RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRPX (Homo sapiens)

Ensembl gene IDs: ENSG00000101955

Ensembl transcript IDs: ENST00000378533.4, ENST00000432886.6, ENST00000461865.1, ENST00000479015.1, ENST00000538295.5, ENST00000544439.5

Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTaGCTCATTTCGGCTTGTAGGACCATCTCTTCTTTTCTCAAGGGA +
Preference number: 1 (lower is better)
Translates to: EELPREEPSCQVLQV*LISACRTISSFLKG
Trigger: TCCCTTGAGAAAAGAAGAGATGGTCCTACAAGCCGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538295.5
3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATaGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: KAFPCACHYVDNEEE*PREEPSCQVLQVWL
Trigger: GAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
3UTR-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATGCCTGTGTATGGTTATaGGTTCTAATTTCTCTACAA +
Preference number: 2 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDACVWL*VLISLQ
Trigger: TTGTAGAGAAATTAGAACCCATAACCATACACAGGC...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
3UTR CCA 72 bp CCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTaGCTCATTTCGGCTTGTAGGACCATCTCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: PREEPSCQVLQV*LISACRTISSF
Trigger: AAAAGAAGAGATGGTCCTACAAGCCGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
3UTR-3UTR CAA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATGACAATGAAGAGGAATaGCCAAGAGAGGAACCATCA +
Preference number: 3 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDDNEEE*PREEPS
Trigger: TGATGGTTCCTCTCTTGGCAATTCCTCTTCATTGTC...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
3UTR-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGACAATGAAGAGGAATaGCCAAGAGAGGAACCATCA +
Preference number: 3 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIDNEEE*PREEPS
Trigger: TGATGGTTCCTCTCTTGGCAATTCCTCTTCATTGTC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
3UTR CCA 72 bp ACATTGAATAACATGTTGATAGCCTGTGTATGGTTATaGGTTCTAATTTCTCTACAAAATCAAGCAGCCATG +
Preference number: 3 (lower is better)
Translates to: TLNNMLIACVWL*VLISLQNQAAM
Trigger: CATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTCCATGCCATGATCCACACAGGAGGCTaGCCGGCCGCTCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: EQGHRHHQGDIALFVHAMIHTGG*PAAPGL
Trigger: AAGGCCTGGAGCGGCCGGCCAGCCTCCTGTGTGGAT...CATGGCATGGACAAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp GAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTCCATGCCATGAAGAGACCAAGGGACTaGGTGCTAGCGGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: EQGHRHHQGDIALFVHAMKRPRD*VLAGGR
Trigger: TCGCCCGCCCGCTAGCACGCAGTCCCTTGGTCTCTT...CATGGCATGGACAAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp GAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGCAGCGCGGGCCGATGTaGGGGGCTCCCCATGGCGAG +
Preference number: 4 (lower is better)
Translates to: ELPREEPSCQVLQVWLISQRGPM*GAPHGE
Trigger: CTCGCCATGGGGAGCCCCGCACATCGGCCCGCGCTG...CGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CCA 90 bp GAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTCCATGCCATGTCATGGCTGCACAGGTaGGCTCCGTGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: EQGHRHHQGDIALFVHAMSWLHR*APCQTK
Trigger: CTTGGTCTGGCACGGAGCCCACCTGTGCAGCCATGA...CATGGCATGGACAAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp GAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTCCATGCCATGGCTCATAGCCGCCGATaGAGGAGAACTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: EQGHRHHQGDIALFVHAMAHSRR*RRTHRW
Trigger: CCACCTGTGAGTTCTCCTGCATCGGCGGCTATGAGC...CATGGCATGGACAAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAGGGTATCTGGGAAGCTaGGGCTGGGCGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRGYLGS*GWAGRA
Trigger: TGCGCGTCCCGCCCAGCCGCAGCTTCCCAGATACCC...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCAGCGCGGGCCGATGTaGGGGGCTCCCCATGGCGAG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDQRGPM*GAPHGE
Trigger: CTCGCCATGGGGAGCCCCGCACATCGGCCCGCGCTG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GTCAATCAGGTTGAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTCAGACCAAGCCAGGTTaGATTGACATACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VNQVEQGHRHHQGDIALFQTKPG*IDILGQ
Trigger: CTGCCCGAGTATGTCAATCCAACCTGGCTTGGTCTG...AAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTCAACCTGATTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAGGGCGAAGGCCGGGCTaGAAAACTCCTCCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRGRRPG*KTPPLA
Trigger: GGCGAGAGGAGGAGTTTTCCAGCCCGGCCTTCGCCC...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACCCCATACTTCACCTTaGTGGGGGAGCACCACGGGG +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRPHTSP*WGSTTG
Trigger: CCCCGTGGTGCTCCCCCATCAAGGTGAAGTATGGGG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCAGCGCGGGCCGATGTaGGGGGCTCCCCATGGCGAG +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSQRGPM*GAPHGE
Trigger: CTCGCCATGGGGAGCCCCGCACATCGGCCCGCGCTG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCCGATCCTGGGAAGCTaGGGCTGGGCGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDPILGS*GWAGRA
Trigger: TGCGCGTCCCGCCCAGCCGCAGCTTCCCAGGATCGG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
CDS-3UTR TCA 90 bp GGAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCCAAGCCAGGTTGGATTaGCATACTCGGGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: GIAKRGTIMSGVTGLAHFQARLD*HTRAGL
Trigger: TAGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTG...GAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCCGATCCTGGGAAGCTaGGGCTGGGCGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIPILGS*GWAGRA
Trigger: TGCGCGTCCCGCCCAGCCGCAGCTTCCCAGGATCGG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
CDS-3UTR GCA 90 bp GAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGCTCCTTGAGGGGCCCTaGAGTACACATCCCCATACT +
Preference number: 4 (lower is better)
Translates to: ELPREEPSCQVLQVWLISLLEGP*STHPHT
Trigger: AGTATGGGGATGTGTACTGCAGGGCCCCTCAAGGAG...CGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp GGAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCTTCGCAGCAACAGCCTaGAGCATTCCTAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GIAKRGTIMSGVTGLAHFFAATA*SIPSWS
Trigger: GCTCCAGCTAGGAATGCTGCAGGCTGTTGCTGCGAA...GAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CCA 90 bp TTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGCTAGCGAATGTCGCACCTaGTTCCCAGGGCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LPREEPSCQVLQVWLISASECRT*FPGLFC
Trigger: ACAAAACAGCCCTGGGAACCAGGTGCGACATTCGCT...AGCCGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATCATGGCTGCACAGGTaGGCTCCGTGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRSWLHR*APCQTK
Trigger: CTTGGTCTGGCACGGAGCCCACCTGTGCAGCCATGA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACCAGCTCCACCACGGTaGTGTGTCGAAGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRPAPPR*CVEDQG
Trigger: GCCTTGATCTTCGACACATCACCGTGGTGGAGCTGG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR CCA 90 bp CCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGCTTGTAAACCCTCCATTTGCTaGCATGGCAAGGGTAGGACA +
Preference number: 4 (lower is better)
Translates to: PREEPSCQVLQVWLISACKPSIC*HGKGRT
Trigger: TGTCCTACCCTTGCCATGCCAGCAAATGGAGGGTTT...ACAAGCCGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATATCCACACAGGAGGCTaGCCGGCCGCTCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDIHTGG*PAAPGL
Trigger: AAGGCCTGGAGCGGCCGGCCAGCCTCCTGTGTGGAT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp TTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGCTACTGAAGGAGTAGAGTaGGATTCGCAGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LPREEPSCQVLQVWLISATEGVE*DSQQQP
Trigger: AGGCTGTTGCTGCGAATCCCACTCTACTCCTTCAGT...AGCCGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATGGGCGAAGGCCGGGCTaGAAAACTCCTCCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDGRRPG*KTPPLA
Trigger: GGCGAGAGGAGGAGTTTTCCAGCCCGGCCTTCGCCC...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGCACCACGGGGTATCTaGGAAGCTGCGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIAPRGI*EAAAGR
Trigger: CCGCCCAGCCGCAGCTTCCCAGATACCCCGTGGTGC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544439.5
CDS-3UTR TCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCCCCATACTTCACCTTaGTGGGGGAGCACCACGGGG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDPHTSP*WGSTTG
Trigger: CCCCGTGGTGCTCCCCCATCAAGGTGAAGTATGGGG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACTCCTATCCTGCCAATaGGAGTCGGGAACACACCCA +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRLLSCQ*ESGTHP
Trigger: TGGGTGTGTTCCCGACTCTCATTGGCAGGATAGGAG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR TCA 90 bp GAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGCCACTAGCACCATACTaGAGGAGTAGAGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: ELPREEPSCQVLQVWLISPLAPY*RSRVGF
Trigger: GAATCCCACTCTACTCCTTCAGTATGGTGCTAGTGG...CGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR TCA 90 bp GGAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCAAGTGTCAATCAGGTTaGACAGGGCCACAGGCATCA +
Preference number: 4 (lower is better)
Translates to: GIAKRGTIMSGVTGLAHFKCQSG*TGPQAS
Trigger: TGATGCCTGTGGCCCTGTTCAACCTGATTGACACTT...GAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp GAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGCTTAAACCCTCCATTTaGTGGCATGGCAAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ELPREEPSCQVLQVWLISLKPSI*WHGKGR
Trigger: CCTACCCTTGCCATGCCAGCAAATGGAGGGTTTAAG...CGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp GGAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCTGTTGGGTTCTGCAATaGGTTCCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: GIAKRGTIMSGVTGLAHFCWVLQ*VPSHLG
Trigger: GCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACA...GAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp GTCAATCAGGTTGAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTCTCGAAATTTGCAAGTaGCCTTATTCTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VNQVEQGHRHHQGDIALFLEICK*PYSQLC
Trigger: ACAGAGCTGAGAATAAGGGCACTTGCAAATTTCGAG...AAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTCAACCTGATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR GCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGAAGAGACCAAGGGACTaGGTGCTAGCGGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELKRPRD*VLAGGR
Trigger: TCGCCCGCCCGCTAGCACGCAGTCCCTTGGTCTCTT...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCATCCACACAGGAGGCTaGCCGGCCGCTCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSIHTGG*PAAPGL
Trigger: AAGGCCTGGAGCGGCCGGCCAGCCTCCTGTGTGGAT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GTCAATCAGGTTGAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTAATTATCACCGTCGCTaGAGCACTTCATGTAACCAT +
Preference number: 4 (lower is better)
Translates to: VNQVEQGHRHHQGDIALFNYHRR*STSCNH
Trigger: ATGGTTACATGAAGTGCTCCAGCGACGGTGATAATT...AAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTCAACCTGATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCGGGCGAAGGCCGGGCTaGAAAACTCCTCCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSGRRPG*KTPPLA
Trigger: GGCGAGAGGAGGAGTTTTCCAGCCCGGCCTTCGCCC...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATGTTGTCCATACATGTaGCGGTCCGCTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRCCPYM*RSAPLS
Trigger: TGAAAGGGGAGCGGACCGTCACATGTATGGACAACA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTAAGAGACCAAGGGACTaGGTGCTAGCGGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIKRPRD*VLAGGR
Trigger: TCGCCCGCCCGCTAGCACGCAGTCCCTTGGTCTCTT...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAAGCGAATGTCGCACCTaGTTCCCAGGGCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRSECRT*FPGLFC
Trigger: ACAAAACAGCCCTGGGAACCAGGTGCGACATTCGCT...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGCTTGTAGGAGAACTCACAGGTaGCTCCATAATTATCACCGT +
Preference number: 4 (lower is better)
Translates to: PREEPSCQVLQVWLISACRRTHR*LHNYHR
Trigger: ACGGTGATAATTATGGAGCCACCTGTGAGTTCTCCT...ACAAGCCGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACAGACCAAGCCAGGTTaGATTGACATACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRQTKPG*IDILGQ
Trigger: CTGCCCGAGTATGTCAATCCAACCTGGCTTGGTCTG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp GGAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCCAACGTGTATCCTGGTaGACAATAATACTCACACCG +
Preference number: 4 (lower is better)
Translates to: GIAKRGTIMSGVTGLAHFQRVSW*TIILTP
Trigger: CGGTGTGAGTATTATTGTTCACCAGGATACACGTTG...GAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR TCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAGCTCCACCACGGTaGTGTGTCGAAGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELPAPPR*CVEDQG
Trigger: GCCTTGATCTTCGACACATCACCGTGGTGGAGCTGG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAAAGTGTCAATCAGGTTaGACAGGGCCACAGGCATCA +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRKCQSG*TGPQAS
Trigger: TGATGCCTGTGGCCCTGTTCAACCTGATTGACACTT...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATGTTGGGTTCTGCAATaGGTTCCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRCWVLQ*VPSHLG
Trigger: GCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATGCTCATAGCCGCCGATaGAGGAGAACTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDAHSRR*RRTHRW
Trigger: CCACCTGTGAGTTCTCCTGCATCGGCGGCTATGAGC...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAATCCAGAAGTGCAGCTaGCGTTCTGACACCCACATT +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRIQKCS*RSDTHI
Trigger: AATGTGGGTGTCAGAACGGCAGCTGCACTTCTGGAT...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAGCGTTCCTTCACACTTaGGCACTTGATTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRAFLHT*ALDSRR
Trigger: CCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGC...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCTCATGGCTGCACAGGTaGGCTCCGTGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSSWLHR*APCQTK
Trigger: CTTGGTCTGGCACGGAGCCCACCTGTGCAGCCATGA...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACAGGTGTTACAGGTCTaGCTCATTTCGGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRQVLQV*LISACR
Trigger: CCTACAAGCCGAAATGAGCCAGACCTGTAACACCTG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCAAGCCAGGTTGGATTaGCATACTCGGGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELQARLD*HTRAGL
Trigger: TAGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCAAGCCAGGTTGGATTaGCATACTCGGGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDQARLD*HTRAGL
Trigger: TAGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATGGGTGTGGACACAATaGGGAGTCTCCTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRWVWTQ*GVSFSH
Trigger: ATGAGAAAAGGAGACTCCTCATTGTGTCCACACCCA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCCAGCTCCACCACGGTaGTGTGTCGAAGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSPAPPR*CVEDQG
Trigger: GCCTTGATCTTCGACACATCACCGTGGTGGAGCTGG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR TCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCTCCTATCCTGCCAATaGGAGTCGGGAACACACCCA +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDLLSCQ*ESGTHP
Trigger: TGGGTGTGTTCCCGACTCTCATTGGCAGGATAGGAG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCTCCTTGAGGGGCCCTaGAGTACACATCCCCATACT +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDLLEGP*STHPHT
Trigger: AGTATGGGGATGTGTACTGCAGGGCCCCTCAAGGAG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGCTCATAGCCGCCGATaGAGGAGAACTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIAHSRR*RRTHRW
Trigger: CCACCTGTGAGTTCTCCTGCATCGGCGGCTATGAGC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCCACACTGTGCTTGCTaGAGCATTCCTAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDPHCAC*SIPSWS
Trigger: GCTCCAGCTAGGAATGCTGCAGCAAGCACAGTGTGG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR GCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCACACTGTGCTTGCTaGAGCATTCCTAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELPHCAC*SIPSWS
Trigger: GCTCCAGCTAGGAATGCTGCAGCAAGCACAGTGTGG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATAGGCCACACTGTGCTTaGTGCAGCATTCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDRPHCA*CSIPSW
Trigger: CCAGCTAGGAATGCTGCAGCAAGCACAGTGTGGCCT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCTTGTGGTCTCCTTCTaGAAAGTTGGAGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELLVVSF*KVGAWG
Trigger: CCCCCAGGCTCCAACTTTCCAGAAGGAGACCACAAG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCTTGTGGTCTCCTTCTaGAAAGTTGGAGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDLVVSF*KVGAWG
Trigger: CCCCCAGGCTCCAACTTTCCAGAAGGAGACCACAAG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
3UTR CAA 72 bp CCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATaGCCAAGAGAGGAACCATCATGTCAGGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: PCACHYVDNEEE*PREEPSCQVLQ
Trigger: CTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAGCTTTTGTTTGCAGATaGCCTTGTCAGACCATCGTT +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRAFVCR*PCQTIV
Trigger: AACGATGGTCTGACAAGGTCATCTGCAAACAAAAGC...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACAACGTGTATCCTGGTaGACAATAATACTCACACCG +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRQRVSW*TIILTP
Trigger: CGGTGTGAGTATTATTGTTCACCAGGATACACGTTG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGTGTTGTCCATACATGTaGCGGTCCGCTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELCCPYM*RSAPLS
Trigger: TGAAAGGGGAGCGGACCGTCACATGTATGGACAACA...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCTCCTTGAGGGGCCCTaGAGTACACATCCCCATACT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSLLEGP*STHPHT
Trigger: AGTATGGGGATGTGTACTGCAGGGCCCCTCAAGGAG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCTCCTTGAGGGGCCCTaGAGTACACATCCCCATACT +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLILLEGP*STHPHT
Trigger: AGTATGGGGATGTGTACTGCAGGGCCCCTCAAGGAG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAAGTAAGAATTCCATCTaGTGTGTCTCTTCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRSKNSI*CVSSFG
Trigger: CCCGAAGGAAGAGACACAGCAGATGGAATTCTTACT...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCCACACTGTGCTTGCTaGAGCATTCCTAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIPHCAC*SIPSWS
Trigger: GCTCCAGCTAGGAATGCTGCAGCAAGCACAGTGTGG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGGCCACACTGTGCTTaGTGCAGCATTCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSRPHCA*CSIPSW
Trigger: CCAGCTAGGAATGCTGCAGCAAGCACAGTGTGGCCT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR GCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATGGAGGCATAATCTTTaGTCCTATCCTGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRWRHNL*SYPANE
Trigger: CTCATTGGCAGGATAGGAGCAAAGATTATGCCTCCA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGAGCGAATGTCGCACCTaGTTCCCAGGGCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELSECRT*FPGLFC
Trigger: ACAAAACAGCCCTGGGAACCAGGTGCGACATTCGCT...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCTTGTGGTCTCCTTCTaGAAAGTTGGAGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSLVVSF*KVGAWG
Trigger: CCCCCAGGCTCCAACTTTCCAGAAGGAGACCACAAG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACATGTAACCATTCTCTaGGGCATTGAGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRHVTIL*GIEFAT
Trigger: TGTGGCAAACTCAATGCCCCAGAGAATGGTTACATG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCAGACCAAGCCAGGTTaGATTGACATACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELQTKPG*IDILGQ
Trigger: CTGCCCGAGTATGTCAATCCAACCTGGCTTGGTCTG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCAGACCAAGCCAGGTTaGATTGACATACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDQTKPG*IDILGQ
Trigger: CTGCCCGAGTATGTCAATCCAACCTGGCTTGGTCTG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATTTATATCTAGGGTGTaGATACCCGACTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRFISRV*IPDFIV
Trigger: GACGATGAAGTCGGGTATTCACACCCTAGATATAAA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
CDS-3UTR TCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTGTTGTCCATACATGTaGCGGTCCGCTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLICCPYM*RSAPLS
Trigger: TGAAAGGGGAGCGGACCGTCACATGTATGGACAACA...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCCACTAGCACCATACTaGAGGAGTAGAGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDPLAPY*RSRVGF
Trigger: GAATCCCACTCTACTCCTTCAGTATGGTGCTAGTGG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCTTAAACCCTCCATTTaGTGGCATGGCAAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDLKPSI*WHGKGR
Trigger: CCTACCCTTGCCATGCCAGCAAATGGAGGGTTTAAG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGATCCAGAAGTGCAGCTaGCGTTCTGACACCCACATT +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELIQKCS*RSDTHI
Trigger: AATGTGGGTGTCAGAACGGCAGCTGCACTTCTGGAT...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATAAACTGATCCAGAAGTaGAGCTGCCGTTCTGACACC +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDKLIQK*SCRSDT
Trigger: GGTGTCAGAACGGCAGCTGCACTTCTGGATCAGTTT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATCTTTGTCCATGCCATaGTTATCCACTAGCACCATA +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRSLSMP*LSTSTI
Trigger: TATGGTGCTAGTGGATAAGCATGGCATGGACAAAGA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCGAATGTCGCACCTaGTTCCCAGGGCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSSECRT*FPGLFC
Trigger: ACAAAACAGCCCTGGGAACCAGGTGCGACATTCGCT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATAAACCCTCCATTTGCTaGCATGGCAAGGGTAGGACA +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDKPSIC*HGKGRT
Trigger: TGTCCTACCCTTGCCATGCCAGCAAATGGAGGGTTT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGGCGTTCCTTCACACTTaGGCACTTGATTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELAFLHT*ALDSRR
Trigger: CCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGC...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATGCGTTCCTTCACACTTaGGCACTTGATTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDAFLHT*ALDSRR
Trigger: CCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGC...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATACTGAAGGAGTAGAGTaGGATTCGCAGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDTEGVE*DSQQQP
Trigger: AGGCTGTTGCTGCGAATCCCACTCTACTCCTTCAGT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGACTGAAGGAGTAGAGTaGGATTCGCAGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELTEGVE*DSQQQP
Trigger: AGGCTGTTGCTGCGAATCCCACTCTACTCCTTCAGT...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCAGGTGTTACAGGTCTaGCTCATTTCGGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELQVLQV*LISACR
Trigger: CCTACAAGCCGAAATGAGCCAGACCTGTAACACCTG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGCCTGTGTATGGTTATaGGTTCTAATTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: ELPREEPSCQVLQVWLISACVWL*VLISLQ
Trigger: TTGTAGAGAAATTAGAACCCATAACCATACACAGGC...CGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR TCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCCACTAGCACCATACTaGAGGAGTAGAGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIPLAPY*RSRVGF
Trigger: GAATCCCACTCTACTCCTTCAGTATGGTGCTAGTGG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTAAGTGTCAATCAGGTTaGACAGGGCCACAGGCATCA +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIKCQSG*TGPQAS
Trigger: TGATGCCTGTGGCCCTGTTCAACCTGATTGACACTT...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCTTAAACCCTCCATTTaGTGGCATGGCAAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLILKPSI*WHGKGR
Trigger: CCTACCCTTGCCATGCCAGCAAATGGAGGGTTTAAG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCATCCAGAAGTGCAGCTaGCGTTCTGACACCCACATT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSIQKCS*RSDTHI
Trigger: AATGTGGGTGTCAGAACGGCAGCTGCACTTCTGGAT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAAACTGATCCAGAAGTaGAGCTGCCGTTCTGACACC +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSKLIQK*SCRSDT
Trigger: GGTGTCAGAACGGCAGCTGCACTTCTGGATCAGTTT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTAAACTGATCCAGAAGTaGAGCTGCCGTTCTGACACC +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIKLIQK*SCRSDT
Trigger: GGTGTCAGAACGGCAGCTGCACTTCTGGATCAGTTT...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATAGCGCTCTTTGTCCATaGCATGCTTATCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDSALCP*HAYPLA
Trigger: TGCTAGTGGATAAGCATGGCATGGACAAAGAGCGCT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCGCGTTCCTTCACACTTaGGCACTTGATTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSAFLHT*ALDSRR
Trigger: CCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGC...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGGGACTGTCAGTTTGTTaGGTTCTGCAATGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELGLSVC*VLQCVP
Trigger: AGGAACGCATTGCAGAACCCAACAAACTGACAGTCC...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATGGACTGTCAGTTTGTTaGGTTCTGCAATGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDGLSVC*VLQCVP
Trigger: AGGAACGCATTGCAGAACCCAACAAACTGACAGTCC...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCACTGAAGGAGTAGAGTaGGATTCGCAGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSTEGVE*DSQQQP
Trigger: AGGCTGTTGCTGCGAATCCCACTCTACTCCTTCAGT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCAGGTGTTACAGGTCTaGCTCATTTCGGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIQVLQV*LISACR
Trigger: CCTACAAGCCGAAATGAGCCAGACCTGTAACACCTG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCAACGTGTATCCTGGTaGACAATAATACTCACACCG +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELQRVSW*TIILTP
Trigger: CGGTGTGAGTATTATTGTTCACCAGGATACACGTTG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTGGGTGTGGACACAATaGGGAGTCTCCTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIWVWTQ*GVSFSH
Trigger: ATGAGAAAAGGAGACTCCTCATTGTGTCCACACCCA...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCATATGTTTGCAGATaGCCTTGTCAGACCATCGTT +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELPYVCR*PCQTIV
Trigger: AACGATGGTCTGACAAGGTCATCTGCAAACATATGG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432886.6
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCAGTTTGTTGGGTTCTaGAATGCGTTCCTTCACACT +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDQFVGF*NAFLHT
Trigger: AGTGTGAAGGAACGCATTGCAGAACCCAACAAACTG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGAGTAAGAATTCCATCTaGTGTGTCTCTTCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELSKNSI*CVSSFG
Trigger: CCCGAAGGAAGAGACACAGCAGATGGAATTCTTACT...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATAGTAAGAATTCCATCTaGTGTGTCTCTTCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDSKNSI*CVSSFG
Trigger: CCCGAAGGAAGAGACACAGCAGATGGAATTCTTACT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGTGGAGGCATAATCTTTaGTCCTATCCTGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELWRHNL*SYPANE
Trigger: CTCATTGGCAGGATAGGAGCAAAGATTATGCCTCCA...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCGCTCTTTGTCCATaGCATGCTTATCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSSALCP*HAYPLA
Trigger: TGCTAGTGGATAAGCATGGCATGGACAAAGAGCGCT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGGACTGTCAGTTTGTTaGGTTCTGCAATGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIGLSVC*VLQCVP
Trigger: AGGAACGCATTGCAGAACCCAACAAACTGACAGTCC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCGGACTGTCAGTTTGTTaGGTTCTGCAATGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSGLSVC*VLQCVP
Trigger: AGGAACGCATTGCAGAACCCAACAAACTGACAGTCC...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATGTGTACTGGATCTTGTaGTCTCCTTCTGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDVYWIL*SPSGKL
Trigger: CAACTTTCCAGAAGGAGACCACAAGATCCAGTACAC...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCATGTAACCATTCTCTaGGGCATTGAGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELHVTIL*GIEFAT
Trigger: TGTGGCAAACTCAATGCCCCAGAGAATGGTTACATG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCATGTAACCATTCTCTaGGGCATTGAGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDHVTIL*GIEFAT
Trigger: TGTGGCAAACTCAATGCCCCAGAGAATGGTTACATG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATAGGAGAACTCACAGGTaGCTCCATAATTATCACCGT +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDRRTHR*LHNYHR
Trigger: ACGGTGATAATTATGGAGCCACCTGTGAGTTCTCCT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAGCCTGTGTATGGTTATaGGTTCTAATTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: KAFPCACHYVDNEEELPRACVWL*VLISLQ
Trigger: TTGTAGAGAAATTAGAACCCATAACCATACACAGGC...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGTTTATATCTAGGGTGTaGATACCCGACTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELFISRV*IPDFIV
Trigger: GACGATGAAGTCGGGTATTCACACCCTAGATATAAA...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
CDS-3UTR TCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATTTTATATCTAGGGTGTaGATACCCGACTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDFISRV*IPDFIV
Trigger: GACGATGAAGTCGGGTATTCACACCCTAGATATAAA...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
CDS-3UTR TCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCGCTTTTGTTTGCAGATaGCCTTGTCAGACCATCGTT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSAFVCR*PCQTIV
Trigger: AACGATGGTCTGACAAGGTCATCTGCAAACAAAAGC...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR TCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGCTTTTGTTTGCAGATaGCCTTGTCAGACCATCGTT +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIAFVCR*PCQTIV
Trigger: AACGATGGTCTGACAAGGTCATCTGCAAACAAAAGC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCAGTTTGTTGGGTTCTaGAATGCGTTCCTTCACACT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSQFVGF*NAFLHT
Trigger: AGTGTGAAGGAACGCATTGCAGAACCCAACAAACTG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGTAAGAATTCCATCTaGTGTGTCTCTTCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSSKNSI*CVSSFG
Trigger: CCCGAAGGAAGAGACACAGCAGATGGAATTCTTACT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCTCGAAATTTGCAAGTaGCCTTATTCTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELLEICK*PYSQLC
Trigger: ACAGAGCTGAGAATAAGGGCACTTGCAAATTTCGAG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATTCTTTGTCCATGCCATaGTTATCCACTAGCACCATA +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDSLSMP*LSTSTI
Trigger: TATGGTGCTAGTGGATAAGCATGGCATGGACAAAGA...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCATCGTTTGTTTGACTaGCAGATCAGTAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSHRLFD*QISREE
Trigger: CTCTTCCCTACTGATCTGCCAGTCAAACAAACGATG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGTGTACTGGATCTTGTaGTCTCCTTCTGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIVYWIL*SPSGKL
Trigger: CAACTTTCCAGAAGGAGACCACAAGATCCAGTACAC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCGTGTACTGGATCTTGTaGTCTCCTTCTGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSVYWIL*SPSGKL
Trigger: CAACTTTCCAGAAGGAGACCACAAGATCCAGTACAC...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATAATTATCACCGTCGCTaGAGCACTTCATGTAACCAT +
Preference number: 4 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDNYHRR*STSCNH
Trigger: ATGGTTACATGAAGTGCTCCAGCGACGGTGATAATT...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTAGGAGAACTCACAGGTaGCTCCATAATTATCACCGT +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIRRTHR*LHNYHR
Trigger: ACGGTGATAATTATGGAGCCACCTGTGAGTTCTCCT...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCTCGAAATTTGCAAGTaGCCTTATTCTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSLEICK*PYSQLC
Trigger: ACAGAGCTGAGAATAAGGGCACTTGCAAATTTCGAG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR GCA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTTTGTCCATGCCATaGTTATCCACTAGCACCATA +
Preference number: 4 (lower is better)
Translates to: GVTLNNMLIACVWLWVLISLSMP*LSTSTI
Trigger: TATGGTGCTAGTGGATAAGCATGGCATGGACAAAGA...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAATTATCACCGTCGCTaGAGCACTTCATGTAACCAT +
Preference number: 4 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSNYHRR*STSCNH
Trigger: ATGGTTACATGAAGTGCTCCAGCGACGGTGATAATT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CCA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGGCCTGTGTATGGTTATaGGTTCTAATTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: IFKAFPCACHYVDNEEELACVWL*VLISLQ
Trigger: TTGTAGAGAAATTAGAACCCATAACCATACACAGGC...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS GCA 90 bp AGCGCGCTTCCCGGGGGCGGCAGGAGACCGAAGAGACCAAGGGACTaGGTGCTAGCGGGCGGGCGAAGGCCGGGCTGGAAAACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SALPGGGRRPKRPRD*VLAGGRRPGWKTPP
Trigger: AGGAGGAGTTTTCCAGCCCGGCCTTCGCCCGCCCGCTAGCACGCAGTCCCTTGGTCTCTTCGGTCTCCTGCCGCCCCCGGGAAGCGCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CCA 90 bp CGTTCATGGCTGCACAGGTGGGCTCCGTGCCAGACCAAGCCAGGTTaGATTGACATACTCGGGCAGGGCTACCCTGGAGCTCATAGCCGC +
Preference number: 5 (lower is better)
Translates to: RSWLHRWAPCQTKPG*IDILGQGYPGAHSR
Trigger: GCGGCTATGAGCTCCAGGGTAGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTGGTCTGGCACGGAGCCCACCTGTGCAGCCATGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000479015.1
ENST00000538295.5
ENST00000544439.5
CDS CCA 90 bp AAGAGCCATGCAGCTCGTAGCCCTTCTGGCAGCGAATGTCGCACCTaGTTCCCAGGGCTGTTTTGTAGTATCCTCCTTGAGGGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: KSHAARSPSGSECRT*FPGLFCSILLEGPC
Trigger: GCAGGGCCCCTCAAGGAGGATACTACAAAACAGCCCTGGGAACCAGGTGCGACATTCGCTGCCAGAAGGGCTACGAGCTGCATGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTCCATGCCATGTCCCCATACTTCACCTaGATGGGGGAGCACCACGGG +
Preference number: 5 (lower is better)
Translates to: EQGHRHHQGDIALFVHAMSPYFT*MGEHHG
Trigger: CCCGTGGTGCTCCCCCATCAAGGTGAAGTATGGGGA...CATGGCATGGACAAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS CCA 90 bp GGCTACCCTGGAGCTCATAGCCGCCGATGCAGGAGAACTCACAGGTaGCTCCATAATTATCACCGTCGCTGGAGCACTTCATGTAACCAT +
Preference number: 5 (lower is better)
Translates to: GYPGAHSRRCRRTHR*LHNYHRRWSTSCNH
Trigger: ATGGTTACATGAAGTGCTCCAGCGACGGTGATAATTATGGAGCCACCTGTGAGTTCTCCTGCATCGGCGGCTATGAGCTCCAGGGTAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS GCA 90 bp TTCGGGTGTCTCCCAGGACACCCGGACTGTCAGTTTGTTGGGTTCTaGAATGCGTTCCTTCACACTTGGGCACTTGATTCTAGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: FGCLPGHPDCQFVGF*NAFLHTWALDSRRF
Trigger: GAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGGGTGTCCTGGGAGACACCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTCCATGCCATGGGTAGGACATCGCTTTaGTTTGCAGATGACCTTGTC +
Preference number: 5 (lower is better)
Translates to: EQGHRHHQGDIALFVHAMGRTSL*FADDLV
Trigger: GACAAGGTCATCTGCAAACAAAAGCGATGTCCTACC...CATGGCATGGACAAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CAA 90 bp GAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTCCATGCCATGACTGTGTACTGGATCTaGTGGTCTCCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: EQGHRHHQGDIALFVHAMTVYWI*WSPSGK
Trigger: CTTTCCAGAAGGAGACCACAAGATCCAGTACACAGT...CATGGCATGGACAAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CAA 90 bp CCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGCTTGTCCAAGCCAGGTTGGATaGACATACTCGGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PREEPSCQVLQVWLISACPSQVG*TYSGRA
Trigger: AGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTGG...ACAAGCCGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CAA 90 bp GTCAATCAGGTTGAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTTCTGACACCCACATaGACGTTCATGGCTGCACAG +
Preference number: 5 (lower is better)
Translates to: VNQVEQGHRHHQGDIALFVLTPT*TFMAAQ
Trigger: CTGTGCAGCCATGAACGTCAATGTGGGTGTCAGAAC...AAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTCAACCTGATTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS TCA 90 bp GCTGGAGCCGGTAAAGGAGGTTTCGGGCTGTGGGTGTGGACACAATaGGGAGTCTCCTTTTCTCATAAAACTGATCCAGAAGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: AGAGKGGFGLWVWTQ*GVSFSHKTDPEVQL
Trigger: CAGCTGCACTTCTGGATCAGTTTTATGAGAAAAGGAGACTCCTCATTGTGTCCACACCCACAGCCCGAAACCTCCTTTACCGGCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000479015.1
ENST00000538295.5
ENST00000544439.5
CDS CCA 90 bp CCGGACTGTCAGTTTGTTGGGTTCTGCAATGCGTTCCTTCACACTTaGGCACTTGATTCTAGGAGGTTCCATATCCACACAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PDCQFVGFCNAFLHT*ALDSRRFHIHTGGW
Trigger: CCAGCCTCCTGTGTGGATATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GAACAGGGCCACAGGCATCACCAGGGAGACATAGCGCTCTTTGTCCATGCCATGTTCACACTTGGGCACTaGATTCTAGGAGGTTCCATA +
Preference number: 5 (lower is better)
Translates to: EQGHRHHQGDIALFVHAMFTLGH*ILGGSI
Trigger: TATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAA...CATGGCATGGACAAAGAGCGCTATGTCTCCCTGGTGATGCCTGTGGCCCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS TCA 90 bp CATAGCGCTCTTTGTCCATGCCATGCTTATCCACTAGCACCATACTaGAGGAGTAGAGTGGGATTCGCAGCAACAGCCTGCAGCATTCCT +
Preference number: 5 (lower is better)
Translates to: HSALCPCHAYPLAPY*RSRVGFAATACSIP
Trigger: AGGAATGCTGCAGGCTGTTGCTGCGAATCCCACTCTACTCCTTCAGTATGGTGCTAGTGGATAAGCATGGCATGGACAAAGAGCGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479015.1
ENST00000538295.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATCCCCATACTTCACCTaGATGGGGGAGCACCACGGG +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRSPYFT*MGEHHG
Trigger: CCCGTGGTGCTCCCCCATCAAGGTGAAGTATGGGGA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACGGCCGCTCCAGGCCTaGTTGTCCATACATGTGACG +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRRPLQA*LSIHVT
Trigger: CGTCACATGTATGGACAACAAGGCCTGGAGCGGCCG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS GCA 90 bp AATGAGGAGTCTCCTTTTCTCATAAAACTGATCCAGAAGTGCAGCTaGCGTTCTGACACCCACATTGACGTTCATGGCTGCACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: NEESPFLIKLIQKCS*RSDTHIDVHGCTGG
Trigger: CCCACCTGTGCAGCCATGAACGTCAATGTGGGTGTCAGAACGGCAGCTGCACTTCTGGATCAGTTTTATGAGAAAAGGAGACTCCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000479015.1
ENST00000538295.5
ENST00000544439.5
CDS TCA 90 bp GTCCATACATGTGACGGTCCGCTCCCCTTTCAACGTGTATCCTGGTaGACAATAATACTCACACCGGGAGTTAAAGTAGGCACCATCTAC +
Preference number: 5 (lower is better)
Translates to: VHTCDGPLPFQRVSW*TIILTPGVKVGTIY
Trigger: GTAGATGGTGCCTACTTTAACTCCCGGTGTGAGTATTATTGTTCACCAGGATACACGTTGAAAGGGGAGCGGACCGTCACATGTATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS TCA 90 bp CATAGCGCTCTTTGTCCATGCCATGCTTATCCACTAGCACCATACTaGAGGAGTAGAGTGGGATTCGCAGCAACAGCCTTTTGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: HSALCPCHAYPLAPY*RSRVGFAATAFWLL
Trigger: CAACAACCAAAAGGCTGTTGCTGCGAATCCCACTCTACTCCTTCAGTATGGTGCTAGTGGATAAGCATGGCATGGACAAAGAGCGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461865.1
CDS GCA 90 bp CCGGGAGTTAAAGTAGGCACCATCTACACACTTAAACCCTCCATTTaGTGGCATGGCAAGGGTAGGACATCGCTTTTGTTTGCAGATGAC +
Preference number: 5 (lower is better)
Translates to: PGVKVGTIYTLKPSI*WHGKGRTSLLFADD
Trigger: GTCATCTGCAAACAAAAGCGATGTCCTACCCTTGCCATGCCAGCAAATGGAGGGTTTAAGTGTGTAGATGGTGCCTACTTTAACTCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS GCA 90 bp GGACACAATGAGGAGTCTCCTTTTCTCATAAAACTGATCCAGAAGTaGAGCTGCCGTTCTGACACCCACATTGACGTTCATGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: GHNEESPFLIKLIQK*SCRSDTHIDVHGCT
Trigger: TGTGCAGCCATGAACGTCAATGTGGGTGTCAGAACGGCAGCTGCACTTCTGGATCAGTTTTATGAGAAAAGGAGACTCCTCATTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000479015.1
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCTCTGGGGCATTGAGTTaGCCACAGCGTTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: GIAKRGTIMSGVTGLAHFSGALS*PQRLTL
Trigger: AAGAGTCAAACGCTGTGGCAAACTCAATGCCCCAGA...GAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS GCA 90 bp ACTAAAATCCATGGCTCCAACTTTGTAAGGGTTATGAAACTGAGCTaGAGCGCTAGGGCTGGAGGCATAATCTTTGCTCCTATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: TKIHGSNFVRVMKLS*SARAGGIIFAPILP
Trigger: TGGCAGGATAGGAGCAAAGATTATGCCTCCAGCCCTAGCGCTGCAGCTCAGTTTCATAACCCTTACAAAGTTGGAGCCATGGATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461865.1
CDS CCA 90 bp CCGGACTGTCAGTTTGTTGGGTTCTGCAATGCGTTCCTTCACACTTaGGCACTTGATTCTAGGAGGTTCCATATGTTTGCAGATGACCTT +
Preference number: 5 (lower is better)
Translates to: PDCQFVGFCNAFLHT*ALDSRRFHMFADDL
Trigger: AAGGTCATCTGCAAACATATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432886.6
CDS-3UTR CAA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATTCCCCATACTTCACCTaGATGGGGGAGCACCACGGG +
Preference number: 5 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDSPYFT*MGEHHG
Trigger: CCCGTGGTGCTCCCCCATCAAGGTGAAGTATGGGGA...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGGACATCGCTTTTGTTaGCAGATGACCTTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: ELPREEPSCQVLQVWLISGHRFC*QMTLSD
Trigger: GTCTGACAAGGTCATCTGCAAACAAAAGCGATGTCC...CGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CAA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCGGCCGCTCCAGGCCTaGTTGTCCATACATGTGACG +
Preference number: 5 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDRPLQA*LSIHVT
Trigger: CGTCACATGTATGGACAACAAGGCCTGGAGCGGCCG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCGGCCGCTCCAGGCCTaGTTGTCCATACATGTGACG +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELRPLQA*LSIHVT
Trigger: CGTCACATGTATGGACAACAAGGCCTGGAGCGGCCG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACGGACTGTCAGTTTGTaGGGTTCTGCAATGCGTTCC +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRRTVSL*GSAMRS
Trigger: GGAACGCATTGCAGAACCCAACAAACTGACAGTCCG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAACCCGGACTGTCAGTTaGTTGGGTTCTGCAATGCGT +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRTRTVS*LGSAMR
Trigger: ACGCATTGCAGAACCCAACAAACTGACAGTCCGGGT...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACCATTCTCTGGGGCATaGAGTTTGCCACAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRPFSGA*SLPQRL
Trigger: CAAACGCTGTGGCAAACTCAATGCCCCAGAGAATGG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAGTTCTGACACCCACATaGACGTTCATGGCTGCACAG +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRVLTPT*TFMAAQ
Trigger: CTGTGCAGCCATGAACGTCAATGTGGGTGTCAGAAC...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCTCCCCATACTTCACCTaGATGGGGGAGCACCACGGG +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSSPYFT*MGEHHG
Trigger: CCCGTGGTGCTCCCCCATCAAGGTGAAGTATGGGGA...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGACAGACCATCGTTTGTTaGACTGGCAGATCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRQTIVC*TGRSVG
Trigger: CCCTACTGATCTGCCAGTCAAACAAACGATGGTCTG...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp TTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGCTTGTTTGCAGATGACCTaGTCAGACCATCGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: LPREEPSCQVLQVWLISACLQMT*SDHRLF
Trigger: AAACAAACGATGGTCTGACAAGGTCATCTGCAAACA...AGCCGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCGCTCCAGGCCTTGTaGTCCATACATGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELPLQAL*SIHVTV
Trigger: GACCGTCACATGTATGGACAACAAGGCCTGGAGCGG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCCAAGCCAGGTTGGATaGACATACTCGGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDPSQVG*TYSGRA
Trigger: AGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTGG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GAATTGCCAAGAGAGGAACCATCATGTCAGGTGTTACAGGTCTGGCTCATTTCGGACAATGAAGAGGAATaGCCAAGAGAGGAACCATCA +
Preference number: 5 (lower is better)
Translates to: ELPREEPSCQVLQVWLISDNEEE*PREEPS
Trigger: TGATGGTTCCTCTCTTGGCAATTCCTCTTCATTGTC...CGAAATGAGCCAGACCTGTAACACCTGACATGATGGTTCCTCTCTTGGCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538295.5
CDS CCA 90 bp TCCATAATTATCACCGTCGCTGGAGCACTTCATGTAACCATTCTCTaGGGCATTGAGTTTGCCACAGCGTTTGACTCTTACTTTAACTCG +
Preference number: 5 (lower is better)
Translates to: SIIITVAGALHVTIL*GIEFATAFDSYFNS
Trigger: CGAGTTAAAGTAAGAGTCAAACGCTGTGGCAAACTCAATGCCCCAGAGAATGGTTACATGAAGTGCTCCAGCGACGGTGATAATTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAGGTAGGACATCGCTTTaGTTTGCAGATGACCTTGTC +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRGRTSL*FADDLV
Trigger: GACAAGGTCATCTGCAAACAAAAGCGATGTCCTACC...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCCGCTCCAGGCCTTGTaGTCCATACATGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIPLQAL*SIHVTV
Trigger: GACCGTCACATGTATGGACAACAAGGCCTGGAGCGG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCCGCTCCAGGCCTTGTaGTCCATACATGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSPLQAL*SIHVTV
Trigger: GACCGTCACATGTATGGACAACAAGGCCTGGAGCGG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAACTGTGTACTGGATCTaGTGGTCTCCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRTVYWI*WSPSGK
Trigger: CTTTCCAGAAGGAGACCACAAGATCCAGTACACAGT...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCCCAAGCCAGGTTGGATaGACATACTCGGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSPSQVG*TYSGRA
Trigger: AGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTGG...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGTTTGTAGTATCCTCCTaGAGGGGCCCTGCAGTACAC +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELFVVSS*RGPAVH
Trigger: GTGTACTGCAGGGCCCCTCAAGGAGGATACTACAAA...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATTGTCAGACCATCGTTaGTTTGACTGGCAGATCAGT +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRLSDHR*FDWQIS
Trigger: ACTGATCTGCCAGTCAAACAAACGATGGTCTGACAA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATTCACACTTGGGCACTaGATTCTAGGAGGTTCCATA +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRFTLGH*ILGGSI
Trigger: TATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCGGACTGTCAGTTTGTaGGGTTCTGCAATGCGTTCC +
Preference number: 5 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDRTVSL*GSAMRS
Trigger: GGAACGCATTGCAGAACCCAACAAACTGACAGTCCG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCGGACTGTCAGTTTGTaGGGTTCTGCAATGCGTTCC +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELRTVSL*GSAMRS
Trigger: GGAACGCATTGCAGAACCCAACAAACTGACAGTCCG...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCCATTCTCTGGGGCATaGAGTTTGCCACAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDPFSGA*SLPQRL
Trigger: CAAACGCTGTGGCAAACTCAATGCCCCAGAGAATGG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGGTTCTGACACCCACATaGACGTTCATGGCTGCACAG +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELVLTPT*TFMAAQ
Trigger: CTGTGCAGCCATGAACGTCAATGTGGGTGTCAGAAC...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATCAGACCATCGTTTGTTaGACTGGCAGATCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDQTIVC*TGRSVG
Trigger: CCCTACTGATCTGCCAGTCAAACAAACGATGGTCTG...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGATGTTTGCAGATGACCTaGTCAGACCATCGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRCLQMT*SDHRLF
Trigger: AAACAAACGATGGTCTGACAAGGTCATCTGCAAACA...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCGGACTGTCAGTTTGTaGGGTTCTGCAATGCGTTCC +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIRTVSL*GSAMRS
Trigger: GGAACGCATTGCAGAACCCAACAAACTGACAGTCCG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTACCCGGACTGTCAGTTaGTTGGGTTCTGCAATGCGT +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLITRTVS*LGSAMR
Trigger: ACGCATTGCAGAACCCAACAAACTGACAGTCCGGGT...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGTCTGGGGCATTGAGTTaGCCACAGCGTTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELSGALS*PQRLTL
Trigger: AAGAGTCAAACGCTGTGGCAAACTCAATGCCCCAGA...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCCATTCTCTGGGGCATaGAGTTTGCCACAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIPFSGA*SLPQRL
Trigger: CAAACGCTGTGGCAAACTCAATGCCCCAGAGAATGG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTCAGACCATCGTTTGTTaGACTGGCAGATCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIQTIVC*TGRSVG
Trigger: CCCTACTGATCTGCCAGTCAAACAAACGATGGTCTG...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGGGACATCGCTTTTGTTaGCAGATGACCTTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELGHRFC*QMTLSD
Trigger: GTCTGACAAGGTCATCTGCAAACAAAAGCGATGTCC...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGACTGTGTACTGGATCTaGTGGTCTCCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELTVYWI*WSPSGK
Trigger: CTTTCCAGAAGGAGACCACAAGATCCAGTACACAGT...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTGGGGCATTGAGTTaGCCACAGCGTTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLISGALS*PQRLTL
Trigger: AAGAGTCAAACGCTGTGGCAAACTCAATGCCCCAGA...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCTCTGGGGCATTGAGTTaGCCACAGCGTTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSSGALS*PQRLTL
Trigger: AAGAGTCAAACGCTGTGGCAAACTCAATGCCCCAGA...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGGACATCGCTTTTGTTaGCAGATGACCTTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIGHRFC*QMTLSD
Trigger: GTCTGACAAGGTCATCTGCAAACAAAAGCGATGTCC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGGTAGGACATCGCTTTaGTTTGCAGATGACCTTGTC +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIGRTSL*FADDLV
Trigger: GACAAGGTCATCTGCAAACAAAAGCGATGTCCTACC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCACTGTGTACTGGATCTaGTGGTCTCCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSTVYWI*WSPSGK
Trigger: CTTTCCAGAAGGAGACCACAAGATCCAGTACACAGT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGCCAAGAACTTTAACTCGAAATTaGCAAGTGCCCTTATTCTCA +
Preference number: 5 (lower is better)
Translates to: KAFPCACHYVDNEEELPRTLTRN*QVPLFS
Trigger: TGAGAATAAGGGCACTTGCAAATTTCGAGTTAAAGT...TCTTGGCAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCGGAGGTTCCATATGTTaGCAGATGACCTTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSGGSIC*QMTLSD
Trigger: GTCTGACAAGGTCATCTGCAAACATATGGAACCTCC...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432886.6
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCTTGTCAGACCATCGTTaGTTTGACTGGCAGATCAGT +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSLSDHR*FDWQIS
Trigger: ACTGATCTGCCAGTCAAACAAACGATGGTCTGACAA...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTTGTCAGACCATCGTTaGTTTGACTGGCAGATCAGT +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLILSDHR*FDWQIS
Trigger: ACTGATCTGCCAGTCAAACAAACGATGGTCTGACAA...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTTCACACTTGGGCACTaGATTCTAGGAGGTTCCATA +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIFTLGH*ILGGSI
Trigger: TATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAA...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCGACAATGAAGAGGAATaGCCAAGAGAGGAACCATCA +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSDNEEE*PREEPS
Trigger: TGATGGTTCCTCTCTTGGCAATTCCTCTTCATTGTC...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCTGTTTGCAGATGACCTaGTCAGACCATCGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSCLQMT*SDHRLF
Trigger: AAACAAACGATGGTCTGACAAGGTCATCTGCAAACA...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp AGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCAGCCATGATGAGTTAGGTGTCACATaGAATAACATGTTGATAGCC +
Preference number: 5 (lower is better)
Translates to: SLCMVMGSNFSTKSSSHDELGVT*NNMLIA
Trigger: GGCTATCAACATGTTATTCAATGTGACACCTAACTC...ATCATGGCTGCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp ATTTTTAAGGCTTTCCCGTGTGCATGTCACTATGTAGACAATGAAGAGGAATTGGAGTTAGGTGTCACATaGAATAACATGTTGATAGCC +
Preference number: 5 (lower is better)
Translates to: IFKAFPCACHYVDNEEELELGVT*NNMLIA
Trigger: GGCTATCAACATGTTATTCAATGTGACACCTAACTC...CAATTCCTCTTCATTGTCTACATAGTGACATGCACACGGGAAAGCCTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCGAGTTAGGTGTCACATaGAATAACATGTTGATAGCC +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSELGVT*NNMLIA
Trigger: GGCTATCAACATGTTATTCAATGTGACACCTAACTC...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTGAGTTAGGTGTCACATaGAATAACATGTTGATAGCC +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLIELGVT*NNMLIA
Trigger: GGCTATCAACATGTTATTCAATGTGACACCTAACTC...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp GGTGTCACATTGAATAACATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTACTTTAACTCGAAATTaGCAAGTGCCCTTATTCTCA +
Preference number: 5 (lower is better)
Translates to: GVTLNNMLIACVWLWVLITLTRN*QVPLFS
Trigger: TGAGAATAAGGGCACTTGCAAATTTCGAGTTAAAGT...AATTAGAACCCATAACCATACACAGGCTATCAACATGTTATTCAATGTGACACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS-3UTR CAA 90 bp CATGTTGATAGCCTGTGTATGGTTATGGGTTCTAATTTCTCTACAAAATCAAGCACTTTAACTCGAAATTaGCAAGTGCCCTTATTCTCA +
Preference number: 5 (lower is better)
Translates to: HVDSLCMVMGSNFSTKSSTLTRN*QVPLFS
Trigger: TGAGAATAAGGGCACTTGCAAATTTCGAGTTAAAGT...GCTTGATTTTGTAGAGAAATTAGAACCCATAACCATACACAGGCTATCAACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS GCA 72 bp CCCGGGGGCGGCAGGAGACCGAAGAGACCAAGGGACTaGGTGCTAGCGGGCGGGCGAAGGCCGGGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: PGGGRRPKRPRD*VLAGGRRPGWK
Trigger: TTTCCAGCCCGGCCTTCGCCCGCCCGCTAGCACGCAGTCCCTTGGTCTCTTCGGTCTCCTGCCGCCCCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CAA 90 bp CATGGCTGCACAGGTGGGCTCCGTGCCAGACCAAGCCAGGTTGGATaGACATACTCGGGCAGGGCTACCCTGGAGCTCATAGCCGCCGAT +
Preference number: 6 (lower is better)
Translates to: HGCTGGLRARPSQVG*TYSGRATLELIAAD
Trigger: ATCGGCGGCTATGAGCTCCAGGGTAGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTGGTCTGGCACGGAGCCCACCTGTGCAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS TCA 72 bp CTGGCCGGCCGCTCCAGGCCTTGTTGTCCATACATGTaGCGGTCCGCTCCCCTTTCAACGTGTATCCTGGTG +
Preference number: 6 (lower is better)
Translates to: LAGRSRPCCPYM*RSAPLSTCILV
Trigger: CACCAGGATACACGTTGAAAGGGGAGCGGACCGTCACATGTATGGACAACAAGGCCTGGAGCGGCCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS CAA 72 bp ACAGGTGGGCTCCGTGCCAGACCAAGCCAGGTTGGATaGACATACTCGGGCAGGGCTACCCTGGAGCTCATA +
Preference number: 6 (lower is better)
Translates to: TGGLRARPSQVG*TYSGRATLELI
Trigger: TATGAGCTCCAGGGTAGCCCTGCCCGAGTATGTCAATCCAACCTGGCTTGGTCTGGCACGGAGCCCACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000479015.1
ENST00000538295.5
ENST00000544439.5
CDS CCA 72 bp GCAGCTCGTAGCCCTTCTGGCAGCGAATGTCGCACCTaGTTCCCAGGGCTGTTTTGTAGTATCCTCCTTGAG +
Preference number: 6 (lower is better)
Translates to: AARSPSGSECRT*FPGLFCSILLE
Trigger: CTCAAGGAGGATACTACAAAACAGCCCTGGGAACCAGGTGCGACATTCGCTGCCAGAAGGGCTACGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CCA 72 bp CGGGTGTCTCCCAGGACACCCGGACTGTCAGTTTGTTaGGTTCTGCAATGCGTTCCTTCACACTTGGGCACT +
Preference number: 6 (lower is better)
Translates to: RVSPRTPGLSVC*VLQCVPSHLGT
Trigger: AGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGGGTGTCCTGGGAGACACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CAA 72 bp TCGGGTGTCTCCCAGGACACCCGGACTGTCAGTTTGTaGGGTTCTGCAATGCGTTCCTTCACACTTGGGCAC +
Preference number: 6 (lower is better)
Translates to: SGVSQDTRTVSL*GSAMRSFTLGH
Trigger: GTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGGGTGTCCTGGGAGACACCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CAA 72 bp CCTTCGGGTGTCTCCCAGGACACCCGGACTGTCAGTTaGTTGGGTTCTGCAATGCGTTCCTTCACACTTGGG +
Preference number: 6 (lower is better)
Translates to: PSGVSQDTRTVS*LGSAMRSFTLG
Trigger: CCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGGGTGTCCTGGGAGACACCCGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CCA 72 bp CTTGATTCTAGGAGGTTCCATATCCACACAGGAGGCTaGCCGGCCGCTCCAGGCCTTGTTGTCCATACATGT +
Preference number: 6 (lower is better)
Translates to: LDSRRFHIHTGG*PAAPGLVVHTC
Trigger: ACATGTATGGACAACAAGGCCTGGAGCGGCCGGCCAGCCTCCTGTGTGGATATGGAACCTCCTAGAATCAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS CCA 72 bp GGAGCTCATAGCCGCCGATGCAGGAGAACTCACAGGTaGCTCCATAATTATCACCGTCGCTGGAGCACTTCA +
Preference number: 6 (lower is better)
Translates to: GAHSRRCRRTHR*LHNYHRRWSTS
Trigger: TGAAGTGCTCCAGCGACGGTGATAATTATGGAGCCACCTGTGAGTTCTCCTGCATCGGCGGCTATGAGCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CAA 90 bp GTGTCTCTTCCTTCGGGTGTCTCCCAGGACACCCGGACTGTCAGTTaGTTGGGTTCTGCAATGCGTTCCTTCACACTTGGGCACTTGATT +
Preference number: 6 (lower is better)
Translates to: VSLPSGVSQDTRTVS*LGSAMRSFTLGHLI
Trigger: AATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGGGTGTCCTGGGAGACACCCGAAGGAAGAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS GCA 72 bp CTCCCAGGACACCCGGACTGTCAGTTTGTTGGGTTCTaGAATGCGTTCCTTCACACTTGGGCACTTGATTCT +
Preference number: 6 (lower is better)
Translates to: LPGHPDCQFVGF*NAFLHTWALDS
Trigger: AGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGGGTGTCCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CAA 90 bp TCTCTTCCTTCGGGTGTCTCCCAGGACACCCGGACTGTCAGTTTGTaGGGTTCTGCAATGCGTTCCTTCACACTTGGGCACTTGATTCTA +
Preference number: 6 (lower is better)
Translates to: SLPSGVSQDTRTVSL*GSAMRSFTLGHLIL
Trigger: TAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGACAGTCCGGGTGTCCTGGGAGACACCCGAAGGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS TCA 72 bp CTTTGTCCATGCCATGCTTATCCACTAGCACCATACTaGAGGAGTAGAGTGGGATTCGCAGCAACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: LCPCHAYPLAPY*RSRVGFAATAC
Trigger: GCAGGCTGTTGCTGCGAATCCCACTCTACTCCTTCAGTATGGTGCTAGTGGATAAGCATGGCATGGACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479015.1
ENST00000538295.5
CDS TCA 72 bp TGTGACGGTCCGCTCCCCTTTCAACGTGTATCCTGGTaGACAATAATACTCACACCGGGAGTTAAAGTAGGC +
Preference number: 6 (lower is better)
Translates to: CDGPLPFQRVSW*TIILTPGVKVG
Trigger: GCCTACTTTAACTCCCGGTGTGAGTATTATTGTTCACCAGGATACACGTTGAAAGGGGAGCGGACCGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS GCA 72 bp CATGGCTCCAACTTTGTAAGGGTTATGAAACTGAGCTaGAGCGCTAGGGCTGGAGGCATAATCTTTGCTCCT +
Preference number: 6 (lower is better)
Translates to: HGSNFVRVMKLS*SARAGGIIFAP
Trigger: AGGAGCAAAGATTATGCCTCCAGCCCTAGCGCTGCAGCTCAGTTTCATAACCCTTACAAAGTTGGAGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461865.1
CDS CCA 72 bp ATCACCGTCGCTGGAGCACTTCATGTAACCATTCTCTaGGGCATTGAGTTTGCCACAGCGTTTGACTCTTAC +
Preference number: 6 (lower is better)
Translates to: ITVAGALHVTIL*GIEFATAFDSY
Trigger: GTAAGAGTCAAACGCTGTGGCAAACTCAATGCCCCAGAGAATGGTTACATGAAGTGCTCCAGCGACGGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000538295.5
ENST00000544439.5
CDS CAA 72 bp TTGGGTTCTGCAATGCGTTCCTTCACACTTGGGCACTaGATTCTAGGAGGTTCCATATCCACACAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: LGSAMRSFTLGH*ILGGSISTQEA
Trigger: AGCCTCCTGTGTGGATATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS TCA 72 bp CTTTGTCCATGCCATGCTTATCCACTAGCACCATACTaGAGGAGTAGAGTGGGATTCGCAGCAACAGCCTTT +
Preference number: 6 (lower is better)
Translates to: LCPCHAYPLAPY*RSRVGFAATAF
Trigger: AAAGGCTGTTGCTGCGAATCCCACTCTACTCCTTCAGTATGGTGCTAGTGGATAAGCATGGCATGGACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461865.1
CDS GCA 72 bp TCTCCTTTTCTCATAAAACTGATCCAGAAGTGCAGCTaGCGTTCTGACACCCACATTGACGTTCATGGCTGC +
Preference number: 6 (lower is better)
Translates to: SPFLIKLIQKCS*RSDTHIDVHGC
Trigger: GCAGCCATGAACGTCAATGTGGGTGTCAGAACGGCAGCTGCACTTCTGGATCAGTTTTATGAGAAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000479015.1
ENST00000538295.5
ENST00000544439.5
CDS CAA 72 bp CGCTTTTGTTTGCAGATGACCTTGTCAGACCATCGTTaGTTTGACTGGCAGATCAGTAGGGAAGAGCCATGC +
Preference number: 6 (lower is better)
Translates to: RFCLQMTLSDHR*FDWQISREEPC
Trigger: GCATGGCTCTTCCCTACTGATCTGCCAGTCAAACAAACGATGGTCTGACAAGGTCATCTGCAAACAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS CAA 90 bp GTCAGTTTGTTGGGTTCTGCAATGCGTTCCTTCACACTTGGGCACTaGATTCTAGGAGGTTCCATATGTTTGCAGATGACCTTGTCAGAC +
Preference number: 6 (lower is better)
Translates to: VSLLGSAMRSFTLGH*ILGGSICLQMTLSD
Trigger: GTCTGACAAGGTCATCTGCAAACATATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432886.6
CDS TCA 72 bp GGTAAAGGAGGTTTCGGGCTGTGGGTGTGGACACAATaGGGAGTCTCCTTTTCTCATAAAACTGATCCAGAA +
Preference number: 6 (lower is better)
Translates to: GKGGFGLWVWTQ*GVSFSHKTDPE
Trigger: TTCTGGATCAGTTTTATGAGAAAAGGAGACTCCTCATTGTGTCCACACCCACAGCCCGAAACCTCCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000479015.1
ENST00000538295.5
ENST00000544439.5
CDS GCA 72 bp GAGGAGTCTCCTTTTCTCATAAAACTGATCCAGAAGTaGAGCTGCCGTTCTGACACCCACATTGACGTTCAT +
Preference number: 6 (lower is better)
Translates to: EESPFLIKLIQK*SCRSDTHIDVH
Trigger: ATGAACGTCAATGTGGGTGTCAGAACGGCAGCTGCACTTCTGGATCAGTTTTATGAGAAAAGGAGACTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378533.4
ENST00000432886.6
ENST00000479015.1
ENST00000538295.5
ENST00000544439.5
CDS CCA 72 bp CAGTTTGTTGGGTTCTGCAATGCGTTCCTTCACACTTaGGCACTTGATTCTAGGAGGTTCCATATCCACACA +
Preference number: 6 (lower is better)
Translates to: QFVGFCNAFLHT*ALDSRRFHIHT
Trigger: TGTGTGGATATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS CAA 72 bp GCAAGGGTAGGACATCGCTTTTGTTTGCAGATGACCTaGTCAGACCATCGTTTGTTTGACTGGCAGATCAGT +
Preference number: 6 (lower is better)
Translates to: ARVGHRFCLQMT*SDHRLFDWQIS
Trigger: ACTGATCTGCCAGTCAAACAAACGATGGTCTGACAAGGTCATCTGCAAACAAAAGCGATGTCCTACCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS CAA 72 bp TCCATATGTTTGCAGATGACCTTGTCAGACCATCGTTaGTTTGACTGGCAGATCAGTAGGGAAGAGCCATGC +
Preference number: 6 (lower is better)
Translates to: SICLQMTLSDHR*FDWQISREEPC
Trigger: GCATGGCTCTTCCCTACTGATCTGCCAGTCAAACAAACGATGGTCTGACAAGGTCATCTGCAAACATATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432886.6
CDS CAA 72 bp TTGGGTTCTGCAATGCGTTCCTTCACACTTGGGCACTaGATTCTAGGAGGTTCCATATGTTTGCAGATGACC +
Preference number: 6 (lower is better)
Translates to: LGSAMRSFTLGH*ILGGSICLQMT
Trigger: GGTCATCTGCAAACATATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432886.6
CDS GCA 72 bp AAAGTAGGCACCATCTACACACTTAAACCCTCCATTTaGTGGCATGGCAAGGGTAGGACATCGCTTTTGTTT +
Preference number: 6 (lower is better)
Translates to: KVGTIYTLKPSI*WHGKGRTSLLF
Trigger: AAACAAAAGCGATGTCCTACCCTTGCCATGCCAGCAAATGGAGGGTTTAAGTGTGTAGATGGTGCCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378533.4
ENST00000538295.5
ENST00000544439.5
CDS CCA 72 bp CAGTTTGTTGGGTTCTGCAATGCGTTCCTTCACACTTaGGCACTTGATTCTAGGAGGTTCCATATGTTTGCA +
Preference number: 6 (lower is better)
Translates to: QFVGFCNAFLHT*ALDSRRFHMFA
Trigger: TGCAAACATATGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCAGAACCCAACAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432886.6
CDS CAA 72 bp TTGATTCTAGGAGGTTCCATATGTTTGCAGATGACCTaGTCAGACCATCGTTTGTTTGACTGGCAGATCAGT +
Preference number: 6 (lower is better)
Translates to: LILGGSICLQMT*SDHRLFDWQIS
Trigger: ACTGATCTGCCAGTCAAACAAACGATGGTCTGACAAGGTCATCTGCAAACATATGGAACCTCCTAGAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432886.6