCGCCCCATTCAGCTTGGCTGGTGTCG...AGCCCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAGCTTGGCTGGTGTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | ACGACACCAGCCAAGCTGAATGGGGCGCGCTGGTCACATGACGCTGAAAGGGCTAAGGGCGGTGCAACCTaGCGACTGGCCAGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTPAKLNGARWSHDAERAKGGAT*RLASLG Trigger: ACCCAGGCTGGCCAGTCGTCAGGTTGCACCGCCCTT...AGCCCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAGCTTGGCTGGTGTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCATGCTCGGGAACCAAAGGGCGGTGCAACCTGACGACTGGCCAGCCTTTGGCCAGGAATGTGTaGGCGGTCGAGGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTACSGTKGRCNLTTGQPLARNV*AVEVAA Trigger: AGCAGCCACCTCGACCGCCCACACATTCCTGGCCAA...AGGCTGGCCAGTCGTCAGGTTGCACCGCCCTTTGGTTCCCGAGCATGCTGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | ACGACACCAGCCAAGCTGAATGGGGCGCGCTGGTCACATGACGCTGAAAGGGCTGCTGAAAGGGCTAGTTaGCTGGCTAATGCAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTPAKLNGARWSHDAERAAERAS*LANADS Trigger: TGAATCTGCATTAGCCAGTCAACTAGCCCTTTCAGC...AGCCCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAGCTTGGCTGGTGTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | TGGCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCTAGAAATGGTGAGGTaGGGCTGCCGGACTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLLPIWLRLERRLRENSMLEMVR*GCRTDG Trigger: GCCGTCAGTCCGGCAGCCTCACCTCACCATTTCTAG...CATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| 3UTR CAA 72 bp | AGGAATGTGTGGGCGGTCGAGGTGGCTGCTGCCGATTaGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RNVWAVEVAAAD*VKVGEKAERKQ Trigger: CTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCACCTCGACCGCCCACACATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTTTGCCAGATGTTGCGTTGGATTTAGTTGGTTGGCGAAGGGGGTGTTGGTGAGGCTGCCGGACTaGCGGCCAGGAAGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGFARCCVGFSWLAKGVLVRLPD*RPGRIC Trigger: GCAAATTCTTCCTGGCCGTCAGTCCGGCAGCCTCAC...CAACACCCCCTTCGCCAACCAACTAAATCCAACGCAACATCTGGCAAAACCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCTCACTCAGGCTGGAGTaGAGTGGCTACATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETKFCFHSGWSEVATSRLSLRLE*SGYISA Trigger: AGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGA...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR GCA 90 bp | ACGACACCAGCCAAGCTGAATGGGGCGCGCTGGTCACATGACGCTGAAAGGGCTGGTTTTGCCAGATGTTaGGTTGGATTTAGTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTPAKLNGARWSHDAERAGFARC*VGFSWL Trigger: CAACCAACTAAATCCAACGCAACATCTGGCAAAACC...AGCCCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAGCTTGGCTGGTGTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR CCA 90 bp | CCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCTCGGGAACCTGAATGGGGCGCGCTaGTCACATGACGCTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIWLRLERRLRENSMLGNLNGAR*SHDAER Trigger: CCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAG...GTTCCCGAGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCTTGTGGGCGGTCGAGGTaGCTGCTGCCGATTTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AAADLVKVGEKAERKQHACGRSR*LLPIWL Trigger: TAACCAAATCGGCAGCAGCCACCTCGACCGCCCACA...AGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGAAGCCTCCCAAGTGGCTaGCATTATAGGCGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGSLPSG*HYRRLP Trigger: TGGCAGGCGCCTATAATGCCAGCCACTTGGGAGGCT...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGACTACATCTCGGCTCATaGCAACCTCCACCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGLHLGS*QPPPTR Trigger: CCTGGTGGGTGGAGGTTGCCATGAGCCGAGATGTAG...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR GCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCTTTAAGCACTTCTCCTaGCTCAGCCTCCCAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETKFCFHSGWSEVATSRLFKHFS*LSLPSG Trigger: GCCACTTGGGAGGCTGAGGCAGGAGAAGTGCTTAAA...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGAGAGTGTCATGGACGCTaGCGGGATCACGTTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGECHGR*RDHVCK Trigger: CTTACAAACGTGATCCCGTCAGCGTCCATGACACTC...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGAGGGGTTTCACCATGTTaGCCAAGCTGGTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGGVSPC*PSWSPT Trigger: AGTTGGAGACCAGCTTGGTCAACATGGTGAAACCCC...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTTTGCCAGATGTTGCGTTGGATTTAGTTGGTTGGCGAAGGGGGTGTTGGGTTGGAGAGAAGGCTaGGAGAAAACAGCATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGFARCCVGFSWLAKGVLGWREG*EKTACS Trigger: CGAGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACC...CAACACCCCCTTCGCCAACCAACTAAATCCAACGCAACATCTGGCAAAACCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCTTGCGTTGGATTTAGTTaGTTGGCGAAGGGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAADLVKVGEKAERKQHACVGFS*LAKGVL Trigger: CAACACCCCCTTCGCCAACCAACTAAATCCAACGCA...AGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCGAAAAACTAAGTCAATaGGCCTGGAGTCTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETKFCFHSGWSEVATSRLEKLSQ*AWSLAV Trigger: TACAGCCAGACTCCAGGCTCATTGACTTAGTTTTTC...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCTTTAGCCGAAGGCTGCTaGTGTAGTTGTTGTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AAADLVKVGEKAERKQHALAEGC*CSCCED Trigger: GTCTTCACAACAACTACAGCAGCAGCCTTCGGCTAA...AGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR GCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCTTGGAGACGAAGTTTTaGTTTCACTCAGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETKFCFHSGWSEVATSRLLETKF*FHSGWS Trigger: ACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTCCAA...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGATGCTTTCACTCAGGCTaGAGTGAAGTGGCTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGCFHSG*SEVATS Trigger: AGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCA...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCTTTGTTAGCCGAAGGCTaGTGCTGTAGTTGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAADLVKVGEKAERKQHALLAEG*CCSCCE Trigger: TTCACAACAACTACAGCAGCAGCCTTCGGCTAACAA...AGCATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR GCA 90 bp | TTGGAGAGAAGGCTGAGAGAAAACAGCATGCTCGGGAACCAAAGGGCGGTGCAATTGCTGAAAAGGTTTTaGCAGATGTTGCGTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LERRLRENSMLGNQRAVQLLKRF*QMLRWI Trigger: AATCCAACGCAACATCTGGCAAAACCTTTTCAGCAA...TTGCACCGCCCTTTGGTTCCCGAGCATGCTGTTTTCTCTCAGCCTTCTCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR CCA 90 bp | TGGCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGAAAGGGCTAGTTGACTaGCTAATGCAGATTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLPIWLRLERRLRENSMKGLVD*LMQIQR Trigger: CCTCTGAATCTGCATTAGCCAGTCAACTAGCCCTTT...CATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGATTTCTGCTTAAGACATaGAGGTCAGAAGCAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGFLLKT*RSEATH Trigger: GTGGGTTGCTTCTGACCTCCATGTCTTAAGCAGAAA...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | TGGCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGCCAGGAAGAATTTGCTaGAAAGGTTTTGCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: WLLPIWLRLERRLRENSMPGRIC*KGFARC Trigger: ACATCTGGCAAAACCTTTTCAGCAAATTCTTCCTGG...CATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCAGGATAACTCCCTGGTaGAGTTACTTTTATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETKFCFHSGWSEVATSRLRITPW*SYFYFR Trigger: CCTGAAATAAAAGTAACTTCACCAGGGAGTTATCCT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCAATAAACAGGCTGTCTaGAAAGTGTCTTTCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ETKFCFHSGWSEVATSRLNKQAV*KVSFLN Trigger: GTTCAAGAAAGACACTTTTCAGACAGCCTGTTTATT...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGACAAGACCGGTTAGTGTaGCCTGTTATTTTAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGQDRLV*PVILGI Trigger: AATTCCTAAAATAACAGGTCACACTAACCGGTCTTG...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCACTCCTGACCACAAGTaGTCCACCTGCCTCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLTPDHK*STCLNL Trigger: GAGGTTGAGGCAGGTGGATCACTTGTGGTCAGGAGT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR CCA 90 bp | TTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGAGGCTGTGGCTGCTGCCGATTTaGTTAAGGTTGGAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLEISFGFQQARNGEVRLWLLPI*LRLERR Trigger: CCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCA...CAGCCTCACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGAGGCTGAATAAACAGCTGAGCTaGTTGGCCAGGAATGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLEISFGFQQARNGEVRLNKQLS*LARNVW Trigger: CCACACATTCCTGGCCAATCAGCTCAGCTGTTTATT...CAGCCTCACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGAAACAGTGGGTTCAACTaGCTATACACAATTATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGNSGFN*LYTIML Trigger: TAGCATAATTGTGTATAGTCAGTTGAACCCACTGTT...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGACAACAAGGGGAAAGTTaGATGGACAAAACTAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLVKVTANWDCMSPKSGQQGES*MDKTNQ Trigger: TTGATTAGTTTTGTCCATGCAACTTTCCCCTTGTTG...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR CCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCCTGGTCTCCAACTCCTaGCTTCAAGAGATCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLLVSNS*LQEILP Trigger: TGGGAGGATCTCTTGAAGCCAGGAGTTGGAGACCAG...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCTTGTGTGAAAGCCACTaGCAGCAGTCTAACAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLLCESH*QQSNRV Trigger: CACCCTGTTAGACTGCTGTCAGTGGCTTTCACACAA...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| 3UTR CAA 72 bp | AGCCATCACACCCAGCCAAAACAAATTTCAATGACCTaGTCTCAGAACCTTAAGGGGTCTACAGCTGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SHHTQPKQISMT*SQNLKGSTAEL Trigger: TAATTCAGCTGTAGACCCCTTAAGGTTCTGAGACAAGGTCATTGAAATTTGTTTTGGCTGGGTGTGATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCAAGGCTGAACCTTCCTaGCACCAATTCTCCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLKAEPS*HQFSQD Trigger: ATCTTGGGAGAATTGGTGTCAGGAAGGTTCAGCCTT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCACATATGGGTTTGTGTaGAAGCCACTGACAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLTYGFV*KPLTAV Trigger: GACTGCTGTCAGTGGCTTTCACACAAACCCATATGT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCAGAAGCAACCCACAATaGACTGTGAACCAGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLRSNPQ*TVNQRS Trigger: TGATCTCTGGTTCACAGTTCATTGTGGGTTGCTTCT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCAGGGTTAGGTCACCCTaGAAAACTAAGTCAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLRVRSP*KTKSMS Trigger: GCTCATTGACTTAGTTTTTCAGGGTGACCTAACCCT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCTTTTACACTCAACCCTaGATATGGACAAGACCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLFYTQP*IWTRPV Trigger: AACCGGTCTTGTCCATATTCAGGGTTGAGTGTAAAA...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
||
| CDS-3UTR GCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCAATCGTGTAACCAACTaGTTCCCATGGGATAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLNRVTN*FPWDKN Trigger: GTTCTTATCCCATGGGAAGCAGTTGGTTACACGATT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR GCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCGACACAGGGTACCTGTaGTTGGTAAAACTACAACTT | + |
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Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLDTGYL*LVKLQL Trigger: AAGTTGTAGTTTTACCAAGCACAGGTACCCTGTGTC...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR TCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCACCCACAATGAACTGTaGACCAGAGATCAAACTAAA | + |
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Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLTHNEL*TRDQTK Trigger: TTTAGTTTGATCTCTGGTTCACAGTTCATTGTGGGT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR GCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCATACTAAAGACAAAATaGCCAATGCCAGAGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLILKTK*PMPELS Trigger: TGAGAGCTCTGGCATTGGGCATTTTGTCTTTAGTAT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR CCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCTTTTCCATCCACATATaGGTTTGTGTGAAAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLFSIHI*VCVKAT Trigger: AGTGGCTTTCACACAAACCCATATGTGGATGGAAAA...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR CCA 90 bp | AGAAGCTTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAAGCTTCTCCTTCTTaGAGATTAGTTTTGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RSFSFLEISFGFQQARNGEASPS*RLVLGF Trigger: GAAACCCAAAACTAATCTCCAAGAAGGAGAAGCTTC...ACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAAGCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS-3UTR GCA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCTATACTGCCCAAAAATaGCCACATAAGTTGTCCATT | + |
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Preference number: 4 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLYTAQK*PHKLSI Trigger: AATGGACAACTTATGTGGGCATTTTTGGGCAGTATA...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR CAA 90 bp | ACGACACCAGCCAAGCTGAATGGGGCGCGCTGGTCACATGACGCTGAAAGGGCTATTTTTCCTGCTTTTTaGTTAGCCGAAGGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TTPAKLNGARWSHDAERAIFPAF*LAEGCC Trigger: GCAGCAGCCTTCGGCTAACAAAAAAGCAGGAAAAAT...AGCCCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAGCTTGGCTGGTGTCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS-3UTR CAA 90 bp | TTGGAGAGAAGGCTGAGAGAAAACAGCATGCTCGGGAACCAAAGGGCGGTGCAAGTGGCTGCTGCCGATTaGGTTAAGGTTGGAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LERRLRENSMLGNQRAVQVAAAD*VKVGEK Trigger: CTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCAC...TTGCACCGCCCTTTGGTTCCCGAGCATGCTGTTTTCTCTCAGCCTTCTCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS TCA 90 bp | AAGCTGAATGGGGCGCGCTGGTCACATGACGCTGAAAGGGCTAGTTaGCTGGCTAATGCAGATTCAGAGGGTGGTGAGAAGAGACATGAT | + |
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Preference number: 5 (lower is better) Translates to: KLNGARWSHDAERAS*LANADSEGGEKRHD Trigger: ATCATGTCTCTTCTCACCACCCTCTGAATCTGCATTAGCCAGTCAACTAGCCCTTTCAGCGTCATGTGACCAGCGCGCCCCATTCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339436.11 ENST00000477442.6 ENST00000620389.1 |
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| CDS GCA 90 bp | CCCCTTTGTGGTTCCCAACTCCCAGGTAACCCCCATCCTGGCTCATaGCCCAATGAGGAATATAAAGACTTCCACTCCAAGACTAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PLCGSQLPGNPHPGS*PNEEYKDFHSKTRK Trigger: TTTCCTAGTCTTGGAGTGGAAGTCTTTATATTCCTCATTGGGGCATGAGCCAGGATGGGGGTTACCTGGGAGTTGGGAACCACAAAGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000620941.1 |
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| CDS-3UTR CAA 90 bp | AAAGGTTTTGCCAGATGTTGCGTTGGATTTAGTTGGTTGGCGAAGGGGGTGTTGCCGATTTGGTTAAGGTaGGAGAGAAGGCTGAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: KGFARCCVGFSWLAKGVLPIWLR*ERRLRE Trigger: TTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGG...CAACACCCCCTTCGCCAACCAACTAAATCCAACGCAACATCTGGCAAAACCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS-3UTR CAA 90 bp | GAGACGAAGTTTTGCTTTCACTCAGGCTGGAGTGAAGTGGCTACATCTCGGCTCCAAATTTCAATGACCTaGTCTCAGAACCTTAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: ETKFCFHSGWSEVATSRLQISMT*SQNLKG Trigger: CCCCTTAAGGTTCTGAGACAAGGTCATTGAAATTTG...GAGCCGAGATGTAGCCACTTCACTCCAGCCTGAGTGAAAGCAAAACTTCGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR CAA 90 bp | GGGCTCCTGGTTAAAGTAACTGCCAACTGGGACTGTATGTCACCTAAGTCAGGAAATGGGCAACTTACTTaGTGTTTAAGAACCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: GLLVKVTANWDCMSPKSGNGQLT*CLRTRL Trigger: CAACCTGGTTCTTAAACACAAAGTAAGTTGCCCATT...TCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR CAA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCCGGGGTTTCACCATGTaGACCAAGCTGGTCTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLRGFTM*TKLVSN Trigger: GTTGGAGACCAGCTTGGTCAACATGGTGAAACCCCG...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR CAA 90 bp | TGGCTGCTGCCGATTTGGTTAAGGTTGGAGAGAAGGCTGAGAGAAAACAGCATGAGAAGCTTCTCCTTCTaGGAGATTAGTTTTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: WLLPIWLRLERRLRENSMRSFSF*EISFGF Trigger: AAACCCAAAACTAATCTCCAAGAAGGAGAAGCTTCT...CATGCTGTTTTCTCTCAGCCTTCTCTCCAACCTTAACCAAATCGGCAGCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS-3UTR CAA 90 bp | AGAAGCTTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGTTGGATTTAGTTGGTaGGCGAAGGGGGTGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: RSFSFLEISFGFQQARNGVGFSW*AKGVLW Trigger: CCACAACACCCCCTTCGCCAACCAACTAAATCCAAC...ACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAAGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS TCA 90 bp | CCTGTAAGAGGTAAATTTAGTCCTATAGAAACTATTTTGGAGGTCTaGGGAGATGTGGAGTTAGCACCCAGACAATACTGCCTGGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: PVRGKFSPIETILEV*GDVELAPRQYCLVQ Trigger: TTGGACCAGGCAGTATTGTCTGGGTGCTAACTCCACATCTCCTCAGACCTCCAAAATAGTTTCTATAGGACTAAATTTACCTCTTACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620389.1 |
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| CDS-3UTR CAA 90 bp | TTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTGTTGCCAGATGTTGCGTaGGATTTAGTTGGTTGGCGA | + |
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Preference number: 5 (lower is better) Translates to: FSFLEISFGFQQARNGEVLPDVA*DLVGWR Trigger: TCGCCAACCAACTAAATCCAACGCAACATCTGGCAA...CACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTTTTGCCAGATGTTGCGTTGGATTTAGTTGGTTGGCGAAGGGGGTGTTGTCTTGGAGATTAGTTTaGGGTTTCAACAAGCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: KGFARCCVGFSWLAKGVLSWRLV*GFNKLE Trigger: TTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGA...CAACACCCCCTTCGCCAACCAACTAAATCCAACGCAACATCTGGCAAAACCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS-3UTR CAA 90 bp | AGAAGCTTCTCCTTCTTGGAGATTAGTTTTGGGTTTCAACAAGCTAGAAATGGTTTGGCGAAGGGGGTGTaGTGGATTTTTCCTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: RSFSFLEISFGFQQARNGLAKGV*WIFPAF Trigger: AAAAGCAGGAAAAATCCACAACACCCCCTTCGCCAA...ACCATTTCTAGCTTGTTGAAACCCAAAACTAATCTCCAAGAAGGAGAAGCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000477442.6 |
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| CDS-3UTR CAA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCACAGGGTACCTGTGCTaGGTAAAACTACAACTTCCC | + |
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Preference number: 5 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLTGYLC*VKLQLP Trigger: GGGAAGTTGTAGTTTTACCAAGCACAGGTACCCTGT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS-3UTR CAA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCCTTAGCTATCTTGGCTaGTTCCTAACAGGAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLLSYLG*FLTGTG Trigger: ACCTGTTCCTGTTAGGAACAAGCCAAGATAGCTAAG...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS GCA 90 bp | AGTGAAAAGCAGGTATTCCAACCATGGATTCACTTTAACAAAGAATaGTTCACAGCAGATCTGTCCAATGCAAAACTTCATGTCAAACTA | + |
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Preference number: 5 (lower is better) Translates to: SEKQVFQPWIHFNKE*FTADLSNAKLHVKL Trigger: TAGTTTGACATGAAGTTTTGCATTGGACAGATCTGCTGTGAAGCATTCTTTGTTAAAGTGAATCCATGGTTGGAATACCTGCTTTTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000614136.1 ENST00000620389.1 |
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| CDS-3UTR CAA 90 bp | ATTGTGAACTTTTACATCATGATGGATCAGCTTAGAATTCCCATGCAACACCTCAATGTAATTGACATATaGCATGGCTTCCGTAACTTC | + |
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Preference number: 5 (lower is better) Translates to: IVNFYIMMDQLRIPMQHLNVIDI*HGFRNF Trigger: GAAGTTACGGAAGCCATGCAATATGTCAATTACATT...GAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373715.11 |
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| CDS TCA 72 bp | GGGGCGCGCTGGTCACATGACGCTGAAAGGGCTAGTTaGCTGGCTAATGCAGATTCAGAGGGTGGTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: GARWSHDAERAS*LANADSEGGEK Trigger: CTTCTCACCACCCTCTGAATCTGCATTAGCCAGTCAACTAGCCCTTTCAGCGTCATGTGACCAGCGCGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339436.11 ENST00000477442.6 ENST00000620389.1 |
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| CDS CCA 72 bp | CGCGCTGGTCACATGACGCTGAAAGGGCTAGTTGACTaGCTAATGCAGATTCAGAGGGTGGTGAGAAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: RAGHMTLKGLVD*LMQIQRVVRRD Trigger: GTCTCTTCTCACCACCCTCTGAATCTGCATTAGCCAGTCAACTAGCCCTTTCAGCGTCATGTGACCAGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339436.11 ENST00000477442.6 ENST00000620389.1 |
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| CDS GCA 72 bp | GTAGGCAGAGGTTACAACGAGCCAAGATCACACCATTaGACTCCAGCCTTCCATCTAGCTCTCGGACTGCAT | + |
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Preference number: 6 (lower is better) Translates to: VGRGYNEPRSHH*TPAFHLALGLH Trigger: ATGCAGTCCGAGAGCTAGATGGAAGGCTGGAGTGCAATGGTGTGATCTTGGCTCGTTGTAACCTCTGCCTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613941.4 |
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| CDS GCA 72 bp | GGTTCCCAACTCCCAGGTAACCCCCATCCTGGCTCATaGCCCAATGAGGAATATAAAGACTTCCACTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GSQLPGNPHPGS*PNEEYKDFHSK Trigger: CTTGGAGTGGAAGTCTTTATATTCCTCATTGGGGCATGAGCCAGGATGGGGGTTACCTGGGAGTTGGGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000620941.1 |
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| CDS CAA 72 bp | TGGCGTGAGGCATTTCCCAACTTTTCAATCTCACTGTaGGGCCCAGTGAATGTGCCGAAGAACTGGCACCCA | + |
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Preference number: 6 (lower is better) Translates to: WREAFPNFSISL*GPVNVPKNWHP Trigger: TGGGTGCCAGTTCTTCGGCACATTCACTGGGCCCAACAGTGAGATTGAAAAGTTGGGAAATGCCTCACGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000614136.1 ENST00000620389.1 |
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| CDS TCA 72 bp | CTAGTTTTGGGTTTCAACAAGCTAGAAATGGTGAGGTaGGGCTGCCGGACTGACGGCCAGGAAGAATTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LVLGFNKLEMVR*GCRTDGQEEFA Trigger: AGCAAATTCTTCCTGGCCGTCAGTCCGGCAGCCTCACCTCACCATTTCTAGCTTGTTGAAACCCAAAACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339436.11 ENST00000620389.1 |
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| CDS TCA 72 bp | CATTTCCCAACTTTTCAATCTCACTGTTGGGCCCAGTaGATGTGCCGAAGAACTGGCACCCATCGTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: HFPTFQSHCWAQ*MCRRTGTHRPK Trigger: TTTTGGACGATGGGTGCCAGTTCTTCGGCACATTCACTGGGCCCAACAGTGAGATTGAAAAGTTGGGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000614136.1 ENST00000620389.1 |
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| CDS TCA 72 bp | GGTAAATTTAGTCCTATAGAAACTATTTTGGAGGTCTaGGGAGATGTGGAGTTAGCACCCAGACAATACTGC | + |
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Preference number: 6 (lower is better) Translates to: GKFSPIETILEV*GDVELAPRQYC Trigger: GCAGTATTGTCTGGGTGCTAACTCCACATCTCCTCAGACCTCCAAAATAGTTTCTATAGGACTAAATTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620389.1 |
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| CDS TCA 72 bp | AAGATCCCAATTGTATCTAAAGATACAATTGGCCAGTaGTTGGGAAAGCCATCTAAGAGCCACATATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: KIPIVSKDTIGQ*LGKPSKSHISC Trigger: ACAGGATATGTGGCTCTTAGATGGCTTTCCCAATCACTGGCCAATTGTATCTTTAGATACAATTGGGATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620242.1 |
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| CDS CCA 72 bp | TCCCAATTGTATCTAAAGATACAATTGGCCAGTGATTaGGAAAGCCATCTAAGAGCCACATATCCTGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: SQLYLKIQLASD*ESHLRATYPVD Trigger: ATCTACAGGATATGTGGCTCTTAGATGGCTTTCCCAATCACTGGCCAATTGTATCTTTAGATACAATTGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620242.1 |
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| CDS TCA 72 bp | TTGATGCCATTAAGTGCTACATTAGAACTGCATTTGTaGTCGTCACATTTAAGAGTGTGTTTAGGCTTACCA | + |
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Preference number: 6 (lower is better) Translates to: LMPLSATLELHL*SSHLRVCLGLP Trigger: TGGTAAGCCTAAACACACTCTTAAATGTGACGATCACAAATGCAGTTCTAATGTAGCACTTAATGGCATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339436.11 ENST00000614136.1 ENST00000620389.1 |
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