Pregenerated sensors for SRI (Homo sapiens)
Ensembl gene IDs: ENSG00000075142Ensembl transcript IDs: ENST00000265729.7, ENST00000419179.5, ENST00000431660.5, ENST00000457606.5, ENST00000472930.6, ENST00000488015.5, ENST00000489079.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATTCCTTCCATTATAAATGTAGTACCTGCTTACTGGAGAATGTTTaGAAAAGCAGTAAGAAGGAAGAAGATGAACTCATGATCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: NSFHYKCSTCLLENV*KSSKKEEDELMILT Trigger: AGTCAGGATCATGAGTTCATCTTCTTCCTTCTTACTGCTTTTCCAAACATTCTCCAGTAAGCAGGTACTACATTTATAATGGAAGGAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR CAA 90 bp | TGTTGTCTCCAGCCATTCAGTACAGCCCAGAGTTCTTTAAATTCATaGAAACCCATTGTGCCAGACATATCTCTATCCAGCATTGAAACC | + |
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Preference number: 2 (lower is better) Translates to: CCLQPFSTAQSSLNS*KPIVPDISLSSIET Trigger: GGTTTCAATGCTGGATAGAGATATGTCTGGCACAATGGGTTTCAATGAATTTAAAGAACTCTGGGCTGTACTGAATGGCTGGAGACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGTGGTAGCCAGATCAATGTTTTGGTACATACTTTCCGATACTCTGCTATTATTCAACAGGTTTTaGAGGGCGTGTGCTAAACTT | + |
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Preference number: 2 (lower is better) Translates to: LPVVARSMFWYILSDTLLLFNRF*RACAKL Trigger: AAGTTTAGCACACGCCCTTCAAAACCTGTTGAATAA...TAGCAGAGTATCGGAAAGTATGTACCAAAACATTGATCTGGCTACCACTGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAGTAAGAAGGAAGAAGATGAACTCATGATCCTGACTCCCAGTGGTAGCCAAAAAGGGACTTGGTaGCAGATAGTATTTGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: KSSKKEEDELMILTPSGSQKGTW*QIVFAN Trigger: ATTGGCAAATACTATCTGTCACCAAGTCCCTTTTTG...GCTACCACTGGGAGTCAGGATCATGAGTTCATCTTCTTCCTTCTTACTGCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGGGTCTTGAACCCAGGTCTCTGAATGCAAATCAAATCATGGTCTCACTAACTCTTTCTAACTTTTaGATCCCTTATGTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: KLGLEPRSLNANQIMVSLTLSNF*IPYVSG Trigger: GCCAGAGACATAAGGGATTCAAAAGTTAGAAAGAGT...TAGTGAGACCATGATTTGATTTGCATTCAGAGACCTGGGTTCAAGACCCAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGATAAAGTGTTGTCTCCAGCCATTCAGTACAGCCCAGAGTTCTTTAAAATCTCTATCCAGCATTaGAACCATAAGCCGGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: KTDKVLSPAIQYSPEFFKISIQH*NHKPAS Trigger: ACTTGCCGGCTTATGGTTTCAATGCTGGATAGAGAT...TTTAAAGAACTCTGGGCTGTACTGAATGGCTGGAGACAACACTTTATCAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| 3UTR-3UTR GCA 90 bp | GATTTAAGTTGTTGCCTGCCTTATGCCCTCAATGAAGAACATAGGTATGCAAAAACCCAGGTCTCTGAATaGAAATCAAATCATGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: DLSCCLPYALNEEHRYAKTQVSE*KSNHGL Trigger: GAGACCATGATTTGATTTGCATTCAGAGACCTGGGT...TTTTGCATACCTATGTTCTTCATTGAGGGCATAAGGCAGGCAACAACTTAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGTGGTAGCCAGATCAATGTTTTGGTACATACTTTCCGATACTCTGCTACAGGAAAGTTCTAAATaGTGTAACAGACTAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: LPVVARSMFWYILSDTLLQESSK*CNRLDL Trigger: AAGATCTAGTCTGTTACACCATTTAGAACTTTCCTG...TAGCAGAGTATCGGAAAGTATGTACCAAAACATTGATCTGGCTACCACTGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR CAA 90 bp | TGCCTGCCTTATGCCCTCAATGAAGAACATAGGTATGCAAAACTATaGAGCTGTTATCTATTCTCAGTGACTGACATGATTTGTTTACAG | + |
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Preference number: 2 (lower is better) Translates to: CLPYALNEEHRYAKL*SCYLFSVTDMICLQ Trigger: CTGTAAACAAATCATGTCAGTCACTGAGAATAGATAACAGCTCAATAGTTTTGCATACCTATGTTCTTCATTGAGGGCATAAGGCAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| 3UTR-3UTR CCA 90 bp | GCATTATCTATAATGACCAAACCACATAGTAAGAGGCACAAGCCAGCATTAGAAGTAGTACCTGCTTACTaGAGAATGTTTGGAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ALSIMTKPHSKRHKPALEVVPAY*RMFGKA Trigger: TGCTTTTCCAAACATTCTCCAGTAAGCAGGTACTAC...TTCTAATGCTGGCTTGTGCCTCTTACTATGTGGTTTGGTCATTATAGATAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAAAGATGGGGAAACTGAAACTGGGCATTATCTATAATGACCAAACCACACAAGAAAATAAGGCATaGCTGATAATGGCTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FSKMGKLKLGIIYNDQTTQENKA*LIMAQE Trigger: TTCCTGAGCCATTATCAGTCATGCCTTATTTTCTTG...TGTGGTTTGGTCATTATAGATAATGCCCAGTTTCAGTTTCCCCATCTTTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR TCA 90 bp | AACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACTACGCTAAACTTCTAAGGTaGATCCTGACGTGGATTACT | + |
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Preference number: 2 (lower is better) Translates to: NRNIVSASCINTLHIQNYAKLLR*ILTWIT Trigger: AGTAATCCACGTCAGGATTCACCTTAGAAGTTTAGC...GTAGTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGCAAGAAAATAAGGCATaGCTGATAATGGCTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEQENKA*LIMAQE Trigger: TTCCTGAGCCATTATCAGTCATGCCTTATTTTCTTG...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACCAAAGATGGGGAAACTaGAACTGGGCATTATCTATA | + |
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Preference number: 2 (lower is better) Translates to: RNRNIVSASCINTLHIQNQRWGN*NWALSI Trigger: TATAGATAATGCCCAGTTTCAGTTTCCCCATCTTTG...GTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR GCA 90 bp | GCATTATCTATAATGACCAAACCACATAGTAAGAGGCACAAGCCAGCATTAGAATTTATTTCACCCAAGTaGGTCTATGTCATTTACCTA | + |
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Preference number: 2 (lower is better) Translates to: ALSIMTKPHSKRHKPALEFISPK*VYVIYL Trigger: TAGGTAAATGACATAGACGCACTTGGGTGAAATAAA...TTCTAATGCTGGCTTGTGCCTCTTACTATGTGGTTTGGTCATTATAGATAATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTTTTTATGTGTGGAGTATTCTTTGTAGGAGAGGAAAGATAACAGCTGTAAAGGAGAGCTCCAGTTaGAATGTTGATTACATTCAT | + |
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Preference number: 2 (lower is better) Translates to: LSFYVWSILCRRGKITAVKESSS*NVDYIH Trigger: ATGAATGTAATCAACATTCCAACTGGAGCTCTCCTT...TACAGCTGTTATCTTTCCTCTCCTACAAAGAATACTCCACACATAAAAACTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| 3UTR-3UTR CCA 90 bp | TATTCAGAACTACTCCCAAGAGATAACATATTATCTCCTTTTCAAAGATGGGGAGCCAGATCAATGTTTTaGTACATACTTTCCGATACT | + |
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Preference number: 2 (lower is better) Translates to: YSELLPRDNILSPFQRWGARSMF*YILSDT Trigger: AGTATCGGAAAGTATGTACCAAAACATTGATCTGGC...TCCCCATCTTTGAAAAGGAGATAATATGTTATCTCTTGGGAGTAGTTCTGAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR GCA 90 bp | AACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACTACTATAAATGTAGTACCTaGTTACTGGAGAATGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: NRNIVSASCINTLHIQNYYKCST*LLENVW Trigger: CCAAACATTCTCCAGTAAGCAGGTACTACATTTATA...GTAGTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGCAGGAAAGTTCTAAATaGTGTAACAGACTAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEQESSK*CNRLDL Trigger: AAGATCTAGTCTGTTACACCATTTAGAACTTTCCTG...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| 3UTR TCA 72 bp | GGTATGGTGGCACATGCCTATAGTCCCTCAGGAGGCTaGGGCAGGAGAATCGCTAGAACCCGAGACGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GMVAHAYSPSGG*GRRIARTRDVE Trigger: CTCCACGTCTCGGGTTCTAGCGATTCTCCTGCCTCAGCCTCCTGAGGGACTATAGGCATGTGCCACCATACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGTCTGTAAGAGCCCTCAGTTTGACGCAGCAGGCGATGTAGTCGTCGAAGGTTGTATCGTTTTGCAATaGAATTCACAGCCTGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: AVCKSPQFDAAGDVVVEGCIVLQ*NSQPGD Trigger: GTCCCCAGGCTGTGAATTCAATTGCAAAACGATACA...ACCTTCGACGACTACATCGCCTGCTGCGTCAAACTGAGGGCTCTTACAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGTCTGTAAGAGCCCTCAGTTTGACGCAGCAGGCGATGTAGTCGTCGAAGGTAAAACTGATAAAGTGTaGTCTCCAGCCATTCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: AVCKSPQFDAAGDVVVEGKTDKV*SPAIQY Trigger: GTACTGAATGGCTGGAGACAACACTTTATCAGTTTT...ACCTTCGACGACTACATCGCCTGCTGCGTCAAACTGAGGGCTCTTACAGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| 3UTR TCA 72 bp | GATAACATATTATCTCCTTTTCAAAGATGGGGAAACTaGAACTGGGCATTATCTATAATGACCAAACCACAT | + |
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Preference number: 3 (lower is better) Translates to: DNILSPFQRWGN*NWALSIMTKPH Trigger: ATGTGGTTTGGTCATTATAGATAATGCCCAGTTTCAGTTTCCCCATCTTTGAAAAGGAGATAATATGTTATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR GCA 90 bp | GCTGTCTGTAAGAGCCCTCAGTTTGACGCAGCAGGCGATGTAGTCGTCGAAGGTCCGCCGGCGCCAGGATaGCCCGGGTACGCCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: AVCKSPQFDAAGDVVVEGPPAPG*PGYAML Trigger: CAGCATGGCGTACCCGGGGCATCCTGGCGCCGGCGG...ACCTTCGACGACTACATCGCCTGCTGCGTCAAACTGAGGGCTCTTACAGACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR GCA 90 bp | GCTGTCTGTAAGAGCCCTCAGTTTGACGCAGCAGGCGATGTAGTCGTCGAAGGTCGCCATGCTGCAGACTaGGCCGCAGCCGCCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: AVCKSPQFDAAGDVVVEGRHAAD*AAAALA Trigger: GGCGAGGGCGGCTGCGGCGCAGTCTGCAGCATGGCG...ACCTTCGACGACTACATCGCCTGCTGCGTCAAACTGAGGGCTCTTACAGACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR GCA 90 bp | AAAACTGATAAAGTGTTGTCTCCAGCCATTCAGTACAGCCCAGAGTTCTTTAAACCGGGTACGCCATGCTaGAGACTGCGCCGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: KTDKVLSPAIQYSPEFFKPGTPC*RLRRSR Trigger: GCGGCTGCGGCGCAGTCTGCAGCATGGCGTACCCGG...TTTAAAGAACTCTGGGCTGTACTGAATGGCTGGAGACAACACTTTATCAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR GCA 90 bp | AAAACTGATAAAGTGTTGTCTCCAGCCATTCAGTACAGCCCAGAGTTCTTTAAAGCCCCGGGTACGCCATaGTGCAGACTGCGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KTDKVLSPAIQYSPEFFKAPGTP*CRLRRS Trigger: GCTGCGGCGCAGTCTGCAGCATGGCGTACCCGGGGC...TTTAAAGAACTCTGGGCTGTACTGAATGGCTGGAGACAACACTTTATCAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR GCA 90 bp | AGAAACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACCCGCCGGCGCCAGGATaGCCCGGGTACGCCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: RNRNIVSASCINTLHIQNPPAPG*PGYAML Trigger: CAGCATGGCGTACCCGGGGCATCCTGGCGCCGGCGG...GTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR GCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGCCGCCGGCGCCAGGATaGCCCGGGTACGCCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEPPAPG*PGYAML Trigger: CAGCATGGCGTACCCGGGGCATCCTGGCGCCGGCGG...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR TCA 90 bp | TACAACAAGCTGGGTCTTGAACCCAGGTCTCTGAATGCAAATCAAATCATGGTCCCATACAGCGGATCCTaGGTTTGTCCGGGAAACGCA | + |
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Preference number: 4 (lower is better) Translates to: YNKLGLEPRSLNANQIMVPYSGS*VCPGNA Trigger: TGCGTTTCCCGGACAAACTCAGGATCCGCTGTATGG...GACCATGATTTGATTTGCATTCAGAGACCTGGGTTCAAGACCCAGCTTGTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR TCA 90 bp | AAAAGCAGTAAGAAGGAAGAAGATGAACTCATGATCCTGACTCCCAGTGGTAGCTTCACAACACCTTGCTaGGCAGTATCCCGTCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: KSSKKEEDELMILTPSGSFTTPC*AVSRLR Trigger: TCGAAGACGGGATACTGCTCAGCAAGGTGTTGTGAA...GCTACCACTGGGAGTCAGGATCATGAGTTCATCTTCTTCCTTCTTACTGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | AAAACTGATAAAGTGTTGTCTCCAGCCATTCAGTACAGCCCAGAGTTCTTTAAACCATACAGCGGATCCTaGGTTTGTCCGGGAAACGCA | + |
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Preference number: 4 (lower is better) Translates to: KTDKVLSPAIQYSPEFFKPYSGS*VCPGNA Trigger: TGCGTTTCCCGGACAAACTCAGGATCCGCTGTATGG...TTTAAAGAACTCTGGGCTGTACTGAATGGCTGGAGACAACACTTTATCAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR TCA 90 bp | GATTTAAGTTGTTGCCTGCCTTATGCCCTCAATGAAGAACATAGGTATGCAAAACAACAAGCTGGGTCTTaGACCCAGGTCTCTGAATGC | + |
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Preference number: 4 (lower is better) Translates to: DLSCCLPYALNEEHRYAKQQAGS*TQVSEC Trigger: GCATTCAGAGACCTGGGTTCAAGACCCAGCTTGTTG...TTTTGCATACCTATGTTCTTCATTGAGGGCATAAGGCAGGCAACAACTTAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR TCA 90 bp | TGTTTTTCAAGGGCATTTCTAATAGAAATCTTACAATGGCTCAGTGAAAAAGGCACGTGGAGGTTGCAGTaGGCTGACATTGCGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: CFSRAFLIEILQWLSEKGTWRLQ*ADIAPL Trigger: CAGTGGCGCAATGTCAGCTCACTGCAACCTCCACGT...GCCTTTTTCACTGAGCCATTGTAAGATTTCTATTAGAAATGCCCTTGAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR TCA 90 bp | TACAGAAGACAAAAGCAGATAGTATATCTGCATAGTGTTTTTCAAGGGCATTTCAGTCCCTCAGGAGGCTaGGGCAGGAGAATCGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: YRRQKQIVYLHSVFQGHFSPSGG*GRRIAR Trigger: TCTAGCGATTCTCCTGCCTCAGCCTCCTGAGGGACT...GAAATGCCCTTGAAAAACACTATGCAGATATACTATCTGCTTTTGTCTTCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR TCA 90 bp | AGAAACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACCCATACAGCGGATCCTaGGTTTGTCCGGGAAACGCA | + |
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Preference number: 4 (lower is better) Translates to: RNRNIVSASCINTLHIQNPYSGS*VCPGNA Trigger: TGCGTTTCCCGGACAAACTCAGGATCCGCTGTATGG...GTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGCCATACAGCGGATCCTaGGTTTGTCCGGGAAACGCA | + |
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Preference number: 4 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEPYSGS*VCPGNA Trigger: TGCGTTTCCCGGACAAACTCAGGATCCGCTGTATGG...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR TCA 90 bp | CACAGAAACATACAATATAATGGACCTAGAAGGAAAGCCCTACCTCCAGCTGTTGTATCGTTTTGCAATTaGATTCACAGCCTGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: HRNIQYNGPRRKALPPAVVSFCN*IHSLGT Trigger: AGTCCCCAGGCTGTGAATTCAATTGCAAAACGATAC...AACAGCTGGAGGTAGGGCTTTCCTTCTAGGTCCATTATATTGTATGTTTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR TCA 90 bp | GATTTAAGTTGTTGCCTGCCTTATGCCCTCAATGAAGAACATAGGTATGCAAAATTCACAACACCTTGCTaGGCAGTATCCCGTCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: DLSCCLPYALNEEHRYAKFTTPC*AVSRLR Trigger: TCGAAGACGGGATACTGCTCAGCAAGGTGTTGTGAA...TTTTGCATACCTATGTTCTTCATTGAGGGCATAAGGCAGGCAACAACTTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR TCA 90 bp | AAAACTGATAAAGTGTTGTCTCCAGCCATTCAGTACAGCCCAGAGTTCTTTAAATTCACAACACCTTGCTaGGCAGTATCCCGTCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: KTDKVLSPAIQYSPEFFKFTTPC*AVSRLR Trigger: TCGAAGACGGGATACTGCTCAGCAAGGTGTTGTGAA...TTTAAAGAACTCTGGGCTGTACTGAATGGCTGGAGACAACACTTTATCAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR TCA 90 bp | CTCCCAGTGGTAGCCAGATCAATGTTTTGGTACATACTTTCCGATACTCTGCTACAAAAAGGGACTTGGTaGCAGATAGTATTTGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LPVVARSMFWYILSDTLLQKGTW*QIVFAN Trigger: ATTGGCAAATACTATCTGTCACCAAGTCCCTTTTTG...TAGCAGAGTATCGGAAAGTATGTACCAAAACATTGATCTGGCTACCACTGGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | AAGCTGGGTCTTGAACCCAGGTCTCTGAATGCAAATCAAATCATGGTCTCACTATACTGCATCTTGAGTTaGAGTCTTATAGGTAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: KLGLEPRSLNANQIMVSLYCILS*SLIGRS Trigger: GCTTCTACCTATAAGACTTCAACTCAAGATGCAGTA...TAGTGAGACCATGATTTGATTTGCATTCAGAGACCTGGGTTCAAGACCCAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR GCA 90 bp | AAGCTGGGTCTTGAACCCAGGTCTCTGAATGCAAATCAAATCATGGTCTCACTATGTGATTTAAGTTGTTaGCTGCCTTATGCCCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: KLGLEPRSLNANQIMVSLCDLSC*LPYALN Trigger: ATTGAGGGCATAAGGCAGGCAACAACTTAAATCACA...TAGTGAGACCATGATTTGATTTGCATTCAGAGACCTGGGTTCAAGACCCAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| 3UTR CAA 72 bp | ATGATCCTGACTCCCAGTGGTAGCCAGATCAATGTTTaGGTACATACTTTCCGATACTCTGCTATGTGTATT | + |
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Preference number: 4 (lower is better) Translates to: MILTPSGSQINV*VHTFRYSAMCI Trigger: AATACACATAGCAGAGTATCGGAAAGTATGTACCAAAACATTGATCTGGCTACCACTGGGAGTCAGGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | CTAAGTTTTTATGTGTGGAGTATTCTTTGTAGGAGAGGAAAGATAACAGCTGTATTCACAACACCTTGCTaGGCAGTATCCCGTCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: LSFYVWSILCRRGKITAVFTTPC*AVSRLR Trigger: TCGAAGACGGGATACTGCTCAGCAAGGTGTTGTGAA...TACAGCTGTTATCTTTCCTCTCCTACAAAGAATACTCCACACATAAAAACTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR TCA 90 bp | GCTAATTTCAAAGGGATACCCATCTGGTGTACATCCTTTTCATCTACTGTATCTATAGGTAGAAGCTGGTaGTCCTTAGAGGATTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ANFKGIPIWCTSFSSTVSIGRSW*SLEDCL Trigger: AAGGCAATCCTCTAAGGATCACCAGCTTCTACCTAT...AGATACAGTAGATGAAAAGGATGTACACCAGATGGGTATCCCTTTGAAATTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR GCA 90 bp | AAAAGCAGTAAGAAGGAAGAAGATGAACTCATGATCCTGACTCCCAGTGGTAGCCAGAAACATTGTCAGTaGTTCTTGTATCAACACACT | + |
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Preference number: 4 (lower is better) Translates to: KSSKKEEDELMILTPSGSQKHCQ*FLYQHT Trigger: AGTGTGTTGATACAAGAAGCACTGACAATGTTTCTG...GCTACCACTGGGAGTCAGGATCATGAGTTCATCTTCTTCCTTCTTACTGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | TCTGGCATCCTTAACCTTAAGATATTCTTAACAGCTAATTTCAAAGGGATACCCGTATCGTTTTGCAATTaGATTCACAGCCTGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: SGILNLKIFLTANFKGIPVSFCN*IHSLGT Trigger: AGTCCCCAGGCTGTGAATTCAATTGCAAAACGATAC...GGGTATCCCTTTGAAATTAGCTGTTAAGAATATCTTAAGGTTAAGGATGCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR TCA 90 bp | GCATTATCTATAATGACCAAACCACATAGTAAGAGGCACAAGCCAGCATTAGAAGCTAAACTTCTAAGGTaGATCCTGACGTGGATTACT | + |
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Preference number: 4 (lower is better) Translates to: ALSIMTKPHSKRHKPALEAKLLR*ILTWIT Trigger: AGTAATCCACGTCAGGATTCACCTTAGAAGTTTAGC...TTCTAATGCTGGCTTGTGCCTCTTACTATGTGGTTTGGTCATTATAGATAATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR GCA 90 bp | CTCCCAGTGGTAGCCAGATCAATGTTTTGGTACATACTTTCCGATACTCTGCTATATAAATGTAGTACCTaGTTACTGGAGAATGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LPVVARSMFWYILSDTLLYKCST*LLENVW Trigger: CCAAACATTCTCCAGTAAGCAGGTACTACATTTATA...TAGCAGAGTATCGGAAAGTATGTACCAAAACATTGATCTGGCTACCACTGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR CCA 90 bp | GATTTAAGTTGTTGCCTGCCTTATGCCCTCAATGAAGAACATAGGTATGCAAAAATAAATACAACAAGCTaGGTCTTGAACCCAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: DLSCCLPYALNEEHRYAKINTTS*VLNPGL Trigger: GAGACCTGGGTTCAAGACCCAGCTTGTTGTATTTAT...TTTTGCATACCTATGTTCTTCATTGAGGGCATAAGGCAGGCAACAACTTAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR TCA 90 bp | TATTCAGAACTACTCCCAAGAGATAACATATTATCTCCTTTTCAAAGATGGGGAATCTCTATCCAGCATTaGAACCATAAGCCGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: YSELLPRDNILSPFQRWGISIQH*NHKPAS Trigger: ACTTGCCGGCTTATGGTTTCAATGCTGGATAGAGAT...TCCCCATCTTTGAAAAGGAGATAATATGTTATCTCTTGGGAGTAGTTCTGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | TATTCAGAACTACTCCCAAGAGATAACATATTATCTCCTTTTCAAAGATGGGGAGTATCGTTTTGCAATTaGATTCACAGCCTGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: YSELLPRDNILSPFQRWGVSFCN*IHSLGT Trigger: AGTCCCCAGGCTGTGAATTCAATTGCAAAACGATAC...TCCCCATCTTTGAAAAGGAGATAATATGTTATCTCTTGGGAGTAGTTCTGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | GCATTATCTATAATGACCAAACCACATAGTAAGAGGCACAAGCCAGCATTAGAATTATTCAACAGGTTTTaGAGGGCGTGTGCTAAACTT | + |
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Preference number: 4 (lower is better) Translates to: ALSIMTKPHSKRHKPALELFNRF*RACAKL Trigger: AAGTTTAGCACACGCCCTTCAAAACCTGTTGAATAA...TTCTAATGCTGGCTTGTGCCTCTTACTATGTGGTTTGGTCATTATAGATAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGGCTAAACTTCTAAGGTaGATCCTGACGTGGATTACT | + |
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Preference number: 4 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEAKLLR*ILTWIT Trigger: AGTAATCCACGTCAGGATTCACCTTAGAAGTTTAGC...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR TCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGGTATCGTTTTGCAATTaGATTCACAGCCCAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEVSFCN*IHSPEF Trigger: GAACTCTGGGCTGTGAATTCAATTGCAAAACGATAC...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419179.5 |
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| CDS-3UTR CCA 90 bp | TTTTCAAAGATGGGGAAACTGAAACTGGGCATTATCTATAATGACCAAACCACAGTAGTACCTGCTTACTaGAGAATGTTTGGAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: FSKMGKLKLGIIYNDQTTVVPAY*RMFGKA Trigger: TGCTTTTCCAAACATTCTCCAGTAAGCAGGTACTAC...TGTGGTTTGGTCATTATAGATAATGCCCAGTTTCAGTTTCCCCATCTTTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGTTATTCAACAGGTTTTaGAGGGCGTGTGCTAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FYFTQVRLCHLPKFLCVELFNRF*RACAKL Trigger: AAGTTTAGCACACGCCCTTCAAAACCTGTTGAATAA...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR TCA 90 bp | CTAAGTTTTTATGTGTGGAGTATTCTTTGTAGGAGAGGAAAGATAACAGCTGTACAAAAAGGGACTTGGTaGCAGATAGTATTTGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LSFYVWSILCRRGKITAVQKGTW*QIVFAN Trigger: ATTGGCAAATACTATCTGTCACCAAGTCCCTTTTTG...TACAGCTGTTATCTTTCCTCTCCTACAAAGAATACTCCACACATAAAAACTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR TCA 90 bp | AACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACTACCAAAGATGGGGAAACTaGAACTGGGCATTATCTATA | + |
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Preference number: 4 (lower is better) Translates to: NRNIVSASCINTLHIQNYQRWGN*NWALSI Trigger: TATAGATAATGCCCAGTTTCAGTTTCCCCATCTTTG...GTAGTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | TCTGGCATCCTTAACCTTAAGATATTCTTAACAGCTAATTTCAAAGGGATACCCGGTATGCAAAACTATTaGGCTGTTATCTATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGILNLKIFLTANFKGIPGMQNY*AVIYSQ Trigger: CTGAGAATAGATAACAGCTCAATAGTTTTGCATACC...GGGTATCCCTTTGAAATTAGCTGTTAAGAATATCTTAAGGTTAAGGATGCCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR TCA 90 bp | AGAAACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACACACTCATGACACATTaGATGAAATCATCATATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNRNIVSASCINTLHIQNTLMTH*MKSSYG Trigger: CCCATATGATGATTTCATTCAATGTGTCATGAGTGT...GTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR TCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGACACTCATGACACATTaGATGAAATCATCATATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FYFTQVRLCHLPKFLCVETLMTH*MKSSYG Trigger: CCCATATGATGATTTCATTCAATGTGTCATGAGTGT...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR CCA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGAAGGAGAGCTCCAGTTaGAATGTTGATTACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEKESSS*NVDYIH Trigger: ATGAATGTAATCAACATTCCAACTGGAGCTCTCCTT...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR CCA 90 bp | AGAAACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACGCCAGATCAATGTTTTaGTACATACTTTCCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: RNRNIVSASCINTLHIQNARSMF*YILSDT Trigger: AGTATCGGAAAGTATGTACCAAAACATTGATCTGGC...GTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| 3UTR CAA 72 bp | TATGCCCTCAATGAAGAACATAGGTATGCAAAACTATaGAGCTGTTATCTATTCTCAGTGACTGACATGATT | + |
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Preference number: 4 (lower is better) Translates to: YALNEEHRYAKL*SCYLFSVTDMI Trigger: AATCATGTCAGTCACTGAGAATAGATAACAGCTCAATAGTTTTGCATACCTATGTTCTTCATTGAGGGCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR GCA 90 bp | AGAAACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACTTTATTTCACCCAAGTaGGTCTATGTCATTTACCTA | + |
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Preference number: 4 (lower is better) Translates to: RNRNIVSASCINTLHIQNFISPK*VYVIYL Trigger: TAGGTAAATGACATAGACGCACTTGGGTGAAATAAA...GTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTTTCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR GCA 90 bp | CTAAGTTTTTATGTGTGGAGTATTCTTTGTAGGAGAGGAAAGATAACAGCTGTATTTATTTCACCCAAGTaGGTCTATGTCATTTACCTA | + |
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Preference number: 4 (lower is better) Translates to: LSFYVWSILCRRGKITAVFISPK*VYVIYL Trigger: TAGGTAAATGACATAGACGCACTTGGGTGAAATAAA...TACAGCTGTTATCTTTCCTCTCCTACAAAGAATACTCCACACATAAAAACTTAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR CCA 90 bp | AACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACTACCAGGAAAGTTCTAAATaGTGTAACAGACTAGATCTT | + |
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Preference number: 4 (lower is better) Translates to: NRNIVSASCINTLHIQNYQESSK*CNRLDL Trigger: AAGATCTAGTCTGTTACACCATTTAGAACTTTCCTG...GTAGTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR CAA 90 bp | GCTGTCTGTAAGAGCCCTCAGTTTGACGCAGCAGGCGATGTAGTCGTCGAAGGTCACAGACGAACAAGTTaGTATCCTCCAGCAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: AVCKSPQFDAAGDVVVEGHRRTS*YPPAMP Trigger: TGGCATTGCTGGAGGATACAAACTTGTTCGTCTGTG...ACCTTCGACGACTACATCGCCTGCTGCGTCAAACTGAGGGCTCTTACAGACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR CAA 90 bp | TACAACAAGCTGGGTCTTGAACCCAGGTCTCTGAATGCAAATCAAATCATGGTCAAAACTGATAAAGTGTaGTCTCCAGCCATTCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: YNKLGLEPRSLNANQIMVKTDKV*SPAIQY Trigger: GTACTGAATGGCTGGAGACAACACTTTATCAGTTTT...GACCATGATTTGATTTGCATTCAGAGACCTGGGTTCAAGACCCAGCTTGTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS-3UTR CAA 90 bp | CAATATAATGGACCTAGAAGGAAAGCCCTACCTCCAGCTGTTTCTCTCAACCTTAAAACTGATAAAGTGTaGTCTCCAGCCATTCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QYNGPRRKALPPAVSLNLKTDKV*SPAIQY Trigger: GTACTGAATGGCTGGAGACAACACTTTATCAGTTTT...AAGGTTGAGAGAAACAGCTGGAGGTAGGGCTTTCCTTCTAGGTCCATTATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457606.5 |
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| CDS-3UTR CAA 90 bp | CTCCCAGTGGTAGCCAGATCAATGTTTTGGTACATACTTTCCGATACTCTGCTAATGACAAAAAGGGACTaGGTGACAGATAGTATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPVVARSMFWYILSDTLLMTKRD*VTDSIC Trigger: GCAAATACTATCTGTCACCAAGTCCCTTTTTGTCAT...TAGCAGAGTATCGGAAAGTATGTACCAAAACATTGATCTGGCTACCACTGGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR CAA 90 bp | TTTTCAAAGATGGGGAAACTGAAACTGGGCATTATCTATAATGACCAAACCACATGTATCGTTTTGCAATaGAATTCACAGCCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSKMGKLKLGIIYNDQTTCIVLQ*NSQPGD Trigger: GTCCCCAGGCTGTGAATTCAATTGCAAAACGATACA...TGTGGTTTGGTCATTATAGATAATGCCCAGTTTCAGTTTCCCCATCTTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR CAA 90 bp | TGTTTTTCAAGGGCATTTCTAATAGAAATCTTACAATGGCTCAGTGAAAAAGGCTGTATCGTTTTGCAATaGAATTCACAGCCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CFSRAFLIEILQWLSEKGCIVLQ*NSQPGD Trigger: GTCCCCAGGCTGTGAATTCAATTGCAAAACGATACA...GCCTTTTTCACTGAGCCATTGTAAGATTTCTATTAGAAATGCCCTTGAAAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000431660.5 |
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| CDS TCA 90 bp | AAAATTATTCTAGACAACAATCAAAGTAAAGGATACATCCAGCATTaGAACCATAAGCCGGCAAGTCTCCAGGTTAAAAGGTTTGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: KIILDNNQSKGYIQH*NHKPASLQVKRFVS Trigger: GGATACAAACCTTTTAACCTGGAGACTTGCCGGCTTATGGTTTCAATGCTGGATGTATCCTTTACTTTGATTGTTGTCTAGAATAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000488015.5 ENST00000489079.1 |
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| CDS-3UTR CAA 90 bp | CTAAGTTTTTATGTGTGGAGTATTCTTTGTAGGAGAGGAAAGATAACAGCTGTAAAAACTGATAAAGTGTaGTCTCCAGCCATTCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LSFYVWSILCRRGKITAVKTDKV*SPAIQY Trigger: GTACTGAATGGCTGGAGACAACACTTTATCAGTTTT...TACAGCTGTTATCTTTCCTCTCCTACAAAGAATACTCCACACATAAAAACTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR CAA 90 bp | CTAAGTTTTTATGTGTGGAGTATTCTTTGTAGGAGAGGAAAGATAACAGCTGTAATGACAAAAAGGGACTaGGTGACAGATAGTATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSFYVWSILCRRGKITAVMTKRD*VTDSIC Trigger: GCAAATACTATCTGTCACCAAGTCCCTTTTTGTCAT...TACAGCTGTTATCTTTCCTCTCCTACAAAGAATACTCCACACATAAAAACTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000265729.7 ENST00000419179.5 |
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| CDS-3UTR CAA 90 bp | AGAAACAGAAACATTGTCAGTGCTTCTTGTATCAACACACTTCATATTCAGAACAGCCAGATCAATGTTTaGGTACATACTTTCCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: RNRNIVSASCINTLHIQNSQINV*VHTFRY Trigger: GTATCGGAAAGTATGTACCAAAACATTGATCTGGCT...GTTCTGAATATGAAGTGTGTTGATACAAGAAGCACTGACAATGTTTCTGTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR CAA 90 bp | CTAAGTTTTTATGTGTGGAGTATTCTTTGTAGGAGAGGAAAGATAACAGCTGTATGTATCGTTTTGCAATaGAATTCACAGCCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSFYVWSILCRRGKITAVCIVLQ*NSQPRV Trigger: AACTCTGGGCTGTGAATTCAATTGCAAAACGATACA...TACAGCTGTTATCTTTCCTCTCCTACAAAGAATACTCCACACATAAAAACTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419179.5 |
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| CDS-3UTR CAA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGCATTGTCAGTGCTTCTaGTATCAACACACTTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEHCQCF*YQHTSY Trigger: ATATGAAGTGTGTTGATACAAGAAGCACTGACAATG...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS-3UTR CAA 90 bp | TTTTATTTCACCCAAGTGCGTCTATGTCATTTACCTAAGTTTTTATGTGTGGAGCAACTAGTTGTTCAGTaGAATGGTAAGTTTCACACT | + |
|
Preference number: 5 (lower is better) Translates to: FYFTQVRLCHLPKFLCVEQLVVQ*NGKFHT Trigger: AGTGTGAAACTTACCATTCAACTGAACAACTAGTTG...CTCCACACATAAAAACTTAGGTAAATGACATAGACGCACTTGGGTGAAATAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265729.7 |
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| CDS GCA 72 bp | AGGCTGTACTTTGTGGGTGCTTCAGGCTATGCTGTTTaGCCTTCTGTCCTAGCATCATCTCTGGTACTAATA | + |
|
Preference number: 6 (lower is better) Translates to: RLYFVGASGYAV*PSVLASSLVLI Trigger: TATTAGTACCAGAGATGATGCTAGGACAGAAGGGCAAACAGCATAGCCTGAAGCACCCACAAAGTACAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472930.6 |
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