Pregenerated sensors for SRGAP2B (Homo sapiens)
Ensembl gene IDs: ENSG00000196369Ensembl transcript IDs: ENST00000612199.4
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGCTGCTCTTTCCTCAAGGAATGCGATTCTCCTCCCCGACTCCCTaGCTGGTTCGCTCATTCTTCAAGATCAAACACAAAAGTCACTGT | + |
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Preference number: 1 (lower is better) Translates to: MLLFPQGMRFSSPTP*LVRSFFKIKHKSHC Trigger: ACAGTGACTTTTGTGTTTGATCTTGAAGAATGAGCGAACCAGGCAGGGAGTCGGGGAGGAGAATCGCATTCCTTGAGGAAAGAGCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR CCA 90 bp | TGCTCTTTCCTCAAGGAATGCGATTCTCCTCCCCGACTCCCTGCCTaGTTCGCTCATTCTTCAAGATCAAACACAAAAGTCACTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: CSFLKECDSPPRLPA*FAHSSRSNTKVTVC Trigger: ACACACAGTGACTTTTGTGTTTGATCTTGAAGAATGAGCGAACCAGGCAGGGAGTCGGGGAGGAGAATCGCATTCCTTGAGGAAAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR GCA 90 bp | TTAACATGTGAGCCAGGTTATTGCGTGCATTTATGTTTTCCCACATaGTGCTCTTTCCTCAAGGAATGCGATTCTCCTCCCCGACTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LTCEPGYCVHLCFPT*CSFLKECDSPPRLP Trigger: AGGGAGTCGGGGAGGAGAATCGCATTCCTTGAGGAAAGAGCAGCATGTGGGAAAACATAAATGCACGCAATAACCTGGCTCACATGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR CCA 90 bp | CAAGTAATCATTGTCCAGCAAAATATGTCTGTAGGCCATGCAGACTaGCTTTGTGCTGGGTTCTTTAAAGCCGGCACAAAGTGTGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: QVIIVQQNMSVGHAD*LCAGFFKAGTKCVF Trigger: GAACACACACTTTGTGCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATTTTGCTGGACAATGATTACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTCACCCAGGCTGGAGTaGAGTGACACGATCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: NMSVGHADWLCAGFFKAGSPRLE*SDTILA Trigger: AGCCAAGATCGTGTCACTGCACTCCAGCCTGGGTGA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTCTTTCCTCAAGGAATaGGATTCTCCTCCCCGACTC | + |
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Preference number: 2 (lower is better) Translates to: NMSVGHADWLCAGFFKAGSFLKE*DSPPRL Trigger: GAGTCGGGGAGGAGAATCGCATTCCTTGAGGAAAGA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCGCTCACTACAACCTATaGCTCCCCGGTTCAAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: NMSVGHADWLCAGFFKAGAHYNL*LPGSSN Trigger: ATTACTTGAACCGGGGAGGCATAGGTTGTAGTGAGC...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR TCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTGTTCACTCTTGCACTaGGTGAAGTTCAAGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: NMSVGHADWLCAGFFKAGCSLLH*VKFKFT Trigger: AGTGAACTTGAACTTCACTCAGTGCAAGAGTGAACA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTTATGTTTTCCCACATaGTGCTCTTTCCTCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: NMSVGHADWLCAGFFKAGLCFPT*CSFLKE Trigger: TTCCTTGAGGAAAGAGCAGCATGTGGGAAAACATAA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCAGCCAGGTTATTGCGTaGATTTATGTTTTCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: NMSVGHADWLCAGFFKAGSQVIA*IYVFPH Trigger: ATGTGGGAAAACATAAATGCACGCAATAACCTGGCT...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATCCTCCCCGACTCCCTaGCTGGTTCGCTCATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLSSPTP*LVRSFF Trigger: GAAGAATGAGCGAACCAGGCAGGGAGTCGGGGAGGA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTACTCTTGCACAGAGCTTaGACTGAGGGGAGGGATCGG | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLLLHRA*TEGRDR Trigger: CCGATCCCTCCCCTCAGTGCAAGCTCTGTGCAAGAG...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTACTGGTCTTGAACTCCTaGCCTCAAGAGACCCACCCG | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLLVLNS*PQETHP Trigger: CGGGTGGGTCTCTTGAGGCCAGGAGTTCAAGACCAG...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATGTCCAGGCTGGTCTTaGACTCCTGGCCTCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLCPGWS*TPGLKR Trigger: TCTCTTGAGGCCAGGAGTTCAAGACCAGCCTGGACA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTAGCAGTGACACGATCTTaGCTCACTACAACCTATGCC | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLAVTRS*LTTTYA Trigger: GGCATAGGTTGTAGTGAGCCAAGATCGTGTCACTGC...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTAGTAGGCCATGCAGACTaGCTTTGTGCTGGGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLVGHAD*LCAGFF Trigger: AAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTAC...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTAAGTTCTCTTAACATGTaGGCCAGGTTATTGCGTGCA | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLSSLNM*ARLLRA Trigger: TGCACGCAATAACCTGGCTCACATGTTAAGAGAACT...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATGTAGGGTCTTCTTATaGCATTTGTCAGCATGTGGC | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLCRVFL*HLSACG Trigger: GCCACATGCTGACAAATGTCATAAGAAGACCCTACA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATGTTTTCCCACATGCTaGTCTTTCCTCAAGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLCFPTC*SFLKEC Trigger: GCATTCCTTGAGGAAAGAGCAGCATGTGGGAAAACA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATGTGAGCCAGGTTATTaGGTGCATTTATGTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLCEPGY*VHLCFP Trigger: GGGAAAACATAAATGCACGCAATAACCTGGCTCACA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATTTTGTTCCTTTGAATaGGCCACACTTTCCCATTCT | + |
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Preference number: 2 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLFCSFE*ATLSHS Trigger: AGAATGGGAAAGTGTGGCTCATTCAAAGGAACAAAA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| 3UTR TCA 72 bp | TTAAAGCCGGCACAAAGTGTGTGTTCACTCTTGCACTaGGTGAAGTTCAAGTTCACTCTTGCACAGAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LKPAQSVCSLLH*VKFKFTLAQSL Trigger: CAAGCTCTGTGCAAGAGTGAACTTGAACTTCACTCAGTGCAAGAGTGAACACACACTTTGTGCCGGCTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTTGCTCCGGTTCACTTaGCTGGCTCTGACGCGACGG | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGLLRFT*LALTRR Trigger: CCGTCGCGTCAGAGCCAGGCAAGTGAACCGGAGCAA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTCCTCCCCGACTCCCTaGCTGGTTCGCTCATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGSSPTP*LVRSFF Trigger: GAAGAATGAGCGAACCAGGCAGGGAGTCGGGGAGGA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCCTCTTGCACAGAGCTTaGACTGAGGGGAGGGATCGG | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGLLHRA*TEGRDR Trigger: CCGATCCCTCCCCTCAGTGCAAGCTCTGTGCAAGAG...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTGCTGGGCACAGAGCTaGGAAGCCATATCCCCCATG | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGCWAQS*EAISPM Trigger: CATGGGGGATATGGCTTCCCAGCTCTGTGCCCAGCA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCCTGGTCTTGAACTCCTaGCCTCAAGAGACCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGLVLNS*PQETHP Trigger: CGGGTGGGTCTCTTGAGGCCAGGAGTTCAAGACCAG...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR TCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTGTCCAGGCTGGTCTTaGACTCCTGGCCTCAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGCPGWS*TPGLKR Trigger: TCTCTTGAGGCCAGGAGTTCAAGACCAGCCTGGACA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCGTAGGCCATGCAGACTaGCTTTGTGCTGGGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGVGHAD*LCAGFF Trigger: AAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTAC...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR TCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCAGTTCTCTTAACATGTaGGCCAGGTTATTGCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGSSLNM*ARLLRA Trigger: TGCACGCAATAACCTGGCTCACATGTTAAGAGAACT...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTGTTTTCCCACATGCTaGTCTTTCCTCAAGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGCFPTC*SFLKEC Trigger: GCATTCCTTGAGGAAAGAGCAGCATGTGGGAAAACA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR GCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTGTGAGCCAGGTTATTaGGTGCATTTATGTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGCEPGY*VHLCFP Trigger: GGGAAAACATAAATGCACGCAATAACCTGGCTCACA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTTGACAGTGATTTTCTaGTATGTCAGGAGCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGLTVIF*YVRSQS Trigger: TGATTGGCTCCTGACATACCAGAAAATCACTGTCAA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR TCA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTTTATTTTGTTCCTTTaGATGAGCCACACTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: NMSVGHADWLCAGFFKAGFILFL*MSHTFP Trigger: TGGGAAAGTGTGGCTCATTCAAAGGAACAAAATAAA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATCCGTGTACTTGGCTTaGCGCTTCTCCTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLSVYLA*RFSFIF Trigger: GAAGATGAAGGAGAAGCGCCAAGCCAAGTACACGGA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR TCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATGTTCACTCTTGCACTaGGTGAAGTTCAAGTTCACT | + |
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Preference number: 4 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLCSLLH*VKFKFT Trigger: AGTGAACTTGAACTTCACTCAGTGCAAGAGTGAACA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR GCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATTATGTTTTCCCACATaGTGCTCTTTCCTCAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLLCFPT*CSFLKE Trigger: TTCCTTGAGGAAAGAGCAGCATGTGGGAAAACATAA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR GCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTAAGCCAGGTTATTGCGTaGATTTATGTTTTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLSQVIA*IYVFPH Trigger: ATGTGGGAAAACATAAATGCACGCAATAACCTGGCT...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR GCA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTAGGCTTCCTCTGTGTGTaGAAATATACTCTTAAATCC | + |
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Preference number: 4 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLGFLCV*KYTLKS Trigger: GGATTTAAGAGTATATTTGCACACACAGAGGAAGCC...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CAA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTATTTGCTCCGGTTCACTaGCCTGGCTCTGACGCGACG | + |
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Preference number: 5 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLFAPVH*PGSDAT Trigger: CGTCGCGTCAGAGCCAGGCAAGTGAACCGGAGCAAA...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CAA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCTGCTCACATATGTGTTaGTGCATGCATAGAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: NMSVGHADWLCAGFFKAGCSHMC*CMHRKQ Trigger: CTGTTTTCTATGCATGCACAAACACATATGTGAGCA...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CAA 90 bp | AATATGTCTGTAGGCCATGCAGACTGGCTTTGTGCTGGGTTCTTTAAAGCCGGCCTTTATTTTGTTCCTTaGAATGAGCCACACTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: NMSVGHADWLCAGFFKAGLYFVP*NEPHFP Trigger: GGGAAAGTGTGGCTCATTCAAAGGAACAAAATAAAG...GCCGGCTTTAAAGAACCCAGCACAAAGCCAGTCTGCATGGCCTACAGACATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CAA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTACTCCGTGTACTTGGCTaGGCGCTTCTCCTTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLLRVLG*ALLLHL Trigger: AAGATGAAGGAGAAGCGCCAAGCCAAGTACACGGAG...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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| CDS-3UTR CAA 90 bp | TTGTCTGGTAAGTTTGATGTCTGGGTTTCTTTAGGGATATTTTCTGTCACTTTAAGTTCAAGTTCACTCTaGCACAGAGCTTGCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: LSGKFDVWVSLGIFSVTLSSSSL*HRACTE Trigger: CTCAGTGCAAGCTCTGTGCAAGAGTGAACTTGAACT...TAAAGTGACAGAAAATATCCCTAAAGAAACCCAGACATCAAACTTACCAGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612199.4 |
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