RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRPRA (Homo sapiens)

Ensembl gene IDs: ENSG00000182934

Ensembl transcript IDs: ENST00000332118.11, ENST00000527817.1, ENST00000528744.5, ENST00000530680.1, ENST00000531104.1, ENST00000532259.1, ENST00000532268.1

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATACACTGCCACAGTGAGGCGGGTGTCATCCAGGTCCTGGGGACCTaGAGGCTGTGTATCCTAGGGAGAGGTGCCATTCAAGACCTGGCG +
Preference number: 1 (lower is better)
Translates to: IHCHSEAGVIQVLGT*RLCILGRGAIQDLA
Trigger: CGCCAGGTCTTGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCCAGGACCTGGATGACACCCGCCTCACTGTGGCAGTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR CCA 90 bp ATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGGGGAGTaGGGTTGGAAGGAGCCACAAGCCCCCTCACTCTGCCTTTGTACT +
Preference number: 1 (lower is better)
Translates to: MIRPSLQMAAVLNGE*GWKEPQAPSLCLCT
Trigger: AGTACAAAGGCAGAGTGAGGGGGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR GCA 90 bp TCTGGATTCTGGGAGTGGGAAGAGTTGGGAGGCCAAGAAGCCCAATaGAACGCTGCAGCTGAGCTCCTTTTATTTCTGAGGGAAGCAAGG +
Preference number: 1 (lower is better)
Translates to: SGFWEWEELGGQEAQ*NAAAELLLFLREAR
Trigger: CCTTGCTTCCCTCAGAAATAAAAGGAGCTCAGCTGCAGCGTTGCATTGGGCTTCTTGGCCTCCCAACTCTTCCCACTCCCAGAATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR TCA 90 bp GTGGGAAGAGTTGGGAGGCCAAGAAGCCCAATGCAACGCTGCAGCTaGGCTCCTTTTATTTCTGAGGGAAGCAAGGACTCATCTTTTGCT +
Preference number: 1 (lower is better)
Translates to: VGRVGRPRSPMQRCS*APFISEGSKDSSFA
Trigger: AGCAAAAGATGAGTCCTTGCTTCCCTCAGAAATAAAAGGAGCTCAGCTGCAGCGTTGCATTGGGCTTCTTGGCCTCCCAACTCTTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR GCA 90 bp TCATACATCCTTCTGACAATTGGTTTCCTCCCAGGAAGGGGAACATaGAGAGCTTACTTCTGGATTCTGGGAGTGGGAAGAGTTGGGAGG +
Preference number: 1 (lower is better)
Translates to: SYILLTIGFLPGRGT*RAYFWILGVGRVGR
Trigger: CCTCCCAACTCTTCCCACTCCCAGAATCCAGAAGTAAGCTCTGCATGTTCCCCTTCCTGGGAGGAAACCAATTGTCAGAAGGATGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR GCA 90 bp CCACAAGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTaGTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCT +
Preference number: 1 (lower is better)
Translates to: PQAPSLCLCTTLKTG*SHTLKHILDTGRRA
Trigger: AGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR TCA 90 bp TACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTaGTACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATT +
Preference number: 1 (lower is better)
Translates to: YYTEDRLLTYSKAHS*YRKKGLWGKRRFGI
Trigger: AATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR TCA 90 bp AGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTAGCTaGTGCTTTGGGGTAAACAATGGAGTAGGAGTCATCATCAGAATT +
Preference number: 1 (lower is better)
Translates to: RTHLLLICNKSLQPS*CFGVNNGVGVIIRI
Trigger: AATTCTGATGATGACTCCTACTCCATTGTTTACCCCAAAGCATCAGCTAGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR GCA 90 bp TTATATAAATTACTTATTTCTCTGGGCAGACAGCCTTCACCTTATTaGACTAATAGCACATCTGTAATATCAAGCTACAGGACAAGTCTT +
Preference number: 1 (lower is better)
Translates to: LYKLLISLGRQPSPY*TNSTSVISSYRTSL
Trigger: AAGACTTGTCCTGTAGCTTGATATTACAGATGTGCTATTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATAAGTAATTTATATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR-3UTR CCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGGGGAAAGCGGCGATTTaGTATTGGGCAAGAGCCACG +
Preference number: 2 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMGKAAI*YWARAT
Trigger: CGTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCC...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR CAA 90 bp GGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTaGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: GRGSVGSDCNMIRPS*QMAAVLNGEWGWKE
Trigger: CTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR GCA 90 bp AGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGCAAGCCCCCTCACTCTaGCTTTGTACTACACTGAAG +
Preference number: 2 (lower is better)
Translates to: RPSLQMAAVLNGEWGWKEQAPSL*LCTTLK
Trigger: CTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTG...CTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR CCA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCAACGGGGAGTGGGGTTaGAAGGAGCCACAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLNGEWG*KEPQAP
Trigger: GGGGGCTTGTGGCTCCTTCCAACCCCACTCCCCGTT...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR TCA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGAGATGGCGGCTGTGCTaGACGGGGAGTGGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTERWRLC*TGSGVG
Trigger: TCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCT...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR CCA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGAACGGGGAGTGGGGTTaGAAGGAGCCACAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: GLIRLRRLLTTLIISKALNGEWG*KEPQAP
Trigger: GGGGGCTTGTGGCTCCTTCCAACCCCACTCCCCGTT...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR CCA 90 bp TTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGCGGGTGTCATCCAGGTTCAAGACCTGGCGCTaGCTCTGGAAGAGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: LAAINRQYTATVRRVSSRFKTWR*LWKSLL
Trigger: TAAGAGACTCTTCCAGAGCCAGCGCCAGGTCTTGAA...CCTGGATGACACCCGCCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR-3UTR CCA 90 bp AACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTAGGAAGAAGGGCTTGTaGGGAAAGCGGCGATTTGGT +
Preference number: 2 (lower is better)
Translates to: NLMQLGLIRLRRLLTTLIRKKGL*GKRRFG
Trigger: ACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCT...AATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR CCA 90 bp GGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTAGCTGGGAAAGCGGCGATTTaGTATTGGGCAAGAGCCACG +
Preference number: 2 (lower is better)
Translates to: GKQGLIFCSFVTNHSSLAGKAAI*YWARAT
Trigger: CGTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCC...AGCTAGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR-3UTR GCA 90 bp GAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTGAAGACAGGTTaGTCACATACTCTAAAGCAC +
Preference number: 2 (lower is better)
Translates to: ESLNLMQLGLIRLRRLLTTLKTG*SHTLKH
Trigger: GTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGT...GGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR GCA 90 bp CTGAGGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTTATCCTAGGGAGAGGTaGCATTCAAGACCTGGCGCT +
Preference number: 2 (lower is better)
Translates to: LREARTHLLLICNKSLQPYPRER*HSRPGA
Trigger: AGCGCCAGGTCTTGAATGGCACCTCTCCCTAGGATA...AGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR CAA 90 bp TCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTaGACCACACTAATTATTAGCAAAGCTCTGGTGTTGGGTTCCAAC +
Preference number: 2 (lower is better)
Translates to: SLNLMQLGLIRLRRL*TTLIISKALVLGSN
Trigger: GTTGGAACCCAACACCAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR TCA 90 bp ATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGGTGCCTGCAGTGATTGTAACATaGTTAGGCCTTCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: IGQSCNKTESVGRVKGVPAVIVT*LGLPCR
Trigger: TCTGCAAGGAAGGCCTAATCATGTTACAATCACTGC...AGGCACCCCCTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR TCA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGGCCTTTGTACTACACTaGAGACAGGTTGCTCACATA +
Preference number: 2 (lower is better)
Translates to: GLIRLRRLLTTLIISKALAFVLH*RQVAHI
Trigger: TATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGC...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR GCA 90 bp TTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGCAAGCCCCCTCACTCTaGCTTTGTACTACACTGAAG +
Preference number: 2 (lower is better)
Translates to: LLAKLWCWVPTIGQSCNKQAPSL*LCTTLK
Trigger: CTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTG...CTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR GCA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTACACTGAAGACAGGTTaGTCACATACTCTAAAGCAC +
Preference number: 2 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSTLKTG*SHTLKH
Trigger: GTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGT...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR TCA 90 bp TATTGCACTAATAGCACATCTGTAATATCAAGCTACAGGACAAGTCTTAACAAGGCCTTTGTACTACACTaGAGACAGGTTGCTCACATA +
Preference number: 2 (lower is better)
Translates to: YCTNSTSVISSYRTSLNKAFVLH*RQVAHI
Trigger: TATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGC...CTTGTTAAGACTTGTCCTGTAGCTTGATATTACAGATGTGCTATTAGTGCAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR-3UTR CAA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGGGGGAAAGCGGCGATTaGGTATTGGGCAAGAGCCAC +
Preference number: 3 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMGESGD*VLGKSH
Trigger: GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCC...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR CAA 90 bp GGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGGGGAAAGCGGCGATTaGGTATTGGGCAAGAGCCAC +
Preference number: 3 (lower is better)
Translates to: GRGSVGSDCNMIRPSLQMGESGD*VLGKSH
Trigger: GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCC...CATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR GCA 72 bp GAGTGGGGTTGGAAGGAGCCACAAGCCCCCTCACTCTaGCTTTGTACTACACTGAAGACAGGTTGCTCACAT +
Preference number: 3 (lower is better)
Translates to: EWGWKEPQAPSL*LCTTLKTGCSH
Trigger: ATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTGTGGCTCCTTCCAACCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR GCA 72 bp TGGGAGTGGGAAGAGTTGGGAGGCCAAGAAGCCCAATaGAACGCTGCAGCTGAGCTCCTTTTATTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: WEWEELGGQEAQ*NAAAELLLFLR
Trigger: CCTCAGAAATAAAAGGAGCTCAGCTGCAGCGTTGCATTGGGCTTCTTGGCCTCCCAACTCTTCCCACTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR TCA 72 bp GTTGGGAGGCCAAGAAGCCCAATGCAACGCTGCAGCTaGGCTCCTTTTATTTCTGAGGGAAGCAAGGACTCA +
Preference number: 3 (lower is better)
Translates to: VGRPRSPMQRCS*APFISEGSKDS
Trigger: TGAGTCCTTGCTTCCCTCAGAAATAAAAGGAGCTCAGCTGCAGCGTTGCATTGGGCTTCTTGGCCTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR-3UTR CAA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAACGGGGAGTGGGGTaGGAAGGAGCCACAAGCCCC +
Preference number: 3 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTERGVG*EGATSP
Trigger: GGGGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTC...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR CAA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTATGATTAGGCCTTCCTaGCAGATGGCGGCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTMIRPS*QMAAVL
Trigger: CAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCAT...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR-3UTR CAA 90 bp TCATCAGAATTAGAATTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGAGCAAAGCTCTGGTGTaGGGTTCCAACCATTGGTCA +
Preference number: 3 (lower is better)
Translates to: SSELELAAINRQYTATVRSKALV*GSNHWS
Trigger: TGACCAATGGTTGGAACCCAACACCAGAGCTTTGCT...CCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAATTCTAATTCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR GCA 72 bp CCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTaGTCACATACTCTAAAGCACATTCTTGATACAGGA +
Preference number: 3 (lower is better)
Translates to: PSLCLCTTLKTG*SHTLKHILDTG
Trigger: TCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR TCA 72 bp CTTTTGCTCATTTGTAACAAATCACTCCAGCCTAGCTaGTGCTTTGGGGTAAACAATGGAGTAGGAGTCATC +
Preference number: 3 (lower is better)
Translates to: LLLICNKSLQPS*CFGVNNGVGVI
Trigger: GATGACTCCTACTCCATTGTTTACCCCAAAGCATCAGCTAGGCTGGAGTGATTTGTTACAAATGAGCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR-3UTR CAA 90 bp ACAAGTCTTAACAAGAGGTTTGTGTTCTTCAATGTAGCACTTGTCTACCAGGCAGTTGGGTTCCAACCATaGGTCAAAGCTGTAATAAGA +
Preference number: 3 (lower is better)
Translates to: TSLNKRFVFFNVALVYQAVGFQP*VKAVIR
Trigger: TCTTATTACAGCTTTGACCAATGGTTGGAACCCAAC...TGCCTGGTAGACAAGTGCTACATTGAAGAACACAAACCTCTTGTTAAGACTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR GCA 72 bp TTACTTATTTCTCTGGGCAGACAGCCTTCACCTTATTaGACTAATAGCACATCTGTAATATCAAGCTACAGG +
Preference number: 3 (lower is better)
Translates to: LLISLGRQPSPY*TNSTSVISSYR
Trigger: CCTGTAGCTTGATATTACAGATGTGCTATTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp AGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGAAGGGGGAGGCCCGCTaGGAGAGGGTCAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPSLQMAAVLNGEWGWKEKGEAR*ERVSGQ
Trigger: CTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTT...CTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp TTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGCCACAAGCCAGTGAAGGGGGTGCCTaGGTAGGAAGGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LQMAAVLNGEWGWKEPQASEGGA*VGRGRP
Trigger: GGGCCTCCCCCTTCCTACTCAGGCACCCCCTTCACT...GGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGAACGGGTCCGGTGCATaGGTCGCTAACGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMNGSGA*VANALE
Trigger: TTCCAGGGCGTTAGCGACTCATGCACCGGACCCGTT...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGCAGCGGCAGAGGAGCTaGGGCCGGCGCCGGGAATTC +
Preference number: 4 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQQRQRS*GRRREF
Trigger: GAATTCCCGGCGCCGGCCCCAGCTCCTCTGCCGCTG...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCGCCGCCGCTTCCTGCTaGGCCAAGCGCGGGACACGT +
Preference number: 4 (lower is better)
Translates to: ESLNLMQLGLIRLRRLLTAAASC*AKRGTR
Trigger: ACGTGTCCCGCGCTTGGCGCAGCAGGAAGCGGCGGC...GGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGACTCCTCGCGCTTCCTaGGGATCAGCTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMTPRAS*GSAPLW
Trigger: CCAAAGAGGAGCTGATCCGCAGGAAGCGCGAGGAGT...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGACACGACGCTGTGGCTaGAGAATCTGCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMTRRCG*RICTRD
Trigger: GTCCCTGGTGCAGATTCTGCAGCCACAGCGTCGTGT...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGGGACCTGCAGGCTGTGTATCCTAGGGAGAGGTGCCATTCAAGACCTGGCGCTGAGTCGCTAACGCCCTaGAAGCACCAGAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: GDLQAVYPRERCHSRPGAESLTP*KHQSTS
Trigger: GCTTGTGCTCTGGTGCTTCCAGGGCGTTAGCGACTC...AGCGCCAGGTCTTGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp AGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGGTCTACACGACGCTGTaGCTGCAGAATCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: RPSLQMAAVLNGEWGWKEVYTTL*LQNLHQ
Trigger: CTGGTGCAGATTCTGCAGCCACAGCGTCGTGTAGAC...CTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CTTACTTCTGGATTCTGGGAGTGGGAAGAGTTGGGAGGCCAAGAAGCCCAATGCAAGGGGGAGGCCCGCTaGGAGAGGGTCAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTSGFWEWEELGGQEAQCKGEAR*ERVSGQ
Trigger: CTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTT...GCATTGGGCTTCTTGGCCTCCCAACTCTTCCCACTCCCAGAATCCAGAAGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp AGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGTTAGGAGGTGAAGGATaGGAGGGGAGGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: RPSLQMAAVLNGEWGWKELGGEG*EGRGSS
Trigger: TGATGACCCCCTCCCCTCCCATCCTTCACCTCCTAA...CTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGACCCACTGGAAGACCTaGCTTTTCTGCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMTHWKT*LFCRDW
Trigger: CCAGTCCCTGCAGAAAAGTCAGGTCTTCCAGTGGGT...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTGCCGCCGCTTCCTGCTaGGCCAAGCGCGGGACACGT +
Preference number: 4 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSAAASC*AKRGTR
Trigger: ACGTGTCCCGCGCTTGGCGCAGCAGGAAGCGGCGGC...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACTTCGCCGCCGCTTCCTaGTGCGCCAAGCGCGGGACA +
Preference number: 4 (lower is better)
Translates to: GSDCNMIRPSLQMAAVLNFAAAS*CAKRGT
Trigger: TGTCCCGCGCTTGGCGCAGCAGGAAGCGGCGGCGAA...GTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGGTGCCATTCAAGACCTaGCGCTGGCTCTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMVPFKT*RWLWKS
Trigger: ACTCTTCCAGAGCCAGCGCCAGGTCTTGAATGGCAC...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GGGGACCTGCAGGCTGTGTATCCTAGGGAGAGGTGCCATTCAAGACCTGGCGCTGAACAATGCCATCAATaGGCCGAGGTGTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GDLQAVYPRERCHSRPGAEQCHQ*AEVSEP
Trigger: TGGCTCAGACACCTCGGCTCATTGATGGCATTGTTC...AGCGCCAGGTCTTGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp GGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACAGTGAAGGGGGTGCCTaGGTAGGAAGGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSDCNMIRPSLQMAAVLNSEGGA*VGRGRP
Trigger: GGGCCTCCCCCTTCCTACTCAGGCACCCCCTTCACT...GTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGCCACAAGCCGCTGTTGGATCTCTGTaGGGTACTTGTCCCGAAACA +
Preference number: 4 (lower is better)
Translates to: LQMAAVLNGEWGWKEPQAAVGSL*GTCPET
Trigger: TGTTTCGGGACAAGTACCGCACAGAGATCCAACAGC...GGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CACATTCTTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGCTCAGAACGCCGGGTaGCCTCCCCATCTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: HILDTGRRACGESGDLVLAQNAG*PPHLRP
Trigger: CGGGCGGAGATGGGGAGGGCACCCGGCGTTCTGAGC...CAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532259.1
CDS-3UTR CCA 90 bp TTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGCCACAAGCCAAGCAATGGCTTCCATaGCAATGCCAGCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LQMAAVLNGEWGWKEPQAKQWLP*QCQQHP
Trigger: AGGATGCTGCTGGCATTGCCATGGAAGCCATTGCTT...GGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGGGACCTGCAGGCTGTGTATCCTAGGGAGAGGTGCCATTCAAGACCTGGCGCTAGGAAGAAGGGCTTGTaGGGAAAGCGGCGATTTGGT +
Preference number: 4 (lower is better)
Translates to: GDLQAVYPRERCHSRPGARKKGL*GKRRFG
Trigger: ACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCT...AGCGCCAGGTCTTGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCAGATGGCGGCTGTGCTaGACGGGGAGTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLRWRLC*TGSGVG
Trigger: TCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCT...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGAGATGGCGGCTGTGCTaGACGGGGAGTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: GRGSVGSDCNMIRPSLQMRWRLC*TGSGVG
Trigger: TCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCT...CATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGTCAGCATACCAAACATaGCACCCAGTGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMSAYQT*HPVFPW
Trigger: CCAAGGGAACACTGGGTGGCATGTTTGGTATGCTGA...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGTGTGTGTACGCAGCTaGTCCACGGCCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: GRGSVGSDCNMIRPSLQMVCVRS*STAPAR
Trigger: TCGTGCTGGGGCCGTGGAGCAGCTGCGTACACACAC...CATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGAGAGGGGCATTGTCTTaGATGCGGCCTGCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQRGALS*MRPAVS
Trigger: GGACACGGCAGGCCGCATGCAAGACAATGCCCCTCT...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CATCCAGGTCCTGGGGACCTGCAGGCTGTGTATCCTAGGGAGAGGTGCCATTCATATCCTAGGGAGAGGTaGCATTCAAGACCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: HPGPGDLQAVYPRERCHSYPRER*HSRPGA
Trigger: AGCGCCAGGTCTTGAATGGCACCTCTCCCTAGGATA...TGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCCAGGACCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp GGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTCAGGTCCTGGGGACCTaGAGGCTGTGTATCCTAGGG +
Preference number: 4 (lower is better)
Translates to: GSVGSDCNMIRPSLQMAAQVLGT*RLCILG
Trigger: CCCTAGGATACACAGCCTGCAGGTCCCCAGGACCTG...AGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGCAGCGGCAGAGGAGCTaGGGCCGGCGCCGGGAATTC +
Preference number: 4 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTEQRQRS*GRRREF
Trigger: GAATTCCCGGCGCCGGCCCCAGCTCCTCTGCCGCTG...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGGGACCTGCAGGCTGTGTATCCTAGGGAGAGGTGCCATTCAAGACCTGGCGCTACTTCGTGGACTTGTTaGACTTCTCCATACCCCTCC +
Preference number: 4 (lower is better)
Translates to: GDLQAVYPRERCHSRPGATSWTC*TSPYPS
Trigger: GGAGGGGTATGGAGAAGTCCAACAAGTCCACGAAGT...AGCGCCAGGTCTTGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGTTGAACTTGACCAGCTaGTCCACGGCTTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMLNLTS*STASLP
Trigger: AGGCAATGAAGCCGTGGACCAGCTGGTCAAGTTCAA...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCAACGGGGAGTGGGGTTaGAAGGAGCCACAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ESLNLMQLGLIRLRRLLTNGEWG*KEPQAP
Trigger: GGGGGCTTGTGGCTCCTTCCAACCCCACTCCCCGTT...GGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGTTCGCCGCCGCTTCCTaGTGCGCCAAGCGCGGGACA +
Preference number: 4 (lower is better)
Translates to: GCSHTLKHILDTGRRACGFAAAS*CAKRGT
Trigger: TGTCCCGCGCTTGGCGCAGCAGGAAGCGGCGGCGAA...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCGGGCATTGTCTTGCATaGGGCCTGCCGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLGHCLA*GLPCPP
Trigger: TGGTGGACACGGCAGGCCGCATGCAAGACAATGCCC...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGCCACAAGCCGGATCAGCTCCTCTTTaGAAAGTTCTACTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LQMAAVLNGEWGWKEPQAGSAPL*KVLLRS
Trigger: AGAACGGAGTAGAACTTTCCAAAGAGGAGCTGATCC...GGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CATCCAGGTCCTGGGGACCTGCAGGCTGTGTATCCTAGGGAGAGGTGCCATTCATTGAACTTGACCAGCTaGTCCACGGCTTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: HPGPGDLQAVYPRERCHSLNLTS*STASLP
Trigger: AGGCAATGAAGCCGTGGACCAGCTGGTCAAGTTCAA...TGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCCAGGACCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR CAA 72 bp TCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTaGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SVGSDCNMIRPS*QMAAVLNGEWG
Trigger: ACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
3UTR CAA 72 bp GCAGAGCTTACTTCTGGATTCTGGGAGTGGGAAGAGTaGGGAGGCCAAGAAGCCCAATGCAACGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AELTSGFWEWEE*GGQEAQCNAAA
Trigger: AGCTGCAGCGTTGCATTGGGCTTCTTGGCCTCCCAACTCTTCCCACTCCCAGAATCCAGAAGTAAGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTAACGGGTCCGGTGCATaGGTCGCTAACGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSNGSGA*VANALE
Trigger: TTCCAGGGCGTTAGCGACTCATGCACCGGACCCGTT...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCCCCCTCCCATGCTTCTaGATGAACTCCTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLPLPCF*MNSSRF
Trigger: GAAGCGCGAGGAGTTCATTCAGAAGCATGGGAGGGG...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp ACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCACACGACTCAAGCTCTTTaGACCCACAAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TGRRACGESGDLVLGKSHTTQAL*THKALQ
Trigger: CTGAAGGGCCTTGTGGGTTCAAAGAGCTTGAGTCGT...GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGATGGTGCGGCCACCATaGTTCTCTGGAGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GRGSVGSDCNMIRPSLQMMVRPP*FSGGCR
Trigger: CCTACACCCTCCAGAGAAGCATGGTGGCCGCACCAT...CATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGGGATCAGCTCCTCTTTaGAAAGTTCTACTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMGSAPL*KVLLRS
Trigger: AGAACGGAGTAGAACTTTCCAAAGAGGAGCTGATCC...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGCGCTGGCGACGCTaGGCATCCATGATGTCCCGG +
Preference number: 4 (lower is better)
Translates to: VPTIGQSCNKTESVGRVKGRWRR*ASMMSR
Trigger: CCGGGACATCATGGATGCCCAGCGTCGCCAGCGCCC...CTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGGCGCTGGCGACGCTaGGCATCCATGATGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LWCWVPTIGQSCNKTESVGRWRR*ASMMSR
Trigger: CCGGGACATCATGGATGCCCAGCGTCGCCAGCGCCC...TACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp ACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCACGCGGCGATTTGGTATTaGGCAAGAGCCACGTTAAGC +
Preference number: 4 (lower is better)
Translates to: TGRRACGESGDLVLGKSHAAIWY*ARATLS
Trigger: GCTTAACGTGGCTCTTGCCCAATACCAAATCGCCGC...GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGTCCCTCGAATCAGGTTaGTGTCCTCAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQSLESG*CPQTRQ
Trigger: CTGCCTTGTCTGAGGACATCAACCTGATTCGAGGGA...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTTGGAAGTCACCGTGCTaGACGTCCCCATCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSWKSPC*TSPSPS
Trigger: GGAAGGTGATGGGGACGTTCAGCACGGTGACTTCCA...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCATGAGCCGAGGTGTCTaGGCCATAGAATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLMSRGV*AIEWSA
Trigger: GGCTGACCATTCTATGGCTCAGACACCTCGGCTCAT...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp CATCCAGGTCCTGGGGACCTGCAGGCTGTGTATCCTAGGGAGAGGTGCCATTCACATCATACATCCTTCTaGCAATTGGTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HPGPGDLQAVYPRERCHSHHTSF*QLVSSQ
Trigger: CTGGGAGGAAACCAATTGTCAGAAGGATGTATGATG...TGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCCAGGACCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTGTGGCTGCAGAATCTaGACCAGGGACTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLCGCRI*TRDSCR
Trigger: CCTACAGGAGTCCCTGGTGCAGATTCTGCAGCCACA...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GGGGACCTGCAGGCTGTGTATCCTAGGGAGAGGTGCCATTCAAGACCTGGCGCTACACTGAAGACAGGTTaGTCACATACTCTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GDLQAVYPRERCHSRPGATLKTG*SHTLKH
Trigger: GTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGT...AGCGCCAGGTCTTGAATGGCACCTCTCCCTAGGATACACAGCCTGCAGGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp GGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTCAAACAACTGCACCATaGTGCGGCCACCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSVGSDCNMIRPSLQMAAQTTAP*CGHHAS
Trigger: AGAAGCATGGTGGCCGCACCATGGTGCAGTTGTTTG...AGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp AGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGAATTACTTATTTCTCTaGGCAGACAGCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: RPSLQMAAVLNGEWGWKENYLFL*ADSLHL
Trigger: AAGGTGAAGGCTGTCTGCCCAGAGAAATAAGTAATT...CTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR CAA 72 bp GGGTTGGAAGGAGCCACAAGCCCCCTCACTCTGCCTTaGTACTACACTGAAGACAGGTTGCTCACATACTCT +
Preference number: 4 (lower is better)
Translates to: GLEGATSPLTLP*YYTEDRLLTYS
Trigger: AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTGTGGCTCCTTCCAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp CTTACTTCTGGATTCTGGGAGTGGGAAGAGTTGGGAGGCCAAGAAGCCCAATGCGGTTTGGTAGAGTTTTaGGCAGCCCCTTCGTCATCA +
Preference number: 4 (lower is better)
Translates to: LTSGFWEWEELGGQEAQCGLVEF*AAPSSS
Trigger: TGATGACGAAGGGGCTGCTCAAAACTCTACCAAACC...GCATTGGGCTTCTTGGCCTCCCAACTCTTCCCACTCCCAGAATCCAGAAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCGAACAATGCCATCAATaGGCCGAGGTGTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLEQCHQ*AEVSEP
Trigger: TGGCTCAGACACCTCGGCTCATTGATGGCATTGTTC...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp ATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGGTGCCTCCACAGCCTTGGCATTaGGGCTGCGTAGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: IGQSCNKTESVGRVKGVPPQPWH*GCVGHS
Trigger: ACTGTGACCTACGCAGCCTCAATGCCAAGGCTGTGG...AGGCACCCCCTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CTTACTTCTGGATTCTGGGAGTGGGAAGAGTTGGGAGGCCAAGAAGCCCAATGCGAGCACGGATCTTACTaGTCTCCTCTGCTTCACGAA +
Preference number: 4 (lower is better)
Translates to: LTSGFWEWEELGGQEAQCEHGSY*SPLLHE
Trigger: TTCGTGAAGCAGAGGAGAGCAGTAAGATCCGTGCTC...GCATTGGGCTTCTTGGCCTCCCAACTCTTCCCACTCCCAGAATCCAGAAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp CACATTCTTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGACACGACGCTGTGGCTaGAGAATCTGCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HILDTGRRACGESGDLVLTRRCG*RICTRD
Trigger: GTCCCTGGTGCAGATTCTGCAGCCACAGCGTCGTGT...CAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTCAAGCCCCCTCACTCTaGCTTTGTACTACACTGAAG +
Preference number: 4 (lower is better)
Translates to: GSVGSDCNMIRPSLQMAAQAPSL*LCTTLK
Trigger: CTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTG...AGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTTCCCTCGAATCAGGTTaGTGTCCTCAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSSLESG*CPQTRQ
Trigger: CTGCCTTGTCTGAGGACATCAACCTGATTCGAGGGA...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGGACGCTGGGCATCCATaGTGTCCCGGAGCATGTCTA +
Preference number: 4 (lower is better)
Translates to: GCSHTLKHILDTGRRACGDAGHP*CPGACL
Trigger: TAGACATGCTCCGGGACATCATGGATGCCCAGCGTC...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGCCACAGCCTTGGCATTaGGGCTGCGTAGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: GLIRLRRLLTTLIISKALPQPWH*GCVGHS
Trigger: ACTGTGACCTACGCAGCCTCAATGCCAAGGCTGTGG...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACCTTCGTCATCAGAGCTaGTGCAGTCCAGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: GSDCNMIRPSLQMAAVLNLRHQS*CSPDPE
Trigger: TTCAGGATCTGGACTGCAGCAGCTCTGATGACGAAG...GTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCCTGGACGGCAATGTCTaGAGCCACGTTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: ESLNLMQLGLIRLRRLLTLDGNV*SHVLSN
Trigger: ATTGCTAAGAACGTGGCTGCAGACATTGCCGTCCAG...GGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGCGGGTGTCATCCAGGCCTCAGGGGTTCCATTaGTGGTGGGAGTACTGTAAT +
Preference number: 4 (lower is better)
Translates to: LAAINRQYTATVRRVSSRPQGFH*WWEYCN
Trigger: ATTACAGTACTCCCACCACCAATGGAACCCCTGAGG...CCTGGATGACACCCGCCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp GTCATCATACATCCTTCTGACAATTGGTTTCCTCCCAGGAAGGGGAACATGCAGGTCTACACGACGCTGTaGCTGCAGAATCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: VIIHPSDNWFPPRKGNMQVYTTL*LQNLHQ
Trigger: CTGGTGCAGATTCTGCAGCCACAGCGTCGTGTAGAC...CTGCATGTTCCCCTTCCTGGGAGGAAACCAATTGTCAGAAGGATGTATGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGTACGTGCAAAAGCAATaGCTTCCATGGCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQYVQKQ*LPWQCQ
Trigger: CTGGCATTGCCATGGAAGCCATTGCTTTTGCACGTA...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp ACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCACACCACGTCAAAGCCTTaGTTACGTGCAAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: TGRRACGESGDLVLGKSHTTSKP*LRAKAM
Trigger: CATTGCTTTTGCACGTAACCAAGGCTTTGACGTGGT...GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CACATTCTTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGGAAAGCGGCGATTTaGTATTGGGCAAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: HILDTGRRACGESGDLVLGKAAI*YWARAT
Trigger: CGTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCC...CAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCTTCAAGACCTGGCGCTaGCTCTGGAAGAGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ESLNLMQLGLIRLRRLLTFKTWR*LWKSLL
Trigger: TAAGAGACTCTTCCAGAGCCAGCGCCAGGTCTTGAA...GGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp ATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGGTGCCTCCTTGGAGAAAATGGTaGAGAAGTCGAGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: IGQSCNKTESVGRVKGVPPWRKW*RSRAWR
Trigger: CCGCCATGCTCGACTTCTTCACCATTTTCTCCAAGG...AGGCACCCCCTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGACCCACTGGAAGACCTaGCTTTTCTGCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GCSHTLKHILDTGRRACGTHWKT*LFCRDW
Trigger: CCAGTCCCTGCAGAAAAGTCAGGTCTTCCAGTGGGT...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp CGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTCCCATGCTTCTGAATaGACTCCTCGCGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLLTTLIISKALVLGSNHSHASE*TPRASC
Trigger: GCAGGAAGCGCGAGGAGTTCATTCAGAAGCATGGGA...ATGGTTGGAACCCAACACCAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp AGGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTAGCCCCCTCCCATGCTTCTaGATGAACTCCTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: REARTHLLLICNKSLQPSPLPCF*MNSSRF
Trigger: GAAGCGCGAGGAGTTCATTCAGAAGCATGGGAGGGG...GCTAGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp GTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGTGGAAGTCACCGTGCTaGACGTCCCCATCACCTTCC +
Preference number: 4 (lower is better)
Translates to: VPTIGQSCNKTESVGRVKWKSPC*TSPSPS
Trigger: GGAAGGTGATGGGGACGTTCAGCACGGTGACTTCCA...CTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGAATACACTGCCACAGTaGGGCGGGTGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTENTLPQ*GGCHPG
Trigger: ACCTGGATGACACCCGCCTCACTGTGGCAGTGTATT...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp GGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGTCACTCCAGCCTAGCTaGTGCTTTGGGGTAAACAAT +
Preference number: 4 (lower is better)
Translates to: GRGSVGSDCNMIRPSLQMSLQPS*CFGVNN
Trigger: ATTGTTTACCCCAAAGCATCAGCTAGGCTGGAGTGA...CATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTGAGCACGGATCTTACTaGTCTCCTCTGCTTCACGAA +
Preference number: 4 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSEHGSY*SPLLHE
Trigger: TTCGTGAAGCAGAGGAGAGCAGTAAGATCCGTGCTC...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGGTGTGTGTACGCAGCTaGTCCACGGCCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: LLAKLWCWVPTIGQSCNKVCVRS*STAPAR
Trigger: TCGTGCTGGGGCCGTGGAGCAGCTGCGTACACACAC...CTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATAGTAGGTCTGGCCGGTaGCCACAAAGACGATGGGTT +
Preference number: 4 (lower is better)
Translates to: RLLTTLIISKALVLGSNHSRSGR*PQRRWV
Trigger: AACCCATCGTCTTTGTGGGCACCGGCCAGACCTACT...ATGGTTGGAACCCAACACCAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTAAAGCACTTTGCTGTTaGATCTCTGTGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GSVGSDCNMIRPSLQMAAKALCC*ISVRYL
Trigger: CAAGTACCGCACAGAGATCCAACAGCAAAGTGCTTT...AGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCGAGCATCTGACTTCGTaGACTTGTTGGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLEHLTS*TCWTSP
Trigger: TGGAGAAGTCCAACAAGTCCACGAAGTCAGATGCTC...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGGGTTCCATTGGTGGTaGGAGTACTGTAATCCAACA +
Preference number: 4 (lower is better)
Translates to: GSDCNMIRPSLQMAAVLNGFHWW*EYCNPT
Trigger: TGTTGGATTACAGTACTCCCACCACCAATGGAACCC...GTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CACATTCTTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGCGGCGATTTGGTATTaGGCAAGAGCCACGTTAAGC +
Preference number: 4 (lower is better)
Translates to: HILDTGRRACGESGDLVLAAIWY*ARATLS
Trigger: GCTTAACGTGGCTCTTGCCCAATACCAAATCGCCGC...CAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGGGGAAAGCGGCGATTTaGTATTGGGCAAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: GCSHTLKHILDTGRRACGGKAAI*YWARAT
Trigger: CGTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCC...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGACGCTGGGCATCCATaGTGTCCCGGAGCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTDAGHP*CPGACL
Trigger: TAGACATGCTCCGGGACATCATGGATGCCCAGCGTC...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGCAGTGATTGTAACATaGTTAGGCCTTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GSDCNMIRPSLQMAAVLNAVIVT*LGLPCR
Trigger: TCTGCAAGGAAGGCCTAATCATGTTACAATCACTGC...GTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp ATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGGTGCCTAGTGTCAGGATCTTCTaGAAACCAACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IGQSCNKTESVGRVKGVPSVRIF*KPTCSS
Trigger: GCTGCTGCAGGTTGGTTTTCAGAAGATCCTGACACT...AGGCACCCCCTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532259.1
CDS-3UTR GCA 90 bp AGTCTTAACAAGAGGTTTGTGTTCTTCAATGTAGCACTTGTCTACCAGGCACTGACTCCTCGCGCTTCCTaGGGATCAGCTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLNKRFVFFNVALVYQALTPRAS*GSAPLW
Trigger: CCAAAGAGGAGCTGATCCGCAGGAAGCGCGAGGAGT...CAGTGCCTGGTAGACAAGTGCTACATTGAAGAACACAAACCTCTTGTTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp ACAAGTCTTAACAAGAGGTTTGTGTTCTTCAATGTAGCACTTGTCTACCAGGCAGGGCATTGTCTTGCATaGGGCCTGCCGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TSLNKRFVFFNVALVYQAGHCLA*GLPCPP
Trigger: TGGTGGACACGGCAGGCCGCATGCAAGACAATGCCC...TGCCTGGTAGACAAGTGCTACATTGAAGAACACAAACCTCTTGTTAAGACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp ATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGGTGCCTGGTCCACGGCTTCATTaGCTACTAAGGCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: IGQSCNKTESVGRVKGVPGPRLH*LLRLLL
Trigger: TAGGAGAAGCCTTAGTAGGCAATGAAGCCGTGGACC...AGGCACCCCCTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGAGTAGGTCTGGCCGGTaGCCACAAAGACGATGGGTT +
Preference number: 4 (lower is better)
Translates to: VPTIGQSCNKTESVGRVKSRSGR*PQRRWV
Trigger: AACCCATCGTCTTTGTGGGCACCGGCCAGACCTACT...CTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp AACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTAGGAAAAGCCAGGACTaGTTAGGAGGTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: NLMQLGLIRLRRLLTTLIRKSQD*LGGEGW
Trigger: CCATCCTTCACCTCCTAAGCAGTCCTGGCTTTTCCT...AATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp CACATTCTTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGCCTCAGGGGTTCCATTaGTGGTGGGAGTACTGTAAT +
Preference number: 4 (lower is better)
Translates to: HILDTGRRACGESGDLVLPQGFH*WWEYCN
Trigger: ATTACAGTACTCCCACCACCAATGGAACCCCTGAGG...CAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGACAGATTCACAGAGCTaGACGGCAATGTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GCSHTLKHILDTGRRACGTDSQS*TAMSAA
Trigger: GGCTGCAGACATTGCCGTCCAGCTCTGTGAATCTGT...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCTCCCTTCCAACTTGTTaGCAACAGATTCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: ESLNLMQLGLIRLRRLLTSLPTC*QQIHRA
Trigger: AGCTCTGTGAATCTGTTGCCAACAAGTTGGAAGGGA...GGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATAGGAAGAAGGGCTTGTaGGGAAAGCGGCGATTTGGT +
Preference number: 4 (lower is better)
Translates to: RLLTTLIISKALVLGSNHRKKGL*GKRRFG
Trigger: ACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCT...ATGGTTGGAACCCAACACCAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp ATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGGTGCCTTTCAAGACCTGGCGCTaGCTCTGGAAGAGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: IGQSCNKTESVGRVKGVPFKTWR*LWKSLL
Trigger: TAAGAGACTCTTCCAGAGCCAGCGCCAGGTCTTGAA...AGGCACCCCCTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CACATTCTTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGCATCCTTCTGACAATTaGTTTCCTCCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HILDTGRRACGESGDLVLHPSDN*FPPRKG
Trigger: CCCCTTCCTGGGAGGAAACCAATTGTCAGAAGGATG...CAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp CTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGACACGTCACACCAGTaGCCCCGGAAATCGGCTCAA +
Preference number: 4 (lower is better)
Translates to: LKTGCSHTLKHILDTGRRDTSHQ*PRKSAQ
Trigger: TTGAGCCGATTTCCGGGGCCACTGGTGTGACGTGTC...CCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532259.1
CDS-3UTR GCA 90 bp CAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTGTTGGATCTCTGTaGGGTACTTGTCCCGAAACA +
Preference number: 4 (lower is better)
Translates to: QLGLIRLRRLLTTLIISKAVGSL*GTCPET
Trigger: TGTTTCGGGACAAGTACCGCACAGAGATCCAACAGC...TTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp ACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAATGGTGCGGCCACCATaGTTCTCTGGAGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TTLKTGCSHTLKHILDTGMVRPP*FSGGCR
Trigger: CCTACACCCTCCAGAGAAGCATGGTGGCCGCACCAT...TCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTACCCTTTTCAAACAACTaGACCATGGTGCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LWCWVPTIGQSCNKTESVPFSNN*TMVRPP
Trigger: TGGTGGCCGCACCATGGTGCAGTTGTTTGAAAAGGG...TACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAAGAGGGGCATTGTCTTaGATGCGGCCTGCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: CTTLKTGCSHTLKHILDTRGALS*MRPAVS
Trigger: GGACACGGCAGGCCGCATGCAAGACAATGCCCCTCT...TGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp ACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAGGCCAAGAAGCCCAATaGAACGCTGCAGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TTLKTGCSHTLKHILDTGGQEAQ*NAAAEL
Trigger: GAGCTCAGCTGCAGCGTTGCATTGGGCTTCTTGGCC...TCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp CTTACTTCTGGATTCTGGGAGTGGGAAGAGTTGGGAGGCCAAGAAGCCCAATGCCAGCCTTCACCTTATTaGACTAATAGCACATCTGTA +
Preference number: 4 (lower is better)
Translates to: LTSGFWEWEELGGQEAQCQPSPY*TNSTSV
Trigger: TACAGATGTGCTATTAGTGCAATAAGGTGAAGGCTG...GCATTGGGCTTCTTGGCCTCCCAACTCTTCCCACTCCCAGAATCCAGAAGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp CGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATCCCGTGTCTCAATCATaGACCTCACAGGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RLLTTLIISKALVLGSNHPVSQS*TSQVSW
Trigger: CCAAGAAACCTGTGAGGTCCATGATTGAGACACGGG...ATGGTTGGAACCCAACACCAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGCTTTTCTGCAGGGACTaGTTTGCTGGTAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GCSHTLKHILDTGRRACGLFCRD*FAGSQR
Trigger: CCTTTGGCTACCAGCAAACCAGTCCCTGCAGAAAAG...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGCAGGGGTTCCATTGGTaGTGGGAGTACTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: GLIRLRRLLTTLIISKALQGFHW*WEYCNP
Trigger: TGGATTACAGTACTCCCACCACCAATGGAACCCCTG...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGACAGATTCACAGAGCTaGACGGCAATGTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VPTIGQSCNKTESVGRVKTDSQS*TAMSAA
Trigger: GGCTGCAGACATTGCCGTCCAGCTCTGTGAATCTGT...CTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp AACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTGCAAAGCTCTGGTGTTaGGTTCCAACCATTGGTCAA +
Preference number: 4 (lower is better)
Translates to: NLMQLGLIRLRRLLTTLIAKLWC*VPTIGQ
Trigger: TTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC...AATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTTCTGGATTCTGGGAGTaGGAAGAGTTGGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSSGFWE*EELGGQ
Trigger: TTGGCCTCCCAACTCTTCCCACTCCCAGAATCCAGA...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTCCTTGGAGAAAATGGTaGAGAAGTCGAGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTPWRKW*RSRAWR
Trigger: CCGCCATGCTCGACTTCTTCACCATTTTCTCCAAGG...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTCCTTTGGAGCATCTaGCTTCGTGGACTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSLLWSI*LRGLVG
Trigger: TCCAACAAGTCCACGAAGTCAGATGCTCCAAAGGAG...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGATGCAACGCTGCAGCTaGGCTCCTTTTATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTEMQRCS*APFISE
Trigger: CTCAGAAATAAAAGGAGCTCAGCTGCAGCGTTGCAT...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp CTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGCGTCATCAGAGCTGCTaGAGTCCAGATCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LKTGCSHTLKHILDTGRRRHQSC*SPDPEA
Trigger: AGCTTCAGGATCTGGACTGCAGCAGCTCTGATGACG...CCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTCGTCATCAGAGCTGCTaGAGTCCAGATCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTRHQSC*SPDPEA
Trigger: AGCTTCAGGATCTGGACTGCAGCAGCTCTGATGACG...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTATCAGCATACCAAACATaGCACCCAGTGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LWCWVPTIGQSCNKTESVSAYQT*HPVFPW
Trigger: CCAAGGGAACACTGGGTGGCATGTTTGGTATGCTGA...TACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp AGGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTAGCCTGGACGGCAATGTCTaGAGCCACGTTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: REARTHLLLICNKSLQPSLDGNV*SHVLSN
Trigger: ATTGCTAAGAACGTGGCTGCAGACATTGCCGTCCAG...GCTAGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTGACTCCTGTAGGGCTTaGTTTACTGTGGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSDSCRA*FTVEVT
Trigger: GGTGACTTCCACAGTAAAGCAAGCCCTACAGGAGTC...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTTGTGGCTGCAGAATCTaGACCAGGGACTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: CLCTTLKTGCSHTLKHILCGCRI*TRDSCR
Trigger: CCTACAGGAGTCCCTGGTGCAGATTCTGCAGCCACA...AAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTACAAGCCCCCTCACTCTaGCTTTGTACTACACTGAAG +
Preference number: 4 (lower is better)
Translates to: LWCWVPTIGQSCNKTESVQAPSL*LCTTLK
Trigger: CTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTG...TACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTTATCCTAGGGAGAGGTaGCATTCAAGACCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTYPRER*HSRPGA
Trigger: AGCGCCAGGTCTTGAATGGCACCTCTCCCTAGGATA...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp CGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATCCAGGAAGGGGAACATaGAGAGCTTACTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: RLLTTLIISKALVLGSNHPGRGT*RAYFWI
Trigger: AATCCAGAAGTAAGCTCTGCATGTTCCCCTTCCTGG...ATGGTTGGAACCCAACACCAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp TGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGAGTCGCTAACGCCCTaGAAGCACCAGAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: CTTLKTGCSHTLKHILDTESLTP*KHQSTS
Trigger: GCTTGTGCTCTGGTGCTTCCAGGGCGTTAGCGACTC...TGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACCTCACAGGTTTCTTaGCCTTTTCAGAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: ESLNLMQLGLIRLRRLLTTSQVS*PFQNLQ
Trigger: TTGAAGATTCTGAAAAGGCCAAGAAACCTGTGAGGT...GGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTACTTTTCTGCAGGGACTaGTTTGCTGGTAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LWCWVPTIGQSCNKTESVLFCRD*FAGSQR
Trigger: CCTTTGGCTACCAGCAAACCAGTCCCTGCAGAAAAG...TACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGGGGTTCCATTGGTGGTaGGAGTACTGTAATCCAACA +
Preference number: 4 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTEGFHWW*EYCNPT
Trigger: TGTTGGATTACAGTACTCCCACCACCAATGGAACCC...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCAAAGCTCTGGTGTTaGGTTCCAACCATTGGTCAA +
Preference number: 4 (lower is better)
Translates to: QLGLIRLRRLLTTLIISKAKLWC*VPTIGQ
Trigger: TTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC...TTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGTTATTAGCAAAGCTCTaGTGTTGGGTTCCAACCATT +
Preference number: 4 (lower is better)
Translates to: GRGSVGSDCNMIRPSLQMLLAKL*CWVPTI
Trigger: AATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA...CATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGGTGCCATTCAAGACCTaGCGCTGGCTCTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LLAKLWCWVPTIGQSCNKVPFKT*RWLWKS
Trigger: ACTCTTCCAGAGCCAGCGCCAGGTCTTGAATGGCAC...CTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGTGTCATCCAGGTCCTaGGGACCTGCAGGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: CTTLKTGCSHTLKHILDTVSSRS*GPAGCV
Trigger: TACACAGCCTGCAGGTCCCCAGGACCTGGATGACAC...TGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
3UTR CAA 72 bp CTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTaGACCACACTAATTATTAGCAAAGCTCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LMQLGLIRLRRL*TTLIISKALVL
Trigger: CAACACCAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGGTTTGGTAGAGTTTTaGGCAGCCCCTTCGTCATCA +
Preference number: 4 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTGLVEF*AAPSSS
Trigger: TGATGACGAAGGGGCTGCTCAAAACTCTACCAAACC...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp ACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAACGACTCAAGCTCTTTaGACCCACAAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TTLKTGCSHTLKHILDTGTTQAL*THKALQ
Trigger: CTGAAGGGCCTTGTGGGTTCAAAGAGCTTGAGTCGT...TCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGTTCTTAGCAATGAGATaGTCACGCATCTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLIRLRRLLTTLIISKALFLAMR*SRILSS
Trigger: GCTGGACAAGATGCGTGATCATCTCATTGCTAAGAA...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp TGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAATGAGCCGAGGTGTCTaGGCCATAGAATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: CTTLKTGCSHTLKHILDTMSRGV*AIEWSA
Trigger: GGCTGACCATTCTATGGCTCAGACACCTCGGCTCAT...TGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTCCCTTTTCAAACAACTaGACCATGGTGCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: CLCTTLKTGCSHTLKHILPFSNN*TMVRPP
Trigger: TGGTGGCCGCACCATGGTGCAGTTGTTTGAAAAGGG...AAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGTGCCAGCAGCATCCTTaGCATAGCCCTTTTCAAACA +
Preference number: 4 (lower is better)
Translates to: VPTIGQSCNKTESVGRVKCQQHP*HSPFQT
Trigger: TGTTTGAAAAGGGCTATGGCAAGGATGCTGCTGGCA...CTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp AGGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTAGCAGTGTGAGTGCCTCATaGGTGAAGGAGTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: REARTHLLLICNKSLQPSSVSAS*VKELLP
Trigger: AGGTAACAACTCCTTCACCCATGAGGCACTCACACT...GCTAGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTACCTCACAGGTTTCTTaGCCTTTTCAGAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSTSQVS*PFQNLQ
Trigger: TTGAAGATTCTGAAAAGGCCAAGAAACCTGTGAGGT...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGACTTCGTGGACTTGTTaGACTTCTCCATACCCCTCC +
Preference number: 4 (lower is better)
Translates to: LKTGCSHTLKHILDTGRRTSWTC*TSPYPS
Trigger: GGAGGGGTATGGAGAAGTCCAACAAGTCCACGAAGT...CCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGAGCATCTGACTTCGTaGACTTGTTGGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPTIGQSCNKTESVGRVKEHLTS*TCWTSP
Trigger: TGGAGAAGTCCAACAAGTCCACGAAGTCAGATGCTC...CTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp CAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAATCCCTTCCAACTTGTTaGCAACAGATTCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: QLGLIRLRRLLTTLIISKSLPTC*QQIHRA
Trigger: AGCTCTGTGAATCTGTTGCCAACAAGTTGGAAGGGA...TTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGCAAACAACTGCACCATaGTGCGGCCACCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLAKLWCWVPTIGQSCNKQTTAP*CGHHAS
Trigger: AGAAGCATGGTGGCCGCACCATGGTGCAGTTGTTTG...CTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTAGCTTACGTGCAAAAGCAATaGCTTCCATGGCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: GKQGLIFCSFVTNHSSLAYVQKQ*LPWQCQ
Trigger: CTGGCATTGCCATGGAAGCCATTGCTTTTGCACGTA...AGCTAGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGACCACGTCAAAGCCTTaGTTACGTGCAAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTETTSKP*LRAKAM
Trigger: CATTGCTTTTGCACGTAACCAAGGCTTTGACGTGGT...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp ATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGGTGCCTCTTTGGGGTAAACAATaGAGTAGGAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: IGQSCNKTESVGRVKGVPLWGKQ*SRSHHQ
Trigger: CTGATGATGACTCCTACTCCATTGTTTACCCCAAAG...AGGCACCCCCTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp CTGAGGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTTGCAGAGCTTACTTCTaGATTCTGGGAGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LREARTHLLLICNKSLQPCRAYF*ILGVGR
Trigger: TCTTCCCACTCCCAGAATCCAGAAGTAAGCTCTGCA...AGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTGCCTTTGTACTACACTaGAGACAGGTTGCTCACATA +
Preference number: 4 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSAFVLH*RQVAHI
Trigger: TATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGC...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGAAACTTAAAGCACTTTaGTGTTGGATCTCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTEKLKAL*CWISVR
Trigger: CCGCACAGAGATCCAACAGCAAAGTGCTTTAAGTTT...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TCATCAGAATTAGAATTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGGGTCCACGGCTTCATTaGCTACTAAGGCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SSELELAAINRQYTATVRGPRLH*LLRLLL
Trigger: TAGGAGAAGCCTTAGTAGGCAATGAAGCCGTGGACC...CCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAATTCTAATTCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CCA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTAAAGCACTTTGCTGTTaGATCTCTGTGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSKALCC*ISVRYL
Trigger: CAAGTACCGCACAGAGATCCAACAGCAAAGTGCTTT...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTCAGGGGTTCCATTGGTaGTGGGAGTACTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: CLCTTLKTGCSHTLKHILQGFHW*WEYCNP
Trigger: TGGATTACAGTACTCCCACCACCAATGGAACCCCTG...AAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR TCA 90 bp TATTGCACTAATAGCACATCTGTAATATCAAGCTACAGGACAAGTCTTAACAAGTCCCATGCTTCTGAATaGACTCCTCGCGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YCTNSTSVISSYRTSLNKSHASE*TPRASC
Trigger: GCAGGAAGCGCGAGGAGTTCATTCAGAAGCATGGGA...CTTGTTAAGACTTGTCCTGTAGCTTGATATTACAGATGTGCTATTAGTGCAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp TGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGACTCCTGTAGGGCTTaGTTTACTGTGGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: CTTLKTGCSHTLKHILDTDSCRA*FTVEVT
Trigger: GGTGACTTCCACAGTAAAGCAAGCCCTACAGGAGTC...TGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp ACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGATGCCAGCAGCATCCTTaGCATAGCCCTTTTCAAACA +
Preference number: 4 (lower is better)
Translates to: TTLKTGCSHTLKHILDTGCQQHP*HSPFQT
Trigger: TGTTTGAAAAGGGCTATGGCAAGGATGCTGCTGGCA...TCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACACCCGTGTCTCAATCATaGACCTCACAGGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: CTTLKTGCSHTLKHILDTPVSQS*TSQVSW
Trigger: CCAAGAAACCTGTGAGGTCCATGATTGAGACACGGG...TGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAAAGCAATGGCTTCCATaGCAATGCCAGCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: CTTLKTGCSHTLKHILDTKQWLP*QCQQHP
Trigger: AGGATGCTGCTGGCATTGCCATGGAAGCCATTGCTT...TGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGTTATTAGCAAAGCTCTaGTGTTGGGTTCCAACCATT +
Preference number: 4 (lower is better)
Translates to: GLIRLRRLLTTLIISKALLLAKL*CWVPTI
Trigger: AATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp TTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGCTTACTTCTGGATTCTaGGAGTGGGAAGAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLAKLWCWVPTIGQSCNKLTSGF*EWEELG
Trigger: TCCCAACTCTTCCCACTCCCAGAATCCAGAAGTAAG...CTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp TCATCAGAATTAGAATTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGAGTGTCAGGATCTTCTaGAAACCAACCACAAACACC +
Preference number: 4 (lower is better)
Translates to: SSELELAAINRQYTATVRSVRIF*KPTTNT
Trigger: GGTGTTTGTGGTTGGTTTTCAGAAGATCCTGACACT...CCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAATTCTAATTCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp TCATCAGAATTAGAATTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGTTCTTAGCAATGAGATaGTCACGCATCTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSELELAAINRQYTATVRFLAMR*SRILSS
Trigger: GCTGGACAAGATGCGTGATCATCTCATTGCTAAGAA...CCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAATTCTAATTCTGATGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR TCA 90 bp TTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGGCCTTTGTACTACACTaGAGACAGGTTGCTCACATA +
Preference number: 4 (lower is better)
Translates to: LLAKLWCWVPTIGQSCNKAFVLH*RQVAHI
Trigger: TATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGC...CTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp TTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGTCCCGAAACAGCCGATaGACGTCATCTATCAATTTG +
Preference number: 4 (lower is better)
Translates to: LLAKLWCWVPTIGQSCNKSRNSR*TSSINL
Trigger: CAAATTGATAGATGACGTGCATCGGCTGTTTCGGGA...CTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CCA 90 bp AGGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTAGCAACACCAGCTCAAACTaGTTGTCCAGTTTATACTTG +
Preference number: 4 (lower is better)
Translates to: REARTHLLLICNKSLQPSNTSSN*LSSLYL
Trigger: CAAGTATAAACTGGACAACCAGTTTGAGCTGGTGTT...GCTAGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp TCATCAGAATTAGAATTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGAAACTTAAAGCACTTTaGTGTTGGATCTCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: SSELELAAINRQYTATVRKLKAL*CWISVR
Trigger: CCGCACAGAGATCCAACAGCAAAGTGCTTTAAGTTT...CCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAATTCTAATTCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp TATTGCACTAATAGCACATCTGTAATATCAAGCTACAGGACAAGTCTTAACAAGCTTCGTCATCAGAGCTaGTGCAGTCCAGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: YCTNSTSVISSYRTSLNKLRHQS*CSPDPE
Trigger: TTCAGGATCTGGACTGCAGCAGCTCTGATGACGAAG...CTTGTTAAGACTTGTCCTGTAGCTTGATATTACAGATGTGCTATTAGTGCAATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR GCA 90 bp TGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTACACTGAAGACAGGTTaGTCACATACTCTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: CLCTTLKTGCSHTLKHILTLKTG*SHTLKH
Trigger: GTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGT...AAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR GCA 90 bp AGTCTTAACAAGAGGTTTGTGTTCTTCAATGTAGCACTTGTCTACCAGGCACTGCAAGGACTCATCTTTTaGTCATTTGTAACAAATCAC +
Preference number: 4 (lower is better)
Translates to: SLNKRFVFFNVALVYQALQGLIF*SFVTNH
Trigger: GTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTG...CAGTGCCTGGTAGACAAGTGCTACATTGAAGAACACAAACCTCTTGTTAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS GCA 90 bp GGGCCGGCGCCGGGAATTCAGGCCGCGTTCGCCGCCGCTTCCTGCTaGGCCAAGCGCGGGACACGTCACACCAGTGGCCCCGGAAATCGG +
Preference number: 5 (lower is better)
Translates to: GPAPGIQAAFAAASC*AKRGTRHTSGPGNR
Trigger: CCGATTTCCGGGGCCACTGGTGTGACGTGTCCCGCGCTTGGCGCAGCAGGAAGCGGCGGCGAACGCGGCCTGAATTCCCGGCGCCGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528744.5
ENST00000532259.1
CDS GCA 90 bp CTGGGGCCGGCGCCGGGAATTCAGGCCGCGTTCGCCGCCGCTTCCTaGTGCGCCAAGCGCGGGACACGTCACACCAGTGGCCCCGGAAAT +
Preference number: 5 (lower is better)
Translates to: LGPAPGIQAAFAAAS*CAKRGTRHTSGPGN
Trigger: ATTTCCGGGGCCACTGGTGTGACGTGTCCCGCGCTTGGCGCAGCAGGAAGCGGCGGCGAACGCGGCCTGAATTCCCGGCGCCGGCCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528744.5
ENST00000532259.1
CDS CCA 90 bp CGCCGCCGCTTCCTGCTGCGCCAAGCGCGGGACACGTCACACCAGTaGCCCCGGAAATCGGCTCAACCGTACTTCCGCTCAGAACGCCGG +
Preference number: 5 (lower is better)
Translates to: RRRFLLRQARDTSHQ*PRKSAQPYFRSERR
Trigger: CCGGCGTTCTGAGCGGAAGTACGGTTGAGCCGATTTCCGGGGCCACTGGTGTGACGTGTCCCGCGCTTGGCGCAGCAGGAAGCGGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532259.1
CDS TCA 90 bp CGCCCTGGAAGCACCAGAGCACAAGCCCGCCCTTGGAGAAAATGGTaGAGAAGTCGAGCATGGCGGCAGCGGCAGAGGAGCTGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: RPGSTRAQARPWRKW*RSRAWRQRQRSWGR
Trigger: CCGGCCCCAGCTCCTCTGCCGCTGCCGCCATGCTCGACTTCTTCACCATTTTCTCCAAGGGCGGGCTTGTGCTCTGGTGCTTCCAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS TCA 90 bp CTGCAGCAGCACGGAACGAATCAACGCGTTAACGGGTCCGGTGCATaGGTCGCTAACGCCCTGGAAGCACCAGAGCACAAGCCCGCCCTT +
Preference number: 5 (lower is better)
Translates to: LQQHGTNQRVNGSGA*VANALEAPEHKPAL
Trigger: AAGGGCGGGCTTGTGCTCTGGTGCTTCCAGGGCGTTAGCGACTCATGCACCGGACCCGTTAACGCGTTGATTCGTTCCGTGCTGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS-3UTR CAA 90 bp TTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGCCACAAGCCGGGGAAAGCGGCGATTaGGTATTGGGCAAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LQMAAVLNGEWGWKEPQAGESGD*VLGKSH
Trigger: GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCC...GGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS GCA 90 bp TCTGGAGGGTGTAGGGCACTCAAACGCCGGGTGTGTGTACGCAGCTaGTCCACGGCCCCAGCACGAAATGTATCACAGGCAGCAATGAGG +
Preference number: 5 (lower is better)
Translates to: SGGCRALKRRVCVRS*STAPARNVSQAAMR
Trigger: CCTCATTGCTGCCTGTGATACATTTCGTGCTGGGGCCGTGGAGCAGCTGCGTACACACACCCGGCGTTTGAGTGCCCTACACCCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000531104.1
ENST00000532259.1
CDS GCA 90 bp CGACGCTGTGGCTGCAGAATCTGCACCAGGGACTCCTGTAGGGCTTaGTTTACTGTGGAAGTCACCGCTGAAAGGGGAGGTGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: RRCGCRICTRDSCRA*FTVEVTAERGGGGG
Trigger: ACCTCCTCCACCTCCCCTTTCAGCGGTGACTTCCACAGTAAAGCAAGCCCTACAGGAGTCCCTGGTGCAGATTCTGCAGCCACAGCGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531104.1
CDS-3UTR CAA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGCCACCCAGTGTTCCCTaGGTCGCACTAGGTTTGGTA +
Preference number: 5 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMPPSVP*VALGLV
Trigger: TACCAAACCTAGTGCGACCAAGGGAACACTGGGTGG...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp ACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCACGCAGCCACCACAGCCTaGGCATTGAGGCTGCGTAGG +
Preference number: 5 (lower is better)
Translates to: TGRRACGESGDLVLGKSHAATTA*ALRLRR
Trigger: CCTACGCAGCCTCAATGCCAAGGCTGTGGTGGCTGC...GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGGAACGGGGAGTGGGGTaGGAAGGAGCCACAAGCCCC +
Preference number: 5 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQERGVG*EGATSP
Trigger: GGGGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTC...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS GCA 90 bp CGACGCTGTGGCTGCAGAATCTGCACCAGGGACTCCTGTAGGGCTTaGTTTACTGTGGAAGTCACCGTGCTGAACGTCCCCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: RRCGCRICTRDSCRA*FTVEVTVLNVPITF
Trigger: GAAGGTGATGGGGACGTTCAGCACGGTGACTTCCACAGTAAAGCAAGCCCTACAGGAGTCCCTGGTGCAGATTCTGCAGCCACAGCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS GCA 90 bp ACAGTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATTGTCTTaGATGCGGCCTGCCGTGTCCACCAGCACCACGTCAAAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: TVMSLARAVIRGALS*MRPAVSTSTTSKPW
Trigger: CCAAGGCTTTGACGTGGTGCTGGTGGACACGGCAGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS-3UTR CAA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGTGGTCCACGGCTTCATaGCCTACTAAGGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMWSTAS*PTKASP
Trigger: AGGAGAAGCCTTAGTAGGCAATGAAGCCGTGGACCA...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS GCA 90 bp TGGGCATCCATGATGTCCCGGAGCATGTCTACACGACGCTGTGGCTaGAGAATCTGCACCAGGGACTCCTGTAGGGCTTGCTTTACTGTG +
Preference number: 5 (lower is better)
Translates to: WASMMSRSMSTRRCG*RICTRDSCRACFTV
Trigger: CACAGTAAAGCAAGCCCTACAGGAGTCCCTGGTGCAGATTCTGCAGCCACAGCGTCGTGTAGACATGCTCCGGGACATCATGGATGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000531104.1
ENST00000532259.1
CDS GCA 90 bp CAGCAGCATCCTTGCCATAGCCCTTTTCAAACAACTGCACCATGGTaGGGCCACCATGCTTCTCTGGAGGGTGTAGGGCACTCAAACGCC +
Preference number: 5 (lower is better)
Translates to: QQHPCHSPFQTTAPW*GHHASLEGVGHSNA
Trigger: GGCGTTTGAGTGCCCTACACCCTCCAGAGAAGCATGGTGGCCGCACCATGGTGCAGTTGTTTGAAAAGGGCTATGGCAAGGATGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp TTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGCCACAAGCCTTCCCTTCCAACTTGTaGGCAACAGATTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: LQMAAVLNGEWGWKEPQAFPSNL*ATDSQS
Trigger: GCTCTGTGAATCTGTTGCCAACAAGTTGGAAGGGAA...GGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS GCA 90 bp AGGAAGCGCTGGAGCCAAGATTTCCTTGCAGCCTCAGCTCCTTTGTaGAGGACGCCCATTCCAGCCTCCAGTCTCACGTTTACCTTGTCA +
Preference number: 5 (lower is better)
Translates to: RKRWSQDFLAASAPL*RTPIPASSLTFTLS
Trigger: TGACAAGGTAAACGTGAGACTGGAGGCTGGAATGGGCGTCCTGCACAAAGGAGCTGAGGCTGCAAGGAAATCTTGGCTCCAGCGCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CCA 90 bp TGCCAGCAGCATCCTTGCCATAGCCCTTTTCAAACAACTGCACCATaGTGCGGCCACCATGCTTCTCTGGAGGGTGTAGGGCACTCAAAC +
Preference number: 5 (lower is better)
Translates to: CQQHPCHSPFQTTAP*CGHHASLEGVGHSN
Trigger: GTTTGAGTGCCCTACACCCTCCAGAGAAGCATGGTGGCCGCACCATGGTGCAGTTGTTTGAAAAGGGCTATGGCAAGGATGCTGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp TTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGCGGGTGTCATCCAGGGTCATCAGAGGGGCATaGTCTTGCATGCGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LAAINRQYTATVRRVSSRVIRGA*SCMRPA
Trigger: GGCAGGCCGCATGCAAGACAATGCCCCTCTGATGAC...CCTGGATGACACCCGCCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CAA 90 bp GGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGTCATCAGAGGGGCATaGTCTTGCATGCGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: GSDCNMIRPSLQMAAVLNVIRGA*SCMRPA
Trigger: GGCAGGCCGCATGCAAGACAATGCCCCTCTGATGAC...GTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS CCA 90 bp TTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTaGGCAAGAGCCACGTTAAGCCTTCATGAGGGCAGCCACCACAGC +
Preference number: 5 (lower is better)
Translates to: LIQEEGLVGKAAIWY*ARATLSLHEGSHHS
Trigger: GCTGTGGTGGCTGCCCTCATGAAGGCTTAACGTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS-3UTR CAA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATCTCTGTGCGGTACTaGTCCCGAAACAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQISVRY*SRNSRC
Trigger: GCATCGGCTGTTTCGGGACAAGTACCGCACAGAGAT...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp ACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCACGTCCCTCGAATCAGGTaGATGTCCTCAGACAAGGCA +
Preference number: 5 (lower is better)
Translates to: TGRRACGESGDLVLGKSHVPRIR*MSSDKA
Trigger: TGCCTTGTCTGAGGACATCAACCTGATTCGAGGGAC...GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGCCACCCAGTGTTCCCTaGGTCGCACTAGGTTTGGTA +
Preference number: 5 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQPPSVP*VALGLV
Trigger: TACCAAACCTAGTGCGACCAAGGGAACACTGGGTGG...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp AGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACGGGGAGTGGGGTTGGAAGGAGATAGCAGCTCCCACCTaGTCATCAATGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: RPSLQMAAVLNGEWGWKEIAAPT*SSMVSN
Trigger: ATTTGATACCATTGATGACAAGGTGGGAGCTGCTAT...CTCCTTCCAACCCCACTCCCCGTTCAGCACAGCCGCCATCTGCAAGGAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACACCACAGCCTTGGCATaGAGGCTGCGTAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: GSDCNMIRPSLQMAAVLNTTALA*RLRRSQ
Trigger: CTGTGACCTACGCAGCCTCAATGCCAAGGCTGTGGT...GTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS TCA 90 bp GACTTCGTGGACTTGTTGGACTTCTCCATACCCCTCCCATGCTTCTaGATGAACTCCTCGCGCTTCCTGCGGATCAGCTCCTCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: DFVDLLDFSIPLPCF*MNSSRFLRISSSLE
Trigger: TTCCAAAGAGGAGCTGATCCGCAGGAAGCGCGAGGAGTTCATTCAGAAGCATGGGAGGGGTATGGAGAAGTCCAACAAGTCCACGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTCTGCAGGGACTGGTTaGCTGGTAGCCAAAGGACCA +
Preference number: 5 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLSAGTG*LVAKGP
Trigger: TGGTCCTTTGGCTACCAGCAAACCAGTCCCTGCAGA...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp ACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCACTTTTGCCCTTCTCCTTaGGAGCATCTGACTTCGTGG +
Preference number: 5 (lower is better)
Translates to: TGRRACGESGDLVLGKSHFCPSP*EHLTSW
Trigger: CCACGAAGTCAGATGCTCCAAAGGAGAAGGGCAAAA...GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGCAGAGGGGCATTGTCTaGCATGCGGCCTGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: GCSHTLKHILDTGRRACGQRGIV*HAACRV
Trigger: GACACGGCAGGCCGCATGCAAGACAATGCCCCTCTG...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGGCAGCCACCACAGCCTaGGCATTGAGGCTGCGTAGG +
Preference number: 5 (lower is better)
Translates to: GCSHTLKHILDTGRRACGAATTA*ALRLRR
Trigger: CCTACGCAGCCTCAATGCCAAGGCTGTGGTGGCTGC...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS TCA 90 bp TCGTGGACTTGTTGGACTTCTCCATACCCCTCCCATGCTTCTGAATaGACTCCTCGCGCTTCCTGCGGATCAGCTCCTCTTTGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: SWTCWTSPYPSHASE*TPRASCGSAPLWKV
Trigger: AACTTTCCAAAGAGGAGCTGATCCGCAGGAAGCGCGAGGAGTTCATTCAGAAGCATGGGAGGGGTATGGAGAAGTCCAACAAGTCCACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS GCA 90 bp TACGTGCAAAAGCAATGGCTTCCATGGCAATGCCAGCAGCATCCTTaGCATAGCCCTTTTCAAACAACTGCACCATGGTGCGGCCACCAT +
Preference number: 5 (lower is better)
Translates to: YVQKQWLPWQCQQHP*HSPFQTTAPWCGHH
Trigger: ATGGTGGCCGCACCATGGTGCAGTTGTTTGAAAAGGGCTATGGCAAGGATGCTGCTGGCATTGCCATGGAAGCCATTGCTTTTGCACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS CCA 90 bp ACATTCTTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTaGTATTGGGCAAGAGCCACGTTAAGCCTTCATGAGGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: TFLIQEEGLVGKAAI*YWARATLSLHEGSH
Trigger: GTGGCTGCCCTCATGAAGGCTTAACGTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS-3UTR CAA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTATCTCTGTGCGGTACTaGTCCCGAAACAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSISVRY*SRNSRC
Trigger: GCATCGGCTGTTTCGGGACAAGTACCGCACAGAGAT...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGCGGATCAGCTCCTCTTaGGAAAGTTCTACTCCGTTC +
Preference number: 5 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQRISSS*ESSTPF
Trigger: GAACGGAGTAGAACTTTCCAAAGAGGAGCTGATCCG...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTAGGTTTGGTAGAGTTTaGAGCAGCCCCTTCGTCATC +
Preference number: 5 (lower is better)
Translates to: GSVGSDCNMIRPSLQMAARFGRV*SSPFVI
Trigger: GATGACGAAGGGGCTGCTCAAAACTCTACCAAACCT...AGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCAGAGGGGCATTGTCTaGCATGCGGCCTGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSQRGIV*HAACRV
Trigger: GACACGGCAGGCCGCATGCAAGACAATGCCCCTCTG...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS TCA 90 bp CTCTTTGGAAAGTTCTACTCCGTTCTCAGGACCCACTGGAAGACCTaGCTTTTCTGCAGGGACTGGTTTGCTGGTAGCCAAAGGACCATC +
Preference number: 5 (lower is better)
Translates to: LFGKFYSVLRTHWKT*LFCRDWFAGSQRTI
Trigger: GATGGTCCTTTGGCTACCAGCAAACCAGTCCCTGCAGAAAAGTCAGGTCTTCCAGTGGGTCCTGAGAACGGAGTAGAACTTTCCAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp AACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTTCATGGGTGAAGGAGTaGTTACCTCCCCGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: NLMQLGLIRLRRLLTTLISWVKE*LPPRSC
Trigger: GCAGGAACGGGGAGGTAACAACTCCTTCACCCATGA...AATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CAA 90 bp CTTACTTCTGGATTCTGGGAGTGGGAAGAGTTGGGAGGCCAAGAAGCCCAATGCACCTTCCCTTCCAACTaGTTGGCAACAGATTCACAG +
Preference number: 5 (lower is better)
Translates to: LTSGFWEWEELGGQEAQCTFPSN*LATDSQ
Trigger: CTGTGAATCTGTTGCCAACAAGTTGGAAGGGAAGGT...GCATTGGGCTTCTTGGCCTCCCAACTCTTCCCACTCCCAGAATCCAGAAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CAA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGACCACAGCCTTGGCATaGAGGCTGCGTAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: GLIRLRRLLTTLIISKALTTALA*RLRRSQ
Trigger: CTGTGACCTACGCAGCCTCAATGCCAAGGCTGTGGT...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTCCCCTCACTCTGCCTTaGTACTACACTGAAGACAGG +
Preference number: 5 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSPLTLP*YYTEDR
Trigger: CCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGG...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp ACAAGTCTTAACAAGAGGTTTGTGTTCTTCAATGTAGCACTTGTCTACCAGGCAGAACGGGGAGTGGGGTaGGAAGGAGCCACAAGCCCC +
Preference number: 5 (lower is better)
Translates to: TSLNKRFVFFNVALVYQAERGVG*EGATSP
Trigger: GGGGCTTGTGGCTCCTTCCAACCCCACTCCCCGTTC...TGCCTGGTAGACAAGTGCTACATTGAAGAACACAAACCTCTTGTTAAGACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CAA 90 bp GCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGAGGCTCAGACGGCTCTaGACCACACTAATTATTAGC +
Preference number: 5 (lower is better)
Translates to: AGRGSVGSDCNMIRPSLQRLRRL*TTLIIS
Trigger: GCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCT...CTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCCTCTCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GTAGGAAGGGGGAGGCCCGCTGGGAGAGGGTCAGTGGGCAGTGATTGTAACATGGCAAGGACTCATCTTTaGCTCATTTGTAACAAATCA +
Preference number: 5 (lower is better)
Translates to: VGRGRPAGRGSVGSDCNMARTHL*LICNKS
Trigger: TGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGC...CATGTTACAATCACTGCCCACTGACCCTCTCCCAGCGGGCCTCCCCCTTCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS TCA 90 bp CATCTTGTCCAGCACAGATTCCATGTCTTCACGACTCAAGCTCTTTaGACCCACAAGGCCCTTCAGCATACCAAACATGCCACCCAGTGT +
Preference number: 5 (lower is better)
Translates to: HLVQHRFHVFTTQAL*THKALQHTKHATQC
Trigger: ACACTGGGTGGCATGTTTGGTATGCTGAAGGGCCTTGTGGGTTCAAAGAGCTTGAGTCGTGAAGACATGGAATCTGTGCTGGACAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS-3UTR CAA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGTCTGCAGGGACTGGTTaGCTGGTAGCCAAAGGACCA +
Preference number: 5 (lower is better)
Translates to: GLIRLRRLLTTLIISKALSAGTG*LVAKGP
Trigger: TGGTCCTTTGGCTACCAGCAAACCAGTCCCTGCAGA...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CTGGAAGAGTCTCTTAACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTCCCTTCCAACTTGTaGGCAACAGATTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: LEESLNLMQLGLIRLRRLFPSNL*ATDSQS
Trigger: GCTCTGTGAATCTGTTGCCAACAAGTTGGAAGGGAA...GAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTTAAGAGACTCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp AACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTTGGTCCACGGCTTCATaGCCTACTAAGGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: NLMQLGLIRLRRLLTTLIWSTAS*PTKASP
Trigger: AGGAGAAGCCTTAGTAGGCAATGAAGCCGTGGACCA...AATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp ACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCACATAGCAGCTCCCACCTaGTCATCAATGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: TGRRACGESGDLVLGKSHIAAPT*SSMVSN
Trigger: ATTTGATACCATTGATGACAAGGTGGGAGCTGCTAT...GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAATGATTAGGCCTTCCTaGCAGATGGCGGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: QLGLIRLRRLLTTLIISKMIRPS*QMAAVL
Trigger: CAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCAT...TTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS TCA 90 bp CGTCAAAGCCTTGGTTACGTGCTAGAGAAAGAAAGTAGTCAACTCTaGACACCTGGACTACCACTCATGCTCGTTCCCAGCTTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RQSLGYVLEKESSQL*TPGLPLMLVPSFLS
Trigger: TGAGAGGAAGCTGGGAACGAGCATGAGTGGTAGTCCAGGTGTTCAGAGTTGACTACTTTCTTTCTCTAGCACGTAACCAAGGCTTTGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS-3UTR CAA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGGACTTCGTGGACTTGTaGGACTTCTCCATACCCCTC +
Preference number: 5 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTEDFVDL*DFSIPL
Trigger: GAGGGGTATGGAGAAGTCCAACAAGTCCACGAAGTC...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp AACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTTTTTGCCCTTCTCCTTaGGAGCATCTGACTTCGTGG +
Preference number: 5 (lower is better)
Translates to: NLMQLGLIRLRRLLTTLIFCPSP*EHLTSW
Trigger: CCACGAAGTCAGATGCTCCAAAGGAGAAGGGCAAAA...AATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGCACGACTCAAGCTCTTaGAACCCACAAGGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: GCSHTLKHILDTGRRACGHDSSS*NPQGPS
Trigger: TGAAGGGCCTTGTGGGTTCAAAGAGCTTGAGTCGTG...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTCACCACGTCAAAGCCTaGGTTACGTGCAAAAGCAAT +
Preference number: 5 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSHHVKA*VTCKSN
Trigger: ATTGCTTTTGCACGTAACCAAGGCTTTGACGTGGTG...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGGTCAGTGGGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTACAAAGACGATGGGTTaGCTTGTGATGTACGTCATA +
Preference number: 5 (lower is better)
Translates to: GSVGSDCNMIRPSLQMAATKTMG*LVMYVI
Trigger: TATGACGTACATCACAAGCAAACCCATCGTCTTTGT...AGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCCCACTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGGGGAAAGCGGCGATTaGGTATTGGGCAAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTGESGD*VLGKSH
Trigger: GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCC...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGCCCCTCACTCTGCCTTaGTACTACACTGAAGACAGG +
Preference number: 5 (lower is better)
Translates to: GCSHTLKHILDTGRRACGPLTLP*YYTEDR
Trigger: CCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGG...CCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp ATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGGGGGTGCCTAGCAAAGCTCTGGTGTaGGGTTCCAACCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: IGQSCNKTESVGRVKGVPSKALV*GSNHWS
Trigger: TGACCAATGGTTGGAACCCAACACCAGAGCTTTGCT...AGGCACCCCCTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAAGCACAAGCCCGCCCTaGGAGAAAATGGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LWCWVPTIGQSCNKTESVSTSPP*EKMVKK
Trigger: CTTCTTCACCATTTTCTCCAAGGGCGGGCTTGTGCT...TACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGCAGTGATTGTAACATGATTAGGCCTTCCTTGCAGATGGCGGCTGTGCTGAACACCAGCTCAAACTGGTaGTCCAGTTTATACTTGAGT +
Preference number: 5 (lower is better)
Translates to: GSDCNMIRPSLQMAAVLNTSSNW*SSLYLS
Trigger: ACTCAAGTATAAACTGGACAACCAGTTTGAGCTGGT...GTTCAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCATGTTACAATCACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CAA 90 bp CTGAGGGAAGCAAGGACTCATCTTTTGCTCATTTGTAACAAATCACTCCAGCCTGACTTCGTGGACTTGTaGGACTTCTCCATACCCCTC +
Preference number: 5 (lower is better)
Translates to: LREARTHLLLICNKSLQPDFVDL*DFSIPL
Trigger: GAGGGGTATGGAGAAGTCCAACAAGTCCACGAAGTC...AGGCTGGAGTGATTTGTTACAAATGAGCAAAAGATGAGTCCTTGCTTCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CAA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTACCCGGGGTGCTTTTTaGCCCTTCTCCTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTTRGAF*PFSFGA
Trigger: TGCTCCAAAGGAGAAGGGCAAAAAAGCACCCCGGGT...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTGTCCCTCGAATCAGGTaGATGTCCTCAGACAAGGCA +
Preference number: 5 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSVPRIR*MSSDKA
Trigger: TGCCTTGTCTGAGGACATCAACCTGATTCGAGGGAC...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATAGGTTTGGTAGAGTTTaGAGCAGCCCCTTCGTCATC +
Preference number: 5 (lower is better)
Translates to: RLLTTLIISKALVLGSNHRFGRV*SSPFVI
Trigger: GATGACGAAGGGGCTGCTCAAAACTCTACCAAACCT...ATGGTTGGAACCCAACACCAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp ACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCACAACCAGAAGGAAATCTaGGCAAGATTAGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: TGRRACGESGDLVLGKSHNQKEI*ARLVDF
Trigger: GAAATCTACTAATCTTGCCAAGATTTCCTTCTGGTT...GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp TTAGCAGCAATTAACAGGCAATACACTGCCACAGTGAGGCGGGTGTCATCCAGGACAAAGACGATGGGTTaGCTTGTGATGTACGTCATA +
Preference number: 5 (lower is better)
Translates to: LAAINRQYTATVRRVSSRTKTMG*LVMYVI
Trigger: TATGACGTACATCACAAGCAAACCCATCGTCTTTGT...CCTGGATGACACCCGCCTCACTGTGGCAGTGTATTGCCTGTTAATTGCTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CAA 90 bp GTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGAGCGGCGATTTGGTATaGGGCAAGAGCCACGTTAAG +
Preference number: 5 (lower is better)
Translates to: VPTIGQSCNKTESVGRVKSGDLV*GKSHVK
Trigger: CTTAACGTGGCTCTTGCCCAATACCAAATCGCCGCT...CTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGATGATTAGGCCTTCCTaGCAGATGGCGGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LKTGCSHTLKHILDTGRRMIRPS*QMAAVL
Trigger: CAGCACAGCCGCCATCTGCAAGGAAGGCCTAATCAT...CCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS TCA 90 bp GTATCAAATTTGGTAAGAACAATGCCATCAATGAGCCGAGGTGTCTaGGCCATAGAATGGTCAGCCAAGGCTCTGTTGAACTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: VSNLVRTMPSMSRGV*AIEWSAKALLNLTS
Trigger: GCTGGTCAAGTTCAACAGAGCCTTGGCTGACCATTCTATGGCTCAGACACCTCGGCTCATTGATGGCATTGTTCTTACCAAATTTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS GCA 90 bp CTTTGCTGTTGGATCTCTGTGCGGTACTTGTCCCGAAACAGCCGATaGACGTCATCTATCAATTTGTCTACATATGTCAGTGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: LCCWISVRYLSRNSR*TSSINLSTYVSVRI
Trigger: GATCCTGACACTGACATATGTAGACAAATTGATAGATGACGTGCATCGGCTGTTTCGGGACAAGTACCGCACAGAGATCCAACAGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS-3UTR CAA 90 bp ACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAACCCGGGGTGCTTTTTaGCCCTTCTCCTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: TTLKTGCSHTLKHILDTGTRGAF*PFSFGA
Trigger: TGCTCCAAAGGAGAAGGGCAAAAAAGCACCCCGGGT...TCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGACCTTCCCTTCCAACTaGTTGGCAACAGATTCACAG +
Preference number: 5 (lower is better)
Translates to: AKLWCWVPTIGQSCNKTETFPSN*LATDSQ
Trigger: CTGTGAATCTGTTGCCAACAAGTTGGAAGGGAAGGT...CTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp AGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTACCAAATCAGGTGTATaGACAGTAATGAGTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SPLTLPLYYTEDRLLTYSTKSGV*TVMSLA
Trigger: GGCCAAACTCATTACTGTCAATACACCTGATTTGGT...AGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp TTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTAGCGGCGATTTGGTATaGGGCAAGAGCCACGTTAAG +
Preference number: 5 (lower is better)
Translates to: LAKLWCWVPTIGQSCNKTSGDLV*GKSHVK
Trigger: CTTAACGTGGCTCTTGCCCAATACCAAATCGCCGCT...AGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTCTGTAGGCAGAGTGAAGAGCAAAGCTCTGGTGTaGGGTTCCAACCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: VPTIGQSCNKTESVGRVKSKALV*GSNHWS
Trigger: TGACCAATGGTTGGAACCCAACACCAGAGCTTTGCT...CTTCACTCTGCCTACAGACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGAGGCTCAGACGGCTCTaGACCACACTAATTATTAGC +
Preference number: 5 (lower is better)
Translates to: GLIRLRRLLTTLIISKALRLRRL*TTLIIS
Trigger: GCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCT...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp AACCTAATGCAGCTGGGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTACCAAATCAGGTGTATaGACAGTAATGAGTTTGGCC +
Preference number: 5 (lower is better)
Translates to: NLMQLGLIRLRRLLTTLITKSGV*TVMSLA
Trigger: GGCCAAACTCATTACTGTCAATACACCTGATTTGGT...AATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCCCAGCTGCATTAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp TGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTCGGATCAGCTCCTCTTaGGAAAGTTCTACTCCGTTC +
Preference number: 5 (lower is better)
Translates to: CLCTTLKTGCSHTLKHILRISSS*ESSTPF
Trigger: GAACGGAGTAGAACTTTCCAAAGAGGAGCTGATCCG...AAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp GGACTCATTAGGCTCAGACGGCTCTTGACCACACTAATTATTAGCAAAGCTCTGGTTGGGTTCCAACCATaGGTCAAAGCTGTAATAAGA +
Preference number: 5 (lower is better)
Translates to: GLIRLRRLLTTLIISKALVGFQP*VKAVIR
Trigger: TCTTATTACAGCTTTGACCAATGGTTGGAACCCAAC...CAGAGCTTTGCTAATAATTAGTGTGGTCAAGAGCCGTCTGAGCCTAATGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp CAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGACTGAGTGTTGGGTTCCAACCATaGGTCAAAGCTGTAATAAGA +
Preference number: 5 (lower is better)
Translates to: QSSGVGFQPLVKAVIRLSVGFQP*VKAVIR
Trigger: TCTTATTACAGCTTTGACCAATGGTTGGAACCCAAC...ACTCAGTCTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS GCA 90 bp AAGTGCCATTTAATAAACTTAAAGCACTTTGCTGTTGGATCTCTGTaGGGTACTTGTCCCGAAACAGCCGATGCACGTCATCTATCAATT +
Preference number: 5 (lower is better)
Translates to: KCHLINLKHFAVGSL*GTCPETADARHLSI
Trigger: AATTGATAGATGACGTGCATCGGCTGTTTCGGGACAAGTACCGCACAGAGATCCAACAGCAAAGTGCTTTAAGTTTATTAAATGGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS-3UTR CAA 90 bp TATTGCACTAATAGCACATCTGTAATATCAAGCTACAGGACAAGTCTTAACAAGAGCACAAGCCCGCCCTaGGAGAAAATGGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: YCTNSTSVISSYRTSLNKSTSPP*EKMVKK
Trigger: CTTCTTCACCATTTTCTCCAAGGGCGGGCTTGTGCT...CTTGTTAAGACTTGTCCTGTAGCTTGATATTACAGATGTGCTATTAGTGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS-3UTR CAA 90 bp TATTGCACTAATAGCACATCTGTAATATCAAGCTACAGGACAAGTCTTAACAAGCACGACTCAAGCTCTTaGAACCCACAAGGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: YCTNSTSVISSYRTSLNKHDSSS*NPQGPS
Trigger: TGAAGGGCCTTGTGGGTTCAAAGAGCTTGAGTCGTG...CTTGTTAAGACTTGTCCTGTAGCTTGATATTACAGATGTGCTATTAGTGCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332118.11
CDS TCA 90 bp TGTCTTGGGCTCTGGATTTGGTTCCAAGGTAATGTGAGAAAAACTTaGTTATATGCTTGGCCATCACCAAACATATTCAGGAAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: CLGLWIWFQGNVRKT*LYAWPSPNIFRKRR
Trigger: CCTCCTTTTCCTGAATATGTTTGGTGATGGCCAAGCATATAATCAAGTTTTTCTCACATTACCTTGGAACCAAATCCAGAGCCCAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS TCA 90 bp TACCTGTTCACTGTCTTGGGCTCTGGATTTGGTTCCAAGGTAATGTaGGAAAAACTTGATTATATGCTTGGCCATCACCAAACATATTCA +
Preference number: 5 (lower is better)
Translates to: YLFTVLGSGFGSKVM*EKLDYMLGHHQTYS
Trigger: TGAATATGTTTGGTGATGGCCAAGCATATAATCAAGTTTTTCTCACATTACCTTGGAACCAAATCCAGAGCCCAAGACAGTGAACAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS-3UTR CAA 90 bp TGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTACGTCATCTATCAATTaGTCTACATATGTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: CLCTTLKTGCSHTLKHILTSSIN*STYVSV
Trigger: GACACTGACATATGTAGACAAATTGATAGATGACGT...AAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS-3UTR CAA 90 bp TTATTAGCAAAGCTCTGGTGTTGGGTTCCAACCATTGGTCAAAGCTGTAATAAGAACCAGAAGGAAATCTaGGCAAGATTAGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: LLAKLWCWVPTIGQSCNKNQKEI*ARLVDF
Trigger: GAAATCTACTAATCTTGCCAAGATTTCCTTCTGGTT...CTTATTACAGCTTTGACCAATGGTTGGAACCCAACACCAGAGCTTTGCTAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS GCA 72 bp GCGCCGGGAATTCAGGCCGCGTTCGCCGCCGCTTCCTaGTGCGCCAAGCGCGGGACACGTCACACCAGTGGC +
Preference number: 6 (lower is better)
Translates to: APGIQAAFAAAS*CAKRGTRHTSG
Trigger: GCCACTGGTGTGACGTGTCCCGCGCTTGGCGCAGCAGGAAGCGGCGGCGAACGCGGCCTGAATTCCCGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528744.5
ENST00000532259.1
CDS TCA 72 bp AGACGGCCACCTAGAGCATTGGGCGGGGCAGAGCCCTaGGGGCCGCTGGCCAATTGGCGCGCTCGTCTGAAT +
Preference number: 6 (lower is better)
Translates to: RRPPRALGGAEP*GPLANWRARLN
Trigger: ATTCAGACGAGCGCGCCAATTGGCCAGCGGCCCTCAGGGCTCTGCCCCGCCCAATGCTCTAGGTGGCCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530680.1
CDS CCA 72 bp TTCCTGCTGCGCCAAGCGCGGGACACGTCACACCAGTaGCCCCGGAAATCGGCTCAACCGTACTTCCGCTCA +
Preference number: 6 (lower is better)
Translates to: FLLRQARDTSHQ*PRKSAQPYFRS
Trigger: TGAGCGGAAGTACGGTTGAGCCGATTTCCGGGGCCACTGGTGTGACGTGTCCCGCGCTTGGCGCAGCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532259.1
CDS TCA 72 bp AGCACCAGAGCACAAGCCCGCCCTTGGAGAAAATGGTaGAGAAGTCGAGCATGGCGGCAGCGGCAGAGGAGC +
Preference number: 6 (lower is better)
Translates to: STRAQARPWRKW*RSRAWRQRQRS
Trigger: GCTCCTCTGCCGCTGCCGCCATGCTCGACTTCTTCACCATTTTCTCCAAGGGCGGGCTTGTGCTCTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS GCA 72 bp TGTAGGGCACTCAAACGCCGGGTGTGTGTACGCAGCTaGTCCACGGCCCCAGCACGAAATGTATCACAGGCA +
Preference number: 6 (lower is better)
Translates to: CRALKRRVCVRS*STAPARNVSQA
Trigger: TGCCTGTGATACATTTCGTGCTGGGGCCGTGGAGCAGCTGCGTACACACACCCGGCGTTTGAGTGCCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000531104.1
ENST00000532259.1
CDS CAA 72 bp GTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATaGTCTTGCATGCGGCCTGCCGTGTCCACCAGCACC +
Preference number: 6 (lower is better)
Translates to: VMSLARAVIRGA*SCMRPAVSTST
Trigger: GGTGCTGGTGGACACGGCAGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS CAA 72 bp CGCTGGAGCCAAGATTTCCTTGCAGCCTCAGCTCCTTaGTGCAGGACGCCCATTCCAGCCTCCAGTCTCACG +
Preference number: 6 (lower is better)
Translates to: RWSQDFLAASAP*CRTPIPASSLT
Trigger: CGTGAGACTGGAGGCTGGAATGGGCGTCCTGCACAAAGGAGCTGAGGCTGCAAGGAAATCTTGGCTCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CAA 90 bp GACAGTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATTGTCTaGCATGCGGCCTGCCGTGTCCACCAGCACCACGTCAAAGCCTTG +
Preference number: 6 (lower is better)
Translates to: DSNEFGQGSHQRGIV*HAACRVHQHHVKAL
Trigger: CAAGGCTTTGACGTGGTGCTGGTGGACACGGCAGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS TCA 72 bp CACGGAACGAATCAACGCGTTAACGGGTCCGGTGCATaGGTCGCTAACGCCCTGGAAGCACCAGAGCACAAG +
Preference number: 6 (lower is better)
Translates to: HGTNQRVNGSGA*VANALEAPEHK
Trigger: CTTGTGCTCTGGTGCTTCCAGGGCGTTAGCGACTCATGCACCGGACCCGTTAACGCGTTGATTCGTTCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS GCA 72 bp ATGATGTCCCGGAGCATGTCTACACGACGCTGTGGCTaGAGAATCTGCACCAGGGACTCCTGTAGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: MMSRSMSTRRCG*RICTRDSCRAC
Trigger: GCAAGCCCTACAGGAGTCCCTGGTGCAGATTCTGCAGCCACAGCGTCGTGTAGACATGCTCCGGGACATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000531104.1
ENST00000532259.1
CDS GCA 72 bp TCTCAGGAACAGGAAGCGCTGGAGCCAAGATTTCCTTaGAGCCTCAGCTCCTTTGTGCAGGACGCCCATTCC +
Preference number: 6 (lower is better)
Translates to: SQEQEALEPRFP*SLSSFVQDAHS
Trigger: GGAATGGGCGTCCTGCACAAAGGAGCTGAGGCTGCAAGGAAATCTTGGCTCCAGCGCTTCCTGTTCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CCA 72 bp TCTGCACCAGGGACTCCTGTAGGGCTTGCTTTACTGTaGAAGTCACCGCTGAAAGGGGAGGTGGAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: SAPGTPVGLALL*KSPLKGEVEEV
Trigger: AACCTCCTCCACCTCCCCTTTCAGCGGTGACTTCCACAGTAAAGCAAGCCCTACAGGAGTCCCTGGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531104.1
CDS CAA 72 bp CTCTCAGGAACAGGAAGCGCTGGAGCCAAGATTTCCTaGCAGCCTCAGCTCCTTTGTGCAGGACGCCCATTC +
Preference number: 6 (lower is better)
Translates to: LSGTGSAGAKIS*QPQLLCAGRPF
Trigger: GAATGGGCGTCCTGCACAAAGGAGCTGAGGCTGCAAGGAAATCTTGGCTCCAGCGCTTCCTGTTCCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CAA 90 bp GTGGAAGTCACCGTGCTGAACGTCCCCATCACCTTCCCTTCCAACTaGTTGGCAACAGATTCACAGAGCTGGACGGCAATGTCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: VEVTVLNVPITFPSN*LATDSQSWTAMSAA
Trigger: GGCTGCAGACATTGCCGTCCAGCTCTGTGAATCTGTTGCCAACAAGTTGGAAGGGAAGGTGATGGGGACGTTCAGCACGGTGACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS CAA 90 bp GTATTGACAGTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATaGTCTTGCATGCGGCCTGCCGTGTCCACCAGCACCACGTCAAAG +
Preference number: 6 (lower is better)
Translates to: VLTVMSLARAVIRGA*SCMRPAVSTSTTSK
Trigger: CTTTGACGTGGTGCTGGTGGACACGGCAGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTACTGTCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS CAA 90 bp AACAGGAAGCGCTGGAGCCAAGATTTCCTTGCAGCCTCAGCTCCTTaGTGCAGGACGCCCATTCCAGCCTCCAGTCTCACGTTTACCTTG +
Preference number: 6 (lower is better)
Translates to: NRKRWSQDFLAASAP*CRTPIPASSLTFTL
Trigger: CAAGGTAAACGTGAGACTGGAGGCTGGAATGGGCGTCCTGCACAAAGGAGCTGAGGCTGCAAGGAAATCTTGGCTCCAGCGCTTCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS TCA 72 bp GACTTGTTGGACTTCTCCATACCCCTCCCATGCTTCTaGATGAACTCCTCGCGCTTCCTGCGGATCAGCTCC +
Preference number: 6 (lower is better)
Translates to: DLLDFSIPLPCF*MNSSRFLRISS
Trigger: GGAGCTGATCCGCAGGAAGCGCGAGGAGTTCATTCAGAAGCATGGGAGGGGTATGGAGAAGTCCAACAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS GCA 72 bp TGGAGCCAAGATTTCCTTGCAGCCTCAGCTCCTTTGTaGAGGACGCCCATTCCAGCCTCCAGTCTCACGTTT +
Preference number: 6 (lower is better)
Translates to: WSQDFLAASAPL*RTPIPASSLTF
Trigger: AAACGTGAGACTGGAGGCTGGAATGGGCGTCCTGCACAAAGGAGCTGAGGCTGCAAGGAAATCTTGGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CCA 72 bp CATCCTTGCCATAGCCCTTTTCAAACAACTGCACCATaGTGCGGCCACCATGCTTCTCTGGAGGGTGTAGGG +
Preference number: 6 (lower is better)
Translates to: HPCHSPFQTTAP*CGHHASLEGVG
Trigger: CCCTACACCCTCCAGAGAAGCATGGTGGCCGCACCATGGTGCAGTTGTTTGAAAAGGGCTATGGCAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS CCA 72 bp GAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTaGGCAAGAGCCACGTTAAGCCTTCATGAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: EEGLVGKAAIWY*ARATLSLHEGS
Trigger: GCTGCCCTCATGAAGGCTTAACGTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS TCA 72 bp TGTTGGACTTCTCCATACCCCTCCCATGCTTCTGAATaGACTCCTCGCGCTTCCTGCGGATCAGCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: CWTSPYPSHASE*TPRASCGSAPL
Trigger: AAGAGGAGCTGATCCGCAGGAAGCGCGAGGAGTTCATTCAGAAGCATGGGAGGGGTATGGAGAAGTCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS CAA 72 bp ATGAACTCCTCGCGCTTCCTGCGGATCAGCTCCTCTTaGGAAAGTTCTACTCCGTTCTCAGGACCCACTGGA +
Preference number: 6 (lower is better)
Translates to: MNSSRFLRISSS*ESSTPFSGPTG
Trigger: TCCAGTGGGTCCTGAGAACGGAGTAGAACTTTCCAAAGAGGAGCTGATCCGCAGGAAGCGCGAGGAGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS CAA 72 bp CAGTGTTCCCTTGGTCGCACTAGGTTTGGTAGAGTTTaGAGCAGCCCCTTCGTCATCAGAGCTGCTGCAGTC +
Preference number: 6 (lower is better)
Translates to: QCSLGRTRFGRV*SSPFVIRAAAV
Trigger: GACTGCAGCAGCTCTGATGACGAAGGGGCTGCTCAAAACTCTACCAAACCTAGTGCGACCAAGGGAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS CAA 72 bp TTATACTTGAGTGTGAGTGCCTCATGGGTGAAGGAGTaGTTACCTCCCCGTTCCTGCAGCAGCACGGAACGA +
Preference number: 6 (lower is better)
Translates to: LYLSVSASWVKE*LPPRSCSSTER
Trigger: TCGTTCCGTGCTGCTGCAGGAACGGGGAGGTAACAACTCCTTCACCCATGAGGCACTCACACTCAAGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
CDS CAA 72 bp CCCACTGGAAGACCTGACTTTTCTGCAGGGACTGGTTaGCTGGTAGCCAAAGGACCATCAGAACCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: PTGRPDFSAGTG*LVAKGPSEPSF
Trigger: GAAGGAAGGTTCTGATGGTCCTTTGGCTACCAGCAAACCAGTCCCTGCAGAAAAGTCAGGTCTTCCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS CAA 90 bp GCATCTTGTCCAGCACAGATTCCATGTCTTCACGACTCAAGCTCTTaGAACCCACAAGGCCCTTCAGCATACCAAACATGCCACCCAGTG +
Preference number: 6 (lower is better)
Translates to: ASCPAQIPCLHDSSS*NPQGPSAYQTCHPV
Trigger: CACTGGGTGGCATGTTTGGTATGCTGAAGGGCCTTGTGGGTTCAAAGAGCTTGAGTCGTGAAGACATGGAATCTGTGCTGGACAAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS TCA 72 bp AAGTTCTACTCCGTTCTCAGGACCCACTGGAAGACCTaGCTTTTCTGCAGGGACTGGTTTGCTGGTAGCCAA +
Preference number: 6 (lower is better)
Translates to: KFYSVLRTHWKT*LFCRDWFAGSQ
Trigger: TTGGCTACCAGCAAACCAGTCCCTGCAGAAAAGTCAGGTCTTCCAGTGGGTCCTGAGAACGGAGTAGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS CCA 72 bp ATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTaGTATTGGGCAAGAGCCACGTTAAGCCTTCATGAG +
Preference number: 6 (lower is better)
Translates to: IQEEGLVGKAAI*YWARATLSLHE
Trigger: CTCATGAAGGCTTAACGTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS TCA 72 bp CAGCACAGATTCCATGTCTTCACGACTCAAGCTCTTTaGACCCACAAGGCCCTTCAGCATACCAAACATGCC +
Preference number: 6 (lower is better)
Translates to: QHRFHVFTTQAL*THKALQHTKHA
Trigger: GGCATGTTTGGTATGCTGAAGGGCCTTGTGGGTTCAAAGAGCTTGAGTCGTGAAGACATGGAATCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS GCA 72 bp GTTGGCAACAGATTCACAGAGCTGGACGGCAATGTCTaGAGCCACGTTCTTAGCAATGAGATGATCACGCAT +
Preference number: 6 (lower is better)
Translates to: VGNRFTELDGNV*SHVLSNEMITH
Trigger: ATGCGTGATCATCTCATTGCTAAGAACGTGGCTGCAGACATTGCCGTCCAGCTCTGTGAATCTGTTGCCAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS CCA 72 bp TTCCCTTCCAACTTGTTGGCAACAGATTCACAGAGCTaGACGGCAATGTCTGCAGCCACGTTCTTAGCAATG +
Preference number: 6 (lower is better)
Translates to: FPSNLLATDSQS*TAMSAATFLAM
Trigger: CATTGCTAAGAACGTGGCTGCAGACATTGCCGTCCAGCTCTGTGAATCTGTTGCCAACAAGTTGGAAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS CCA 72 bp CAAAGCCTTGGTTACGTGCAAAAGCAATGGCTTCCATaGCAATGCCAGCAGCATCCTTGCCATAGCCCTTTT +
Preference number: 6 (lower is better)
Translates to: QSLGYVQKQWLP*QCQQHPCHSPF
Trigger: AAAAGGGCTATGGCAAGGATGCTGCTGGCATTGCCATGGAAGCCATTGCTTTTGCACGTAACCAAGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332118.11
ENST00000532259.1
CDS CAA 72 bp CCAGCACAGATTCCATGTCTTCACGACTCAAGCTCTTaGAACCCACAAGGCCCTTCAGCATACCAAACATGC +
Preference number: 6 (lower is better)
Translates to: PAQIPCLHDSSS*NPQGPSAYQTC
Trigger: GCATGTTTGGTATGCTGAAGGGCCTTGTGGGTTCAAAGAGCTTGAGTCGTGAAGACATGGAATCTGTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000527817.1
ENST00000532259.1
CDS CAA 72 bp GCTCTGTTGAACTTGACCAGCTGGTCCACGGCTTCATaGCCTACTAAGGCTTCTCCTACAAACAGCACCAAA +
Preference number: 6 (lower is better)
Translates to: ALLNLTSWSTAS*PTKASPTNSTK
Trigger: TTTGGTGCTGTTTGTAGGAGAAGCCTTAGTAGGCAATGAAGCCGTGGACCAGCTGGTCAAGTTCAACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS CAA 90 bp CTACCACTCATGCTCGTTCCCAGCTTCCTCTCAAAAAGTCCTAGTTaGACTACCTGTTCACTGTCTTGGGCTCTGGATTTGGTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: LPLMLVPSFLSKSPS*TTCSLSWALDLVPR
Trigger: CCTTGGAACCAAATCCAGAGCCCAAGACAGTGAACAGGTAGTCAAACTAGGACTTTTTGAGAGGAAGCTGGGAACGAGCATGAGTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS TCA 72 bp TTGGTAAGAACAATGCCATCAATGAGCCGAGGTGTCTaGGCCATAGAATGGTCAGCCAAGGCTCTGTTGAAC +
Preference number: 6 (lower is better)
Translates to: LVRTMPSMSRGV*AIEWSAKALLN
Trigger: GTTCAACAGAGCCTTGGCTGACCATTCTATGGCTCAGACACCTCGGCTCATTGATGGCATTGTTCTTACCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS TCA 72 bp CTTGGTTACGTGCTAGAGAAAGAAAGTAGTCAACTCTaGACACCTGGACTACCACTCATGCTCGTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: LGYVLEKESSQL*TPGLPLMLVPS
Trigger: GCTGGGAACGAGCATGAGTGGTAGTCCAGGTGTTCAGAGTTGACTACTTTCTTTCTCTAGCACGTAACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CAA 90 bp AAACCAACCACAAACACCAGCTCAAACTGGTTGTCCAGTTTATACTaGAGTGTGAGTGCCTCATGGGTGAAGGAGTTGTTACCTCCCCGT +
Preference number: 6 (lower is better)
Translates to: KPTTNTSSNWLSSLY*SVSASWVKELLPPR
Trigger: ACGGGGAGGTAACAACTCCTTCACCCATGAGGCACTCACACTCAAGTATAAACTGGACAACCAGTTTGAGCTGGTGTTTGTGGTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
CDS CAA 90 bp TTGCCTACTAAGGCTTCTCCTACAAACAGCACCAAATCAGGTGTATaGACAGTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATTG +
Preference number: 6 (lower is better)
Translates to: LPTKASPTNSTKSGV*TVMSLARAVIRGAL
Trigger: CAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTACTGTCAATACACCTGATTTGGTGCTGTTTGTAGGAGAAGCCTTAGTAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332118.11
ENST00000532259.1
ENST00000532268.1
CDS CAA 72 bp CTTAAAGCACTTTGCTGTTGGATCTCTGTGCGGTACTaGTCCCGAAACAGCCGATGCACGTCATCTATCAAT +
Preference number: 6 (lower is better)
Translates to: LKALCCWISVRY*SRNSRCTSSIN
Trigger: ATTGATAGATGACGTGCATCGGCTGTTTCGGGACAAGTACCGCACAGAGATCCAACAGCAAAGTGCTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS CAA 72 bp ATGCTCGTTCCCAGCTTCCTCTCAAAAAGTCCTAGTTaGACTACCTGTTCACTGTCTTGGGCTCTGGATTTG +
Preference number: 6 (lower is better)
Translates to: MLVPSFLSKSPS*TTCSLSWALDL
Trigger: CAAATCCAGAGCCCAAGACAGTGAACAGGTAGTCAAACTAGGACTTTTTGAGAGGAAGCTGGGAACGAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CAA 90 bp CCTTTGTGCAGGACGCCCATTCCAGCCTCCAGTCTCACGTTTACCTaGTCATCAATGGTATCAAATTTGGTAAGAACAATGCCATCAATG +
Preference number: 6 (lower is better)
Translates to: PLCRTPIPASSLTFT*SSMVSNLVRTMPSM
Trigger: CATTGATGGCATTGTTCTTACCAAATTTGATACCATTGATGACAAGGTAAACGTGAGACTGGAGGCTGGAATGGGCGTCCTGCACAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS GCA 72 bp TGGATCTCTGTGCGGTACTTGTCCCGAAACAGCCGATaGACGTCATCTATCAATTTGTCTACATATGTCAGT +
Preference number: 6 (lower is better)
Translates to: WISVRYLSRNSR*TSSINLSTYVS
Trigger: ACTGACATATGTAGACAAATTGATAGATGACGTGCATCGGCTGTTTCGGGACAAGTACCGCACAGAGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS GCA 72 bp TTAATAAACTTAAAGCACTTTGCTGTTGGATCTCTGTaGGGTACTTGTCCCGAAACAGCCGATGCACGTCAT +
Preference number: 6 (lower is better)
Translates to: LINLKHFAVGSL*GTCPETADARH
Trigger: ATGACGTGCATCGGCTGTTTCGGGACAAGTACCGCACAGAGATCCAACAGCAAAGTGCTTTAAGTTTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS CAA 72 bp AGGACGCCCATTCCAGCCTCCAGTCTCACGTTTACCTaGTCATCAATGGTATCAAATTTGGTAAGAACAATG +
Preference number: 6 (lower is better)
Translates to: RTPIPASSLTFT*SSMVSNLVRTM
Trigger: CATTGTTCTTACCAAATTTGATACCATTGATGACAAGGTAAACGTGAGACTGGAGGCTGGAATGGGCGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CCA 72 bp AAAGTGCCATTTAATAAACTTAAAGCACTTTGCTGTTaGATCTCTGTGCGGTACTTGTCCCGAAACAGCCGA +
Preference number: 6 (lower is better)
Translates to: KVPFNKLKALCC*ISVRYLSRNSR
Trigger: TCGGCTGTTTCGGGACAAGTACCGCACAGAGATCCAACAGCAAAGTGCTTTAAGTTTATTAAATGGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS TCA 72 bp ACTGTCTTGGGCTCTGGATTTGGTTCCAAGGTAATGTaGGAAAAACTTGATTATATGCTTGGCCATCACCAA +
Preference number: 6 (lower is better)
Translates to: TVLGSGFGSKVM*EKLDYMLGHHQ
Trigger: TTGGTGATGGCCAAGCATATAATCAAGTTTTTCTCACATTACCTTGGAACCAAATCCAGAGCCCAAGACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532268.1
CDS CAA 90 bp TTTAATAAACTTAAAGCACTTTGCTGTTGGATCTCTGTGCGGTACTaGTCCCGAAACAGCCGATGCACGTCATCTATCAATTTGTCTACA +
Preference number: 6 (lower is better)
Translates to: FNKLKALCCWISVRY*SRNSRCTSSINLST
Trigger: TGTAGACAAATTGATAGATGACGTGCATCGGCTGTTTCGGGACAAGTACCGCACAGAGATCCAACAGCAAAGTGCTTTAAGTTTATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332118.11
ENST00000528744.5
ENST00000530680.1
ENST00000532259.1
CDS TCA 72 bp CTCTGGATTTGGTTCCAAGGTAATGTGAGAAAAACTTaGTTATATGCTTGGCCATCACCAAACATATTCAGG +
Preference number: 6 (lower is better)
Translates to: LWIWFQGNVRKT*LYAWPSPNIFR
Trigger: CCTGAATATGTTTGGTGATGGCCAAGCATATAATCAAGTTTTTCTCACATTACCTTGGAACCAAATCCAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532268.1