Pregenerated sensors for SRPK2 (Homo sapiens)
Ensembl gene IDs: ENSG00000135250Ensembl transcript IDs: ENST00000357311.7, ENST00000393651.8, ENST00000462282.5, ENST00000465072.5, ENST00000465112.5, ENST00000466917.1, ENST00000482862.1, ENST00000482897.5, ENST00000489828.5, ENST00000493638.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACTAGTTATGTATGGTCCAGGTATGGGAAGAAGCAAGTTAGTAAATCGGTTTTCCCTTTTCTCTGCCTTTaGGCAGTTCTGTCTGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: TSYVWSRYGKKQVSKSVFPFLCL*AVLSAN Trigger: GTTGGCAGACAGAACTGCCCAAAGGCAGAGAAAAGG...GAAAACCGATTTACTAACTTGCTTCTTCCCATACCTGGACCATACATAACTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| 3UTR-3UTR GCA 90 bp | ACTAGTTATGTATGGTCCAGGTATGGGAAGAAGCAAGTTAGTAAATCGGTTTTCTTGGGCAGTTCTGTCTaGCAACTTCTAGATAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TSYVWSRYGKKQVSKSVFLGSSV*QLLDSQ Trigger: CTGGCTATCTAGAAGTTGGCAGACAGAACTGCCCAA...GAAAACCGATTTACTAACTTGCTTCTTCCCATACCTGGACCATACATAACTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| 3UTR-3UTR GCA 90 bp | AATCGGTTTTCACCTAAGAAGTTTATGACTCGGAAGATCTTATATCCACCTTTTACATATGTGATCCACTaGTTGTCATTTTCCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: NRFSPKKFMTRKILYPPFTYVIH*LSFSMK Trigger: CTTCATGGAAAATGACAAGCAGTGGATCACATATGT...AAAAGGTGGATATAAGATCTTCCGAGTCATAAACTTCTTAGGTGAAAACCGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| 3UTR CCA 72 bp | CAAAACACATTGGCTTTCCCTGATATGGTGGCCATCTaGCCCCTCAGATGTATCAACATCCTACAGCCCATC | + |
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Preference number: 3 (lower is better) Translates to: QNTLAFPDMVAI*PLRCINILQPI Trigger: GATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| 3UTR-3UTR CAA 90 bp | TACTTTATCGTGGTAACTAGTTATGTATGGTCCAGGTATGGGAAGAAGCAAGTTTATGTGATCCACTGCTaGTCATTTTCCATGAAGATT | + |
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Preference number: 3 (lower is better) Translates to: YFIVVTSYVWSRYGKKQVYVIHC*SFSMKI Trigger: AATCTTCATGGAAAATGACAAGCAGTGGATCACATA...AACTTGCTTCTTCCCATACCTGGACCATACATAACTAGTTACCACGATAAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| 3UTR CCA 72 bp | AAGTTTCCTTACTTTATCGTGGTAACTAGTTATGTATaGTCCAGGTATGGGAAGAAGCAAGTTAGTAAATCG | + |
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Preference number: 3 (lower is better) Translates to: KFPYFIVVTSYV*SRYGKKQVSKS Trigger: CGATTTACTAACTTGCTTCTTCCCATACCTGGACCATACATAACTAGTTACCACGATAAAGTAAGGAAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS-3UTR CCA 90 bp | GTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTGGTTCGGGGGTGTGGGGTCTaGCAAAGGTGGCGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VAIWPLRCINILQPIALVRGCGV*QRWRWW Trigger: CCACCACCGCCACCTTTGCCAGACCCCACACCCCCG...AACCAAGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CCA 90 bp | AAAACACATTGGCTTTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCAGGCGCCGAGACGAGCTaGGCTGCAGCCTCCACTCGC | + |
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Preference number: 4 (lower is better) Translates to: KTHWLSLIWWPSGPSDVSGAETS*AAASTR Trigger: GCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCC...TGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR GCA 90 bp | AAAACACATTGGCTTTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCACGAGACGAGCTGGGCTaGAGCCTCCACTCGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: KTHWLSLIWWPSGPSDVSRDELG*SLHSLR Trigger: GCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCG...TGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR TCA 90 bp | GTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTGGTTCACATTGGCTTTCCCTaGTATGGTGGCCATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VAIWPLRCINILQPIALVHIGFP*YGGHLA Trigger: GGCCAGATGGCCACCATATCAGGGAAAGCCAATGTG...AACCAAGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR TCA 90 bp | AAAACACATTGGCTTTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCACTCCGCTTTCGGGCCTaGATGGCCAGCACTTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: KTHWLSLIWWPSGPSDVSLRFRA*MASTFR Trigger: CCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAG...TGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CCA 90 bp | ATATGGTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTGGCTTTCCCTGATATaGTGGCCATCTGGCCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: IWWPSGPSDVSTSYSPSPWLSLI*WPSGPS Trigger: TGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCA...AGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCACCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR TCA 90 bp | CCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTGGTTGTTCGGAGTCTTCTACCCTTaGAGCAGCAGGATGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: PSGPSDVSTSYSPSPWLFGVFYP*SSRMYS Trigger: GGAGTACATCCTGCTGCTTCAAGGGTAGAAGACTCC...GAACAACCAAGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CCA 90 bp | AAAACACATTGGCTTTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCAGCTTTCGGGCCTGAATaGCCAGCACTTTCCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KTHWLSLIWWPSGPSDVSAFGPE*PALSGS Trigger: GCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGC...TGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CCA 90 bp | GTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTGGTTGATATGGTGGCCATCTaGCCCCTCAGATGTATCAAC | + |
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Preference number: 4 (lower is better) Translates to: VAIWPLRCINILQPIALVDMVAI*PLRCIN Trigger: GTTGATACATCTGAGGGGCCAGATGGCCACCATATC...AACCAAGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CCA 90 bp | TTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCCTTTCCCTGATATGGTaGCCATCTGGCCCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: FPDMVAIWPLRCINILQPLSLIW*PSGPSD Trigger: ATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAG...GGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR TCA 90 bp | AAAACACATTGGCTTTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCAAGGCTCCGGCCTTTCTaGAGAGGACGACTTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KTHWLSLIWWPSGPSDVSRLRPF*RGRLLR Trigger: TCTGAGAAGTCGTCCTCTTCAGAAAGGCCGGAGCCT...TGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CCA 90 bp | ATATGGTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTACAGCCCATCGCCTTaGTTGTTCACTCCTAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IWWPSGPSDVSTSYSPSPYSPSP*LFTPKR Trigger: TCTCTTAGGAGTGAACAACCAAGGCGATGGGCTGTA...AGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCACCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR TCA 90 bp | GTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTGGTTTCCTTTGAAATCTCATaGAGGAAAGCAGTGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VAIWPLRCINILQPIALVSFEIS*RKAVRS Trigger: ACTCCTCACTGCTTTCCTTCATGAGATTTCAAAGGA...AACCAAGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR TCA 90 bp | ATATGGTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTCTTCTCAGAGTTAACTaGCATCAGCAGCTCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: IWWPSGPSDVSTSYSPSPLLRVN*HQQLNL Trigger: AAGATTGAGCTGCTGATGTCAGTTAACTCTGAGAAG...AGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCACCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR TCA 90 bp | GATATGGTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCAACCAACACTTCCTTTaGAATCTCATGAAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: DMVAIWPLRCINILQPIANQHFL*NLMKES Trigger: GCTTTCCTTCATGAGATTTCAAAGGAAGTGTTGGTT...GGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCACCATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCTGTATCTGCTATAAACACATATGTGATCCACTGCTTGTCATTTTCCCCTTTTCTCTGCCTTTaGGCAGTTCTGTCTGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: PAPVSAINTYVIHCLSFSPFLCL*AVLSAN Trigger: GTTGGCAGACAGAACTGCCCAAAGGCAGAGAAAAGG...GGAAAATGACAAGCAGTGGATCACATATGTGTTTATAGCAGATACAGGAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCTGTATCTGCTATAAACACATATGTGATCCACTGCTTGTCATTTTCCAGCAGCTCTATGATGTaGGCTATGTGGTCTTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: PAPVSAINTYVIHCLSFSSSSMM*AMWSSS Trigger: AGACGAAGACCACATAGCCCACATCATAGAGCTGCT...GGAAAATGACAAGCAGTGGATCACATATGTGTTTATAGCAGATACAGGAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS-3UTR CCA 90 bp | AACACATTGGCTTTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCAACTTTTTCAAAACACATTaGCTTTCCCTGATATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NTLAFPDMVAIWPLRCINFFKTH*LSLIWW Trigger: CCACCATATCAGGGAAAGCCAATGTGTTTTGAAAAA...GTTGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR GCA 90 bp | AAGTTTCCTTACTTTATCGTGGTAACTAGTTATGTATGGTCCAGGTATGGGAAGTTGGGCAGTTCTGTCTaGCAACTTCTAGATAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KFPYFIVVTSYVWSRYGKLGSSV*QLLDSQ Trigger: CTGGCTATCTAGAAGTTGGCAGACAGAACTGCCCAA...CTTCCCATACCTGGACCATACATAACTAGTTACCACGATAAAGTAAGGAAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS-3UTR TCA 90 bp | ACTAGTTATGTATGGTCCAGGTATGGGAAGAAGCAAGTTAGTAAATCGGTTTTCTGTGATCTCTGCGATTaGAGAATTCCCGAGAATATT | + |
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Preference number: 4 (lower is better) Translates to: TSYVWSRYGKKQVSKSVFCDLCD*RIPENI Trigger: AATATTCTCGGGAATTCTTCAATCGCAGAGATCACA...GAAAACCGATTTACTAACTTGCTTCTTCCCATACCTGGACCATACATAACTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS-3UTR TCA 90 bp | AGTTATGTATGGTCCAGGTATGGGAAGAAGCAAGTTAGTAAATCGGTTTTCACCCACCTAAGAAGTTTATaGCTCGGAAGATCTTATATC | + |
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Preference number: 4 (lower is better) Translates to: SYVWSRYGKKQVSKSVFTHLRSL*LGRSYI Trigger: GATATAAGATCTTCCGAGTCATAAACTTCTTAGGTG...GGTGAAAACCGATTTACTAACTTGCTTCTTCCCATACCTGGACCATACATAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS-3UTR GCA 90 bp | TACTTTATCGTGGTAACTAGTTATGTATGGTCCAGGTATGGGAAGAAGCAAGTTGCCAGCTCCTGTATCTaGTATAAACACATATGTGAT | + |
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Preference number: 4 (lower is better) Translates to: YFIVVTSYVWSRYGKKQVASSCI*YKHICD Trigger: ATCACATATGTGTTTATAGCAGATACAGGAGCTGGC...AACTTGCTTCTTCCCATACCTGGACCATACATAACTAGTTACCACGATAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS-3UTR CCA 90 bp | TACTTTATCGTGGTAACTAGTTATGTATGGTCCAGGTATGGGAAGAAGCAAGTTGTAACTAGTTATGTATaGTCCAGGTATGGGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: YFIVVTSYVWSRYGKKQVVTSYV*SRYGKK Trigger: CTTCTTCCCATACCTGGACCATACATAACTAGTTAC...AACTTGCTTCTTCCCATACCTGGACCATACATAACTAGTTACCACGATAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS-3UTR GCA 90 bp | AAGTTTCCTTACTTTATCGTGGTAACTAGTTATGTATGGTCCAGGTATGGGAAGACATATGTGATCCACTaGTTGTCATTTTCCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: KFPYFIVVTSYVWSRYGKTYVIH*LSFSMK Trigger: CTTCATGGAAAATGACAAGCAGTGGATCACATATGT...CTTCCCATACCTGGACCATACATAACTAGTTACCACGATAAAGTAAGGAAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| 3UTR CAA 72 bp | CCTGTATCTGCTATAAACACATATGTGATCCACTGCTaGTCATTTTCCATGAAGATTTCACATGGAACTATA | + |
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Preference number: 4 (lower is better) Translates to: PVSAINTYVIHC*SFSMKISHGTI Trigger: TATAGTTCCATGTGAAATCTTCATGGAAAATGACAAGCAGTGGATCACATATGTGTTTATAGCAGATACAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS CCA 90 bp | AGCACCCGGCCGGTCGCGCCGCCCGCTGCTCCATGCGCCCGTCCTTaGCCGGCGCCTCCGCGGGTCTCGCACCACCTCTCTTCCCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: STRPVAPPAAPCARP*PAPPRVSHHLSSRG Trigger: GCCGCGGGAAGAGAGGTGGTGCGAGACCCGCGGAGGCGCCGGCCAAGGACGGGCGCATGGAGCAGCGGGCGGCGCGACCGGCCGGGTGCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482862.1 ENST00000482897.5 |
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| CDS GCA 90 bp | CTTTCGGGCCTGAATGGCCAGCACCCGGCCGGTCGCGCCGCCCGCTaGTCCATGCGCCCGTCCTTGGCCGGCGCCTCCGCGGGTCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: LSGLNGQHPAGRAAR*SMRPSLAGASAGLA Trigger: TGCGAGACCCGCGGAGGCGCCGGCCAAGGACGGGCGCATGGAGCAGCGGGCGGCGCGACCGGCCGGGTGCTGGCCATTCAGGCCCGAAAG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482862.1 ENST00000482897.5 |
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| CDS-3UTR CAA 90 bp | ATATGGTGGCCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTAGGAGTCTTCTACCCTaGAAGCAGCAGGATGTACTC | + |
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Preference number: 5 (lower is better) Translates to: IWWPSGPSDVSTSYSPSPRSLLP*KQQDVL Trigger: GAGTACATCCTGCTGCTTCAAGGGTAGAAGACTCCT...AGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGGCCACCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CAA 90 bp | AACACATTGGCTTTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCAACAGCCCATCGCCTTGGTaGTTCACTCCTAAGAGACCA | + |
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Preference number: 5 (lower is better) Translates to: NTLAFPDMVAIWPLRCINSPSPW*FTPKRP Trigger: TGGTCTCTTAGGAGTGAACAACCAAGGCGATGGGCT...GTTGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS-3UTR CAA 90 bp | CCAGCTCCTGTATCTGCTATAAACACATATGTGATCCACTGCTTGTCATTTTCCCTCCAGGGCTTCAGCTaGGTGATGTGTCGCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PAPVSAINTYVIHCLSFSLQGFS*VMCRSS Trigger: AGAACTGCGACACATCACCAAGCTGAAGCCCTGGAG...GGAAAATGACAAGCAGTGGATCACATATGTGTTTATAGCAGATACAGGAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS TCA 90 bp | CACTTTGTGGTAAGGCTTACGATAAAATCAAAGGGAAAGCAGTGCTaGCTGATATCACGTACTAGGTCTACTACCAGGTCCTGCCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: HFVVRLTIKSKGKQC*LISRTRSTTRSCPQ Trigger: CTGAGGGCAGGACCTGGTAGTAGACCTAGTACGTGATATCAGTCAGCACTGCTTTCCCTTTGATTTTATCGTAAGCCTTACCACAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS GCA 90 bp | AAAAAGCTACAGCTTTTGTCTGCCTCCCGTCATGGTTACCTGACTTaGAAAGCACTGGCAATGACAGCCTCCAACCTTTCAATCAATCAG | + |
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Preference number: 5 (lower is better) Translates to: KKLQLLSASRHGYLT*KALAMTASNLSINQ Trigger: CTGATTGATTGAAAGGTTGGAGGCTGTCATTGCCAGTGCTTTGCAAGTCAGGTAACCATGACGGGAGGCAGACAAAAGCTGTAGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS-3UTR CAA 90 bp | CCATCTGGCCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTGGTTGTTCAAACCAACACTTCCTTaGAAATCTCATGAAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PSGPSDVSTSYSPSPWLFKPTLP*KSHEGK Trigger: CTTTCCTTCATGAGATTTCAAAGGAAGTGTTGGTTT...GAACAACCAAGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGGCCAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS TCA 90 bp | GTCTATATACAAAGTAACAACATCCCAGCTCCTCAATGCCAAAAATaGAACAGGTGCCCGAGCAGGTGTATGTCACTGTGTGTTTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: VYIQSNNIPAPQCQK*NRCPSRCMSLCVWV Trigger: GACCCAAACACACAGTGACATACACCTGCTCGGGCACCTGTTTCATTTTTGGCATTGAGGAGCTGGGATGTTGTTACTTTGTATATAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS-3UTR CAA 90 bp | AACACATTGGCTTTCCCTGATATGGTGGCCATCTGGCCCCTCAGATGTATCAACATTTTTCAAAACACATaGGCTTTCCCTGATATGGTG | + |
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Preference number: 5 (lower is better) Translates to: NTLAFPDMVAIWPLRCINIFQNT*AFPDMV Trigger: CACCATATCAGGGAAAGCCAATGTGTTTTGAAAAAT...GTTGATACATCTGAGGGGCCAGATGGCCACCATATCAGGGAAAGCCAATGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS TCA 90 bp | CCTTATATCAAGAGATTTTTCTTCTCTAATCCCTTTTGTTCAGAATaGGGCCACAAGATTCGCAGTACTTCTGTTAGGACTGGGATTCAA | + |
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Preference number: 5 (lower is better) Translates to: PYIKRFFFSNPFCSE*GHKIRSTSVRTGIQ Trigger: TTGAATCCCAGTCCTAACAGAAGTACTGCGAATCTTGTGGCCTCATTCTGAACAAAAGGGATTAGAGAAGAAAAATCTCTTGATATAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357311.7 |
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| CDS GCA 90 bp | CCAAAGGACTTTAGGTTGAGTGCAGAAAAGCTGATGGTTATAATATaGAGTGTTTTTCTGCTGTATCAAGTATCAACTTGTGACTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PKDFRLSAEKLMVII*SVFLLYQVSTCDFW Trigger: CCAGAAGTCACAAGTTGATACTTGATACAGCAGAAAAACACTGCATATTATAACCATCAGCTTTTCTGCACTCAACCTAAAGTCCTTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS CCA 90 bp | ATATGCAGTGTTTTTCTGCTGTATCAAGTATCAACTTGTGACTTCTaGACACTTTTCCTGTCAGAAATACTCAATTGTGTTTACTACTGT | + |
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Preference number: 5 (lower is better) Translates to: ICSVFLLYQVSTCDF*TLFLSEILNCVYYC Trigger: ACAGTAGTAAACACAATTGAGTATTTCTGACAGGAAAAGTGTCCAGAAGTCACAAGTTGATACTTGATACAGCAGAAAAACACTGCATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS-3UTR CAA 90 bp | AATCGGTTTTCACCTAAGAAGTTTATGACTCGGAAGATCTTATATCCACCTTTTTATGTGATCCACTGCTaGTCATTTTCCATGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: NRFSPKKFMTRKILYPPFYVIHC*SFSMKI Trigger: AATCTTCATGGAAAATGACAAGCAGTGGATCACATA...AAAAGGTGGATATAAGATCTTCCGAGTCATAAACTTCTTAGGTGAAAACCGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000465072.5 |
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| CDS CAA 90 bp | CAGCACCCGGCCGGTCGCGCCGCCCGCTGCTCCATGCGCCCGTCCTaGGCCGGCGCCTCCGCGGGTCTCGCACCACCTCTCTTCCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: QHPAGRAARCSMRPS*AGASAGLAPPLFPR Trigger: CCGCGGGAAGAGAGGTGGTGCGAGACCCGCGGAGGCGCCGGCCAAGGACGGGCGCATGGAGCAGCGGGCGGCGCGACCGGCCGGGTGCTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482862.1 ENST00000482897.5 |
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| CDS GCA 72 bp | CTGAATGGCCAGCACCCGGCCGGTCGCGCCGCCCGCTaGTCCATGCGCCCGTCCTTGGCCGGCGCCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: LNGQHPAGRAAR*SMRPSLAGASA Trigger: CGCGGAGGCGCCGGCCAAGGACGGGCGCATGGAGCAGCGGGCGGCGCGACCGGCCGGGTGCTGGCCATTCAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482862.1 ENST00000482897.5 |
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| CDS CCA 72 bp | GGGCTTCGCGACGGCGACGCGGGCGCCGAGACGAGCTaGGCTGCAGCCTCCACTCGCTCCGCCGGCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLRDGDAGAETS*AAASTRSAGRE Trigger: CTCCCGGCCGGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393651.8 |
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| CDS CAA 72 bp | GCCGGTCGCGCCGCCCGCTGCTCCATGCGCCCGTCCTaGGCCGGCGCCTCCGCGGGTCTCGCACCACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AGRAARCSMRPS*AGASAGLAPPL Trigger: GAGAGGTGGTGCGAGACCCGCGGAGGCGCCGGCCAAGGACGGGCGCATGGAGCAGCGGGCGGCGCGACCGGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482862.1 ENST00000482897.5 |
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| CDS GCA 72 bp | TCGCGACGGCGACGCGGGCGCCGAGACGAGCTGGGCTaGAGCCTCCACTCGCTCCGCCGGCCGGGAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SRRRRGRRDELG*SLHSLRRPGGD Trigger: GTCTCCTCCCGGCCGGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393651.8 |
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| CDS CCA 72 bp | CCGGTCGCGCCGCCCGCTGCTCCATGCGCCCGTCCTTaGCCGGCGCCTCCGCGGGTCTCGCACCACCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PVAPPAAPCARP*PAPPRVSHHLS Trigger: AGAGAGGTGGTGCGAGACCCGCGGAGGCGCCGGCCAAGGACGGGCGCATGGAGCAGCGGGCGGCGCGACCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482862.1 ENST00000482897.5 |
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| CDS CCA 72 bp | TTTCTGTTGAGGCTCCGGCCTGCTGAGCTGCCTACATaGATGACCCTCAAAATTCTCAGACCCTGCAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: FLLRLRPAELPT*MTLKILRPCSL Trigger: TAGACTGCAGGGTCTGAGAATTTTGAGGGTCATCCATGTAGGCAGCTCAGCAGGCCGGAGCCTCAACAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462282.5 |
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| CDS CAA 72 bp | TTTGGGAGCAGTTTAGCTGGTGAGTCAAGATGTCACTaGAGGCCGCAGTCATCTGAAGGCTTGACGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FGSSLAGESRCH*RPQSSEGLTEA Trigger: AGCCTCCGTCAAGCCTTCAGATGACTGCGGCCTCAAGTGACATCTTGACTCACCAGCTAAACTGCTCCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462282.5 |
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| CDS GCA 72 bp | CAGCTTTTGTCTGCCTCCCGTCATGGTTACCTGACTTaGAAAGCACTGGCAATGACAGCCTCCAACCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: QLLSASRHGYLT*KALAMTASNLS Trigger: TGAAAGGTTGGAGGCTGTCATTGCCAGTGCTTTGCAAGTCAGGTAACCATGACGGGAGGCAGACAAAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS CAA 72 bp | CCCCTCAGATGTATCAACATCCTACAGCCCATCGCCTaGGTTGTTCACTCGTTAGCAGTAGGAGACAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PLRCINILQPIA*VVHSLAVGDSR Trigger: TCTGCTGTCTCCTACTGCTAACGAGTGAACAACCAAGGCGATGGGCTGTAGGATGTTGATACATCTGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489828.5 |
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| CDS CCA 72 bp | AACAGGTGCCCGAGCAGGTGTATGTCACTGTGTGTTTaGGTCTCACATATGAAGCTCTTAGCAGCCAAGACA | + |
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Preference number: 6 (lower is better) Translates to: NRCPSRCMSLCV*VSHMKLLAAKT Trigger: TGTCTTGGCTGCTAAGAGCTTCATATGTGAGACCCAAACACACAGTGACATACACCTGCTCGGGCACCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS CCA 72 bp | CCCTCAGATGTATCAACATCCTACAGCCCATCGCCTTaGTTGTTCACTCCTAAGAGACCACATCACTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PSDVSTSYSPSP*LFTPKRPHHCH Trigger: ATGACAGTGATGTGGTCTCTTAGGAGTGAACAACCAAGGCGATGGGCTGTAGGATGTTGATACATCTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465112.5 |
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| CDS CAA 90 bp | GAAAAAGCTACAGCTTTTGTCTGCCTCCCGTCATGGTTACCTGACTaGCAAAGCACTGGCAATGACAGCCTCCAACCTTTCAATCAATCA | + |
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Preference number: 6 (lower is better) Translates to: EKATAFVCLPSWLPD*QSTGNDSLQPFNQS Trigger: TGATTGATTGAAAGGTTGGAGGCTGTCATTGCCAGTGCTTTGCAAGTCAGGTAACCATGACGGGAGGCAGACAAAAGCTGTAGCTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS CCA 72 bp | AAAGAAAAAGCTACAGCTTTTGTCTGCCTCCCGTCATaGTTACCTGACTTGCAAAGCACTGGCAATGACAGC | + |
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Preference number: 6 (lower is better) Translates to: KEKATAFVCLPS*LPDLQSTGNDS Trigger: GCTGTCATTGCCAGTGCTTTGCAAGTCAGGTAACCATGACGGGAGGCAGACAAAAGCTGTAGCTTTTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS GCA 72 bp | CCAATTATCTTTTCTCTGCCTTTGGGCAGTTCTGTCTaGCAACTTCTAGATAGCCAGCTCCTGTATCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: PIIFSLPLGSSV*QLLDSQLLYLL Trigger: TAGCAGATACAGGAGCTGGCTATCTAGAAGTTGGCAGACAGAACTGCCCAAAGGCAGAGAAAAGATAATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS TCA 72 bp | GTAAGGCTTACGATAAAATCAAAGGGAAAGCAGTGCTaGCTGATATCACGTACTAGGTCTACTACCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VRLTIKSKGKQC*LISRTRSTTRS Trigger: GGACCTGGTAGTAGACCTAGTACGTGATATCAGTCAGCACTGCTTTCCCTTTGATTTTATCGTAAGCCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS TCA 72 bp | GTCTCACATATGAAGCTCTTAGCAGCCAAGACAACATaGACTGTAAGAGATAAGCCTATGCTGCAAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VSHMKLLAAKTT*TVRDKPMLQRE Trigger: TTCCCTTTGCAGCATAGGCTTATCTCTTACAGTTCATGTTGTCTTGGCTGCTAAGAGCTTCATATGTGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS CAA 90 bp | GTCTTCACCATTCAAACTCTAAGAGAACTGAAGTTCGAAATTCTCTaGGCCTTAAAGGAGAAGCTCCTCTTGCAAGTTTTATTTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VFTIQTLRELKFEIL*ALKEKLLLQVLFAA Trigger: AGCAGCAAATAAAACTTGCAAGAGGAGCTTCTCCTTTAAGGCCAAGAGAATTTCGAACTTCAGTTCTCTTAGAGTTTGAATGGTGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466917.1 |
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| CDS CCA 72 bp | CCAAAAATGAGCAAGGTAATAACATTGACCTTTCGATaGGTTCCAAAGGACTTTAGGTTGAGTGCAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: PKMSKVITLTFR*VPKDFRLSAEK Trigger: CTTTTCTGCACTCAACCTAAAGTCCTTTGGAACCCATCGAAAGGTCAATGTTATTACCTTGCTCATTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS CAA 72 bp | ACATTGACCTTTCGATGGGTTCCAAAGGACTTTAGGTaGAGTGCAGAAAAGCTGATGGTTATAATATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TLTFRWVPKDFR*SAEKLMVIICS Trigger: ACTGCATATTATAACCATCAGCTTTTCTGCACTCAACCTAAAGTCCTTTGGAACCCATCGAAAGGTCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS TCA 72 bp | AAGAGATTTTTCTTCTCTAATCCCTTTTGTTCAGAATaGGGCCACAAGATTCGCAGTACTTCTGTTAGGACT | + |
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Preference number: 6 (lower is better) Translates to: KRFFFSNPFCSE*GHKIRSTSVRT Trigger: AGTCCTAACAGAAGTACTGCGAATCTTGTGGCCTCATTCTGAACAAAAGGGATTAGAGAAGAAAAATCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357311.7 |
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| CDS CAA 72 bp | TGTAAAAGTCCTCCAAAAATGAGCAAGGTAATAACATaGACCTTTCGATGGGTTCCAAAGGACTTTAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: CKSPPKMSKVIT*TFRWVPKDFRL Trigger: CAACCTAAAGTCCTTTGGAACCCATCGAAAGGTCAATGTTATTACCTTGCTCATTTTTGGAGGACTTTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS CAA 90 bp | AAGGTAATAACATTGACCTTTCGATGGGTTCCAAAGGACTTTAGGTaGAGTGCAGAAAAGCTGATGGTTATAATATGCAGTGTTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: KVITLTFRWVPKDFR*SAEKLMVIICSVFL Trigger: CAGAAAAACACTGCATATTATAACCATCAGCTTTTCTGCACTCAACCTAAAGTCCTTTGGAACCCATCGAAAGGTCAATGTTATTACCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS TCA 72 bp | ATGCAGTGTTTTTCTGCTGTATCAAGTATCAACTTGTaGCTTCTGGACACTTTTCCTGTCAGAAATACTCAA | + |
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Preference number: 6 (lower is better) Translates to: MQCFSAVSSINL*LLDTFPVRNTQ Trigger: TTGAGTATTTCTGACAGGAAAAGTGTCCAGAAGTCACAAGTTGATACTTGATACAGCAGAAAAACACTGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS CCA 72 bp | GTTTTTCTGCTGTATCAAGTATCAACTTGTGACTTCTaGACACTTTTCCTGTCAGAAATACTCAATTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: VFLLYQVSTCDF*TLFLSEILNCV Trigger: AACACAATTGAGTATTTCTGACAGGAAAAGTGTCCAGAAGTCACAAGTTGATACTTGATACAGCAGAAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS GCA 72 bp | TTTAGGTTGAGTGCAGAAAAGCTGATGGTTATAATATaGAGTGTTTTTCTGCTGTATCAAGTATCAACTTGT | + |
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Preference number: 6 (lower is better) Translates to: FRLSAEKLMVII*SVFLLYQVSTC Trigger: ACAAGTTGATACTTGATACAGCAGAAAAACACTGCATATTATAACCATCAGCTTTTCTGCACTCAACCTAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493638.1 |
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| CDS CAA 72 bp | AAATCAGAAAATATTCACAACCAAGATTGCCTGCCCTaGCTTTCAAGCCTTATATCAAGAGATTTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: KSENIHNQDCLP*LSSLISRDFSS Trigger: AGAAGAAAAATCTCTTGATATAAGGCTTGAAAGCAAGGGCAGGCAATCTTGGTTGTGAATATTTTCTGATTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357311.7 |
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