Pregenerated sensors for SRP14 (Homo sapiens)
Ensembl gene IDs: ENSG00000140319Ensembl transcript IDs: ENST00000267884.11, ENST00000558243.1, ENST00000558527.5, ENST00000558720.5, ENST00000559081.1, ENST00000559439.5, ENST00000559475.5, ENST00000560773.5
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | ACAAACTCTCATTTGACTGTGAGAACTCATCGAAACTaGGGAACCATGATGATAAAATTATACAGCCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: TNSHLTVRTHRN*GTMMIKLYSQV Trigger: CACCTGGCTGTATAATTTTATCATCATGGTTCCCCAGTTTCGATGAGTTCTCACAGTCAAATGAGAGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| 3UTR TCA 72 bp | TATACAGCCAGGTGGGAAGCAGCTCATGAGATAACATaGCTTTTTATAAAACTGTCAGGTTTCAATTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: YTARWEAAHEIT*LFIKLSGFNSN Trigger: ATTAGAATTGAAACCTGACAGTTTTATAAAAAGTCATGTTATCTCATGAGCTGCTTCCCACCTGGCTGTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR GCA 90 bp | TCATCGAAACTGGGGAACCATGATGATAAAATTATACAGCCAGGTGGGAAGCAGTGCTGCTGTTGTTGGTaGTGTTGCTGCTGCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSKLGNHDDKIIQPGGKQCCCCW*CCCCGR Trigger: CCTGCCGCAGCAGCAACAGCACCAACAACAGCAGCA...CTGCTTCCCACCTGGCTGTATAATTTTATCATCATGGTTCCCCAGTTTCGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR GCA 90 bp | TCTCATTTGACTGTGAGAACTCATCGAAACTGGGGAACCATGATGATAAAATTATGTTGGTGCTGTTGCTaGTGCGGCAGGTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHLTVRTHRNWGTMMIKLCWCCC*CGRCCC Trigger: GCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACA...TAATTTTATCATCATGGTTCCCCAGTTTCGATGAGTTCTCACAGTCAAATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR CCA 90 bp | CATCGAAACTGGGGAACCATGATGATAAAATTATACAGCCAGGTGGGAAGCAGCAATTATACAGCCAGGTaGGAAGCAGCTCATGAGATA | + |
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Preference number: 4 (lower is better) Translates to: HRNWGTMMIKLYSQVGSSNYTAR*EAAHEI Trigger: TATCTCATGAGCTGCTTCCCACCTGGCTGTATAATT...GCTGCTTCCCACCTGGCTGTATAATTTTATCATCATGGTTCCCCAGTTTCGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR GCA 90 bp | CTCTCATTTGACTGTGAGAACTCATCGAAACTGGGGAACCATGATGATAAAATTTTACTGTGCTGCTGTTaGTGCTGTTGTTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSFDCENSSKLGNHDDKILLCCC*CCCCCC Trigger: ACAGCAGCAACAACAGCAGCAACAGCAGCACAGTAA...AATTTTATCATCATGGTTCCCCAGTTTCGATGAGTTCTCACAGTCAAATGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR GCA 90 bp | CTCTCATTTGACTGTGAGAACTCATCGAAACTGGGGAACCATGATGATAAAATTGTATGCCCTTTACTGTaGTGCTGTTGCTGCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LSFDCENSSKLGNHDDKIVCPLL*CCCCCC Trigger: ACAACAGCAGCAACAGCAGCACAGTAAAGGGCATAC...AATTTTATCATCATGGTTCCCCAGTTTCGATGAGTTCTCACAGTCAAATGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR TCA 90 bp | AGGTGGTTAAACAAACTCTCATTTGACTGTGAGAACTCATCGAAACTGGGGAACGTGGGAAGCAGCTCATaGGATAACATGACTTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: RWLNKLSFDCENSSKLGNVGSSS*DNMTFY Trigger: ATAAAAAGTCATGTTATCTCATGAGCTGCTTCCCAC...GTTCCCCAGTTTCGATGAGTTCTCACAGTCAAATGAGAGTTTGTTTAACCACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR TCA 90 bp | AAACTAGAAAGGAAGACGGTATTAGCATTGAAATTCACACCCTGGCAGCTTTTAATCTCCGGAGAGCAGTaGACCCAAGTATCAATCTTA | + |
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Preference number: 4 (lower is better) Translates to: KLERKTVLALKFTPWQLLISGEQ*TQVSIL Trigger: TAAGATTGATACTTGGGTTCACTGCTCTCCGGAGAT...TAAAAGCTGCCAGGGTGTGAATTTCAATGCTAATACCGTCTTCCTTTCTAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559081.1 |
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| CDS-3UTR TCA 90 bp | AAACTAGAAAGGAAGACGGTATTAGCATTGAAATTCACACCCTGGCAGCTTTTACCAAAACTCACCATCTaGAACTTATTCACTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KLERKTVLALKFTPWQLLPKLTI*NLFTSL Trigger: CAAGGAAGTGAATAAGTTTCAGATGGTGAGTTTTGG...TAAAAGCTGCCAGGGTGTGAATTTCAATGCTAATACCGTCTTCCTTTCTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559081.1 |
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| CDS-3UTR GCA 90 bp | AAACTAGAAAGGAAGACGGTATTAGCATTGAAATTCACACCCTGGCAGCTTTTATATCATACTGACTCTTaGCCTGAGAAGGGAAACATA | + |
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Preference number: 4 (lower is better) Translates to: KLERKTVLALKFTPWQLLYHTDS*PEKGNI Trigger: TATGTTTCCCTTCTCAGGGCAAGAGTCAGTATGATA...TAAAAGCTGCCAGGGTGTGAATTTCAATGCTAATACCGTCTTCCTTTCTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559081.1 |
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| CDS-3UTR CCA 90 bp | CTCTCATTTGACTGTGAGAACTCATCGAAACTGGGGAACCATGATGATAAAATTAGAACTCATCGAAACTaGGGAACCATGATGATAAAA | + |
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Preference number: 4 (lower is better) Translates to: LSFDCENSSKLGNHDDKIRTHRN*GTMMIK Trigger: TTTTATCATCATGGTTCCCCAGTTTCGATGAGTTCT...AATTTTATCATCATGGTTCCCCAGTTTCGATGAGTTCTCACAGTCAAATGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR CCA 90 bp | AAACTAGAAAGGAAGACGGTATTAGCATTGAAATTCACACCCTGGCAGCTTTTATTGAAATTCACACCCTaGCAGCTTTTACTTGAAACA | + |
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Preference number: 4 (lower is better) Translates to: KLERKTVLALKFTPWQLLLKFTP*QLLLET Trigger: TGTTTCAAGTAAAAGCTGCCAGGGTGTGAATTTCAA...TAAAAGCTGCCAGGGTGTGAATTTCAATGCTAATACCGTCTTCCTTTCTAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559081.1 |
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| CDS CCA 90 bp | GGGAAAGGTAGAGGAAGGCGGCGGTCCGCGGCAGACAGACTCCGGTaGCTCCCAGACACCGGGAACCCAGGGAGCATCGCCCGGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: GKGRGRRRSAADRLR*LPDTGNPGSIARLP Trigger: GGGGAGCCGGGCGATGCTCCCTGGGTTCCCGGTGTCTGGGAGCCACCGGAGTCTGTCTGCCGCGGACCGCCGCCTTCCTCTACCTTTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558243.1 ENST00000559439.5 |
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| CDS CCA 90 bp | CTACTATTTTCCGGGCCCGAAGCCCCGAATGTGCTCAGTACAGGGTaGGGAAAGGTAGAGGAAGGCGGCGGTCCGCGGCAGACAGACTCC | + |
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Preference number: 5 (lower is better) Translates to: LLFSGPEAPNVLSTG*GKVEEGGGPRQTDS Trigger: GGAGTCTGTCTGCCGCGGACCGCCGCCTTCCTCTACCTTTCCCCACCCTGTACTGAGCACATTCGGGGCTTCGGGCCCGGAAAATAGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558243.1 ENST00000559439.5 |
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| CDS TCA 90 bp | CGAAGCACGTTAAATTCCACTCAAAGTGGCGGCGTCTGGGATCCCTaGCAAAGAGCCCTGGGCTGCTTGGGGCCCATTGTTACCAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RSTLNSTQSGGVWDP*QRALGCLGPIVTRS Trigger: GCTTCTGGTAACAATGGGCCCCAAGCAGCCCAGGGCTCTTTGTCAGGGATCCCAGACGCCGCCACTTTGAGTGGAATTTAACGTGCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558243.1 ENST00000559439.5 |
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| CDS GCA 90 bp | GGAAATGTATGCCCTTTACTGTGCTGCTGTTGCTGCTGTTGTTGCTaGTGTTGTTGGTGCTGTTGCTGCTGCGGCAGGTGCTGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GNVCPLLCCCCCCCC*CCWCCCCCGRCCCC Trigger: GCAGCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACAACAGCAGCAACAACAGCAGCAACAGCAGCACAGTAAAGGGCATACATTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS GCA 90 bp | GCAGGAAATGTATGCCCTTTACTGTGCTGCTGTTGCTGCTGTTGTTaGTGCTGTTGTTGGTGCTGTTGCTGCTGCGGCAGGTGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AGNVCPLLCCCCCCC*CCCWCCCCCGRCCC Trigger: GCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACAACAGCAGCAACAACAGCAGCAACAGCAGCACAGTAAAGGGCATACATTTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS GCA 90 bp | TGCTGTTGTTGCTGCTGTTGTTGGTGCTGTTGCTGCTGCGGCAGGTaGTGCTGCTGCTGCTGCTGCTGCTGCTTTGGTCTTCTTAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCCWCCCCCGR*CCCCCCCCFGLLSF Trigger: AAAACTAAGAAGACCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACAACAGCAGCAACAACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS GCA 90 bp | TGTTGCTGCTGTTGTTGGTGCTGTTGCTGCTGCGGCAGGTGCTGCTaGTGCTGCTGCTGCTGCTGCTTTGGTCTTCTTAGTTTTGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: CCCCCWCCCCCGRCC*CCCCCCFGLLSFVL Trigger: AAGAACAAAACTAAGAAGACCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACAACAGCAGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS GCA 90 bp | TGTTGTTGCTGCTGTTGTTGGTGCTGTTGCTGCTGCGGCAGGTGCTaGTGCTGCTGCTGCTGCTGCTGCTTTGGTCTTCTTAGTTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCWCCCCCGRC*CCCCCCCFGLLSFV Trigger: AACAAAACTAAGAAGACCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACAACAGCAGCAACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS CCA 90 bp | CGACGGAAACATGTAATATCGAAGCACGTTAAATTCCACTCAAAGTaGCGGCGTCTGGGATCCCTGACAAAGAGCCCTGGGCTGCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RRKHVISKHVKFHSK*RRLGSLTKSPGLLG Trigger: CCCAAGCAGCCCAGGGCTCTTTGTCAGGGATCCCAGACGCCGCCACTTTGAGTGGAATTTAACGTGCTTCGATATTACATGTTTCCGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558243.1 ENST00000559439.5 |
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| CDS GCA 90 bp | GACCTAACCCAGCCCCGCTGCTCTAGTTTTGTTAAACACCTCATCTaGTATCACGGTCTGGCGAAACCCTGGAGAAACTATTATTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: DLTQPRCSSFVKHLI*YHGLAKPWRNYYFH Trigger: GTGGAAATAATAGTTTCTCCAGGGTTTCGCCAGACCGTGATAGCAGATGAGGTGTTTAACAAAACTAGAGCAGCGGGGCTGGGTTAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558243.1 |
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| CDS CCA 90 bp | CCCGCTGCTCTAGTTTTGTTAAACACCTCATCTGCTATCACGGTCTaGCGAAACCCTGGAGAAACTATTATTTCCACGACGGAAACATGT | + |
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Preference number: 5 (lower is better) Translates to: PAALVLLNTSSAITV*RNPGETIISTTETC Trigger: ACATGTTTCCGTCGTGGAAATAATAGTTTCTCCAGGGTTTCGCCAGACCGTGATAGCAGATGAGGTGTTTAACAAAACTAGAGCAGCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558243.1 |
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| CDS-3UTR CAA 90 bp | CATCGAAACTGGGGAACCATGATGATAAAATTATACAGCCAGGTGGGAAGCAGCGCTGCTGCTGCTGCTTaGGTCTTCTTAGTTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: HRNWGTMMIKLYSQVGSSAAAAA*VFLVLF Trigger: GAACAAAACTAAGAAGACCAAAGCAGCAGCAGCAGC...GCTGCTTCCCACCTGGCTGTATAATTTTATCATCATGGTTCCCCAGTTTCGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000267884.11 |
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| CDS-3UTR CAA 90 bp | AAACTAGAAAGGAAGACGGTATTAGCATTGAAATTCACACCCTGGCAGCTTTTAAAGACGGTATTAGCATaGAAATTCACACCCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: KLERKTVLALKFTPWQLLKTVLA*KFTPWQ Trigger: CTGCCAGGGTGTGAATTTCAATGCTAATACCGTCTT...TAAAAGCTGCCAGGGTGTGAATTTCAATGCTAATACCGTCTTCCTTTCTAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559081.1 |
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| CDS-3UTR CAA 90 bp | AAACTAGAAAGGAAGACGGTATTAGCATTGAAATTCACACCCTGGCAGCTTTTAATTGCAGGCAACTTCTaGTTCAACTATAGTATAGGT | + |
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Preference number: 5 (lower is better) Translates to: KLERKTVLALKFTPWQLLIAGNF*FNYSIG Trigger: ACCTATACTATAGTTGAACAAGAAGTTGCCTGCAAT...TAAAAGCTGCCAGGGTGTGAATTTCAATGCTAATACCGTCTTCCTTTCTAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559081.1 |
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| CDS CCA 72 bp | AAAGTGGCGGCGTCTGGGATCCCTGACAAAGAGCCCTaGGCTGCTTGGGGCCCATTGTTACCAGAAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: KVAASGIPDKEP*AAWGPLLPEAT Trigger: GGTTGCTTCTGGTAACAATGGGCCCCAAGCAGCCCAGGGCTCTTTGTCAGGGATCCCAGACGCCGCCACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558243.1 ENST00000559439.5 |
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| CDS TCA 72 bp | TACCAGAAGCAACCTAGGCGGCTCAGTGCTGGGGACTaGGCCAGCTACAATCCCTACTATTTTCCGGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: YQKQPRRLSAGD*ASYNPYYFPGP Trigger: CGGGCCCGGAAAATAGTAGGGATTGTAGCTGGCTCAGTCCCCAGCACTGAGCCGCCTAGGTTGCTTCTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558243.1 ENST00000559439.5 |
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| CDS GCA 72 bp | TGCTGTTGTTGGTGCTGTTGCTGCTGCGGCAGGTGCTaGTGCTGCTGCTGCTGCTGCTGCTTTGGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: CCCWCCCCCGRC*CCCCCCCFGLL Trigger: AAGAAGACCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACAACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS GCA 72 bp | TGTTGTTGGTGCTGTTGCTGCTGCGGCAGGTGCTGCTaGTGCTGCTGCTGCTGCTGCTTTGGTCTTCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: CCWCCCCCGRCC*CCCCCCFGLLS Trigger: ACTAAGAAGACCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS TCA 72 bp | TTAAATTCCACTCAAAGTGGCGGCGTCTGGGATCCCTaGCAAAGAGCCCTGGGCTGCTTGGGGCCCATTGTT | + |
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Preference number: 6 (lower is better) Translates to: LNSTQSGGVWDP*QRALGCLGPIV Trigger: AACAATGGGCCCCAAGCAGCCCAGGGCTCTTTGTCAGGGATCCCAGACGCCGCCACTTTGAGTGGAATTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558243.1 ENST00000559439.5 |
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| CDS GCA 72 bp | TGGTGCTGTTGCTGCTGCGGCAGGTGCTGCTGCTGCTaGTGCTGCTGCTGCTTTGGTCTTCTTAGTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: WCCCCCGRCCCC*CCCCFGLLSFV Trigger: AACAAAACTAAGAAGACCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGCCGCAGCAGCAACAGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS GCA 72 bp | TGTTGGTGCTGTTGCTGCTGCGGCAGGTGCTGCTGCTaGTGCTGCTGCTGCTGCTTTGGTCTTCTTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: CWCCCCCGRCCC*CCCCCFGLLSF Trigger: AAAACTAAGAAGACCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGCCGCAGCAGCAACAGCACCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS CAA 90 bp | AGCAGGAAATGTATGCCCTTTACTGTGCTGCTGTTGCTGCTGTTGTaGCTGCTGTTGTTGGTGCTGTTGCTGCTGCGGCAGGTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SRKCMPFTVLLLLLL*LLLLVLLLLRQVLL Trigger: CAGCAGCACCTGCCGCAGCAGCAACAGCACCAACAACAGCAGCAACAACAGCAGCAACAGCAGCACAGTAAAGGGCATACATTTCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS TCA 72 bp | AAAATGCATCCTGGTGAACACGGCCGCGTACGTGGCTaGGCGGCAGACAAACAGTTAAAACAGAGGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: KMHPGEHGRVRG*AADKQLKQRSG Trigger: CCCACTCCTCTGTTTTAACTGTTTGTCTGCCGCTCAGCCACGTACGCGGCCGTGTTCACCAGGATGCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558243.1 |
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| CDS GCA 72 bp | GCAGGAAATGTATGCCCTTTACTGTGCTGCTGTTGCTaGTGTTGTTGCTGCTGTTGTTGGTGCTGTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AGNVCPLLCCCC*CCCCCCWCCCC Trigger: GCAGCAACAGCACCAACAACAGCAGCAACAACAGCAGCAACAGCAGCACAGTAAAGGGCATACATTTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000267884.11 ENST00000558527.5 ENST00000558720.5 ENST00000559439.5 ENST00000559475.5 ENST00000560773.5 |
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| CDS CCA 72 bp | CATGTAATATCGAAGCACGTTAAATTCCACTCAAAGTaGCGGCGTCTGGGATCCCTGACAAAGAGCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HVISKHVKFHSK*RRLGSLTKSPG Trigger: CCCAGGGCTCTTTGTCAGGGATCCCAGACGCCGCCACTTTGAGTGGAATTTAACGTGCTTCGATATTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558243.1 ENST00000559439.5 |
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| CDS GCA 72 bp | CAGCCCCGCTGCTCTAGTTTTGTTAAACACCTCATCTaGTATCACGGTCTGGCGAAACCCTGGAGAAACTAT | + |
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Preference number: 6 (lower is better) Translates to: QPRCSSFVKHLI*YHGLAKPWRNY Trigger: ATAGTTTCTCCAGGGTTTCGCCAGACCGTGATAGCAGATGAGGTGTTTAACAAAACTAGAGCAGCGGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558243.1 |
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| CDS CAA 72 bp | GGAGCTCACCTCTTGAAATCCCTTAGAAAGGTGGCATaGGGTTTTCTCCCTGGGTTCACAGTGCTGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: GAHLLKSLRKVA*GFLPGFTVLIF Trigger: GAAGATCAGCACTGTGAACCCAGGGAGAAAACCCAATGCCACCTTTCTAAGGGATTTCAAGAGGTGAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559475.5 |
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| CDS CCA 72 bp | TTTGGTTCGACCGTCATCTCATCTGCTATCACGGTCTaGCGAAACCCTGGAGAAACTATTATTTCCACGACG | + |
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Preference number: 6 (lower is better) Translates to: FGSTVISSAITV*RNPGETIISTT Trigger: CGTCGTGGAAATAATAGTTTCTCCAGGGTTTCGCCAGACCGTGATAGCAGATGAGATGACGGTCGAACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559439.5 |
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