Pregenerated sensors for SRP19 (Homo sapiens)
Ensembl gene IDs: ENSG00000153037Ensembl transcript IDs: ENST00000503445.5, ENST00000505459.6, ENST00000506997.2, ENST00000621420.5
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGGCAGCAGTGGGCTTGTGAGTCTCCTTGGGAGTATCATCAGCTaGCACTTTGAGGGCAGCTTGATTGAAAAGAGCCAGATCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: AGSSGLVSLLGSIIS*HFEGSLIEKSQICV Trigger: CACACAGATCTGGCTCTTTTCAATCAAGCTGCCCTCAAAGTGCCAGCTGATGATACTCCCAAGGAGACTCACAAGCCCACTGCTGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR TCA 90 bp | AAAATAGCATGGACTCTGTCTGAACTGCAGGCAGCAGTGGGCTTGTaGGTCTCCTTGGGAGTATCATCAGCTGGCACTTTGAGGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: KIAWTLSELQAAVGL*VSLGVSSAGTLRAA Trigger: AGCTGCCCTCAAAGTGCCAGCTGATGATACTCCCAAGGAGACTCACAAGCCCACTGCTGCCTGCAGTTCAGACAGAGTCCATGCTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR GCA 90 bp | TCGCTATTTCACTCAGGCTGGAGTGGAGTGAAGTGGCGTGATCTCTaGTCACTGCAACCTGTACTTCCCGCATTCAAGCAATTCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: SLFHSGWSGVKWRDL*SLQPVLPAFKQFSC Trigger: GCAGGAGAATTGCTTGAATGCGGGAAGTACAGGTTGCAGTGAGCAGAGATCACGCCACTTCACTCCACTCCAGCCTGAGTGAAATAGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 90 bp | GCTACTTGGGAGGCTAAGGTGGGAGAACTGCTTGCCAGAAGTGGCTaGCACAGCTACCTTTTCTTCCTGCCTTGCACTCATGTAAATATC | + |
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Preference number: 1 (lower is better) Translates to: ATWEAKVGELLARSG*HSYLFFLPCTHVNI Trigger: GATATTTACATGAGTGCAAGGCAGGAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCTTAGCCTCCCAAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR TCA 90 bp | TGGAGTTTCGCTATTTCACTCAGGCTGGAGTGGAGTGAAGTGGCGTaGTCTCTGCTCACTGCAACCTGTACTTCCCGCATTCAAGCAATT | + |
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Preference number: 1 (lower is better) Translates to: WSFAISLRLEWSEVA*SLLTATCTSRIQAI Trigger: AATTGCTTGAATGCGGGAAGTACAGGTTGCAGTGAGCAGAGATCACGCCACTTCACTCCACTCCAGCCTGAGTGAAATAGCGAAACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR TCA 90 bp | GCAGCTAGAGATGGACCTGTCACAGTTCTCAACAATGAAACTAAGTaGAAGCCTGCTGGGAGGAATTTTGAGAAATCTCATGCCTATGGT | + |
|
Preference number: 1 (lower is better) Translates to: AARDGPVTVLNNETK*KPAGRNFEKSHAYG Trigger: ACCATAGGCATGAGATTTCTCAAAATTCCTCCCAGCAGGCTTTCACTTAGTTTCATTGTTGAGAACTGTGACAGGTCCATCTCTAGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR TCA 90 bp | CTGAATTGCAGAGTCTCGTCTGTAGGAGAAGGTTCAGGAGAGTATTaGATTTTAGGGACTAGAATCCATCTTACCTATGCTGTTGCAATC | + |
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Preference number: 1 (lower is better) Translates to: LNCRVSSVGEGSGEY*ILGTRIHLTYAVAI Trigger: GATTGCAACAGCATAGGTAAGATGGATTCTAGTCCCTAAAATTCAATACTCTCCTGAACCTTCTCCTACAGACGAGACTCTGCAATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR GCA 90 bp | ATTGCTCTGTGTGCAGGAATACATAGCACATCCCCTGTGATGCTCTaGATATTCTTCAAAATGTCCACCAAGGATTCTGATATTCTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: IALCAGIHSTSPVML*IFFKMSTKDSDILS Trigger: TGACAGAATATCAGAATCCTTGGTGGACATTTTGAAGAATATGCAGAGCATCACAGGGGATGTGCTATGTATTCCTGCACACAGAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 90 bp | GGAAAATCACATGGTGACAGCATTAGAAGCACAGACGGAATAGAATaGCCTGTTGTAATTCGTAATTTAAGGAGTCATTGTGTCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: GKSHGDSIRSTDGIE*PVVIRNLRSHCVSA Trigger: AGCACTGACACAATGACTCCTTAAATTACGAATTACAACAGGCCATTCTATTCCGTCTGTGCTTCTAATGCTGTCACCATGTGATTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 90 bp | TGGGATAGCTCAAAATCACTACTTTCAGAAACCGCTCTGAAATTCTaGAGCACCAATCCAATTTCATTTGTTGAAGGAAAGTGTACCTCA | + |
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Preference number: 1 (lower is better) Translates to: WDSSKSLLSETALKF*STNPISFVEGKCTS Trigger: TGAGGTACACTTTCCTTCAACAAATGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGTTTCTGAAAGTAGTGATTTTGAGCTATCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
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| 3UTR CCA 90 bp | AGAACCTCCATGTGCCAGATTCTGTTCTACATCTGGGAGATACTTTaGCGAATAAAACAAAGTCCTTGTTGTCCTACTGTTTACATTTGT | + |
|
Preference number: 1 (lower is better) Translates to: RTSMCQILFYIWEIL*RIKQSPCCPTVYIC Trigger: ACAAATGTAAACAGTAGGACAACAAGGACTTTGTTTTATTCGCCAAAGTATCTCCCAGATGTAGAACAGAATCTGGCACATGGAGGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 90 bp | GCAGATTTATTTAGAACCTCCATGTGCCAGATTCTGTTCTACATCTaGGAGATACTTTGGCGAATAAAACAAAGTCCTTGTTGTCCTACT | + |
|
Preference number: 1 (lower is better) Translates to: ADLFRTSMCQILFYI*EILWRIKQSPCCPT Trigger: AGTAGGACAACAAGGACTTTGTTTTATTCGCCAAAGTATCTCCCAGATGTAGAACAGAATCTGGCACATGGAGGTTCTAAATAAATCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 90 bp | ATGGAGATTATGGCAGTGAATCCCATTGGATTGAATGGTCTGATATaGAAAGCAGGCTGTGTAGTTCCACTAGTCCAAAAATTCTATTTT | + |
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Preference number: 1 (lower is better) Translates to: MEIMAVNPIGLNGLI*KAGCVVPLVQKFYF Trigger: AAAATAGAATTTTTGGACTAGTGGAACTACACAGCCTGCTTTCCATATCAGACCATTCAATCCAATGGGATTCACTGCCATAATCTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR TCA 90 bp | AGAGCTAAACCAACCACCACAGCAACCTCACTTGGATTTAACATATaGGGCAAAAATATCCTGCTTAAATCCTTCATTGTTTTGTTACAC | + |
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Preference number: 1 (lower is better) Translates to: RAKPTTTATSLGFNI*GKNILLKSFIVLLH Trigger: GTGTAACAAAACAATGAAGGATTTAAGCAGGATATTTTTGCCTCATATGTTAAATCCAAGTGAGGTTGCTGTGGTGGTTGGTTTAGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR GCA 90 bp | ATATGCTCATTCCTTTATTCAGCAGATTTATTTAGAACCTCCATGTaGCAGATTCTGTTCTACATCTGGGAGATACTTTGGCGAATAAAA | + |
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Preference number: 1 (lower is better) Translates to: ICSFLYSADLFRTSM*QILFYIWEILWRIK Trigger: TTTTATTCGCCAAAGTATCTCCCAGATGTAGAACAGAATCTGGCACATGGAGGTTCTAAATAAATCTGCTGAATAAAGGAATGAGCATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 90 bp | ACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTTGGGTTaGGTAGCAGCCAAACCATATCAAGTATATATACATAGGCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: THRDLGIIIQDEILG*VAAKPYQVYIHRQK Trigger: TTTTTGCCTATGTATATATACTTGATATGGTTTGGCTGCTACCCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR CAA 90 bp | GCTAGAGCAGAGTTGCTGGGAAAACTAAGAGTAACATCGAACTACTaGCACATACTGAGGGTACCTCAAGGCGCTGGCTTCCTTGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ARAELLGKLRVTSNY*HILRVPQGAGFLGV Trigger: CACTCCAAGGAAGCCAGCGCCTTGAGGTACCCTCAGTATGTGCAAGTAGTTCGATGTTACTCTTAGTTTTCCCAGCAACTCTGCTCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CAA 90 bp | GTGAGTCTCCTTGGGAGTATCATCAGCTGGCACTTTGAGGGCAGCTaGATTGAAAAGAGCCAGATCTGTGTGGGTGACTTTAATAAACTC | + |
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Preference number: 2 (lower is better) Translates to: VSLLGSIISWHFEGS*IEKSQICVGDFNKL Trigger: GAGTTTATTAAAGTCACCCACACAGATCTGGCTCTTTTCAATCAAGCTGCCCTCAAAGTGCCAGCTGATGATACTCCCAAGGAGACTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAAGGTGGGAGAACTGCTTGCCAGAAGTGGCTGGCACAGCTACCTTTTCTTCAGGAAGAACAGGAATTaGGATAGCTCAAAATCACTA | + |
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Preference number: 2 (lower is better) Translates to: AKVGELLARSGWHSYLFFRKNRN*DSSKSL Trigger: TAGTGATTTTGAGCTATCCCAATTCCTGTTCTTCCT...GAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR CAA 90 bp | CAGTTCTCAACAATGAAACTAAGTGAAAGCCTGCTGGGAGGAATTTaGAGAAATCTCATGCCTATGGTCTCAGCTACTTGGGAGGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: QFSTMKLSESLLGGI*RNLMPMVSATWEAK Trigger: CTTAGCCTCCCAAGTAGCTGAGACCATAGGCATGAGATTTCTCAAAATTCCTCCCAGCAGGCTTTCACTTAGTTTCATTGTTGAGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTTGGGTTGGCTTGCCAGAAGTGGCTaGCACAGCTACCTTTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PLTHRDLGIIIQDEILGWLARSG*HSYLFF Trigger: GAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAG...CCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGTTAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR CAA 90 bp | ACTTTGGCGAATAAAACAAAGTCCTTGTTGTCCTACTGTTTACATTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TLANKTKSLLSYCLH*CVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACACACAAATGTAAACAGTAGGACAACAAGGACTTTGTTTTATTCGCCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGATCTCCTGAGAGTCACTCATTATCTCAAGAACAGCACAGGGGAAATTGCCGATTATAATTCAAGATaGGATTTTGGGTTGGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: TDLLRVTHYLKNSTGEIADYNSR*DFGLGS Trigger: GCTACCCAACCCAAAATCTCATCTTGAATTATAATC...GGCAATTTCCCCTGTGCTGTTCTTGAGATAATGAGTGACTCTCAGGAGATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR-3UTR CCA 90 bp | CTAAACCAGGCCTCAGGAAGAACAGGAATTGGGATAGCTCAAAATCACTACTTTACCGCTCTGAAATTCTaGAGCACCAATCCAATTTCA | + |
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Preference number: 2 (lower is better) Translates to: LNQASGRTGIGIAQNHYFTALKF*STNPIS Trigger: TGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGT...AAAGTAGTGATTTTGAGCTATCCCAATTCCTGTTCTTCCTGAGGCCTGGTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTTGGGTTGGGAAATCTCATGCCTATaGTCTCAGCTACTTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PLTHRDLGIIIQDEILGWEISCL*SQLLGR Trigger: CCTCCCAAGTAGCTGAGACCATAGGCATGAGATTTC...CCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGTTAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR CAA 90 bp | GTTCTACATCTGGGAGATACTTTGGCGAATAAAACAAAGTCCTTGTaGTCCTACTGTTTACATTTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VLHLGDTLANKTKSL*SYCLHLCVCVCVCV Trigger: CACACACACACACACACACACACACAAATGTAAACAGTAGGACAACAAGGACTTTGTTTTATTCGCCAAAGTATCTCCCAGATGTAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CAA 90 bp | TCTGTTCTACATCTGGGAGATACTTTGGCGAATAAAACAAAGTCCTaGTTGTCCTACTGTTTACATTTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SVLHLGDTLANKTKS*LSYCLHLCVCVCVC Trigger: ACACACACACACACACACACACAAATGTAAACAGTAGGACAACAAGGACTTTGTTTTATTCGCCAAAGTATCTCCCAGATGTAGAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAACCAGGCCTCAGGAAGAACAGGAATTGGGATAGCTCAAAATCACTACTTTTCCAATTTCATTTGTTaGAGGAAAGTGTACCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LNQASGRTGIGIAQNHYFSNFIC*RKVYLK Trigger: CTTGAGGTACACTTTCCTTCAACAAATGAAATTGGA...AAAGTAGTGATTTTGAGCTATCCCAATTCCTGTTCTTCCTGAGGCCTGGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
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| 3UTR CAA 90 bp | TGTGGACACTTAATTCATCCAGAAAAGATAATAAGCTTGTCTGGATaGCTGAAGGGTTGGCATCTACATAGGCAGGTAATATTTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CGHLIHPEKIISLSG*LKGWHLHRQVIFQR Trigger: TCTCTGAAATATTACCTGCCTATGTAGATGCCAACCCTTCAGCAATCCAGACAAGCTTATTATCTTTTCTGGATGAATTAAGTGTCCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAATTGGGATAGCTCAAAATCACTACTTTCAGAAACCGCTCTGAAATTCTGGTCCAATTTCATTTGTTaGAGGAAAGTGTACCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: RNWDSSKSLLSETALKFWSNFIC*RKVYLK Trigger: CTTGAGGTACACTTTCCTTCAACAAATGAAATTGGA...CCAGAATTTCAGAGCGGTTTCTGAAAGTAGTGATTTTGAGCTATCCCAATTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
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| 3UTR-3UTR TCA 90 bp | CCACCACAGCAACCTCACTTGGATTTAACATATGAGGCAAAAATATCCTGCTTACAAAGAAGGCTGCTCTaGATTATGTTTTACACATAC | + |
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Preference number: 2 (lower is better) Translates to: PPQQPHLDLTYEAKISCLQRRLL*IMFYTY Trigger: GTATGTGTAAAACATAATTCAGAGCAGCCTTCTTTG...TAAGCAGGATATTTTTGCCTCATATGTTAAATCCAAGTGAGGTTGCTGTGGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR-3UTR CCA 90 bp | CTACTTTCAGAAACCGCTCTGAAATTCTGGAGCACCAATCCAATTTCATTTGTTATATCATCTACAGACTaGCTTTTTACAGACTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LLSETALKFWSTNPISFVISSTD*LFTDSP Trigger: AGGGGAGTCTGTAAAAAGCCAGTCTGTAGATGATAT...AACAAATGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGTTTCTGAAAGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
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| 3UTR CAA 90 bp | CCCTTAACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTaGGGTTGGGTAGCAGCCAAACCATATCAAGTATATATACATAGG | + |
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Preference number: 2 (lower is better) Translates to: PLTHRDLGIIIQDEI*GWVAAKPYQVYIHR Trigger: CCTATGTATATATACTTGATATGGTTTGGCTGCTACCCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGTTAAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR-3UTR GCA 90 bp | CCACCACAGCAACCTCACTTGGATTTAACATATGAGGCAAAAATATCCTGCTTAAAATATGAGATAGCTTaGAGAATTCAAGGAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PPQQPHLDLTYEAKISCLKYEIA*RIQGRA Trigger: AGCTCTTCCTTGAATTCTGCAAGCTATCTCATATTT...TAAGCAGGATATTTTTGCCTCATATGTTAAATCCAAGTGAGGTTGCTGTGGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR-3UTR CCA 90 bp | TCCACAACTCTAGGTTTGCTTATTTTACAATCAATAGGAATGTTTGACTGTGAGATATCATCTACAGACTaGCTTTTTACAGACTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: STTLGLLILQSIGMFDCEISSTD*LFTDSP Trigger: AGGGGAGTCTGTAAAAAGCCAGTCTGTAGATGATAT...CTCACAGTCAAACATTCCTATTGATTGTAAAATAAGCAAACCTAGAGTTGTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR GCA 72 bp | TGGTCTCAGCTACTTGGGAGGCTAAGGTGGGAGAACTaGTTGCCAGAAGTGGCTGGCACAGCTACCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: WSQLLGRLRWEN*LPEVAGTATFS Trigger: AGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCTTAGCCTCCCAAGTAGCTGAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR GCA 72 bp | CACTCAGGCTGGAGTGGAGTGAAGTGGCGTGATCTCTaGTCACTGCAACCTGTACTTCCCGCATTCAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: HSGWSGVKWRDL*SLQPVLPAFKQ Trigger: TTGCTTGAATGCGGGAAGTACAGGTTGCAGTGAGCAGAGATCACGCCACTTCACTCCACTCCAGCCTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 72 bp | GAGGCTAAGGTGGGAGAACTGCTTGCCAGAAGTGGCTaGCACAGCTACCTTTTCTTCCTGCCTTGCACTCAT | + |
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Preference number: 3 (lower is better) Translates to: EAKVGELLARSG*HSYLFFLPCTH Trigger: ATGAGTGCAAGGCAGGAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCTTAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR TCA 72 bp | ATGGAGTTTCGCTATTTCACTCAGGCTGGAGTGGAGTaGAGTGGCGTGATCTCTGCTCACTGCAACCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: MEFRYFTQAGVE*SGVISAHCNLY Trigger: GTACAGGTTGCAGTGAGCAGAGATCACGCCACTTCACTCCACTCCAGCCTGAGTGAAATAGCGAAACTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 72 bp | GAACTACTTGCACATACTGAGGGTACCTCAAGGCGCTaGCTTCCTTGGAGTGCTTGGACCTTTAACAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ELLAHTEGTSRR*LPWSAWTFNRR Trigger: CCTTCTGTTAAAGGTCCAAGCACTCCAAGGAAGCCAGCGCCTTGAGGTACCCTCAGTATGTGCAAGTAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 72 bp | AGTGGGCTTGTGAGTCTCCTTGGGAGTATCATCAGCTaGCACTTTGAGGGCAGCTTGATTGAAAAGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: SGLVSLLGSIIS*HFEGSLIEKSQ Trigger: CTGGCTCTTTTCAATCAAGCTGCCCTCAAAGTGCCAGCTGATGATACTCCCAAGGAGACTCACAAGCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 72 bp | AGTGCTAATAGTGCCAAGAGTCCAGTTAAAATAGCATaGACTCTGTCTGAACTGCAGGCAGCAGTGGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: SANSAKSPVKIA*TLSELQAAVGL Trigger: CAAGCCCACTGCTGCCTGCAGTTCAGACAGAGTCCATGCTATTTTAACTGGACTCTTGGCACTATTAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 72 bp | GGTTCAGTACTATCTGCTGTTTCAGGGATCCACTCTTaGAATGTATTCCCCAAGGATAAGGAGGACTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: GSVLSAVSGIHS*NVFPKDKEDCC Trigger: ACAGCAGTCCTCCTTATCCTTGGGGAATACATTCCAAGAGTGGATCCCTGAAACAGCAGATAGTACTGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR GCA 72 bp | TGTGCAGGAATACATAGCACATCCCCTGTGATGCTCTaGATATTCTTCAAAATGTCCACCAAGGATTCTGAT | + |
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Preference number: 3 (lower is better) Translates to: CAGIHSTSPVML*IFFKMSTKDSD Trigger: ATCAGAATCCTTGGTGGACATTTTGAAGAATATGCAGAGCATCACAGGGGATGTGCTATGTATTCCTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR CCA 72 bp | ATGGCAGTGAATCCCATTGGATTGAATGGTCTGATATaGAAAGCAGGCTGTGTAGTTCCACTAGTCCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: MAVNPIGLNGLI*KAGCVVPLVQK Trigger: TTTTTGGACTAGTGGAACTACACAGCCTGCTTTCCATATCAGACCATTCAATCCAATGGGATTCACTGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR TCA 72 bp | GATGGACCTGTCACAGTTCTCAACAATGAAACTAAGTaGAAGCCTGCTGGGAGGAATTTTGAGAAATCTCAT | + |
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Preference number: 3 (lower is better) Translates to: DGPVTVLNNETK*KPAGRNFEKSH Trigger: ATGAGATTTCTCAAAATTCCTCCCAGCAGGCTTTCACTTAGTTTCATTGTTGAGAACTGTGACAGGTCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| 3UTR TCA 72 bp | AAGGTCTTAGTCTACCATTGTGTGTGTGCAGAAGGCTaGTTTGAGTTTTTGCATGATTGCACATTCATGCAC | + |
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Preference number: 3 (lower is better) Translates to: KVLVYHCVCAEG*FEFLHDCTFMH Trigger: GTGCATGAATGTGCAATCATGCAAAAACTCAAATCAGCCTTCTGCACACACACAATGGTAGACTAAGACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506997.2 |
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| 3UTR GCA 72 bp | AAGCTTTCTTCTGACATTAACTCTCAGTTCCGTAACTaGATGTTAAGCATACCCCTACCTGGGAAATATCTC | + |
|
Preference number: 3 (lower is better) Translates to: KLSSDINSQFRN*MLSIPLPGKYL Trigger: GAGATATTTCCCAGGTAGGGGTATGCTTAACATGCAGTTACGGAACTGAGAGTTAATGTCAGAAGAAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTAACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTTGGGTTGGCCACAGCAACCTCACTaGGATTTAACATATGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLTHRDLGIIIQDEILGWPQQPH*DLTYEA Trigger: TGCCTCATATGTTAAATCCAAGTGAGGTTGCTGTGG...CCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGTTAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| 3UTR TCA 72 bp | TCTGAAATTCTGGAGCACCAATCCAATTTCATTTGTTaGAGGAAAGTGTACCTCAAGGTGCTAAAGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SEILEHQSNFIC*RKVYLKVLKHS Trigger: ACTGTGCTTTAGCACCTTGAGGTACACTTTCCTTCAACAAATGAAATTGGATTGGTGCTCCAGAATTTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| 3UTR GCA 72 bp | GGCAAAAACATAGTATATATAGGGTTCAGTACTATCTaGTGTTTCAGGGATCCACTCTTGGAATGTATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GKNIVYIGFSTI*CFRDPLLECIP Trigger: GGGAATACATTCCAAGAGTGGATCCCTGAAACAGCAGATAGTACTGAACCCTATATATACTATGTTTTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| 3UTR CCA 72 bp | CATGGTGACAGCATTAGAAGCACAGACGGAATAGAATaGCCTGTTGTAATTCGTAATTTAAGGAGTCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: HGDSIRSTDGIE*PVVIRNLRSHC Trigger: ACAATGACTCCTTAAATTACGAATTACAACAGGCCATTCTATTCCGTCTGTGCTTCTAATGCTGTCACCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACCACAGCAACCTCACTTGGATTTAACATATGAGGCAAAAATATCCTGCTTAAAACACATCCCCTTATaGTTTTGTTACACAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPQQPHLDLTYEAKISCLKHIPL*FCYTAK Trigger: TTTGGCTGTGTAACAAAACAATAAGGGGATGTGTTT...TAAGCAGGATATTTTTGCCTCATATGTTAAATCCAAGTGAGGTTGCTGTGGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| 3UTR GCA 72 bp | TTCCTTTATTCAGCAGATTTATTTAGAACCTCCATGTaGCAGATTCTGTTCTACATCTGGGAGATACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLYSADLFRTSM*QILFYIWEILW Trigger: CCAAAGTATCTCCCAGATGTAGAACAGAATCTGGCACATGGAGGTTCTAAATAAATCTGCTGAATAAAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| 3UTR CCA 72 bp | GAAAAGATAATAAGCTTGTCTGGATTGCTGAAGGGTTaGCATCTACATAGGCAGGTAATATTTCAGAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: EKIISLSGLLKG*HLHRQVIFQRF Trigger: AAATCTCTGAAATATTACCTGCCTATGTAGATGCCAACCCTTCAGCAATCCAGACAAGCTTATTATCTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCACCGCCTGACCCCTCAGACATTCTTAACCTGTAATCACAGCACTTCCGGAGGAACCCGGCTCTaGGTTTCCGAGACAGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CQHRLTPQTFLTCNHSTSGGTRL*VSETAR Trigger: GCGGGCTGTCTCGGAAACTCAGAGCCGGGTTCCTCC...GGAAGTGCTGTGATTACAGGTTAAGAATGTCTGAGGGGTCAGGCGGTGCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
||
| CDS-3UTR TCA 90 bp | GCTAAGGTGGGAGAACTGCTTGCCAGAAGTGGCTGGCACAGCTACCTTTTCTTCGGCAGGAGGATCACTTaGGCCTGGGAGTTTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: AKVGELLARSGWHSYLFFGRRIT*AWEFKT Trigger: GGTCTTAAACTCCCAGGCTCAAGTGATCCTCCTGCC...GAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCACCGCCTGACCCCTCAGACATTCTTAACCTGTAATCACAGCACTTCCGTCCTGCCCAAGAAATaGTTCCGCGTCCGCGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQHRLTPQTFLTCNHSTSVLPKK*FRVRDF Trigger: GAAATCGCGGACGCGGAACCATTTCTTGGGCAGGAC...GGAAGTGCTGTGATTACAGGTTAAGAATGTCTGAGGGGTCAGGCGGTGCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
||
| CDS-3UTR GCA 90 bp | CAGACATTCTTAACCTGTAATCACAGCACTTCCAGAGGTCAAGGTGGGTGGATTTTCCGCCGGAAGTCCTaGCCAAGAAATGGTTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTFLTCNHSTSRGQGGWIFRRKS*PRNGSA Trigger: CGCGGAACCATTTCTTGGGCAGGACTTCCGGCGGAA...AATCCACCCACCTTGACCTCTGGAAGTGCTGTGATTACAGGTTAAGAATGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
||
| CDS-3UTR CCA 90 bp | CAGCACCGCCTGACCCCTCAGACATTCTTAACCTGTAATCACAGCACTTCCAGATTCCAGAGGTCAAGGTaGGTGGATTGCTTGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QHRLTPQTFLTCNHSTSRFQRSR*VDCLSS Trigger: TGAGCTCAAGCAATCCACCCACCTTGACCTCTGGAA...TCTGGAAGTGCTGTGATTACAGGTTAAGAATGTCTGAGGGGTCAGGCGGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
||
| CDS-3UTR TCA 90 bp | GCTAAGGTGGGAGAACTGCTTGCCAGAAGTGGCTGGCACAGCTACCTTTTCTTCTGCTGGGAGGAATTTTaGGAAATCTCATGCCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: AKVGELLARSGWHSYLFFCWEEF*EISCLW Trigger: CCATAGGCATGAGATTTCTCAAAATTCCTCCCAGCA...GAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| 3UTR CAA 72 bp | GAGTTGCTGGGAAAACTAAGAGTAACATCGAACTACTaGCACATACTGAGGGTACCTCAAGGCGCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELLGKLRVTSNY*HILRVPQGAGF Trigger: GAAGCCAGCGCCTTGAGGTACCCTCAGTATGTGCAAGTAGTTCGATGTTACTCTTAGTTTTCCCAGCAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| CDS-3UTR TCA 90 bp | GGAATTTTGAGAAATCTCATGCCTATGGTCTCAGCTACTTGGGAGGCTAAGGTGGGGAAATTGCCCCCATaGTCCAATTATCTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GILRNLMPMVSATWEAKVGKLPP*SNYLHL Trigger: CAGGTGGAGATAATTGGATCATGGGGGCAATTTCCC...CACCTTAGCCTCCCAAGTAGCTGAGACCATAGGCATGAGATTTCTCAAAATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR GCA 90 bp | AGGAATTGGGATAGCTCAAAATCACTACTTTCAGAAACCGCTCTGAAATTCTGGGCTGGACCCGGACTCTaGCTCTGTATTGGACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNWDSSKSLLSETALKFWAGPGL*LCIGHH Trigger: GTGATGTCCAATACAGAGGCAGAGTCCGGGTCCAGC...CCAGAATTTCAGAGCGGTTTCTGAAAGTAGTGATTTTGAGCTATCCCAATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGTCACTCATTATCTCAAGAACAGCACAGGGGAAATTGCCCCCATGATCCATCAGGGATCCACTCTTaGAATGTATTCCCCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESHSLSQEQHRGNCPHDPSGIHS*NVFPKD Trigger: ATCCTTGGGGAATACATTCCAAGAGTGGATCCCTGA...TGGATCATGGGGGCAATTTCCCCTGTGCTGTTCTTGAGATAATGAGTGACTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR GCA 90 bp | CCCTTAACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTTGGGTTGGGCTGGACCCGGACTCTaGCTCTGTATTGGACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLTHRDLGIIIQDEILGWAGPGL*LCIGHH Trigger: GTGATGTCCAATACAGAGGCAGAGTCCGGGTCCAGC...CCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGTTAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR CCA 90 bp | CTAAACCAACCACCACAGCAACCTCACTTGGATTTAACATATGAGGCAAAAATACTTGGGAGGCTAAGGTaGGAGAACTGCTTGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNQPPQQPHLDLTYEAKILGRLR*ENCLPE Trigger: TTCTGGCAAGCAGTTCTCCCACCTTAGCCTCCCAAG...TATTTTTGCCTCATATGTTAAATCCAAGTGAGGTTGCTGTGGTGGTTGGTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGGGAGGAATTTTGAGAAATCTCATGCCTATGGTCTCAGCTACTTGGGATCCAATTTCATTTGTTaGAGGAAAGTGTACCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAGRNFEKSHAYGLSYLGSNFIC*RKVYLK Trigger: CTTGAGGTACACTTTCCTTCAACAAATGAAATTGGA...TCCCAAGTAGCTGAGACCATAGGCATGAGATTTCTCAAAATTCCTCCCAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR CCA 90 bp | CTACTTTCAGAAACCGCTCTGAAATTCTGGAGCACCAATCCAATTTCATTTGTTCTTGCCAGAAGTGGCTaGCACAGCTACCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSETALKFWSTNPISFVLARSG*HSYLFF Trigger: GAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAG...AACAAATGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGTTTCTGAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR CCA 90 bp | CTACTTTCAGAAACCGCTCTGAAATTCTGGAGCACCAATCCAATTTCATTTGTTATGGTCTCAGCTACTTaGGAGGCTAAGGTGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSETALKFWSTNPISFVMVSAT*EAKVGE Trigger: TTCTCCCACCTTAGCCTCCCAAGTAGCTGAGACCAT...AACAAATGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGTTTCTGAAAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGCAACCTCACTTGGATTTAACATATGAGGCAAAAATATCCTGCTTAGAAATCTCATGCCTATaGTCTCAGCTACTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQQPHLDLTYEAKISCLEISCL*SQLLGR Trigger: CCTCCCAAGTAGCTGAGACCATAGGCATGAGATTTC...TAAGCAGGATATTTTTGCCTCATATGTTAAATCCAAGTGAGGTTGCTGTGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| 3UTR CAA 72 bp | ACAATGAAACTAAGTGAAAGCCTGCTGGGAGGAATTTaGAGAAATCTCATGCCTATGGTCTCAGCTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TMKLSESLLGGI*RNLMPMVSATW Trigger: CCAAGTAGCTGAGACCATAGGCATGAGATTTCTCAAAATTCCTCCCAGCAGGCTTTCACTTAGTTTCATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| 3UTR CAA 72 bp | CATGTGCCAGATTCTGTTCTACATCTGGGAGATACTTaGGCGAATAAAACAAAGTCCTTGTTGTCCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVPDSVLHLGDT*ANKTKSLLSYC Trigger: ACAGTAGGACAACAAGGACTTTGTTTTATTCGCCAAAGTATCTCCCAGATGTAGAACAGAATCTGGCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATTGGGATAGCTCAAAATCACTACTTTCAGAAACCGCTCTGAAATTCTGGAACCAACAGATCTCCTaGGAGTCACTCATTATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNWDSSKSLLSETALKFWNQQIS*ESLIIS Trigger: TGAGATAATGAGTGACTCTCAGGAGATCTGTTGGTT...CCAGAATTTCAGAGCGGTTTCTGAAAGTAGTGATTTTGAGCTATCCCAATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR GCA 90 bp | ATCCAATTTCATTTGTTGAAGGAAAGTGTACCTCAAGGTGCTAAAGCACAGTTAGGGTTCAGTACTATCTaGTGTTTCAGGGATCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: IQFHLLKESVPQGAKAQLGFSTI*CFRDPL Trigger: GAGTGGATCCCTGAAACAGCAGATAGTACTGAACCC...TAACTGTGCTTTAGCACCTTGAGGTACACTTTCCTTCAACAAATGAAATTGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR CCA 90 bp | CTAAACCAGGCCTCAGGAAGAACAGGAATTGGGATAGCTCAAAATCACTACTTTATATCATCTACAGACTaGCTTTTTACAGACTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNQASGRTGIGIAQNHYFISSTD*LFTDSP Trigger: AGGGGAGTCTGTAAAAAGCCAGTCTGTAGATGATAT...AAAGTAGTGATTTTGAGCTATCCCAATTCCTGTTCTTCCTGAGGCCTGGTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| CDS-3UTR CCA 90 bp | AGGAATTGGGATAGCTCAAAATCACTACTTTCAGAAACCGCTCTGAAATTCTGGATATCATCTACAGACTaGCTTTTTACAGACTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNWDSSKSLLSETALKFWISSTD*LFTDSP Trigger: AGGGGAGTCTGTAAAAAGCCAGTCTGTAGATGATAT...CCAGAATTTCAGAGCGGTTTCTGAAAGTAGTGATTTTGAGCTATCCCAATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| 3UTR CAA 72 bp | CTGGGAGATACTTTGGCGAATAAAACAAAGTCCTTGTaGTCCTACTGTTTACATTTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGDTLANKTKSL*SYCLHLCVCVC Trigger: ACACACACACACACACAAATGTAAACAGTAGGACAACAAGGACTTTGTTTTATTCGCCAAAGTATCTCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| 3UTR CAA 72 bp | CATCTGGGAGATACTTTGGCGAATAAAACAAAGTCCTaGTTGTCCTACTGTTTACATTTGTGTGTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLGDTLANKTKS*LSYCLHLCVCV Trigger: CACACACACACACAAATGTAAACAGTAGGACAACAAGGACTTTGTTTTATTCGCCAAAGTATCTCCCAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATTGGGATAGCTCAAAATCACTACTTTCAGAAACCGCTCTGAAATTCTGGGATTATAATTCAAGATaGGATTTTGGGTTGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNWDSSKSLLSETALKFWDYNSR*DFGLGS Trigger: GCTACCCAACCCAAAATCTCATCTTGAATTATAATC...CCAGAATTTCAGAGCGGTTTCTGAAAGTAGTGATTTTGAGCTATCCCAATTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR GCA 90 bp | CTAAACCAGGCCTCAGGAAGAACAGGAATTGGGATAGCTCAAAATCACTACTTTAAATATGAGATAGCTTaGAGAATTCAAGGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNQASGRTGIGIAQNHYFKYEIA*RIQGRA Trigger: AGCTCTTCCTTGAATTCTGCAAGCTATCTCATATTT...AAAGTAGTGATTTTGAGCTATCCCAATTCCTGTTCTTCCTGAGGCCTGGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| CDS-3UTR CCA 90 bp | AAGGACCTACCACAGTTTCTTCTAGTTTTAGCCTCACACTATGGAAACTTTCACAGGAAGAACAGGAATTaGGATAGCTCAAAATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: KDLPQFLLVLASHYGNFHRKNRN*DSSKSL Trigger: TAGTGATTTTGAGCTATCCCAATTCCTGTTCTTCCT...GTGAAAGTTTCCATAGTGTGAGGCTAAAACTAGAAGAAACTGTGGTAGGTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| 3UTR CAA 72 bp | AATAAAACAAAGTCCTTGTTGTCCTACTGTTTACATTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKTKSLLSYCLH*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACAAATGTAAACAGTAGGACAACAAGGACTTTGTTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTTCAGAAACCGCTCTGAAATTCTGGAGCACCAATCCAATTTCATTTGTTTCCAATTTCATTTGTTaGAGGAAAGTGTACCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSETALKFWSTNPISFVSNFIC*RKVYLK Trigger: CTTGAGGTACACTTTCCTTCAACAAATGAAATTGGA...AACAAATGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGTTTCTGAAAGTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| CDS-3UTR GCA 90 bp | AGGAATTGGGATAGCTCAAAATCACTACTTTCAGAAACCGCTCTGAAATTCTGGAAATATGAGATAGCTTaGAGAATTCAAGGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNWDSSKSLLSETALKFWKYEIA*RIQGRA Trigger: AGCTCTTCCTTGAATTCTGCAAGCTATCTCATATTT...CCAGAATTTCAGAGCGGTTTCTGAAAGTAGTGATTTTGAGCTATCCCAATTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| CDS-3UTR CCA 90 bp | TCCACAACTCTAGGTTTGCTTATTTTACAATCAATAGGAATGTTTGACTGTGAGACCGCTCTGAAATTCTaGAGCACCAATCCAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STTLGLLILQSIGMFDCETALKF*STNPIS Trigger: TGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGT...CTCACAGTCAAACATTCCTATTGATTGTAAAATAAGCAAACCTAGAGTTGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR CCA 90 bp | CTACTTTCAGAAACCGCTCTGAAATTCTGGAGCACCAATCCAATTTCATTTGTTAGGAAGAACAGGAATTaGGATAGCTCAAAATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LLSETALKFWSTNPISFVRKNRN*DSSKSL Trigger: TAGTGATTTTGAGCTATCCCAATTCCTGTTCTTCCT...AACAAATGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGTTTCTGAAAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
||
| 3UTR CAA 72 bp | CATAGGGATTTGGGGATTATAATTCAAGATGAGATTTaGGGTTGGGTAGCAGCCAAACCATATCAAGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: HRDLGIIIQDEI*GWVAAKPYQVY Trigger: ATATACTTGATATGGTTTGGCTGCTACCCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| 3UTR CAA 72 bp | TTAATTCATCCAGAAAAGATAATAAGCTTGTCTGGATaGCTGAAGGGTTGGCATCTACATAGGCAGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LIHPEKIISLSG*LKGWHLHRQVI Trigger: TATTACCTGCCTATGTAGATGCCAACCCTTCAGCAATCCAGACAAGCTTATTATCTTTTCTGGATGAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506997.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAATTTCATTTGTTGAAGGAAAGTGTACCTCAAGGTGCTAAAGCACAGTTAGTTAGAAATATGTCATaGACAGCAGAGCGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQFHLLKESVPQGAKAQLVRNMS*TAERKN Trigger: ATTTTTCCGCTCTGCTGTCCATGACATATTTCTAAC...TAACTGTGCTTTAGCACCTTGAGGTACACTTTCCTTCAACAAATGAAATTGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS TCA 90 bp | AGCCGCAGGGAGAAACCCGGCAGAAACCCGGGAGGAACCCGGCTCTaGGTTTCCGAGACAGCCCGCTTTTCCGCCGGAAGTCCTGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRREKPGRNPGGTRL*VSETARFSAGSPAQ Trigger: TTGGGCAGGACTTCCGGCGGAAAAGCGGGCTGTCTCGGAAACTCAGAGCCGGGTTCCTCCCGGGTTTCTGCCGGGTTTCTCCCTGCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
||
| CDS GCA 90 bp | CCGGCTCTGAGTTTCCGAGACAGCCCGCTTTTCCGCCGGAAGTCCTaGCCAAGAAATGGTTCCGCGTCCGCGATTTCTCATCGCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PALSFRDSPLFRRKS*PRNGSASAISHRLF Trigger: AAACAGGCGATGAGAAATCGCGGACGCGGAACCATTTCTTGGGCAGGACTTCCGGCGGAAAAGCGGGCTGTCTCGGAAACTCAGAGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
||
| CDS CCA 90 bp | TTTCCGAGACAGCCCGCTTTTCCGCCGGAAGTCCTGCCCAAGAAATaGTTCCGCGTCCGCGATTTCTCATCGCCTGTTTGTTCCGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: FPRQPAFPPEVLPKK*FRVRDFSSPVCSGT Trigger: GGTGCCGGAACAAACAGGCGATGAGAAATCGCGGACGCGGAACCATTTCTTGGGCAGGACTTCCGGCGGAAAAGCGGGCTGTCTCGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
||
| CDS-3UTR CAA 90 bp | ACCCCTCAGACATTCTTAACCTGTAATCACAGCACTTCCAGAGGTCAAGGTGGGTTTCTCATCGCCTGTTaGTTCCGGCACCTGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TPQTFLTCNHSTSRGQGGFLIAC*FRHLSL Trigger: GAGCGACAGGTGCCGGAACAAACAGGCGATGAGAAA...CCCACCTTGACCTCTGGAAGTGCTGTGATTACAGGTTAAGAATGTCTGAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
||
| CDS-3UTR CAA 90 bp | ACAGATCTCCTGAGAGTCACTCATTATCTCAAGAACAGCACAGGGGAAATTGCCAGGTGGGAGAACTGCTaGCCAGAAGTGGCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TDLLRVTHYLKNSTGEIARWENC*PEVAGT Trigger: TGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCT...GGCAATTTCCCCTGTGCTGTTCTTGAGATAATGAGTGACTCTCAGGAGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
||
| CDS-3UTR CAA 90 bp | GCTAAGGTGGGAGAACTGCTTGCCAGAAGTGGCTGGCACAGCTACCTTTTCTTCCCACAGCAACCTCACTaGGATTTAACATATGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: AKVGELLARSGWHSYLFFPQQPH*DLTYEA Trigger: TGCCTCATATGTTAAATCCAAGTGAGGTTGCTGTGG...GAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| CDS-3UTR CAA 90 bp | GCTAAGGTGGGAGAACTGCTTGCCAGAAGTGGCTGGCACAGCTACCTTTTCTTCATTCAAGATGAGATTTaGGGTTGGGTAGCAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: AKVGELLARSGWHSYLFFIQDEI*GWVAAK Trigger: TTTGGCTGCTACCCAACCCAAAATCTCATCTTGAAT...GAAGAAAAGGTAGCTGTGCCAGCCACTTCTGGCAAGCAGTTCTCCCACCTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| CDS-3UTR CAA 90 bp | CCCTTAACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTTGGGTTGGCTCCCATCTTCCTGTTaGAGCTGGACCCGGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: PLTHRDLGIIIQDEILGWLPSSC*SWTRTL Trigger: CAGAGTCCGGGTCCAGCTCAAACAGGAAGATGGGAG...CCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGTTAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| CDS-3UTR CAA 90 bp | ACTACTTTCAGAAACCGCTCTGAAATTCTGGAGCACCAATCCAATTTCATTTGTCTCCCATCTTCCTGTTaGAGCTGGACCCGGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: TTFRNRSEILEHQSNFICLPSSC*SWTRTL Trigger: CAGAGTCCGGGTCCAGCTCAAACAGGAAGATGGGAG...ACAAATGAAATTGGATTGGTGCTCCAGAATTTCAGAGCGGTTTCTGAAAGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505459.6 ENST00000621420.5 |
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| CDS-3UTR CAA 90 bp | CCCTTAACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTTGGGTTGGCCTTTTCTTCCTGCCTaGCACTCATGTAAATATCAG | + |
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Preference number: 5 (lower is better) Translates to: PLTHRDLGIIIQDEILGWPFLPA*HSCKYQ Trigger: CTGATATTTACATGAGTGCAAGGCAGGAAGAAAAGG...CCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGTTAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| CDS-3UTR CAA 90 bp | ATCCAATTTCATTTGTTGAAGGAAAGTGTACCTCAAGGTGCTAAAGCACAGTTACTGCTGGGAGGAATTTaGAGAAATCTCATGCCTATG | + |
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Preference number: 5 (lower is better) Translates to: IQFHLLKESVPQGAKAQLLLGGI*RNLMPM Trigger: CATAGGCATGAGATTTCTCAAAATTCCTCCCAGCAG...TAACTGTGCTTTAGCACCTTGAGGTACACTTTCCTTCAACAAATGAAATTGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| CDS-3UTR CAA 90 bp | ACCACAGTTTCTTCTAGTTTTAGCCTCACACTATGGAAACTTTCACTACATATTTTCAGGGATCCACTCTaGGAATGTATTCCCCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: TTVSSSFSLTLWKLSLHIFRDPL*ECIPQG Trigger: TCCTTGGGGAATACATTCCAAGAGTGGATCCCTGAA...AATATGTAGTGAAAGTTTCCATAGTGTGAGGCTAAAACTAGAAGAAACTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| CDS-3UTR CAA 90 bp | CCCTTAACACATAGGGATTTGGGGATTATAATTCAAGATGAGATTTTGGGTTGGAAACACATCCCCTTATaGTTTTGTTACACAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: PLTHRDLGIIIQDEILGWKHIPL*FCYTAK Trigger: TTTGGCTGTGTAACAAAACAATAAGGGGATGTGTTT...CCAACCCAAAATCTCATCTTGAATTATAATCCCCAAATCCCTATGTGTTAAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000505459.6 |
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| CDS TCA 72 bp | GAGAAACCCGGCAGAAACCCGGGAGGAACCCGGCTCTaGGTTTCCGAGACAGCCCGCTTTTCCGCCGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: EKPGRNPGGTRL*VSETARFSAGS Trigger: ACTTCCGGCGGAAAAGCGGGCTGTCTCGGAAACTCAGAGCCGGGTTCCTCCCGGGTTTCTGCCGGGTTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
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| CDS CAA 72 bp | GAAATGGTTCCGCGTCCGCGATTTCTCATCGCCTGTTaGTTCCGGCACCTGTCGCTCGGCGCCAGGATCTCT | + |
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Preference number: 6 (lower is better) Translates to: EMVPRPRFLIAC*FRHLSLGARIS Trigger: AGAGATCCTGGCGCCGAGCGACAGGTGCCGGAACAAACAGGCGATGAGAAATCGCGGACGCGGAACCATTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503445.5 |
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| CDS CCA 72 bp | CAGCCCGCTTTTCCGCCGGAAGTCCTGCCCAAGAAATaGTTCCGCGTCCGCGATTTCTCATCGCCTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: QPAFPPEVLPKK*FRVRDFSSPVC Trigger: ACAAACAGGCGATGAGAAATCGCGGACGCGGAACCATTTCTTGGGCAGGACTTCCGGCGGAAAAGCGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
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| CDS GCA 72 bp | AGTTTCCGAGACAGCCCGCTTTTCCGCCGGAAGTCCTaGCCAAGAAATGGTTCCGCGTCCGCGATTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SFRDSPLFRRKS*PRNGSASAISH Trigger: ATGAGAAATCGCGGACGCGGAACCATTTCTTGGGCAGGACTTCCGGCGGAAAAGCGGGCTGTCTCGGAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503445.5 |
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