RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRGAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000196220

Ensembl transcript IDs: ENST00000360413.7, ENST00000383836.8, ENST00000433332.7, ENST00000470951.5, ENST00000475560.5, ENST00000480750.3, ENST00000485983.6, ENST00000490348.1, ENST00000490889.2, ENST00000491467.1, ENST00000520860.1, ENST00000618999.4

Found 1343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCTaGAGCCAGCGCCCGGGCCTCAGCTCTGCACAGACACACCCTCCC +
Preference number: 1 (lower is better)
Translates to: LTRERSVGFPWLDVS*SQRPGLSSAQTHPP
Trigger: GGGAGGGTGTGTCTGTGCAGAGCTGAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp TCCTCTGGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATaGCTGGACGTGAGCTGCAGCCAGCGCCCGGGCCTCAGCTCTGCA +
Preference number: 1 (lower is better)
Translates to: SSGRLLTRERSVGFP*LDVSCSQRPGLSSA
Trigger: TGCAGAGCTGAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACCAGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 90 bp ACTGCCCCTCCCTGGCCCCAGTCTGAACTGGGCGCTCACGGCTCATaGGTTTCATGCAAGACGGCACCAGCCACAGTGCATCACAGCCTG +
Preference number: 1 (lower is better)
Translates to: TAPPWPQSELGAHGS*VSCKTAPATVHHSL
Trigger: CAGGCTGTGATGCACTGTGGCTGGTGCCGTCTTGCATGAAACGCATGAGCCGTGAGCGCCCAGTTCAGACTGGGGCCAGGGAGGGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp TCTAGGACAGAAAGTGCCAAGGACTGCCCCTCCCTGGCCCCAGTCTaGACTGGGCGCTCACGGCTCATGCGTTTCATGCAAGACGGCACC +
Preference number: 1 (lower is better)
Translates to: SRTESAKDCPSLAPV*TGRSRLMRFMQDGT
Trigger: GGTGCCGTCTTGCATGAAACGCATGAGCCGTGAGCGCCCAGTTCAGACTGGGGCCAGGGAGGGGCAGTCCTTGGCACTTTCTGTCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp TGGCCTCGAGAGAGAGGAAGCGTGGGAACAGTAGGGAAAAGCCCCTaGGTCTCGCAGGAGAGGGTAAGTAACAGCGGCCCACAGGGCACA +
Preference number: 1 (lower is better)
Translates to: WPRERGSVGTVGKSP*VSQERVSNSGPQGT
Trigger: TGTGCCCTGTGGGCCGCTGTTACTTACCCTCTCCTGCGAGACCCAGGGGCTTTTCCCTACTGTTCCCACGCTTCCTCTCTCTCGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp GATGTGGTAGTCAGGGGTCTTCTCGCCAACCTTCTCCCATGCCTTTaGGAGTACAGTTGGCCTTTGGCCTCCGGGTGGAAGGGCAGGGTC +
Preference number: 1 (lower is better)
Translates to: DVVVRGLLANLLPCL*EYSWPLASGWKGRV
Trigger: GACCCTGCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGGCATGGGAGAAGGTTGGCGAGAAGACCCCTGACTACCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp GGACACTGGCAGATCAATCTCAGGGAGGTCAGGAGGGCTTGGACCTaGCAGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGCTTTGGAT +
Preference number: 1 (lower is better)
Translates to: GHWQINLREVRRAWT*QQSPFSRLPWAALD
Trigger: ATCCAAAGCTGCCCAGGGGAGCCGAGAGAAGGGACTTTGCTGTCAGGTCCAAGCCCTCCTGACCTCCCTGAGATTGATCTGCCAGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 90 bp CACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAACCTTCTCCCATaGCTTTGGGAGTACAGTTGGCCTTTGGCCTCCGGGTGGAAGGGC +
Preference number: 1 (lower is better)
Translates to: HKDVVVRGLLANLLP*LWEYSWPLASGWKG
Trigger: GCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGGCATGGGAGAAGGTTGGCGAGAAGACCCCTGACTACCACATCCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 90 bp GGTGGTTCTTATGGGGAGGAAGCCCCACTGGGTGAGTCCCATGGCTaGTTCTTCGCTGACCCAGCAAGCCCTATTCTCTCTGTCCCTCCT +
Preference number: 1 (lower is better)
Translates to: GGSYGEEAPLGESHG*FFADPASPILSVPP
Trigger: AGGAGGGACAGAGAGAATAGGGCTTGCTGGGTCAGCGAAGAAGCAGCCATGGGACTCACCCAGTGGGGCTTCCTCCCCATAAGAACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 90 bp TCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTaGCATTGTCATGGTCAACTTCATCGATGGCCCCTGGCTCGCTGT +
Preference number: 1 (lower is better)
Translates to: SAHQPEELHRWYEAQ*HCHGQLHRWPLARC
Trigger: ACAGCGAGCCAGGGGCCATCGATGAAGTTGACCATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp CAGGGCTGGGACTCAGACTCTGGGCCTTTTGACTCCAAACTTCAGTaGCCTCGAGAGAGAGGAAGCGTGGGAACAGTAGGGAAAAGCCCC +
Preference number: 1 (lower is better)
Translates to: QGWDSDSGPFDSKLQ*PRERGSVGTVGKSP
Trigger: GGGGCTTTTCCCTACTGTTCCCACGCTTCCTCTCTCTCGAGGCCACTGAAGTTTGGAGTCAAAAGGCCCAGAGTCTGAGTCCCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp AAGGCTCCTAAGTGCTCAGGGCTGGGACTCAGACTCTGGGCCTTTTaGCTCCAAACTTCAGTGGCCTCGAGAGAGAGGAAGCGTGGGAAC +
Preference number: 1 (lower is better)
Translates to: KAPKCSGLGLRLWAF*LQTSVASRERKRGN
Trigger: GTTCCCACGCTTCCTCTCTCTCGAGGCCACTGAAGTTTGGAGTCAAAAGGCCCAGAGTCTGAGTCCCAGCCCTGAGCACTTAGGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp CAGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGCTTTGGATATGTaGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAGACCCCAGA +
Preference number: 1 (lower is better)
Translates to: QQSPFSRLPWAALDM*GMFYVAAQRRGDPR
Trigger: TCTGGGGTCTCCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAAGGGACTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp GGACCTGACAGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGCTTTaGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAG +
Preference number: 1 (lower is better)
Translates to: GPDSKVPSLGSPGQL*ICGECSMWLLRGEE
Trigger: CTCCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAAGGGACTTTGCTGTCAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp ACCACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTTGGATCTaGTGCACCCTCTCGGCTGGGTTCTCCAGTTCTCTTCTCTTGCCA +
Preference number: 1 (lower is better)
Translates to: TTMTTRGRVTRICWI*CTLSAGFSSSLLLP
Trigger: TGGCAAGAGAAGAGAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp CTCATGACCACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTTaGATCTGGTGCACCCTCTCGGCTGGGTTCTCCAGTTCTCTTCTC +
Preference number: 1 (lower is better)
Translates to: LMTTMTTRGRVTRIC*IWCTLSAGFSSSLL
Trigger: GAGAAGAGAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp GGCGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTaGGGCTGGATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACA +
Preference number: 1 (lower is better)
Translates to: GGKVFFHLACVKAQI*GWMSGETSAICVCT
Trigger: TGTACACACACAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp CGCTGGTATGAGGCTCAGTGCCATTGTCATGGTCAACTTCATCGATaGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTC +
Preference number: 1 (lower is better)
Translates to: RWYEAQCHCHGQLHR*PLARCVGCHNILPL
Trigger: GAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCATCGATGAAGTTGACCATGACAATGGCACTGAGCCTCATACCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp GGAGAGCGACCCGGAAGGGCTTTACTTGGCCAAGAGGCAAAGGCCTaGCTGTCACACGTGAAGATCATGCACCCATTTCTATCACCACAT +
Preference number: 1 (lower is better)
Translates to: GERPGRALLGQEAKA*LSHVKIMHPFLSPH
Trigger: ATGTGGTGATAGAAATGGGTGCATGATCTTCACGTGTGACAGCCAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCGGGTCGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp AATTTCTTGATGGGTTTCTGGAACGACTGGGCTGGTGGGAGGTTGTaGTGTCCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTG +
Preference number: 1 (lower is better)
Translates to: NFLMGFWNDWAGGRL*CPLSFSMVLGSQDL
Trigger: CAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGGACACCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp ATGAGGCTCAGTGCCATTGTCATGGTCAACTTCATCGATGGCCCCTaGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCAT +
Preference number: 1 (lower is better)
Translates to: MRLSAIVMVNFIDGP*LAVWAVTIFFPSSH
Trigger: ATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCATCGATGAAGTTGACCATGACAATGGCACTGAGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 90 bp AGGAAGTTTCCAGTGACGATATGCGGGAGAAGCCATGTGGTATTTTaGCTCCATGTTAGGGAATGCTGTGGTTGGGGCTGCTGGAGCTCC +
Preference number: 1 (lower is better)
Translates to: RKFPVTICGRSHVVF*LHVRECCGWGCWSS
Trigger: GGAGCTCCAGCAGCCCCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCATATCGTCACTGGAAACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 90 bp TCGCAGGAGAGGGTAAGTAACAGCGGCCCACAGGGCACACAGATTTaGCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGAT +
Preference number: 1 (lower is better)
Translates to: SQERVSNSGPQGTQI*PCAIIQKQLISGSD
Trigger: ATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTGTTACTTACCCTCTCCTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 90 bp AAAGAAGAAGGATCATCTCGGAGGGGGACCCAAAGCTCTGACTCATaGATTCTGGGGGCCACTGTGAACCTTTACCCTGAGAAGTGGGAG +
Preference number: 1 (lower is better)
Translates to: KEEGSSRRGTQSSDS*ILGATVNLYPEKWE
Trigger: CTCCCACTTCTCAGGGTAAAGGTTCACAGTGGCCCCCAGAATGCATGAGTCAGAGCTTTGGGTCCCCCTCCGAGATGATCCTTCTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp GAGGTAAAATGGAATCGAAGGAGAGCGACCCGGAAGGGCTTTACTTaGCCAAGAGGCAAAGGCCTGGCTGTCACACGTGAAGATCATGCA +
Preference number: 1 (lower is better)
Translates to: EVKWNRRRATRKGFT*PRGKGLAVTREDHA
Trigger: TGCATGATCTTCACGTGTGACAGCCAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCGGGTCGCTCTCCTTCGATTCCATTTTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp TTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTaGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAA +
Preference number: 1 (lower is better)
Translates to: FPLGLRQGSDLGLDE*GDVCHLCVYIPKCE
Trigger: TTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp CACATCACGACCAGGTCACGAGAAGTCCTCCACATTCGTGCCTCCTaGATGACAGAGAAATATACCCAACAAGGCACTCCAAGGGACTCC +
Preference number: 1 (lower is better)
Translates to: HITTRSREVLHIRAS*MTEKYTQQGTPRDS
Trigger: GGAGTCCCTTGGAGTGCCTTGTTGGGTATATTTCTCTGTCATTCAGGAGGCACGAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTaGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACTTGACA +
Preference number: 1 (lower is better)
Translates to: PLSFSMVLGSQDLAY*PLRVTRLVSTEHLT
Trigger: TGTCAAGTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 90 bp GGAGTCAGAAAGAGAAAGCCAATGTTCAGTGAACGTCGATGGGACTaGGTGCTGTGGAGGGTGAGTGAGACATGCATAGTGCCAGATGAG +
Preference number: 1 (lower is better)
Translates to: GVRKRKPMFSERRWD*VLWRVSETCIVPDE
Trigger: CTCATCTGGCACTATGCATGTCTCACTCACCCTCCACAGCACTCAGTCCCATCGACGTTCACTGAACATTGGCTTTCTCTTTCTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp TCACGACCAGGTCACGAGAAGTCCTCCACATTCGTGCCTCCTGAATaGCAGAGAAATATACCCAACAAGGCACTCCAAGGGACTCCAACA +
Preference number: 1 (lower is better)
Translates to: SRPGHEKSSTFVPPE*QRNIPNKALQGTPT
Trigger: TGTTGGAGTCCCTTGGAGTGCCTTGTTGGGTATATTTCTCTGTCATTCAGGAGGCACGAATGTGGAGGACTTCTCGTGACCTGGTCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp CATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACATGCACTaGATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCG +
Preference number: 1 (lower is better)
Translates to: HYPSPRVFPLAVDMH*MPHHDQVTRSPPHS
Trigger: CGAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 90 bp AAGACTCCAAAGTCTAATTCCCAAGCTCGCAATTCCCTCCGATTGTaGACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCG +
Preference number: 1 (lower is better)
Translates to: KTPKSNSQARNSLRL*TLSGVQKALRGEKS
Trigger: CGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGAGGGAATTGCGAGCTTGGGAATTAGACTTTGGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp GATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTaGTCAGAAGAGGAGGTAAAATGGAATCGAAGGAGAGCGACCCGG +
Preference number: 1 (lower is better)
Translates to: DLPVCHYPETAHLWK*SEEEVKWNRRRATR
Trigger: CCGGGTCGCTCTCCTTCGATTCCATTTTACCTCCTCTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp TACCCTATTTTATGGAGCAGAACAGTCAGGCTCAATGAGGTGGAGTaGCAAACCCTAAGTCAGAAGGCTCCTAAGTGCTCAGGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: YPILWSRTVRLNEVE*QTLSQKAPKCSGLG
Trigger: TCCCAGCCCTGAGCACTTAGGAGCCTTCTGACTTAGGGTTTGTCACTCCACCTCATTGAGCCTGACTGTTCTGCTCCATAAAATAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp ATTCATGCATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTaGCCTTTGAGGCCTGCTGGATTCCATTCATACCGGGTGCTGTCA +
Preference number: 1 (lower is better)
Translates to: IHAWQRPGLMVLCLI*PLRPAGFHSYRVLS
Trigger: TGACAGCACCCGGTATGAATGGAATCCAGCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCATGCATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 90 bp AAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTaGTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGAC +
Preference number: 1 (lower is better)
Translates to: KTWTHGSLPDLTFEA*WIPFIPGAVKSKED
Trigger: GTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp ACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCTaGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGA +
Preference number: 1 (lower is better)
Translates to: TWTHGSLPDLTFEAC*IPFIPGAVKSKEDR
Trigger: TCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp CCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAAGACCTaGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCTGG +
Preference number: 1 (lower is better)
Translates to: PAIWHSLADSCMAKT*THGSLPDLTFEACW
Trigger: CCAGCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp ATACTCTTTAAATTTCTTGATGGGTTTCTGGAACGACTGGGCTGGTaGGAGGTTGTGGTGTCCTCTCTCCTTTTCCATGGTCCTAGGCTC +
Preference number: 1 (lower is better)
Translates to: ILFKFLDGFLERLGW*EVVVSSLLFHGPRL
Trigger: GAGCCTAGGACCATGGAAAAGGAGAGAGGACACCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAAATTTAAAGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp CACATACTCTTTAAATTTCTTGATGGGTTTCTGGAACGACTGGGCTaGTGGGAGGTTGTGGTGTCCTCTCTCCTTTTCCATGGTCCTAGG +
Preference number: 1 (lower is better)
Translates to: HILFKFLDGFLERLG*WEVVVSSLLFHGPR
Trigger: CCTAGGACCATGGAAAAGGAGAGAGGACACCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAAATTTAAAGAGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 90 bp GAAGGGCTTTACTTGGCCAAGAGGCAAAGGCCTGGCTGTCACACGTaGAGATCATGCACCCATTTCTATCACCACATTTTCATCTACACT +
Preference number: 1 (lower is better)
Translates to: EGLYLAKRQRPGCHT*RSCTHFYHHIFIYT
Trigger: AGTGTAGATGAAAATGTGGTGATAGAAATGGGTGCATGATCTTCACGTGTGACAGCCAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp ATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTTCTCAGGAGAGTaGGGCATTTGCACTAGTGTGGAACCATCTGGATGTGTGAAAAGT +
Preference number: 1 (lower is better)
Translates to: MVVSQPLFFLGFSGE*GICTSVEPSGCVKS
Trigger: ACTTTTCACACATCCAGATGGTTCCACACTAGTGCAAATGCCTCACTCTCCTGAGAAACCCAGAAAGAAGAGTGGCTGGCTCACAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 90 bp CATTCGCAGTTACTATGGGCCTTTAAGTTCTCCCAGAAAAGTCCCTaGAAATCCCACCAAATAACTCGGTGGGAGATGTTTGGTGGCATG +
Preference number: 1 (lower is better)
Translates to: HSQLLWAFKFSQKSP*KSHQITRWEMFGGM
Trigger: CATGCCACCAAACATCTCCCACCGAGTTATTTGGTGGGATTTGCAGGGACTTTTCTGGGAGAACTTAAAGGCCCATAGTAACTGCGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp GGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCTaGGAGTATCTTGAGGGTAGAAATCAGAAGTCTTGTGTCCTGGCT +
Preference number: 1 (lower is better)
Translates to: GRLLYFAWEATGFRI*EYLEGRNQKSCVLA
Trigger: AGCCAGGACACAAGACTTCTGATTTCTACCCTCAAGATACTCCCAGATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp ATAGAAACCTTTCATCCCTTGGGAATCCATCTCTCTCCTGACCCCTaGCCTGGTGACTTCAGAGAAAAGACTCCAAAGTCTAATTCCCAA +
Preference number: 1 (lower is better)
Translates to: IETFHPLGIHLSPDP*PGDFREKTPKSNSQ
Trigger: TTGGGAATTAGACTTTGGAGTCTTTTCTCTGAAGTCACCAGGCCAGGGGTCAGGAGAGAGATGGATTCCCAAGGGATGAAAGGTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp GGATCTGGGAGTATCTTGAGGGTAGAAATCAGAAGTCTTGTGTCCTaGCTGGACAGTATAGCATCCAGCATGCAAACACATGACTTTAAG +
Preference number: 1 (lower is better)
Translates to: GSGSILRVEIRSLVS*LDSIASSMQTHDFK
Trigger: CTTAAAGTCATGTGTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCTACCCTCAAGATACTCCCAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp TGTTGCTTTTCATCTGGCAGTTGTGGCAGATTGCTATATTTTGCCTaGGAGGCTACTGGATTTAGGATCTGGGAGTATCTTGAGGGTAGA +
Preference number: 1 (lower is better)
Translates to: CCFSSGSCGRLLYFA*EATGFRIWEYLEGR
Trigger: TCTACCCTCAAGATACTCCCAGATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCCAGATGAAAAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp CACATATACGTATGTAGAGAGAATGTCGAGAGAGGAAGTTTCCAGTaGCGATATGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTA +
Preference number: 1 (lower is better)
Translates to: HIYVCRENVERGSFQ*RYAGEAMWYFASML
Trigger: TAACATGGAGGCAAAATACCACATGGCTTCTCCCGCATATCGTCACTGGAAACTTCCTCTCTCGACATTCTCTCTACATACGTATATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp TATGGCTCAATTTCCCTGTGTCTCTTCCCACTCCGATTTCTTCATTaGATAGAAACCTTTCATCCCTTGGGAATCCATCTCTCTCCTGAC +
Preference number: 1 (lower is better)
Translates to: YGSISLCLFPLRFLH*IETFHPLGIHLSPD
Trigger: GTCAGGAGAGAGATGGATTCCCAAGGGATGAAAGGTTTCTATTCAATGAAGAAATCGGAGTGGGAAGAGACACAGGGAAATTGAGCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp AATGAATGCTTCCATACTGCCGTTAAAGAGTTTATGGCTATACACTaGGAGAGGCCTAGGTCTCCTCATTTTCTGTGGTTTAGGGGGAAG +
Preference number: 1 (lower is better)
Translates to: NECFHTAVKEFMAIH*ERPRSPHFLWFRGK
Trigger: CTTCCCCCTAAACCACAGAAAATGAGGAGACCTAGGCCTCTCTCAGTGTATAGCCATAAACTCTTTAACGGCAGTATGGAAGCATTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp GTTTTTCTGCAGGTTAGTGGTATATTGCTTCATTCGCAGTTACTATaGGCCTTTAAGTTCTCCCAGAAAAGTCCCTGCAAATCCCACCAA +
Preference number: 1 (lower is better)
Translates to: VFLQVSGILLHSQLL*AFKFSQKSPCKSHQ
Trigger: TTGGTGGGATTTGCAGGGACTTTTCTGGGAGAACTTAAAGGCCCATAGTAACTGCGAATGAAGCAATATACCACTAACCTGCAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp CACAGCTTGTTCTCAATTTTATCCAAAAAGCTCTTTAGTGGCAGCTaGGCCACAAGGCCCAGGAAACTAGACCAGGAATTAATTGTCTTT +
Preference number: 1 (lower is better)
Translates to: HSLFSILSKKLFSGS*ATRPRKLDQELIVF
Trigger: AAAGACAATTAATTCCTGGTCTAGTTTCCTGGGCCTTGTGGCTCAGCTGCCACTAAAGAGCTTTTTGGATAAAATTGAGAACAAGCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 90 bp TTCTTCCTCTTAATGAATGCTTCCATACTGCCGTTAAAGAGTTTATaGCTATACACTGAGAGAGGCCTAGGTCTCCTCATTTTCTGTGGT +
Preference number: 1 (lower is better)
Translates to: FFLLMNASILPLKSL*LYTERGLGLLIFCG
Trigger: ACCACAGAAAATGAGGAGACCTAGGCCTCTCTCAGTGTATAGCCATAAACTCTTTAACGGCAGTATGGAAGCATTCATTAAGAGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 90 bp ACAGATACACAAACAACTAAATTGTTCCTGCAATTTGGCATTCATTaGCTGATTCATGCATGGCAAAGACCTGGACTCATGGTTCTCTGC +
Preference number: 1 (lower is better)
Translates to: TDTQTTKLFLQFGIH*LIHAWQRPGLMVLC
Trigger: GCAGAGAACCATGAGTCCAGGTCTTTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGTTTGTGTATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 90 bp CTGAAATGCCATTGGGAGGTTTCAAAAAGAAGGGCTGGAGGGCTCTaGTCTAAGACTTACCTTACTAATGATAATCACAAACGCATTGTA +
Preference number: 1 (lower is better)
Translates to: LKCHWEVSKRRAGGL*SKTYLTNDNHKRIV
Trigger: TACAATGCGTTTGTGATTATCATTAGTAAGGTAAGTCTTAGATCAGAGCCCTCCAGCCCTTCTTTTTGAAACCTCCCAATGGCATTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 90 bp GAACAAGTAGGTAAACACCACTTCCCCTTGTACAATTGGTTATATTaGAGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGT +
Preference number: 1 (lower is better)
Translates to: EQVGKHHFPLYNWLY*RLLTRLLHFPHTHC
Trigger: ACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCTTCAATATAACCAATTGTACAAGGGGAAGTGGTGTTTACCTACTTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCCACCAAGGCCACCCTaGGCCGTGGTGAGCCACAGC +
Preference number: 2 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSPPRPP*AVVSHS
Trigger: GCTGTGGCTCACCACGGCCCAGGGTGGCCTTGGTGG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTCACCCTGGGCCGTGGTaGGCCACAGCGGGCCACGGC +
Preference number: 2 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTHPGPW*ATAGHG
Trigger: GCCGTGGCCCGCTGTGGCTCACCACGGCCCAGGGTG...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCTCCCAGACGGACCTCTaGCCTCCAAGGCCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSSQTDL*PPRPGS
Trigger: TGACCCTGGCCTTGGAGGGCAGAGGTCCGTCTGGGA...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTTCCCATGGCTGGACGTaGGCTGCAGCCAGCGCCCGG +
Preference number: 2 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTSHGWT*AAASAR
Trigger: CCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGA...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCCTAAGTGCTCAGGGCTaGGACTCAGACTCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSLSAQG*DSDSGP
Trigger: AGGCCCAGAGTCTGAGTCCCAGCCCTGAGCACTTAG...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 90 bp GACAGCAGGACACTGGCAGATCAATCTCAGGGAGGTCAGGAGGGCTaGGACCTGACAGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: DSRTLADQSQGGQEG*DLTAKSLLSAPLGS
Trigger: GCTGCCCAGGGGAGCCGAGAGAAGGGACTTTGCTGTCAGGTCCAAGCCCTCCTGACCTCCCTGAGATTGATCTGCCAGTGTCCTGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCTGGCTGGACGTGAGCTaGAGCCAGCGCCCGGGCCTC +
Preference number: 2 (lower is better)
Translates to: GHALNATSRPGHEKSSTFWLDVS*SQRPGL
Trigger: GAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCA...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGTGGCTGGACGTGAGCTaGAGCCAGCGCCCGGGCCTC +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERWLDVS*SQRPGL
Trigger: GAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCA...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTCCACCAAGGCCACCCTaGGCCGTGGTGAGCCACAGC +
Preference number: 2 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTPPRPP*AVVSHS
Trigger: GCTGTGGCTCACCACGGCCCAGGGTGGCCTTGGTGG...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCAGGGGCAGACTGTTCTaGAAGGCCACGACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSRGRLF*KATTSG
Trigger: TCCAGAAGTCGTGGCCTTCCAGAACAGTCTGCCCCT...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 90 bp GGATGTGGTAGTCAGGGGTCTTCTCGCCAACCTTCTCCCATGCCTTaGGGAGTACAGTTGGCCTTTGGCCTCCGGGTGGAAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: GCGSQGSSRQPSPMP*GVQLAFGLRVEGQG
Trigger: ACCCTGCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGGCATGGGAGAAGGTTGGCGAGAAGACCCCTGACTACCACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCACCCTGGGCCGTGGTaGGCCACAGCGGGCCACGGC +
Preference number: 2 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIHPGPW*ATAGHG
Trigger: GCCGTGGCCCGCTGTGGCTCACCACGGCCCAGGGTG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCAGACTCTGGGCCTTTTaGCTCCAAACTTCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSRLWAF*LQTSVA
Trigger: GGCCACTGAAGTTTGGAGTCAAAAGGCCCAGAGTCT...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTCCTTTGGCCTCCGGGTaGAAGGGCAGGGTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTPLASG*KGRVSG
Trigger: CCCAGAGACCCTGCCCTTCCACCCGGAGGCCAAAGG...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGGTAGGGAAAAGCCCCTaGGTCTCGCAGGAGAGGGTA +
Preference number: 2 (lower is better)
Translates to: FHLACVKAQIWGWMSGETVGKSP*VSQERV
Trigger: TACCCTCTCCTGCGAGACCCAGGGGCTTTTCCCTAC...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCTGGGGCTGGATGAGTaGGGAGACGTCTGCCATCTG +
Preference number: 2 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKLGLDE*GDVCHL
Trigger: CAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCTGGAACGACTGGGCTaGTGGGAGGTTGTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMLERLG*WEVVVS
Trigger: GGACACCACAACCTCCCACCAGCCCAGTCGTTCCAG...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGAAAGTGCCAAGGACTaGCCCTCCCTGGCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: GTRAWAETLARIYFRLRKESAKD*PSLAPV
Trigger: GACTGGGGCCAGGGAGGGGCAGTCCTTGGCACTTTC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGGCCCCAGTCTGAACTaGGCGCTCACGGCTCATGCG +
Preference number: 2 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDGPSLN*ALTAHA
Trigger: CGCATGAGCCGTGAGCGCCCAGTTCAGACTGGGGCC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTAGGACTGCCCCTCCCTaGCCCCAGTCTGAACTGGGC +
Preference number: 2 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSRTAPP*PQSELG
Trigger: GCCCAGTTCAGACTGGGGCCAGGGAGGGGCAGTCCT...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGGGTCAACTTCATCGATaGCCCCTGGCTCGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRGQLHR*PLARCV
Trigger: CACACAGCGAGCCAGGGGCCATCGATGAAGTTGACC...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGTCCCATGGCTGGACGTaGGCTGCAGCCAGCGCCCGG +
Preference number: 2 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRSHGWT*AAASAR
Trigger: CCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGA...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGAGAGGAAGTTTCCAGTaGCGATATGCGGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: FHLACVKAQIWGWMSGETRGSFQ*RYAGEA
Trigger: GGCTTCTCCCGCATATCGTCACTGGAAACTTCCTCT...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCTCCCTGGCCCCAGTCTaGACTGGGCGCTCACGGCTC +
Preference number: 2 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLSLAPV*TGRSRL
Trigger: GAGCCGTGAGCGCCCAGTTCAGACTGGGGCCAGGGA...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCAAAGCCAATGTTCAGTaGACGTCGATGGGACTGAGT +
Preference number: 2 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSKANVQ*TSMGLS
Trigger: ACTCAGTCCCATCGACGTTCACTGAACATTGGCTTT...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGCCACGCGGGGAAGGGTaGCGAGGATTTGTTGGATCT +
Preference number: 2 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMPRGEG*RGFVGS
Trigger: AGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGG...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTCCCAGACGGACCTCTaGCCTCCAAGGCCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDSQTDL*PPRPGS
Trigger: TGACCCTGGCCTTGGAGGGCAGAGGTCCGTCTGGGA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAAAGTGCCAAGGACTaGCCCTCCCTGGCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDESAKD*PSLAPV
Trigger: GACTGGGGCCAGGGAGGGGCAGTCCTTGGCACTTTC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGCAAGGCCAGGGTCACTaGGAAGCACGTGGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: GTRAWAETLARIYFRLRKQGQGH*EARGSH
Trigger: GTGGCTTCCACGTGCTTCCCAGTGACCCTGGCCTTG...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGGACTCCAAACTTCAGTaGCCTCGAGAGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: FHLACVKAQIWGWMSGETDSKLQ*PRERGS
Trigger: GCTTCCTCTCTCTCGAGGCCACTGAAGTTTGGAGTC...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGTGCTCCCTTCCACTGTaGGGTGTCAAGTCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKCSLPL*GVKSSP
Trigger: AGGACTGGACTTGACACCCCACAGTGGAAGGGAGCA...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGTTCTCTCGGCTCCCCTaGGCAGCTTTGGATATGTGG +
Preference number: 2 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKFSRLP*AALDMW
Trigger: CCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAA...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTTTCTTGATGGGTTTCTaGAACGACTGGGCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGFLMGF*NDWAGG
Trigger: CCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAA...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGGTGCACCCTCTCGGCTaGGTTCTCCAGTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRVHPLG*VLQFSS
Trigger: AGAAGAGAACTGGAGAACCCAGCCGAGAGGGTGCAC...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGCTAGCTCCCGGGGGCTaGGGAAGATGGCTTCATGAT +
Preference number: 2 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMLAPGG*GRWLHD
Trigger: ATCATGAAGCCATCTTCCCCAGCCCCCGGGAGCTAG...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCACCTCTGGTCGTCTGTTaGCACGCGAGAGGTCCGTGG +
Preference number: 2 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAPLVVC*HARGPW
Trigger: CCACGGACCTCTCGCGTGTCAACAGACGACCAGAGG...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTGCCCCACCCTTCCTTaGGGGGCAGACTGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRCPTLP*GADCSG
Trigger: TCCAGAACAGTCTGCCCCTCAAGGAAGGGTGGGGCA...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCCACATTCGTGCCTCCTaGATGACAGAGAAATATACC +
Preference number: 2 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSHIRAS*MTEKYT
Trigger: GGTATATTTCTCTGTCATTCAGGAGGCACGAATGTG...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGATTTGTTGGATCTGGTaGACCCTCTCGGCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMICWIW*TLSAGF
Trigger: GAACCCAGCCGAGAGGGTGCACCAGATCCAACAAAT...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGGACTTCATTGATGTGTaGCTGGCAGGACACAGGGTC +
Preference number: 2 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMDFIDV*LAGHRV
Trigger: GACCCTGTGTCCTGCCAGGCACACATCAATGAAGTC...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGAGTACAGTTGGCCTTTaGCCTCCGGGTGGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: GTRAWAETLARIYFRLRKSTVGL*PPGGRA
Trigger: TGCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACT...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCTTTGGGAGTACAGTTaGCCTTTGGCCTCCGGGTGG +
Preference number: 2 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPLWEYS*PLASGW
Trigger: CCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTAGGACTGCCCCTCCCTaGCCCCAGTCTGAACTGGGC +
Preference number: 2 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGRTAPP*PQSELG
Trigger: GCCCAGTTCAGACTGGGGCCAGGGAGGGGCAGTCCT...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCCTGGGGCTGGATGAGTaGGGAGACGTCTGCCATCTG +
Preference number: 2 (lower is better)
Translates to: GHALNATSRPGHEKSSTFLGLDE*GDVCHL
Trigger: CAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAG...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGAGGATTTGTTGGATCTaGTGCACCCTCTCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMRICWI*CTLSAG
Trigger: CCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCT...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 90 bp TCTCATGACCACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTaGGATCTGGTGCACCCTCTCGGCTGGGTTCTCCAGTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: SHDHNDHAGKGDEDL*DLVHPLGWVLQFSS
Trigger: AGAAGAGAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 90 bp GTATCTCATGACCACAATGACCACGCGGGGAAGGGTGACGAGGATTaGTTGGATCTGGTGCACCCTCTCGGCTGGGTTCTCCAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: VSHDHNDHAGKGDED*LDLVHPLGWVLQFS
Trigger: AGAGAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGAGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGGTGGGGATTTCCTATaGAGGGTTCCCCACCTCTGG +
Preference number: 2 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRGGDFL*RVPHLW
Trigger: CCAGAGGTGGGGAACCCTTCATAGGAAATCCCCACC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGGCTCATGCGTTTCATaGAAGACGGCACCAGCCACA +
Preference number: 2 (lower is better)
Translates to: GTRAWAETLARIYFRLRKGSCVS*KTAPAT
Trigger: TGTGGCTGGTGCCGTCTTGCATGAAACGCATGAGCC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAATTCCCTCCGATTGTaGACTCTGTCCGGGGTTCAA +
Preference number: 2 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGNSLRL*TLSGVQ
Trigger: TTGAACCCCGGACAGAGTGCACAATCGGAGGGAATT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGAATTCCCTCCGATTGTaGACTCTGTCCGGGGTTCAA +
Preference number: 2 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKNSLRL*TLSGVQ
Trigger: TTGAACCCCGGACAGAGTGCACAATCGGAGGGAATT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGGCAGATCTCTGAACTaGTGGTTCCAGCCGATAGCC +
Preference number: 2 (lower is better)
Translates to: GTRAWAETLARIYFRLRKGRSLN*WFQPIA
Trigger: GGCTATCGGCTGGAACCAGCAGTTCAGAGATCTGCC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGAATGTTCTATGTGGCTaGTCAGAGGAGAGGAGACCC +
Preference number: 2 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKNVLCG*SEERRP
Trigger: GGGTCTCCTCTCCTCTGAGCAGCCACATAGAACATT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGCCTTCGCCCAGGGTCTaGTTGAGTAAATCGTGCTTG +
Preference number: 2 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMPSPRV*LSKSCL
Trigger: CAAGCACGATTTACTCAAGCAGACCCTGGGCGAAGG...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCGGTGGTGCCGCATTCTaGTCTTTCCCCTTCGCCCAG +
Preference number: 2 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACGGAAF*SFPFAQ
Trigger: CTGGGCGAAGGGGAAAGAGCAGAATGCGGCACCACC...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCCACGCGAGAGGTCCGTaGGATTCCCATGGCTGGACG +
Preference number: 2 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLHARGP*DSHGWT
Trigger: CGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTG...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCAGGGGCAGACTGTTCTaGAAGGCCACGACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPRGRLF*KATTSG
Trigger: TCCAGAAGTCGTGGCCTTCCAGAACAGTCTGCCCCT...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATAGTACAGTTGGCCTTTaGCCTCCGGGTGGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDSTVGL*PPGGRA
Trigger: TGCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACT...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAACTTTGGGAGTACAGTTaGCCTTTGGCCTCCGGGTGG +
Preference number: 2 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQLWEYS*PLASGW
Trigger: CCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAG...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCAATACTGTGCTACGATaGGGCTTAGGTTCTCACTAT +
Preference number: 2 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSNTVLR*GLGSHY
Trigger: ATAGTGAGAACCTAAGCCCCATCGTAGCACAGTATT...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCGGAAGGGCTTTACTTaGCCAAGAGGCAAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPRKGFT*PRGKGL
Trigger: CAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGCTAGGTCCCTCCCTTTaGGTGTATTTACCTTTTCGC +
Preference number: 2 (lower is better)
Translates to: FHLACVKAQIWGWMSGETLGPSL*VYLPFR
Trigger: GCGAAAAGGTAAATACACCCAAAGGGAGGGACCTAG...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGTCCCCTGGGCAGCTTTaGATATGTGGGGAATGTTCT +
Preference number: 2 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKSPGQL*ICGECS
Trigger: AGAACATTCCCCACATATCCAAAGCTGCCCAGGGGA...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTCTCTTTAGTGGCAGCTaGGCCACAAGGCCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRLFSGS*ATRPRK
Trigger: TTTCCTGGGCCTTGTGGCTCAGCTGCCACTAAAGAG...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGAGCCATGTGGTATTTTaGCTCCATGTTAGGGAATGC +
Preference number: 2 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSHVVF*LHVREC
Trigger: GCATTCCCTAACATGGAGGCAAAATACCACATGGCT...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTTTCCAGTGACGATATaGGGGAGAAGCCATGTGGTA +
Preference number: 2 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGFPVTI*GRSHVV
Trigger: TACCACATGGCTTCTCCCGCATATCGTCACTGGAAA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAGTCCTCCACATTCGTaGCTCCTGAATGACAGAGAA +
Preference number: 2 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGSPPHS*LLNDRE
Trigger: TTCTCTGTCATTCAGGAGGCACGAATGTGGAGGACT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCCAGGACACAGGGTCCTaGCCATCAGGGATGTGCATG +
Preference number: 2 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACQDTGS*PSGMCM
Trigger: CATGCACATCCCTGATGGGCAGGACCCTGTGTCCTG...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCACGCGAGAGGTCCGTaGGATTCCCATGGCTGGACG +
Preference number: 2 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIHARGP*DSHGWT
Trigger: CGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGGGCCCCAGTCTGAACTaGGCGCTCACGGCTCATGCG +
Preference number: 2 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKGPSLN*ALTAHA
Trigger: CGCATGAGCCGTGAGCGCCCAGTTCAGACTGGGGCC...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCAAGAGGCAAAGGCCTaGCTGTCACACGTGAAGATC +
Preference number: 2 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPQEAKA*LSHVKI
Trigger: GATCTTCACGTGTGACAGCCAGGCCTTTGCCTCTTG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGACTCCAAACTTCAGTaGCCTCGAGAGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GTRAWAETLARIYFRLRKDSKLQ*PRERGS
Trigger: GCTTCCTCTCTCTCGAGGCCACTGAAGTTTGGAGTC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 90 bp CTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGTCCCTCCCTTaGGGTGTATTTACCTTTTCGCGGGGGACCAGAGGAGAGGGCACC +
Preference number: 2 (lower is better)
Translates to: LLTYLGASDLTRSLP*GVFTFSRGTRGEGT
Trigger: GGTGCCCTCTCCTCTGGTCCCCCGCGAAAAGGTAAATACACCCAAAGGGAGGGACCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTTTTTTGTTCCTCTCCTaGTGCTCCCTTCCACTGTGG +
Preference number: 2 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTFLFLS*CSLPLW
Trigger: CCACAGTGGAAGGGAGCATCAGGAGAGGAACAAAAA...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGAGCCATGTGGTATTTTaGCTCCATGTTAGGGAATGC +
Preference number: 2 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKSHVVF*LHVREC
Trigger: GCATTCCCTAACATGGAGGCAAAATACCACATGGCT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCAGGGCACACAGATTTaGCCGTGTGCCATTATCCAG +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERQGTQI*PCAIIQ
Trigger: CTGGATAATGGCACACGGGCAAATCTGTGTGCCCTG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCACCAAATAACTCGGTaGGAGATGTTTGGTGGCATG +
Preference number: 2 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAHQITR*EMFGGM
Trigger: CATGCCACCAAACATCTCCCACCGAGTTATTTGGTG...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGGACTTCTGGAGACAGTaGGAGTCTGTTTTTGTTTGT +
Preference number: 2 (lower is better)
Translates to: FHLACVKAQIWGWMSGETDFWRQ*ESVFVC
Trigger: ACAAACAAAAACAGACTCCCACTGTCTCCAGAAGTC...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTTGTGCTCCAAGCAGATaGCCTTTCATATCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTCAPSR*PFISRS
Trigger: GCTCCTGGATATGAAAGGCCATCTGCTTGGAGCACA...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTAAGATCCCCTGCTGCTaGAGTCCATATAAATTGATG +
Preference number: 2 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGKIPCC*SPYKLM
Trigger: CATCAATTTATATGGACTCCAGCAGCAGGGGATCTT...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 90 bp TCCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATaGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACTTGAC +
Preference number: 2 (lower is better)
Translates to: SSLLFHGPRLPGPGL*AIKSHSTCIHRALD
Trigger: GTCAAGTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 90 bp TTAAATTTCTTGATGGGTTTCTGGAACGACTGGGCTGGTGGGAGGTaGTGGTGTCCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LNFLMGFWNDWAGGR*WCPLSFSMVLGSQD
Trigger: GTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGGACACCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAAATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTGCCCCACCCTTCCTTaGGGGGCAGACTGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANCPTLP*GADCSG
Trigger: TCCAGAACAGTCTGCCCCTCAAGGAAGGGTGGGGCA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTAGGGCTGGAGGGCTCTaGTCTAAGACTTACCTTACT +
Preference number: 2 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRRAGGL*SKTYLT
Trigger: AGTAAGGTAAGTCTTAGATCAGAGCCCTCCAGCCCT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCAGGGCTGGAGGGCTCTaGTCTAAGACTTACCTTACT +
Preference number: 2 (lower is better)
Translates to: GHALNATSRPGHEKSSTFRAGGL*SKTYLT
Trigger: AGTAAGGTAAGTCTTAGATCAGAGCCCTCCAGCCCT...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGACGCCCAGGGTCTGCTTaGGTAAATCGTGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: YTQDTLRAFREHETGSPRRPGSA*VNRAWP
Trigger: AGGCCAAGCACGATTTACTCAAGCAGACCCTGGGCG...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGCAAGGCCAGGGTCACTaGGAAGCACGTGGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKQGQGH*EARGSH
Trigger: GTGGCTTCCACGTGCTTCCCAGTGACCCTGGCCTTG...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGAAGGCCACGACTTCTaGAGACAGTGGGAGTCTGTT +
Preference number: 2 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAEGHDF*RQWESV
Trigger: AACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACTGGGGTGGACGGGGGTaGGGATTTCCTATGAAGGGT +
Preference number: 2 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDWGGRG*GFPMKG
Trigger: ACCCTTCATAGGAAATCCCCACCCCCGTCCACCCCA...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGTAGGGAAAAGCCCCTaGGTCTCGCAGGAGAGGGTA +
Preference number: 2 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIVGKSP*VSQERV
Trigger: TACCCTCTCCTGCGAGACCCAGGGGCTTTTCCCTAC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGAGATCTCTGAACTGCTaGTTCCAGCCGATAGCCAAA +
Preference number: 2 (lower is better)
Translates to: GTRAWAETLARIYFRLRKRSLNC*FQPIAK
Trigger: TTTGGCTATCGGCTGGAACCAGCAGTTCAGAGATCT...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGGGACAGCAGGACACTaGCAGATCAATCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGGTAGH*QINLRE
Trigger: CTCCCTGAGATTGATCTGCCAGTGTCCTGCTGTCCC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACAGGTTTCTGGAACGACTaGGCTGGTGGGAGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTGFWND*AGGRLW
Trigger: CCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACC...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTCCTGGCTGTCACACGTaGAGATCATGCACCCATTTC +
Preference number: 2 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGPGCHT*RSCTHF
Trigger: GAAATGGGTGCATGATCTTCACGTGTGACAGCCAGG...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAAAGGCGCTTCGAGGTaGGAAATCGTTAGCACTGAA +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERKGASR*EIVSTE
Trigger: TTCAGTGCTAACGATTTCTCACCTCGAAGCGCCTTT...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCCGGGGAAGTTGACATaGAATGTCAGCATTAGCTCT +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERPGKLT*NVSISS
Trigger: AGAGCTAATGCTGACATTTCATGTCAACTTCCCCGG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCACCAGCGACTGAATTaGTATCTCGTTCATTTTGAT +
Preference number: 2 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRHQRLN*YLVHFD
Trigger: ATCAAAATGAACGAGATATCAATTCAGTCGCTGGTG...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCGAGAAACACCCCAAATaGAACTGGGTATGGGGCAAC +
Preference number: 2 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACEKHPK*NWVWGN
Trigger: GTTGCCCCATACCCAGTTTCATTTGGGGTGTTTCTC...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAAGCCTTCAGGGAACATaGAACTGGCTCTCCCAGACT +
Preference number: 2 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQISLQGT*NWLSQT
Trigger: AGTCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCT...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAATTTCCAGTGACGATATaGGGGAGAAGCCATGTGGTA +
Preference number: 2 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQFPVTI*GRSHVV
Trigger: TACCACATGGCTTCTCCCGCATATCGTCACTGGAAA...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCAGGCTCATGCGTTTCATaGAAGACGGCACCAGCCACA +
Preference number: 2 (lower is better)
Translates to: MSGETSAICVCTSLNVNSGSCVS*KTAPAT
Trigger: TGTGGCTGGTGCCGTCTTGCATGAAACGCATGAGCC...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACGGCGCTCACGGCTCATaGGTTTCATGCAAGACGGCA +
Preference number: 2 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANGAHGS*VSCKTA
Trigger: TGCCGTCTTGCATGAAACGCATGAGCCGTGAGCGCC...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGGCAGTTGTGGCAGATTaGTATATTTTGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERAVVAD*YILPGR
Trigger: CCTCCCAGGCAAAATATAGCAATCTGCCACAACTGC...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCGAAGGCCACGACTTCTaGAGACAGTGGGAGTCTGTT +
Preference number: 2 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLEGHDF*RQWESV
Trigger: AACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTC...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACTGCTCCCTTCCACTGTaGGGTGTCAAGTCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDCSLPL*GVKSSP
Trigger: AGGACTGGACTTGACACCCCACAGTGGAAGGGAGCA...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAGATCTCTGAACTGCTaGTTCCAGCCGATAGCCAAA +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERRSLNC*FQPIAK
Trigger: TTTGGCTATCGGCTGGAACCAGCAGTTCAGAGATCT...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGCTGAATCCTGGTTCCTaGTTCGAGCATTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLLNPGS*FEHFFF
Trigger: GAAGAAGAAATGCTCGAACCAGGAACCAGGATTCAG...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTAGAGGAAGTTTCCAGTaGCGATATGCGGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFRGSFQ*RYAGEA
Trigger: GGCTTCTCCCGCATATCGTCACTGGAAACTTCCTCT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCCTGGCTGTCACACGTaGAGATCATGCACCCATTTC +
Preference number: 2 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIPGCHT*RSCTHF
Trigger: GAAATGGGTGCATGATCTTCACGTGTGACAGCCAGG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACAAGGGAGGTCAAGTTTaGCACTGGCCTCTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANKGGQV*HWPLPE
Trigger: CTCAGGGAGAGGCCAGTGTCAAACTTGACCTCCCTT...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGTCTCTCAGAGTACTGTaGGAAACACCCCAAATGAAA +
Preference number: 2 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLSLRVL*ETPQMK
Trigger: TTTCATTTGGGGTGTTTCTCACAGTACTCTGAGAGA...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAACTGGGAGAGGTGGTTaGGGAAAGCGAAGAGGTATC +
Preference number: 2 (lower is better)
Translates to: YTQDTLRAFREHETGSPRTGRGG*GKRRGI
Trigger: GATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGT...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGCTCCATGTTAGGGAATaGTGTGGTTGGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKLHVRE*CGWGCW
Trigger: CCAGCAGCCCCAACCACAGCATTCCCTAACATGGAG...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGAGGTTAGTGGTATATTaGTTCATTCGCAGTTACTAT +
Preference number: 2 (lower is better)
Translates to: FHLACVKAQIWGWMSGETRLVVY*FIRSYY
Trigger: ATAGTAACTGCGAATGAAGCAATATACCACTAACCT...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTTCTACTCTGATTGTTaGTTTTCATCTGGCAGTTGT +
Preference number: 2 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGFYSDC*FSSGSC
Trigger: ACAACTGCCAGATGAAAAGCAACAATCAGAGTAGAA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACCAAGAGGCAAAGGCCTaGCTGTCACACGTGAAGATC +
Preference number: 2 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDQEAKA*LSHVKI
Trigger: GATCTTCACGTGTGACAGCCAGGCCTTTGCCTCTTG...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTTGTGCTCCAAGCAGATaGCCTTTCATATCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGCAPSR*PFISRS
Trigger: GCTCCTGGATATGAAAGGCCATCTGCTTGGAGCACA...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTTGCTATATTTTGCCTaGGAGGCTACTGGATTTAGG +
Preference number: 2 (lower is better)
Translates to: GTRAWAETLARIYFRLRKLLYFA*EATGFR
Trigger: CCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAAGTATTTTTCCACTTaGCCTGCGTCAAGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERKYFST*PASRLR
Trigger: TCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTT...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATCTCTCTCCTGACCCCTaGCCTGGTGACTTCAGAGAA +
Preference number: 2 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNLSPDP*PGDFRE
Trigger: TTCTCTGAAGTCACCAGGCCAGGGGTCAGGAGAGAG...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGAGGAGCTTCATCGCTaGTATGAGGCTCAGTGCCAT +
Preference number: 2 (lower is better)
Translates to: YTQDTLRAFREHETGSPREELHR*YEAQCH
Trigger: ATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTACACAGCTTGCTCACTaGTGTTTGACCTTTATTACC +
Preference number: 2 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRTQLAH*CLTFIT
Trigger: GGTAATAAAGGTCAAACATCAGTGAGCAAGCTGTGT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGACTCAAAGCCTCCTTaGCTGTTTAGTTCCAAATCT +
Preference number: 2 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRDSKPP*LFSSKS
Trigger: AGATTTGGAACTAAACAGGCAAGGAGGCTTTGAGTC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGATGCTTGAGTAAATCGTaGTTGGCCTGCAGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: YTQDTLRAFREHETGSPRCLSKS*LACSLV
Trigger: CACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCA...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGCTTCCTCTTAATGAATaGTTCCATACTGCCGTTAAA +
Preference number: 2 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMLPLNE*FHTAVK
Trigger: TTTAACGGCAGTATGGAAGCATTCATTAAGAGGAAG...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATTCCGTGGGATTCCCATaGCTGGACGTGAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYSVGFP*LDVSCS
Trigger: GCTGCAGCTCACGTCCAGCCATGGGAATCCCACGGA...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATCGGTGGGAGATGTTTaGTGGCATGGATCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: MSGETSAICVCTSLNVNSSVGDV*WHGSEV
Trigger: TACCTCAGATCCATGCCACCAAACATCTCCCACCGA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACTCGGTGGGAGATGTTTaGTGGCATGGATCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDSVGDV*WHGSEV
Trigger: TACCTCAGATCCATGCCACCAAACATCTCCCACCGA...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTACTGGATTTAGGATCTaGGAGTATCTTGAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRTGFRI*EYLEGR
Trigger: TCTACCCTCAAGATACTCCCAGATCCTAAATCCAGT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGTTGCTATATTTTGCCTaGGAGGCTACTGGATTTAGG +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERLLYFA*EATGFR
Trigger: CCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAA...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATACCTGGGACACTTTCCTaGCTGCAAATATCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIPGTLS*LQISLR
Trigger: TCTGAGAGATATTTGCAGCCAGGAAAGTGTCCCAGG...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGACTATACTGGGAGAGGTaGTTGAGGAAAGCGAAGAGG +
Preference number: 2 (lower is better)
Translates to: YTQDTLRAFREHETGSPRLYWER*LRKAKR
Trigger: CCTCTTCGCTTTCCTCAACCACCTCTCCCAGTATAG...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATATCAGTGCCATTGTCATaGTCAACTTCATCGATGGCC +
Preference number: 2 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQISVPLS*STSSMA
Trigger: GGCCATCGATGAAGTTGACCATGACAATGGCACTGA...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATATATTCTGCCACTGTTTaGCCAGGGATGGCAAGAATG +
Preference number: 2 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIYSATV*PGMARM
Trigger: CATTCTTGCCATCCCTGGCCAAACAGTGGCAGAATA...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 90 bp AGGAAGGAAAAGTGCACTCTGGTTGTTCTGGTTCAAGGAACAGCTTaGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGTCAACA +
Preference number: 2 (lower is better)
Translates to: RKEKCTLVVLVQGTA*LLAGDNSHRKEVST
Trigger: TGTTGACACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACCAGAACAACCAGAGTGCACTTTTCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCCAGTGCATCACAGCCTaGTTTAAAATGAAAACGATG +
Preference number: 2 (lower is better)
Translates to: GHALNATSRPGHEKSSTFQCITA*FKMKTM
Trigger: CATCGTTTTCATTTTAAATCAGGCTGTGATGCACTG...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACATTTATGGCTATACACTaGGAGAGGCCTAGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTFMAIH*ERPRSP
Trigger: AGGAGACCTAGGCCTCTCTCAGTGTATAGCCATAAA...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAATATCTCGTTCATTTTaGTCGTCCACAAGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIISRSF*SSTRGS
Trigger: AGACCCCCTTGTGGACGATCAAAATGAACGAGATAT...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGACTCAAAGCCTCCTTaGCTGTTTAGTTCCAAATCT +
Preference number: 2 (lower is better)
Translates to: LCTLSGVQKALRGEKSLADSKPP*LFSSKS
Trigger: AGATTTGGAACTAAACAGGCAAGGAGGCTTTGAGTC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTCCAGTGTACACAGCTTaGTCACTGATGTTTGACCTT +
Preference number: 2 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGPVYTA*SLMFDL
Trigger: AAGGTCAAACATCAGTGAGCAAGCTGTGTACACTGG...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGTGCTCACTTCTGAAATaGCATTGGGAGGTTTCAAAA +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERCSLLK*HWEVSK
Trigger: TTTTGAAACCTCCCAATGGCATTTCAGAAGTGAGCA...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGCAGGAAAATTCCACTaGTCACTTCTGAAATGCCAT +
Preference number: 2 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAAGKFH*SLLKCH
Trigger: ATGGCATTTCAGAAGTGAGCAGTGGAATTTTCCTGC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCCGGAAGGGCTTTACTTaGCCAAGAGGCAAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: MLMMESRALIRMAGKFHCRKGFT*PRGKGL
Trigger: CAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCG...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCAGAAGAGGAGGTAAAATaGAATCGAAGGAGAGCGACC +
Preference number: 2 (lower is better)
Translates to: MSGETSAICVCTSLNVNSEEEVK*NRRRAT
Trigger: GGTCGCTCTCCTTCGATTCCATTTTACCTCCTCTTC...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCTAGGTCCCTCCCTTTaGGTGTATTTACCTTTTCGC +
Preference number: 2 (lower is better)
Translates to: GSCGRLLYFAWEATGFRILGPSL*VYLPFR
Trigger: GCGAAAAGGTAAATACACCCAAAGGGAGGGACCTAG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCCCGTTAAAGAGTTTATaGCTATACACTGAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACPLKSL*LYTERG
Trigger: GCCTCTCTCAGTGTATAGCCATAAACTCTTTAACGG...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGCTTGTCCTGAATCCTaGTTCCTGGTTCGAGCATTT +
Preference number: 2 (lower is better)
Translates to: YTQDTLRAFREHETGSPRACPES*FLVRAF
Trigger: AAATGCTCGAACCAGGAACCAGGATTCAGGACAAGC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCAGCCTGATTTAAAATaGAAACGATGTGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSQPDLK*KRCDSK
Trigger: CTTTGAGTCACATCGTTTTCATTTTAAATCAGGCTG...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCCAGATTTTTCTACTCTaGTTGTTGCTTTTCATCTGG +
Preference number: 2 (lower is better)
Translates to: GHALNATSRPGHEKSSTFQIFLL*LLLFIW
Trigger: CCAGATGAAAAGCAACAATCAGAGTAGAAAAATCTG...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATAAAATCCACACGGTCTaGTTGGTGTTATGTATATCA +
Preference number: 2 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDKIHTV*LVLCIS
Trigger: TGATATACATAACACCAATCAGACCGTGTGGATTTT...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAGAGATCCTGGCACTCTaGAGATCCCCTGCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQEILAL*RSPAAG
Trigger: TCCAGCAGCAGGGGATCTTCAGAGTGCCAGGATCTC...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACACTGAAGATCCCCTGCTaGTGGAGTCCATATAAATTG +
Preference number: 2 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTLKIPC*WSPYKL
Trigger: CAATTTATATGGACTCCAGCAGCAGGGGATCTTCAG...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATAGAAGTCTTGTGTCCTaGCTGGACAGTATAGCATCC +
Preference number: 2 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNRSLVS*LDSIAS
Trigger: GGATGCTATACTGTCCAGCCAGGACACAAGACTTCT...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTTCCACACGGTCTGATTaGTGTTATGTATATCAGGCA +
Preference number: 2 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGSTRSD*CYVYQA
Trigger: TGCCTGATATACATAACACCAATCAGACCGTGTGGA...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 90 bp CTGATTGTTGCTTTTCATCTGGCAGTTGTGGCAGATTGCTATATTTaGCCTGGGAGGCTACTGGATTTAGGATCTGGGAGTATCTTGAGG +
Preference number: 2 (lower is better)
Translates to: LIVAFHLAVVADCYI*PGRLLDLGSGSILR
Trigger: CCTCAAGATACTCCCAGATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCCAGATGAAAAGCAACAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 90 bp AAACAAAATAGACCAGCCACTCTGAAGCAATCAGAATCAAACCTATaGCCAAACCATGTAAACAGTCACACTGCCGGGAACAAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: KQNRPATLKQSESNL*PNHVNSHTAGNKGL
Trigger: CAGGCCCTTGTTCCCGGCAGTGTGACTGTTTACATGGTTTGGCAATAGGTTTGATTCTGATTGCTTCAGAGTGGCTGGTCTATTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGAGAACCGGGGAAGTTaGCATGAAATGTCAGCATTA +
Preference number: 2 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNENRGS*HEMSAL
Trigger: TAATGCTGACATTTCATGTCAACTTCCCCGGTTCTC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATACAGATTTGCCCGTGTaGCATTATCCAGAAACAGCT +
Preference number: 2 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNTDLPV*HYPETA
Trigger: AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGT...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACAGATTGCTATATTTTaGCTGGGAGGCTACTGGATT +
Preference number: 2 (lower is better)
Translates to: MSGETSAICVCTSLNVNSQIAIF*LGGYWI
Trigger: AATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAACCAGTAACTGCCAATaGCAGTTAGGTCAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQITSNCQ*QLGQEN
Trigger: ATTTTCTTGACCTAACTGGCATTGGCAGTTACTGGT...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGGACTTCTGGAGACAGTaGGAGTCTGTTTTTGTTTGT +
Preference number: 2 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRDFWRQ*ESVFVC
Trigger: ACAAACAAAAACAGACTCCCACTGTCTCCAGAAGTC...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTTATTACCCTATTTTATaGAGCAGAACAGTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGYYPIL*SRTVRL
Trigger: GAGCCTGACTGTTCTGCTCCATAAAATAGGGTAATA...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATTGTTGCTTTTCATCTaGCAGTTGTGGCAGATTGCT +
Preference number: 2 (lower is better)
Translates to: MSGETSAICVCTSLNVNSLLLFI*QLWQIA
Trigger: AGCAATCTGCCACAACTGCCAGATGAAAAGCAACAA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGTTTGGTGAGTGGCATTaGCTAAAATTTAATTGTAGC +
Preference number: 2 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERFGEWH*LKFNCS
Trigger: GCTACAATTAAATTTTAGCCAATGCCACTCACCAAA...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 90 bp TATATTTTGCCTGGGAGGCTACTGGATTTAGGATCTGGGAGTATCTaGAGGGTAGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATA +
Preference number: 2 (lower is better)
Translates to: YILPGRLLDLGSGSI*RVEIRSLVSWLDSI
Trigger: TATACTGTCCAGCCAGGACACAAGACTTCTGATTTCTACCCTCAAGATACTCCCAGATCCTAAATCCAGTAGCCTCCCAGGCAAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGAGCATTTCTAGGTTTTaGAGTATTCCACACCACTGT +
Preference number: 2 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRSISRF*SIPHHC
Trigger: ACAGTGGTGTGGAATACTCCAAAACCTAGAAATGCT...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACCACCACTTCATCCAATaGGCTGAAATGTTAATGATG +
Preference number: 2 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDHHFIQ*AEMLMM
Trigger: CATCATTAACATTTCAGCCCATTGGATGAAGTGGTG...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAGTGACGAGGATTTGTTaGATCTGGTGCACCCTCTCG +
Preference number: 2 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQVTRIC*IWCTLS
Trigger: CGAGAGGGTGCACCAGATCCAACAAATCCTCGTCAC...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 90 bp TCTCCAGGACTCAGTTTTTCTATCAGGATTAGGAAGGATGTCTGTTaGATACAGAGTCCATTGATGTTTCTTATCCACCTCCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SPGLSFSIRIRKDVC*IQSPLMFLIHLPVP
Trigger: TGGGACAGGGAGGTGGATAAGAAACATCAATGGACTCTGTATCAAACAGACATCCTTCCTAATCCTGATAGAAAAACTGAGTCCTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATGCAGTTGTGGCAGATTaGTATATTTTGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYAVVAD*YILPGR
Trigger: CCTCCCAGGCAAAATATAGCAATCTGCCACAACTGC...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATCACCAAATAACTCGGTaGGAGATGTTTGGTGGCATG +
Preference number: 2 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYHQITR*EMFGGM
Trigger: CATGCCACCAAACATCTCCCACCGAGTTATTTGGTG...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATATTCCTAGAATAGACTaGACGTCGGTTACACATAAA +
Preference number: 2 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNIPRID*TSVTHK
Trigger: TTTATGTGTAACCGACGTTCAGTCTATTCTAGGAAT...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAACACACAGGATACTTTaGGAGCCTTCAGGGAACATG +
Preference number: 2 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQTHRIL*EPSGNM
Trigger: CATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGT...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTAGGTTAGTGGTATATTaGTTCATTCGCAGTTACTAT +
Preference number: 2 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFRLVVY*FIRSYY
Trigger: ATAGTAACTGCGAATGAAGCAATATACCACTAACCT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGTTGTTTGTGTTTTTCTaGAGGTTAGTGGTATATTGC +
Preference number: 2 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRLFVFF*RLVVYC
Trigger: GCAATATACCACTAACCTGCAGAAAAACACAAACAA...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCTTGGTGGCATGGATCTaGGGTAAATCTAAGTTTCAT +
Preference number: 2 (lower is better)
Translates to: MLMMESRALIRMAGKFHCLVAWI*GKSKFH
Trigger: ATGAAACTTAGATTTACCTCAGATCCATGCCACCAA...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATAAAATGAAAACGATGTaGCTCAAAGCCTCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYKMKTM*LKASLP
Trigger: AGGCAAGGAGGCTTTGAGTCACATCGTTTTCATTTT...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATGGTGCAAAGATTTGGTaGGTGGCATTGGCTAAAATT +
Preference number: 2 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYGAKIW*VALAKI
Trigger: AATTTTAGCCAATGCCACTCACCAAATCTTTGCACC...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTTGTTTGTGTTTTTCTaGAGGTTAGTGGTATATTGC +
Preference number: 2 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANLFVFF*RLVVYC
Trigger: GCAATATACCACTAACCTGCAGAAAAACACAAACAA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAACAAATCAGGAGGTTCTaGTTGCCAATGACCAGTAAC +
Preference number: 2 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQQIRRF*LPMTSN
Trigger: GTTACTGGTCATTGGCAACCAGAACCTCCTGATTTG...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATTTGGTGGCATGGATCTaGGGTAAATCTAAGTTTCAT +
Preference number: 2 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYLVAWI*GKSKFH
Trigger: ATGAAACTTAGATTTACCTCAGATCCATGCCACCAA...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATCAGTGCATCACAGCCTaGTTTAAAATGAAAACGATG +
Preference number: 2 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYQCITA*FKMKTM
Trigger: CATCGTTTTCATTTTAAATCAGGCTGTGATGCACTG...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATTTCATCTGGCAGTTGTaGCAGATTGCTATATTTTGC +
Preference number: 2 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYFIWQL*QIAIFC
Trigger: GCAAAATATAGCAATCTGCCACAACTGCCAGATGAA...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCTATATACACTTAGTATaGGTGTGTCCAGATCTAGTA +
Preference number: 2 (lower is better)
Translates to: MLMMESRALIRMAGKFHCYIHLV*VCPDLV
Trigger: TACTAGATCTGGACACACGCATACTAAGTGTATATA...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR GCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAACCTCATTTTAACCCATaGCATAATTTGCTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQPHFNP*HNLLGA
Trigger: AGCACCAAGCAAATTATGGCATGGGTTAAAATGAGG...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 90 bp AGAATCTTTGAGACAAGAAAGGCAACAGATACACAAACAACTAAATaGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAA +
Preference number: 2 (lower is better)
Translates to: RIFETRKATDTQTTK*FLQFGIHWLIHAWQ
Trigger: TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGTTTGTGTATCTGTTGCCTTTCTTGTCTCAAAGATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 72 bp CACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTaGGCTGCAGCCAGCGCCCGGGCCTCAGCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: HARGPWDSHGWT*AAASARASALH
Trigger: GTGCAGAGCTGAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp CGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATaGCTGGACGTGAGCTGCAGCCAGCGCCCGGGCCTC +
Preference number: 3 (lower is better)
Translates to: RLLTRERSVGFP*LDVSCSQRPGL
Trigger: GAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp GAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCTaGAGCCAGCGCCCGGGCCTCAGCTCTGCACAGACA +
Preference number: 3 (lower is better)
Translates to: ERSVGFPWLDVS*SQRPGLSSAQT
Trigger: TGTCTGTGCAGAGCTGAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGAATCCCACGGACCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp CAGCTCTGCACAGACACACCCTCCCAGACGGACCTCTaGCCTCCAAGGCCAGGGTCACTGGGAAGCACGTGG +
Preference number: 3 (lower is better)
Translates to: QLCTDTPSQTDL*PPRPGSLGSTW
Trigger: CCACGTGCTTCCCAGTGACCCTGGCCTTGGAGGGCAGAGGTCCGTCTGGGAGGGTGTGTCTGTGCAGAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp GGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTaGCACGCGAGAGGTCCGTGGGATTCCCATGGCTGG +
Preference number: 3 (lower is better)
Translates to: GCWSSSTPLVVC*HARGPWDSHGW
Trigger: CCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp CCCTGGCCCCAGTCTGAACTGGGCGCTCACGGCTCATaGGTTTCATGCAAGACGGCACCAGCCACAGTGCAT +
Preference number: 3 (lower is better)
Translates to: PWPQSELGAHGS*VSCKTAPATVH
Trigger: ATGCACTGTGGCTGGTGCCGTCTTGCATGAAACGCATGAGCCGTGAGCGCCCAGTTCAGACTGGGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp GAAAGTGCCAAGGACTGCCCCTCCCTGGCCCCAGTCTaGACTGGGCGCTCACGGCTCATGCGTTTCATGCAA +
Preference number: 3 (lower is better)
Translates to: ESAKDCPSLAPV*TGRSRLMRFMQ
Trigger: TTGCATGAAACGCATGAGCCGTGAGCGCCCAGTTCAGACTGGGGCCAGGGAGGGGCAGTCCTTGGCACTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp CTCGCCAACCTTCTCCCATGCCTTTGGGAGTACAGTTaGCCTTTGGCCTCCGGGTGGAAGGGCAGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: LANLLPCLWEYS*PLASGWKGRVS
Trigger: AGAGACCCTGCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGGCATGGGAGAAGGTTGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp GAAAGGAGGTGTCAACAAGGGGCAGCGATGGCCATGTaGCCAGTCCCAGAGGGACAGCAGGACACTGGCAGA +
Preference number: 3 (lower is better)
Translates to: ERRCQQGAAMAM*PVPEGQQDTGR
Trigger: TCTGCCAGTGTCCTGCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGGAGGTCAGGAGGGCTaGGACCTGACAGCAAAGTCC +
Preference number: 3 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKGGQEG*DLTAKS
Trigger: GGACTTTGCTGTCAGGTCCAAGCCCTCCTGACCTCC...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp CGACTCCCAGCCCAGCAGGGGCTAACCCCATGGTTGTaGGCCAGCCACTCTTCTTTCTGGGTTTCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: RLPAQQGLTPWL*ASHSSFWVSQE
Trigger: CTCCTGAGAAACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCTGGGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp GGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTaGGGAGACGTCTGCCATCTGTGTGTGTACATCCCT +
Preference number: 3 (lower is better)
Translates to: GLRQGSDLGLDE*GDVCHLCVYIP
Trigger: AGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTGGTGACGAGGATTTGTaGGATCTGGTGCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGGDEDL*DLVHPL
Trigger: GAGAGGGTGCACCAGATCCAACAAATCCTCGTCACC...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTCCTTTGGGAGTACAGTaGGCCTTTGGCCTCCGGGTG +
Preference number: 3 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTPLGVQ*AFGLRV
Trigger: CACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGG...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp GTGCCGCATTCTGCTCTTTCCCCTTCGCCCAGGGTCTaGTTGAGTAAATCGTGCTTGGCCTGCAGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: VPHSALSPSPRV*LSKSCLACSLV
Trigger: CACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCAGACCCTGGGCGAAGGGGAAAGAGCAGAATGCGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 72 bp ACGCGGGGAAGGGTGACGAGGATTTGTTGGATCTGGTaGACCCTCTCGGCTGGGTTCTCCAGTTCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: TRGRVTRICWIW*TLSAGFSSSLL
Trigger: GAGAAGAGAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 72 bp TATGGGGAGGAAGCCCCACTGGGTGAGTCCCATGGCTaGTTCTTCGCTGACCCAGCAAGCCCTATTCTCTCT +
Preference number: 3 (lower is better)
Translates to: YGEEAPLGESHG*FFADPASPILS
Trigger: AGAGAGAATAGGGCTTGCTGGGTCAGCGAAGAAGCAGCCATGGGACTCACCCAGTGGGGCTTCCTCCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp CTGACGCAGCCTCTGCTCCTAGCCAGTGTCAAATCTTaGGCAGGTCACAGCACAGCCCAAGGCCTTACTCTC +
Preference number: 3 (lower is better)
Translates to: LTQPLLLASVKS*AGHSTAQGLTL
Trigger: GAGAGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAGCAGAGGCTGCGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTaGATGAGTGGGGAGACGTCTGCCATCTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: FHLACVKAQIWG*MSGETSAICVC
Trigger: ACACACACAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp ACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTTaGATCTGGTGCACCCTCTCGGCTGGGTTCTCCAGT +
Preference number: 3 (lower is better)
Translates to: TMTTRGRVTRIC*IWCTLSAGFSS
Trigger: ACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGAGTACAGTTGGCCTTaGGCCTCCGGGTGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAEYSWP*ASGWKG
Trigger: GCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACTC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTCCTTTGGGAGTACAGTaGGCCTTTGGCCTCCGGGTG +
Preference number: 3 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRPLGVQ*AFGLRV
Trigger: CACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGG...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGCCGGAAGGGCTTTACTaGGCCAAGAGGCAAAGGCCT +
Preference number: 3 (lower is better)
Translates to: GTRAWAETLARIYFRLRKPEGLY*AKRQRP
Trigger: AGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCGG...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp CAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTaGCATTGTCATGGTCAACTTCATCGATGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: QPEELHRWYEAQ*HCHGQLHRWPL
Trigger: CAGGGGCCATCGATGAAGTTGACCATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp GTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTaGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTC +
Preference number: 3 (lower is better)
Translates to: VVFCLHVRECCG*GCWSSSTPLVV
Trigger: GACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCCAACCACAGCATTCCCTAACATGGAGGCAAAATACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp TGGAATCGAAGGAGAGCGACCCGGAAGGGCTTTACTTaGCCAAGAGGCAAAGGCCTGGCTGTCACACGTGAA +
Preference number: 3 (lower is better)
Translates to: WNRRRATRKGFT*PRGKGLAVTRE
Trigger: TTCACGTGTGACAGCCAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCGGGTCGCTCTCCTTCGATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp CCTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTaGCTGCTCAGAGGAGAGGAGACCCCAGAGAACCGG +
Preference number: 3 (lower is better)
Translates to: PGQLWICGECSM*LLRGEETPENR
Trigger: CCGGTTCTCTGGGGTCTCCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp CCCTTCTCTCGGCTCCCCTGGGCAGCTTTGGATATGTaGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: PFSRLPWAALDM*GMFYVAAQRRG
Trigger: TCCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp ATGGGTTTCTGGAACGACTGGGCTGGTGGGAGGTTGTaGTGTCCTCTCTCCTTTTCCATGGTCCTAGGCTCC +
Preference number: 3 (lower is better)
Translates to: MGFWNDWAGGRL*CPLSFSMVLGS
Trigger: GGAGCCTAGGACCATGGAAAAGGAGAGAGGACACCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTGATATCTCGTTCATTTaGATCGTCCACAAGGGGGTC +
Preference number: 3 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGDISFI*IVHKGV
Trigger: GACCCCCTTGTGGACGATCAAAATGAACGAGATATC...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGTACTGGGAGAGGTGGTaGAGGAAAGCGAAGAGGTAT +
Preference number: 3 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRYWERW*RKAKRY
Trigger: ATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGTA...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp GACTCAGACTCTGGGCCTTTTGACTCCAAACTTCAGTaGCCTCGAGAGAGAGGAAGCGTGGGAACAGTAGGG +
Preference number: 3 (lower is better)
Translates to: DSDSGPFDSKLQ*PRERGSVGTVG
Trigger: CCCTACTGTTCCCACGCTTCCTCTCTCTCGAGGCCACTGAAGTTTGGAGTCAAAAGGCCCAGAGTCTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp GTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTaGGGCTGGATGAGTGGGGAGACGTCTGCCATCTGT +
Preference number: 3 (lower is better)
Translates to: VFFHLACVKAQI*GWMSGETSAIC
Trigger: ACAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCACAGGGCACACAGATTaGCCCGTGTGCCATTATCCA +
Preference number: 3 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPTGHTD*PVCHYP
Trigger: TGGATAATGGCACACGGGCAAATCTGTGTGCCCTGT...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCAGCCAGTGTCAAATCTaGGGCAGGTCACAGCACAGC +
Preference number: 3 (lower is better)
Translates to: GHALNATSRPGHEKSSTFSQCQI*GRSQHS
Trigger: GCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCT...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAAAGTATTTTTCCACTaGGCCTGCGTCAAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGKVFFH*ACVKAQ
Trigger: CTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp CCCGGAAGGGCTTTACTTGGCCAAGAGGCAAAGGCCTaGCTGTCACACGTGAAGATCATGCACCCATTTCTA +
Preference number: 3 (lower is better)
Translates to: PGRALLGQEAKA*LSHVKIMHPFL
Trigger: TAGAAATGGGTGCATGATCTTCACGTGTGACAGCCAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp AGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGCTTTaGATATGTGGGGAATGTTCTATGTGGCTGCTCAGA +
Preference number: 3 (lower is better)
Translates to: SKVPSLGSPGQL*ICGECSMWLLR
Trigger: TCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAAGGGACTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp AGTGCCATTGTCATGGTCAACTTCATCGATGGCCCCTaGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCC +
Preference number: 3 (lower is better)
Translates to: SAIVMVNFIDGP*LAVWAVTIFFP
Trigger: GGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCATCGATGAAGTTGACCATGACAATGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCACAGGGCACACAGATTaGCCCGTGTGCCATTATCCA +
Preference number: 3 (lower is better)
Translates to: GHALNATSRPGHEKSSTFTGHTD*PVCHYP
Trigger: TGGATAATGGCACACGGGCAAATCTGTGTGCCCTGT...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGGATCTGGGAGTATCTaGAGGGTAGAAATCAGAAGT +
Preference number: 3 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKGSGSI*RVEIRS
Trigger: ACTTCTGATTTCTACCCTCAAGATACTCCCAGATCC...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp AGAAGAAGGATCATCTCGGAGGGGGACCCAAAGCTCTaGCTCATGCATTCTGGGGGCCACTGTGAACCTTTA +
Preference number: 3 (lower is better)
Translates to: RRRIISEGDPKL*LMHSGGHCEPL
Trigger: TAAAGGTTCACAGTGGCCCCCAGAATGCATGAGTCAGAGCTTTGGGTCCCCCTCCGAGATGATCCTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 72 bp AGGGTAAGTAACAGCGGCCCACAGGGCACACAGATTTaGCCGTGTGCCATTATCCAGAAACAGCTCATCTCT +
Preference number: 3 (lower is better)
Translates to: RVSNSGPQGTQI*PCAIIQKQLIS
Trigger: AGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTGTTACTTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp AAGTCTAATTCCCAAGCTCGCAATTCCCTCCGATTGTaGACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGT +
Preference number: 3 (lower is better)
Translates to: KSNSQARNSLRL*TLSGVQKALRG
Trigger: ACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGAGGGAATTGCGAGCTTGGGAATTAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACCGGAAGGGCTTTACTaGGCCAAGAGGCAAAGGCCT +
Preference number: 3 (lower is better)
Translates to: MSGETSAICVCTSLNVNSPEGLY*AKRQRP
Trigger: AGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCGG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGGAGGTCAGGAGGGCTaGGACCTGACAGCAAAGTCC +
Preference number: 3 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNGGQEG*DLTAKS
Trigger: GGACTTTGCTGTCAGGTCCAAGCCCTCCTGACCTCC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGATCGCCCAGGGTCTGCTaGAGTAAATCGTGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: YTQDTLRAFREHETGSPRSPRVC*SKSCLA
Trigger: GGCCAAGCACGATTTACTCAAGCAGACCCTGGGCGA...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTCAGGTTAGTGGTATATaGCTTCATTCGCAGTTACTA +
Preference number: 3 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGQVSGI*LHSQLL
Trigger: TAGTAACTGCGAATGAAGCAATATACCACTAACCTG...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGGCAGTTGTGGCAGATaGCTATATTTTGCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAGSCGR*LYFAWE
Trigger: CTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp GTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTaGGAAATCGTTAGCACTGAAACAAGGAAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: VHSVRGSKGASR*EIVSTETRKGK
Trigger: CTTGCCTTTCCTTGTTTCAGTGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp GGTCACGAGAAGTCCTCCACATTCGTGCCTCCTGAATaGCAGAGAAATATACCCAACAAGGCACTCCAAGGG +
Preference number: 3 (lower is better)
Translates to: GHEKSSTFVPPE*QRNIPNKALQG
Trigger: CCCTTGGAGTGCCTTGTTGGGTATATTTCTCTGTCATTCAGGAGGCACGAATGTGGAGGACTTCTCGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp ACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTaGTGGATTCCATTCATACCGGGTGCTGTCAAGAGC +
Preference number: 3 (lower is better)
Translates to: THGSLPDLTFEA*WIPFIPGAVKS
Trigger: GCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp TTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTaGCCATTAAGAGTCACTCGACTTGTATCCACAGAG +
Preference number: 3 (lower is better)
Translates to: FSMVLGSQDLAY*PLRVTRLVSTE
Trigger: CTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAAAGGGTGACGAGGATTaGTTGGATCTGGTGCACCCT +
Preference number: 3 (lower is better)
Translates to: YTQDTLRAFREHETGSPRKGDED*LDLVHP
Trigger: AGGGTGCACCAGATCCAACAAATCCTCGTCACCCTT...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 72 bp AAGAGAAAGCCAATGTTCAGTGAACGTCGATGGGACTaGGTGCTGTGGAGGGTGAGTGAGACATGCATAGTG +
Preference number: 3 (lower is better)
Translates to: KRKPMFSERRWD*VLWRVSETCIV
Trigger: CACTATGCATGTCTCACTCACCCTCCACAGCACTCAGTCCCATCGACGTTCACTGAACATTGGCTTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp ACCAGGTCACGAGAAGTCCTCCACATTCGTGCCTCCTaGATGACAGAGAAATATACCCAACAAGGCACTCCA +
Preference number: 3 (lower is better)
Translates to: TRSREVLHIRAS*MTEKYTQQGTP
Trigger: TGGAGTGCCTTGTTGGGTATATTTCTCTGTCATTCAGGAGGCACGAATGTGGAGGACTTCTCGTGACCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp AGCCAGCCACTCTTCTTTCTGGGTTTCTCAGGAGAGTaGGGCATTTGCACTAGTGTGGAACCATCTGGATGT +
Preference number: 3 (lower is better)
Translates to: SQPLFFLGFSGE*GICTSVEPSGC
Trigger: ACATCCAGATGGTTCCACACTAGTGCAAATGCCTCACTCTCCTGAGAAACCCAGAAAGAAGAGTGGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp CATCACGACCAGGTCACGAGAAGTCCTCCACATTCGTaGCTCCTGAATGACAGAGAAATATACCCAACAAGG +
Preference number: 3 (lower is better)
Translates to: HHDQVTRSPPHS*LLNDREIYPTR
Trigger: CCTTGTTGGGTATATTTCTCTGTCATTCAGGAGGCACGAATGTGGAGGACTTCTCGTGACCTGGTCGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp TTTCATCCCTTGGGAATCCATCTCTCTCCTGACCCCTaGCCTGGTGACTTCAGAGAAAAGACTCCAAAGTCT +
Preference number: 3 (lower is better)
Translates to: FHPLGIHLSPDP*PGDFREKTPKS
Trigger: AGACTTTGGAGTCTTTTCTCTGAAGTCACCAGGCCAGGGGTCAGGAGAGAGATGGATTCCCAAGGGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp AAATTTCTTGATGGGTTTCTGGAACGACTGGGCTGGTaGGAGGTTGTGGTGTCCTCTCTCCTTTTCCATGGT +
Preference number: 3 (lower is better)
Translates to: KFLDGFLERLGW*EVVVSSLLFHG
Trigger: ACCATGGAAAAGGAGAGAGGACACCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp CATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCTaGATTCCATTCATACCGGGTGCTGTCAAGAGCAAA +
Preference number: 3 (lower is better)
Translates to: HGSLPDLTFEAC*IPFIPGAVKSK
Trigger: TTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACATTGAGTAAATCGTGCTaGGCCTGCAGCTTGGTGATG +
Preference number: 3 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTLSKSC*ACSLVM
Trigger: CATCACCAAGCTGCAGGCCAAGCACGATTTACTCAA...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 72 bp TTATGGAGCAGAACAGTCAGGCTCAATGAGGTGGAGTaGCAAACCCTAAGTCAGAAGGCTCCTAAGTGCTCA +
Preference number: 3 (lower is better)
Translates to: LWSRTVRLNEVE*QTLSQKAPKCS
Trigger: TGAGCACTTAGGAGCCTTCTGACTTAGGGTTTGTCACTCCACCTCATTGAGCCTGACTGTTCTGCTCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp ATACACACAGGATACTTTGAGAGCCTTCAGGGAACATaGAACTGGCTCTCCCAGACTGTGGCTTCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: IHTGYFESLQGT*NWLSQTVASSF
Trigger: GAAGGAAGAAGCCACAGTCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp TCTCTGAACTGCTGGTTCCAGCCGATAGCCAAAATATaGCTCAATTTCCCTGTGTCTCTTCCCACTCCGATT +
Preference number: 3 (lower is better)
Translates to: SLNCWFQPIAKI*LNFPVSLPTPI
Trigger: AATCGGAGTGGGAAGAGACACAGGGAAATTGAGCCATATTTTGGCTATCGGCTGGAACCAGCAGTTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCACTAGGTCCCTCCCTTaGGGTGTATTTACCTTTTCG +
Preference number: 3 (lower is better)
Translates to: GSCGRLLYFAWEATGFRITRSLP*GVFTFS
Trigger: CGAAAAGGTAAATACACCCAAAGGGAGGGACCTAGT...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGTTCAAGGAACAGCTTaGTTATTGGCCGGGGACAAC +
Preference number: 3 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNVQGTA*LLAGDN
Trigger: GTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAAC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGTTTTGATGACTTCATaGATGTGTGCCTGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: YTQDTLRAFREHETGSPRVLMTS*MCAWQD
Trigger: GTCCTGCCAGGCACACATCAATGAAGTCATCAAAAC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTCTTCCCCTTGTACAATaGGTTATATTGAAGACTACT +
Preference number: 3 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRLPLVQ*VILKTT
Trigger: AGTAGTCTTCAATATAACCAATTGTACAAGGGGAAG...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAGAGCACAGTGACCCCTaGACTGTCTCTGCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQEHSDP*TVSAAH
Trigger: GTGAGCTGCAGAGACAGTCAAGGGGTCACTGTGCTC...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 72 bp GTATGTAGAGAGAATGTCGAGAGAGGAAGTTTCCAGTaGCGATATGCGGGAGAAGCCATGTGGTATTTTGCC +
Preference number: 3 (lower is better)
Translates to: VCRENVERGSFQ*RYAGEAMWYFA
Trigger: GGCAAAATACCACATGGCTTCTCCCGCATATCGTCACTGGAAACTTCCTCTCTCGACATTCTCTCTACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR GCA 72 bp AGAGAATGTCGAGAGAGGAAGTTTCCAGTGACGATATaGGGGAGAAGCCATGTGGTATTTTGCCTCCATGTT +
Preference number: 3 (lower is better)
Translates to: RECRERKFPVTI*GRSHVVFCLHV
Trigger: AACATGGAGGCAAAATACCACATGGCTTCTCCCGCATATCGTCACTGGAAACTTCCTCTCTCGACATTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp AACGATATCCAGAAGAGGGCAACATTTATCATCACGTaGGGACAGGCAACCAGCAATTTCCTAGGGTGGTTT +
Preference number: 3 (lower is better)
Translates to: NDIQKRATFIIT*GQATSNFLGWF
Trigger: AAACCACCCTAGGAAATTGCTGGTTGCCTGTCCCCACGTGATGATAAATGTTGCCCTCTTCTGGATATCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp TTTAAATTTCTTGATGGGTTTCTGGAACGACTGGGCTaGTGGGAGGTTGTGGTGTCCTCTCTCCTTTTCCAT +
Preference number: 3 (lower is better)
Translates to: FKFLDGFLERLG*WEVVVSSLLFH
Trigger: ATGGAAAAGGAGAGAGGACACCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAAATTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp TACTCTTTAAATTTCTTGATGGGTTTCTGGAACGACTaGGCTGGTGGGAGGTTGTGGTGTCCTCTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: YSLNFLMGFWND*AGGRLWCPLSF
Trigger: AAAGGAGAGAGGACACCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAAATTTAAAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp TGGCATTCATTGGCTGATTCATGCATGGCAAAGACCTaGACTCATGGTTCTCTGCCTGATTTGACCTTTGAG +
Preference number: 3 (lower is better)
Translates to: WHSLADSCMAKT*THGSLPDLTFE
Trigger: CTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCATGCATGAATCAGCCAATGAATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR-3UTR CAA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATTTTCCTAGGGTGGTTTaGGTCTGTTTTTCCTGTCAC +
Preference number: 3 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNFPRVV*VCFSCH
Trigger: GTGACAGGAAAAACAGACCAAAACCACCCTAGGAAA...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAACCAGGACCTGGCCTATaGGCCATTAAGAGTCACTCG +
Preference number: 3 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQPGPGL*AIKSHS
Trigger: CGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTGG...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 72 bp ATAGATAAGGAAATAGAGGCCAGAGGTGATGTGGCTTaGCTCAGATTACATGACCATAAGGACTCCCTCTGT +
Preference number: 3 (lower is better)
Translates to: IDKEIEARGDVA*LRLHDHKDSLC
Trigger: ACAGAGGGAGTCCTTATGGTCATGTAATCTGAGGCAAGCCACATCACCTCTGGCCTCTATTTCCTTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 72 bp ATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATaGATGGCAAAGACCTGGACTCATGGTTCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: IVPAIWHSLADS*MAKTWTHGSLP
Trigger: AGGCAGAGAACCATGAGTCCAGGTCTTTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp TTATTTTTCCCAACCACATGTAATACTGTGCTACGATaGGGCTTAGGTTCTCACTATCCCCCGTCTCTACAC +
Preference number: 3 (lower is better)
Translates to: LFFPTTCNTVLR*GLGSHYPPSLH
Trigger: GTGTAGAGACGGGGGATAGTGAGAACCTAAGCCCCATCGTAGCACAGTATTACATGTGGTTGGGAAAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp TCATCTGGCAGTTGTGGCAGATTGCTATATTTTGCCTaGGAGGCTACTGGATTTAGGATCTGGGAGTATCTT +
Preference number: 3 (lower is better)
Translates to: SSGSCGRLLYFA*EATGFRIWEYL
Trigger: AAGATACTCCCAGATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp TTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATaGCAAAGACCTGGACTCATGGTTCTCTGCCTGATT +
Preference number: 3 (lower is better)
Translates to: FLQFGIHWLIHA*QRPGLMVLCLI
Trigger: AATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR GCA 72 bp CTGATTGTTGCTTTTCATCTGGCAGTTGTGGCAGATTaGTATATTTTGCCTGGGAGGCTACTGGATTTAGGA +
Preference number: 3 (lower is better)
Translates to: LIVAFHLAVVAD*YILPGRLLDLG
Trigger: TCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCCAGATGAAAAGCAACAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp AGTATCTTGAGGGTAGAAATCAGAAGTCTTGTGTCCTaGCTGGACAGTATAGCATCCAGCATGCAAACACAT +
Preference number: 3 (lower is better)
Translates to: SILRVEIRSLVS*LDSIASSMQTH
Trigger: ATGTGTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCTACCCTCAAGATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR-3UTR CAA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATCAGGTTAGTGGTATATaGCTTCATTCGCAGTTACTA +
Preference number: 3 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNQVSGI*LHSQLL
Trigger: TAGTAACTGCGAATGAAGCAATATACCACTAACCTG...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp ATTTCCCTGTGTCTCTTCCCACTCCGATTTCTTCATTaGATAGAAACCTTTCATCCCTTGGGAATCCATCTC +
Preference number: 3 (lower is better)
Translates to: ISLCLFPLRFLH*IETFHPLGIHL
Trigger: GAGATGGATTCCCAAGGGATGAAAGGTTTCTATTCAATGAAGAAATCGGAGTGGGAAGAGACACAGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR TCA 72 bp TTCCATACTGCCGTTAAAGAGTTTATGGCTATACACTaGGAGAGGCCTAGGTCTCCTCATTTTCTGTGGTTT +
Preference number: 3 (lower is better)
Translates to: FHTAVKEFMAIH*ERPRSPHFLWF
Trigger: AAACCACAGAAAATGAGGAGACCTAGGCCTCTCTCAGTGTATAGCCATAAACTCTTTAACGGCAGTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 72 bp CAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTaGTTCATGCATGGCAAAGACCTGGACTCATGGTTC +
Preference number: 3 (lower is better)
Translates to: QLNCSCNLAFIG*FMHGKDLDSWF
Trigger: GAACCATGAGTCCAGGTCTTTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp CTGCAAATCCCACCAAATAACTCGGTGGGAGATGTTTaGTGGCATGGATCTGAGGTAAATCTAAGTTTCATA +
Preference number: 3 (lower is better)
Translates to: LQIPPNNSVGDV*WHGSEVNLSFI
Trigger: TATGAAACTTAGATTTACCTCAGATCCATGCCACCAAACATCTCCCACCGAGTTATTTGGTGGGATTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp CAGGTTAGTGGTATATTGCTTCATTCGCAGTTACTATaGGCCTTTAAGTTCTCCCAGAAAAGTCCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: QVSGILLHSQLL*AFKFSQKSPCK
Trigger: TTTGCAGGGACTTTTCTGGGAGAACTTAAAGGCCCATAGTAACTGCGAATGAAGCAATATACCACTAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp CTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCTaGGAGTATCTTGAGGGTAGAAATCAGAAGTCTTGT +
Preference number: 3 (lower is better)
Translates to: LYFAWEATGFRI*EYLEGRNQKSC
Trigger: ACAAGACTTCTGATTTCTACCCTCAAGATACTCCCAGATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CCA 72 bp TTAATGAATGCTTCCATACTGCCGTTAAAGAGTTTATaGCTATACACTGAGAGAGGCCTAGGTCTCCTCATT +
Preference number: 3 (lower is better)
Translates to: LMNASILPLKSL*LYTERGLGLLI
Trigger: AATGAGGAGACCTAGGCCTCTCTCAGTGTATAGCCATAAACTCTTTAACGGCAGTATGGAAGCATTCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CCA 72 bp CAAACAACTAAATTGTTCCTGCAATTTGGCATTCATTaGCTGATTCATGCATGGCAAAGACCTGGACTCATG +
Preference number: 3 (lower is better)
Translates to: QTTKLFLQFGIH*LIHAWQRPGLM
Trigger: CATGAGTCCAGGTCTTTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR TCA 72 bp GGTAAACACCACTTCCCCTTGTACAATTGGTTATATTaGAGACTACTAACTAGGTTACTACATTTCCCCCAC +
Preference number: 3 (lower is better)
Translates to: GKHHFPLYNWLY*RLLTRLLHFPH
Trigger: GTGGGGGAAATGTAGTAACCTAGTTAGTAGTCTTCAATATAACCAATTGTACAAGGGGAAGTGGTGTTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCCTGCTGGACCGGTGCTaGACCACCGGCCGCACGGGC +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVLLDRC*TTGRTG
Trigger: GCCCGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAG...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCCCACGCCCGAGCTGCTaGTGCTGCTGGACCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSPRPSC*CCWTGA
Trigger: AGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGG...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCCGGCGCGGCCCATCCTaGAGGTCACATGGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSRRGPS*RSHGAR
Trigger: TCGGGCACCATGTGACCTGCAGGATGGGCCGCGCCG...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCTTTTGTGGGGGCTGCTaGGGCAGGCAGCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSFCGGC*GRQQPG
Trigger: CCCGGGCTGCTGCCTGCCCCAGCAGCCCCCACAAAA...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTTGGCGGGCTCCGAGCTaGCGGGGCCTGGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAWRAPS*RGLAGS
Trigger: AGAACCCGCCAGGCCCCGTCAGCTCGGAGCCCGCCA...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCTGGGGCCGGTCCTCGTaGCGGAGCAGGTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSWGRSS*RSRFML
Trigger: CAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCA...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGTGCCCACGCCCGAGCTaGTGCTGCTGCTGGACCGGT +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETCPRPS*CCCWTG
Trigger: ACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGGGCA...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTGGCTGGACGTGAGCTaGAGCCAGCGCCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGWLDVS*SQRPGL
Trigger: GAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCCTAGGCTGCTGTGCCTaGTGGAACCGCAGGTCGACC +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSLGCCA*WNRRST
Trigger: GGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAG...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCGGGCTGCTGAGCGCTaGCCTGGCAGACCTCATCCC +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKRAAER*PGRPHP
Trigger: GGGATGAGGTCTGCCAGGTCAGCGCTCAGCAGCCCG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCCATCTGGCGCCTGCTTaGCCGTGTTCTGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVHLAPA*PCSASR
Trigger: TCGAGAGGCAGAACACGGTCAAGCAGGCGCCAGATG...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCACCCTGGGCCGTGGTaGGCCACAGCGGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSHPGPW*ATAGHG
Trigger: GCCGTGGCCCGCTGTGGCTCACCACGGCCCAGGGTG...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGCCCCGCTTCGGCGTCTaGGGATGGCTGCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETPRFGV*GWLLHQ
Trigger: CTGATGGAGCAGCCATCCCCAGACGCCGAAGCGGGG...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCAGAGGCAGCCGACTTaGCGGACTCTGTCGATCGAC +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSQRQPT*RTLSID
Trigger: GTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCATCTGGCGCCTGCTTaGCCGTGTTCTGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSHLAPA*PCSASR
Trigger: TCGAGAGGCAGAACACGGTCAAGCAGGCGCCAGATG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCTGCTGCTGGACCGGTaGTGGACCACCGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPLLLDR*WTTGRT
Trigger: CGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAGCAG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAACAGAGCTGCGGCGCTaGGGCCGGTCCTCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQTELRR*GRSSCR
Trigger: CCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGT...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCCCCGCTTCGGCGTCTaGGGATGGCTGCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKPRFGV*GWLLHQ
Trigger: CTGATGGAGCAGCCATCCCCAGACGCCGAAGCGGGG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCGTGGTGTGTCTATGCTaGGGCCCAGGCCCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPVVCLC*GPGPGA
Trigger: CGCCCCGGGGCCTGGGCCCCAGCATAGACACACCAC...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGGGCTGCTGTGCCTGGTaGAACCGCAGGTCGACCTCA +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETGCCAW*NRRSTS
Trigger: TGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCC...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTCTGCTGGACCGGTGCTaGACCACCGGCCGCACGGGC +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRLLDRC*TTGRTG
Trigger: GCCCGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAG...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCCTTTGGCCTCCGGGTaGAAGGGCAGGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKPLASG*KGRVSG
Trigger: CCCAGAGACCCTGCCCTTCCACCCGGAGGCCAAAGG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGGCCCCAGTCTGAACTaGGCGCTCACGGCTCATGCG +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKGPSLN*ALTAHA
Trigger: CGCATGAGCCGTGAGCGCCCAGTTCAGACTGGGGCC...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCGTAGGGAAAAGCCCCTaGGTCTCGCAGGAGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVVGKSP*VSQERV
Trigger: TACCCTCTCCTGCGAGACCCAGGGGCTTTTCCCTAC...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCTCTCCCGCCGGGTCTaGTGCAGAACCAGATACCAA +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSLSRRV*CRTRYQ
Trigger: TTGGTATCTGGTTCTGCATCAGACCCGGCGGGAGAG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTACGGGCTGCTGAGCGCTaGCCTGGCAGACCTCATCCC +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLRAAER*PGRPHP
Trigger: GGGATGAGGTCTGCCAGGTCAGCGCTCAGCAGCCCG...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCGGATGACGATGGTGTaGAGGGGACTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETARMTMV*RGLAGS
Trigger: GGAGCCCGCCAGTCCCCTTCACACCATCGTCATCCG...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTGTGGTCCCCTAGGCTaGTGTGCCTGGTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGCGPLG*CAWWNR
Trigger: GCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTTGGTCCTTCTTGAACTaGTGCTCCCGGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGWSFLN*CSRELR
Trigger: CCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGACCA...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCAGGATTTGTTGGATCTaGTGCACCCTCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSRICWI*CTLSAG
Trigger: CCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCT...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCTTGTCATCCAGCAATaGCCCACTGCTGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSLVIQQ*PTAGLA
Trigger: AGCGAGGCCAGCAGTGGGCCATTGCTGGATGACAAG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGTGCTGCTGCGGCGCATaGCGGCATCGGGGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERCCCGA*RHRGRG
Trigger: TCCGCGACCCCGATGCCGCCATGCGCCGCAGCAGCA...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTGCTGCTGCGGCGCATaGCGGCATCGGGGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDCCCGA*RHRGRG
Trigger: TCCGCGACCCCGATGCCGCCATGCGCCGCAGCAGCA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGTGGTCATCATCTCGGTaGAGGAGCTGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETWSSSR*RSCCCG
Trigger: GCCGCAGCAGCAGCTCCTCCACCGAGATGATGACCA...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCCACCAAGGCCACCCTaGGCCGTGGTGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPPPRPP*AVVSHS
Trigger: GCTGTGGCTCACCACGGCCCAGGGTGGCCTTGGTGG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCTGGGGTGGACGGGGGTaGGGATTTCCTATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSWGGRG*GFPMKG
Trigger: ACCCTTCATAGGAAATCCCCACCCCCGTCCACCCCA...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTAGGACTGCCCCTCCCTaGCCCCAGTCTGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETARTAPP*PQSELG
Trigger: GCCCAGTTCAGACTGGGGCCAGGGAGGGGCAGTCCT...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGGCGCGGCGCCTCTTTaGTCGTGCAGCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDGAAPL*SCSQPL
Trigger: CAGGGGCTGGCTGCACGACCAAAGAGGCGCCGCGCC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGGGGAGGAAGCCCCACTaGGTGAGTCCCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRGRKPH*VSPMAA
Trigger: AGCAGCCATGGGACTCACCCAGTGGGGCTTCCTCCC...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp TCTCGCCAACCTTCTCCCATGCCTTTGGGAGTACAGTaGGCCTTTGGCCTCCGGGTGGAAGGGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SRQPSPMPLGVQ*AFGLRVEGQGL
Trigger: GAGACCCTGCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGGCATGGGAGAAGGTTGGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTCGGGCTGCTGAGCGCTaGCCTGGCAGACCTCATCCC +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRRAAER*PGRPHP
Trigger: GGGATGAGGTCTGCCAGGTCAGCGCTCAGCAGCCCG...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGTCTTGTCAGGGTAGTTaGTGCTGCCAGCGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSCQGS*CCQRSR
Trigger: TCGGGAGCGCTGGCAGCATCAACTACCCTGACAAGA...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTTGGCGGGCTCCGAGCTaGCGGGGCCTGGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGWRAPS*RGLAGS
Trigger: AGAACCCGCCAGGCCCCGTCAGCTCGGAGCCCGCCA...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCATCCCATGGCTGGACGTaGGCTGCAGCCAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLASHGWT*AAASAR
Trigger: CCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGA...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGGGTGGGGATTTCCTATaGAGGGTTCCCCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETGGDFL*RVPHLW
Trigger: CCAGAGGTGGGGAACCCTTCATAGGAAATCCCCACC...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGGGGGACCCAAAGCTCTaGCTCATGCATTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMGDPKL*LMHSGG
Trigger: GCCCCCAGAATGCATGAGTCAGAGCTTTGGGTCCCC...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGACAAGGGTAGGAGCATaGGACTGGTGGTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMTRVGA*DWWWGR
Trigger: CCGTCCCCACCACCAGTCTCATGCTCCTACCCTTGT...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTATGGGGCCGGTCCTCGTaGCGGAGCAGGTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLWGRSS*RSRFML
Trigger: CAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCA...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGGGTGGTGCCGCATTCTaGTCTTTCCCCTTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRGGAAF*SFPFAQ
Trigger: CTGGGCGAAGGGGAAAGAGCAGAATGCGGCACCACC...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAACCATCCACGCCGTTGTaGCGGCCCTCCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQPSTPL*RPSHQS
Trigger: GGACTGGTGGGAGGGCCGGCACAACGGCGTGGATGG...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTTCCCCTAGGCTGCTGTaGCTGGTGGAACCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETASPRLL*LVEPQV
Trigger: GACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGA...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCACTCGTGCAGAGCCGTaGTCATGGTCTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSTRAEP*SWSSRC
Trigger: ACATCGAGAAGACCATGAGCACGGCTCTGCACGAGT...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTGGAGGAGCTGCTGCTaGGGCGCATGGCGGCATCGG +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRWRSCC*GAWRHR
Trigger: CCGATGCCGCCATGCGCCGCAGCAGCAGCTCCTCCA...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCCACGCCCGAGCTGCTaGTGCTGCTGGACCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERPRPSC*CCWTGA
Trigger: AGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGAACTGCTCCACCAGCTaGGTGCGGATCTCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMNCSTS*VRISAG
Trigger: GCCCGCAGAGATCCGCACGCAGCTGGTGGAGCAGTT...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCACAGAGCTGCGGCGCTaGGGCCGGTCCTCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLTELRR*GRSSCR
Trigger: CCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGAGGTGCGGGCCAGGCTaGCATGGAAGCCCAAATCAC +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKRCGPG*HGSPNH
Trigger: GTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTTCATCGATGGCCCCTaGCTCGCTGTGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGFIDGP*LAVWAV
Trigger: GACAGCCCACACAGCGAGCCAGGGGCCATCGATGAA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGTTCATCGATGGCCCCTaGCTCGCTGTGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMFIDGP*LAVWAV
Trigger: GACAGCCCACACAGCGAGCCAGGGGCCATCGATGAA...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTCCTCCGAGGCGCGGTaGTACAGGAGCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDSSEAR*YRSSEA
Trigger: GGCCTCGCTGCTCCTGTACCACCGCGCCTCGGAGGA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAATCCTCCGAGGCGCGGTaGTACAGGAGCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQSSEAR*YRSSEA
Trigger: GGCCTCGCTGCTCCTGTACCACCGCGCCTCGGAGGA...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTGCCTCCAGGGACTTGTaGTCCCCTAGGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAASRDL*SPRLLC
Trigger: GCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGGC...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGAGTACAGTTGGCCTTTaGCCTCCGGGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSTVGL*PPGGRA
Trigger: TGCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACT...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCGACTCCAAACTTCAGTaGCCTCGAGAGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVDSKLQ*PRERGS
Trigger: GCTTCCTCTCTCTCGAGGCCACTGAAGTTTGGAGTC...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTCTGGGGCTGGATGAGTaGGGAGACGTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGLGLDE*GDVCHL
Trigger: CAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAG...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCTTCTCTCGGCTCCCCTaGGCAGCTTTGGATATGTGG +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSFSRLP*AALDMW
Trigger: CCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAA...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTGGTTTCTGGAACGACTaGGCTGGTGGGAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGGFWND*AGGRLW
Trigger: CCACAACCTCCCACCAGCCCAGTCGTTCCAGAAACC...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp CACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTaGGATCTGGTGCACCCTCTCGGCTGGGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HNDHAGKGDEDL*DLVHPLGWVLQ
Trigger: CTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp GACCACAATGACCACGCGGGGAAGGGTGACGAGGATTaGTTGGATCTGGTGCACCCTCTCGGCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: DHNDHAGKGDED*LDLVHPLGWVL
Trigger: GAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCTCTTCATCGCTGGTATaGGGCTCAGTGCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSSSSLV*GSVPLS
Trigger: TGACAATGGCACTGAGCCTCATACCAGCGATGAAGA...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGCGAGGCCCCCTTCTTaGAGGATAGCTCACGCGGGG +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRARPPS*RIAHAG
Trigger: CCCCGCGTGAGCTATCCTTCAAGAAGGGGGCCTCGC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGCATCGGGGTCGCGGATaGCGATGGTGTGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKHRGRG*RWCEGD
Trigger: GTCCCCTTCACACCATCGTCATCCGCGACCCCGATG...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGCCCGACTTGTCCGCTaGGCTGTTGGGGAACATCTT +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKARLVR*AVGEHL
Trigger: AAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGC...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCCTGGCTGTCACACGTaGAGATCATGCACCCATTTC +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSPGCHT*RSCTHF
Trigger: GAAATGGGTGCATGATCTTCACGTGTGACAGCCAGG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCAGGGCTGGAGGGCTCTaGTCTAAGACTTACCTTACT +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVRAGGL*SKTYLT
Trigger: AGTAAGGTAAGTCTTAGATCAGAGCCCTCCAGCCCT...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCTAACCCCATGGTTGTaGGCCAGCCACTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSLTPWL*ASHSSF
Trigger: GAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCCGCGACTCTGATTGCTaGTCCAGACATTTGAACTGC +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSRDSDC*SRHLNC
Trigger: GCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCG...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTAGCTCCTCGTGCATCTaGAGGCCAATCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGSSSCI*RPISLL
Trigger: GAGCAAGGAGATTGGCCTGCAGATGCACGAGGAGCT...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCATTTGTTGGATCTGGTaGACCCTCTCGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSICWIW*TLSAGF
Trigger: GAACCCAGCCGAGAGGGTGCACCAGATCCAACAAAT...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGTGCCCATCAGGGATGTaGATGAGGGTAGGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRCPSGM*MRVGPK
Trigger: CTTCGGGCCTACCCTCATGCACATCCCTGATGGGCA...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCAGGACACAGGGTCCTaGCCATCAGGGATGTGCATG +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMQDTGS*PSGMCM
Trigger: CATGCACATCCCTGATGGGCAGGACCCTGTGTCCTG...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGCCATCCACGCCGTTGTaGCGGCCCTCCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWPSTPL*RPSHQS
Trigger: GGACTGGTGGGAGGGCCGGCACAACGGCGTGGATGG...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTACCACATCTGGCGCCTaGTTGACCGTGTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGTTSGA*LTVFCL
Trigger: GAGGCAGAACACGGTCAAGCAGGCGCCAGATGTGGT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTCCCAGACGGACCTCTaGCCTCCAAGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKSQTDL*PPRPGS
Trigger: TGACCCTGGCCTTGGAGGGCAGAGGTCCGTCTGGGA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGCTGCGTGCGGATCTCTaGGGGCACACAAGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMLRADL*GHTRVG
Trigger: TCCTACCCTTGTGTGCCCGCAGAGATCCGCACGCAG...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAACAGAGCTGCGGCGCTaGGGCCGGTCCTCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRTELRR*GRSSCR
Trigger: CCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGT...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCCCTGGCTCGCTGTGTaGGCTGTCACAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSPWLAV*AVTIFF
Trigger: GAAGAATATTGTGACAGCCCACACAGCGAGCCAGGG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTCTTGTCATCCAGCAATaGCCCACTGCTGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGLVIQQ*PTAGLA
Trigger: AGCGAGGCCAGCAGTGGGCCATTGCTGGATGACAAG...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGCGAGCTGACGGGGCCTaGCGGGTTCTTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWRADGA*RVLQGL
Trigger: GAGCCCCTGAAGAACCCGCCAGGCCCCGTCAGCTCG...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCTCGGTGGGAGATGTTTaGTGGCATGGATCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVSVGDV*WHGSEV
Trigger: TACCTCAGATCCATGCCACCAAACATCTCCCACCGA...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTGCAGCGATGGCCATGTaGCCAGTCCCAGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTAAMAM*PVPEGQ
Trigger: CTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGC...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTAACAAGGGGCAGCGATaGCCATGTGGCCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETANKGQR*PCGQSQ
Trigger: CTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTT...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGCCGGGAACAAGGGCCTaGGCAGAAACCCTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKPGTRA*AETLAR
Trigger: CCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGG...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTGCTGGTGGGAGGTTGTaGTGTCCTCTCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGAGGRL*CPLSFS
Trigger: GGAAAAGGAGAGAGGACACCACAACCTCCCACCAGC...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGGAACGACTGGGCTGGTaGGAGGTTGTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRERLGW*EVVVSS
Trigger: AGAGGACACCACAACCTCCCACCAGCCCAGTCGTTC...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGGGAGGCAGCACTTTCTaGGGGGTGGTTCTTATGGGG +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMGGSTF*GVVLMG
Trigger: CCCCATAAGAACCACCCCCCAGAAAGTGCTGCCTCC...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCCATGCTGAGGTCTCCTaGCTTATTGAACTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVHAEVS*LIELLL
Trigger: GAGAAGCAGTTCAATAAGTCAGGAGACCTCAGCATG...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCCACGCGGGGAAGGGTaGCGAGGATTTGTTGGATCT +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAPRGEG*RGFVGS
Trigger: AGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGG...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCATCGGGGTCGCGGATaGCGATGGTGTGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSHRGRG*RWCEGD
Trigger: GTCCCCTTCACACCATCGTCATCCGCGACCCCGATG...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCTCCCATGGCTGGACGTaGGCTGCAGCCAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRISHGWT*AAASAR
Trigger: CCGGGCGCTGGCTGCAGCTCACGTCCAGCCATGGGA...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAACCTCTGGTCGTCTGTTaGCACGCGAGAGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQPLVVC*HARGPW
Trigger: CCACGGACCTCTCGCGTGTCAACAGACGACCAGAGG...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTGAACGTCGATGGGACTaGGTGCTGTGGAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAERRWD*VLWRVS
Trigger: ACTCACCCTCCACAGCACTCAGTCCCATCGACGTTC...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCGGTTTCTCAGGAGAGTaGGGCATTTGCACTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSGFSGE*GICTSV
Trigger: CACACTAGTGCAAATGCCTCACTCTCCTGAGAAACC...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTGCTTCATCGCTGGTATaGGGCTCAGTGCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGASSLV*GSVPLS
Trigger: TGACAATGGCACTGAGCCTCATACCAGCGATGAAGC...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGAGCACAGTGACCCCTTaGCTGTCTCTGCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMSTVTP*LSLQLT
Trigger: AGTGAGCTGCAGAGACAGTCAAGGGGTCACTGTGCT...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGGTGCTCCCGGGAGCTaGGGATTTTGGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKGAPGS*GFWRRS
Trigger: GCTTCTCCTCCAAAATCCGCAGCTCCCGGGAGCACC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTTCAGGAGCTCCTCGTaGATCTGCAGGCCAATCTCC +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGFRSSS*ICRPIS
Trigger: GGAGATTGGCCTGCAGATGCACGAGGAGCTCCTGAA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAATCTTCTTCACAGAGCTaGGGCGCTGGGGCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQSSSQS*GAGAGP
Trigger: AGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGA...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAGATAGGTCCGGAAGGTaGGGGCCAGGCTGGCATGGA +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQDRSGR*GPGWHG
Trigger: TCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATC...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTGATAGGTCCGGAAGGTaGGGGCCAGGCTGGCATGGA +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSDRSGR*GPGWHG
Trigger: TCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATC...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTCCTTCGCCCAGGGTCTaGTTGAGTAAATCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGPSPRV*LSKSCL
Trigger: CAAGCACGATTTACTCAAGCAGACCCTGGGCGAAGG...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGTGTGGTCCCCTAGGCTaGTGTGCCTGGTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERCGPLG*CAWWNR
Trigger: GCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACA...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTCGGTGGAGGAGCTGCTaGTGCGGCGCATGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGRWRSC*CGAWRH
Trigger: ATGCCGCCATGCGCCGCAGCAGCAGCTCCTCCACCG...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCCGGTGGAGGAGCTGCTaGTGCGGCGCATGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLRWRSC*CGAWRH
Trigger: ATGCCGCCATGCGCCGCAGCAGCAGCTCCTCCACCG...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCCGCCCGAGCTGCTGCTaGTGCTGGACCGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLRPSCC*CWTGAG
Trigger: TCCAGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCG...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCCGGCGCGGCCCATCCTaGAGGTCACATGGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLRRGPS*RSHGAR
Trigger: TCGGGCACCATGTGACCTGCAGGATGGGCCGCGCCG...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCAATGTTCTATGTGGCTaGTCAGAGGAGAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSNVLCG*SEERRP
Trigger: GGGTCTCCTCTCCTCTGAGCAGCCACATAGAACATT...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCGCTCCACCAGCTGCGTaGGGATCTCTGCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACAPPAA*GSLRAH
Trigger: GTGTGCCCGCAGAGATCCGCACGCAGCTGGTGGAGC...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTCATTGAGGGTGGCATaGTCTCGGCTCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDSLRVA*SRLSRR
Trigger: CCGGCGGGAGAGCCGAGACCATGCCACCCTCAATGA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGAGGATTTGTTGGATCTaGTGCACCCTCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRRICWI*CTLSAG
Trigger: CCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCT...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGTGGTGTGTCTATGCTaGGGCCCAGGCCCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIVVCLC*GPGPGA
Trigger: CGCCCCGGGGCCTGGGCCCCAGCATAGACACACCAC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGGCTGCTGTGCCTGGTaGAACCGCAGGTCGACCTCA +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDGCCAW*NRRSTS
Trigger: TGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTTGGTCATCATCTCGGTaGAGGAGCTGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTWSSSR*RSCCCG
Trigger: GCCGCAGCAGCAGCTCCTCCACCGAGATGATGACCA...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTCCGTGGGATTCCCATaGCTGGACGTGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKSVGFP*LDVSCS
Trigger: GCTGCAGCTCACGTCCAGCCATGGGAATCCCACGGA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGAGGGGCAGACTGTTCTaGAAGGCCACGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKRGRLF*KATTSG
Trigger: TCCAGAAGTCGTGGCCTTCCAGAACAGTCTGCCCCT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGCCTTTGGCCTCCGGGTaGAAGGGCAGGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWPLASG*KGRVSG
Trigger: CCCAGAGACCCTGCCCTTCCACCCGGAGGCCAAAGG...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCTTTGGGAGTACAGTTaGCCTTTGGCCTCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETALWEYS*PLASGW
Trigger: CCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAG...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCTAAGTGCTCAGGGCTaGGACTCAGACTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETALSAQG*DSDSGP
Trigger: AGGCCCAGAGTCTGAGTCCCAGCCCTGAGCACTTAG...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTCTTTACCCTGAGAAGTaGGAGGCAGCACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGLYPEK*EAALSG
Trigger: CCCAGAAAGTGCTGCCTCCCACTTCTCAGGGTAAAG...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp AGTCAGGGGTCTTCTCGCCAACCTTCTCCCATGCCTTaGGGAGTACAGTTGGCCTTTGGCCTCCGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SQGSSRQPSPMP*GVQLAFGLRVE
Trigger: TTCCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGGCATGGGAGAAGGTTGGCGAGAAGACCCCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTGGTCTCCTGACTTATTaGACTGCTTCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGGLLTY*TASPPA
Trigger: AGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACC...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGCGCCCAGGGTCTGCTTaGGTAAATCGTGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLRPGSA*VNRAWP
Trigger: AGGCCAAGCACGATTTACTCAAGCAGACCCTGGGCG...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGAGATCCTGGCACTCTaGAGATCCCCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKEILAL*RSPAAG
Trigger: TCCAGCAGCAGGGGATCTTCAGAGTGCCAGGATCTC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTGCCCCACCCTTCCTTaGGGGGCAGACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDCPTLP*GADCSG
Trigger: TCCAGAACAGTCTGCCCCTCAAGGAAGGGTGGGGCA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTGAACGTCGATGGGACTaGGTGCTGTGGAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTERRWD*VLWRVS
Trigger: ACTCACCCTCCACAGCACTCAGTCCCATCGACGTTC...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGATGGCTCTAGTAGCTTaGCCTGGTCAGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKMALVA*PGQLLL
Trigger: CAAGAGGAGCTGACCAGGGCAAGCTACTAGAGCCAT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGGTGCTCCCGGGAGCTaGGGATTTTGGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDGAPGS*GFWRRS
Trigger: GCTTCTCCTCCAAAATCCGCAGCTCCCGGGAGCACC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACGATAGGTCCGGAAGGTaGGGGCCAGGCTGGCATGGA +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHDRSGR*GPGWHG
Trigger: TCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATC...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCCTGAAGATCCCCTGCTaGTGGAGTCCATATAAATTG +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVLKIPC*WSPYKL
Trigger: CAATTTATATGGACTCCAGCAGCAGGGGATCTTCAG...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGTCGACCTCATCGAGTaGCCTTCGGAGAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRVDLIE*PSESAF
Trigger: GAAGGCGCTCTCCGAAGGGCACTCGATGAGGTCGAC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCCTTCTCGATGTCTTCTaGCAGGGCCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFLLDVF*QGLGLQ
Trigger: CTGGAGGCCGAGGCCCTGGCAGAAGACATCGAGAAG...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGCGCCCGAGCTGCTGCTaGTGCTGGACCGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRRPSCC*CWTGAG
Trigger: TCCAGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCG...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTTGCAGCTCACTATTCTaGCACTGTTTGGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGCSSLF*HCLARD
Trigger: ATCCCTGGCCAAACAGTGGCAGAATAGTGAGCTGCA...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGTTCAGCCTCCTGAGTTaGTGGGACCACAGGCATATG +
Preference number: 4 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRFSLLS*WDHRHM
Trigger: CATATGCCTGTGGTCCCAGCAACTCAGGAGGCTGAA...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGCTGTGTAGAGCTCATTaGTCACCTTCAGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETLCRAH*SPSGAP
Trigger: AGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAG...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTAGGTGCGGGCCAGGCTaGCATGGAAGCCCAAATCAC +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSRCGPG*HGSPNH
Trigger: GTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCT...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTTCATTGATGTGTGCCTaGCAGGACACAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETASLMCA*QDTGSC
Trigger: GCAGGACCCTGTGTCCTGCCAGGCACACATCAATGA...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCGGTCAACTTCATCGATaGCCCCTGGCTCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPGQLHR*PLARCV
Trigger: CACACAGCGAGCCAGGGGCCATCGATGAAGTTGACC...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTAGGTCAACTTCATCGATaGCCCCTGGCTCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLGQLHR*PLARCV
Trigger: CACACAGCGAGCCAGGGGCCATCGATGAAGTTGACC...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCACTGGAGGTCGTTTTTaGAAGAGGCCTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSTGGRF*KRPCHP
Trigger: TGGATGACAAGGCCTCTTCCAAAAACGACCTCCAGT...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCAGGCAGCAGCCCGGGGTaGTGTGTCTATGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSGSSPG*CVYAGA
Trigger: GGCCCCAGCATAGACACACCACCCCGGGCTGCTGCC...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGGAACATCTTCTCGGTaGGCGTCACGGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGGTSSR*ASRPGC
Trigger: GCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTCCGTGGGATTCCCATaGCTGGACGTGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDSVGFP*LDVSCS
Trigger: GCTGCAGCTCACGTCCAGCCATGGGAATCCCACGGA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCACACGCGAGAGGTCCGTaGGATTCCCATGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAHARGP*DSHGWT
Trigger: CGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTG...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCACCAAATAACTCGGTaGGAGATGTTTGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSHQITR*EMFGGM
Trigger: CATGCCACCAAACATCTCCCACCGAGTTATTTGGTG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCGTAGGGAAAAGCCCCTaGGTCTCGCAGGAGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPVGKSP*VSQERV
Trigger: TACCCTCTCCTGCGAGACCCAGGGGCTTTTCCCTAC...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCTGGGGCTGGATGAGTaGGGAGACGTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERLGLDE*GDVCHL
Trigger: CAGATGGCAGACGTCTCCCCACTCATCCAGCCCCAG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGTTCTGCCTTTCCTCCTaGCCGCCACCCCGACTCCCA +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWFCLSS*PPPRLP
Trigger: TGGGAGTCGGGGTGGCGGCCAGGAGGAAAGGCAGAA...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCATTCTGCCTTTCCTCCTaGCCGCCACCCCGACTCCCA +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAFCLSS*PPPRLP
Trigger: TGGGAGTCGGGGTGGCGGCCAGGAGGAAAGGCAGAA...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCGAACAGCTTTGTTATTaGCCGGGGACAACTCACACA +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSEQLCY*PGTTHT
Trigger: TGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTC...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGCCAGGAGAGCGAGATaGAAGTTTTCCTGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKARRAR*KFSCCN
Trigger: GTTGCAGCAGGAAAACTTCCATCTCGCTCTCCTGGC...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
3UTR CAA 72 bp CCGCATTCTGCTCTTTCCCCTTCGCCCAGGGTCTGCTaGAGTAAATCGTGCTTGGCCTGCAGCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: PHSALSPSPRVC*SKSCLACSLVM
Trigger: CATCACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCAGACCCTGGGCGAAGGGGAAAGAGCAGAATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCAGGTTGTATTCAGCTaGGAGATAGGTCCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKQVVFS*EIGPEG
Trigger: ACCTTCCGGACCTATCTCTCAGCTGAATACAACCTG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCCAGAGGCAGCCGACTTaGCGGACTCTGTCGATCGAC +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACQRQPT*RTLSID
Trigger: GTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTG...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCGCCCAGGGTCTGCTTaGGTAAATCGTGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERRPGSA*VNRAWP
Trigger: AGGCCAAGCACGATTTACTCAAGCAGACCCTGGGCG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATCCACGCGGGGAAGGGTaGCGAGGATTTGTTGGATCT +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDPRGEG*RGFVGS
Trigger: AGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGG...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGTCTTGTCAGGGTAGTTaGTGCTGCCAGCGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERSCQGS*CCQRSR
Trigger: TCGGGAGCGCTGGCAGCATCAACTACCCTGACAAGA...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACCGGATGACGATGGTGTaGAGGGGACTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDRMTMV*RGLAGS
Trigger: GGAGCCCGCCAGTCCCCTTCACACCATCGTCATCCG...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATCACCCTGGGCCGTGGTaGGCCACAGCGGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYHPGPW*ATAGHG
Trigger: GCCGTGGCCCGCTGTGGCTCACCACGGCCCAGGGTG...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCGGTGCAAAGATTTGGTaGGTGGCATTGGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSGAKIW*VALAKI
Trigger: AATTTTAGCCAATGCCACTCACCAAATCTTTGCACC...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCACATTCGTGCCTCCTaGATGACAGAGAAATATACC +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSHIRAS*MTEKYT
Trigger: GGTATATTTCTCTGTCATTCAGGAGGCACGAATGTG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGAGCCTTCAGGGAACATaGAACTGGCTCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMSLQGT*NWLSQT
Trigger: AGTCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCT...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCTCCAGACATTTGAACTaGTCCACCAGCTGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPSRHLN*STSCVR
Trigger: CCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGA...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTCGCGACTCTGATTGCTaGTCCAGACATTTGAACTGC +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGRDSDC*SRHLNC
Trigger: GCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCG...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGAGTCGCGACTCTGATTaGTGCTCCAGACATTTGAAC +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSRDSD*CSRHLN
Trigger: GTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACT...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTATCCTTCTTGAACTGGTaGTCCCGGGAGCTGCGGATT +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLSFLNW*SRELRI
Trigger: AATCCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGA...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCTTCAGGAGCTCCTCGTaGATCTGCAGGCCAATCTCC +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPFRSSS*ICRPIS
Trigger: GGAGATTGGCCTGCAGATGCACGAGGAGCTCCTGAA...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCTCTTCTTCACAGAGCTaGGGCGCTGGGGCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLSSSQS*GAGAGP
Trigger: AGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGA...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTCATTCCGGGCCTTTGTaGATTTCAGCTTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGHSGPL*ISACSQ
Trigger: CTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATG...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGGTGGTGCCGCATTCTaGTCTTTCCCCTTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAGGAAF*SFPFAQ
Trigger: CTGGGCGAAGGGGAAAGAGCAGAATGCGGCACCACC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGATTTGTTGGATCTGGTaGACCCTCTCGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMICWIW*TLSAGF
Trigger: GAACCCAGCCGAGAGGGTGCACCAGATCCAACAAAT...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTACTCGTGCAGAGCCGTaGTCATGGTCTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETATRAEP*SWSSRC
Trigger: ACATCGAGAAGACCATGAGCACGGCTCTGCACGAGT...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTAGTTCCCGCAACTCGTaGAGAGCCGTGCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRSSRNS*RAVLMV
Trigger: GACCATGAGCACGGCTCTGCACGAGTTGCGGGAACT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTTGCTTGACCGTGTTCTaGCTCTCGAGTTCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTCLTVF*LSSSRN
Trigger: GTTGCGGGAACTCGAGAGGCAGAACACGGTCAAGCA...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTGCTTGACCGTGTTCTaGCTCTCGAGTTCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKCLTVF*LSSSRN
Trigger: GTTGCGGGAACTCGAGAGGCAGAACACGGTCAAGCA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTGGAGGAGCTGCTGCTaGGGCGCATGGCGGCATCGG +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANWRSCC*GAWRHR
Trigger: CCGATGCCGCCATGCGCCGCAGCAGCAGCTCCTCCA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGCTGCAGGTCACATGGTaGCCGACTTGTCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWLQVTW*PTCPLS
Trigger: GCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAG...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTGGCTCATGCGTTTCATaGAAGACGGCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTGSCVS*KTAPAT
Trigger: TGTGGCTGGTGCCGTCTTGCATGAAACGCATGAGCC...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCGGCGCTCACGGCTCATaGGTTTCATGCAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFGAHGS*VSCKTA
Trigger: TGCCGTCTTGCATGAAACGCATGAGCCGTGAGCGCC...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGAAAGTGCCAAGGACTaGCCCTCCCTGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGESAKD*PSLAPV
Trigger: GACTGGGGCCAGGGAGGGGCAGTCCTTGGCACTTTC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGAGTCCTCCACATTCGTaGCTCCTGAATGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSPPHS*LLNDRE
Trigger: TTCTCTGTCATTCAGGAGGCACGAATGTGGAGGACT...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGGCGCCTCTTTGGTCGTaGAGCCAGCCCCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRAPLWS*SQPLAC
Trigger: GCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGCGC...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR GCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTAACAATCATGGCTCACTaGAGCCTCAACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLTIMAH*SLNLPG
Trigger: CCCAGGGAGGTTGAGGCTGCAGTGAGCCATGATTGT...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGGGGAGCTGCGGATTTTaGAGGAGAAGCGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERGSCGF*RRSAQP
Trigger: TGGCTGAGCGCTTCTCCTCCAAAATCCGCAGCTCCC...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGGGCGAGAGGAGGTACTaGTCCTTCTTGAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLGERRY*SFLNWC
Trigger: GCACCAGTTCAAGAAGGACCAGTACCTCCTCTCGCC...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATATCATTGAGGGTGGCATaGTCTCGGCTCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQISLRVA*SRLSRR
Trigger: CCGGCGGGAGAGCCGAGACCATGCCACCCTCAATGA...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCAGGTGCGGGCCAGGCTaGCATGGAAGCCCAAATCAC +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACRCGPG*HGSPNH
Trigger: GTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCT...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTGCTTGTCCTGAATCCTaGTTCCTGGTTCGAGCATTT +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGACPES*FLVRAF
Trigger: AAATGCTCGAACCAGGAACCAGGATTCAGGACAAGC...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTAGGATTTGTTGGATCTaGTGCACCCTCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTRICWI*CTLSAG
Trigger: CCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCT...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCTATACTGGGAGAGGTaGTTGAGGAAAGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMLYWER*LRKAKR
Trigger: CCTCTTCGCTTTCCTCAACCACCTCTCCCAGTATAG...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCTAGCTCCCGGGGGCTaGGGAAGATGGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERLAPGG*GRWLHD
Trigger: ATCATGAAGCCATCTTCCCCAGCCCCCGGGAGCTAG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCTTCGGCGTCTGGGGATaGCTGCTCCATCAGATCGTA +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPFGVWG*LLHQIV
Trigger: TACGATCTGATGGAGCAGCCATCCCCAGACGCCGAA...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGGCAGCAGCCCGGGGTaGTGTGTCTATGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNGSSPG*CVYAGA
Trigger: GGCCCCAGCATAGACACACCACCCCGGGCTGCTGCC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTTTTGTGGGGGCTGCTaGGGCAGGCAGCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANFCGGC*GRQQPG
Trigger: CCCGGGCTGCTGCCTGCCCCAGCAGCCCCCACAAAA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTGCAGAGCCGTGCTCATaGTCTTCTCGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAAEPCS*SSRCLL
Trigger: CAGAAGACATCGAGAAGACCATGAGCACGGCTCTGC...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACCGAGCTGACGGGGCCTaGCGGGTTCTTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANRADGA*RVLQGL
Trigger: GAGCCCCTGAAGAACCCGCCAGGCCCCGTCAGCTCG...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTGGAACATCTTCTCGGTaGGCGTCACGGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFGTSSR*ASRPGC
Trigger: GCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCC...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTATCCTGCAGGTCACATaGTGCCCGACTTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRILQVT*CPTCPL
Trigger: CAGCGGACAAGTCGGGCACCATGTGACCTGCAGGAT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACCCACCAAGGCCACCCTaGGCCGTGGTGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANPPRPP*AVVSHS
Trigger: GCTGTGGCTCACCACGGCCCAGGGTGGCCTTGGTGG...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCAGGCCCCAGTCTGAACTaGGCGCTCACGGCTCATGCG +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSGPSLN*ALTAHA
Trigger: CGCATGAGCCGTGAGCGCCCAGTTCAGACTGGGGCC...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTAAGTGCTCAGGGCTaGGACTCAGACTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSLSAQG*DSDSGP
Trigger: AGGCCCAGAGTCTGAGTCCCAGCCCTGAGCACTTAG...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTGCTCCCTTCCACTGTaGGGTGTCAAGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKCSLPL*GVKSSP
Trigger: AGGACTGGACTTGACACCCCACAGTGGAAGGGAGCA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGTGTGCTCCAAGCAGATaGCCTTTCATATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKCAPSR*PFISRS
Trigger: GCTCCTGGATATGAAAGGCCATCTGCTTGGAGCACA...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTGGCCCCTTCCCACACTaGTTCCTCTTTGTGTACCAC +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTGPFPH*FLFVYH
Trigger: GTGGTACACAAAGAGGAACCAGTGTGGGAAGGGGCC...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCGGGACAGCAGGACACTaGCAGATCAATCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPGTAGH*QINLRE
Trigger: CTCCCTGAGATTGATCTGCCAGTGTCCTGCTGTCCC...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTGCTCTGCTAAGTCGATaGTCAGGTTGCCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTALLSR*SGCQRA
Trigger: GGCCCTTTGGCAACCTGACCATCGACTTAGCAGAGC...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGACCTTTGAGGCCTGCTaGATTCCATTCATACCGGGT +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMTFEAC*IPFIPG
Trigger: ACCCGGTATGAATGGAATCCAGCAGGCCTCAAAGGT...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp CAGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGCTTaGGATATGTGGGGAATGTTCTATGTGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QQSPFSRLPWAA*DMWGMFYVAAQ
Trigger: CTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAAGGGACTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCTGCAGTCGCGACTCTaGTTGCTGCTCCAGACATTT +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPLQSRL*LLLQTF
Trigger: AAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCACTCTCCCGCCGGGTCTaGTGCAGAACCAGATACCAA +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLALSRRV*CRTRYQ
Trigger: TTGGTATCTGGTTCTGCATCAGACCCGGCGGGAGAG...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCATGCTGAGGTCTCCTaGCTTATTGAACTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKHAEVS*LIELLL
Trigger: GAGAAGCAGTTCAATAAGTCAGGAGACCTCAGCATG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGTCCTCTTGGCAATGTTaGTCTTGCTCATGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSSWQC*SCSCRS
Trigger: AGACCTACATGAGCAAGATCAACATTGCCAAGAGGA...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGAGATCCTGGCACTCTaGAGATCCCCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAEILAL*RSPAAG
Trigger: TCCAGCAGCAGGGGATCTTCAGAGTGCCAGGATCTC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACGAGATCCTGGCACTCTaGAGATCCCCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHEILAL*RSPAAG
Trigger: TCCAGCAGCAGGGGATCTTCAGAGTGCCAGGATCTC...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTACTGGGAGAGGTGGTTaGGGAAAGCGAAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTTGRGG*GKRRGI
Trigger: GATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGT...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGGCGAGGCCCCCTTCTTaGAGGATAGCTCACGCGGGG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKARPPS*RIAHAG
Trigger: CCCCGCGTGAGCTATCCTTCAAGAAGGGGGCCTCGC...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCTTGGTGGCATGGATCTaGGGTAAATCTAAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSLVAWI*GKSKFH
Trigger: ATGAAACTTAGATTTACCTCAGATCCATGCCACCAA...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCTTGGTGGCATGGATCTaGGGTAAATCTAAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GAAGAPALLWSSVDTREVLVAWI*GKSKFH
Trigger: ATGAAACTTAGATTTACCTCAGATCCATGCCACCAA...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTATGCATAGTGCCAGATaGGGAAGTGGGAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTMHSAR*GSGNRG
Trigger: TCCCCTGTTCCCACTTCCTCATCTGGCACTATGCAT...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCTCTTTAGTGGCAGCTaGGCCACAAGGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERLFSGS*ATRPRK
Trigger: TTTCCTGGGCCTTGTGGCTCAGCTGCCACTAAAGAG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGGTTCTCTGCCTGATTTaGCCTTTGAGGCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLVLCLI*PLRPAG
Trigger: TCCAGCAGGCCTCAAAGGTCAAATCAGGCAGAGAAC...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTTTGGCATTCATTGGCTaGTTCATGCATGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGLAFIG*FMHGKD
Trigger: GTCTTTGCCATGCATGAATCAGCCAATGAATGCCAA...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCTCCAGACATTTGAACTaGTCCACCAGCTGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFSRHLN*STSCVR
Trigger: CCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGA...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAGGTGCTCCCGGGAGCTaGGGATTTTGGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIGAPGS*GFWRRS
Trigger: GCTTCTCCTCCAAAATCCGCAGCTCCCGGGAGCACC...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATTGGGGCCGGTCCTCGTaGCGGAGCAGGTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNWGRSS*RSRFML
Trigger: CAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCA...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGATCTTCTTCACAGAGCTaGGGCGCTGGGGCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRSSSQS*GAGAGP
Trigger: AGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGA...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGACTTCATTGATGTGTaGCTGGCAGGACACAGGGTC +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKDFIDV*LAGHRV
Trigger: GACCCTGTGTCCTGCCAGGCACACATCAATGAAGTC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGCCAGCAATGGCCCACTaGTGGCCTCGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRPAMAH*WPRCQP
Trigger: AGGCTGACAGCGAGGCCAGCAGTGGGCCATTGCTGG...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACCCAGCAATGGCCCACTaGTGGCCTCGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDPAMAH*WPRCQP
Trigger: AGGCTGACAGCGAGGCCAGCAGTGGGCCATTGCTGG...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCTCCCCTAGGCTGCTGTaGCTGGTGGAACCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRISPRLL*LVEPQV
Trigger: GACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGA...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCCTGCTGCTGGACCGGTaGTGGACCACCGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCLLLDR*WTTGRT
Trigger: CGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAGCAG...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTCCATGTTAGGGAATaGTGTGGTTGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSLHVRE*CGWGCW
Trigger: CCAGCAGCCCCAACCACAGCATTCCCTAACATGGAG...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAACTCCATGTTAGGGAATaGTGTGGTTGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQLHVRE*CGWGCW
Trigger: CCAGCAGCCCCAACCACAGCATTCCCTAACATGGAG...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTGAAAGTGCCAAGGACTaGCCCTCCCTGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFESAKD*PSLAPV
Trigger: GACTGGGGCCAGGGAGGGGCAGTCCTTGGCACTTTC...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCCAGATTGCTATATTTTaGCTGGGAGGCTACTGGATT +
Preference number: 4 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSQIAIF*LGGYWI
Trigger: AATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTG...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTGCAGTTGTGGCAGATTaGTATATTTTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGAVVAD*YILPGR
Trigger: CCTCCCAGGCAAAATATAGCAATCTGCCACAACTGC...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTTGGACATGCACTGAATaGCACATCACGACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAWTCTE*HITTRS
Trigger: TGACCTGGTCGTGATGTGGCATTCAGTGCATGTCCA...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAGTCGATGGTCAGGTTaGCAAAGGGCCGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERSRWSG*QRAGHL
Trigger: GAGATGACCGGCCCTTTGGCAACCTGACCATCGACT...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR GCA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGCAAAGCTCTGACTCATaGATTCTGGGGGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLQSSDS*ILGATV
Trigger: CACAGTGGCCCCCAGAATGCATGAGTCAGAGCTTTG...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTCTAGTAGCTTGCCCTaGTCAGCTCCTCTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGSSSLP*SAPLAK
Trigger: TTTTGCAAGAGGAGCTGACCAGGGCAAGCTACTAGA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCGGGAGCTGCGGATTTTaGAGGAGAAGCGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACGSCGF*RRSAQP
Trigger: TGGCTGAGCGCTTCTCCTCCAAAATCCGCAGCTCCC...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGGCGAGAGGAGGTACTaGTCCTTCTTGAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRGERRY*SFLNWC
Trigger: GCACCAGTTCAAGAAGGACCAGTACCTCCTCTCGCC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTACATCCTCACTGATCTaGGAGAGGCGGACGATGACA +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTTSSLI*ERRTMT
Trigger: TGTCATCGTCCGCCTCTCCCAGATCAGTGAGGATGT...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGACATCCTCACTGATCTaGGAGAGGCGGACGATGACA +
Preference number: 4 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLTSSLI*ERRTMT
Trigger: TGTCATCGTCCGCCTCTCCCAGATCAGTGAGGATGT...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGACATCCAGCCCTTCGTaGCGAGAGGTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWTSSPS*REVSRL
Trigger: CAACCTGGAGACCTCTCGCCACGAAGGGCTGGATGT...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACACATCCAGCCCTTCGTaGCGAGAGGTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHTSSPS*REVSRL
Trigger: CAACCTGGAGACCTCTCGCCACGAAGGGCTGGATGT...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTGCTTGTCCTGAATCCTaGTTCCTGGTTCGAGCATTT +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGACPES*FLVRAF
Trigger: AAATGCTCGAACCAGGAACCAGGATTCAGGACAAGC...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360413.7
CDS-3UTR CCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTAGTGACGAGGATTTGTTaGATCTGGTGCACCCTCTCG +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLVTRIC*IWCTLS
Trigger: CGAGAGGGTGCACCAGATCCAACAAATCCTCGTCAC...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGGTCAACTTCATCGATaGCCCCTGGCTCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAGQLHR*PLARCV
Trigger: CACACAGCGAGCCAGGGGCCATCGATGAAGTTGACC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGTCGCTGTCAGCCTTCTaGCTCAGGCTGTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWSLSAF*LRLSEK
Trigger: CTTCTCCGACAGCCTGAGCCAGAAGGCTGACAGCGA...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTTCGGCGTCTGGGGATaGCTGCTCCATCAGATCGTA +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDFGVWG*LLHQIV
Trigger: TACGATCTGATGGAGCAGCCATCCCCAGACGCCGAA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACTAGGCTGCTGTGCCTaGTGGAACCGCAGGTCGACC +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSLGCCA*WNRRST
Trigger: GGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGCCTCCAGGGACTTGTaGTCCCCTAGGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIASRDL*SPRLLC
Trigger: GCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGGC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTGAAGGCCACGACTTCTaGAGACAGTGGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTEGHDF*RQWESV
Trigger: AACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTC...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACAGGACTGCCCCTCCCTaGCCCCAGTCTGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANRTAPP*PQSELG
Trigger: GCCCAGTTCAGACTGGGGCCAGGGAGGGGCAGTCCT...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCTATTACCCTATTTTATaGAGCAGAACAGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSYYPIL*SRTVRL
Trigger: GAGCCTGACTGTTCTGCTCCATAAAATAGGGTAATA...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCTAGGTCCCTCCCTTTaGGTGTATTTACCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKLGPSL*VYLPFR
Trigger: GCGAAAAGGTAAATACACCCAAAGGGAGGGACCTAG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAACTCTCTCCTGACCCCTaGCCTGGTGACTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQLSPDP*PGDFRE
Trigger: TTCTCTGAAGTCACCAGGCCAGGGGTCAGGAGAGAG...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGAGATCTCTGAACTGCTaGTTCCAGCCGATAGCCAAA +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKRSLNC*FQPIAK
Trigger: TTTGGCTATCGGCTGGAACCAGCAGTTCAGAGATCT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGGGGAATGTTCTATGTaGCTGCTCAGAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKGECSM*LLRGEE
Trigger: CTCCTCTCCTCTGAGCAGCCACATAGAACATTCCCC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACGCAGCGATGGCCATGTaGCCAGTCCCAGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDAAMAM*PVPEGQ
Trigger: CTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGC...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCAACAAGGGGCAGCGATaGCCATGTGGCCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLNKGQR*PCGQSQ
Trigger: CTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACCCGGGAACAAGGGCCTaGGCAGAAACCCTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDPGTRA*AETLAR
Trigger: CCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGG...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGCAGGACCTGGCCTATTaGCCATTAAGAGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMQDLAY*PLRVTR
Trigger: TCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGTTCTTGATGGGTTTCTaGAACGACTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLFLMGF*NDWAGG
Trigger: CCCACCAGCCCAGTCGTTCCAGAAACCCATCAAGAA...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTCAAATCAGGAGGTTCTaGTTGCCAATGACCAGTAAC +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGQIRRF*LPMTSN
Trigger: GTTACTGGTCATTGGCAACCAGAACCTCCTGATTTG...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGTGGCTGATTCATGCATaGCAAAGACCTGGACTCATG +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMWLIHA*QRPGLM
Trigger: CATGAGTCCAGGTCTTTGCCATGCATGAATCAGCCA...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGCAGTCGCGACTCTaGTTGCTGCTCCAGACATTT +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSLQSRL*LLLQTF
Trigger: AAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAG...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAAACTCCTGGAGGTCTTaGAGCAGCTGCAGTCGCGAC +
Preference number: 4 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQINSWRS*SSCSRD
Trigger: GTCGCGACTGCAGCTGCTTCAAGACCTCCAGGAGTT...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCAGAGGCAGCCGACTTaGCGGACTCTGTCGATCGAC +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIQRQPT*RTLSID
Trigger: GTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTCGCCCAGGGTCTGCTTaGGTAAATCGTGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGRPGSA*VNRAWP
Trigger: AGGCCAAGCACGATTTACTCAAGCAGACCCTGGGCG...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATACCACGCGGGGAAGGGTaGCGAGGATTTGTTGGATCT +
Preference number: 4 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIPRGEG*RGFVGS
Trigger: AGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGG...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCCTGGCTGTCACACGTaGAGATCATGCACCCATTTC +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERPGCHT*RSCTHF
Trigger: GAAATGGGTGCATGATCTTCACGTGTGACAGCCAGG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAGACTCTGGGCCTTTTaGCTCCAAACTTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERRLWAF*LQTSVA
Trigger: GGCCACTGAAGTTTGGAGTCAAAAGGCCCAGAGTCT...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCTTTTTGTTCCTCTCCTaGTGCTCCCTTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPFLFLS*CSLPLW
Trigger: CCACAGTGGAAGGGAGCATCAGGAGAGGAACAAAAA...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAATGCATAGTGCCAGATaGGGAAGTGGGAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQMHSAR*GSGNRG
Trigger: TCCCCTGTTCCCACTTCCTCATCTGGCACTATGCAT...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGGTTTCTCAGGAGAGTaGGGCATTTGCACTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKGFSGE*GICTSV
Trigger: CACACTAGTGCAAATGCCTCACTCTCCTGAGAAACC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTTGGTCTGATGTCCAGTaGGGATCAAAGCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSWSDVQ*GSKPGE
Trigger: CTCTCCTGGCTTTGATCCTCACTGGACATCAGACCA...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR TCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGTTTATGGCTATACACTaGGAGAGGCCTAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMFMAIH*ERPRSP
Trigger: AGGAGACCTAGGCCTCTCTCAGTGTATAGCCATAAA...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGGAAGCCCCACTGGGTaGGTCCCATGGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRGSPTG*VPWLLL
Trigger: AAGAAGCAGCCATGGGACTCACCCAGTGGGGCTTCC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCTCCAGACATTTGAACTaGTCCACCAGCTGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACSRHLN*STSCVR
Trigger: CCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGA...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGAGTCGCGACTCTGATTaGTGCTCCAGACATTTGAAC +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMSRDSD*CSRHLN
Trigger: GTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACT...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTGGTGGTGCCGCATTCTaGTCTTTCCCCTTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFGGAAF*SFPFAQ
Trigger: CTGGGCGAAGGGGAAAGAGCAGAATGCGGCACCACC...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAATTCTTCCTCTGGTGGTaGCGCATTCTGCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQFFLWW*RILLFP
Trigger: GGGAAAGAGCAGAATGCGGCACCACCAGAGGAAGAA...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360413.7
CDS-3UTR GCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATTCCCAGACGGACCTCTaGCCTCCAAGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNSQTDL*PPRPGS
Trigger: TGACCCTGGCCTTGGAGGGCAGAGGTCCGTCTGGGA...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATTGGCTGGACGTGAGCTaGAGCCAGCGCCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYWLDVS*SQRPGL
Trigger: GAGGCCCGGGCGCTGGCTGCAGCTCACGTCCAGCCA...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTTTTCCAGTGACGATATaGGGGAGAAGCCATGTGGTA +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAFPVTI*GRSHVV
Trigger: TACCACATGGCTTCTCCCGCATATCGTCACTGGAAA...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGTGTAAACAGTCACACTaGCGGGAACAAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWCKQSH*REQGPG
Trigger: CCCAGGCCCTTGTTCCCGGCAGTGTGACTGTTTACA...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCCTCCCTCCCTTCGGTaGCTCTGGTCTGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIPPSLR*LWSDVQ
Trigger: CTGGACATCAGACCAGAGGCACCGAAGGGAGGGAGG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTTGGTCCTTCTTGAACTaGTGCTCCCGGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFWSFLN*CSRELR
Trigger: CCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGACCA...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGGGCGAGAGGAGGTACTaGTCCTTCTTGAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWGERRY*SFLNWC
Trigger: GCACCAGTTCAAGAAGGACCAGTACCTCCTCTCGCC...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGCTGTGTAGAGCTCATTaGTCACCTTCAGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKLCRAH*SPSGAP
Trigger: AGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAG...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCTGAATCCTGGTTCCTaGTTCGAGCATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMLNPGS*FEHFFF
Trigger: GAAGAAGAAATGCTCGAACCAGGAACCAGGATTCAG...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATCCCTGGCTCGCTGTGTaGGCTGTCACAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDPWLAV*AVTIFF
Trigger: GAAGAATATTGTGACAGCCCACACAGCGAGCCAGGG...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGCAAGGCCAGGGTCACTaGGAAGCACGTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRQGQGH*EARGSH
Trigger: GTGGCTTCCACGTGCTTCCCAGTGACCCTGGCCTTG...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCGAAGGCCACGACTTCTaGAGACAGTGGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFEGHDF*RQWESV
Trigger: AACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTC...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAAACCTTTCATCCCTTaGGAATCCATCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGKPFIP*ESISLL
Trigger: CAGGAGAGAGATGGATTCCCAAGGGATGAAAGGTTT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAGGCCCCTTCCCACACTaGTTCCTCTTTGTGTACCAC +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAGPFPH*FLFVYH
Trigger: GTGGTACACAAAGAGGAACCAGTGTGGGAAGGGGCC...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTCCCCTGGGCAGCTTTaGATATGTGGGGAATGTTCT +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKSPGQL*ICGECS
Trigger: AGAACATTCCCCACATATCCAAAGCTGCCCAGGGGA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTACATTTATCATCACGTaGGGACAGGCAACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGTFIIT*GQATSN
Trigger: ATTGCTGGTTGCCTGTCCCCACGTGATGATAAATGT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGACATTTATCATCACGTaGGGACAGGCAACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKTFIIT*GQATSN
Trigger: ATTGCTGGTTGCCTGTCCCCACGTGATGATAAATGT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTCATCAGAGTCTTGGATaGCAAATGGGGAAAACATCA +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGHQSLG*QMGKTS
Trigger: TGATGTTTTCCCCATTTGCCATCCAAGACTCTGATG...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACACTGGAACGACTGGGCTaGTGGGAGGTTGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTLERLG*WEVVVS
Trigger: GGACACCACAACCTCCCACCAGCCCAGTCGTTCCAG...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp CCAAAGTCTAATTCCCAAGCTCGCAATTCCCTCCGATaGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGA +
Preference number: 4 (lower is better)
Translates to: PKSNSQARNSLR*CTLSGVQKALR
Trigger: TCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGAGGGAATTGCGAGCTTGGGAATTAGACTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTGCTGCTCCAGACATTTaGACTGCTCCACCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFAAPDI*TAPPAA
Trigger: CGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGC...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGCTGCTCCAGACATTTaGACTGCTCCACCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRAAPDI*TAPPAA
Trigger: CGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACCTGCAGTCGCGACTCTaGTTGCTGCTCCAGACATTT +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHLQSRL*LLLQTF
Trigger: AAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAG...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACAACTCCTGGAGGTCTTaGAGCAGCTGCAGTCGCGAC +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDNSWRS*SSCSRD
Trigger: GTCGCGACTGCAGCTGCTTCAAGACCTCCAGGAGTT...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGACTCTCCCGCCGGGTCTaGTGCAGAACCAGATACCAA +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRLSRRV*CRTRYQ
Trigger: TTGGTATCTGGTTCTGCATCAGACCCGGCGGGAGAG...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCTGGTGGCTGCCAGATTaGGCAAGTAGTCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLWWLPD*ASSHSG
Trigger: CCCGGAATGACTACTTGCTCAATCTGGCAGCCACCA...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGGGAGTCCATATAAATTaGTGTAACGGATGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMGVHIN*CNGCSS
Trigger: AGAGCTGCATCCGTTACATCAATTTATATGGACTCC...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTATATCTCGTTCATTTTaGTCGTCCACAAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAISRSF*SSTRGS
Trigger: AGACCCCCTTGTGGACGATCAAAATGAACGAGATAT...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTCTTCATCGCTGGTATaGGGCTCAGTGCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDSSSLV*GSVPLS
Trigger: TGACAATGGCACTGAGCCTCATACCAGCGATGAAGA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTGCCCGACTTGTCCGCTaGGCTGTTGGGGAACATCTT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFARLVR*AVGEHL
Trigger: AAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGC...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGGTGGGGATTTCCTATaGAGGGTTCCCCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIGGDFL*RVPHLW
Trigger: CCAGAGGTGGGGAACCCTTCATAGGAAATCCCCACC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCAAGGGAGGTCAAGTTTaGCACTGGCCTCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLKGGQV*HWPLPE
Trigger: CTCAGGGAGAGGCCAGTGTCAAACTTGACCTCCCTT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTGGTGCAAAGATTTGGTaGGTGGCATTGGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGGAKIW*VALAKI
Trigger: AATTTTAGCCAATGCCACTCACCAAATCTTTGCACC...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTCCGGGGAAGTTGACATaGAATGTCAGCATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTPGKLT*NVSISS
Trigger: AGAGCTAATGCTGACATTTCATGTCAACTTCCCCGG...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGTCTCTCAGAGTACTGTaGGAAACACCCCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRSLRVL*ETPQMK
Trigger: TTTCATTTGGGGTGTTTCTCACAGTACTCTGAGAGA...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATATGGCTGCTTCTTCGCTaGCCCAGCAAGCCCTATTCT +
Preference number: 4 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIWLLLR*PSKPYS
Trigger: AGAATAGGGCTTGCTGGGTCAGCGAAGAAGCAGCCA...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGATGGCTCTAGTAGCTTaGCCTGGTCAGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWMALVA*PGQLLL
Trigger: CAAGAGGAGCTGACCAGGGCAAGCTACTAGAGCCAT...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTAACTGCTCCACCAGCTaGGTGCGGATCTCTTTTATT +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTNCSTS*VRISFI
Trigger: AATAAAAGAGATCCGCACGCAGCTGGTGGAGCAGTT...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAATGCTTGAGTAAATCGTaGTTGGCCTGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQCLSKS*LACSLV
Trigger: CACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCA...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAATTTGTTGGATCTGGTaGACCCTCTCGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAICWIW*TLSAGF
Trigger: GAACCCAGCCGAGAGGGTGCACCAGATCCAACAAAT...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATGCCCATCAGGGATGTaGATGAGGGTAGGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSCPSGM*MRVGPK
Trigger: CTTCGGGCCTACCCTCATGCACATCCCTGATGGGCA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTCAGGACACAGGGTCCTaGCCATCAGGGATGTGCATG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFQDTGS*PSGMCM
Trigger: CATGCACATCCCTGATGGGCAGGACCCTGTGTCCTG...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACAGGACACAGGGTCCTaGCCATCAGGGATGTGCATG +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSQDTGS*PSGMCM
Trigger: CATGCACATCCCTGATGGGCAGGACCCTGTGTCCTG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAGCAATAGCCTCGATCTaGTCCACTTCTTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQAIASI*STSSSL
Trigger: CAGCGATGAAGAAGTGGAGCAGATCGAGGCTATTGC...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGCTTCTCGATGTCTTCTaGCAGGGCCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKLLDVF*QGLGLQ
Trigger: CTGGAGGCCGAGGCCCTGGCAGAAGACATCGAGAAG...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATTGCCCACGCCCGAGCTaGTGCTGCTGCTGGACCGGT +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYCPRPS*CCCWTG
Trigger: ACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGGGCA...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACCTGCAGGTCACATGGTaGCCGACTTGTCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANLQVTW*PTCPLS
Trigger: GCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAG...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCAGGTTAGTGGTATATTaGTTCATTCGCAGTTACTAT +
Preference number: 4 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSRLVVY*FIRSYY
Trigger: ATAGTAACTGCGAATGAAGCAATATACCACTAACCT...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCAATTCCCTCCGATTGTaGACTCTGTCCGGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFNSLRL*TLSGVQ
Trigger: TTGAACCCCGGACAGAGTGCACAATCGGAGGGAATT...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGGTGAGTCCCATGGCTaGTTCTTCGCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRGESHG*FFADPA
Trigger: TGCTGGGTCAGCGAAGAAGCAGCCATGGGACTCACC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACCCCCTTGACTGTCTCTaGAGCTCACTATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHPLDCL*SSLFCH
Trigger: GTGGCAGAATAGTGAGCTGCAGAGACAGTCAAGGGG...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GATGTGTGCCTGGCAGGACACAGGGTCCTGCCCATCAGGGATGTGCATGAGGGTCCTCATTTTAACCCATaGCATAATTTGCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: DVCLAGHRVLPIRDVHEGPHFNP*HNLLGA
Trigger: AGCACCAAGCAAATTATGGCATGGGTTAAAATGAGG...ACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGTCCATTCATACCGGGTaGTGTCAAGAGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMSIHTG*CQEQRR
Trigger: TCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGA...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGTCATTGGCTGATTCATaGATGGCAAAGACCTGGACT +
Preference number: 4 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMSLADS*MAKTWT
Trigger: AGTCCAGGTCTTTGCCATGCATGAATCAGCCAATGA...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGGGAGCTGCGGATTTTaGAGGAGAAGCGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIGSCGF*RRSAQP
Trigger: TGGCTGAGCGCTTCTCCTCCAAAATCCGCAGCTCCC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTGGTCCTTCTTGAACTaGTGCTCCCGGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANWSFLN*CSRELR
Trigger: CCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGACCA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAACCTGTAATGTCTGCATaGTGGCATCCAGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQPVMSA*WHPGFS
Trigger: GGAAAACCCTGGATGCCACCATGCAGACATTACAGG...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCGTCGATCGACTGTGTTaGAAGGCATCGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFVDRLC*KASETS
Trigger: TGATGTCTCCGATGCCTTCCAACACAGTCGATCGAC...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTTCTTCTTCCTCTGGTaGTGCCGCATTCTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GTRAWAETLARIYFRLRKFFFLW*CRILLF
Trigger: AAAGAGCAGAATGCGGCACCACCAGAGGAAGAAGAA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360413.7
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAAGATCCCCTGCTGCTaGAGTCCATATAAATTGATG +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGKIPCC*SPYKLM
Trigger: CATCAATTTATATGGACTCCAGCAGCAGGGGATCTT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGTGCACCCTCTCGGCTaGGTTCTCCAGTTTAATAGT +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDVHPLG*VLQFNS
Trigger: ACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCAC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTATACTGGGAGAGGTaGTTGAGGAAAGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSLYWER*LRKAKR
Trigger: CCTCTTCGCTTTCCTCAACCACCTCTCCCAGTATAG...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCTATACTGGGAGAGGTaGTTGAGGAAAGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERLYWER*LRKAKR
Trigger: CCTCTTCGCTTTCCTCAACCACCTCTCCCAGTATAG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGACTAGCTCCCGGGGGCTaGGGAAGATGGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRLAPGG*GRWLHD
Trigger: ATCATGAAGCCATCTTCCCCAGCCCCCGGGAGCTAG...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACCCCTGGCTCGCTGTGTaGGCTGTCACAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHPWLAV*AVTIFF
Trigger: GAAGAATATTGTGACAGCCCACACAGCGAGCCAGGG...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACTCGCTGTCAGCCTTCTaGCTCAGGCTGTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDSLSAF*LRLSEK
Trigger: CTTCTCCGACAGCCTGAGCCAGAAGGCTGACAGCGA...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACCCGAGATGTGCTCCGTaGGGGACTGGAGGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDPRCAP*GTGGRF
Trigger: AAAACGACCTCCAGTCCCCCACGGAGCACATCTCGG...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAATCGGTGGGAGATGTTTaGTGGCATGGATCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQSVGDV*WHGSEV
Trigger: TACCTCAGATCCATGCCACCAAACATCTCCCACCGA...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCACCAAATAACTCGGTaGGAGATGTTTGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPHQITR*EMFGGM
Trigger: CATGCCACCAAACATCTCCCACCGAGTTATTTGGTG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTTGGGGTGGACGGGGGTaGGGATTTCCTATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFWGGRG*GFPMKG
Trigger: ACCCTTCATAGGAAATCCCCACCCCCGTCCACCCCA...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCAAGTACAGTTGGCCTTTaGCCTCCGGGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSSTVGL*PPGGRA
Trigger: TGCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACT...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTCTTTGGGAGTACAGTTaGCCTTTGGCCTCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFLWEYS*PLASGW
Trigger: CCACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAG...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAATACTGTGCTACGATaGGGCTTAGGTTCTCACTAT +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGNTVLR*GLGSHY
Trigger: ATAGTGAGAACCTAAGCCCCATCGTAGCACAGTATT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCTGTGCTCCAAGCAGATaGCCTTTCATATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFCAPSR*PFISRS
Trigger: GCTCCTGGATATGAAAGGCCATCTGCTTGGAGCACA...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCAGATCTCTGAACTGCTaGTTCCAGCCGATAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPRSLNC*FQPIAK
Trigger: TTTGGCTATCGGCTGGAACCAGCAGTTCAGAGATCT...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGAGCAATTTCCTAGGGTaGTTTTGGTCTGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSNFLG*FWSVFP
Trigger: AGGAAAAACAGACCAAAACCACCCTAGGAAATTGCT...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTCGTGCAGCCAGCCCCTaGCTTGCTTTTGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFRAASP*LAFEGS
Trigger: AGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCACG...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCGAGGAGCTTCATCGCTaGTATGAGGCTCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACEELHR*YEAQCH
Trigger: ATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTC...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTATATTCTGCCACTGTTTaGCCAGGGATGGCAAGAATG +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLYSATV*PGMARM
Trigger: CATTCTTGCCATCCCTGGCCAAACAGTGGCAGAATA...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATAACTCCTGGAGGTCTTaGAGCAGCTGCAGTCGCGAC +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNNSWRS*SSCSRD
Trigger: GTCGCGACTGCAGCTGCTTCAAGACCTCCAGGAGTT...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATGGTGGCTGCCAGATTaGGCAAGTAGTCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSWWLPD*ASSHSG
Trigger: CCCGGAATGACTACTTGCTCAATCTGGCAGCCACCA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGATGGTGGCTGCCAGATTaGGCAAGTAGTCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRWWLPD*ASSHSG
Trigger: CCCGGAATGACTACTTGCTCAATCTGGCAGCCACCA...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCCAGGTTGTATTCAGCTaGGAGATAGGTCCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACQVVFS*EIGPEG
Trigger: ACCTTCCGGACCTATCTCTCAGCTGAATACAACCTG...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACGCTGGTGATAACGCATaGGCAGTTCTGTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDAGDNA*AVLSGR
Trigger: CCGTCCAGACAGAACTGCTCATGCGTTATCACCAGC...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTACTGGGAGAGGTGGTTaGGGAAAGCGAAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGTGRGG*GKRRGI
Trigger: GATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGT...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCATTTTTGTTCCTCTCCTaGTGCTCCCTTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAFLFLS*CSLPLW
Trigger: CCACAGTGGAAGGGAGCATCAGGAGAGGAACAAAAA...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGGCTGTGGAGGGTGAGTaGGACATGCATAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRAVEGE*DMHSAR
Trigger: TCTGGCACTATGCATGTCTCACTCACCCTCCACAGC...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACTCTTTAGTGGCAGCTaGGCCACAAGGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSLFSGS*ATRPRK
Trigger: TTTCCTGGGCCTTGTGGCTCAGCTGCCACTAAAGAG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTCACATTCGTGCCTCCTaGATGACAGAGAAATATACC +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTHIRAS*MTEKYT
Trigger: GGTATATTTCTCTGTCATTCAGGAGGCACGAATGTG...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCCCGGGGAAGTTGACATaGAATGTCAGCATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFPGKLT*NVSISS
Trigger: AGAGCTAATGCTGACATTTCATGTCAACTTCCCCGG...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTTTATGGCTATACACTaGGAGAGGCCTAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDFMAIH*ERPRSP
Trigger: AGGAGACCTAGGCCTCTCTCAGTGTATAGCCATAAA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR GCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGCTCCACCAGCTGCGTaGGGATCTCTTTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGAPPAA*GSLLFG
Trigger: CCCAAATAAAAGAGATCCGCACGCAGCTGGTGGAGC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCCGCGACTCTGATTGCTaGTCCAGACATTTGAACTGC +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACRDSDC*SRHLNC
Trigger: GCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCG...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTAGTCGCGACTCTGATTaGTGCTCCAGACATTTGAAC +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSSRDSD*CSRHLN
Trigger: GTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACT...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACTCCTTCTTGAACTGGTaGTCCCGGGAGCTGCGGATT +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDSFLNW*SRELRI
Trigger: AATCCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGA...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTTCCTTCTTGAACTGGTaGTCCCGGGAGCTGCGGATT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFSFLNW*SRELRI
Trigger: AATCCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGA...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATCATTCCGGGCCTTTGTaGATTTCAGCTTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDHSGPL*ISACSQ
Trigger: CTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATG...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCATGTCCATGACTGTGTaGTTGTCACTTCGGGAATCC +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFMSMTV*LSLRES
Trigger: GGATTCCCGAAGTGACAAGCACACAGTCATGGACAT...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCTGCTTGAGTAAATCGTaGTTGGCCTGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACCLSKS*LACSLV
Trigger: CACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCA...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTGCCCATCAGGGATGTaGATGAGGGTAGGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANCPSGM*MRVGPK
Trigger: CTTCGGGCCTACCCTCATGCACATCCCTGATGGGCA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATAGTTCCCGCAACTCGTaGAGAGCCGTGCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNSSRNS*RAVLMV
Trigger: GACCATGAGCACGGCTCTGCACGAGTTGCGGGAACT...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTGACTCAAAGCCTCCTTaGCTGTTTAGTTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETADSKPP*LFSSKS
Trigger: AGATTTGGAACTAAACAGGCAAGGAGGCTTTGAGTC...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGGCGCTCACGGCTCATaGGTTTCATGCAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNGAHGS*VSCKTA
Trigger: TGCCGTCTTGCATGAAACGCATGAGCCGTGAGCGCC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGTGGACATGCACTGAATaGCACATCACGACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWWTCTE*HITTRS
Trigger: TGACCTGGTCGTGATGTGGCATTCAGTGCATGTCCA...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTAGGACACTTTCCTGGCTaGAAATATCTCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLGHFPG*KYLSEY
Trigger: GTACTCTGAGAGATATTTGCAGCCAGGAAAGTGTCC...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCACATCCTCACTGATCTaGGAGAGGCGGACGATGACA +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLTSSLI*ERRTMT
Trigger: TGTCATCGTCCGCCTCTCCCAGATCAGTGAGGATGT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACCTGTGTAGAGCTCATTaGTCACCTTCAGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHLCRAH*SPSGAP
Trigger: AGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAG...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCGTGACGAGGATTTGTTaGATCTGGTGCACCCTCTCG +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLVTRIC*IWCTLS
Trigger: CGAGAGGGTGCACCAGATCCAACAAATCCTCGTCAC...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACATCATTGATGTGTGCCTaGCAGGACACAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTSLMCA*QDTGSC
Trigger: GCAGGACCCTGTGTCCTGCCAGGCACACATCAATGA...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGCTAGCTCCCGGGGGCTaGGGAAGATGGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKLAPGG*GRWLHD
Trigger: ATCATGAAGCCATCTTCCCCAGCCCCCGGGAGCTAG...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCTCAGTGCCATTGTCATaGTCAACTTCATCGATGGCC +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFSVPLS*STSSMA
Trigger: GGCCATCGATGAAGTTGACCATGACAATGGCACTGA...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTTCAGTGCCATTGTCATaGTCAACTTCATCGATGGCC +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSSVPLS*STSSMA
Trigger: GGCCATCGATGAAGTTGACCATGACAATGGCACTGA...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACGTCCAGCACCACATCTaGCGCCTGCTTGACCGTGTT +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANVQHHI*RLLDRV
Trigger: AACACGGTCAAGCAGGCGCCAGATGTGGTGCTGGAC...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGATCCTGCAGGTCACATaGTGCCCGACTTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKILQVT*CPTCPL
Trigger: CAGCGGACAAGTCGGGCACCATGTGACCTGCAGGAT...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCCACGCGAGAGGTCCGTaGGATTCCCATGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCHARGP*DSHGWT
Trigger: CGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTG...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTCAAGAGGCAAAGGCCTaGCTGTCACACGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGQEAKA*LSHVKI
Trigger: GATCTTCACGTGTGACAGCCAGGCCTTTGCCTCTTG...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACGGAAGGGCTTTACTTaGCCAAGAGGCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSRKGFT*PRGKGL
Trigger: CAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGGCCAGTGTCAAATCTTaGGCAGGTCACAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRASVKS*AGHSTA
Trigger: GGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGC...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTAGAAGTCTTGTGTCCTaGCTGGACAGTATAGCATCC +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRRSLVS*LDSIAS
Trigger: GGATGCTATACTGTCCAGCCAGGACACAAGACTTCT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACCTCTCTCCTGACCCCTaGCCTGGTGACTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDLSPDP*PGDFRE
Trigger: TTCTCTGAAGTCACCAGGCCAGGGGTCAGGAGAGAG...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGGGGAATGTTCTATGTaGCTGCTCAGAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGGECSM*LLRGEE
Trigger: CTCCTCTCCTCTGAGCAGCCACATAGAACATTCCCC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGGGGACAGCAGGACACTaGCAGATCAATCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRGTAGH*QINLRE
Trigger: CTCCCTGAGATTGATCTGCCAGTGTCCTGCTGTCCC...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAGAACAGCTTTGTTATTaGCCGGGGACAACTCACACA +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQEQLCY*PGTTHT
Trigger: TGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTC...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCTGCATGGCAAAGACCTaGACTCATGGTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACCMAKT*THGSLP
Trigger: AGGCAGAGAACCATGAGTCCAGGTCTTTGCCATGCA...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATACTGGTCTCGAATTCCTaGGCTCAAGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQILVSNS*AQVICP
Trigger: TGGGCAGATCACTTGAGCCCAGGAATTCGAGACCAG...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp TATCTAGGTGCCAGTGACTTAACTAGGTCCCTCCCTTaGGGTGTATTTACCTTTTCGCGGGGGACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: YLGASDLTRSLP*GVFTFSRGTRG
Trigger: TCCTCTGGTCCCCCGCGAAAAGGTAAATACACCCAAAGGGAGGGACCTAGTTAAGTCACTGGCACCTAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 72 bp CTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATaGGCCATTAAGAGTCACTCGACTTGTATCCACAGA +
Preference number: 4 (lower is better)
Translates to: LFHGPRLPGPGL*AIKSHSTCIHR
Trigger: TCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGGCTGGTGATAACGCATaGGCAGTTCTGTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKAGDNA*AVLSGR
Trigger: CCGTCCAGACAGAACTGCTCATGCGTTATCACCAGC...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCGGAGTCCATATAAATTaGTGTAACGGATGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPGVHIN*CNGCSS
Trigger: AGAGCTGCATCCGTTACATCAATTTATATGGACTCC...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCTGCCCCACCCTTCCTTaGGGGGCAGACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCCPTLP*GADCSG
Trigger: TCCAGAACAGTCTGCCCCTCAAGGAAGGGTGGGGCA...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCAGTGCATCACAGCCTaGTTTAAAATGAAAACGATG +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAQCITA*FKMKTM
Trigger: CATCGTTTTCATTTTAAATCAGGCTGTGATGCACTG...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCAGACTCTGGGCCTTTTaGCTCCAAACTTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIRLWAF*LQTSVA
Trigger: GGCCACTGAAGTTTGGAGTCAAAAGGCCCAGAGTCT...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACGCTGTGGAGGGTGAGTaGGACATGCATAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANAVEGE*DMHSAR
Trigger: TCTGGCACTATGCATGTCTCACTCACCCTCCACAGC...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGAAAGGCGCTTCGAGGTaGGAAATCGTTAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWKGASR*EIVSTE
Trigger: TTCAGTGCTAACGATTTCTCACCTCGAAGCGCCTTT...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCTTCGTGCCTCCTGAATaGCAGAGAAATATACCCAAC +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFFVPPE*QRNIPN
Trigger: GTTGGGTATATTTCTCTGTCATTCAGGAGGCACGAA...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAGAGAACCGGGGAAGTTaGCATGAAATGTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQENRGS*HEMSAL
Trigger: TAATGCTGACATTTCATGTCAACTTCCCCGGTTCTC...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGTCGGTGCCTCTGGTCTaGTGTCCAGTGAGGATCAAA +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRSVPLV*CPVRIK
Trigger: TTTGATCCTCACTGGACATCAGACCAGAGGCACCGA...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR TCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAGAGAAACACCCCAAATaGAACTGGGTATGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIEKHPK*NWVWGN
Trigger: GTTGCCCCATACCCAGTTTCATTTGGGGTGTTTCTC...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAAATAGAGGCCAGAGGTaGTGTGGCTTGCCTCAGATT +
Preference number: 4 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQINRGQR*CGLPQI
Trigger: AATCTGAGGCAAGCCACATCACCTCTGGCCTCTATT...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGGTTCTGGTTGCCAATaGCCAGTAACTGCCAATGCC +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRGSGCQ*PVTANA
Trigger: GGCATTGGCAGTTACTGGTCATTGGCAACCAGAACC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAATTCCTGGGCTCAAGTaGTCTGCCCACCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRIPGLK*SAHLNF
Trigger: GAAGTTGAGGTGGGCAGATCACTTGAGCCCAGGAAT...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGGCTCCACCAGCTGCGTaGGGATCTCTTTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRAPPAA*GSLLFG
Trigger: CCCAAATAAAAGAGATCCGCACGCAGCTGGTGGAGC...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGAGCTCCTCGTGCATCTaGAGGCCAATCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKSSSCI*RPISLL
Trigger: GAGCAAGGAGATTGGCCTGCAGATGCACGAGGAGCT...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGCATTCCGGGCCTTTGTaGATTTCAGCTTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWHSGPL*ISACSQ
Trigger: CTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATG...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCCTTCGCCCAGGGTCTaGTTGAGTAAATCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIPSPRV*LSKSCL
Trigger: CAAGCACGATTTACTCAAGCAGACCCTGGGCGAAGG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTCCTTCGCCCAGGGTCTaGTTGAGTAAATCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFPSPRV*LSKSCL
Trigger: CAAGCACGATTTACTCAAGCAGACCCTGGGCGAAGG...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATCTGAAGATCCCCTGCTaGTGGAGTCCATATAAATTG +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDLKIPC*WSPYKL
Trigger: CAATTTATATGGACTCCAGCAGCAGGGGATCTTCAG...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGACTTCATTGATGTGTaGCTGGCAGGACACAGGGTC +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRDFIDV*LAGHRV
Trigger: GACCCTGTGTCCTGCCAGGCACACATCAATGAAGTC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGCAATAGCCTCGATCTaGTCCACTTCTTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGAIASI*STSSSL
Trigger: CAGCGATGAAGAAGTGGAGCAGATCGAGGCTATTGC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTAGCCATGTGGTATTTTaGCTCCATGTTAGGGAATGC +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRSHVVF*LHVREC
Trigger: GCATTCCCTAACATGGAGGCAAAATACCACATGGCT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTGCCAACCTTCTCCCATaGCTTTGGGAGTACAGTTGG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFANLLP*LWEYSW
Trigger: CCAACTGTACTCCCAAAGGCATGGGAGAAGGTTGGC...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTCAGGGCACACAGATTTaGCCGTGTGCCATTATCCAG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFQGTQI*PCAIIQ
Trigger: CTGGATAATGGCACACGGGCAAATCTGTGTGCCCTG...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCCAGTGTACACAGCTTaGTCACTGATGTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERPVYTA*SLMFDL
Trigger: AAGGTCAAACATCAGTGAGCAAGCTGTGTACACTGG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTGGCAATATCTTTCTGTaGTCCAAGCAGATGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSGNIFL*SKQMAF
Trigger: AAAGGCCATCTGCTTGGAGCACAGAAAGATATTGCC...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCGGCAATATCTTTCTGTaGTCCAAGCAGATGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFGNIFL*SKQMAF
Trigger: AAAGGCCATCTGCTTGGAGCACAGAAAGATATTGCC...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACGGCAGATCTCTGAACTaGTGGTTCCAGCCGATAGCC +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANGRSLN*WFQPIA
Trigger: GGCTATCGGCTGGAACCAGCAGTTCAGAGATCTGCC...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGGGCAGATCTCTGAACTaGTGGTTCCAGCCGATAGCC +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKGRSLN*WFQPIA
Trigger: GGCTATCGGCTGGAACCAGCAGTTCAGAGATCTGCC...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATTGTAAACAGTCACACTaGCGGGAACAAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNCKQSH*REQGPG
Trigger: CCCAGGCCCTTGTTCCCGGCAGTGTGACTGTTTACA...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATTCATTGAGGGTGGCATaGTCTCGGCTCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYSLRVA*SRLSRR
Trigger: CCGGCGGGAGAGCCGAGACCATGCCACCCTCAATGA...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAACTCGAACTTGAGTaGAGGGCAGAAGACTTGATT +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDELELE*RAEDLI
Trigger: AATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATTCCACCTGAGATCCTaGCACTCTGAAGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSFHLRS*HSEDPL
Trigger: CAGGGGATCTTCAGAGTGCCAGGATCTCAGGTGGAA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTTTCCACCTGAGATCCTaGCACTCTGAAGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFFHLRS*HSEDPL
Trigger: CAGGGGATCTTCAGAGTGCCAGGATCTCAGGTGGAA...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGATTCCACCTGAGATCCTaGCACTCTGAAGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRFHLRS*HSEDPL
Trigger: CAGGGGATCTTCAGAGTGCCAGGATCTCAGGTGGAA...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTCATTGATGTGTGCCTaGCAGGACACAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANSLMCA*QDTGSC
Trigger: GCAGGACCCTGTGTCCTGCCAGGCACACATCAATGA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCTTCATCGATGGCCCCTaGCTCGCTGTGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCFIDGP*LAVWAV
Trigger: GACAGCCCACACAGCGAGCCAGGGGCCATCGATGAA...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTGTCCGCTGAGCTGTTaGGGAACATCTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANCPLSC*GTSSRW
Trigger: CCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGTGTCCGCTGAGCTGTTaGGGAACATCTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKCPLSC*GTSSRW
Trigger: CCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACA...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACCGGAAGGGCTTTACTTaGCCAAGAGGCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANRKGFT*PRGKGL
Trigger: CAGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCG...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAGGGCTCTTATTAGGATaGCAGGAAAATTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQGLLLG*QENSTA
Trigger: AGCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCC...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGTGCTCCCTTCCACTGTaGGGTGTCAAGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKCSLPL*GVKSSP
Trigger: AGGACTGGACTTGACACCCCACAGTGGAAGGGAGCA...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGCAGCTTTGGATATGTaGGGAATGTTCTATGTGGCT +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDAALDM*GMFYVA
Trigger: AGCCACATAGAACATTCCCCACATATCCAAAGCTGC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGTTCTCTCGGCTCCCCTaGGCAGCTTTGGATATGTGG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKFSRLP*AALDMW
Trigger: CCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAA...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCCGTTAAAGAGTTTATaGCTATACACTGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPPLKSL*LYTERG
Trigger: GCCTCTCTCAGTGTATAGCCATAAACTCTTTAACGG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCCCTGGGACACTTTCCTaGCTGCAAATATCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACPGTLS*LQISLR
Trigger: TCTGAGAGATATTTGCAGCCAGGAAAGTGTCCCAGG...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp CCTGGGAGGCTACTGGATTTAGGATCTGGGAGTATCTaGAGGGTAGAAATCAGAAGTCTTGTGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGRLLDLGSGSI*RVEIRSLVSWL
Trigger: CAGCCAGGACACAAGACTTCTGATTTCTACCCTCAAGATACTCCCAGATCCTAAATCCAGTAGCCTCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCGCTGCTCCAGACATTTaGACTGCTCCACCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCAAPDI*TAPPAA
Trigger: CGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGC...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACTGTGGTAGGTTTTCATaGCTGTGTAGAGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHCGRFS*LCRAHW
Trigger: CCAATGAGCTCTACACAGTCATGAAAACCTACCACA...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTGGTCTCCTGACTTATTaGACTGCTTCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFGLLTY*TASPPA
Trigger: AGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACC...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCCACCAGCGACTGAATTaGTATCTCGTTCATTTTGAT +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPHQRLN*YLVHFD
Trigger: ATCAAAATGAACGAGATATCAATTCAGTCGCTGGTG...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAAAATGAAAACGATGTaGCTCAAAGCCTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERKMKTM*LKASLP
Trigger: AGGCAAGGAGGCTTTGAGTCACATCGTTTTCATTTT...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTACACAGCTTGCTCACTaGTGTTTGACCTTTATTACC +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSTQLAH*CLTFIT
Trigger: GGTAATAAAGGTCAAACATCAGTGAGCAAGCTGTGT...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTAGGGCTGGAGGGCTCTaGTCTAAGACTTACCTTACT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFRAGGL*SKTYLT
Trigger: AGTAAGGTAAGTCTTAGATCAGAGCCCTCCAGCCCT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCAAAGGCGCTTCGAGGTaGGAAATCGTTAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLKGASR*EIVSTE
Trigger: TTCAGTGCTAACGATTTCTCACCTCGAAGCGCCTTT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCATTCGTGCCTCCTGAATaGCAGAGAAATATACCCAAC +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAFVPPE*QRNIPN
Trigger: GTTGGGTATATTTCTCTGTCATTCAGGAGGCACGAA...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTATTGGTACAGAATCTTTaGGACAAGAAAGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLLVQNL*DKKGNR
Trigger: TCTGTTGCCTTTCTTGTCTCAAAGATTCTGTACCAA...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTTGCTTGAGTAAATCGTaGTTGGCCTGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFCLSKS*LACSLV
Trigger: CACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCA...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGACTTCATTGATGTGTaGCTGGCAGGACACAGGGTC +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNDFIDV*LAGHRV
Trigger: GACCCTGTGTCCTGCCAGGCACACATCAATGAAGTC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGTGGTATGAGGCTCAGTaGCATTGTCATGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWWYEAQ*HCHGQL
Trigger: AAGTTGACCATGACAATGGCACTGAGCCTCATACCA...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACTGGTATGAGGCTCAGTaGCATTGTCATGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHWYEAQ*HCHGQL
Trigger: AAGTTGACCATGACAATGGCACTGAGCCTCATACCA...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATGTCGACCTCATCGAGTaGCCTTCGGAGAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYVDLIE*PSESAF
Trigger: GAAGGCGCTCTCCGAAGGGCACTCGATGAGGTCGAC...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCTTTCCAGTGACGATATaGGGGAGAAGCCATGTGGTA +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLFPVTI*GRSHVV
Trigger: TACCACATGGCTTCTCCCGCATATCGTCACTGGAAA...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGTATATACACTTAGTATaGGTGTGTCCAGATCTAGTA +
Preference number: 4 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKYIHLV*VCPDLV
Trigger: TACTAGATCTGGACACACGCATACTAAGTGTATATA...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTTGTTTGTGTTTTTCTaGAGGTTAGTGGTATATTGC +
Preference number: 4 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGLFVFF*RLVVYC
Trigger: GCAATATACCACTAACCTGCAGAAAAACACAAACAA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCGCAGGAAAATTCCACTaGTCACTTCTGAAATGCCAT +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFAGKFH*SLLKCH
Trigger: ATGGCATTTCAGAAGTGAGCAGTGGAATTTTCCTGC...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATCAGATTGCTATATTTTaGCTGGGAGGCTACTGGATT +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDQIAIF*LGGYWI
Trigger: AATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTG...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTTTCTACTCTGATTGTTaGTTTTCATCTGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAFYSDC*FSSGSC
Trigger: ACAACTGCCAGATGAAAAGCAACAATCAGAGTAGAA...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGATCTATCTACTAGGTaGAAAGATTTGGTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDDLSTR*KDLVSG
Trigger: GCCACTCACCAAATCTTTGCACCTAGTAGATAGATC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTAATTCCCTCCGATTGTaGACTCTGTCCGGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFNSLRL*TLSGVQ
Trigger: TTGAACCCCGGACAGAGTGCACAATCGGAGGGAATT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGAATGTTCTATGTGGCTaGTCAGAGGAGAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRNVLCG*SEERRP
Trigger: GGGTCTCCTCTCCTCTGAGCAGCCACATAGAACATT...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATCTAAGGAAGGAAAAGTaGACTCTGGTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDLRKEK*TLVVLV
Trigger: AACCAGAACAACCAGAGTGCACTTTTCCTTCCTTAG...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTAGGAGCACAGTAACCTaGCCCAGATTTTCAAAGATT +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSRSTVT*PRFSKI
Trigger: AATCTTTGAAAATCTGGGGCAGGTTACTGTGCTCCT...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGGAACTCGAACTTGAGTaGAGGGCAGAAGACTTGATT +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWELELE*RAEDLI
Trigger: AATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTC...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCGAACTCGAACTTGAGTaGAGGGCAGAAGACTTGATT +
Preference number: 4 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACELELE*RAEDLI
Trigger: AATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTC...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACCTGTAATGTCTGCATaGTGGCATCCAGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSPVMSA*WHPGFS
Trigger: GGAAAACCCTGGATGCCACCATGCAGACATTACAGG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGTCGATCGACTGTGTTaGAAGGCATCGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIVDRLC*KASETS
Trigger: TGATGTCTCCGATGCCTTCCAACACAGTCGATCGAC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAGTCGATCGACTGTGTTaGAAGGCATCGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRVDRLC*KASETS
Trigger: TGATGTCTCCGATGCCTTCCAACACAGTCGATCGAC...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGTGACGAGGATTTGTTaGATCTGGTGCACCCTCTCG +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNVTRIC*IWCTLS
Trigger: CGAGAGGGTGCACCAGATCCAACAAATCCTCGTCAC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCCCGAGATGTGCTCCGTaGGGGACTGGAGGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCPRCAP*GTGGRF
Trigger: AAAACGACCTCCAGTCCCCCACGGAGCACATCTCGG...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGGCAGAGCCGTGCTCATaGTCTTCTCGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKAEPCS*SSRCLL
Trigger: CAGAAGACATCGAGAAGACCATGAGCACGGCTCTGC...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAGACTTCTGGAGACAGTaGGAGTCTGTTTTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQDFWRQ*ESVFVC
Trigger: ACAAACAAAAACAGACTCCCACTGTCTCCAGAAGTC...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGACTTCTGGAGACAGTaGGAGTCTGTTTTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRDFWRQ*ESVFVC
Trigger: ACAAACAAAAACAGACTCCCACTGTCTCCAGAAGTC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAAATACTGTGCTACGATaGGGCTTAGGTTCTCACTAT +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQNTVLR*GLGSHY
Trigger: ATAGTGAGAACCTAAGCCCCATCGTAGCACAGTATT...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCCTAGGTCCCTCCCTTTaGGTGTATTTACCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLLGPSL*VYLPFR
Trigger: GCGAAAAGGTAAATACACCCAAAGGGAGGGACCTAG...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCTTGCTATATTTTGCCTaGGAGGCTACTGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFLLYFA*EATGFR
Trigger: CCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAA...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTTTCATCTGGCAGTTGTaGCAGATTGCTATATTTTGC +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTFIWQL*QIAIFC
Trigger: GCAAAATATAGCAATCTGCCACAACTGCCAGATGAA...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAATCCACACGGTCTGATTaGTGTTATGTATATCAGGCA +
Preference number: 4 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQSTRSD*CYVYQA
Trigger: TGCCTGATATACATAACACCAATCAGACCGTGTGGA...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTAGGAAAAGTGCACTCTaGTTGTTCTGGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSRKSAL*LFWFKE
Trigger: TTCCTTGAACCAGAACAACCAGAGTGCACTTTTCCT...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACAGCCACCACGCCCAGTTaGTACAGAATCTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTATTPS*YRIFET
Trigger: TGTCTCAAAGATTCTGTACCAACTGGGCGTGGTGGC...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
3UTR CAA 72 bp ACTCTGGTTGTTCTGGTTCAAGGAACAGCTTTGTTATaGGCCGGGGACAACTCACACAGAAAGGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TLVVLVQGTALL*AGDNSHRKEVS
Trigger: TGACACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACCAGAACAACCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 72 bp AAGTGCACTCTGGTTGTTCTGGTTCAAGGAACAGCTTaGTTATTGGCCGGGGACAACTCACACAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: KCTLVVLVQGTA*LLAGDNSHRKE
Trigger: CTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACCAGAACAACCAGAGTGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGAACTTAGTTTGAGATaGCATCTTCTGACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGELSLR*HLLTWP
Trigger: TGGCCACGTCAGAAGATGTCATCTCAAACTAAGTTC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGGTCTCCTGACTTATTaGACTGCTTCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNGLLTY*TASPPA
Trigger: AGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTCAGATTTTTCTACTCTaGTTGTTGCTTTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTQIFLL*LLLFIW
Trigger: CCAGATGAAAAGCAACAATCAGAGTAGAAAAATCTG...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCAAAGCCAATGTTCAGTaGACGTCGATGGGACTGAGT +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIKANVQ*TSMGLS
Trigger: ACTCAGTCCCATCGACGTTCACTGAACATTGGCTTT...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCAGCTCCTCGTGCATCTaGAGGCCAATCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCSSSCI*RPISLL
Trigger: GAGCAAGGAGATTGGCCTGCAGATGCACGAGGAGCT...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGATGTCCTGTAATGTCTaGATGGTGGCATCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRMSCNV*MVASRV
Trigger: AACCCTGGATGCCACCATGCAGACATTACAGGACAT...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCACAGATTTGCCCGTGTaGCATTATCCAGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLTDLPV*HYPETA
Trigger: AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTGCTCACTTCTGAAATaGCATTGGGAGGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDCSLLK*HWEVSK
Trigger: TTTTGAAACCTCCCAATGGCATTTCAGAAGTGAGCA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTGCAGTTGTGGCAGATTaGTATATTTTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFAVVAD*YILPGR
Trigger: CCTCCCAGGCAAAATATAGCAATCTGCCACAACTGC...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCACTAAGGAAGGAAAAGTaGACTCTGGTTGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LCTLSGVQKALRGEKSLALRKEK*TLVVLV
Trigger: AACCAGAACAACCAGAGTGCACTTTTCCTTCCTTAG...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGATTGACCTTTGAGGCCTaGTGGATTCCATTCATACCG +
Preference number: 4 (lower is better)
Translates to: YTQDTLRAFREHETGSPRLTFEA*WIPFIP
Trigger: CGGTATGAATGGAATCCAGCAGGCCTCAAAGGTCAA...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATACATCCAGCCCTTCGTaGCGAGAGGTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYTSSPS*REVSRL
Trigger: CAACCTGGAGACCTCTCGCCACGAAGGGCTGGATGT...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACAAGATCCCCTGCTGCTaGAGTCCATATAAATTGATG +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHKIPCC*SPYKLM
Trigger: CATCAATTTATATGGACTCCAGCAGCAGGGGATCTT...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACCCACTTCTTCATCGCTaGTATGAGGCTCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANPLLHR*YEAQCH
Trigger: ATGGCACTGAGCCTCATACCAGCGATGAAGAAGTGG...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATGTCCAGCACCACATCTaGCGCCTGCTTGACCGTGTT +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYVQHHI*RLLDRV
Trigger: AACACGGTCAAGCAGGCGCCAGATGTGGTGCTGGAC...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCTATTACCCTATTTTATaGAGCAGAACAGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFYYPIL*SRTVRL
Trigger: GAGCCTGACTGTTCTGCTCCATAAAATAGGGTAATA...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCGCCAGTGTCAAATCTTaGGCAGGTCACAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCASVKS*AGHSTA
Trigger: GGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGC...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCAAGAAGTCTTGTGTCCTaGCTGGACAGTATAGCATCC +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSRSLVS*LDSIAS
Trigger: GGATGCTATACTGTCCAGCCAGGACACAAGACTTCT...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGTCCACACGGTCTGATTaGTGTTATGTATATCAGGCA +
Preference number: 4 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWSTRSD*CYVYQA
Trigger: TGCCTGATATACATAACACCAATCAGACCGTGTGGA...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACAGTCTTGGATGGCAAATaGGGAAAACATCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTVLDGK*GKHHQA
Trigger: GGCCTGATGATGTTTTCCCCATTTGCCATCCAAGAC...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATGTGGTAGGTTTTCATaGCTGTGTAGAGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSCGRFS*LCRAHW
Trigger: CCAATGAGCTCTACACAGTCATGAAAACCTACCACA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTTGTGGTAGGTTTTCATaGCTGTGTAGAGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFCGRFS*LCRAHW
Trigger: CCAATGAGCTCTACACAGTCATGAAAACCTACCACA...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACATCCTCTTGGCAATGTTaGTCTTGCTCATGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTSSWQC*SCSCRS
Trigger: AGACCTACATGAGCAAGATCAACATTGCCAAGAGGA...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTATATCTCGTTCATTTTaGTCGTCCACAAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFISRSF*SSTRGS
Trigger: AGACCCCCTTGTGGACGATCAAAATGAACGAGATAT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCTTGTTTGTGTTTTTCTaGAGGTTAGTGGTATATTGC +
Preference number: 4 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPLFVFF*RLVVYC
Trigger: GCAATATACCACTAACCTGCAGAAAAACACAAACAA...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGACTCAAAGCCTCCTTaGCTGTTTAGTTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGDSKPP*LFSSKS
Trigger: AGATTTGGAACTAAACAGGCAAGGAGGCTTTGAGTC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATGGCTCATGCGTTTCATaGAAGACGGCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYGSCVS*KTAPAT
Trigger: TGTGGCTGGTGCCGTCTTGCATGAAACGCATGAGCC...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTACAGATTTGCCCGTGTaGCATTATCCAGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFTDLPV*HYPETA
Trigger: AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGCCAGTGTACACAGCTTaGTCACTGATGTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRPVYTA*SLMFDL
Trigger: AAGGTCAAACATCAGTGAGCAAGCTGTGTACACTGG...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTCTAGTAGCTTGCCCTaGTCAGCTCCTCTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANSSSLP*SAPLAK
Trigger: TTTTGCAAGAGGAGCTGACCAGGGCAAGCTACTAGA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATACTGGAGGTCGTTTTTaGAAGAGGCCTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNTGGRF*KRPCHP
Trigger: TGGATGACAAGGCCTCTTCCAAAAACGACCTCCAGT...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCAGGGCTCTTATTAGGATaGCAGGAAAATTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSGLLLG*QENSTA
Trigger: AGCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCC...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCACTGGATTTAGGATCTaGGAGTATCTTGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLTGFRI*EYLEGR
Trigger: TCTACCCTCAAGATACTCCCAGATCCTAAATCCAGT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTAAACCTTTCATCCCTTaGGAATCCATCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFKPFIP*ESISLL
Trigger: CAGGAGAGAGATGGATTCCCAAGGGATGAAAGGTTT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 72 bp GCTTTTCATCTGGCAGTTGTGGCAGATTGCTATATTTaGCCTGGGAGGCTACTGGATTTAGGATCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: AFHLAVVADCYI*PGRLLDLGSGS
Trigger: ACTCCCAGATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCCAGATGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 72 bp AGACCAGCCACTCTGAAGCAATCAGAATCAAACCTATaGCCAAACCATGTAAACAGTCACACTGCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: RPATLKQSESNL*PNHVNSHTAGN
Trigger: GTTCCCGGCAGTGTGACTGTTTACATGGTTTGGCAATAGGTTTGATTCTGATTGCTTCAGAGTGGCTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGGAACTTAGTTTGAGATaGCATCTTCTGACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKELSLR*HLLTWP
Trigger: TGGCCACGTCAGAAGATGTCATCTCAAACTAAGTTC...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAGCTGGTGATAACGCATaGGCAGTTCTGTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQAGDNA*AVLSGR
Trigger: CCGTCCAGACAGAACTGCTCATGCGTTATCACCAGC...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATAGAGGAAGTTTCCAGTaGCGATATGCGGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYRGSFQ*RYAGEA
Trigger: GGCTTCTCCCGCATATCGTCACTGGAAACTTCCTCT...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTAAAATGAAAACGATGTaGCTCAAAGCCTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFKMKTM*LKASLP
Trigger: AGGCAAGGAGGCTTTGAGTCACATCGTTTTCATTTT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACCGTTGTCAACTAACTaGTCAGTACGGCTTTCAATA +
Preference number: 4 (lower is better)
Translates to: MSGETSAICVCTSLNVNSPLSTN*SVRLSI
Trigger: TATTGAAAGCCGTACTGATCAGTTAGTTGACAACGG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATCTAACCCCATGGTTGTaGGCCAGCCACTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYLTPWL*ASHSSF
Trigger: GAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAG...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACGAGAACCGGGGAAGTTaGCATGAAATGTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANENRGS*HEMSAL
Trigger: TAATGCTGACATTTCATGTCAACTTCCCCGGTTCTC...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAATTCAGGAGCTCCTCGTaGATCTGCAGGCCAATCTCC +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQFRSSS*ICRPIS
Trigger: GGAGATTGGCCTGCAGATGCACGAGGAGCTCCTGAA...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTGGTATGAGGCTCAGTaGCATTGTCATGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANWYEAQ*HCHGQL
Trigger: AAGTTGACCATGACAATGGCACTGAGCCTCATACCA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATCAGGGCACACAGATTTaGCCGTGTGCCATTATCCAG +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYQGTQI*PCAIIQ
Trigger: CTGGATAATGGCACACGGGCAAATCTGTGTGCCCTG...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGCAGGAAAATTCCACTaGTCACTTCTGAAATGCCAT +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIAGKFH*SLLKCH
Trigger: ATGGCATTTCAGAAGTGAGCAGTGGAATTTTCCTGC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACCTTCCTCTTAATGAATaGTTCCATACTGCCGTTAAA +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHLPLNE*FHTAVK
Trigger: TTTAACGGCAGTATGGAAGCATTCATTAAGAGGAAG...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACCAACTAAATTGTTCCTaGAATTTGGCATTCATTGGC +
Preference number: 4 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHQLNCS*NLAFIG
Trigger: GCCAATGAATGCCAAATTGCAGGAACAATTTAGTTG...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCACTGGATTTAGGATCTaGGAGTATCTTGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GSCGRLLYFAWEATGFRITGFRI*EYLEGR
Trigger: TCTACCCTCAAGATACTCCCAGATCCTAAATCCAGT...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTTTCATCTGGCAGTTGTaGCAGATTGCTATATTTTGC +
Preference number: 4 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGFIWQL*QIAIFC
Trigger: GCAAAATATAGCAATCTGCCACAACTGCCAGATGAA...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTTTGTTGCTTTTCATCTaGCAGTTGTGGCAGATTGCT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFLLLFI*QLWQIA
Trigger: AGCAATCTGCCACAACTGCCAGATGAAAAGCAACAA...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGAAGTATTTTTCCACTTaGCCTGCGTCAAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKKYFST*PASRLR
Trigger: TCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTT...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCTTTGGTGAGTGGCATTaGCTAAAATTTAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: GHALNATSRPGHEKSSTFFGEWH*LKFNCS
Trigger: GCTACAATTAAATTTTAGCCAATGCCACTCACCAAA...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGCCGATAGCCAAAATATaGCTCAATTTCCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRPIAKI*LNFPVS
Trigger: AGACACAGGGAAATTGAGCCATATTTTGGCTATCGG...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGAGGAAAAGTGCACTCTaGTTGTTCTGGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRRKSAL*LFWFKE
Trigger: TTCCTTGAACCAGAACAACCAGAGTGCACTTTTCCT...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCAGCAATTTCCTAGGGTaGTTTTGGTCTGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLSNFLG*FWSVFP
Trigger: AGGAAAAACAGACCAAAACCACCCTAGGAAATTGCT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACGGAGTCCATATAAATTaGTGTAACGGATGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANGVHIN*CNGCSS
Trigger: AGAGCTGCATCCGTTACATCAATTTATATGGACTCC...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACCACCAGCGACTGAATTaGTATCTCGTTCATTTTGAT +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDHQRLN*YLVHFD
Trigger: ATCAAAATGAACGAGATATCAATTCAGTCGCTGGTG...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACACACCAGCGACTGAATTaGTATCTCGTTCATTTTGAT +
Preference number: 4 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTHQRLN*YLVHFD
Trigger: ATCAAAATGAACGAGATATCAATTCAGTCGCTGGTG...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCAAAGCCAATGTTCAGTaGACGTCGATGGGACTGAGT +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCKANVQ*TSMGLS
Trigger: ACTCAGTCCCATCGACGTTCACTGAACATTGGCTTT...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACCCGTTGTCAACTAACTaGTCAGTACGGCTTTCAATA +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANPLSTN*SVRLSI
Trigger: TATTGAAAGCCGTACTGATCAGTTAGTTGACAACGG...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACCGGTATAGCTTGTCCTaGATCCTTAATGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANRYSLS*ILNECF
Trigger: GAAGCATTCATTAAGGATTCAGGACAAGCTATACCG...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCATGTCCATGACTGTGTaGTTGTCACTTCGGGAATCC +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCMSMTV*LSLRES
Trigger: GGATTCCCGAAGTGACAAGCACACAGTCATGGACAT...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCTTCTACTCTGATTGTTaGTTTTCATCTGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLFYSDC*FSSGSC
Trigger: ACAACTGCCAGATGAAAAGCAACAATCAGAGTAGAA...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGATCTATCTACTAGGTaGAAAGATTTGGTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNDLSTR*KDLVSG
Trigger: GCCACTCACCAAATCTTTGCACCTAGTAGATAGATC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCAGTCCTCCACATTCGTaGCTCCTGAATGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCSPPHS*LLNDRE
Trigger: TTCTCTGTCATTCAGGAGGCACGAATGTGGAGGACT...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGAAGATCCCCTGCTGCTaGAGTCCATATAAATTGATG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKKIPCC*SPYKLM
Trigger: CATCAATTTATATGGACTCCAGCAGCAGGGGATCTT...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATGTGCACCCTCTCGGCTaGGTTCTCCAGTTTAATAGT +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYVHPLG*VLQFNS
Trigger: ACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCAC...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATCCACTTCTTCATCGCTaGTATGAGGCTCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYPLLHR*YEAQCH
Trigger: ATGGCACTGAGCCTCATACCAGCGATGAAGAAGTGG...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTAGCATTTCTAGGTTTTaGAGTATTCCACACCACTGT +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFSISRF*SIPHHC
Trigger: ACAGTGGTGTGGAATACTCCAAAACCTAGAAATGCT...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCGAAGAGGAGGTAAAATaGAATCGAAGGAGAGCGACC +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCEEEVK*NRRRAT
Trigger: GGTCGCTCTCCTTCGATTCCATTTTACCTCCTCTTC...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTCACCACTTCATCCAATaGGCTGAAATGTTAATGATG +
Preference number: 4 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFHHFIQ*AEMLMM
Trigger: CATCATTAACATTTCAGCCCATTGGATGAAGTGGTG...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGTTGCTATATTTTGCCTaGGAGGCTACTGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKLLYFA*EATGFR
Trigger: CCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAA...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGTTGTTGCTTTTCATCTaGCAGTTGTGGCAGATTGCT +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKLLLFI*QLWQIA
Trigger: AGCAATCTGCCACAACTGCCAGATGAAAAGCAACAA...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGCCGATAGCCAAAATATaGCTCAATTTCCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKPIAKI*LNFPVS
Trigger: AGACACAGGGAAATTGAGCCATATTTTGGCTATCGG...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACACAATTTGGCATTCATTaGCTGATTCATGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTQFGIH*LIHAWQ
Trigger: TTGCCATGCATGAATCAGCCAATGAATGCCAAATTG...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCTCCTCTTGGCAATGTTaGTCTTGCTCATGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCSSWQC*SCSCRS
Trigger: AGACCTACATGAGCAAGATCAACATTGCCAAGAGGA...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGCAGATTTTTCTACTCTaGTTGTTGCTTTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRQIFLL*LLLFIW
Trigger: CCAGATGAAAAGCAACAATCAGAGTAGAAAAATCTG...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACATTCCTAGAATAGACTaGACGTCGGTTACACATAAA +
Preference number: 4 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDIPRID*TSVTHK
Trigger: TTTATGTGTAACCGACGTTCAGTCTATTCTAGGAAT...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAACCTGTAATGTCTGCATaGTGGCATCCAGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQPVMSA*WHPGFS
Trigger: GGAAAACCCTGGATGCCACCATGCAGACATTACAGG...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCCTGAATCCTGGTTCCTaGTTCGAGCATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCLNPGS*FEHFFF
Trigger: GAAGAAGAAATGCTCGAACCAGGAACCAGGATTCAG...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360413.7
CDS-3UTR TCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAACATGCTGAGGTCTCCTaGCTTATTGAACTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQHAEVS*LIELLL
Trigger: GAGAAGCAGTTCAATAAGTCAGGAGACCTCAGCATG...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR TCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATCAGCCTGATTTAAAATaGAAACGATGTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNQPDLK*KRCDSK
Trigger: CTTTGAGTCACATCGTTTTCATTTTAAATCAGGCTG...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATAAAATCCACACGGTCTaGTTGGTGTTATGTATATCA +
Preference number: 4 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNKIHTV*LVLCIS
Trigger: TGATATACATAACACCAATCAGACCGTGTGGATTTT...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAATGTCCATGACTGTGTaGTTGTCACTTCGGGAATCC +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQMSMTV*LSLRES
Trigger: GGATTCCCGAAGTGACAAGCACACAGTCATGGACAT...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAATGTCCTGTAATGTCTaGATGGTGGCATCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQMSCNV*MVASRV
Trigger: AACCCTGGATGCCACCATGCAGACATTACAGGACAT...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGTTTGGTGAGTGGCATTaGCTAAAATTTAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRFGEWH*LKFNCS
Trigger: GCTACAATTAAATTTTAGCCAATGCCACTCACCAAA...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATGCAGCTTTGGATATGTaGGGAATGTTCTATGTGGCT +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYAALDM*GMFYVA
Trigger: AGCCACATAGAACATTCCCCACATATCCAAAGCTGC...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 72 bp AATTTCCCTGTGTCTCTTCCCACTCCGATTTCTTCATaGAATAGAAACCTTTCATCCCTTGGGAATCCATCT +
Preference number: 4 (lower is better)
Translates to: NFPVSLPTPISS*NRNLSSLGNPS
Trigger: AGATGGATTCCCAAGGGATGAAAGGTTTCTATTCAATGAAGAAATCGGAGTGGGAAGAGACACAGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAATATCTCGTTCATTTTaGTCGTCCACAAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQISRSF*SSTRGS
Trigger: AGACCCCCTTGTGGACGATCAAAATGAACGAGATAT...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAACTGAAGATCCCCTGCTaGTGGAGTCCATATAAATTG +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQLKIPC*WSPYKL
Trigger: CAATTTATATGGACTCCAGCAGCAGGGGATCTTCAG...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTATATACACTTAGTATaGGTGTGTCCAGATCTAGTA +
Preference number: 4 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANYIHLV*VCPDLV
Trigger: TACTAGATCTGGACACACGCATACTAAGTGTATATA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCTGCTCACTTCTGAAATaGCATTGGGAGGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCCSLLK*HWEVSK
Trigger: TTTTGAAACCTCCCAATGGCATTTCAGAAGTGAGCA...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR GCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAAACCCATGCCATAATTTaGTTGGTGCTGTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQTHAII*LVLSFP
Trigger: TGGGAATGACAGCACCAAGCAAATTATGGCATGGGT...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR GCA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAACCAATGACCAGTAACTaGCAATGCCAGTTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQPMTSN*QCQLGQ
Trigger: TTGACCTAACTGGCATTGGCAGTTACTGGTCATTGG...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CCA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCCACCACTTCATCCAATaGGCTGAAATGTTAATGATG +
Preference number: 4 (lower is better)
Translates to: MLMMESRALIRMAGKFHCHHFIQ*AEMLMM
Trigger: CATCATTAACATTTCAGCCCATTGGATGAAGTGGTG...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATAAAATCCACACGGTCTaGTTGGTGTTATGTATATCA +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYKIHTV*LVLCIS
Trigger: TGATATACATAACACCAATCAGACCGTGTGGATTTT...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR TCA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATATTCCTAGAATAGACTaGACGTCGGTTACACATAAA +
Preference number: 4 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYIPRID*TSVTHK
Trigger: TTTATGTGTAACCGACGTTCAGTCTATTCTAGGAAT...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
3UTR CAA 72 bp CTCAGTTTTTCTATCAGGATTAGGAAGGATGTCTGTTaGATACAGAGTCCATTGATGTTTCTTATCCACCTC +
Preference number: 4 (lower is better)
Translates to: LSFSIRIRKDVC*IQSPLMFLIHL
Trigger: GAGGTGGATAAGAAACATCAATGGACTCTGTATCAAACAGACATCCTTCCTAATCCTGATAGAAAAACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS GCA 90 bp TCTCGGTGGGCGTCACGGCCGGGCTGCCCACGCCCGAGCTGCTGCTaGTGCTGGACCGGTGCTGGACCACCGGCCGCACGGGCCGCATGG +
Preference number: 5 (lower is better)
Translates to: SRWASRPGCPRPSCC*CWTGAGPPAARAAW
Trigger: CCATGCGGCCCGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGGGCAGCCCGGCCGTGACGCCCACCGAGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 90 bp ACATCTTCTCGGTGGGCGTCACGGCCGGGCTGCCCACGCCCGAGCTaGTGCTGCTGCTGGACCGGTGCTGGACCACCGGCCGCACGGGCC +
Preference number: 5 (lower is better)
Translates to: TSSRWASRPGCPRPS*CCCWTGAGPPAARA
Trigger: GGCCCGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGGGCAGCCCGGCCGTGACGCCCACCGAGAAGATGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 90 bp CTGAGCTGTTGGGGAACATCTTCTCGGTGGGCGTCACGGCCGGGCTaGCCACGCCCGAGCTGCTGCTGCTGCTGGACCGGTGCTGGACCA +
Preference number: 5 (lower is better)
Translates to: LSCWGTSSRWASRPG*PRPSCCCCWTGAGP
Trigger: TGGTCCAGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGGGCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 90 bp TGGTGCCCGACTTGTCCGCTGAGCTGTTGGGGAACATCTTCTCGGTaGGCGTCACGGCCGGGCTGCCCACGCCCGAGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WCPTCPLSCWGTSSR*ASRPGCPRPSCCCC
Trigger: GCAGCAGCAGCAGCTCGGGCGTGGGCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 90 bp CGGCGCGGCCCATCCTGCAGGTCACATGGTGCCCGACTTGTCCGCTaGGCTGTTGGGGAACATCTTCTCGGTGGGCGTCACGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RRGPSCRSHGARLVR*AVGEHLLGGRHGRA
Trigger: AGCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGGCCGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 90 bp CCACAGCGGGCCACGGCGGCGCGGCCCATCCTGCAGGTCACATGGTaGCCGACTTGTCCGCTGAGCTGTTGGGGAACATCTTCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: PQRATAARPILQVTW*PTCPLSCWGTSSRW
Trigger: CCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGGCCGCGCCGCCGTGGCCCGCTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 90 bp GAGCCACAGCGGGCCACGGCGGCGCGGCCCATCCTGCAGGTCACATaGTGCCCGACTTGTCCGCTGAGCTGTTGGGGAACATCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: EPQRATAARPILQVT*CPTCPLSCWGTSSR
Trigger: CCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGGCCGCGCCGCCGTGGCCCGCTGTGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 90 bp CCTCGGCCTCCAGGGACTTGTGGTCCCCTAGGCTGCTGTGCCTGGTaGAACCGCAGGTCGACCTCATCGAGTGCCCTTCGGAGAGCGCCT +
Preference number: 5 (lower is better)
Translates to: PRPPGTCGPLGCCAW*NRRSTSSSALRRAP
Trigger: AGGCGCTCTCCGAAGGGCACTCGATGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 90 bp CCCATCCTGCAGGTCACATGGTGCCCGACTTGTCCGCTGAGCTGTTaGGGAACATCTTCTCGGTGGGCGTCACGGCCGGGCTGCCCACGC +
Preference number: 5 (lower is better)
Translates to: PILQVTWCPTCPLSC*GTSSRWASRPGCPR
Trigger: GCGTGGGCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 90 bp ATGCGTGTGCCCAGCTGCGCGCAATCTGAGCCTGGCCCAAAGCCTTaGTACATGGGGACCTCAGGCTGGGCCTCGCAGCATGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: MRVPSCAQSEPGPKP*YMGTSGWASQHGWA
Trigger: TGCCCAGCCATGCTGCGAGGCCCAGCCTGAGGTCCCCATGTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGCAGCTGGGCACACGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp CTCGGCTCACTGCAAGCTCCACCTGCCGGATTCACGCCATTCTCCTaGCTCAGCCTCCCGATTAGCTGGGACTACAGGCGCCCGCCACTG +
Preference number: 5 (lower is better)
Translates to: LGSLQAPPAGFTPFS*LSLPISWDYRRPPL
Trigger: CAGTGGCGGGCGCCTGTAGTCCCAGCTAATCGGGAGGCTGAGGCAGGAGAATGGCGTGAATCCGGCAGGTGGAGCTTGCAGTGAGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490348.1
CDS CCA 90 bp GTCTTCTCGATGTCTTCTGCCAGGGCCTCGGCCTCCAGGGACTTGTaGTCCCCTAGGCTGCTGTGCCTGGTGGAACCGCAGGTCGACCTC +
Preference number: 5 (lower is better)
Translates to: VFSMSSARASASRDL*SPRLLCLVEPQVDL
Trigger: GAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGGCCGAGGCCCTGGCAGAAGACATCGAGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 90 bp TGCCCAGCTGCGCGCAATCTGAGCCTGGCCCAAAGCCTTGGTACATaGGGACCTCAGGCTGGGCCTCGCAGCATGGCTGGGCAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: CPAARNLSLAQSLGT*GPQAGPRSMAGQFA
Trigger: AGCAAACTGCCCAGCCATGCTGCGAGGCCCAGCCTGAGGTCCCCATGTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGCAGCTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 90 bp TCTGTGCACGCCTATGCACATGCGTGTGCCCAGCTGCGCGCAATCTaGGCCTGGCCCAAAGCCTTGGTACATGGGGACCTCAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SVHAYAHACAQLRAI*AWPKALVHGDLRLG
Trigger: GCCCAGCCTGAGGTCCCCATGTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGCAGCTGGGCACACGCATGTGCATAGGCGTGCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp GCCCCTCCTTCAGCCAGTGACATGTGCCAGCCCTGGTGTGGGCCCTaGTCAGTCCCAGACTCCCCAGGGAGCTCACATCGATCAGATCAG +
Preference number: 5 (lower is better)
Translates to: APPSASDMCQPWCGP*SVPDSPGSSHRSDQ
Trigger: CTGATCTGATCGATGTGAGCTCCCTGGGGAGTCTGGGACTGAGCAGGGCCCACACCAGGGCTGGCACATGTCACTGGCTGAAGGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 90 bp CGGCAGGAGAGTCTGTGCACGCCTATGCACATGCGTGTGCCCAGCTaGGCGCAATCTGAGCCTGGCCCAAAGCCTTGGTACATGGGGACC +
Preference number: 5 (lower is better)
Translates to: RQESLCTPMHMRVPS*AQSEPGPKPWYMGT
Trigger: GGTCCCCATGTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGCAGCTGGGCACACGCATGTGCATAGGCGTGCACAGACTCTCCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp GTGCCCGTGAGGTCCAAGCTAGGGTGTGGACGGCAGGAGAGTCTGTaGACGCCTATGCACATGCGTGTGCCCAGCTGCGCGCAATCTGAG +
Preference number: 5 (lower is better)
Translates to: VPVRSKLGCGRQESL*TPMHMRVPSCAQSE
Trigger: CTCAGATTGCGCGCAGCTGGGCACACGCATGTGCATAGGCGTGCACAGACTCTCCTGCCGTCCACACCCTAGCTTGGACCTCACGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCAGCGAGGCCCCCTTCTaGAAGGATAGCTCACGCGGG +
Preference number: 5 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSSEAPF*KDSSRG
Trigger: CCCGCGTGAGCTATCCTTCAAGAAGGGGGCCTCGCT...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGTCGGCCTCCAGGGACTaGTGGTCCCCTAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSASRD*WSPRLL
Trigger: CAGCAGCCTAGGGGACCACAAGTCCCTGGAGGCCGA...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 90 bp GGCGCCTGCTTGACCGTGTTCTGCCTCTCGAGTTCCCGCAACTCGTaGAGAGCCGTGCTCATGGTCTTCTCGATGTCTTCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GACLTVFCLSSSRNS*RAVLMVFSMSSARA
Trigger: GGCCCTGGCAGAAGACATCGAGAAGACCATGAGCACGGCTCTGCACGAGTTGCGGGAACTCGAGAGGCAGAACACGGTCAAGCAGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 90 bp AAGCCCTCCCCAGCACCACCGCTCACAGTGTTCTTTCTCCCAGTCTaGTTGTCCCTGTGGCGTGTCCTGCACAGCGGGTACTCGGGAGTC +
Preference number: 5 (lower is better)
Translates to: KPSPAPPLTVFFLPV*LSLWRVLHSGYSGV
Trigger: GACTCCCGAGTACCCGCTGTGCAGGACACGCCACAGGGACAAGCAGACTGGGAGAAAGAACACTGTGAGCGGTGGTGCTGGGGAGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 90 bp GGTGTGGACGGCAGGAGAGTCTGTGCACGCCTATGCACATGCGTGTaGCCAGCTGCGCGCAATCTGAGCCTGGCCCAAAGCCTTGGTACA +
Preference number: 5 (lower is better)
Translates to: GVDGRRVCARLCTCV*PAARNLSLAQSLGT
Trigger: TGTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGCAGCTGGGCACACGCATGTGCATAGGCGTGCACAGACTCTCCTGCCGTCCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp ACCTCAGGCTGGGCCTCGCAGCATGGCTGGGCAGTTTGCTCAGCATaGTGTAGCAGGTGGGAAGAGAGGTCAACAGCCACCCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: TSGWASQHGWAVCSA*CSRWEERSTATPQP
Trigger: AGGCTGTGGGGTGGCTGTTGACCTCTCTTCCCACCTGCTACACCATGCTGAGCAAACTGCCCAGCCATGCTGCGAGGCCCAGCCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp AGGATCCCCTGGATACTGAGAGCCCTGGTGGGTGATGGCACTCCCTaGGGGCTGTCAGCTGCATCAGGATGTAGGCCAGAGGCACCCAAC +
Preference number: 5 (lower is better)
Translates to: RIPWILRALVGDGTP*GLSAASGCRPEAPN
Trigger: GTTGGGTGCCTCTGGCCTACATCCTGATGCAGCTGACAGCCCCCAGGGAGTGCCATCACCCACCAGGGCTCTCAGTATCCAGGGGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520860.1
CDS-3UTR CAA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGCGGGAGCTGCGGATTTaGGAGGAGAAGCGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: FHLACVKAQIWGWMSGETRELRI*EEKRSA
Trigger: GGCTGAGCGCTTCTCCTCCAAAATCCGCAGCTCCCG...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCTCGCCCAGGGTCTGCTaGAGTAAATCGTGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GAAGAPALLWSSVDTREVSPRVC*SKSCLA
Trigger: GGCCAAGCACGATTTACTCAAGCAGACCCTGGGCGA...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCACATCTGGCGCCTGCTaGACCGTGTTCTGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSTSGAC*TVFCLS
Trigger: CGAGAGGCAGAACACGGTCAAGCAGGCGCCAGATGT...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCGCGGACAGGGCTGGCTaGAAGGTGGTCATCATCTCG +
Preference number: 5 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSADRAG*KVVIIS
Trigger: CGAGATGATGACCACCTTCAAGCCAGCCCTGTCCGC...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 90 bp GACATCCAGCCCTTCGTGGCGAGAGGTCTCCAGGTTGTATTCAGCTaGGAGATAGGTCCGGAAGGTGCGGGCCAGGCTGGCATGGAAGCC +
Preference number: 5 (lower is better)
Translates to: DIQPFVARGLQVVFS*EIGPEGAGQAGMEA
Trigger: GGCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTCGCCACGAAGGGCTGGATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000485983.6
ENST00000618999.4
CDS TCA 90 bp ACCTCATCGAGTGCCCTTCGGAGAGCGCCTTCTTGTCAGGGTAGTTaGTGCTGCCAGCGCTCCCGAACGTCGCCATCCTCCGCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: TSSSALRRAPSCQGS*CCQRSRTSPSSASQ
Trigger: CTGAGAAGCGGAGGATGGCGACGTTCGGGAGCGCTGGCAGCATCAACTACCCTGACAAGAAGGCGCTCTCCGAAGGGCACTCGATGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 90 bp CATCCACGAGAGGCGCGGCGCCTCTTTGGTCGTGCAGCCAGCCCCTaGCTTGCTTTTGAAGGCTCTGCTAAGTCGATGGTCAGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: HPREARRLFGRAASP*LAFEGSAKSMVRLP
Trigger: TGGCAACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGCGCCGCGCCTCTCGTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CCA 90 bp CAATCTGAGCCTGGCCCAAAGCCTTGGTACATGGGGACCTCAGGCTaGGCCTCGCAGCATGGCTGGGCAGTTTGCTCAGCATGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: QSEPGPKPWYMGTSG*ASQHGWAVCSAWCS
Trigger: GCTACACCATGCTGAGCAAACTGCCCAGCCATGCTGCGAGGCCCAGCCTGAGGTCCCCATGTACCAAGGCTTTGGGCCAGGCTCAGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp TGGGCCAATGCCAGCCAGCCCGCCCAGTGTGCCCATTTCATTTTGTaGGGAACAAGGGGCTGCAGTAGGCTCCTTCTCTCCTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: WANASQPAQCAHFIL*GTRGCSRLLLSSLP
Trigger: GGGCAGAGAGGAGAGAAGGAGCCTACTGCAGCCCCTTGTTCCCCACAAAATGAAATGGGCACACTGGGCGGGCTGGCTGGCATTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491467.1
CDS-3UTR CAA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTAGTCCATCCACGCCGTaGTGCCGGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTSPSTP*CRPSHQ
Trigger: CTGGTGGGAGGGCCGGCACAACGGCGTGGATGGACT...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 90 bp GGAGGTCGTTTTTGGAAGAGGCCTTGTCATCCAGCAATGGCCCACTaGTGGCCTCGCTGTCAGCCTTCTGGCTCAGGCTGTCGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: GGRFWKRPCHPAMAH*WPRCQPSGSGCRRR
Trigger: CCTTCTCCGACAGCCTGAGCCAGAAGGCTGACAGCGAGGCCAGCAGTGGGCCATTGCTGGATGACAAGGCCTCTTCCAAAAACGACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000491467.1
CDS CCA 90 bp GTGCAGCCAGCCCCTGGCTTGCTTTTGAAGGCTCTGCTAAGTCGATaGTCAGGTTGCCAAAGGGCCGGTCATCTCGCATCCTCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: VQPAPGLLLKALLSR*SGCQRAGHLASSLP
Trigger: AGGGAGGGAGGATGCGAGATGACCGGCCCTTTGGCAACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CCA 90 bp GCACCACCGCTCACAGTGTTCTTTCTCCCAGTCTGCTTGTCCCTGTaGCGTGTCCTGCACAGCGGGTACTCGGGAGTCAGTGTTCCGTTC +
Preference number: 5 (lower is better)
Translates to: APPLTVFFLPVCLSL*RVLHSGYSGVSVPF
Trigger: GAACGGAACACTGACTCCCGAGTACCCGCTGTGCAGGACACGCCACAGGGACAAGCAGACTGGGAGAAAGAACACTGTGAGCGGTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CCA 90 bp AAGCCTTGGTACATGGGGACCTCAGGCTGGGCCTCGCAGCATGGCTaGGCAGTTTGCTCAGCATGGTGTAGCAGGTGGGAAGAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: KPWYMGTSGWASQHG*AVCSAWCSRWEERS
Trigger: TGACCTCTCTTCCCACCTGCTACACCATGCTGAGCAAACTGCCCAGCCATGCTGCGAGGCCCAGCCTGAGGTCCCCATGTACCAAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp TTTCCGTCAGCTCATCCAAGTGCCCGTGAGGTCCAAGCTAGGGTGTaGACGGCAGGAGAGTCTGTGCACGCCTATGCACATGCGTGTGCC +
Preference number: 5 (lower is better)
Translates to: FPSAHPSAREVQARV*TAGESVHAYAHACA
Trigger: GGCACACGCATGTGCATAGGCGTGCACAGACTCTCCTGCCGTCCACACCCTAGCTTGGACCTCACGGGCACTTGGATGAGCTGACGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCTGTCGATCGACTGTGTaGGAAGGCATCGGAGACATC +
Preference number: 5 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSCRSTV*EGIGDI
Trigger: GATGTCTCCGATGCCTTCCAACACAGTCGATCGACA...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTAGCGAGGCCCCCTTCTaGAAGGATAGCTCACGCGGG +
Preference number: 5 (lower is better)
Translates to: QRPTGHTDLPVCHYPETASEAPF*KDSSRG
Trigger: CCCGCGTGAGCTATCCTTCAAGAAGGGGGCCTCGCT...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTAGTCCATCCACGCCGTaGTGCCGGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRSPSTP*CRPSHQ
Trigger: CTGGTGGGAGGGCCGGCACAACGGCGTGGATGGACT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCGACTGGAGGTCGTTTTaGGAAGAGGCCTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSDWRSF*EEALSS
Trigger: GGATGACAAGGCCTCTTCCAAAAACGACCTCCAGTC...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCTCGGCCTCCAGGGACTaGTGGTCCCCTAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPSASRD*WSPRLL
Trigger: CAGCAGCCTAGGGGACCACAAGTCCCTGGAGGCCGA...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTTCCTCTGGTCGTCTGTaGACACGCGAGAGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGSSGRL*TRERSV
Trigger: CACGGACCTCTCGCGTGTCAACAGACGACCAGAGGA...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCCTTTGGGAGTACAGTaGGCCTTTGGCCTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKPLGVQ*AFGLRV
Trigger: CACCCGGAGGCCAAAGGCCAACTGTACTCCCAAAGG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCACAGGGCACACAGATTaGCCCGTGTGCCATTATCCA +
Preference number: 5 (lower is better)
Translates to: GAAGAPALLWSSVDTREVTGHTD*PVCHYP
Trigger: TGGATAATGGCACACGGGCAAATCTGTGTGCCCTGT...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAAGGCGCGGCGCCTCTTaGGTCGTGCAGCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: LCTLSGVQKALRGEKSLARRGAS*VVQPAP
Trigger: AGGGGCTGGCTGCACGACCAAAGAGGCGCCGCGCCT...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS TCA 90 bp TGCCGCCCCGTGTGCTGGAAGGGCCTTGCCTGGTGTGAATCATCCTaGTGTTTCCAAATTGCCAGAGCCCAGAGGAACAGCTGTACGGGC +
Preference number: 5 (lower is better)
Translates to: CRPVCWKGLAWCESS*CFQIARAQRNSCTG
Trigger: GCCCGTACAGCTGTTCCTCTGGGCTCTGGCAATTTGGAAACATCAGGATGATTCACACCAGGCAAGGCCCTTCCAGCACACGGGGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp CACACAGGCATACACACACACACCCTCACACGCACACACACTCGCTaGATCACTCACACACACACATCCACGAGAGGCGCGGCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: HTGIHTHTLTRTHTR*ITHTHTSTRGAAPL
Trigger: AAGAGGCGCCGCGCCTCTCGTGGATGTGTGTGTGTGAGTGATCCAGCGAGTGTGTGTGCGTGTGAGGGTGTGTGTGTGTATGCCTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS-3UTR CAA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCCCTGGTCAGCTCCTCTaGCAAAAGAAGAATCACCCT +
Preference number: 5 (lower is better)
Translates to: GAAGAPALLWSSVDTREVPGQLL*QKKNHP
Trigger: AGGGTGATTCTTCTTTTGCAAGAGGAGCTGACCAGG...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGCGGGAGCTGCGGATTTaGGAGGAGAAGCGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLRELRI*EEKRSA
Trigger: GGCTGAGCGCTTCTCCTCCAAAATCCGCAGCTCCCG...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAGGTACTGGTCCTTCTaGAACTGGTGCTCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGRYWSF*NWCSRE
Trigger: CTCCCGGGAGCACCAGTTCAAGAAGGACCAGTACCT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGAGGTACTGGTCCTTCTaGAACTGGTGCTCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMRYWSF*NWCSRE
Trigger: CTCCCGGGAGCACCAGTTCAAGAAGGACCAGTACCT...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCAGGTCTCCTGACTTATaGAACTGCTTCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GAAGAPALLWSSVDTREVRSPDL*NCFSSC
Trigger: GCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACCT...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGTCGTCTGTTGACACGCGAGAGGTCCGTGGGATTCCCATGGCTGGACGTGAGCTCCATGACTGTGTGCTaGTCACTTCGGGAATCCAGG +
Preference number: 5 (lower is better)
Translates to: GRLLTRERSVGFPWLDVSSMTVC*SLRESR
Trigger: CCTGGATTCCCGAAGTGACAAGCACACAGTCATGGA...GCTCACGTCCAGCCATGGGAATCCCACGGACCTCTCGCGTGTCAACAGACGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCTGGAGGGCAGAAGACTaGATTGCACATGTCCATGAC +
Preference number: 5 (lower is better)
Translates to: GGVNKGQRWPCGQSQRDSWRAED*IAHVHD
Trigger: GTCATGGACATGTGCAATCAAGTCTTCTGCCCTCCA...GCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGTCAGAGGCAGCCGACTaGACGGACTCTGTCGATCGA +
Preference number: 5 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRSEAAD*TDSVDR
Trigger: TCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGA...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTGCGGACAGGGCTGGCTaGAAGGTGGTCATCATCTCG +
Preference number: 5 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAADRAG*KVVIIS
Trigger: CGAGATGATGACCACCTTCAAGCCAGCCCTGTCCGC...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 90 bp CCTGCACATCTGCCGCCCCGTGTGCTGGAAGGGCCTTGCCTGGTGTaGATCATCCTGATGTTTCCAAATTGCCAGAGCCCAGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: PAHLPPRVLEGPCLV*IILMFPNCQSPEEQ
Trigger: CTGTTCCTCTGGGCTCTGGCAATTTGGAAACATCAGGATGATTCACACCAGGCAAGGCCCTTCCAGCACACGGGGCGGCAGATGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp TTCTCAATCTTCTTCACAGAGCTGCGGCGCTGGGGCCGGTCCTCGTaGCGGAGCAGGTTCATGCTGAGGTCTCCTGACTTATTGAACTGC +
Preference number: 5 (lower is better)
Translates to: FSIFFTELRRWGRSS*RSRFMLRSPDLLNC
Trigger: GCAGTTCAATAAGTCAGGAGACCTCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000470951.5
ENST00000480750.3
ENST00000485983.6
ENST00000618999.4
CDS CCA 90 bp CCTCGGGCAGCAGATGAAAGAAAACACAACTCTCCCACTCTCACCTaGTGGTGCCGCATTCTGCTCTTTCCCCTTCGCCCAGGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: PRAADERKHNSPTLT*WCRILLFPLRPGSA
Trigger: AGCAGACCCTGGGCGAAGGGGAAAGAGCAGAATGCGGCACCACCAGGTGAGAGTGGGAGAGTTGTGTTTTCTTTCATCTGCTGCCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp CTCCTCCCTGCAACACAGGCTGGATGGTTCTATACCTGGCCTTCTTaGGCCAATGCCAGCCAGCCCGCCCAGTGTGCCCATTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: LLPATQAGWFYTWPS*ANASQPAQCAHFIL
Trigger: CAAAATGAAATGGGCACACTGGGCGGGCTGGCTGGCATTGGCCCAAGAAGGCCAGGTATAGAACCATCCAGCCTGTGTTGCAGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491467.1
CDS-3UTR CAA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAAACTCCTGGAGGTCTaGAAGCAGCTGCAGTCGCGA +
Preference number: 5 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGKLLEV*KQLQSR
Trigger: TCGCGACTGCAGCTGCTTCAAGACCTCCAGGAGTTT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTAGGTACTGGTCCTTCTaGAACTGGTGCTCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: QRPTGHTDLPVCHYPETARYWSF*NWCSRE
Trigger: CTCCCGGGAGCACCAGTTCAAGAAGGACCAGTACCT...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTTCAGAGGCAGCCGACTaGACGGACTCTGTCGATCGA +
Preference number: 5 (lower is better)
Translates to: QRPTGHTDLPVCHYPETASEAAD*TDSVDR
Trigger: TCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGA...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGGTGACGAGGATTTGTaGGATCTGGTGCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKGDEDL*DLVHPL
Trigger: GAGAGGGTGCACCAGATCCAACAAATCCTCGTCACC...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTACATCTGGCGCCTGCTaGACCGTGTTCTGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTTSGAC*TVFCLS
Trigger: CGAGAGGCAGAACACGGTCAAGCAGGCGCCAGATGT...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCACATGGTGCCCGACTaGTCCGCTGAGCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERHMVPD*SAELLG
Trigger: CCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCACTAGGTCCCTCCCTTaGGGTGTATTTACCTTTTCG +
Preference number: 5 (lower is better)
Translates to: GAAGAPALLWSSVDTREVTRSLP*GVFTFS
Trigger: CGAAAAGGTAAATACACCCAAAGGGAGGGACCTAGT...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTAGCCAGTGTCAAATCTaGGGCAGGTCACAGCACAGC +
Preference number: 5 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGSQCQI*GRSQHS
Trigger: GCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCT...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCAAAGTATTTTTCCACTaGGCCTGCGTCAAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GAAGAPALLWSSVDTREVKVFFH*ACVKAQ
Trigger: CTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTT...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 90 bp AAGATGTCATTGAGGGTGGCATGGTCTCGGCTCTCCCGCCGGGTCTaGTGCAGAACCAGATACCAACAGTTCACAGGCGAGAGGAGGTAC +
Preference number: 5 (lower is better)
Translates to: KMSLRVAWSRLSRRV*CRTRYQQFTGERRY
Trigger: GTACCTCCTCTCGCCTGTGAACTGTTGGTATCTGGTTCTGCATCAGACCCGGCGGGAGAGCCGAGACCATGCCACCCTCAATGACATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000470951.5
ENST00000618999.4
CDS TCA 90 bp AACTTCTGCCAAGCCCTCCGTCTCCCCATCCTGAGCCCAGGAAACTaGAAACCCCAGAGGTTGCCAAGACTTTGCCCAACTCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: NFCQALRLPILSPGN*KPQRLPRLCPTPFP
Trigger: TGGGAAGGGAGTTGGGCAAAGTCTTGGCAACCTCTGGGGTTTTCAGTTTCCTGGGCTCAGGATGGGGAGACGGAGGGCTTGGCAGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp CGCGACTCTGATTGCTGCTCCAGACATTTGAACTGCTCCACCAGCTaGGTGCGGATCTTTCAGTCCCACGTAGAGGACAGGCTCCGATGT +
Preference number: 5 (lower is better)
Translates to: RDSDCCSRHLNCSTS*VRIFQSHVEDRLRC
Trigger: ACATCGGAGCCTGTCCTCTACGTGGGACTGAAAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433332.7
CDS GCA 90 bp TGCAACACAGGCTGGATGGTTCTATACCTGGCCTTCTTGGGCCAATaGCAGCCAGCCCGCCCAGTGTGCCCATTTCATTTTGTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: CNTGWMVLYLAFLGQ*QPARPVCPFHFVGN
Trigger: GTTCCCCACAAAATGAAATGGGCACACTGGGCGGGCTGGCTGGCATTGGCCCAAGAAGGCCAGGTATAGAACCATCCAGCCTGTGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491467.1
CDS CCA 90 bp CAGCAAAGGACCTGGTGTCCAGGAGGGTACTTGGGAAGTTGCCATTaGATATACAACTGCCCAAGCCAACTGCACTGGGGCCACCAGAGG +
Preference number: 5 (lower is better)
Translates to: QQRTWCPGGYLGSCH*IYNCPSQLHWGHQR
Trigger: CCTCTGGTGGCCCCAGTGCAGTTGGCTTGGGCAGTTGTATATCCAATGGCAACTTCCCAAGTACCCTCCTGGACACCAGGTCCTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS-3UTR CAA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGAATGGCTCTAGTAGCTaGCCCTGGTCAGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKNGSSS*PWSAPL
Trigger: AAGAGGAGCTGACCAGGGCAAGCTACTAGAGCCATT...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGTGCTGCTCCAGACATTaGAACTGCTCCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMCCSRH*NCSTSC
Trigger: GCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCA...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGTTCATGAAGATGTCATaGAGGGTGGCATGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: FHLACVKAQIWGWMSGETFMKMS*RVAWSR
Trigger: CCGAGACCATGCCACCCTCAATGACATCTTCATGAA...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGCTGCTGGAGCTCCAGCACTCCTCTGGTCGTCTGTTGACACGCGAGAGGTCTTTGTGCATTTCAGCTaGTTCTCAGAGTACTTGGCC +
Preference number: 5 (lower is better)
Translates to: GAAGAPALLWSSVDTREVFVHFS*FSEYLA
Trigger: GGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAA...GACCTCTCGCGTGTCAACAGACGACCAGAGGAGTGCTGGAGCTCCAGCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGTTGCTTATAGCTGCGTaGGTGGCTGCCAGATTGAGC +
Preference number: 5 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKLLIAA*VAARLS
Trigger: GCTCAATCTGGCAGCCACCAACGCAGCTATAAGCAA...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGTTGCTTATAGCTGCGTaGGTGGCTGCCAGATTGAGC +
Preference number: 5 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMLLIAA*VAARLS
Trigger: GCTCAATCTGGCAGCCACCAACGCAGCTATAAGCAA...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGCTTCGGGAATCCAGGTaGTCCACTGCATTCTCAATG +
Preference number: 5 (lower is better)
Translates to: FHLACVKAQIWGWMSGETLRESR*STAFSM
Trigger: CATTGAGAATGCAGTGGACAACCTGGATTCCCGAAG...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTGGCTGGAACTCGAACTaGAGTGGAGGGCAGAAGACT +
Preference number: 5 (lower is better)
Translates to: QRPTGHTDLPVCHYPETAGWNSN*SGGQKT
Trigger: AGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCC...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGTGTCGATCGACTGTGTaGGAAGGCATCGGAGACATC +
Preference number: 5 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMCRSTV*EGIGDI
Trigger: GATGTCTCCGATGCCTTCCAACACAGTCGATCGACA...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGGAGTACAGTTGGCCTTaGGCCTCCGGGTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWEYSWP*ASGWKG
Trigger: GCCCTTCCACCCGGAGGCCAAAGGCCAACTGTACTC...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGCCAGGACCTGGCCTATaGGCCATTAAGAGTCACTCG +
Preference number: 5 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMPGPGL*AIKSHS
Trigger: CGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTGG...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGGGTTCTCTGCCTGATTaGACCTTTGAGGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMGSLPD*TFEACW
Trigger: CCAGCAGGCCTCAAAGGTCAAATCAGGCAGAGAACC...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS GCA 90 bp GAGAGGTCTCCAGGTTGTATTCAGCTGAGAGATAGGTCCGGAAGGTaGGGGCCAGGCTGGCATGGAAGCCCAAATCACAGCAATCGATCA +
Preference number: 5 (lower is better)
Translates to: ERSPGCIQLRDRSGR*GPGWHGSPNHSNRS
Trigger: TGATCGATTGCTGTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000485983.6
ENST00000618999.4
CDS GCA 90 bp CAAACCCAGCAAAGGACCTGGTGTCCAGGAGGGTACTTGGGAAGTTaGCATTGGATATACAACTGCCCAAGCCAACTGCACTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: QTQQRTWCPGGYLGS*HWIYNCPSQLHWGH
Trigger: GTGGCCCCAGTGCAGTTGGCTTGGGCAGTTGTATATCCAATGGCAACTTCCCAAGTACCCTCCTGGACACCAGGTCCTTTGCTGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 90 bp TCACAGTGTTCTTTCTCCCAGTCTGCTTGTCCCTGTGGCGTGTCCTaGACAGCGGGTACTCGGGAGTCAGTGTTCCGTTCTCCATTTGCT +
Preference number: 5 (lower is better)
Translates to: SQCSFSQSACPCGVS*TAGTRESVFRSPFA
Trigger: AGCAAATGGAGAACGGAACACTGACTCCCGAGTACCCGCTGTGCAGGACACGCCACAGGGACAAGCAGACTGGGAGAAAGAACACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 90 bp GACTTGGAGGTCAACATCCCAAATGGTGGCAATGCTGTAGGGCAATaGCAGTCGGGCCCTTGGAGGCTATTCATGGGCTGTGTACTGCGT +
Preference number: 5 (lower is better)
Translates to: DLEVNIPNGGNAVGQ*QSGPWRLFMGCVLR
Trigger: ACGCAGTACACAGCCCATGAATAGCCTCCAAGGGCCCGACTGGCATTGCCCTACAGCATTGCCACCATTTGGGATGTTGACCTCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp GTCAGTCTAATGCTAGAACAAGCAAAGCAGCAACTGTGCCTCACCTaGGCACACCCACACCGGCCCTTGGGGACATTGGTGAAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: VSLMLEQAKQQLCLT*AHPHRPLGTLVKKP
Trigger: TGGCTTCTTCACCAATGTCCCCAAGGGCCGGTGTGGGTGTGCCCAGGTGAGGCACAGTTGCTGCTTTGCTTGTTCTAGCATTAGACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTGCTGCTCCAGACATTaGAACTGCTCCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GTRAWAETLARIYFRLRKCCSRH*NCSTSC
Trigger: GCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGGCCCCTGGCTCGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCTTCGGGAATCCAGGTaGTCCACTGCATTCTCAATG +
Preference number: 5 (lower is better)
Translates to: MAPGSLCGLSQYSSPPAMLRESR*STAFSM
Trigger: CATTGAGAATGCAGTGGACAACCTGGATTCCCGAAG...CATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTAGGCTGGAACTCGAACTaGAGTGGAGGGCAGAAGACT +
Preference number: 5 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLGWNSN*SGGQKT
Trigger: AGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCC...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGTCCTCATTCTCTATCTaGAGGGTGGCCAGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMSSFSI*RVASLD
Trigger: GTCCAGACTGGCCACCCTCAAGATAGAGAATGAGGA...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTCAGAGGCAGCCGACTaGACGGACTCTGTCGATCGA +
Preference number: 5 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDSEAAD*TDSVDR
Trigger: TCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAATCGCCCAGGGTCTGCTaGAGTAAATCGTGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQSPRVC*SKSCLA
Trigger: GGCCAAGCACGATTTACTCAAGCAGACCCTGGGCGA...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGAAGGGTGACGAGGATTaGTTGGATCTGGTGCACCCT +
Preference number: 5 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMKGDED*LDLVHP
Trigger: AGGGTGCACCAGATCCAACAAATCCTCGTCACCCTT...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGGTTTTGATGACTTCATaGATGTGTGCCTGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: FHLACVKAQIWGWMSGETVLMTS*MCAWQD
Trigger: GTCCTGCCAGGCACACATCAATGAAGTCATCAAAAC...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGGCCCCTGGCTTGCTTTaGAAGGCTCTGCTAAGTCGA +
Preference number: 5 (lower is better)
Translates to: GTRAWAETLARIYFRLRKAPGLL*KALLSR
Trigger: TCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGC...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CAA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCAGCCAGCCCCTGGCTaGCTTTTGAAGGCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERQPAPG*LLKALL
Trigger: TAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CAA 90 bp GTCCAGAGAAGCCTTCTGCCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGTCCAGTTCTCTTCTCTaGCCATCTCCTGGGACACTT +
Preference number: 5 (lower is better)
Translates to: VQRSLLPISPRSFIAGMRSSSLL*PSPGTL
Trigger: AAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGA...CCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGGCAGAAGGCTTCTCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS GCA 90 bp ATGGGTTCGTTTCTAAAAGGTTCTTCGAAAGTGACCCTGCACATCTaGCGCCCCGTGTGCTGGAAGGGCCTTGCCTGGTGTGAATCATCC +
Preference number: 5 (lower is better)
Translates to: MGSFLKGSSKVTLHI*RPVCWKGLAWCESS
Trigger: GGATGATTCACACCAGGCAAGGCCCTTCCAGCACACGGGGCGGCAGATGTGCAGGGTCACTTTCGAAGAACCTTTTAGAAACGAACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp TGTGAAGGAGAACTGACAGAGCTGGAGCCCAAACCCAGGACTCTTTaGCTCCAAGTTCAGGGCTTTTCCTACCAGGCCACCATCATGGAG +
Preference number: 5 (lower is better)
Translates to: CEGELTELEPKPRTL*LQVQGFSYQATIME
Trigger: CTCCATGATGGTGGCCTGGTAGGAAAAGCCCTGAACTTGGAGCCAAAGAGTCCTGGGTTTGGGCTCCAGCTCTGTCAGTTCTCCTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTAAACTCCTGGAGGTCTaGAAGCAGCTGCAGTCGCGA +
Preference number: 5 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRKLLEV*KQLQSR
Trigger: TCGCGACTGCAGCTGCTTCAAGACCTCCAGGAGTTT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACGGGAGCTGCGGATTTaGGAGGAGAAGCGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: MSGETSAICVCTSLNVNSRELRI*EEKRSA
Trigger: GGCTGAGCGCTTCTCCTCCAAAATCCGCAGCTCCCG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGTGCAGGCCAATCTCCTaGCTCTTTTTGAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKCRPIS*LFLKSL
Trigger: CAGACTCTTCAAAAAGAGCAAGGAGATTGGCCTGCA...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTTTGCTTATAGCTGCGTaGGTGGCTGCCAGATTGAGC +
Preference number: 5 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTLLIAA*VAARLS
Trigger: GCTCAATCTGGCAGCCACCAACGCAGCTATAAGCAA...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTATCCATGACTGTGTGCTaGTCACTTCGGGAATCCAGG +
Preference number: 5 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLSMTVC*SLRESR
Trigger: CCTGGATTCCCGAAGTGACAAGCACACAGTCATGGA...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGGCTGGAACTCGAACTaGAGTGGAGGGCAGAAGACT +
Preference number: 5 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRGWNSN*SGGQKT
Trigger: AGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGTACTGGGAGAGGTGGTaGAGGAAAGCGAAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMYWERW*RKAKRY
Trigger: ATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGTA...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp AGCCCAGCAGGGGCTAACCCCATGGTTGTGAGCCAGCCACTCTTCTTTCTGGGTGTTTTGATGACTTCATaGATGTGTGCCTGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SPAGANPMVVSQPLFFLGVLMTS*MCAWQD
Trigger: GTCCTGCCAGGCACACATCAATGAAGTCATCAAAAC...ACCCAGAAAGAAGAGTGGCTGGCTCACAACCATGGGGTTAGCCCCTGCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATTTGTCCGCTGAGCTGTaGGGGAACATCTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDLSAEL*GNIFSV
Trigger: CACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAA...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGCTCCCCTGGGCAGCTTaGGATATGTGGGGAATGTTC +
Preference number: 5 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERLPWAA*DMWGMF
Trigger: GAACATTCCCCACATATCCAAAGCTGCCCAGGGGAG...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 90 bp CCCATTTTACAGAGGCAGAGACTGAAGCCTCCTGTGAAGGAGAACTaGCAGAGCTGGAGCCCAAACCCAGGACTCTTTGGCTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: PILQRQRLKPPVKEN*QSWSPNPGLFGSKF
Trigger: GAACTTGGAGCCAAAGAGTCCTGGGTTTGGGCTCCAGCTCTGTCAGTTCTCCTTCACAGGAGGCTTCAGTCTCTGCCTCTGTAAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 90 bp ACCATGGTAGGACACAAGGCCCCTGACTCTCCGCTTTCAGCTTACTaGAGATCCTCAAAACCAACAGCACACAGCTTCCAGCGCATGCTC +
Preference number: 5 (lower is better)
Translates to: TMVGHKAPDSPLSAY*RSSKPTAHSFQRML
Trigger: GAGCATGCGCTGGAAGCTGTGTGCTGTTGGTTTTGAGGATCTTCAGTAAGCTGAAAGCGGAGAGTCAGGGGCCTTGTGTCCTACCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS GCA 90 bp GTCCTGCACAGCGGGTACTCGGGAGTCAGTGTTCCGTTCTCCATTTaGTTAAGCTGCCCGATTTCTCCCGAGATAACTTCCCCACACAAA +
Preference number: 5 (lower is better)
Translates to: VLHSGYSGVSVPFSI*LSCPISPEITSPHK
Trigger: TTTGTGTGGGGAAGTTATCTCGGGAGAAATCGGGCAGCTTAAGCAAATGGAGAACGGAACACTGACTCCCGAGTACCCGCTGTGCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CCA 90 bp GGTTGTATTCAGCTGAGAGATAGGTCCGGAAGGTGCGGGCCAGGCTaGCATGGAAGCCCAAATCACAGCAATCGATCAGATCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: GCIQLRDRSGRCGPG*HGSPNHSNRSDQRH
Trigger: ATGTCTCTGATCTGATCGATTGCTGTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000485983.6
ENST00000618999.4
CDS CCA 90 bp CTCATGACCACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTTaGATCTGGTGCACCCTCTCGGCTGGGTTCTCCAGTTTAATAGTA +
Preference number: 5 (lower is better)
Translates to: LMTTMTTRGRVTRIC*IWCTLSAGFSSLIV
Trigger: TACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000475560.5
CDS CCA 90 bp GAACCCCTCAAACCCAGCAAAGGACCTGGTGTCCAGGAGGGTACTTaGGAAGTTGCCATTGGATATACAACTGCCCAAGCCAACTGCACT +
Preference number: 5 (lower is better)
Translates to: EPLKPSKGPGVQEGT*EVAIGYTTAQANCT
Trigger: AGTGCAGTTGGCTTGGGCAGTTGTATATCCAATGGCAACTTCCCAAGTACCCTCCTGGACACCAGGTCCTTTGCTGGGTTTGAGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTAATGGCTCTAGTAGCTaGCCCTGGTCAGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRNGSSS*PWSAPL
Trigger: AAGAGGAGCTGACCAGGGCAAGCTACTAGAGCCATT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCTGGGTTCTCCAGTTCTCTTCTCTTGCCATCTCCTGGGACACTTTCCTGGCTGTTCATGAAGATGTCATaGAGGGTGGCATGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: AGFSSSLLLPSPGTLSWLFMKMS*RVAWSR
Trigger: CCGAGACCATGCCACCCTCAATGACATCTTCATGAA...CAGCCAGGAAAGTGTCCCAGGAGATGGCAAGAGAAGAGAACTGGAGAACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGGGTGACGAGGATTTGTaGGATCTGGTGCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWGDEDL*DLVHPL
Trigger: GAGAGGGTGCACCAGATCCAACAAATCCTCGTCACC...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCCCGGAAGGGCTTTACTaGGCCAAGAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLPEGLY*AKRQRP
Trigger: AGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCGG...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGGAGGTCAGGAGGGCTaGGACCTGACAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIGGQEG*DLTAKS
Trigger: GGACTTTGCTGTCAGGTCCAAGCCCTCCTGACCTCC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGGAACAGCTTTGTTATaGGCCGGGGACAACTCACAC +
Preference number: 5 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRGTALL*AGDNSH
Trigger: GTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCGTTCAAGGAACAGCTTaGTTATTGGCCGGGGACAAC +
Preference number: 5 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPVQGTA*LLAGDN
Trigger: GTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAAC...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGAAGTCGATGGTCAGGTaGCCAAAGGGCCGGTCATCT +
Preference number: 5 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWKSMVR*PKGRSS
Trigger: AGATGACCGGCCCTTTGGCAACCTGACCATCGACTT...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAGAGCACAGTGACCCCTaGACTGTCTCTGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIEHSDP*TVSAAH
Trigger: GTGAGCTGCAGAGACAGTCAAGGGGTCACTGTGCTC...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS TCA 90 bp AGGAGCAGGAGAGAGTTGGGAGTTCATCTTTGCTCTTGCCAAACATaGGGGCTTCCCAGGATTTGGGGCCACTGGAAAGCATTTGTGGGA +
Preference number: 5 (lower is better)
Translates to: RSRRELGVHLCSCQT*GLPRIWGHWKAFVG
Trigger: TCCCACAAATGCTTTCCAGTGGCCCCAAATCCTGGGAAGCCCTCATGTTTGGCAAGAGCAAAGATGAACTCCCAACTCTCTCCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp AGCGGGTACTCGGGAGTCAGTGTTCCGTTCTCCATTTGCTTAAGCTaGCCGATTTCTCCCGAGATAACTTCCCCACACAAAGCTGATCTG +
Preference number: 5 (lower is better)
Translates to: SGYSGVSVPFSICLS*PISPEITSPHKADL
Trigger: CAGATCAGCTTTGTGTGGGGAAGTTATCTCGGGAGAAATCGGGCAGCTTAAGCAAATGGAGAACGGAACACTGACTCCCGAGTACCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CCA 90 bp ACCACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTTGGATCTaGTGCACCCTCTCGGCTGGGTTCTCCAGTTTAATAGTAGATATC +
Preference number: 5 (lower is better)
Translates to: TTMTTRGRVTRICWI*CTLSAGFSSLIVDI
Trigger: GATATCTACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000475560.5
CDS-3UTR CAA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGGAAAAATCTCTTTACTaGCCGAGAAATGGCTCTAGT +
Preference number: 5 (lower is better)
Translates to: FHLACVKAQIWGWMSGETEKSLY*PRNGSS
Trigger: ACTAGAGCCATTTCTCGGCAAGTAAAGAGATTTTTC...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTTCATGAAGATGTCATaGAGGGTGGCATGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRFMKMS*RVAWSR
Trigger: CCGAGACCATGCCACCCTCAATGACATCTTCATGAA...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTAGATATCTCGTTCATTTaGATCGTCCACAAGGGGGTC +
Preference number: 5 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLDISFI*IVHKGV
Trigger: GACCCCCTTGTGGACGATCAAAATGAACGAGATATC...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTTTGTCCGCTGAGCTGTaGGGGAACATCTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGLSAEL*GNIFSV
Trigger: CACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAA...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATTCCTCTGGTCGTCTGTaGACACGCGAGAGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNSSGRL*TRERSV
Trigger: CACGGACCTCTCGCGTGTCAACAGACGACCAGAGGA...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCCGGAAGGGCTTTACTaGGCCAAGAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIPEGLY*AKRQRP
Trigger: AGGCCTTTGCCTCTTGGCCAAGTAAAGCCCTTCCGG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTGGCAGTTGTGGCAGATaGCTATATTTTGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: AHRAHRFARVPLSRNSSSGSCGR*LYFAWE
Trigger: CTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC...AGATGAGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCACGCAATTCCCTCCGATaGTGCACTCTGTCCGGGGTT +
Preference number: 5 (lower is better)
Translates to: MSGETSAICVCTSLNVNSRNSLR*CTLSGV
Trigger: AACCCCGGACAGAGTGCACAATCGGAGGGAATTGCG...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTGAAACCTTTCATCCCTaGGGAATCCATCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTETFHP*GIHLSP
Trigger: AGGAGAGAGATGGATTCCCAAGGGATGAAAGGTTTC...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGGGAGGTCAGGAGGGCTaGGACCTGACAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKGGQEG*DLTAKS
Trigger: GGACTTTGCTGTCAGGTCCAAGCCCTCCTGACCTCC...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGGGACACGCACACAGTaGTGCTGTGCACACAGGCAT +
Preference number: 5 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIGTRTQ*CCAHRH
Trigger: ATGCCTGTGTGCACAGCACAACTGTGTGCGTGTCCC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS TCA 90 bp CTCAACTTTCCCCTGAGGGAAGACCCTGAGACCTGGCCAAGTGTTTaGTTACAGATCTCCTCTCCCACACTCTGCTGGAACAAACTTCTC +
Preference number: 5 (lower is better)
Translates to: LNFPLREDPETWPSV*LQISSPTLCWNKLL
Trigger: GAGAAGTTTGTTCCAGCAGAGTGTGGGAGAGGAGATCTGTAATCAAACACTTGGCCAGGTCTCAGGGTCTTCCCTCAGGGGAAAGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 90 bp GCCCTTGGAGGCTATTCATGGGCTGTGTACTGCGTTGCATCTGCCTaGACAAGATCTCAAGTGATTTCACCTCTAATCCAGACCACGAGG +
Preference number: 5 (lower is better)
Translates to: ALGGYSWAVYCVASA*TRSQVISPLIQTTR
Trigger: CCTCGTGGTCTGGATTAGAGGTGAAATCACTTGAGATCTTGTTCAGGCAGATGCAACGCAGTACACAGCCCATGAATAGCCTCCAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp TCGGGCCCTTGGAGGCTATTCATGGGCTGTGTACTGCGTTGCATCTaGCTGAACAAGATCTCAAGTGATTTCACCTCTAATCCAGACCAC +
Preference number: 5 (lower is better)
Translates to: SGPWRLFMGCVLRCI*LNKISSDFTSNPDH
Trigger: GTGGTCTGGATTAGAGGTGAAATCACTTGAGATCTTGTTCAGGCAGATGCAACGCAGTACACAGCCCATGAATAGCCTCCAAGGGCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp TGCCAGTCGGGCCCTTGGAGGCTATTCATGGGCTGTGTACTGCGTTaGATCTGCCTGAACAAGATCTCAAGTGATTTCACCTCTAATCCA +
Preference number: 5 (lower is better)
Translates to: CQSGPWRLFMGCVLR*ICLNKISSDFTSNP
Trigger: TGGATTAGAGGTGAAATCACTTGAGATCTTGTTCAGGCAGATGCAACGCAGTACACAGCCCATGAATAGCCTCCAAGGGCCCGACTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp TCTGAAAGGGAAGTAAAGTCAGCCCCTGGGCTATCAGCTGCTGAGTaGAAAGTGTTCACTGGCTCTGGTCTGCTCAGGAAAAAGCGCAAA +
Preference number: 5 (lower is better)
Translates to: SEREVKSAPGLSAAE*KVFTGSGLLRKKRK
Trigger: TTTGCGCTTTTTCCTGAGCAGACCAGAGCCAGTGAACACTTTCCACTCAGCAGCTGATAGCCCAGGGGCTGACTTTACTTCCCTTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp TCATTTCACCACACAAGTTGGCCTGACTCAATGGTGCCAGCCTTCTaGGGCAAAGGCCTTTTGAAGGTTAAGAAGAGGGCCCCTAACCAA +
Preference number: 5 (lower is better)
Translates to: SFHHTSWPDSMVPAF*GKGLLKVKKRAPNQ
Trigger: TTGGTTAGGGGCCCTCTTCTTAACCTTCAAAAGGCCTTTGCCCCAGAAGGCTGGCACCATTGAGTCAGGCCAACTTGTGTGGTGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACAAAACTCCTGGAGGTCTaGAAGCAGCTGCAGTCGCGA +
Preference number: 5 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTKLLEV*KQLQSR
Trigger: TCGCGACTGCAGCTGCTTCAAGACCTCCAGGAGTTT...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCAGGTCTCCTGACTTATaGAACTGCTTCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACRSPDL*NCFSSC
Trigger: GCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACCT...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATAGTCATTCCGGGCCTTaGTGCATTTCAGCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDSHSGP*CISACS
Trigger: AGAACAAGCTGAAATGCACAAAGGCCCGGAATGACT...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCACTTCGGGAATCCAGGTaGTCCACTGCATTCTCAATG +
Preference number: 5 (lower is better)
Translates to: LCTLSGVQKALRGEKSLALRESR*STAFSM
Trigger: CATTGAGAATGCAGTGGACAACCTGGATTCCCGAAG...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGTGGAGGGCAGAAGACTaGATTGCACATGTCCATGAC +
Preference number: 5 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWWRAED*IAHVHD
Trigger: GTCATGGACATGTGCAATCAAGTCTTCTGCCCTCCA...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGTTGAGTAAATCGTGCTaGGCCTGCAGCTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWLSKSC*ACSLVM
Trigger: CATCACCAAGCTGCAGGCCAAGCACGATTTACTCAA...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTGATATCTCGTTCATTTaGATCGTCCACAAGGGGGTC +
Preference number: 5 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRDISFI*IVHKGV
Trigger: GACCCCCTTGTGGACGATCAAAATGAACGAGATATC...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACAGGTGACGAGGATTTGTaGGATCTGGTGCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTGDEDL*DLVHPL
Trigger: GAGAGGGTGCACCAGATCCAACAAATCCTCGTCACC...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCATACTGGGAGAGGTGGTaGAGGAAAGCGAAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAYWERW*RKAKRY
Trigger: ATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGTA...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCACAGGGCACACAGATTaGCCCGTGTGCCATTATCCA +
Preference number: 5 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLTGHTD*PVCHYP
Trigger: TGGATAATGGCACACGGGCAAATCTGTGTGCCCTGT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGACATGCACTGAATGCCACATCACGACCAGGTCACGAGAAGTCCTCCACATTCACTAGGTCCCTCCCTTaGGGTGTATTTACCTTTTCG +
Preference number: 5 (lower is better)
Translates to: GHALNATSRPGHEKSSTFTRSLP*GVFTFS
Trigger: CGAAAAGGTAAATACACCCAAAGGGAGGGACCTAGT...GAATGTGGAGGACTTCTCGTGACCTGGTCGTGATGTGGCATTCAGTGCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CGGGAAAGTATTTTTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGCAGATTGCTATATTTaGCCTGGGAGGCTACTGGAT +
Preference number: 5 (lower is better)
Translates to: RESIFPLGLRQGSDLGLDADCYI*PGRLLD
Trigger: ATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGC...ATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACCGCAATTCCCTCCGATaGTGCACTCTGTCCGGGGTT +
Preference number: 5 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANRNSLR*CTLSGV
Trigger: AACCCCGGACAGAGTGCACAATCGGAGGGAATTGCG...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGGAAACCTTTCATCCCTaGGGAATCCATCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERETFHP*GIHLSP
Trigger: AGGAGAGAGATGGATTCCCAAGGGATGAAAGGTTTC...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TTCCACTTGGCCTGCGTCAAGGCTCAGATCTGGGGCTGGATGAGTGGGGAGACGTCAGAATCAAACCTATaGCCAAACCATGTAAACAGT +
Preference number: 5 (lower is better)
Translates to: FHLACVKAQIWGWMSGETSESNL*PNHVNS
Trigger: ACTGTTTACATGGTTTGGCAATAGGTTTGATTCTGA...CGTCTCCCCACTCATCCAGCCCCAGATCTGAGCCTTGACGCAGGCCAAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CCCATCAGCCCGAGGAGCTTCATCGCTGGTATGAGGCTCAGTGCCATTGTCATGGTTGGTACAGAATCTTaGAGACAAGAAAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: PISPRSFIAGMRLSAIVMVGTES*RQERQQ
Trigger: CTGTTGCCTTTCTTGTCTCAAAGATTCTGTACCAAC...CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGCTCCTCGGGCTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS GCA 90 bp ACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTTGGATCTGGTaGACCCTCTCGGCTGGGTTCTCCAGTTTAATAGTAGATATCAAA +
Preference number: 5 (lower is better)
Translates to: TMTTRGRVTRICWIW*TLSAGFSSLIVDIK
Trigger: TTTGATATCTACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000475560.5
CDS GCA 90 bp CTGGGCTATCAGCTGCTGAGTGGAAAGTGTTCACTGGCTCTGGTCTaGTCAGGAAAAAGCGCAAAAGGGAATGTTGAACAAGCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LGYQLLSGKCSLALV*SGKSAKGNVEQAEE
Trigger: CTCTTCAGCTTGTTCAACATTCCCTTTTGCGCTTTTTCCTGAGCAGACCAGAGCCAGTGAACACTTTCCACTCAGCAGCTGATAGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp AGGGGTAACCACACCACAGTTCACCAGAGAAACAGCCACAAACACTaGACCCGTTTCCAGAATTGCTCACCATGCATATACCTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: RGNHTTVHQRNSHKH*TRFQNCSPCIYLCW
Trigger: CCAACACAGGTATATGCATGGTGAGCAATTCTGGAAACGGGTCCAGTGTTTGTGGCTGTTTCTCTGGTGAACTGTGGTGTGGTTACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp TCCGATTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTAGGCGGACGATGACATaGTTCATGAAGATGTCATTG +
Preference number: 5 (lower is better)
Translates to: SDCALCPGFKRRFEVRNRRRTMT*FMKMSL
Trigger: CAATGACATCTTCATGAACAATGTCATCGTCCGCCT...ACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAATCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACTGCAGGCCAATCTCCTaGCTCTTTTTGAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHCRPIS*LFLKSL
Trigger: CAGACTCTTCAAAAAGAGCAAGGAGATTGGCCTGCA...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATCCATGACTGTGTGCTaGTCACTTCGGGAATCCAGG +
Preference number: 5 (lower is better)
Translates to: MSGETSAICVCTSLNVNSSMTVC*SLRESR
Trigger: CCTGGATTCCCGAAGTGACAAGCACACAGTCATGGA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACTCCTCATTCTCTATCTaGAGGGTGGCCAGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDSSFSI*RVASLD
Trigger: GTCCAGACTGGCCACCCTCAAGATAGAGAATGAGGA...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATGTCGATCGACTGTGTaGGAAGGCATCGGAGACATC +
Preference number: 5 (lower is better)
Translates to: MSGETSAICVCTSLNVNSCRSTV*EGIGDI
Trigger: GATGTCTCCGATGCCTTCCAACACAGTCGATCGACA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TGCGGGAGAAGCCATGTGGTATTTTGCCTCCATGTTAGGGAATGCTGTGGTTGGGATATCTCGTTCATTTaGATCGTCCACAAGGGGGTC +
Preference number: 5 (lower is better)
Translates to: CGRSHVVFCLHVRECCGWDISFI*IVHKGV
Trigger: GACCCCCTTGTGGACGATCAAAATGAACGAGATATC...CCAACCACAGCATTCCCTAACATGGAGGCAAAATACCACATGGCTTCTCCCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCAAGGGTGACGAGGATTaGTTGGATCTGGTGCACCCT +
Preference number: 5 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIKGDED*LDLVHP
Trigger: AGGGTGCACCAGATCCAACAAATCCTCGTCACCCTT...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCTACTGGGAGAGGTGGTaGAGGAAAGCGAAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLYWERW*RKAKRY
Trigger: ATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGTA...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATCACATGGTGCCCGACTaGTCCGCTGAGCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYHMVPD*SAELLG
Trigger: CCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTG...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TTGTGCACTCTGTCCGGGGTTCAAAAGGCGCTTCGAGGTGAGAAATCGTTAGCAAAAGTATTTTTCCACTaGGCCTGCGTCAAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: LCTLSGVQKALRGEKSLAKVFFH*ACVKAQ
Trigger: CTGAGCCTTGACGCAGGCCAAGTGGAAAAATACTTT...TGCTAACGATTTCTCACCTCGAAGCGCCTTTTGAACCCCGGACAGAGTGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCCGGGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGCTTCCCCTTGTACAATaGGTTATATTGAAGACTACT +
Preference number: 5 (lower is better)
Translates to: AGNKGLGRNPSQDLLPSKLPLVQ*VILKTT
Trigger: AGTAGTCTTCAATATAACCAATTGTACAAGGGGAAG...CTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGCTCCCCTGGGCAGCTTaGGATATGTGGGGAATGTTC +
Preference number: 5 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKLPWAA*DMWGMF
Trigger: GAACATTCCCCACATATCCAAAGCTGCCCAGGGGAG...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGTTCAAGGAACAGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGTTCAAGGAACAGCTTaGTTATTGGCCGGGGACAAC +
Preference number: 5 (lower is better)
Translates to: GSRNSFVIGRGQLTQKGGVQGTA*LLAGDN
Trigger: GTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAAC...ACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCCTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGAACAAGGGCCTGGGCAGAAACCCTAGCCAGGATCTACTTCCGTCTAAGGAAGTTTTCCTGTCACAATTaGGGGAGGAAGGAAACCAAA +
Preference number: 5 (lower is better)
Translates to: GTRAWAETLARIYFRLRKFSCHN*GRKETK
Trigger: TTTGGTTTCCTTCCTCCCCAAATTGTGACAGGAAAA...CTTCCTTAGACGGAAGTAGATCCTGGCTAGGGTTTCTGCCCAGGCCCTTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTCCTAGCCAGTGTCAAATCTTGGGCAGGTCACAGCACAGCCCAAGGCCTTACTTTTTCCTGTCACAATTaGGGGAGGAAGGAAACCAAA +
Preference number: 5 (lower is better)
Translates to: LLASVKSWAGHSTAQGLTFSCHN*GRKETK
Trigger: TTTGGTTTCCTTCCTCCCCAAATTGTGACAGGAAAA...AGTAAGGCCTTGGGCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACAACCCATGCCATAATTaGCTTGGTGCTGTCATTCCC +
Preference number: 5 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHNPCHN*LGAVIP
Trigger: GGGAATGACAGCACCAAGCAAATTATGGCATGGGTT...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CCTCTCTCCTTTTCCATGGTCCTAGGCTCCCAGGACCTGGCCTATTGGCCATTAAGGAAGGATGTCTGTTaGATACAGAGTCCATTGATG +
Preference number: 5 (lower is better)
Translates to: PLSFSMVLGSQDLAYWPLRKDVC*IQSPLM
Trigger: CATCAATGGACTCTGTATCAAACAGACATCCTTCCT...TAATGGCCAATAGGCCAGGTCCTGGGAGCCTAGGACCATGGAAAAGGAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS TCA 90 bp ATACCTGTGTTGGCTTATTTGCTCATTTCACCACACAAGTTGGCCTaGCTCAATGGTGCCAGCCTTCTGGGGCAAAGGCCTTTTGAAGGT +
Preference number: 5 (lower is better)
Translates to: IPVLAYLLISPHKLA*LNGASLLGQRPFEG
Trigger: ACCTTCAAAAGGCCTTTGCCCCAGAAGGCTGGCACCATTGAGTCAGGCCAACTTGTGTGGTGAAATGAGCAAATAAGCCAACACAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp TGCATATACCTGTGTTGGCTTATTTGCTCATTTCACCACACAAGTTaGCCTGACTCAATGGTGCCAGCCTTCTGGGGCAAAGGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: CIYLCWLICSFHHTS*PDSMVPAFWGKGLL
Trigger: CAAAAGGCCTTTGCCCCAGAAGGCTGGCACCATTGAGTCAGGCCAACTTGTGTGGTGAAATGAGCAAATAAGCCAACACAGGTATATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCCCTGGTCAGCTCCTCTaGCAAAAGAAGAATCACCCT +
Preference number: 5 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIPGQLL*QKKNHP
Trigger: AGGGTGATTCTTCTTTTGCAAGAGGAGCTGACCAGG...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGGCAAAGACCTGGACTCATGGTTCTCTGCCTGATTTGACCTTTGAGGCCTGCAGGCGGACGATGACATaGTTCATGAAGATGTCATTG +
Preference number: 5 (lower is better)
Translates to: MAKTWTHGSLPDLTFEACRRTMT*FMKMSL
Trigger: CAATGACATCTTCATGAACAATGTCATCGTCCGCCT...GCAGGCCTCAAAGGTCAAATCAGGCAGAGAACCATGAGTCCAGGTCTTTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CCCCGTCTCTACACACAAACACAAGGATGTGGTAGTCAGGGGTCTTCTCGCCAAATCTCCTTGCTCTTTTaGAAGAGTCTGATGACATCC +
Preference number: 5 (lower is better)
Translates to: PRLYTQTQGCGSQGSSRQISLLF*KSLMTS
Trigger: GGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGAT...TTGGCGAGAAGACCCCTGACTACCACATCCTTGTGTTTGTGTGTAGAGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGGGGAGGGAAGGGAAGCTATGTCACTTGTATTAACTCAACTGACAGTGTCCTCAGTCATTCCGGGCCTTaGTGCATTTCAGCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: GGGKGSYVTCINSTDSVLSHSGP*CISACS
Trigger: AGAACAAGCTGAAATGCACAAAGGCCCGGAATGACT...GAGGACACTGTCAGTTGAGTTAATACAAGTGACATAGCTTCCCTTCCCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGATGGAGGGCAGAAGACTaGATTGCACATGTCCATGAC +
Preference number: 5 (lower is better)
Translates to: YTQDTLRAFREHETGSPRWRAED*IAHVHD
Trigger: GTCATGGACATGTGCAATCAAGTCTTCTGCCCTCCA...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATAGTTTTGATGACTTCATaGATGTGTGCCTGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIVLMTS*MCAWQD
Trigger: GTCCTGCCAGGCACACATCAATGAAGTCATCAAAAC...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CAGCGGCCCACAGGGCACACAGATTTGCCCGTGTGCCATTATCCAGAAACAGCTCTTCCCCTTGTACAATaGGTTATATTGAAGACTACT +
Preference number: 5 (lower is better)
Translates to: QRPTGHTDLPVCHYPETALPLVQ*VILKTT
Trigger: AGTAGTCTTCAATATAACCAATTGTACAAGGGGAAG...AGCTGTTTCTGGATAATGGCACACGGGCAAATCTGTGTGCCCTGTGGGCCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGGGAACAGCTTTGTTATaGGCCGGGGACAACTCACAC +
Preference number: 5 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKGTALL*AGDNSH
Trigger: GTGTGAGTTGTCCCCGGCCAATAACAAAGCTGTTCC...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACACTATTCTGCCACTGTTaGGCCAGGGATGGCAAGAAT +
Preference number: 5 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTLFCHC*ARDGKN
Trigger: ATTCTTGCCATCCCTGGCCAAACAGTGGCAGAATAG...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CAGGACCTGGCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACGCAATTTGGCATTCATaGGCTGATTCATGCATGGCA +
Preference number: 5 (lower is better)
Translates to: QDLAYWPLRVTRLVSTEHAIWHS*ADSCMA
Trigger: TGCCATGCATGAATCAGCCAATGAATGCCAAATTGC...GTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGCCAGGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS TCA 90 bp GTCTGTCTCATTCGCTACTTTCTTTCGCATGTACACGTGTCTGGCTaGGTGGCCCTAGGGGCGCCAAACATTTTACTAATAACATCTCCT +
Preference number: 5 (lower is better)
Translates to: VCLIRYFLSHVHVSG*VALGAPNILLITSP
Trigger: AGGAGATGTTATTAGTAAAATGTTTGGCGCCCCTAGGGCCACTCAGCCAGACACGTGTACATGCGAAAGAAAGTAGCGAATGAGACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS TCA 90 bp CACTCTCTAAACGTTAGCAAATACCATGGTAGGACACAAGGCCCCTaGCTCTCCGCTTTCAGCTTACTGAAGATCCTCAAAACCAACAGC +
Preference number: 5 (lower is better)
Translates to: HSLNVSKYHGRTQGP*LSAFSLLKILKTNS
Trigger: GCTGTTGGTTTTGAGGATCTTCAGTAAGCTGAAAGCGGAGAGTCAGGGGCCTTGTGTCCTACCATGGTATTTGCTAACGTTTAGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS TCA 90 bp TACAGTTCCAGGAGTGTGGAGGGACCTTTCTCAGCTGTGAGATTATaGACCCAATGTTCAAGGCTCCAAAGTTTTGCTGTGGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: YSSRSVEGPFSAVRL*TQCSRLQSFAVVWM
Trigger: CATCCACACCACAGCAAAACTTTGGAGCCTTGAACATTGGGTTCATAATCTCACAGCTGAGAAAGGTCCCTCCACACTCCTGGAACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS GCA 90 bp GGAAGGAAAAATCTCTTTACTTGCCGAGAAATGGCTCTAGTAGCTTaGCCTGGTCAGCTCCTCTTGCAAAAGAAGAATCACCCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: GRKNLFTCREMALVA*PGQLLLQKKNHPRS
Trigger: GCTCCTAGGGTGATTCTTCTTTTGCAAGAGGAGCTGACCAGGGCAAGCTACTAGAGCCATTTCTCGGCAAGTAAAGAGATTTTTCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000490348.1
CDS GCA 90 bp CGTTTCCAGAATTGCTCACCATGCATATACCTGTGTTGGCTTATTTaGTCATTTCACCACACAAGTTGGCCTGACTCAATGGTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RFQNCSPCIYLCWLI*SFHHTSWPDSMVPA
Trigger: GGCTGGCACCATTGAGTCAGGCCAACTTGTGTGGTGAAATGAGCAAATAAGCCAACACAGGTATATGCATGGTGAGCAATTCTGGAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp CGAGGTAGTGGCTTTACCCTCCTAACTTATCTAGGTGCCAGTGACTTAACTAGGTGCAGGCCAATCTCCTaGCTCTTTTTGAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: RGSGFTLLTYLGASDLTRCRPIS*LFLKSL
Trigger: CAGACTCTTCAAAAAGAGCAAGGAGATTGGCCTGCA...CCTAGTTAAGTCACTGGCACCTAGATAAGTTAGGAGGGTAAAGCCACTACCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACAGGTCTCCTGACTTATaGAACTGCTTCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANRSPDL*NCFSSC
Trigger: GCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACCT...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATATTTGTGCATTTCAGCTaGTTCTCAGAGTACTTGGCC +
Preference number: 5 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIFVHFS*FSEYLA
Trigger: GGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAA...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp CGCTGTGTGGGCTGTCACAATATTCTTCCCCTCCAGCCATGCATTTTTCATACAAGTCATTCCGGGCCTTaGTGCATTTCAGCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: RCVGCHNILPLQPCIFHTSHSGP*CISACS
Trigger: AGAACAAGCTGAAATGCACAAAGGCCCGGAATGACT...TGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATTTGAGTAAATCGTGCTaGGCCTGCAGCTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNLSKSC*ACSLVM
Trigger: CATCACCAAGCTGCAGGCCAAGCACGATTTACTCAA...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ACTGAGAGGAAGAACCATTACCCGAGTCCTCGTGTTTTTCCATTAGCTGTGGACGCAGATTGCTATATTTaGCCTGGGAGGCTACTGGAT +
Preference number: 5 (lower is better)
Translates to: TERKNHYPSPRVFPLAVDADCYI*PGRLLD
Trigger: ATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGC...GTCCACAGCTAATGGAAAAACACGAGGACTCGGGTAATGGTTCTTCCTCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGGGTAGGAAGCACAGCTaGTTCTCAATTTTATCCAAA +
Preference number: 5 (lower is better)
Translates to: LGSFGYVGNVLCGCSEERGRKHS*FSILSK
Trigger: TTTGGATAAAATTGAGAACAAGCTGTGCTTCCTACC...CCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp CTTCCACTGTGGGGTGTCAAGTCCAGTCCTTCAGACGAGGTAGTGGCTTTACCCTCAGAATCAAACCTATaGCCAAACCATGTAAACAGT +
Preference number: 5 (lower is better)
Translates to: LPLWGVKSSPSDEVVALPSESNL*PNHVNS
Trigger: ACTGTTTACATGGTTTGGCAATAGGTTTGATTCTGA...GGGTAAAGCCACTACCTCGTCTGAAGGACTGGACTTGACACCCCACAGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 90 bp CACTGGACCCGTTTCCAGAATTGCTCACCATGCATATACCTGTGTTaGCTTATTTGCTCATTTCACCACACAAGTTGGCCTGACTCAATG +
Preference number: 5 (lower is better)
Translates to: HWTRFQNCSPCIYLC*LICSFHHTSWPDSM
Trigger: CATTGAGTCAGGCCAACTTGTGTGGTGAAATGAGCAAATAAGCCAACACAGGTATATGCATGGTGAGCAATTCTGGAAACGGGTCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCTCCTCATTCTCTATCTaGAGGGTGGCCAGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: MLMMESRALIRMAGKFHCSSFSI*RVASLD
Trigger: GTCCAGACTGGCCACCCTCAAGATAGAGAATGAGGA...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ACAACTAAATTGTTCCTGCAATTTGGCATTCATTGGCTGATTCATGCATGGCAATCGCCCAGGGTCTGCTaGAGTAAATCGTGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TTKLFLQFGIHWLIHAWQSPRVC*SKSCLA
Trigger: GGCCAAGCACGATTTACTCAAGCAGACCCTGGGCGA...TTGCCATGCATGAATCAGCCAATGAATGCCAAATTGCAGGAACAATTTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCGACTGGAGGTCGTTTTaGGAAGAGGCCTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: MLMMESRALIRMAGKFHCDWRSF*EEALSS
Trigger: GGATGACAAGGCCTCTTCCAAAAACGACCTCCAGTC...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATAGCCAGTGTCAAATCTaGGGCAGGTCACAGCACAGC +
Preference number: 5 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYSQCQI*GRSQHS
Trigger: GCTGTGCTGTGACCTGCCCAAGATTTGACACTGGCT...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCAGGATCTGGGAGTATCTaGAGGGTAGAAATCAGAAGT +
Preference number: 5 (lower is better)
Translates to: MSGETSAICVCTSLNVNSGSGSI*RVEIRS
Trigger: ACTTCTGATTTCTACCCTCAAGATACTCCCAGATCC...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCAGTTGTGGCAGATTGCTATATTTTGCCTGGGAGGCTACTGGATTTAGGATCGGATCTGGGAGTATCTaGAGGGTAGAAATCAGAAGT +
Preference number: 5 (lower is better)
Translates to: GSCGRLLYFAWEATGFRIGSGSI*RVEIRS
Trigger: ACTTCTGATTTCTACCCTCAAGATACTCCCAGATCC...GATCCTAAATCCAGTAGCCTCCCAGGCAAAATATAGCAATCTGCCACAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp ATGAGTGGGGAGACGTCTGCCATCTGTGTGTGTACATCCCTAAATGTGAACTCATTTCCTAGGGTGGTTTaGGTCTGTTTTTCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: MSGETSAICVCTSLNVNSFPRVV*VCFSCH
Trigger: GTGACAGGAAAAACAGACCAAAACCACCCTAGGAAA...TGAGTTCACATTTAGGGATGTACACACACAGATGGCAGACGTCTCCCCACTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATACATGCCATAATTTGCTaGGTGCTGTCATTCCCATTT +
Preference number: 5 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIHAIIC*VLSFPF
Trigger: AAATGGGAATGACAGCACCAAGCAAATTATGGCATG...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS GCA 90 bp GCAAAGGACTGTGTGAATCACACGAGGATTTCTTTCTTTGTGTGGTaGTCTGTGCACTGTCTGGAATCTCTGACAAGGAAACGTAGCTAT +
Preference number: 5 (lower is better)
Translates to: AKDCVNHTRISFFVW*SVHCLESLTRKRSY
Trigger: ATAGCTACGTTTCCTTGTCAGAGATTCCAGACAGTGCACAGAGCACCACACAAAGAAAGAAATCCTCGTGTGATTCACACAGTCCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp GTTCACCAGAGAAACAGCCACAAACACTGGACCCGTTTCCAGAATTaGTCACCATGCATATACCTGTGTTGGCTTATTTGCTCATTTCAC +
Preference number: 5 (lower is better)
Translates to: VHQRNSHKHWTRFQN*SPCIYLCWLICSFH
Trigger: GTGAAATGAGCAAATAAGCCAACACAGGTATATGCATGGTGAGCAATTCTGGAAACGGGTCCAGTGTTTGTGGCTGTTTCTCTGGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 90 bp CTCTTTCACTTGGCTGCAGAGCAGGGAGAAAAATCCTTCTCCTTCTaGAAGGAAAAATCTCTTTACTTGCCGAGAAATGGCTCTAGTAGC +
Preference number: 5 (lower is better)
Translates to: LFHLAAEQGEKSFSF*KEKSLYLPRNGSSS
Trigger: GCTACTAGAGCCATTTCTCGGCAAGTAAAGAGATTTTTCCTTCCAGAAGGAGAAGGATTTTTCTCCCTGCTCTGCAGCCAAGTGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000490348.1
CDS CCA 90 bp TTAAGTCTGTCTCATTCGCTACTTTCTTTCGCATGTACACGTGTCTaGCTGAGTGGCCCTAGGGGCGCCAAACATTTTACTAATAACATC +
Preference number: 5 (lower is better)
Translates to: LSLSHSLLSFACTRV*LSGPRGAKHFTNNI
Trigger: GATGTTATTAGTAAAATGTTTGGCGCCCCTAGGGCCACTCAGCCAGACACGTGTACATGCGAAAGAAAGTAGCGAATGAGACAGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS-3UTR CAA 90 bp TACACACAGGATACTTTGAGAGCCTTCAGGGAACATGAAACTGGCTCTCCCAGAATCTCCTTGCTCTTTTaGAAGAGTCTGATGACATCC +
Preference number: 5 (lower is better)
Translates to: YTQDTLRAFREHETGSPRISLLF*KSLMTS
Trigger: GGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGAT...TCTGGGAGAGCCAGTTTCATGTTCCCTGAAGGCTCTCAAAGTATCCTGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS-3UTR CAA 90 bp AGACTACTAACTAGGTTACTACATTTCCCCCACACTCACTGTACAGTTAGGTATAAGGGTGACGAGGATTaGTTGGATCTGGTGCACCCT +
Preference number: 5 (lower is better)
Translates to: RLLTRLLHFPHTHCTVRYKGDED*LDLVHP
Trigger: AGGGTGCACCAGATCCAACAAATCCTCGTCACCCTT...ATACCTAACTGTACAGTGAGTGTGGGGGAAATGTAGTAACCTAGTTAGTAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp AGAAATCAGAAGTCTTGTGTCCTGGCTGGACAGTATAGCATCCAGCATGCAAACTTTCCTAGGGTGGTTTaGGTCTGTTTTTCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: RNQKSCVLAGQYSIQHANFPRVV*VCFSCH
Trigger: GTGACAGGAAAAACAGACCAAAACCACCCTAGGAAA...GTTTGCATGCTGGATGCTATACTGTCCAGCCAGGACACAAGACTTCTGATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 90 bp CTCCAAAGTTTTGCTGTGGTGTGGATGGTAAGGACAGTCTTTCTCTaGTGTTCTCAGAAGATCCAATCTTTGGGTTCTTGCGTGTTCACT +
Preference number: 5 (lower is better)
Translates to: LQSFAVVWMVRTVFL*CSQKIQSLGSCVFT
Trigger: AGTGAACACGCAAGAACCCAAAGATTGGATCTTCTGAGAACATCAGAGAAAGACTGTCCTTACCATCCACACCACAGCAAAACTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS GCA 90 bp AGAAACAGCCACAAACACTGGACCCGTTTCCAGAATTGCTCACCATaGATATACCTGTGTTGGCTTATTTGCTCATTTCACCACACAAGT +
Preference number: 5 (lower is better)
Translates to: RNSHKHWTRFQNCSP*IYLCWLICSFHHTS
Trigger: ACTTGTGTGGTGAAATGAGCAAATAAGCCAACACAGGTATATGCATGGTGAGCAATTCTGGAAACGGGTCCAGTGTTTGTGGCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp CTCAGCTGTGAGATTATGAACCCAATGTTCAAGGCTCCAAAGTTTTaGTGTGGTGTGGATGGTAAGGACAGTCTTTCTCTGATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: LSCEIMNPMFKAPKF*CGVDGKDSLSLMFS
Trigger: TGAGAACATCAGAGAAAGACTGTCCTTACCATCCACACCACAGCAAAACTTTGGAGCCTTGAACATTGGGTTCATAATCTCACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS-3UTR CAA 90 bp ATTTGCCCGTGTGCCATTATCCAGAAACAGCTCATCTCTGGAAGTGATCAGAAGATCTCCTTGCTCTTTTaGAAGAGTCTGATGACATCC +
Preference number: 5 (lower is better)
Translates to: ICPCAIIQKQLISGSDQKISLLF*KSLMTS
Trigger: GGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGAT...CTTCTGATCACTTCCAGAGATGAGCTGTTTCTGGATAATGGCACACGGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp AGACTGTTCTGGAAGGCCACGACTTCTGGAGACAGTGGGAGTCTGTTTTTGTTTCAGGTTAGTGGTATATaGCTTCATTCGCAGTTACTA +
Preference number: 5 (lower is better)
Translates to: RLFWKATTSGDSGSLFLFQVSGI*LHSQLL
Trigger: TAGTAACTGCGAATGAAGCAATATACCACTAACCTG...AAACAAAAACAGACTCCCACTGTCTCCAGAAGTCGTGGCCTTCCAGAACAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GGCCTGCTGGATTCCATTCATACCGGGTGCTGTCAAGAGCAAAGAAGACAGATATACTCTTTAAATTTCTaGATGGGTTTCTGGAACGAC +
Preference number: 5 (lower is better)
Translates to: GLLDSIHTGCCQEQRRQIYSLNF*MGFWND
Trigger: GTCGTTCCAGAAACCCATCAAGAAATTTAAAGAGTA...TATCTGTCTTCTTTGCTCTTGACAGCACCCGGTATGAATGGAATCCAGCAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS CCA 90 bp CCTGAATCCTTAATGAATGCTTCCATACTGCCGTTAAAGAGTTTATaGCTATACACTGAGAGAGGCCTAGGTCTCCTCATTTTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: PESLMNASILPLKSL*LYTERGLGLLIFCG
Trigger: ACCACAGAAAATGAGGAGACCTAGGCCTCTCTCAGTGTATAGCCATAAACTCTTTAACGGCAGTATGGAAGCATTCATTAAGGATTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383836.8
CDS CCA 90 bp TTCAAATCCATTATTATACTTAATACCATCTCAACCCTGTGCATGTaGCCCCATTTTACAGAGGCAGAGACTGAAGCCTCCTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: FKSIIILNTISTLCM*PHFTEAETEASCEG
Trigger: TCCTTCACAGGAGGCTTCAGTCTCTGCCTCTGTAAAATGGGGCCACATGCACAGGGTTGAGATGGTATTAAGTATAATAATGGATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS-3UTR CAA 90 bp ATGTTAATGATGGAATCCAGGGCTCTTATTAGGATGGCAGGAAAATTCCACTGCTTTGTGCATTTCAGCTaGTTCTCAGAGTACTTGGCC +
Preference number: 5 (lower is better)
Translates to: MLMMESRALIRMAGKFHCFVHFS*FSEYLA
Trigger: GGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAA...GCAGTGGAATTTTCCTGCCATCCTAATAAGAGCCCTGGATTCCATCATTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS-3UTR CAA 90 bp GCTGTTTTATTTCACAGGATAGCTCCACGTCAAACCAGCAGGCACCATCAGAATGGTAGGAAGCACAGCTaGTTCTCAATTTTATCCAAA +
Preference number: 5 (lower is better)
Translates to: AVLFHRIAPRQTSRHHQNGRKHS*FSILSK
Trigger: TTTGGATAAAATTGAGAACAAGCTGTGCTTCCTACC...ATTCTGATGGTGCCTGCTGGTTTGACGTGGAGCTATCCTGTGAAATAAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 90 bp GGATTTCTTTCTTTGTGTGGTGCTCTGTGCACTGTCTGGAATCTCTaGCAAGGAAACGTAGCTATCCCAACTTTGCACAATATCAAATCT +
Preference number: 5 (lower is better)
Translates to: GFLSLCGALCTVWNL*QGNVAIPTLHNIKS
Trigger: AGATTTGATATTGTGCAAAGTTGGGATAGCTACGTTTCCTTGTCAGAGATTCCAGACAGTGCACAGAGCACCACACAAAGAAAGAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 90 bp GAGCAAATGCTGCTAGCTCCAGTACATGCATGGGCAAAAACCAGGTaGATCCAAATATCATGCCACCCAAACAATGGAAACAAAATAACA +
Preference number: 5 (lower is better)
Translates to: EQMLLAPVHAWAKTR*IQISCHPNNGNKIT
Trigger: TGTTATTTTGTTTCCATTGTTTGGGTGGCATGATATTTGGATTCACCTGGTTTTTGCCCATGCATGTACTGGAGCTAGCAGCATTTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 90 bp CTCTGCATGGTACATGTGGTAGGTTTTCATGACAGGGGAAATTTCTaGGCCAGAAGAAATTCTAGACATCATCTAATCCAACAACCTTCT +
Preference number: 5 (lower is better)
Translates to: LCMVHVVGFHDRGNF*ARRNSRHHLIQQPS
Trigger: AGAAGGTTGTTGGATTAGATGATGTCTAGAATTTCTTCTGGCTCAGAAATTTCCCCTGTCATGAAAACCTACCACATGTACCATGCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480750.3
CDS TCA 90 bp GATCATTTCCTTATCACATTGCATGACAACCTCACAACAACCCTGTaGGGCTGGGAAAGAATATTCAATTCACTTTACATACAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: DHFLITLHDNLTTTL*GWERIFNSLYIQGQ
Trigger: CTGGCCTTGTATGTAAAGTGAATTGAATATTCTTTCCCAGCCTCACAGGGTTGTTGTGAGGTTGTCATGCAATGTGATAAGGAAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 90 bp GGCTTGTTTTTGAACATTCCCAGATCATTTCCTTATCACATTGCATaGCAACCTCACAACAACCCTGTGAGGCTGGGAAAGAATATTCAA +
Preference number: 5 (lower is better)
Translates to: GLFLNIPRSFPYHIA*QPHNNPVRLGKNIQ
Trigger: TTGAATATTCTTTCCCAGCCTCACAGGGTTGTTGTGAGGTTGTCATGCAATGTGATAAGGAAATGATCTGGGAATGTTCAAAAACAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 90 bp GTTTGGCTTGTTTTTGAACATTCCCAGATCATTTCCTTATCACATTaGATGACAACCTCACAACAACCCTGTGAGGCTGGGAAAGAATAT +
Preference number: 5 (lower is better)
Translates to: VWLVFEHSQIISLSH*MTTSQQPCEAGKEY
Trigger: ATATTCTTTCCCAGCCTCACAGGGTTGTTGTGAGGTTGTCATGCAATGTGATAAGGAAATGATCTGGGAATGTTCAAAAACAAGCCAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp TGCTGCTGCGGCGCATGGCGGCATCGGGGTCGCGGATaGCGATGGTGTGAAGGGGACTGGCGGGCTCCGAGC +
Preference number: 6 (lower is better)
Translates to: CCCGAWRHRGRG*RWCEGDWRAPS
Trigger: GCTCGGAGCCCGCCAGTCCCCTTCACACCATCGTCATCCGCGACCCCGATGCCGCCATGCGCCGCAGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 72 bp GCTGGGCGCCAGCCAGGCGGGCGGACAGGGCTGGCTTaGAGGTGGTCATCATCTCGGTGGAGGAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: AGRQPGGRTGLA*RWSSSRWRSCC
Trigger: GCAGCAGCTCCTCCACCGAGATGATGACCACCTTCAAGCCAGCCCTGTCCGCCCGCCTGGCTGGCGCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp GCGGAGCTGGGCGCCAGCCAGGCGGGCGGACAGGGCTaGCTTGAAGGTGGTCATCATCTCGGTGGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: AELGASQAGGQG*LEGGHHLGGGA
Trigger: AGCTCCTCCACCGAGATGATGACCACCTTCAAGCCAGCCCTGTCCGCCCGCCTGGCTGGCGCCCAGCTCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp CGGGCCACGGCGGCGCGGCCCATCCTGCAGGTCACATaGTGCCCGACTTGTCCGCTGAGCTGTTGGGGAACA +
Preference number: 6 (lower is better)
Translates to: RATAARPILQVT*CPTCPLSCWGT
Trigger: TGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGGCCGCGCCGCCGTGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CAA 90 bp GGCCACGGCGGCGCGGCCCATCCTGCAGGTCACATGGTGCCCGACTaGTCCGCTGAGCTGTTGGGGAACATCTTCTCGGTGGGCGTCACG +
Preference number: 6 (lower is better)
Translates to: GHGGAAHPAGHMVPD*SAELLGNIFSVGVT
Trigger: CGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGGCCGCGCCGCCGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp GGGGCGGGCTGTGTGTGTCGCCCCCGCTTCGGCGTCTaGGGATGGCTGCTCCATCAGATCGTAACCGCACTC +
Preference number: 6 (lower is better)
Translates to: GAGCVCRPRFGV*GWLLHQIVTAL
Trigger: GAGTGCGGTTACGATCTGATGGAGCAGCCATCCCCAGACGCCGAAGCGGGGGCGACACACACAGCCCGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp CAGCTTCCAGCGCATGCTCCTTTCCCCAAGACCTTGTaGGGGAACCCGCCGCCAGCGCGGAGCCACCGTGAC +
Preference number: 6 (lower is better)
Translates to: QLPAHAPFPKTL*GNPPPARSHRD
Trigger: GTCACGGTGGCTCCGCGCTGGCGGCGGGTTCCCCCACAAGGTCTTGGGGAAAGGAGCATGCGCTGGAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS CAA 90 bp GCCCATCCTGCAGGTCACATGGTGCCCGACTTGTCCGCTGAGCTGTaGGGGAACATCTTCTCGGTGGGCGTCACGGCCGGGCTGCCCACG +
Preference number: 6 (lower is better)
Translates to: AHPAGHMVPDLSAEL*GNIFSVGVTAGLPT
Trigger: CGTGGGCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 72 bp GCCACGGCGGCGCGGCCCATCCTGCAGGTCACATGGTaGCCGACTTGTCCGCTGAGCTGTTGGGGAACATCT +
Preference number: 6 (lower is better)
Translates to: ATAARPILQVTW*PTCPLSCWGTS
Trigger: AGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGGCCGCGCCGCCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp GCGCGCAATCTGAGCCTGGCCCAAAGCCTTGGTACATaGGGACCTCAGGCTGGGCCTCGCAGCATGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ARNLSLAQSLGT*GPQAGPRSMAG
Trigger: CCCAGCCATGCTGCGAGGCCCAGCCTGAGGTCCCCATGTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp ACACAGCTTCCAGCGCATGCTCCTTTCCCCAAGACCTaGTGGGGGAACCCGCCGCCAGCGCGGAGCCACCGT +
Preference number: 6 (lower is better)
Translates to: TQLPAHAPFPKT*WGNPPPARSHR
Trigger: ACGGTGGCTCCGCGCTGGCGGCGGGTTCCCCCACAAGGTCTTGGGGAAAGGAGCATGCGCTGGAAGCTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS GCA 72 bp TCGGCCTCCAGGGACTTGTGGTCCCCTAGGCTGCTGTaGCTGGTGGAACCGCAGGTCGACCTCATCGAGTGC +
Preference number: 6 (lower is better)
Translates to: SASRDLWSPRLL*LVEPQVDLIEC
Trigger: GCACTCGATGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp CCAGGGACTTGTGGTCCCCTAGGCTGCTGTGCCTGGTaGAACCGCAGGTCGACCTCATCGAGTGCCCTTCGG +
Preference number: 6 (lower is better)
Translates to: PGTCGPLGCCAW*NRRSTSSSALR
Trigger: CCGAAGGGCACTCGATGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp CAGGTCACATGGTGCCCGACTTGTCCGCTGAGCTGTTaGGGAACATCTTCTCGGTGGGCGTCACGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: QVTWCPTCPLSC*GTSSRWASRPG
Trigger: GCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp CCCAGCTGCGCGCAATCTGAGCCTGGCCCAAAGCCTTaGTACATGGGGACCTCAGGCTGGGCCTCGCAGCAT +
Preference number: 6 (lower is better)
Translates to: PSCAQSEPGPKP*YMGTSGWASQH
Trigger: ATGCTGCGAGGCCCAGCCTGAGGTCCCCATGTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGCAGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp GCAGGTCACATGGTGCCCGACTTGTCCGCTGAGCTGTaGGGGAACATCTTCTCGGTGGGCGTCACGGCCGGG +
Preference number: 6 (lower is better)
Translates to: AGHMVPDLSAEL*GNIFSVGVTAG
Trigger: CCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 72 bp TGGCAGGATCCCCTGGATACTGAGAGCCCTGGTGGGTaGTGGCACTCCCTGGGGGCTGTCAGCTGCATCAGG +
Preference number: 6 (lower is better)
Translates to: WQDPLDTESPGG*WHSLGAVSCIR
Trigger: CCTGATGCAGCTGACAGCCCCCAGGGAGTGCCATCACCCACCAGGGCTCTCAGTATCCAGGGGATCCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520860.1
CDS CCA 72 bp CCTCCAGGGACTTGTGGTCCCCTAGGCTGCTGTGCCTaGTGGAACCGCAGGTCGACCTCATCGAGTGCCCTT +
Preference number: 6 (lower is better)
Translates to: PPGTCGPLGCCA*WNRRSTSSSAL
Trigger: AAGGGCACTCGATGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CCA 72 bp CCTGGCCCAAAGCCTTGGTACATGGGGACCTCAGGCTaGGCCTCGCAGCATGGCTGGGCAGTTTGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: PGPKPWYMGTSG*ASQHGWAVCSA
Trigger: TGCTGAGCAAACTGCCCAGCCATGCTGCGAGGCCCAGCCTGAGGTCCCCATGTACCAAGGCTTTGGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp GGCGCGGCCCATCCTGCAGGTCACATGGTGCCCGACTaGTCCGCTGAGCTGTTGGGGAACATCTTCTCGGTG +
Preference number: 6 (lower is better)
Translates to: GAAHPAGHMVPD*SAELLGNIFSV
Trigger: CACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGGGCCGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CAA 90 bp ATGGTCTTCTCGATGTCTTCTGCCAGGGCCTCGGCCTCCAGGGACTaGTGGTCCCCTAGGCTGCTGTGCCTGGTGGAACCGCAGGTCGAC +
Preference number: 6 (lower is better)
Translates to: MVFSMSSARASASRD*WSPRLLCLVEPQVD
Trigger: GTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGGCCGAGGCCCTGGCAGAAGACATCGAGAAGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CAA 90 bp AGGCGCGGCGCCTCTTTGGTCGTGCAGCCAGCCCCTGGCTTGCTTTaGAAGGCTCTGCTAAGTCGATGGTCAGGTTGCCAAAGGGCCGGT +
Preference number: 6 (lower is better)
Translates to: RRGASLVVQPAPGLL*KALLSRWSGCQRAG
Trigger: ACCGGCCCTTTGGCAACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGCGCCGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CAA 90 bp CCCTCCCCAGCACCACCGCTCACAGTGTTCTTTCTCCCAGTCTGCTaGTCCCTGTGGCGTGTCCTGCACAGCGGGTACTCGGGAGTCAGT +
Preference number: 6 (lower is better)
Translates to: PSPAPPLTVFFLPVC*SLWRVLHSGYSGVS
Trigger: ACTGACTCCCGAGTACCCGCTGTGCAGGACACGCCACAGGGACAAGCAGACTGGGAGAAAGAACACTGTGAGCGGTGGTGCTGGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS TCA 72 bp CCCTTCGTGGCGAGAGGTCTCCAGGTTGTATTCAGCTaGGAGATAGGTCCGGAAGGTGCGGGCCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: PFVARGLQVVFS*EIGPEGAGQAG
Trigger: GCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTCGCCACGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000485983.6
ENST00000618999.4
CDS TCA 72 bp AGTGCCCTTCGGAGAGCGCCTTCTTGTCAGGGTAGTTaGTGCTGCCAGCGCTCCCGAACGTCGCCATCCTCC +
Preference number: 6 (lower is better)
Translates to: SALRRAPSCQGS*CCQRSRTSPSS
Trigger: GGAGGATGGCGACGTTCGGGAGCGCTGGCAGCATCAACTACCCTGACAAGAAGGCGCTCTCCGAAGGGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS TCA 72 bp GCCTATGCACATGCGTGTGCCCAGCTGCGCGCAATCTaGGCCTGGCCCAAAGCCTTGGTACATGGGGACCTC +
Preference number: 6 (lower is better)
Translates to: AYAHACAQLRAI*AWPKALVHGDL
Trigger: GAGGTCCCCATGTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGCAGCTGGGCACACGCATGTGCATAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp TTCTTCACAGAGCTGCGGCGCTGGGGCCGGTCCTCGTaGCGGAGCAGGTTCATGCTGAGGTCTCCTGACTTA +
Preference number: 6 (lower is better)
Translates to: FFTELRRWGRSS*RSRFMLRSPDL
Trigger: TAAGTCAGGAGACCTCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000470951.5
ENST00000480750.3
ENST00000485983.6
ENST00000618999.4
CDS GCA 72 bp CTGCAAGCTCCACCTGCCGGATTCACGCCATTCTCCTaGCTCAGCCTCCCGATTAGCTGGGACTACAGGCGC +
Preference number: 6 (lower is better)
Translates to: LQAPPAGFTPFS*LSLPISWDYRR
Trigger: GCGCCTGTAGTCCCAGCTAATCGGGAGGCTGAGGCAGGAGAATGGCGTGAATCCGGCAGGTGGAGCTTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490348.1
CDS CCA 72 bp GAGGCGCGGCGCCTCTTTGGTCGTGCAGCCAGCCCCTaGCTTGCTTTTGAAGGCTCTGCTAAGTCGATGGTC +
Preference number: 6 (lower is better)
Translates to: EARRLFGRAASP*LAFEGSAKSMV
Trigger: GACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGCGCCGCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CAA 90 bp CACGAGAGGCGCGGCGCCTCTTTGGTCGTGCAGCCAGCCCCTGGCTaGCTTTTGAAGGCTCTGCTAAGTCGATGGTCAGGTTGCCAAAGG +
Preference number: 6 (lower is better)
Translates to: HERRGASLVVQPAPG*LLKALLSRWSGCQR
Trigger: CCTTTGGCAACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGCGCCGCGCCTCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS TCA 72 bp CCATCCTGCAGGTCACATGGTGCCCGACTTGTCCGCTaGGCTGTTGGGGAACATCTTCTCGGTGGGCGTCAC +
Preference number: 6 (lower is better)
Translates to: PSCRSHGARLVR*AVGEHLLGGRH
Trigger: GTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATGTGACCTGCAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 72 bp CCAGCACCACCGCTCACAGTGTTCTTTCTCCCAGTCTaGTTGTCCCTGTGGCGTGTCCTGCACAGCGGGTAC +
Preference number: 6 (lower is better)
Translates to: PAPPLTVFFLPV*LSLWRVLHSGY
Trigger: GTACCCGCTGTGCAGGACACGCCACAGGGACAAGCAGACTGGGAGAAAGAACACTGTGAGCGGTGGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 72 bp AGTCTGTGCACGCCTATGCACATGCGTGTGCCCAGCTaGGCGCAATCTGAGCCTGGCCCAAAGCCTTGGTAC +
Preference number: 6 (lower is better)
Translates to: SLCTPMHMRVPS*AQSEPGPKPWY
Trigger: GTACCAAGGCTTTGGGCCAGGCTCAGATTGCGCGCAGCTGGGCACACGCATGTGCATAGGCGTGCACAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp TGGGCCTCGCAGCATGGCTGGGCAGTTTGCTCAGCATaGTGTAGCAGGTGGGAAGAGAGGTCAACAGCCACC +
Preference number: 6 (lower is better)
Translates to: WASQHGWAVCSA*CSRWEERSTAT
Trigger: GGTGGCTGTTGACCTCTCTTCCCACCTGCTACACCATGCTGAGCAAACTGCCCAGCCATGCTGCGAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp TACATGGGGACCTCAGGCTGGGCCTCGCAGCATGGCTaGGCAGTTTGCTCAGCATGGTGTAGCAGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: YMGTSGWASQHG*AVCSAWCSRWE
Trigger: TTCCCACCTGCTACACCATGCTGAGCAAACTGCCCAGCCATGCTGCGAGGCCCAGCCTGAGGTCCCCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp GCCAGCCAGCCCGCCCAGTGTGCCCATTTCATTTTGTaGGGAACAAGGGGCTGCAGTAGGCTCCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: ASQPAQCAHFIL*GTRGCSRLLLS
Trigger: GGAGAGAAGGAGCCTACTGCAGCCCCTTGTTCCCCACAAAATGAAATGGGCACACTGGGCGGGCTGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491467.1
CDS CCA 72 bp GCAACACAGGCTGGATGGTTCTATACCTGGCCTTCTTaGGCCAATGCCAGCCAGCCCGCCCAGTGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: ATQAGWFYTWPS*ANASQPAQCAH
Trigger: ATGGGCACACTGGGCGGGCTGGCTGGCATTGGCCCAAGAAGGCCAGGTATAGAACCATCCAGCCTGTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491467.1
CDS CCA 72 bp TGGATACTGAGAGCCCTGGTGGGTGATGGCACTCCCTaGGGGCTGTCAGCTGCATCAGGATGTAGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: WILRALVGDGTP*GLSAASGCRPE
Trigger: CTCTGGCCTACATCCTGATGCAGCTGACAGCCCCCAGGGAGTGCCATCACCCACCAGGGCTCTCAGTATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520860.1
CDS CAA 72 bp CGCGGCGCCTCTTTGGTCGTGCAGCCAGCCCCTGGCTaGCTTTTGAAGGCTCTGCTAAGTCGATGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: RGASLVVQPAPG*LLKALLSRWSG
Trigger: ACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGCGCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CAA 72 bp TCACACACACACATCCACGAGAGGCGCGGCGCCTCTTaGGTCGTGCAGCCAGCCCCTGGCTTGCTTTTGAAG +
Preference number: 6 (lower is better)
Translates to: SHTHIHERRGAS*VVQPAPGLLLK
Trigger: CTTCAAAAGCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGCGCCGCGCCTCTCGTGGATGTGTGTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CAA 90 bp AGCCCCTGGCTTGCTTTTGAAGGCTCTGCTAAGTCGATGGTCAGGTaGCCAAAGGGCCGGTCATCTCGCATCCTCCCTCCCTTCGGTGCC +
Preference number: 6 (lower is better)
Translates to: SPWLAFEGSAKSMVR*PKGRSSRILPPFGA
Trigger: GGCACCGAAGGGAGGGAGGATGCGAGATGACCGGCCCTTTGGCAACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CAA 90 bp CTGGATCACTCACACACACACATCCACGAGAGGCGCGGCGCCTCTTaGGTCGTGCAGCCAGCCCCTGGCTTGCTTTTGAAGGCTCTGCTA +
Preference number: 6 (lower is better)
Translates to: LDHSHTHIHERRGAS*VVQPAPGLLLKALL
Trigger: TAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGCGCCGCGCCTCTCGTGGATGTGTGTGTGTGAGTGATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS TCA 72 bp TTGAGGGTGGCATGGTCTCGGCTCTCCCGCCGGGTCTaGTGCAGAACCAGATACCAACAGTTCACAGGCGAG +
Preference number: 6 (lower is better)
Translates to: LRVAWSRLSRRV*CRTRYQQFTGE
Trigger: CTCGCCTGTGAACTGTTGGTATCTGGTTCTGCATCAGACCCGGCGGGAGAGCCGAGACCATGCCACCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000470951.5
ENST00000618999.4
CDS GCA 72 bp TCTGCCTCTCGAGTTCCCGCAACTCGTGCAGAGCCGTaGTCATGGTCTTCTCGATGTCTTCTGCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SASRVPATRAEP*SWSSRCLLPGP
Trigger: AGGCCCTGGCAGAAGACATCGAGAAGACCATGAGCACGGCTCTGCACGAGTTGCGGGAACTCGAGAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS CAA 90 bp CACACTCACGCATGCACAGGCACACTCACCGGGACACGCACACAGTaGTGCTGTGCACACAGGCATACACACACACACCCTCACACGCAC +
Preference number: 6 (lower is better)
Translates to: HTHACTGTLTGTRTQ*CCAHRHTHTHPHTH
Trigger: GTGCGTGTGAGGGTGTGTGTGTGTATGCCTGTGTGCACAGCACAACTGTGTGCGTGTCCCGGTGAGTGTGCCTGTGCATGCGTGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS TCA 72 bp CTGCCGCCCCGTGTGCTGGAAGGGCCTTGCCTGGTGTaGATCATCCTGATGTTTCCAAATTGCCAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: LPPRVLEGPCLV*IILMFPNCQSP
Trigger: TGGGCTCTGGCAATTTGGAAACATCAGGATGATTCACACCAGGCAAGGCCCTTCCAGCACACGGGGCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp GATGGAAGTTTTCCTGCTGCAACGCTTAAGCTCCGGTaGACACAAGGCTGGACTGCTCGCCCTGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: DGSFPAATLKLR*TQGWTARPAGL
Trigger: CAGCCCTGCAGGGCGAGCAGTCCAGCCTTGTGTTCACCGGAGCTTAAGCGTTGCAGCAGGAAAACTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490348.1
CDS GCA 72 bp TCTTTCTCCCAGTCTGCTTGTCCCTGTGGCGTGTCCTaGACAGCGGGTACTCGGGAGTCAGTGTTCCGTTCT +
Preference number: 6 (lower is better)
Translates to: SFSQSACPCGVS*TAGTRESVFRS
Trigger: AGAACGGAACACTGACTCCCGAGTACCCGCTGTGCAGGACACGCCACAGGGACAAGCAGACTGGGAGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 72 bp AGTCGCGACTCTGATTGCTGCTCCAGACATTTGAACTaGTCCACCAGCTGCGTGCGGATCTCTGCGGGCACA +
Preference number: 6 (lower is better)
Translates to: SRDSDCCSRHLN*STSCVRISAGT
Trigger: TGTGCCCGCAGAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS CCA 72 bp GCCCCTGGCTTGCTTTTGAAGGCTCTGCTAAGTCGATaGTCAGGTTGCCAAAGGGCCGGTCATCTCGCATCC +
Preference number: 6 (lower is better)
Translates to: APGLLLKALLSR*SGCQRAGHLAS
Trigger: GGATGCGAGATGACCGGCCCTTTGGCAACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CCA 72 bp CTCACAGTGTTCTTTCTCCCAGTCTGCTTGTCCCTGTaGCGTGTCCTGCACAGCGGGTACTCGGGAGTCAGT +
Preference number: 6 (lower is better)
Translates to: LTVFFLPVCLSL*RVLHSGYSGVS
Trigger: ACTGACTCCCGAGTACCCGCTGTGCAGGACACGCCACAGGGACAAGCAGACTGGGAGAAAGAACACTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CCA 72 bp ATGCTAGAACAAGCAAAGCAGCAACTGTGCCTCACCTaGGCACACCCACACCGGCCCTTGGGGACATTGGTG +
Preference number: 6 (lower is better)
Translates to: MLEQAKQQLCLT*AHPHRPLGTLV
Trigger: CACCAATGTCCCCAAGGGCCGGTGTGGGTGTGCCCAGGTGAGGCACAGTTGCTGCTTTGCTTGTTCTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp AATGCCAGCCAGCCCGCCCAGTGTGCCCATTTCATTTaGTGGGGAACAAGGGGCTGCAGTAGGCTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: NASQPAQCAHFI*WGTRGCSRLLL
Trigger: GAGAAGGAGCCTACTGCAGCCCCTTGTTCCCCACAAAATGAAATGGGCACACTGGGCGGGCTGGCTGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491467.1
CDS CAA 72 bp AGCTGCAGTCGCGACTCTGATTGCTGCTCCAGACATTaGAACTGCTCCACCAGCTGCGTGCGGATCTCTGCG +
Preference number: 6 (lower is better)
Translates to: SCSRDSDCCSRH*NCSTSCVRISA
Trigger: CGCAGAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618999.4
CDS CAA 90 bp CCAGCAAAGGACCTGGTGTCCAGGAGGGTACTTGGGAAGTTGCCATaGGATATACAACTGCCCAAGCCAACTGCACTGGGGCCACCAGAG +
Preference number: 6 (lower is better)
Translates to: PAKDLVSRRVLGKLP*DIQLPKPTALGPPE
Trigger: CTCTGGTGGCCCCAGTGCAGTTGGCTTGGGCAGTTGTATATCCAATGGCAACTTCCCAAGTACCCTCCTGGACACCAGGTCCTTTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS TCA 72 bp CAAGCCCTCCGTCTCCCCATCCTGAGCCCAGGAAACTaGAAACCCCAGAGGTTGCCAAGACTTTGCCCAACT +
Preference number: 6 (lower is better)
Translates to: QALRLPILSPGN*KPQRLPRLCPT
Trigger: AGTTGGGCAAAGTCTTGGCAACCTCTGGGGTTTTCAGTTTCCTGGGCTCAGGATGGGGAGACGGAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp CAGAGGCAGAGACTGAAGCCTCCTGTGAAGGAGAACTaGCAGAGCTGGAGCCCAAACCCAGGACTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: QRQRLKPPVKEN*QSWSPNPGLFG
Trigger: GCCAAAGAGTCCTGGGTTTGGGCTCCAGCTCTGTCAGTTCTCCTTCACAGGAGGCTTCAGTCTCTGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp GAAGTTGCCATTGGATATACAACTGCCCAAGCCAACTaGACTGGGGCCACCAGAGGCCCATGTCCCACTCGT +
Preference number: 6 (lower is better)
Translates to: EVAIGYTTAQAN*TGATRGPCPTR
Trigger: ACGAGTGGGACATGGGCCTCTGGTGGCCCCAGTGCAGTTGGCTTGGGCAGTTGTATATCCAATGGCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 72 bp TGGGCCCAGAAAGTGAGGCAAAAAGTAGCGCTCTACTaGCGTGTGATGGAAAAGTGCAGGCCTCTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: WAQKVRQKVALY*RVMEKCRPLGH
Trigger: GTGGCCCAGAGGCCTGCACTTTTCCATCACACGGCAGTAGAGCGCTACTTTTTGCCTCACTTTCTGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp GGCTGGATGGTTCTATACCTGGCCTTCTTGGGCCAATaGCAGCCAGCCCGCCCAGTGTGCCCATTTCATTTT +
Preference number: 6 (lower is better)
Translates to: GWMVLYLAFLGQ*QPARPVCPFHF
Trigger: AAAATGAAATGGGCACACTGGGCGGGCTGGCTGGCATTGGCCCAAGAAGGCCAGGTATAGAACCATCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491467.1
CDS CCA 72 bp AAAGCAGGAAAGAGGAAGGTCTGGCCTTGGGCCATTTaGGAGCTCCCTCTCCTTGCGATGCTGACAATGGGG +
Preference number: 6 (lower is better)
Translates to: KAGKRKVWPWAI*ELPLLAMLTMG
Trigger: CCCCATTGTCAGCATCGCAAGGAGAGGGAGCTCCCAAATGGCCCAAGGCCAGACCTTCCTCTTTCCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CCA 72 bp GAACTGACAGAGCTGGAGCCCAAACCCAGGACTCTTTaGCTCCAAGTTCAGGGCTTTTCCTACCAGGCCACC +
Preference number: 6 (lower is better)
Translates to: ELTELEPKPRTL*LQVQGFSYQAT
Trigger: GGTGGCCTGGTAGGAAAAGCCCTGAACTTGGAGCCAAAGAGTCCTGGGTTTGGGCTCCAGCTCTGTCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp CTTGCTTTTGAAGGCTCTGCTAAGTCGATGGTCAGGTaGCCAAAGGGCCGGTCATCTCGCATCCTCCCTCCC +
Preference number: 6 (lower is better)
Translates to: LAFEGSAKSMVR*PKGRSSRILPP
Trigger: GGGAGGGAGGATGCGAGATGACCGGCCCTTTGGCAACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CAA 72 bp GCCTCTTTGGTCGTGCAGCCAGCCCCTGGCTTGCTTTaGAAGGCTCTGCTAAGTCGATGGTCAGGTTGCCAA +
Preference number: 6 (lower is better)
Translates to: ASLVVQPAPGLL*KALLSRWSGCQ
Trigger: TTGGCAACCTGACCATCGACTTAGCAGAGCCTTCAAAAGCAAGCCAGGGGCTGGCTGCACGACCAAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383836.8
ENST00000490348.1
CDS CAA 72 bp CCCTGCACATCTGCCGCCCCGTGTGCTGGAAGGGCCTaGCCTGGTGTGAATCATCCTGATGTTTCCAAATTG +
Preference number: 6 (lower is better)
Translates to: PCTSAAPCAGRA*PGVNHPDVSKL
Trigger: CAATTTGGAAACATCAGGATGATTCACACCAGGCAAGGCCCTTCCAGCACACGGGGCGGCAGATGTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp TGGTGGCAATGCTGTAGGGCAATGCCAGTCGGGCCCTaGGAGGCTATTCATGGGCTGTGTACTGCGTTGCAT +
Preference number: 6 (lower is better)
Translates to: WWQCCRAMPVGP*EAIHGLCTALH
Trigger: ATGCAACGCAGTACACAGCCCATGAATAGCCTCCAAGGGCCCGACTGGCATTGCCCTACAGCATTGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 90 bp CATCCCAAATGGTGGCAATGCTGTAGGGCAATGCCAGTCGGGCCCTaGGAGGCTATTCATGGGCTGTGTACTGCGTTGCATCTGCCTGAA +
Preference number: 6 (lower is better)
Translates to: HPKWWQCCRAMPVGP*EAIHGLCTALHLPE
Trigger: TTCAGGCAGATGCAACGCAGTACACAGCCCATGAATAGCCTCCAAGGGCCCGACTGGCATTGCCCTACAGCATTGCCACCATTTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp GTCCTCGTGCCGGAGCAGGTTCATGCTGAGGTCTCCTaGCTTATTGAACTGCTTCTCCTCCTGCTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: VLVPEQVHAEVS*LIELLLLLLLS
Trigger: GCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACCTCAGCATGAACCTGCTCCGGCACGAGGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000470951.5
ENST00000480750.3
ENST00000485983.6
ENST00000618999.4
CDS GCA 72 bp TTGACCGTGTTCTGCCTCTCGAGTTCCCGCAACTCGTaGAGAGCCGTGCTCATGGTCTTCTCGATGTCTTCT +
Preference number: 6 (lower is better)
Translates to: LTVFCLSSSRNS*RAVLMVFSMSS
Trigger: AGAAGACATCGAGAAGACCATGAGCACGGCTCTGCACGAGTTGCGGGAACTCGAGAGGCAGAACACGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360413.7
ENST00000383836.8
CDS GCA 72 bp GATTGCTGCTCCAGACATTTGAACTGCTCCACCAGCTaGGTGCGGATCTTTCAGTCCCACGTAGAGGACAGG +
Preference number: 6 (lower is better)
Translates to: DCCSRHLNCSTS*VRIFQSHVEDR
Trigger: CCTGTCCTCTACGTGGGACTGAAAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433332.7
CDS GCA 72 bp AGTCGCGACTCTGATTGCTGCTCCAGACATTTGAACTaGTCCACCAGCTGCGTGCGGATCTTTCAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: SRDSDCCSRHLN*STSCVRIFQSH
Trigger: GTGGGACTGAAAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433332.7
CDS GCA 72 bp TTTCTAAAAGGTTCTTCGAAAGTGACCCTGCACATCTaGCGCCCCGTGTGCTGGAAGGGCCTTGCCTGGTGT +
Preference number: 6 (lower is better)
Translates to: FLKGSSKVTLHI*RPVCWKGLAWC
Trigger: ACACCAGGCAAGGCCCTTCCAGCACACGGGGCGGCAGATGTGCAGGGTCACTTTCGAAGAACCTTTTAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp GTCAACATCCCAAATGGTGGCAATGCTGTAGGGCAATaGCAGTCGGGCCCTTGGAGGCTATTCATGGGCTGT +
Preference number: 6 (lower is better)
Translates to: VNIPNGGNAVGQ*QSGPWRLFMGC
Trigger: ACAGCCCATGAATAGCCTCCAAGGGCCCGACTGGCATTGCCCTACAGCATTGCCACCATTTGGGATGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp ACCACGCGGGGAAGGGTGACGAGGATTTGTTGGATCTaGTGCACCCTCTCGGCTGGGTTCTCCAGTTTAATA +
Preference number: 6 (lower is better)
Translates to: TTRGRVTRICWI*CTLSAGFSSLI
Trigger: TATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000475560.5
CDS CCA 72 bp ACCTGGTGTCCAGGAGGGTACTTGGGAAGTTGCCATTaGATATACAACTGCCCAAGCCAACTGCACTGGGGC +
Preference number: 6 (lower is better)
Translates to: TWCPGGYLGSCH*IYNCPSQLHWG
Trigger: GCCCCAGTGCAGTTGGCTTGGGCAGTTGTATATCCAATGGCAACTTCCCAAGTACCCTCCTGGACACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CCA 72 bp CAGGAAAGCTTCCTTGATGTTCTCCCCACTCAGAGCTaGTCAGGTGATCCTCCTCCAGGGGTCCACATTTCC +
Preference number: 6 (lower is better)
Translates to: QESFLDVLPTQS*SGDPPPGVHIS
Trigger: GGAAATGTGGACCCCTGGAGGAGGATCACCTGACCAGCTCTGAGTGGGGAGAACATCAAGGAAGCTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CAA 72 bp AGCTGCAGTCGCGACTCTGATTGCTGCTCCAGACATTaGAACTGCTCCACCAGCTGCGTGCGGATCTTTCAG +
Preference number: 6 (lower is better)
Translates to: SCSRDSDCCSRH*NCSTSCVRIFQ
Trigger: CTGAAAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433332.7
CDS CAA 72 bp GACCTGGTGTCCAGGAGGGTACTTGGGAAGTTGCCATaGGATATACAACTGCCCAAGCCAACTGCACTGGGG +
Preference number: 6 (lower is better)
Translates to: DLVSRRVLGKLP*DIQLPKPTALG
Trigger: CCCCAGTGCAGTTGGCTTGGGCAGTTGTATATCCAATGGCAACTTCCCAAGTACCCTCCTGGACACCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CAA 72 bp AAAAGCAGGAAAGAGGAAGGTCTGGCCTTGGGCCATTaGGGAGCTCCCTCTCCTTGCGATGCTGACAATGGG +
Preference number: 6 (lower is better)
Translates to: KSRKEEGLALGH*GAPSPCDADNG
Trigger: CCCATTGTCAGCATCGCAAGGAGAGGGAGCTCCCAAATGGCCCAAGGCCAGACCTTCCTCTTTCCTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CAA 72 bp GCAGGGTGTCTAAGTGGGAGGTCTGATAAACTCAGCTaGGATTTCCCAGGCCCTAGGTCAAGGAGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: AGCLSGRSDKLS*DFPGPRSRRVW
Trigger: CCACACCCTCCTTGACCTAGGGCCTGGGAAATCCAAGCTGAGTTTATCAGACCTCCCACTTAGACACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp AGAACTGACAGAGCTGGAGCCCAAACCCAGGACTCTTaGGCTCCAAGTTCAGGGCTTTTCCTACCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: RTDRAGAQTQDS*APSSGLFLPGH
Trigger: GTGGCCTGGTAGGAAAAGCCCTGAACTTGGAGCCAAAGAGTCCTGGGTTTGGGCTCCAGCTCTGTCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 90 bp TCCCTTCCCAAGGAGCAGGAGAGAGTTGGGAGTTCATCTTTGCTCTaGCCAAACATGAGGGCTTCCCAGGATTTGGGGCCACTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SLPKEQERVGSSSLL*PNMRASQDLGPLES
Trigger: GCTTTCCAGTGGCCCCAAATCCTGGGAAGCCCTCATGTTTGGCAAGAGCAAAGATGAACTCCCAACTCTCTCCTGCTCCTTGGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp AAGGGAAGTAAAGTCAGCCCCTGGGCTATCAGCTGCTaGGTGGAAAGTGTTCACTGGCTCTGGTCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: KGSKVSPWAISC*VESVHWLWSAQ
Trigger: CTGAGCAGACCAGAGCCAGTGAACACTTTCCACTCAGCAGCTGATAGCCCAGGGGCTGACTTTACTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp ACGCGGGGAAGGGTGACGAGGATTTGTTGGATCTGGTaGACCCTCTCGGCTGGGTTCTCCAGTTTAATAGTA +
Preference number: 6 (lower is better)
Translates to: TRGRVTRICWIW*TLSAGFSSLIV
Trigger: TACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000475560.5
CDS GCA 72 bp AATAGACTTGGAGGTCAACATCCCAAATGGTGGCAATaGTGTAGGGCAATGCCAGTCGGGCCCTTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: NRLGGQHPKWWQ*CRAMPVGPLEA
Trigger: AGCCTCCAAGGGCCCGACTGGCATTGCCCTACAGCATTGCCACCATTTGGGATGTTGACCTCCAAGTCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp CACACAAGTTGGCCTGACTCAATGGTGCCAGCCTTCTaGGGCAAAGGCCTTTTGAAGGTTAAGAAGAGGGCC +
Preference number: 6 (lower is better)
Translates to: HTSWPDSMVPAF*GKGLLKVKKRA
Trigger: GGCCCTCTTCTTAACCTTCAAAAGGCCTTTGCCCCAGAAGGCTGGCACCATTGAGTCAGGCCAACTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp AGCTGCAGTCGCGACTCTGATTGCTGCTCCAGACATTaGAACTGCTCCACCAGCTGCGTGCGGATCTCTTTT +
Preference number: 6 (lower is better)
Translates to: SCSRDSDCCSRH*NCSTSCVRISF
Trigger: AAAAGAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000470951.5
CDS CAA 72 bp AAGAAAGCGAAAAGCAGGAAAGAGGAAGGTCTGGCCTaGGGCCATTTGGGAGCTCCCTCTCCTTGCGATGCT +
Preference number: 6 (lower is better)
Translates to: KKAKSRKEEGLA*GHLGAPSPCDA
Trigger: AGCATCGCAAGGAGAGGGAGCTCCCAAATGGCCCAAGGCCAGACCTTCCTCTTTCCTGCTTTTCGCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CAA 72 bp CCCAGGAAACTGAAAACCCCAGAGGTTGCCAAGACTTaGCCCAACTCCCTTCCCAAGGAGCAGGAGAGAGTT +
Preference number: 6 (lower is better)
Translates to: PRKLKTPEVAKT*PNSLPKEQERV
Trigger: AACTCTCTCCTGCTCCTTGGGAAGGGAGTTGGGCAAAGTCTTGGCAACCTCTGGGGTTTTCAGTTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 90 bp TCTCATGACCACAATGACCACGCGGGGAAGGGTGACGAGGATTTGTaGGATCTGGTGCACCCTCTCGGCTGGGTTCTCCAGTTTAATAGT +
Preference number: 6 (lower is better)
Translates to: SHDHNDHAGKGDEDL*DLVHPLGWVLQFNS
Trigger: ACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000475560.5
CDS CAA 90 bp GTATCTCATGACCACAATGACCACGCGGGGAAGGGTGACGAGGATTaGTTGGATCTGGTGCACCCTCTCGGCTGGGTTCTCCAGTTTAAT +
Preference number: 6 (lower is better)
Translates to: VSHDHNDHAGKGDED*LDLVHPLGWVLQFN
Trigger: ATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGAGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000475560.5
CDS CAA 90 bp TGTCCTGCACAGCGGGTACTCGGGAGTCAGTGTTCCGTTCTCCATTaGCTTAAGCTGCCCGATTTCTCCCGAGATAACTTCCCCACACAA +
Preference number: 6 (lower is better)
Translates to: CPAQRVLGSQCSVLH*LKLPDFSRDNFPTQ
Trigger: TTGTGTGGGGAAGTTATCTCGGGAGAAATCGGGCAGCTTAAGCAAATGGAGAACGGAACACTGACTCCCGAGTACCCGCTGTGCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 72 bp TCTGCTCCACTTCTTCATCGCTGGTATGAGGCTCAGTaGCATTGTCATGGTCAACTTCATCGATGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: SAPLLHRWYEAQ*HCHGQLHRWPL
Trigger: CAGGGGCCATCGATGAAGTTGACCATGACAATGGCACTGAGCCTCATACCAGCGATGAAGAAGTGGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000520860.1
CDS GCA 72 bp AGCGGGTACTCGGGAGTCAGTGTTCCGTTCTCCATTTaGTTAAGCTGCCCGATTTCTCCCGAGATAACTTCC +
Preference number: 6 (lower is better)
Translates to: SGYSGVSVPFSI*LSCPISPEITS
Trigger: GGAAGTTATCTCGGGAGAAATCGGGCAGCTTAAGCAAATGGAGAACGGAACACTGACTCCCGAGTACCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CCA 72 bp GAAGTAAAGTCAGCCCCTGGGCTATCAGCTGCTGAGTaGAAAGTGTTCACTGGCTCTGGTCTGCTCAGGAAA +
Preference number: 6 (lower is better)
Translates to: EVKSAPGLSAAE*KVFTGSGLLRK
Trigger: TTTCCTGAGCAGACCAGAGCCAGTGAACACTTTCCACTCAGCAGCTGATAGCCCAGGGGCTGACTTTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp CAGCGGGTACTCGGGAGTCAGTGTTCCGTTCTCCATTaGCTTAAGCTGCCCGATTTCTCCCGAGATAACTTC +
Preference number: 6 (lower is better)
Translates to: QRVLGSQCSVLH*LKLPDFSRDNF
Trigger: GAAGTTATCTCGGGAGAAATCGGGCAGCTTAAGCAAATGGAGAACGGAACACTGACTCCCGAGTACCCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CAA 90 bp AGTCTGATGACATCCTCACTGATCTGGGAGAGGCGGACGATGACATaGTTCATGAAGATGTCATTGAGGGTGGCATGGTCTCGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SLMTSSLIWERRTMT*FMKMSLRVAWSRLS
Trigger: GGAGAGCCGAGACCATGCCACCCTCAATGACATCTTCATGAACAATGTCATCGTCCGCCTCTCCCAGATCAGTGAGGATGTCATCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000470951.5
ENST00000618999.4
CDS TCA 72 bp AGAGAGTTGGGAGTTCATCTTTGCTCTTGCCAAACATaGGGGCTTCCCAGGATTTGGGGCCACTGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: RELGVHLCSCQT*GLPRIWGHWKA
Trigger: TGCTTTCCAGTGGCCCCAAATCCTGGGAAGCCCTCATGTTTGGCAAGAGCAAAGATGAACTCCCAACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp CACACAAACCCTCAACTTTCCCCTGAGGGAAGACCCTaGGACCTGGCCAAGTGTTTGATTACAGATCTCCTC +
Preference number: 6 (lower is better)
Translates to: HTNPQLSPEGRP*DLAKCLITDLL
Trigger: GAGGAGATCTGTAATCAAACACTTGGCCAGGTCTCAGGGTCTTCCCTCAGGGGAAAGTTGAGGGTTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp TTGGCTTATTTGCTCATTTCACCACACAAGTTGGCCTaGCTCAATGGTGCCAGCCTTCTGGGGCAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: LAYLLISPHKLA*LNGASLLGQRP
Trigger: AGGCCTTTGCCCCAGAAGGCTGGCACCATTGAGTCAGGCCAACTTGTGTGGTGAAATGAGCAAATAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp AGTCGCGACTCTGATTGCTGCTCCAGACATTTGAACTaGTCCACCAGCTGCGTGCGGATCTCTTTTATTTGG +
Preference number: 6 (lower is better)
Translates to: SRDSDCCSRHLN*STSCVRISFIW
Trigger: CCAAATAAAAGAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000470951.5
CDS GCA 72 bp GGCCCTTGGAGGCTATTCATGGGCTGTGTACTGCGTTaGATCTGCCTGAACAAGATCTCAAGTGATTTCACC +
Preference number: 6 (lower is better)
Translates to: GPWRLFMGCVLR*ICLNKISSDFT
Trigger: GGTGAAATCACTTGAGATCTTGTTCAGGCAGATGCAACGCAGTACACAGCCCATGAATAGCCTCCAAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 90 bp GGGAGTTCATCTTTGCTCTTGCCAAACATGAGGGCTTCCCAGGATTaGGGGCCACTGGAAAGCATTTGTGGGAAAAGAAAGAATGCCCTC +
Preference number: 6 (lower is better)
Translates to: GSSSLLLPNMRASQD*GPLESICGKRKNAL
Trigger: GAGGGCATTCTTTCTTTTCCCACAAATGCTTTCCAGTGGCCCCAAATCCTGGGAAGCCCTCATGTTTGGCAAGAGCAAAGATGAACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 90 bp GACAGTCTTTCTCTGATGTTCTCAGAAGATCCAATCTTTGGGTTCTaGCGTGTTCACTCAGCACTCCTGGGCGTCACCAGAAGCTCCACT +
Preference number: 6 (lower is better)
Translates to: DSLSLMFSEDPIFGF*RVHSALLGVTRSST
Trigger: AGTGGAGCTTCTGGTGACGCCCAGGAGTGCTGAGTGAACACGCAAGAACCCAAAGATTGGATCTTCTGAGAACATCAGAGAAAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS GCA 72 bp TCGGGAGTCAGTGTTCCGTTCTCCATTTGCTTAAGCTaGCCGATTTCTCCCGAGATAACTTCCCCACACAAA +
Preference number: 6 (lower is better)
Translates to: SGVSVPFSICLS*PISPEITSPHK
Trigger: TTTGTGTGGGGAAGTTATCTCGGGAGAAATCGGGCAGCTTAAGCAAATGGAGAACGGAACACTGACTCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 72 bp ACTGAGGCTCGGAGGTGCAAAGTATCAGTGCAGAGATaGCAGACTTTACATCCATGTATCCAGGACCACAAG +
Preference number: 6 (lower is better)
Translates to: TEARRCKVSVQR*QTLHPCIQDHK
Trigger: CTTGTGGTCCTGGATACATGGATGTAAAGTCTGGCATCTCTGCACTGATACTTTGCACCTCCGAGCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480750.3
CDS CCA 72 bp TCTCATTCGCTACTTTCTTTCGCATGTACACGTGTCTaGCTGAGTGGCCCTAGGGGCGCCAAACATTTTACT +
Preference number: 6 (lower is better)
Translates to: SHSLLSFACTRV*LSGPRGAKHFT
Trigger: AGTAAAATGTTTGGCGCCCCTAGGGCCACTCAGCCAGACACGTGTACATGCGAAAGAAAGTAGCGAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS CCA 72 bp CTGTGTTGGCTTATTTGCTCATTTCACCACACAAGTTaGCCTGACTCAATGGTGCCAGCCTTCTGGGGCAAA +
Preference number: 6 (lower is better)
Translates to: LCWLICSFHHTS*PDSMVPAFWGK
Trigger: TTTGCCCCAGAAGGCTGGCACCATTGAGTCAGGCCAACTTGTGTGGTGAAATGAGCAAATAAGCCAACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp ACATCCTCACTGATCTGGGAGAGGCGGACGATGACATaGTTCATGAAGATGTCATTGAGGGTGGCATGGTCT +
Preference number: 6 (lower is better)
Translates to: TSSLIWERRTMT*FMKMSLRVAWS
Trigger: AGACCATGCCACCCTCAATGACATCTTCATGAACAATGTCATCGTCCGCCTCTCCCAGATCAGTGAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000433332.7
ENST00000470951.5
ENST00000618999.4
CDS CAA 72 bp TCTCTGATGTTCTCAGAAGATCCAATCTTTGGGTTCTaGCGTGTTCACTCAGCACTCCTGGGCGTCACCAGA +
Preference number: 6 (lower is better)
Translates to: SLMFSEDPIFGF*RVHSALLGVTR
Trigger: TCTGGTGACGCCCAGGAGTGCTGAGTGAACACGCAAGAACCCAAAGATTGGATCTTCTGAGAACATCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS CAA 90 bp TCACCATTTCTCAAGTACCCTGACCCTTTTGTGACCCCCATACCTTaGCACATGCTGTCTTCTCTTCAGGTAATGCCTTTCACCACCTGG +
Preference number: 6 (lower is better)
Translates to: SPFLKYPDPFVTPIP*HMLSSLQVMPFTTW
Trigger: CCAGGTGGTGAAAGGCATTACCTGAAGAGAAGACAGCATGTGCAAAGGTATGGGGGTCACAAAAGGGTCAGGGTACTTGAGAAATGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490348.1
CDS GCA 72 bp CAGCTGCTGAGTGGAAAGTGTTCACTGGCTCTGGTCTaGTCAGGAAAAAGCGCAAAAGGGAATGTTGAACAA +
Preference number: 6 (lower is better)
Translates to: QLLSGKCSLALV*SGKSAKGNVEQ
Trigger: TTGTTCAACATTCCCTTTTGCGCTTTTTCCTGAGCAGACCAGAGCCAGTGAACACTTTCCACTCAGCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp CACACCACAGTTCACCAGAGAAACAGCCACAAACACTaGACCCGTTTCCAGAATTGCTCACCATGCATATAC +
Preference number: 6 (lower is better)
Translates to: HTTVHQRNSHKH*TRFQNCSPCIY
Trigger: GTATATGCATGGTGAGCAATTCTGGAAACGGGTCCAGTGTTTGTGGCTGTTTCTCTGGTGAACTGTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp CAGTCTTTCTCTGATGTTCTCAGAAGATCCAATCTTTaGGTTCTTGCGTGTTCACTCAGCACTCCTGGGCGT +
Preference number: 6 (lower is better)
Translates to: QSFSDVLRRSNL*VLACSLSTPGR
Trigger: ACGCCCAGGAGTGCTGAGTGAACACGCAAGAACCCAAAGATTGGATCTTCTGAGAACATCAGAGAAAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS CAA 72 bp TCTTTGCTCTTGCCAAACATGAGGGCTTCCCAGGATTaGGGGCCACTGGAAAGCATTTGTGGGAAAAGAAAG +
Preference number: 6 (lower is better)
Translates to: SLLLPNMRASQD*GPLESICGKRK
Trigger: CTTTCTTTTCCCACAAATGCTTTCCAGTGGCCCCAAATCCTGGGAAGCCCTCATGTTTGGCAAGAGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp CCACACATGACAAGCAAAGACCTGGTCCCCCAAGTCTaGATTGATTTCTGTGAGCGGGCAAGAAATCTTCCA +
Preference number: 6 (lower is better)
Translates to: PHMTSKDLVPQV*IDFCERARNLP
Trigger: TGGAAGATTTCTTGCCCGCTCACAGAAATCAATCAAGACTTGGGGGACCAGGTCTTTGCTTGTCATGTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp CTCAAGTACCCTGACCCTTTTGTGACCCCCATACCTTaGCACATGCTGTCTTCTCTTCAGGTAATGCCTTTC +
Preference number: 6 (lower is better)
Translates to: LKYPDPFVTPIP*HMLSSLQVMPF
Trigger: GAAAGGCATTACCTGAAGAGAAGACAGCATGTGCAAAGGTATGGGGGTCACAAAAGGGTCAGGGTACTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490348.1
CDS CAA 90 bp ACAGCTCTGGTCGATTTCACAGGTTTAGGGACTAATCTCTTTCACTaGGCTGCAGAGCAGGGAGAAAAATCCTTCTCCTTCTGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: TALVDFTGLGTNLFH*AAEQGEKSFSFWKE
Trigger: TTCCTTCCAGAAGGAGAAGGATTTTTCTCCCTGCTCTGCAGCCAAGTGAAAGAGATTAGTCCCTAAACCTGTGAAATCGACCAGAGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000490348.1
CDS TCA 72 bp ATTCGCTACTTTCTTTCGCATGTACACGTGTCTGGCTaGGTGGCCCTAGGGGCGCCAAACATTTTACTAATA +
Preference number: 6 (lower is better)
Translates to: IRYFLSHVHVSG*VALGAPNILLI
Trigger: TATTAGTAAAATGTTTGGCGCCCCTAGGGCCACTCAGCCAGACACGTGTACATGCGAAAGAAAGTAGCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS TCA 72 bp GGCTATTCATGGGCTGTGTACTGCGTTGCATCTGCCTaGACAAGATCTCAAGTGATTTCACCTCTAATCCAG +
Preference number: 6 (lower is better)
Translates to: GYSWAVYCVASA*TRSQVISPLIQ
Trigger: CTGGATTAGAGGTGAAATCACTTGAGATCTTGTTCAGGCAGATGCAACGCAGTACACAGCCCATGAATAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp AACGTTAGCAAATACCATGGTAGGACACAAGGCCCCTaGCTCTCCGCTTTCAGCTTACTGAAGATCCTCAAA +
Preference number: 6 (lower is better)
Translates to: NVSKYHGRTQGP*LSAFSLLKILK
Trigger: TTTGAGGATCTTCAGTAAGCTGAAAGCGGAGAGTCAGGGGCCTTGTGTCCTACCATGGTATTTGCTAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS TCA 72 bp AGGAGTGTGGAGGGACCTTTCTCAGCTGTGAGATTATaGACCCAATGTTCAAGGCTCCAAAGTTTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: RSVEGPFSAVRL*TQCSRLQSFAV
Trigger: CACAGCAAAACTTTGGAGCCTTGAACATTGGGTTCATAATCTCACAGCTGAGAAAGGTCCCTCCACACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS GCA 72 bp GATTGCTGCTCCAGACATTTGAACTGCTCCACCAGCTaGGTGCGGATCTCTTTTATTTGGGCTTCATATTCA +
Preference number: 6 (lower is better)
Translates to: DCCSRHLNCSTS*VRISFIWASYS
Trigger: TGAATATGAAGCCCAAATAAAAGAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000470951.5
CDS CAA 90 bp GCCTATTGGCCATTAAGAGTCACTCGACTTGTATCCACAGAGCACTaGACAGTTTTCACACACGTACGTTTAAGCCTCATCAGAGTCTTG +
Preference number: 6 (lower is better)
Translates to: AYWPLRVTRLVSTEH*TVFTHVRLSLIRVL
Trigger: CAAGACTCTGATGAGGCTTAAACGTACGTGTGTGAAAACTGTCAAGTGCTCTGTGGATACAAGTCGAGTGACTCTTAATGGCCAATAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433332.7
ENST00000618999.4
CDS TCA 72 bp TCTTTGTGTGGTGCTCTGTGCACTGTCTGGAATCTCTaGCAAGGAAACGTAGCTATCCCAACTTTGCACAAT +
Preference number: 6 (lower is better)
Translates to: SLCGALCTVWNL*QGNVAIPTLHN
Trigger: ATTGTGCAAAGTTGGGATAGCTACGTTTCCTTGTCAGAGATTCCAGACAGTGCACAGAGCACCACACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp AATCTCTTTACTTGCCGAGAAATGGCTCTAGTAGCTTaGCCTGGTCAGCTCCTCTTGCAAAAGAAGAATCAC +
Preference number: 6 (lower is better)
Translates to: NLFTCREMALVA*PGQLLLQKKNH
Trigger: GTGATTCTTCTTTTGCAAGAGGAGCTGACCAGGGCAAGCTACTAGAGCCATTTCTCGGCAAGTAAAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000490348.1
CDS GCA 72 bp GTCCACATTTCCCTCTACCTCTCTCACTGTGACCCCTaGCACTTAGTATTAAAATCACCTATCAACATGTCC +
Preference number: 6 (lower is better)
Translates to: VHISLYLSHCDP*HLVLKSPINMS
Trigger: GGACATGTTGATAGGTGATTTTAATACTAAGTGGCAGGGGTCACAGTGAGAGAGGTAGAGGGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 72 bp TTTCTCTTCTTTAGGGTGGTGTGCATGCATCCCCTCTaGCTGGAATACCCTTCTTTCGGAATTCAGTTTAGA +
Preference number: 6 (lower is better)
Translates to: FLFFRVVCMHPL*LEYPSFGIQFR
Trigger: TCTAAACTGAATTCCGAAAGAAGGGTATTCCAGGCAGAGGGGATGCATGCACACCACCCTAAAGAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 72 bp TGGAGGCTATTCATGGGCTGTGTACTGCGTTGCATCTaGCTGAACAAGATCTCAAGTGATTTCACCTCTAAT +
Preference number: 6 (lower is better)
Translates to: WRLFMGCVLRCI*LNKISSDFTSN
Trigger: ATTAGAGGTGAAATCACTTGAGATCTTGTTCAGGCAGATGCAACGCAGTACACAGCCCATGAATAGCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp AGAAACAGCCACAAACACTGGACCCGTTTCCAGAATTaGTCACCATGCATATACCTGTGTTGGCTTATTTGC +
Preference number: 6 (lower is better)
Translates to: RNSHKHWTRFQN*SPCIYLCWLIC
Trigger: GCAAATAAGCCAACACAGGTATATGCATGGTGAGCAATTCTGGAAACGGGTCCAGTGTTTGTGGCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp ATTTCCAGCCAAGGACTCATCTACCCCAGTAACCTTTaGCATGGGATCAGGTTGAAAGTGTCTTGCTTTACT +
Preference number: 6 (lower is better)
Translates to: ISSQGLIYPSNL*HGIRLKVSCFT
Trigger: AGTAAAGCAAGACACTTTCAACCTGATCCCATGGCAAAGGTTACTGGGGTAGATGAGTCCTTGGCTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp GACGAGGATTTGTTGGATCTGGTGCACCCTCTCGGCTaGGTTCTCCAGTTTAATAGTAGATATCAAATCTTG +
Preference number: 6 (lower is better)
Translates to: DEDLLDLVHPLG*VLQFNSRYQIL
Trigger: CAAGATTTGATATCTACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000475560.5
CDS CAA 72 bp GTCGATTTCACAGGTTTAGGGACTAATCTCTTTCACTaGGCTGCAGAGCAGGGAGAAAAATCCTTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: VDFTGLGTNLFH*AAEQGEKSFSF
Trigger: GAAGGAGAAGGATTTTTCTCCCTGCTCTGCAGCCAAGTGAAAGAGATTAGTCCCTAAACCTGTGAAATCGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000490348.1
CDS CAA 90 bp AGTTCACCAGAGAAACAGCCACAAACACTGGACCCGTTTCCAGAATaGCTCACCATGCATATACCTGTGTTGGCTTATTTGCTCATTTCA +
Preference number: 6 (lower is better)
Translates to: SSPEKQPQTLDPFPE*LTMHIPVLAYLLIS
Trigger: TGAAATGAGCAAATAAGCCAACACAGGTATATGCATGGTGAGCAATTCTGGAAACGGGTCCAGTGTTTGTGGCTGTTTCTCTGGTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp TTGAACATTCCCAGATCATTTCCTTATCACATTGCATaGCAACCTCACAACAACCCTGTGAGGCTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: LNIPRSFPYHIA*QPHNNPVRLGK
Trigger: CTTTCCCAGCCTCACAGGGTTGTTGTGAGGTTGTCATGCAATGTGATAAGGAAATGATCTGGGAATGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp TGTGTGAATCACACGAGGATTTCTTTCTTTGTGTGGTaGTCTGTGCACTGTCTGGAATCTCTGACAAGGAAA +
Preference number: 6 (lower is better)
Translates to: CVNHTRISFFVW*SVHCLESLTRK
Trigger: TTTCCTTGTCAGAGATTCCAGACAGTGCACAGAGCACCACACAAAGAAAGAAATCCTCGTGTGATTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp GTTTTTGAACATTCCCAGATCATTTCCTTATCACATTaGATGACAACCTCACAACAACCCTGTGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: VFEHSQIISLSH*MTTSQQPCEAG
Trigger: CCCAGCCTCACAGGGTTGTTGTGAGGTTGTCATGCAATGTGATAAGGAAATGATCTGGGAATGTTCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp CACAAACACTGGACCCGTTTCCAGAATTGCTCACCATaGATATACCTGTGTTGGCTTATTTGCTCATTTCAC +
Preference number: 6 (lower is better)
Translates to: HKHWTRFQNCSP*IYLCWLICSFH
Trigger: GTGAAATGAGCAAATAAGCCAACACAGGTATATGCATGGTGAGCAATTCTGGAAACGGGTCCAGTGTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS GCA 72 bp GAGATTATGAACCCAATGTTCAAGGCTCCAAAGTTTTaGTGTGGTGTGGATGGTAAGGACAGTCTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: EIMNPMFKAPKF*CGVDGKDSLSL
Trigger: CAGAGAAAGACTGTCCTTACCATCCACACCACAGCAAAACTTTGGAGCCTTGAACATTGGGTTCATAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490889.2
CDS CAA 72 bp AAATCTCTTTACTTGCCGAGAAATGGCTCTAGTAGCTaGCCCTGGTCAGCTCCTCTTGCAAAAGAAGAATCA +
Preference number: 6 (lower is better)
Translates to: KSLYLPRNGSSS*PWSAPLAKEES
Trigger: TGATTCTTCTTTTGCAAGAGGAGCTGACCAGGGCAAGCTACTAGAGCCATTTCTCGGCAAGTAAAGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360413.7
ENST00000383836.8
ENST00000490348.1
CDS CAA 90 bp AGCCAAGGACTCATCTACCCCAGTAACCTTTGCCATGGGATCAGGTaGAAAGTGTCTTGCTTTACTTTAGGATTTCCATTCCTAAAGTGT +
Preference number: 6 (lower is better)
Translates to: SQGLIYPSNLCHGIR*KVSCFTLGFPFLKC
Trigger: ACACTTTAGGAATGGAAATCCTAAAGTAAAGCAAGACACTTTCAACCTGATCCCATGGCAAAGGTTACTGGGGTAGATGAGTCCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp ATTTTTCCTGCCCAATCCAGAAAGCAAAGGACTGTGTaGATCACACGAGGATTTCTTTCTTTGTGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: IFPAQSRKQRTV*ITRGFLSLCGA
Trigger: AGCACCACACAAAGAAAGAAATCCTCGTGTGATTCACACAGTCCTTTGCTTTCTGGATTGGGCAGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CAA 72 bp GAGACTTTTAGTTTACTAACAAAGTTGTCTTTGACCTaGACCAGGAACCAGAGTACACAGGGCTATGTCTGC +
Preference number: 6 (lower is better)
Translates to: ETFSLLTKLSLT*TRNQSTQGYVC
Trigger: GCAGACATAGCCCTGTGTACTCTGGTTCCTGGTCAAGGTCAAAGACAACTTTGTTAGTAAACTAAAAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS CCA 72 bp CCAAACATTTTACTAATAACATCTCCTTTACCACACTaGGAAATCCCCCAAGGCATGAACTGTGTATGGTTC +
Preference number: 6 (lower is better)
Translates to: PNILLITSPLPH*EIPQGMNCVWF
Trigger: GAACCATACACAGTTCATGCCTTGGGGGATTTCCCAGTGTGGTAAAGGAGATGTTATTAGTAAAATGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470951.5
CDS GCA 72 bp AAATCCATTATTATACTTAATACCATCTCAACCCTGTaGATGTGGCCCCATTTTACAGAGGCAGAGACTGAA +
Preference number: 6 (lower is better)
Translates to: KSIIILNTISTL*MWPHFTEAETE
Trigger: TTCAGTCTCTGCCTCTGTAAAATGGGGCCACATGCACAGGGTTGAGATGGTATTAAGTATAATAATGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485983.6
CDS TCA 72 bp GTACATGTGGTAGGTTTTCATGACAGGGGAAATTTCTaGGCCAGAAGAAATTCTAGACATCATCTAATCCAA +
Preference number: 6 (lower is better)
Translates to: VHVVGFHDRGNF*ARRNSRHHLIQ
Trigger: TTGGATTAGATGATGTCTAGAATTTCTTCTGGCTCAGAAATTTCCCCTGTCATGAAAACCTACCACATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480750.3
CDS TCA 72 bp CTTATCACATTGCATGACAACCTCACAACAACCCTGTaGGGCTGGGAAAGAATATTCAATTCACTTTACATA +
Preference number: 6 (lower is better)
Translates to: LITLHDNLTTTL*GWERIFNSLYI
Trigger: TATGTAAAGTGAATTGAATATTCTTTCCCAGCCTCACAGGGTTGTTGTGAGGTTGTCATGCAATGTGATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485983.6