Pregenerated sensors for SRSF11 (Homo sapiens)
Ensembl gene IDs: ENSG00000116754Ensembl transcript IDs: ENST00000370949.1, ENST00000370950.7, ENST00000370951.5, ENST00000460795.5, ENST00000461935.1, ENST00000463116.1, ENST00000463859.5, ENST00000469170.5, ENST00000473950.5, ENST00000475204.5, ENST00000484162.5, ENST00000489188.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAATACACAACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTaGTTATCTGTTAAAAGGCTTGTGTCCCAGTGCAACACTACCTTT | + |
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Preference number: 1 (lower is better) Translates to: KYTTELGVEAVFDFN*LSVKRLVSQCNTTF Trigger: AAAGGTAGTGTTGCACTGGGACACAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGTTGTGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR-3UTR CCA 90 bp | CGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTGGAACAGCGCCAATCTaGGTAAGTGGGTTAGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: RFLSHEPNVSKHSRFSRGGTAPI*VSGLGV Trigger: TACTCCTAACCCACTTACCCAGATTGGCGCTGTTCC...ACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475204.5 |
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| 3UTR-3UTR TCA 90 bp | AGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTGTGCTCTCATCGATTTTTAAGTCATaGACCAAACGTAAGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SHEPNVSKHSRFSRGVLSSIFKS*TKRKQA Trigger: TGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGA...TGAGAGCACACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTGTGCTCTCAGCACTTAAGAGAAACTaGATAAGCTGCAGAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SHEPNVSKHSRFSRGVLSALKRN*ISCRRK Trigger: TTTTCTTCTGCAGCTTATCCAGTTTCTCTTAAGTGC...TGAGAGCACACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| 3UTR CAA 90 bp | GTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTaGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAATGTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: VWRQCLISTGYLLKG*CPSATLPLCRKCSL Trigger: CAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGATGCAGGTATACAGTTaGACTCCCTCAGAGGCAATA | + |
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Preference number: 2 (lower is better) Translates to: TELGVEAVFDFNWLSVKRMQVYS*TPSEAI Trigger: TATTGCCTCTGAGGGAGTCCAACTGTATACCTGCAT...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR CAA 90 bp | AATTTACTATCAAATACACAACAGAACTCGGTGTGGAGGCAGTGTTaGATTTCAACTGGTTATCTGTTAAAAGGCTTGTGTCCCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: NLLSNTQQNSVWRQC*ISTGYLLKGLCPSA Trigger: TGCACTGGGACACAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGTTGTGTATTTGATAGTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGTATACTAAAGTTCATTaGTTTATCCAACCCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: TELGVEAVFDFNWLSVKRYTKVH*FIQPHS Trigger: GGAATGGGGTTGGATAAAGCAATGAACTTTAGTATA...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTATCGATTTTTAAGTCATaGACCAAACGTAAGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SFIRNNSCTRFLSHEPNVSIFKS*TKRKQA Trigger: TGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGA...TACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGATGAAGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000473950.5 ENST00000475204.5 |
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| 3UTR-3UTR TCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAAACAGTAGATACATATTaGCAGCTTCTATACTACTCC | + |
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Preference number: 2 (lower is better) Translates to: LRMDNLHCSILSVALLLKTVDTY*QLLYYS Trigger: GGAGTAGTATAGAAGCTGTCAATATGTATCTACTGT...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR-3UTR GCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAATTTGACTTACAAAAATaGCCATGTCACATGGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: LRMDNLHCSILSVALLLKFDLQK*PCHMVH Trigger: GTGAACCATGTGACATGGGCATTTTTGTAAGTCAAA...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAAAATGCCCATGTCACATaGTTCACCTTTTATCTACTA | + |
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Preference number: 2 (lower is better) Translates to: LRMDNLHCSILSVALLLKNAHVT*FTFYLL Trigger: TAGTAGATAAAAGGTGAACCATGTGACATGGGCATT...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR-3UTR CAA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGGATGCAGGTATACAGTaGGACTCCCTCAGAGGCAAT | + |
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Preference number: 3 (lower is better) Translates to: TELGVEAVFDFNWLSVKRDAGIQ*DSLRGN Trigger: ATTGCCTCTGAGGGAGTCCAACTGTATACCTGCATC...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR TCA 72 bp | TGGTATTTTCAGCAGGGCCTGGTATATAGTTCAGGCTaGACCAGGGAAAAGAACTTCTGCATATGGTACGAC | + |
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Preference number: 3 (lower is better) Translates to: WYFQQGLVYSSG*TREKNFCIWYD Trigger: GTCGTACCATATGCAGAAGTTCTTTTCCCTGGTTCAGCCTGAACTATATACCAGGCCCTGCTGAAAATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| 3UTR CCA 72 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTaGTTATCTGTTAAAAGGCTTGTGTCCCAGTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: TELGVEAVFDFN*LSVKRLVSQCN Trigger: GTTGCACTGGGACACAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR-3UTR CAA 90 bp | AACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTGCTTCACTGTAGCATCTaGTCAGTGGCACTACTTTTA | + |
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Preference number: 3 (lower is better) Translates to: NSVWRQCLISTGYLLKGLLHCSI*SVALLL Trigger: TAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAG...CAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR CCA 72 bp | GCTGCTTCAAATATGTACAGGGCACTTAAGAGAAACTaGATAAGCTGCAGAAGAAAACTGTTGGGTGGTATT | + |
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Preference number: 3 (lower is better) Translates to: AASNMYRALKRN*ISCRRKLLGGI Trigger: AATACCACCCAACAGTTTTCTTCTGCAGCTTATCCAGTTTCTCTTAAGTGCCCTGTACATATTTGAAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| 3UTR GCA 72 bp | TTCAACTGGTTATCTGTTAAAAGGCTTGTGTCCCAGTaGAACACTACCTTTGTGCAGAAAATGTTCACTGAA | + |
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Preference number: 3 (lower is better) Translates to: FNWLSVKRLVSQ*NTTFVQKMFTE Trigger: TTCAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCTTTTAACAGATAACCAGTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| 3UTR CCA 72 bp | ATCAATTTACTATCAAATACACAACAGAACTCGGTGTaGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTA | + |
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Preference number: 3 (lower is better) Translates to: INLLSNTQQNSV*RQCLISTGYLL Trigger: TAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGTTGTGTATTTGATAGTAAATTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | GGTATTTTCAGCAGGGCCTGGTATATAGTTCAGGCTGAACCAGGGAAAAGAACTAGCCTCTGCTACTGCTaGCGATGCCGCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GIFSRAWYIVQAEPGKRTSLCYC*RCRRRR Trigger: GCGGCGGCGGCGGCATCGGCAGCAGTAGCAGAGGCT...AGTTCTTTTCCCTGGTTCAGCCTGAACTATATACCAGGCCCTGCTGAAAATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGGCCTGGTATATAGTTCAGGCTGAACCAGGGAAAAGAACTTCTGCATATGAGACATTAGTCACCTaGATTACCTCGGTGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SRAWYIVQAEPGKRTSAYETLVT*ITSVPP Trigger: CGGCGGCACCGAGGTAATCCAGGTGACTAATGTCTC...ATATGCAGAAGTTCTTTTCCCTGGTTCAGCCTGAACTATATACCAGGCCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR GCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGACCGCCGTCTCGATCTaGTTCTTGACCGCCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRTAVSI*FLTACV Trigger: GACACAGGCGGTCAAGAAGCAGATCGAGACGGCGGT...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGTGTTGCTCATGGCGCTaGTCGGGTTCTCGCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRCCSWR*SGSRSC Trigger: ACAGGAGCGAGAACCCGAGCAGCGCCATGAGCAACA...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR TCA 90 bp | CGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTAAAGCAGACACGAGATaGGACTGGCAAAGGCGAATC | + |
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Preference number: 4 (lower is better) Translates to: RFLSHEPNVSKHSRFSRGKADTR*DWQRRI Trigger: GATTCGCCTTTGCCAGTCTCATCTCGTGTCTGCTTT...ACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475204.5 |
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| CDS-3UTR CCA 90 bp | AGGCTTGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAATGTTCACTGAAAATGAGACATTAGTCACCTaGATTACCTCGGTGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: RLVSQCNTTFVQKMFTENETLVT*ITSVPP Trigger: CGGCGGCACCGAGGTAATCCAGGTGACTAATGTCTC...ATTTTCAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR CCA 90 bp | CTGTTGGGTGGTATTTTCAGCAGGGCCTGGTATATAGTTCAGGCTGAACCAGGGATTTTCAGCAGGGCCTaGTATATAGTTCAGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLGGIFSRAWYIVQAEPGIFSRA*YIVQAE Trigger: TTCAGCCTGAACTATATACCAGGCCCTGCTGAAAAT...CCCTGGTTCAGCCTGAACTATATACCAGGCCCTGCTGAAAATACCACCCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR TCA 90 bp | AACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTGCCTAGACTTAGAATGTaGCCGCCGTCTCGATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NSVWRQCLISTGYLLKGLPRLRM*PPSRSA Trigger: AGCAGATCGAGACGGCGGTCACATTCTAAGTCTAGG...CAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | CGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTGGTTCTCCAGGGGTGTaGTCTCAACTTTCAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: RFLSHEPNVSKHSRFSRGGSPGV*SQLSKA Trigger: AGCTTTTGAAAGTTGAGAGCACACCCCTGGAGAACC...ACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000473950.5 ENST00000475204.5 |
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| CDS-3UTR GCA 90 bp | AATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGATGCTACAGCCTCTaGTACTGCTGCCGATGCCGC | + |
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Preference number: 4 (lower is better) Translates to: NNSCTRFLSHEPNVSKHSRCYSL*YCCRCR Trigger: GCGGCATCGGCAGCAGTAGCAGAGGCTGTAGCATCG...ACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR GCA 90 bp | AGCTTCATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTATGTTGCTCATGGCGCTaGTCGGGTTCTCGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SFIRNNSCTRFLSHEPNVCCSWR*SGSRSC Trigger: GCAGGAGCGAGAACCCGAGCAGCGCCATGAGCAACA...TACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGATGAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR GCA 90 bp | AGCTTCATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTATGTTGCTCATGGCGCTaGTCGGGTTCTCGCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SFIRNNSCTRFLSHEPNVCCSWR*SGSRSS Trigger: CGAGGAGCGAGAACCCGAGCAGCGCCATGAGCAACA...TACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGATGAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475204.5 |
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| CDS-3UTR TCA 90 bp | CGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTTCAAAAGCTGTTTTATaGACAACGACTCGTGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: RFLSHEPNVSKHSRFSRGSKAVL*TTTRVG Trigger: GCCGACACGAGTCGTTGTTCATAAAACAGCTTTTGA...ACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000473950.5 ENST00000475204.5 |
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| CDS-3UTR TCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGTCTCGATCTGCTTCTTaGCCGCCTGTGTCTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRSRSAS*PPVSRR Trigger: TCTTCTAGACACAGGCGGTCAAGAAGCAGATCGAGA...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | AACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTGTCGTCTCTCTCTGCTTaGACTTCTAGAACGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NSVWRQCLISTGYLLKGLSSLSA*TSRTSG Trigger: GCCAGACGTTCTAGAAGTGCAAGCAGAGAGAGACGA...CAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGAGGCTTGTGTCCCAGTaGAACACTACCTTTGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRRLVSQ*NTTFVQ Trigger: CTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCT...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | CGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTCGGCTGCTTCACTTCTaGATATGGTACGACTATCAA | + |
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Preference number: 4 (lower is better) Translates to: RFLSHEPNVSKHSRFSRGRLLHF*IWYDYQ Trigger: TTGATAGTCGTACCATATGCAGAAGTGAAGCAGCCG...ACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475204.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGGCCTGGTATATAGTTCAGGCTGAACCAGGGAAAAGAACTTCTGCATATAAGAAAACTGTTGGGTaGTATTTTCAGCAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SRAWYIVQAEPGKRTSAYKKTVG*YFQQGL Trigger: CAGGCCCTGCTGAAAATACCACCCAACAGTTTTCTT...ATATGCAGAAGTTCTTTTCCCTGGTTCAGCCTGAACTATATACCAGGCCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR CCA 90 bp | ATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGGAGACATTAGTCACCTaGATTACCTCGGTGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: IRNNSCTRFLSHEPNVSKETLVT*ITSVPP Trigger: CGGCGGCACCGAGGTAATCCAGGTGACTAATGTCTC...CTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000473950.5 ENST00000475204.5 |
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| CDS-3UTR CCA 90 bp | AGAAAACTGTTGGGTGGTATTTTCAGCAGGGCCTGGTATATAGTTCAGGCTGAAGCAGAAGAAAACTGTTaGGTGGTATTTTCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RKLLGGIFSRAWYIVQAEAEENC*VVFSAG Trigger: CCCTGCTGAAAATACCACCCAACAGTTTTCTTCTGC...TTCAGCCTGAACTATATACCAGGCCCTGCTGAAAATACCACCCAACAGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR TCA 90 bp | GGTGGTATTTTCAGCAGGGCCTGGTATATAGTTCAGGCTGAACCAGGGAAAAGATCGATTTTTAAGTCATaGACCAAACGTAAGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: GGIFSRAWYIVQAEPGKRSIFKS*TKRKQA Trigger: TGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGA...TCTTTTCCCTGGTTCAGCCTGAACTATATACCAGGCCCTGCTGAAAATACCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR TCA 90 bp | GCTCTCAACTTTCAAAAGCTGTTTTATGAACAACGACTCGTGTCGGCTGCTTCAGTATATAGTTCAGGCTaGACCAGGGAAAAGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: ALNFQKLFYEQRLVSAASVYSSG*TREKNF Trigger: GAAGTTCTTTTCCCTGGTTCAGCCTGAACTATATAC...TGAAGCAGCCGACACGAGTCGTTGTTCATAAAACAGCTTTTGAAAGTTGAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR CCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAAAGATCTTCTCCGCCTTaGGCTTTTGGATCGTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: LRMDNLHCSILSVALLLKRSSPP*AFGSSP Trigger: CGGCGACGATCCAAAAGCCCAAGGCGGAGAAGATCT...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR CCA 90 bp | AGGCTTGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAATGTTCACTGAAAATATGCAGGTATACAGTTaGACTCCCTCAGAGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: RLVSQCNTTFVQKMFTENMQVYS*TPSEAI Trigger: TATTGCCTCTGAGGGAGTCCAACTGTATACCTGCAT...ATTTTCAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR CCA 90 bp | AGGCTTGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAATGTTCACTGAAAATCAACAGAACTCGGTGTaGAGGCAGTGTTTGATTTCA | + |
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Preference number: 4 (lower is better) Translates to: RLVSQCNTTFVQKMFTENQQNSV*RQCLIS Trigger: TGAAATCAAACACTGCCTCCACACCGAGTTCTGTTG...ATTTTCAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR TCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAACCTCTTTCTCTGGAATaGGATCTTCTCCGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LRMDNLHCSILSVALLLKPLSLE*DLLRLG Trigger: CCCAAGGCGGAGAAGATCTCATTCCAGAGAAAGAGG...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR TCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTCTTCTTGCTTGTTaGTCGTTCTCTTTCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRLLLAC*SFSFIP Trigger: AGGGATGAAAGAGAACGATCAACAAGCAAGAAGAAG...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR TCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGTGTGGAGGCAGTGTTTaGTTTCAACTGGTTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRCGGSV*FQLVIC Trigger: ACAGATAACCAGTTGAAATCAAACACTGCCTCCACA...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | AACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTGCTCTTGTTTTTGATGTaGTCCTTGACCTTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSVWRQCLISTGYLLKGLLLFLM*SLTFYL Trigger: GAGGTAGAAGGTCAAGGAGCACATCAAAAACAAGAG...CAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | GCCTGGTATATAGTTCAGGCTGAACCAGGGAAAAGAACTTCTGCATATGGTACGAGGGAAAAGAACTTCTaGATATGGTACGACTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: AWYIVQAEPGKRTSAYGTREKNF*IWYDYQ Trigger: TTGATAGTCGTACCATATGCAGAAGTTCTTTTCCCT...CGTACCATATGCAGAAGTTCTTTTCCCTGGTTCAGCCTGAACTATATACCAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR GCA 90 bp | AATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTACGACTCGTGTCGGCTaGTTCACTTCTGCATATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNSCTRFLSHEPNVSKHSTTRVG*FTSAYG Trigger: ACCATATGCAGAAGTGAAGCAGCCGACACGAGTCGT...ACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475204.5 |
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| CDS-3UTR CCA 90 bp | AGGCTTGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAATGTTCACTGAAAATGCTGAGTCTGGATCATaGAACTTAACAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RLVSQCNTTFVQKMFTENAESGS*NLTKQT Trigger: TGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGC...ATTTTCAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR CCA 90 bp | CGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTGCACTTAAGAGAAACTaGATAAGCTGCAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLSHEPNVSKHSRFSRGALKRN*ISCRRK Trigger: TTTTCTTCTGCAGCTTATCCAGTTTCTCTTAAGTGC...ACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473950.5 |
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| CDS-3UTR TCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAAAAAGCAGACACGAGATaGGACTGGCAAAGGCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LRMDNLHCSILSVALLLKKADTR*DWQRRI Trigger: GATTCGCCTTTGCCAGTCTCATCTCGTGTCTGCTTT...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR GCA 90 bp | AATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTGGTTCTCCAGGGGTGTaGTCTCAACTTTCAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NNSCTRFLSHEPNVSKHSGSPGV*SQLSKA Trigger: AGCTTTTGAAAGTTGAGAGCACACCCCTGGAGAACC...ACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000473950.5 ENST00000475204.5 |
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| CDS-3UTR GCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAAATCTTGTGCCACTCCTaGTTCTTCGTCGTCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRMDNLHCSILSVALLLKILCHS*FFVVVS Trigger: AGAGACGACGACGAAGAAGCAGGAGTGGCACAAGAT...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR CCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAAGGAACAGCGCCAATCTaGGTAAGTGGGTTAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRMDNLHCSILSVALLLKGTAPI*VSGLGV Trigger: TACTCCTAACCCACTTACCCAGATTGGCGCTGTTCC...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS-3UTR TCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAACTCGCTCCTGTTGATTaGAGTAATTCCAGGACGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LRMDNLHCSILSVALLLKLAPVD*SNSRTL Trigger: TAGCGTCCTGGAATTACTTCAATCAACAGGAGCGAG...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR GCA 90 bp | AATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCTTCAGCAACTGATCTaGAGCAAGAGACTGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NNSCTRFLSHEPNVSKHSLQQLI*SKRLRV Trigger: AACTCTCAGTCTCTTGCTGCAGATCAGTTGCTGAAG...ACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475204.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGAGGAATAACTCCTTCTaGATATGGTACGACTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRRNNSF*IWYDYQ Trigger: TTGATAGTCGTACCATATGCAGAAGGAGTTATTCCT...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGAATGCCCATGTCACATaGTTCACCTTTTATCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRNAHVT*FTFYLL Trigger: TAGTAGATAAAAGGTGAACCATGTGACATGGGCATT...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| 3UTR CAA 72 bp | CAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTaGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QCLISTGYLLKG*CPSATLPLCRK Trigger: TTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR GCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAACTTCAGCAACTGATCTaGAGCAAGAGACTGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRMDNLHCSILSVALLLKLQQLI*SKRLRV Trigger: AACTCTCAGTCTCTTGCTGCAGATCAGTTGCTGAAG...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CCA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGGCTGTAACTTTTTGGTaGTGTTTTAGAACGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TELGVEAVFDFNWLSVKRAVTFW*CFRTFL Trigger: AAGAAACGTTCTAAAACACCACCAAAAAGTTACAGC...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CCA 90 bp | AATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTGCTGAGTCTGGATCATaGAACTTAACAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NNSCTRFLSHEPNVSKHSAESGS*NLTKQT Trigger: TGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGC...ACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475204.5 |
||
| CDS-3UTR TCA 90 bp | AATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTTCGATTTTTAAGTCATaGACCAAACGTAAGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNSCTRFLSHEPNVSKHSSIFKS*TKRKQA Trigger: TGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGA...ACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000473950.5 ENST00000475204.5 |
||
| CDS-3UTR GCA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAATATACTAAAGTTCATTaGTTTATCCAACCCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRMDNLHCSILSVALLLKYTKVH*FIQPHS Trigger: GGAATGGGGTTGGATAAAGCAATGAACTTTAGTATA...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTCCGCCTTGGGCTTTaGGATCGTCGCCGACTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: TELGVEAVFDFNWLSVKRLRLGL*DRRRLL Trigger: TAGGAGTCGGCGACGATCCAAAAGCCCAAGGCGGAG...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS TCA 90 bp | TACACAGCCCTCTGTGACCCTTGTCCTGGAAACGTTACACATAACTaGGCATTCACTTATCAAACATTGTCACGACTGTGCACCTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: YTALCDPCPGNVTHN*AFTYQTLSRLCTLY Trigger: GTATAAGGTGCACAGTCGTGACAATGTTTGATAAGTGAATGCTCAGTTATGTGTAACGTTTCCAGGACAAGGGTCACAGAGGGCTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461935.1 |
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| CDS-3UTR CAA 90 bp | AACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTGGGGTTCTCGCTCCTGTaGATTGAAGTAATTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NSVWRQCLISTGYLLKGLGFSLL*IEVIPG Trigger: TCCTGGAATTACTTCAATCAACAGGAGCGAGAACCC...CAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | AGAAAACTGTTGGGTGGTATTTTCAGCAGGGCCTGGTATATAGTTCAGGCTGAACAACGAATACAGTGTTaGTCAGATGCTGTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: RKLLGGIFSRAWYIVQAEQRIQC*SDAVPQ Trigger: TTGTGGCACAGCATCTGACAAACACTGTATTCGTTG...TTCAGCCTGAACTATATACCAGGCCCTGCTGAAAATACCACCCAACAGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473950.5 |
||
| CDS-3UTR CAA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCAACGAATACAGTGTTaGTCAGATGCTGTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: TELGVEAVFDFNWLSVKRQRIQC*SDAVPQ Trigger: TTGTGGCACAGCATCTGACAAACACTGTATTCGTTG...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTTGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAATGTTCACTGAAAATGTGTGGAGGCAGTGTTaGATTTCAACTGGTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLVSQCNTTFVQKMFTENVWRQC*ISTGYL Trigger: CAGATAACCAGTTGAAATCAAACACTGCCTCCACAC...ATTTTCAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
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| CDS CCA 90 bp | TCTTGCTTGTGTCAGAGCTGTCATCAATTTAGATACCAAGAGTTATaGAGGGGAAGGGGGAGAAGATCATTTAGATATAGGGCAGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SCLCQSCHQFRYQEL*RGRGRRSFRYRAVM Trigger: CATTACTGCCCTATATCTAAATGATCTTCTCCCCCTTCCCCTCCATAACTCTTGGTATCTAAATTGATGACAGCTCTGACACAAGCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484162.5 |
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| CDS-3UTR CAA 90 bp | AGGCTTGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAATGTTCACTGAAAATTCTTCTTCTTGCTTGTaGATCGTTCTCTTTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLVSQCNTTFVQKMFTENSSSCL*IVLFHP Trigger: GGGATGAAAGAGAACGATCAACAAGCAAGAAGAAGA...ATTTTCAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTTGTGTCCCAGTGCAACACTACCTTTGTGCAGAAAATGTTCACTGAAAATTATCTGTTAAAAGGCTaGTGTCCCAGTGCAACACTA | + |
|
Preference number: 5 (lower is better) Translates to: RLVSQCNTTFVQKMFTENYLLKG*CPSATL Trigger: TAGTGTTGCACTGGGACACAAGCCTTTTAACAGATA...ATTTTCAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACTGGGACACAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAAGATGCAGGTATACAGTaGGACTCCCTCAGAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRMDNLHCSILSVALLLKDAGIQ*DSLRGN Trigger: ATTGCCTCTGAGGGAGTCCAACTGTATACCTGCATC...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | ACAGAACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTTCTTTTTGTCTCTaGTTTTTGATGTGCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TELGVEAVFDFNWLSVKRLSFCL*FLMCSL Trigger: CAAGGAGCACATCAAAAACAAGAGACAAAAAGAAAG...CCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | AACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTGTCTTCTTCTTCTTGCTaGTTGATCGTTCTCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NSVWRQCLISTGYLLKGLSSSSC*LIVLFH Trigger: ATGAAAGAGAACGATCAACAAGCAAGAAGAAGAAGA...CAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | AACTCGGTGTGGAGGCAGTGTTTGATTTCAACTGGTTATCTGTTAAAAGGCTTGTTACTCTTCTTCTTCTaGCTTGTTGATCGTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSVWRQCLISTGYLLKGLLLFFF*LVDRSL Trigger: AAGAGAACGATCAACAAGCAAGAAGAAGAAGAGTAA...CAAGCCTTTTAACAGATAACCAGTTGAAATCAAACACTGCCTCCACACCGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCAACGAATACAGTGTTaGTCAGATGCTGTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: IRNNSCTRFLSHEPNVSKQRIQC*SDAVPQ Trigger: TTGTGGCACAGCATCTGACAAACACTGTATTCGTTG...CTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000473950.5 ENST00000475204.5 |
||
| CDS-3UTR CAA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAACTTCACTGTAGCATCTaGTCAGTGGCACTACTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LRMDNLHCSILSVALLLKLHCSI*SVALLL Trigger: TAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAG...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS-3UTR CAA 90 bp | CTAAGAATGGATAATCTTCACTGTAGCATCTTGTCAGTGGCACTACTTTTAAAAAGTGCAACACTACCTTaGTGCAGAAAATGTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LRMDNLHCSILSVALLLKSATLP*CRKCSL Trigger: CAGTGAACATTTTCTGCACAAAGGTAGTGTTGCACT...TTTTAAAAGTAGTGCCACTGACAAGATGCTACAGTGAAGATTATCCATTCTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370950.7 |
||
| CDS GCA 90 bp | ATTTTCTTTCCCGGTCCTTTTCCTTATCTTTACTCTTCTTCTTCTTaGTTGTTGATCGTTCTCTTTCATCCCTACTTCTTTCTTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IFFPGPFPYLYSSSS*LLIVLFHPYFFLCL Trigger: AAGACAAAGAAAGAAGTAGGGATGAAAGAGAACGATCAACAAGCAAGAAGAAGAAGAGTAAAGATAAGGAAAAGGACCGGGAAAGAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000370949.1 ENST00000370950.7 ENST00000370951.5 ENST00000460795.5 ENST00000461935.1 ENST00000463859.5 ENST00000484162.5 ENST00000489188.1 |
||
| CDS TCA 72 bp | ATCTTTTCTATCTCTTTGCCACCTATCCCTCAGGCCTaGTTCAGCATTTCCTTCTGTACTTACATTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: IFSISLPPIPQA*FSISFCTYIWF Trigger: AAACCAAATGTAAGTACAGAAGGAAATGCTGAATCAGGCCTGAGGGATAGGTGGCAAAGAGATAGAAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461935.1 |
||
| CDS TCA 72 bp | CTTTTGCTGACTCATGAAAATGAATATGAATGTTTCTaGAGGTCTCTGAATACACACAGGATGTGTGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLTHENEYECF*RSLNTHRMCAW Trigger: CCATGCACACATCCTGTGTGTATTCAGAGACCTTCAGAAACATTCATATTCATTTTCATGAGTCAGCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370949.1 ENST00000484162.5 |
||
| CDS CAA 90 bp | GCATTCACTTATCAAACATTGTCACGACTGTGCACCTTATACTTTTaGCTACTGTCTTATGTAACTGAAACTCCAAATTCTCTAGACGGA | + |
|
Preference number: 6 (lower is better) Translates to: AFTYQTLSRLCTLYF*LLSYVTETPNSLDG Trigger: TCCGTCTAGAGAATTTGGAGTTTCAGTTACATAAGACAGTAGCAAAAAGTATAAGGTGCACAGTCGTGACAATGTTTGATAAGTGAATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461935.1 |
||
| CDS CCA 72 bp | AAAACATACAATATGTACAGGGCACTTAAGAGAAACTaGATAAGCTGCAGAAGAAAACTGTTGGGTGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: KTYNMYRALKRN*ISCRRKLLGGI Trigger: AATACCACCCAACAGTTTTCTTCTGCAGCTTATCCAGTTTCTCTTAAGTGCCCTGTACATATTGTATGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000463116.1 ENST00000469170.5 ENST00000484162.5 |
||
| CDS CAA 90 bp | TTCTTTCCCGGTCCTTTTCCTTATCTTTACTCTTCTTCTTCTTGCTaGTTGATCGTTCTCTTTCATCCCTACTTCTTTCTTTGTCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: FFPGPFPYLYSSSSC*LIVLFHPYFFLCLY Trigger: ATAAAGACAAAGAAAGAAGTAGGGATGAAAGAGAACGATCAACAAGCAAGAAGAAGAAGAGTAAAGATAAGGAAAAGGACCGGGAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000370949.1 ENST00000370950.7 ENST00000370951.5 ENST00000460795.5 ENST00000461935.1 ENST00000463859.5 ENST00000484162.5 ENST00000489188.1 |
||
| CDS TCA 72 bp | GTGCACCTTATACTTTTTGCTACTGTCTTATGTAACTaGAACTCCAAATTCTCTAGACGGAAGAAGTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: VHLILFATVLCN*NSKFSRRKKYF Trigger: AAAATACTTCTTCCGTCTAGAGAATTTGGAGTTTCAGTTACATAAGACAGTAGCAAAAAGTATAAGGTGCAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000461935.1 |
||
| CDS CAA 72 bp | TATCAAACATTGTCACGACTGTGCACCTTATACTTTTaGCTACTGTCTTATGTAACTGAAACTCCAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: YQTLSRLCTLYF*LLSYVTETPNS Trigger: AGAATTTGGAGTTTCAGTTACATAAGACAGTAGCAAAAAGTATAAGGTGCACAGTCGTGACAATGTTTGATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461935.1 |
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