RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRGAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000266028

Ensembl transcript IDs: ENST00000573034.7, ENST00000573034.8, ENST00000604010.1, ENST00000604247.1, ENST00000604419.1, ENST00000604925.5, ENST00000605476.5, ENST00000605610.5, ENST00000624686.1, ENST00000624873.3

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAAGGACAGTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTaGCAGGACACCGCCACACACTGTCGTAGCGCCTCTAGCCCCGCT +
Preference number: 1 (lower is better)
Translates to: VRTVNCVVALETAAS*QDTATHCRSASSPA
Trigger: AGCGGGGCTAGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGACTGTCCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR GCA 90 bp AGCAGCATCCTCAGCCCTGTCCGCCTTGCAGCAGCAATGACCACATaGAAACTGTTAGGCTGGGGGAGCTGGGAGCCCTACGTGCAGCAC +
Preference number: 1 (lower is better)
Translates to: SSILSPVRLAAAMTT*KLLGWGSWEPYVQH
Trigger: GTGCTGCACGTAGGGCTCCCAGCTCCCCCAGCCTAACAGTTTGCATGTGGTCATTGCTGCTGCAAGGCGGACAGGGCTGAGGATGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CCA 90 bp AGGCTGGGGGAGCTGGGAGCCCTACGTGCAGCACAGGAATGGAGATaGGGGTTAGGCCAGAGGGTGAGGCTGGGTGTTGCAAGTCATTCA +
Preference number: 1 (lower is better)
Translates to: RLGELGALRAAQEWR*GLGQRVRLGVASHS
Trigger: TGAATGACTTGCAACACCCAGCCTCACCCTCTGGCCTAACCCCCATCTCCATTCCTGTGCTGCACGTAGGGCTCCCAGCTCCCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CCA 90 bp ACTGTTAGGCTGGGGGAGCTGGGAGCCCTACGTGCAGCACAGGAATaGAGATGGGGGTTAGGCCAGAGGGTGAGGCTGGGTGTTGCAAGT +
Preference number: 1 (lower is better)
Translates to: TVRLGELGALRAAQE*RWGLGQRVRLGVAS
Trigger: ACTTGCAACACCCAGCCTCACCCTCTGGCCTAACCCCCATCTCCATTCCTGTGCTGCACGTAGGGCTCCCAGCTCCCCCAGCCTAACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CCA 90 bp GGAACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTaGAGACCTGGACCTGCCCCGAGGCTTGTAGCAGCATCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: GTHSKAPFHSTRAAS*RPGPAPRLVAASSA
Trigger: GGCTGAGGATGCTGCTACAAGCCTCGGGGCAGGTCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR GCA 90 bp CTCTTCTGCATGGGAAGTAGATCTGCACCAGCCCTTCCAGTGCTCTaGGCATCCCGGTGCTGGCATCACCGCTCCTCATCTCCTTGGGGA +
Preference number: 1 (lower is better)
Translates to: LFCMGSRSAPALPVL*ASRCWHHRSSSPWG
Trigger: TCCCCAAGGAGATGAGGAGCGGTGATGCCAGCACCGGGATGCGCAGAGCACTGGAAGGGCTGGTGCAGATCTACTTCCCATGCAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR GCA 90 bp ATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTaGTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCTG +
Preference number: 1 (lower is better)
Translates to: ISNPYSSGAPWGLSS*WHGARFQGLAERGL
Trigger: CAGACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR CCA 90 bp CCTGTCCGCCTTGCAGCAGCAATGACCACATGCAAACTGTTAGGCTaGGGGAGCTGGGAGCCCTACGTGCAGCACAGGAATGGAGATGGG +
Preference number: 1 (lower is better)
Translates to: PVRLAAAMTTCKLLG*GSWEPYVQHRNGDG
Trigger: CCCATCTCCATTCCTGTGCTGCACGTAGGGCTCCCAGCTCCCCCAGCCTAACAGTTTGCATGTGGTCATTGCTGCTGCAAGGCGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR TCA 90 bp CCTCCTGGAGAAGGAGGCGGCAAGTCCAGGTTGTGGTTTATCGGCTaGGGTCCTGAGCACTGCCGGGTAAGGACAGTCAACTGTGTGGTG +
Preference number: 1 (lower is better)
Translates to: PPGEGGGKSRLWFIG*GPEHCRVRTVNCVV
Trigger: CACCACACAGTTGACTGTCCTTACCCGGCAGTGCTCAGGACCTCAGCCGATAAACCACAACCTGGACTTGCCGCCTCCTTCTCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR TCA 90 bp AGAAGGAGGCGGCAAGTCCAGGTTGTGGTTTATCGGCTGAGGTCCTaGGCACTGCCGGGTAAGGACAGTCAACTGTGTGGTGGCTCTGGA +
Preference number: 1 (lower is better)
Translates to: RRRRQVQVVVYRLRS*ALPGKDSQLCGGSG
Trigger: TCCAGAGCCACCACACAGTTGACTGTCCTTACCCGGCAGTGCTCAGGACCTCAGCCGATAAACCACAACCTGGACTTGCCGCCTCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR TCA 90 bp AACCATCTGGTCAAGGCATCACCGTGGTCTGAGGGGACTGAGACTTaGGCCCATGTCCTCAGGACTGCCTTACCAGATTTCACAGTGACC +
Preference number: 1 (lower is better)
Translates to: NHLVKASPWSEGTET*AHVLRTALPDFTVT
Trigger: GGTCACTGTGAAATCTGGTAAGGCAGTCCTGAGGACATGGGCTCAAGTCTCAGTCCCCTCAGACCACGGTGATGCCTTGACCAGATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR CCA 90 bp GCACGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTaGAGTTTAAACCCCAGGATGTTGCTAACAGCCACAATGAAAGCT +
Preference number: 1 (lower is better)
Translates to: ARRRRIPLDSQIGRG*SLNPRMLLTATMKA
Trigger: AGCTTTCATTGTGGCTGTTAGCAACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR TCA 90 bp TTGGGTATGAAAGCCCCGTTGGCTTGGGACCTGTGTAGGCCCAGGTaGCAGGCAAGAACAGGTCAGGAAACAGCAACAAAAATCAAGACT +
Preference number: 1 (lower is better)
Translates to: LGMKAPLAWDLCRPR*QARTGQETATKIKT
Trigger: AGTCTTGATTTTTGTTGCTGTTTCCTGACCTGTTCTTGCCTGTCACCTGGGCCTACACAGGTCCCAAGCCAACGGGGCTTTCATACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR CCA 90 bp GCTTTGGTCAAAGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTaGACAGACACTGCGGGAACACACAGTAAAGCACCCTTCCACAGC +
Preference number: 1 (lower is better)
Translates to: ALVKVLAVRLPQRSG*TDTAGTHSKAPFHS
Trigger: GCTGTGGAAGGGTGCTTTACTGTGTGTTCCCGCAGTGTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACTTTGACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR TCA 90 bp CCCACCTGGTGTAACATCAGCCTAGTAGAAGCCACACACAGACTCTaGATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAAGA +
Preference number: 1 (lower is better)
Translates to: PTWCNISLVEATHRL*IFARTRVKEDRHQR
Trigger: TCTTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTGTGGCTTCTACTAGGCTGATGTTACACCAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR TCA 90 bp GAAAGCCCCTTCTCCCCCACAATTCATCTTCTCTTGATCCTGTGGTaGAGTCATAATGCTAAATTTGGGAGGGTCCTGTCCACGCACAGA +
Preference number: 1 (lower is better)
Translates to: ESPFSPTIHLLLILW*SHNAKFGRVLSTHR
Trigger: TCTGTGCGTGGACAGGACCCTCCCAAATTTAGCATTATGACTTCACCACAGGATCAAGAGAAGATGAATTGTGGGGGAGAAGGGGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR TCA 90 bp TGGACACTGATCAAGGGGATGGTGAACACGAGTCATGTACAGGGTTaGAAGAGAAATAAGGCAGGAGCAACAGAACAGGCCCAAAGTGTT +
Preference number: 1 (lower is better)
Translates to: WTLIKGMVNTSHVQG*KRNKAGATEQAQSV
Trigger: AACACTTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAACCCTGTACATGACTCGTGTTCACCATCCCCTTGATCAGTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR TCA 90 bp TTCCTCCACAGGAGTGAATGCAGGACAGGGGGAGGAACAGACACATaGTATCTCAATAAACCCACCTGGTGTAACATCAGCCTAGTAGAA +
Preference number: 1 (lower is better)
Translates to: FLHRSECRTGGGTDT*YLNKPTWCNISLVE
Trigger: TTCTACTAGGCTGATGTTACACCAGGTGGGTTTATTGAGATATCATGTGTCTGTTCCTCCCCCTGTCCTGCATTCACTCCTGTGGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR GCA 90 bp AAGTTTGTGATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTaGCACAATAACTTACAAAGAGACTGGTCTATGACCAGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: KFVMETETPGGYCVN*HNNLQRDWSMTRRG
Trigger: GCCTCTCCTGGTCATAGACCAGTCTCTTTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCATCACAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR GCA 90 bp CAGAAAACACAGAGAAGAAGGATGAGTTTCAGCTTTAACTCAAGTTaGTGTCTGAGACCCATGAGCCTGGCTGTGGATGTGTCTGGTCCT +
Preference number: 1 (lower is better)
Translates to: QKTQRRRMSFSFNSS*CLRPMSLAVDVSGP
Trigger: AGGACCAGACACATCCACAGCCAGGCTCATGGGTCTCAGACAGCAACTTGAGTTAAAGCTGAAACTCATCCTTCTTCTCTGTGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR GCA 90 bp TCTTCTAGGCTGACTCACTTCACTGAAAGAGTTCTTCAGTTCTCCTaGCTAGCACTTGGAAAGGTTTCTCTGGTGCTGCAGGTTAGCCTT +
Preference number: 1 (lower is better)
Translates to: SSRLTHFTERVLQFS*LALGKVSLVLQVSL
Trigger: AAGGCTAACCTGCAGCACCAGAGAAACCTTTCCAAGTGCTAGGCAGGAGAACTGAAGAACTCTTTCAGTGAAGTGAGTCAGCCTAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR CCA 90 bp ATGGAGGAGAGGCAAGAGCAAACACCAATGACCAATTCACATCAATaGAAAGAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACG +
Preference number: 1 (lower is better)
Translates to: MEERQEQTPMTNSHQ*KEHREKAPNPKQVT
Trigger: CGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTCTCCTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR TCA 90 bp AGACTTGAGCCCATGTCCTCAGGACTGCCTTACCAGATTTCACAGTaGCCTGATAATGAAAACCTGTCTCTGGCTAACCTAAGAACGGTA +
Preference number: 1 (lower is better)
Translates to: RLEPMSSGLPYQISQ*PDNENLSLANLRTV
Trigger: TACCGTTCTTAGGTTAGCCAGAGACAGGTTTTCATTATCAGGTCACTGTGAAATCTGGTAAGGCAGTCCTGAGGACATGGGCTCAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR CCA 90 bp CCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAAAGAGACTaGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAA +
Preference number: 1 (lower is better)
Translates to: PGGYCVNCHNNLQRD*SMTRRGYTCQRLEK
Trigger: TTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCTTTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR TCA 90 bp CTGATGACAAAGAAAGCCCCTTCTCCCCCACAATTCATCTTCTCTTaGTCCTGTGGTGAAGTCATAATGCTAAATTTGGGAGGGTCCTGT +
Preference number: 1 (lower is better)
Translates to: LMTKKAPSPPQFIFS*SCGEVIMLNLGGSC
Trigger: ACAGGACCCTCCCAAATTTAGCATTATGACTTCACCACAGGATCAAGAGAAGATGAATTGTGGGGGAGAAGGGGCTTTCTTTGTCATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR CCA 90 bp GACAGGCAAGAACAGGTCAGGAAACAGCAACAAAAATCAAGACTGTaGGTTGCCTCTTCTAGGCTGACTCACTTCACTGAAAGAGTTCTT +
Preference number: 1 (lower is better)
Translates to: DRQEQVRKQQQKSRL*VASSRLTHFTERVL
Trigger: AAGAACTCTTTCAGTGAAGTGAGTCAGCCTAGAAGAGGCAACCCACAGTCTTGATTTTTGTTGCTGTTTCCTGACCTGTTCTTGCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR CCA 90 bp GTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTGGATTGAGACGGCGGCGTCGTaGCAGGACACCGCCACACAC +
Preference number: 2 (lower is better)
Translates to: VLRAPQLLRKAWLGDTWIETAAS*QDTATH
Trigger: GTGTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTC...AATCCAGGTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR-3UTR CCA 90 bp CCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACTCTCCACTGCTCTCCTaGCCCCTCTGGCTACTGATG +
Preference number: 2 (lower is better)
Translates to: PLSSAGSSAPQESVARGHSPLLS*PLWLLM
Trigger: CATCAGTAGCCAGAGGGGCCAGGAGAGCAGTGGAGA...GTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR-3UTR CCA 90 bp AGGTCTGGGTGGACAGACACTGCGGGAACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTaGAGACCTGGACCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: RSGWTDTAGTHSKAPFHSTRAAS*RPGPAP
Trigger: CGGGGCAGGTCCAGGTCTCCAGCTAGCTGCCCTCGT...GCTGTGGAAGGGTGCTTTACTGTGTGTTCCCGCAGTGTCTGTCCACCCAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CAA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTaGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAA +
Preference number: 2 (lower is better)
Translates to: LYIISNPYSSGAPWG*SSCWHGARFQGLAE
Trigger: TTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR CCA 90 bp CGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACAACCTGAATGCCTCTTaGGGAGGCGGCAGCACGCAG +
Preference number: 2 (lower is better)
Translates to: RRRRIPLDSQIGRGWSLNNLNAS*GGGSTQ
Trigger: CTGCGTGCTGCCGCCTCCCCAAGAGGCATTCAGGTT...GTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR TCA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCCGGACTGCAGCTGGCTaGATTACGACGACTGGGGGA +
Preference number: 2 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPRTAAG*ITTTGG
Trigger: TCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCG...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR TCA 90 bp GGAAGTAGATCTGCACCAGCCCTTCCAGTGCTCTGCGCATCCCGGTGCTGGCATTCCAGTTGTTTGCAGTaGGCTCTGCCGAGAAGGACT +
Preference number: 2 (lower is better)
Translates to: GSRSAPALPVLCASRCWHSSCLQ*ALPRRT
Trigger: AGTCCTTCTCGGCAGAGCTCACTGCAAACAACTGGA...ATGCCAGCACCGGGATGCGCAGAGCACTGGAAGGGCTGGTGCAGATCTACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR TCA 90 bp GCGGCGTCGTGGCAGGACACCGCCACACACTGTCGTAGCGCCTCTAGCCCCGCTCAATTCATCTTCTCTTaGTCCTGTGGTGAAGTCATA +
Preference number: 2 (lower is better)
Translates to: AASWQDTATHCRSASSPAQFIFS*SCGEVI
Trigger: TATGACTTCACCACAGGATCAAGAGAAGATGAATTG...AGCGGGGCTAGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR-3UTR GCA 90 bp CGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCAGCCCTGTCCGCCTTaGAGCAGCAATGACCACATG +
Preference number: 2 (lower is better)
Translates to: RRRRIPLDSQIGRGWSLNQPCPP*SSNDHM
Trigger: CATGTGGTCATTGCTGCTGCAAGGCGGACAGGGCTG...GTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CCA 90 bp AGGTCTGGGTGGACAGACACTGCGGGAACACACAGTAAAGCACCCTTCCACAGCTGCAAACTGTTAGGCTaGGGGAGCTGGGAGCCCTAC +
Preference number: 2 (lower is better)
Translates to: RSGWTDTAGTHSKAPFHSCKLLG*GSWEPY
Trigger: GTAGGGCTCCCAGCTCCCCCAGCCTAACAGTTTGCA...GCTGTGGAAGGGTGCTTTACTGTGTGTTCCCGCAGTGTCTGTCCACCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CCA 90 bp AGGTCTGGGTGGACAGACACTGCGGGAACACACAGTAAAGCACCCTTCCACAGCCAGATCGGGCGTGGGTaGAGTTTAAACCCCAGGATG +
Preference number: 2 (lower is better)
Translates to: RSGWTDTAGTHSKAPFHSQIGRG*SLNPRM
Trigger: CATCCTGGGGTTTAAACTCCACCCACGCCCGATCTG...GCTGTGGAAGGGTGCTTTACTGTGTGTTCCCGCAGTGTCTGTCCACCCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR TCA 90 bp CCTAGTCCTCTCGACAGGACCATCTCACAGGTGTTAGGAGCACCAGAGATGGGGGGATGTGTCTGGTCCTaGTACTCCTGGGATAGCATG +
Preference number: 2 (lower is better)
Translates to: PSPLDRTISQVLGAPEMGGCVWS*YSWDSM
Trigger: CATGCTATCCCAGGAGTATCAGGACCAGACACATCC...CCCCATCTCTGGTGCTCCTAACACCTGTGAGATGGTCCTGTCGAGAGGACTAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR CCA 90 bp CATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGAGGTCTGTAGGCTTTaGGACTTGGTGTCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: HHLQSIFIRSALGLVILLEVCRL*DLVSGP
Trigger: GGGGCCAGACACCAAGTCCCAAAGCCTACAGACCTC...CAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR CCA 90 bp CATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGCCAGGTTTCAGGGCCTaGCGGAAAGAGGTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: HHLQSIFIRSALGLVILLPGFRA*RKEVCR
Trigger: CCTACAGACCTCTTTCCGCCAGGCCCTGAAACCTGG...CAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR CAA 90 bp GCTAAATTTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTaGCGATGCTATCAACAGAGGGAGGATTTCCCTGCAGAACGAGCC +
Preference number: 2 (lower is better)
Translates to: AKFGRVLSTHRLPPG*RCYQQREDFPAERA
Trigger: GGCTCGTTCTGCAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAAATTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR-3UTR TCA 90 bp TGTAGCAGCATCCTCAGCCCTGTCCGCCTTGCAGCAGCAATGACCACATGCAAAAGTTCTCCAATAACCTaGATGCCTCTTGGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: CSSILSPVRLAAAMTTCKSSPIT*MPLGEA
Trigger: CGCCTCCCCAAGAGGCATTCAGGTTATTGGAGAACT...TTTGCATGTGGTCATTGCTGCTGCAAGGCGGACAGGGCTGAGGATGCTGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR TCA 90 bp CGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACTGGTGTCTGGCCCCTTaGGATGAGATTAGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: RRRRIPLDSQIGRGWSLNWCLAP*DEISSP
Trigger: TGGAGAACTAATCTCATCTCAAGGGGCCAGACACCA...GTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR CCA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCGGAAACAGAGACCCCTaGTGGCTACTGTGTGAACTG +
Preference number: 2 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPGNRDP*WLLCEL
Trigger: CAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCC...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp GTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCAGCCAGATCGGGCGTaGGTGGAGTTTAAACCCCAG +
Preference number: 2 (lower is better)
Translates to: VHHLQSIFIRSALGLVILQPDRA*VEFKPQ
Trigger: CTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTG...CAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR TCA 90 bp GTCATGTACAGGGTTGAAAGAGAAATAAGGCAGGAGCAACAGAACAGGCCCAAAGGCCTTGGGAAGACTTaGGAGCCTGTGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: VMYRVEREIRQEQQNRPKGLGKT*EPVGSG
Trigger: CCCTGACCCCACAGGCTCTCAAGTCTTCCCAAGGCC...TTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAACCCTGTACATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR TCA 90 bp ATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGAGTTCTCCAATAACCTaGATGCCTCTTGGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: IISNPYSSGAPWGLSSCWSSPIT*MPLGEA
Trigger: CGCCTCCCCAAGAGGCATTCAGGTTATTGGAGAACT...CCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR GCA 90 bp CCTAGTCCTCTCGACAGGACCATCTCACAGGTGTTAGGAGCACCAGAGATGGGGGAAAGGTTTCTCTGGTaGTGCAGGTTAGCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: PSPLDRTISQVLGAPEMGERFLW*CRLAFS
Trigger: TGAGAAGGCTAACCTGCAGCACCAGAGAAACCTTTC...CCCCATCTCTGGTGCTCCTAACACCTGTGAGATGGTCCTGTCGAGAGGACTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR GCA 90 bp ATAAAAATAAATAATCCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCCCTTCTACCCCATGCTaGTTCCTGGGGAGGCCGTGC +
Preference number: 2 (lower is better)
Translates to: IKINNPLSSAGSSAPQESPSTPC*FLGRPC
Trigger: GCACGGCCTCCCCAGGAAGCAGCATGGGGTAGAAGG...GCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGGATTATTTATTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR-3UTR CCA 90 bp TACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCCAGATCGGGCGTGGGTaGAGTTTAAACCCCAGGATG +
Preference number: 2 (lower is better)
Translates to: YIISNPYSSGAPWGLSSCQIGRG*SLNPRM
Trigger: CATCCTGGGGTTTAAACTCCACCCACGCCCGATCTG...GCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR CCA 90 bp CCTAGTAGAAGCCACACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGAGAGGTCTGTAGGCTTTaGGACTTGGTGTCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: PSRSHTQTLNLCTNTGQGEVCRL*DLVSGP
Trigger: GGGGCCAGACACCAAGTCCCAAAGCCTACAGACCTC...TCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTGTGGCTTCTACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CCA 90 bp GTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCCACAAAGGTCTGGGTaGACAGACACTGCGGGAACA +
Preference number: 2 (lower is better)
Translates to: VHHLQSIFIRSALGLVILPQRSG*TDTAGT
Trigger: TGTTCCCGCAGTGTCTGTCCACCCAGACCTTTGTGG...CAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR TCA 90 bp AGGACACCGCCACACACTGTCGTAGCGCCTCTAGCCCCGCTCAGAGCATCCAAGCTCTTGATCCTGTGGTaGAGTCATAATGCTAAATTT +
Preference number: 2 (lower is better)
Translates to: RTPPHTVVAPLAPLRASKLLILW*SHNAKF
Trigger: AAATTTAGCATTATGACTTCACCACAGGATCAAGAG...CTTGGATGCTCTGAGCGGGGCTAGAGGCGCTACGACAGTGTGTGGCGGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR-3UTR GCA 90 bp GCTTTGGTCAAAGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTGGACAGACGCTGGGAGCCCTACGTaGAGCACAGGAATGGAGATG +
Preference number: 2 (lower is better)
Translates to: ALVKVLAVRLPQRSGWTDAGSPT*STGMEM
Trigger: CATCTCCATTCCTGTGCTGCACGTAGGGCTCCCAGC...GTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACTTTGACCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CCA 90 bp GGACAGGGGGAGGAACAGACACATGATATCTCAATAAACCCACCTGGTGTAACACCAGGTTTCAGGGCCTaGCGGAAAGAGGTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: GQGEEQTHDISINPPGVTPGFRA*RKEVCR
Trigger: CCTACAGACCTCTTTCCGCCAGGCCCTGAAACCTGG...TGTTACACCAGGTGGGTTTATTGAGATATCATGTGTCTGTTCCTCCCCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CAA 90 bp CAGTGGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTaGGGAGACGGGGAGGCTAATTCCTGCAAGAACAACTTAGAACCT +
Preference number: 2 (lower is better)
Translates to: QWEGRGDTKGFILKV*GDGEANSCKNNLEP
Trigger: AGGTTCTAAGTTGTTCTTGCAGGAATTAGCCTCCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR TCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCGGACTGCAGCTGGCTaGATTACGACGACTGGGGGA +
Preference number: 2 (lower is better)
Translates to: RLVYDQERLHMPETRKTYRTAAG*ITTTGG
Trigger: TCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR TCA 90 bp CCTAGTCCTCTCGACAGGACCATCTCACAGGTGTTAGGAGCACCAGAGATGGGGTGTGGGTACCAGTTTTaGTCAGTTGGATTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: PSPLDRTISQVLGAPEMGCGYQF*SVGLKG
Trigger: TCCTTTCAATCCAACTGATCAAAACTGGTACCCACA...CCCCATCTCTGGTGCTCCTAACACCTGTGAGATGGTCCTGTCGAGAGGACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR GCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCAAGAACGGTACGGACTaGAGCTGGCTGAATTACGAC +
Preference number: 2 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCKNGTD*SWLNYD
Trigger: GTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp AGAAGGACTCTCCTCCTATCGGTTCCTAGTCCTCTCGACAGGACCATCTCACAGTTTCGATTCTGGCCTTaGGAAGACTTGAGAGCCTGT +
Preference number: 2 (lower is better)
Translates to: RRTLLLSVPSPLDRTISQFRFWP*EDLRAC
Trigger: ACAGGCTCTCAAGTCTTCCCAAGGCCAGAATCGAAA...CTGTGAGATGGTCCTGTCGAGAGGACTAGGAACCGATAGGAGGAGAGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR GCA 90 bp CCTAGTCCTCTCGACAGGACCATCTCACAGGTGTTAGGAGCACCAGAGATGGGGGGCTACTGTGTGAACTaGCACAATAACTTACAAAGA +
Preference number: 2 (lower is better)
Translates to: PSPLDRTISQVLGAPEMGGYCVN*HNNLQR
Trigger: TCTTTGTAAGTTATTGTGGCAGTTCACACAGTAGCC...CCCCATCTCTGGTGCTCCTAACACCTGTGAGATGGTCCTGTCGAGAGGACTAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR GCA 90 bp AGAAGGACTCTCCTCCTATCGGTTCCTAGTCCTCTCGACAGGACCATCTCACAGAGGTTTCTCTGGTGCTaGAGGTTAGCCTTCTCATTA +
Preference number: 2 (lower is better)
Translates to: RRTLLLSVPSPLDRTISQRFLWC*RLAFSL
Trigger: TAATGAGAAGGCTAACCTGCAGCACCAGAGAAACCT...CTGTGAGATGGTCCTGTCGAGAGGACTAGGAACCGATAGGAGGAGAGTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR CCA 90 bp GTCATGTACAGGGTTGAAAGAGAAATAAGGCAGGAGCAACAGAACAGGCCCAAAGGTACGGACTGCAGCTaGCTGAATTACGACGACTGG +
Preference number: 2 (lower is better)
Translates to: VMYRVEREIRQEQQNRPKGTDCS*LNYDDW
Trigger: CCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACC...TTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAACCCTGTACATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR CCA 90 bp AGAAGGACTCTCCTCCTATCGGTTCCTAGTCCTCTCGACAGGACCATCTCACAGCAAAAATCAAGACTGTaGGTTGCCTCTTCTAGGCTG +
Preference number: 2 (lower is better)
Translates to: RRTLLLSVPSPLDRTISQQKSRL*VASSRL
Trigger: CAGCCTAGAAGAGGCAACCCACAGTCTTGATTTTTG...CTGTGAGATGGTCCTGTCGAGAGGACTAGGAACCGATAGGAGGAGAGTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR CCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTTGGGACTTGGTGTCTaGCCCCTTGAGATGAGATTA +
Preference number: 2 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSLGLGV*PLEMRL
Trigger: TAATCTCATCTCAAGGGGCCAGACACCAAGTCCCAA...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR TCA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCTACCAGATTTCACAGTaGCCTGATAATGAAAACCTG +
Preference number: 2 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPYQISQ*PDNENL
Trigger: CAGGTTTTCATTATCAGGTCACTGTGAAATCTGGTA...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCTCATTCTCAAGGTTTTaGGAGACGGGGAGGCTAATT +
Preference number: 2 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCSFSRF*ETGRLI
Trigger: AATTAGCCTCCCCGTCTCCCAAAACCTTGAGAATGA...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATGGTACGGACTGCAGCTaGCTGAATTACGACGACTGG +
Preference number: 2 (lower is better)
Translates to: RLVYDQERLHMPETRKTYGTDCS*LNYDDW
Trigger: CCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACC...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAAGATGCCACTGAAAGCTaGATGGCAGTAGCCAACCAT +
Preference number: 2 (lower is better)
Translates to: METETPGGYCVNCHNNLQDATES*MAVANH
Trigger: ATGGTTGGCTACTGCCATCCAGCTTTCAGTGGCATC...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp TCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAAGACTATTATACTGCCACAAAGGTCTaGGTGGACAGACACTGCGGG +
Preference number: 2 (lower is better)
Translates to: SESLHEHGSRKTDIKDYYTATKV*VDRHCG
Trigger: CCCGCAGTGTCTGTCCACCCAGACCTTTGTGGCAGT...ATAATAGTCTTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR TCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCTACCAGATTTCACAGTaGCCTGATAATGAAAACCTG +
Preference number: 2 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCYQISQ*PDNENL
Trigger: CAGGTTTTCATTATCAGGTCACTGTGAAATCTGGTA...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR TCA 90 bp ACAAGCATCCTTTATTCTCCTTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACAGGGTTAGCCAATGAATaGAGAGCTCAGGACAAAGCT +
Preference number: 2 (lower is better)
Translates to: TSILYSPSSLSVQRLRLTGLANE*RAQDKA
Trigger: AGCTTTGTCCTGAGCTCTTCATTCATTGGCTAACCC...TGTTAACCGTAGCCTCTGGACACTGAGACTGGAAGGAGAATAAAGGATGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR GCA 90 bp TCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAAGACTATTATGGTGAGGCTGGGTGTTaGAAGTCATTCAGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: SESLHEHGSRKTDIKDYYGEAGC*KSFRGA
Trigger: TGCTCCCCTGAATGACTTGCAACACCCAGCCTCACC...ATAATAGTCTTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAACAGAGACCCCTGGTaGCTACTGTGTGAACTGCCA +
Preference number: 2 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFNRDPW*LLCELP
Trigger: TGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTT...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCGGAAACAGAGACCCCTaGTGGCTACTGTGTGAACTG +
Preference number: 2 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFGNRDP*WLLCEL
Trigger: CAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCC...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR CAA 90 bp AAAGAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATaGTCCCATCCCGTTATGTTTCATATGATGGAGAGATTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: KEHREKAPNPKQVTG*SHPVMFHMMERFQR
Trigger: CCTTTGAAATCTCTCCATCATATGAAACATAACGGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR TCA 90 bp CCAGAATGGCAACCCACCATCTCTCCGGAACTACAGAAAATAATAAGGCTAAAAACCAGGTTTGGAGACTaGATTGGAGCAGACAAGGGT +
Preference number: 2 (lower is better)
Translates to: PEWQPTISPELQKIIRLKTRFGD*IGADKG
Trigger: ACCCTTGTCTGCTCCAATTCAGTCTCCAAACCTGGT...TTTTAGCCTTATTATTTTCTGTAGTTCCGGAGAGATGGTGGGTTGCCATTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR GCA 90 bp AAACAGTACAAAACCAGGTTGCATAAAGTGACCAAAGCTTTGGTCAAAGTTTTATGGGGCTTGTCATCCTaGTGGCACGGGGCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: KQYKTRLHKVTKALVKVLWGLSS*WHGARF
Trigger: AAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCA...TAAAACTTTGACCAAAGCTTTGGTCACTTTATGCAACCTGGTTTTGTACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR TCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAAAGAGACTGGTCTATaGCCAGGAGAGGCTACACAT +
Preference number: 2 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFKETGL*PGEATH
Trigger: ATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCTTT...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR TCA 90 bp TCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAAGACTATTATTGGTGTCTGGCCCCTTaGGATGAGATTAGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: SESLHEHGSRKTDIKDYYWCLAP*DEISSP
Trigger: TGGAGAACTAATCTCATCTCAAGGGGCCAGACACCA...ATAATAGTCTTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CCA 90 bp TTCAGCTTTAACTCAAGTTGCTGTCTGAGACCCATGAGCCTGGCTGTGGATGTGGTCTTAAATGGAAAATaGTCCATCAGAGACAAAGGT +
Preference number: 2 (lower is better)
Translates to: FSFNSSCCLRPMSLAVDVVLNGK*SIRDKG
Trigger: ACCTTTGTCTCTGATGGACCATTTTCCATTTAAGAC...CACATCCACAGCCAGGCTCATGGGTCTCAGACAGCAACTTGAGTTAAAGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR CAA 90 bp TCTGAGAAACAGTACAAAACCAGGTTGCATAAAGTGACCAAAGCTTaGGTCAAAGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: SEKQYKTRLHKVTKA*VKVLAVRLPQRSGW
Trigger: CCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACTTTGACCAAAGCTTTGGTCACTTTATGCAACCTGGTTTTGTACTGTTTCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR TCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCACAGAACAAAGTTTGTaGTGGAAACAGAGACCCCTG +
Preference number: 2 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFTEQSL*WKQRPL
Trigger: CAGGGGTCTCTGTTTCCATCACAAACTTTGTTCTGT...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR GCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGAGGGGAGGCTAATTCCTaGAAGAACAACTTAGAACCT +
Preference number: 2 (lower is better)
Translates to: EARANTNDQFTSMERTQRGEANS*KNNLEP
Trigger: AGGTTCTAAGTTGTTCTTGCAGGAATTAGCCTCCCC...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGATCATTCTCAAGGTTTTaGGAGACGGGGAGGCTAATT +
Preference number: 2 (lower is better)
Translates to: EARANTNDQFTSMERTQRSFSRF*ETGRLI
Trigger: AATTAGCCTCCCCGTCTCCCAAAACCTTGAGAATGA...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCGTCAAGGCATCACCGTaGTCTGAGGGGACTGAGACT +
Preference number: 2 (lower is better)
Translates to: MKTGLYMILYNQFPKQDAVKASP*SEGTET
Trigger: AGTCTCAGTCCCCTCAGACCACGGTGATGCCTTGAC...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR CAA 90 bp GTTGAAAGAGAAATAAGGCAGGAGCAACAGAACAGGCCCAAAGTGTaGCCATTAAGAAAGCTTTGCTTTTACTTTCTTAGAGGGGAGTGT +
Preference number: 2 (lower is better)
Translates to: VEREIRQEQQNRPKV*PLRKLCFYFLRGEC
Trigger: ACACTCCCCTCTAAGAAAGTAAAAGCAAAGCTTTCTTAATGGCAACACTTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR GCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCGGGGAGGCTAATTCCTaGAAGAACAACTTAGAACCT +
Preference number: 2 (lower is better)
Translates to: MKTGLYMILYNQFPKQDAGEANS*KNNLEP
Trigger: AGGTTCTAAGTTGTTCTTGCAGGAATTAGCCTCCCC...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR GCA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTGGCTACTGTGTGAACTaGCACAATAACTTACAAAGA +
Preference number: 2 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTGYCVN*HNNLQR
Trigger: TCTTTGTAAGTTATTGTGGCAGTTCACACAGTAGCC...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR CCA 72 bp GCACCAGCCCTTCCAGTGCTCTGCGCATCCCGGTGCTaGCATCACCGCTCCTCATCTCCTTGGGGAGAAGCC +
Preference number: 3 (lower is better)
Translates to: APALPVLCASRC*HHRSSSPWGEA
Trigger: GGCTTCTCCCCAAGGAGATGAGGAGCGGTGATGCCAGCACCGGGATGCGCAGAGCACTGGAAGGGCTGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR CCA 72 bp GTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTaGCAGGACACCGCCACACACTGTCGTAGCGCCTCT +
Preference number: 3 (lower is better)
Translates to: VNCVVALETAAS*QDTATHCRSAS
Trigger: AGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGAC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR CCA 72 bp GCTGCTTCCTGGGGAGGCCGTGCTGGGGCGGCCTCCTaGAGAAGGAGGCGGCAAGTCCAGGTTGTGGTTTAT +
Preference number: 3 (lower is better)
Translates to: AASWGGRAGAAS*RRRRQVQVVVY
Trigger: ATAAACCACAACCTGGACTTGCCGCCTCCTTCTCCAGGAGGCCGCCCCAGCACGGCCTCCCCAGGAAGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR GCA 72 bp CCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTaGTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAA +
Preference number: 3 (lower is better)
Translates to: PYSSGAPWGLSS*WHGARFQGLAE
Trigger: TTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR CAA 90 bp CGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGGGAGCGCCCTGGGGCTaGTCATCCTGCTGGCACGGG +
Preference number: 3 (lower is better)
Translates to: RRIPLDSQIGRGWSLNPRGAPWG*SSCWHG
Trigger: CCCGTGCCAGCAGGATGACAAGCCCCAGGGCGCTCC...CCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR-3UTR CAA 90 bp TCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCACACCTGTCCACGCACAGATaGCCACCAGGTTTGCGATGC +
Preference number: 3 (lower is better)
Translates to: STVWWLWRRRRRGRTPPHLSTHR*PPGLRC
Trigger: GCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAG...GTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR GCA 72 bp TCTGCACCAGCCCTTCCAGTGCTCTGCGCATCCCGGTaGTGGCATCACCGCTCCTCATCTCCTTGGGGAGAA +
Preference number: 3 (lower is better)
Translates to: SAPALPVLCASR*WHHRSSSPWGE
Trigger: TTCTCCCCAAGGAGATGAGGAGCGGTGATGCCAGCACCGGGATGCGCAGAGCACTGGAAGGGCTGGTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR CCA 72 bp TATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTaGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGA +
Preference number: 3 (lower is better)
Translates to: YSSGAPWGLSSC*HGARFQGLAER
Trigger: TCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR GCA 72 bp CTCAGCCCTGTCCGCCTTGCAGCAGCAATGACCACATaGAAACTGTTAGGCTGGGGGAGCTGGGAGCCCTAC +
Preference number: 3 (lower is better)
Translates to: LSPVRLAAAMTT*KLLGWGSWEPY
Trigger: GTAGGGCTCCCAGCTCCCCCAGCCTAACAGTTTGCATGTGGTCATTGCTGCTGCAAGGCGGACAGGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CCA 72 bp AGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTaGAGACCTGGACCTGCCCCGAGGCTTGTAGCAGCA +
Preference number: 3 (lower is better)
Translates to: SKAPFHSTRAAS*RPGPAPRLVAA
Trigger: TGCTGCTACAAGCCTCGGGGCAGGTCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR GCA 72 bp ATGGGAAGTAGATCTGCACCAGCCCTTCCAGTGCTCTaGGCATCCCGGTGCTGGCATCACCGCTCCTCATCT +
Preference number: 3 (lower is better)
Translates to: MGSRSAPALPVL*ASRCWHHRSSS
Trigger: AGATGAGGAGCGGTGATGCCAGCACCGGGATGCGCAGAGCACTGGAAGGGCTGGTGCAGATCTACTTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR CCA 72 bp CCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTaGATTCGAGGCATCTGCCTTCTACCCCATGCTGCT +
Preference number: 3 (lower is better)
Translates to: PQLLRKAWLGDT*IRGICLLPHAA
Trigger: AGCAGCATGGGGTAGAAGGCAGATGCCTCGAATCCAGGTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR TCA 72 bp GAAGGAGGCGGCAAGTCCAGGTTGTGGTTTATCGGCTaGGGTCCTGAGCACTGCCGGGTAAGGACAGTCAAC +
Preference number: 3 (lower is better)
Translates to: EGGGKSRLWFIG*GPEHCRVRTVN
Trigger: GTTGACTGTCCTTACCCGGCAGTGCTCAGGACCTCAGCCGATAAACCACAACCTGGACTTGCCGCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR GCA 72 bp AGGTTTGCGATGCTATCAACAGAGGGAGGATTTCCCTaGAGAACGAGCCGGGAAGAGGCTGGGAGGGTGCAG +
Preference number: 3 (lower is better)
Translates to: RFAMLSTEGGFP*RTSREEAGRVQ
Trigger: CTGCACCCTCCCAGCCTCTTCCCGGCTCGTTCTGCAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR TCA 72 bp CACAATGAAAGCTGGGGGTCAGAGGTAAGAGCCTGCTaGGCAGGAGTGGGGATCTGCAAAGGGACTAAGGGG +
Preference number: 3 (lower is better)
Translates to: HNESWGSEVRAC*AGVGICKGTKG
Trigger: CCCCTTAGTCCCTTTGCAGATCCCCACTCCTGCTCAGCAGGCTCTTACCTCTGACCCCCAGCTTTCATTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR TCA 72 bp CGGCAAGTCCAGGTTGTGGTTTATCGGCTGAGGTCCTaGGCACTGCCGGGTAAGGACAGTCAACTGTGTGGT +
Preference number: 3 (lower is better)
Translates to: RQVQVVVYRLRS*ALPGKDSQLCG
Trigger: ACCACACAGTTGACTGTCCTTACCCGGCAGTGCTCAGGACCTCAGCCGATAAACCACAACCTGGACTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR GCA 72 bp GGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTaGGATGCTATCAACAGAGGGAGGATTTCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: GGSCPRTDCHQV*DAINRGRISLQ
Trigger: CTGCAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR CCA 72 bp CTTGCAGCAGCAATGACCACATGCAAACTGTTAGGCTaGGGGAGCTGGGAGCCCTACGTGCAGCACAGGAAT +
Preference number: 3 (lower is better)
Translates to: LAAAMTTCKLLG*GSWEPYVQHRN
Trigger: ATTCCTGTGCTGCACGTAGGGCTCCCAGCTCCCCCAGCCTAACAGTTTGCATGTGGTCATTGCTGCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR TCA 72 bp GTCAAGGCATCACCGTGGTCTGAGGGGACTGAGACTTaGGCCCATGTCCTCAGGACTGCCTTACCAGATTTC +
Preference number: 3 (lower is better)
Translates to: VKASPWSEGTET*AHVLRTALPDF
Trigger: GAAATCTGGTAAGGCAGTCCTGAGGACATGGGCTCAAGTCTCAGTCCCCTCAGACCACGGTGATGCCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR CCA 72 bp TACATCATCTCCAATCCATATTCATCAGGAGCGCCCTaGGGCTTGTCATCCTGCTGGCACGGGGCCAGGTTT +
Preference number: 3 (lower is better)
Translates to: YIISNPYSSGAP*GLSSCWHGARF
Trigger: AAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR GCA 72 bp GTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATaGTATCAACAGAGGGAGGATTTCCCTGCAGAACGA +
Preference number: 3 (lower is better)
Translates to: VLSTHRLPPGLR*YQQREDFPAER
Trigger: TCGTTCTGCAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR CCA 72 bp CGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTaGAGTTTAAACCCCAGGATGTTGCTAACAGCCACA +
Preference number: 3 (lower is better)
Translates to: RRIPLDSQIGRG*SLNPRMLLTAT
Trigger: TGTGGCTGTTAGCAACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CCA 72 bp GAAGAGCTCAGGACAAAGCTTTCCTTAGGGACATCGTaGCCTCCTTTCCTCCACAGGAGTGAATGCAGGACA +
Preference number: 3 (lower is better)
Translates to: EELRTKLSLGTS*PPFLHRSECRT
Trigger: TGTCCTGCATTCACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAGCTTTGTCCTGAGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CAA 90 bp GCTTTGGTCAAAGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTGGACAGACTGTAGGCTTTGGGACTaGGTGTCTGGCCCCTTGAGA +
Preference number: 3 (lower is better)
Translates to: ALVKVLAVRLPQRSGWTDCRLWD*VSGPLR
Trigger: TCTCAAGGGGCCAGACACCAAGTCCCAAAGCCTACA...GTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACTTTGACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CCA 72 bp GGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTaGGAGACGGGGAGGCTAATTCCTGCAAGAACAACT +
Preference number: 3 (lower is better)
Translates to: GEAIPRASFSRF*ETGRLIPARTT
Trigger: AGTTGTTCTTGCAGGAATTAGCCTCCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR CCA 72 bp AAAGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTaGACAGACACTGCGGGAACACACAGTAAAGCACCC +
Preference number: 3 (lower is better)
Translates to: KVLAVRLPQRSG*TDTAGTHSKAP
Trigger: GGGTGCTTTACTGTGTGTTCCCGCAGTGTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CAA 90 bp TTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACAGGTTTTCAAAGTGCAAATCATGTAGGCTTTGGGACTaGGTGTCTGGCCCCTTGAGA +
Preference number: 3 (lower is better)
Translates to: FQSQCPEATVNRFSKCKSCRLWD*VSGPLR
Trigger: TCTCAAGGGGCCAGACACCAAGTCCCAAAGCCTACA...TGATTTGCACTTTGAAAACCTGTTAACCGTAGCCTCTGGACACTGAGACTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR TCA 72 bp ATCAAGGGGATGGTGAACACGAGTCATGTACAGGGTTaGAAGAGAAATAAGGCAGGAGCAACAGAACAGGCC +
Preference number: 3 (lower is better)
Translates to: IKGMVNTSHVQG*KRNKAGATEQA
Trigger: GGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAACCCTGTACATGACTCGTGTTCACCATCCCCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR GCA 72 bp CAGAGAAGAAGGATGAGTTTCAGCTTTAACTCAAGTTaGTGTCTGAGACCCATGAGCCTGGCTGTGGATGTG +
Preference number: 3 (lower is better)
Translates to: QRRRMSFSFNSS*CLRPMSLAVDV
Trigger: CACATCCACAGCCAGGCTCATGGGTCTCAGACAGCAACTTGAGTTAAAGCTGAAACTCATCCTTCTTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR GCA 72 bp CTGACTCACTTCACTGAAAGAGTTCTTCAGTTCTCCTaGCTAGCACTTGGAAAGGTTTCTCTGGTGCTGCAG +
Preference number: 3 (lower is better)
Translates to: LTHFTERVLQFS*LALGKVSLVLQ
Trigger: CTGCAGCACCAGAGAAACCTTTCCAAGTGCTAGGCAGGAGAACTGAAGAACTCTTTCAGTGAAGTGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR GCA 72 bp CAGCCTAGTAGAAGCCACACACAGACTCTGAATCTTTaGACGAACACGGGTCAAGGAAGACAGACATCAAAG +
Preference number: 3 (lower is better)
Translates to: QPSRSHTQTLNL*TNTGQGRQTSK
Trigger: CTTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTGTGGCTTCTACTAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR-3UTR CAA 90 bp TTCCTACCAGAATGGCAACCCACCATCTCTCCGGAACTACAGAAAATAATAAGGCTTTCGATTCTGGCCTaGGGAAGACTTGAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: FLPEWQPTISPELQKIIRLSILA*GRLESL
Trigger: CAGGCTCTCAAGTCTTCCCAAGGCCAGAATCGAAAG...CCTTATTATTTTCTGTAGTTCCGGAGAGATGGTGGGTTGCCATTCTGGTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR TCA 72 bp TGTAACATCAGCCTAGTAGAAGCCACACACAGACTCTaGATCTTTGCACGAACACGGGTCAAGGAAGACAGA +
Preference number: 3 (lower is better)
Translates to: CNISLVEATHRL*IFARTRVKEDR
Trigger: TCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTGTGGCTTCTACTAGGCTGATGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR GCA 72 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTaGCACAATAACTTACAAAGAGACTGGTCTATGACC +
Preference number: 3 (lower is better)
Translates to: METETPGGYCVN*HNNLQRDWSMT
Trigger: GGTCATAGACCAGTCTCTTTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR TCA 72 bp TCTAGGGGATGGAGGAGAGGCAAGAGCAAACACCAATaGCCAATTCACATCAATGGAAAGAACACAGAGAGA +
Preference number: 3 (lower is better)
Translates to: SRGWRRGKSKHQ*PIHINGKNTER
Trigger: TCTCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTCTCCTCCATCCCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR TCA 72 bp TTCTCCCCCACAATTCATCTTCTCTTGATCCTGTGGTaGAGTCATAATGCTAAATTTGGGAGGGTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: FSPTIHLLLILW*SHNAKFGRVLS
Trigger: GGACAGGACCCTCCCAAATTTAGCATTATGACTTCACCACAGGATCAAGAGAAGATGAATTGTGGGGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605610.5
3UTR CCA 72 bp TACTGTGTGAACTGCCACAATAACTTACAAAGAGACTaGTCTATGACCAGGAGAGGCTACACATGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: YCVNCHNNLQRD*SMTRRGYTCQR
Trigger: TCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCTTTGTAAGTTATTGTGGCAGTTCACACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR CCA 72 bp GAACAGGTCAGGAAACAGCAACAAAAATCAAGACTGTaGGTTGCCTCTTCTAGGCTGACTCACTTCACTGAA +
Preference number: 3 (lower is better)
Translates to: EQVRKQQQKSRL*VASSRLTHFTE
Trigger: TTCAGTGAAGTGAGTCAGCCTAGAAGAGGCAACCCACAGTCTTGATTTTTGTTGCTGTTTCCTGACCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR CAA 90 bp TTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACAGGTTTTCAAAGTGCAAATCATTAAACCCCAGGATGTaGCTAACAGCCACAATGAAA +
Preference number: 3 (lower is better)
Translates to: FQSQCPEATVNRFSKCKSLNPRM*LTATMK
Trigger: TTTCATTGTGGCTGTTAGCAACATCCTGGGGTTTAA...TGATTTGCACTTTGAAAACCTGTTAACCGTAGCCTCTGGACACTGAGACTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR TCA 72 bp AACAAAAATCAAGACTGTGGGTTGCCTCTTCTAGGCTaGCTCACTTCACTGAAAGAGTTCTTCAGTTCTCCT +
Preference number: 3 (lower is better)
Translates to: NKNQDCGLPLLG*LTSLKEFFSSP
Trigger: AGGAGAACTGAAGAACTCTTTCAGTGAAGTGAGTCAGCCTAGAAGAGGCAACCCACAGTCTTGATTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573034.7
3UTR-3UTR CAA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGAGTCCCTATAGTCCCCTaGTCTAGAACAATTAAATTA +
Preference number: 3 (lower is better)
Translates to: EARANTNDQFTSMERTQRVPIVP*SRTIKL
Trigger: TAATTTAATTGTTCTAGACAAGGGGACTATAGGGAC...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
3UTR-3UTR CAA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCGTCCCTATAGTCCCCTaGTCTAGAACAATTAAATTA +
Preference number: 3 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFVPIVP*SRTIKL
Trigger: TAATTTAATTGTTCTAGACAAGGGGACTATAGGGAC...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
CDS-3UTR GCA 90 bp GTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCACATTCCTGGGGAGGCCGTaGTGGGGCGGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VNCVVALETAASWQDTATFLGRP*WGGLLE
Trigger: CTCCAGGAGGCCGCCCCAGCACGGCCTCCCCAGGAA...TGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTGGGGAGGCCGTGCTaGGGCGGCCTCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PLSSAGSSAPQESVARGHLGRPC*GGLLEK
Trigger: CTTCTCCAGGAGGCCGCCCCAGCACGGCCTCCCCAG...GTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp GCGGCGTCGTGGCAGGACACCGCCACACACTGTCGTAGCGCCTCTAGCCCCGCTTATCGGCTGAGGTCCTaGGCACTGCCGGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: AASWQDTATHCRSASSPAYRLRS*ALPGKD
Trigger: GTCCTTACCCGGCAGTGCTCAGGACCTCAGCCGATA...AGCGGGGCTAGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp TGGAGACGGCGGCGTCGTGGCAGGACACCGCCACACACTGTCGTAGCGCCTCTACCTTCTACCCCATGCTaGTTCCTGGGGAGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: WRRRRRGRTPPHTVVAPLPSTPC*FLGRPC
Trigger: GCACGGCCTCCCCAGGAAGCAGCATGGGGTAGAAGG...TAGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GCTTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCCTACATGACCCCCACTaGGACAGCTGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ACHPAGTGPGFRAWRKEVLHDPH*DSWPPL
Trigger: GAGCGGGGGCCAGCTGTCCCAGTGGGGGTCATGTAG...GACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR GCA 90 bp GGGAGGATTTCCCTGCAGAACGAGCCGGGAAGAGGCTGGGAGGGTGCAGACTCACCCAGGTCTCTCCACTaGTCTCCTGGCCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRISLQNEPGRGWEGADSPRSLH*SPGPSG
Trigger: GCCAGAGGGGCCAGGAGAGCAGTGGAGAGACCTGGG...TGAGTCTGCACCCTCCCAGCCTCTTCCCGGCTCGTTCTGCAGGGAAATCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GCGGCGTCGTGGCAGGACACCGCCACACACTGTCGTAGCGCCTCTAGCCCCGCTCAGCTCCCTGGGGCTTaGGAAGATGTTCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: AASWQDTATHCRSASSPAQLPGA*EDVLML
Trigger: CAGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTG...AGCGGGGCTAGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGCTGGAGGGCTCTGACGTaGGGGCCACCACTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ERYGLQLAELRRLGEAEGWRALT*GPPLGR
Trigger: CCTCCCCAGTGGTGGCCCCCACGTCAGAGCCCTCCA...GCCCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp ACAGTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCCAGTCAACTGTGTGGTaGCTCTGGAGACGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: TVNCVVALETAASWQDTAQSTVW*LWRRRR
Trigger: ACGCCGCCGTCTCCAGAGCCACCACACAGTTGACTG...GGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp GCGGCAGCACGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGTCATCGCTCGTGTGGTaGTCTGCGGTCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: AAARRRRIPLDSQIGRGWSSLVW*SAVTSW
Trigger: CCAGGATGTGACCGCAGAGCACCACACGAGCGATGA...CCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCGTGCTGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CTGGAGACGGCGGCGTCGTGGCAGGACACCGCCACACACTGTCGTAGCGCCTCTCAGTTGAGCTGCGCCTaGCTAGACTGCAATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LETAASWQDTATHCRSASQLSCA*LDCNLS
Trigger: GGACAGATTGCAGTCTAGCCAGGCGCAGCTCAACTG...AGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GGGGAGGCGGCAGCACGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTAGCTGGCCCCCGCTCTaGCTGTCACCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GEAAARRRRIPLDSQIGRSWPPL*LSPFLQ
Trigger: CTGAAGAAAAGGTGACAGCCAGAGCGGGGGCCAGCT...ACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCGTGCTGCCGCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp TGGAGACGGCGGCGTCGTGGCAGGACACCGCCACACACTGTCGTAGCGCCTCTATCTCCACTGCTCTCCTaGCCCCTCTGGCTACTGATG +
Preference number: 4 (lower is better)
Translates to: WRRRRRGRTPPHTVVAPLSPLLS*PLWLLM
Trigger: CATCAGTAGCCAGAGGGGCCAGGAGAGCAGTGGAGA...TAGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CACTGTCGTAGCGCCTCTAGCCCCGCTCAGAGCATCCAAGCCGGTCCCAGGTCTGGACAGTCAACTGTGTaGTGGCTCTGGAGACGGCGG +
Preference number: 4 (lower is better)
Translates to: HCRSASSPAQSIQAGPRSGQSTV*WLWRRR
Trigger: CCGCCGTCTCCAGAGCCACCACACAGTTGACTGTCC...AGACCTGGGACCGGCTTGGATGCTCTGAGCGGGGCTAGAGGCGCTACGACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCACAATCAGCTCATTCACGTaGGCTTGGCAGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: VNCVVALETAASWQDTATISSFT*AWQDTW
Trigger: CCAGGTGTCCTGCCAAGCCCACGTGAATGAGCTGAT...TGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp ACAGTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCTGGCAATGGCCTCGATaGGCTCACATTCGTCATCGC +
Preference number: 4 (lower is better)
Translates to: TVNCVVALETAASWQDTAWQWPR*AHIRHR
Trigger: GCGATGACGAATGTGAGCCCATCGAGGCCATTGCCA...GGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGACTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GGGGAGGCGGCAGCACGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTCCTCAATCTCAGACTTaGGGCTGGACCTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: GEAAARRRRIPLDSQIGRPQSQT*GWTSPR
Trigger: TCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGG...ACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCGTGCTGCCGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp ACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTGGAGACCTGGACCCCACTGGGACAGCTaGCCCCCGCTCTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: THSKAPFHSTRAASWRPGPHWDS*PPLWLS
Trigger: TGACAGCCAGAGCGGGGGCCAGCTGTCCCAGTGGGG...TCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp CTAGGGGACACCTGGATTCGAGGCATCTGCCTTCTACCCCATGCTGCTTCCTGGACTGTGTGGTGGCTCTaGAGACGGCGGCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: LGDTWIRGICLLPHAASWTVWWL*RRRRRG
Trigger: GCCACGACGCCGCCGTCTCCAGAGCCACCACACAGT...CCAGGAAGCAGCATGGGGTAGAAGGCAGATGCCTCGAATCCAGGTGTCCCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp ACAGTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCCACCACCAGAGGAATTaGCTGGCTGGAGTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: TVNCVVALETAASWQDTAHHQRN*LAGVLF
Trigger: AAACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTG...GGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp GTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCACATGCAGAGCTCTCTCCTaGAGGTTGTCCATTGTGACG +
Preference number: 4 (lower is better)
Translates to: VNCVVALETAASWQDTATCRALS*RLSIVT
Trigger: CGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCA...TGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp GCTTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCAGGACTTTCCGGATGTaGAGAGCTCTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ACHPAGTGPGFRAWRKEVRTFRM*RALSCR
Trigger: CCTGCAGGAGAGAGCTCTGCACATCCGGAAAGTCCT...GACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCCAGCAGTACTGGCGCTaGGCTGGAAGGCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPQQYWR*AGRRAR
Trigger: CCGAGCCCGCCTTCCAGCGCAGCGCCAGTACTGCTG...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GCTTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCATCAGCTCATTCACGTaGGCTTGGCAGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: ACHPAGTGPGFRAWRKEVISSFT*AWQDTW
Trigger: CCAGGTGTCCTGCCAAGCCCACGTGAATGAGCTGAT...GACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp AGGACACCGCCACACACTGTCGTAGCGCCTCTAGCCCCGCTCAGAGCATCCAAGTCGTCATCGCTCGTGTaGTGCTCTGCGGTCACATCC +
Preference number: 4 (lower is better)
Translates to: RTPPHTVVAPLAPLRASKSSSLV*CSAVTS
Trigger: GGATGTGACCGCAGAGCACCACACGAGCGATGACGA...CTTGGATGCTCTGAGCGGGGCTAGAGGCGCTACGACAGTGTGTGGCGGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GCTTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCTGGCAATGGCCTCGATaGGCTCACATTCGTCATCGC +
Preference number: 4 (lower is better)
Translates to: ACHPAGTGPGFRAWRKEVWQWPR*AHIRHR
Trigger: GCGATGACGAATGTGAGCCCATCGAGGCCATTGCCA...GACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp TTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACGAGACGGCGGCGTCGTaGCAGGACACCGCCACACAC +
Preference number: 4 (lower is better)
Translates to: LGGSCPRTDCHQVCDAINETAAS*QDTATH
Trigger: GTGTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTC...GTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCTGTAGGCTTTGGGCAGATCGGGCGTGGGTaGAGTTTAAACCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LARGQVSGPGGKRSVGFGQIGRG*SLNPRM
Trigger: CATCCTGGGGTTTAAACTCCACCCACGCCCGATCTG...CCCAAAGCCTACAGACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp TTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCTGGAGGTCTGTAGGCTTTaGGACTTGGTGTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSSCWHGARFQGLAERGLEVCRL*DLVSGP
Trigger: GGGGCCAGACACCAAGTCCCAAAGCCTACAGACCTC...CAGACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp TTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCTGCCAGGTTTCAGGGCCTaGCGGAAAGAGGTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LSSCWHGARFQGLAERGLPGFRA*RKEVCR
Trigger: CCTACAGACCTCTTTCCGCCAGGCCCTGAAACCTGG...CAGACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp CTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCTGTAGGCTTTGGGGGTCACATCCTGGGTTaGGTCTTCAACCGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LARGQVSGPGGKRSVGFGGHILG*VFNRGS
Trigger: ACTACCTCGGTTGAAGACTCAACCCAGGATGTGACC...CCCAAAGCCTACAGACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR GCA 90 bp GAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGCTCATCGCTCGTGTGGTaGTCTGCGGTCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: ERYGLQLAELRRLGEAEGSSLVW*SAVTSW
Trigger: CCAGGATGTGACCGCAGAGCACCACACGAGCGATGA...GCCCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACGAGGAATTGCCTGGCTaGAGTCCTGTTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PLSSAGSSAPQESVARGHEELPG*SPVSSQ
Trigger: CTGTGAGGAAACAGGACTCCAGCCAGGCAATTCCTC...GTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACATGGAATCCATGTCATaGTCGTTCTGGTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLSSAGSSAPQESVARGHMESMS*SFWSPA
Trigger: GGCTGGGGACCAGAACGACCATGACATGGATTCCAT...GTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTGGATTCAGGACACCTGGTCGTaGCCCTCTGGCACTGACATT +
Preference number: 4 (lower is better)
Translates to: VLRAPQLLRKAWLGDTWIQDTWS*PSGTDI
Trigger: AATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTG...AATCCAGGTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTGGATTTCATTCACGTGGGCTTaGCAGGACACCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: VLRAPQLLRKAWLGDTWISFTWA*QDTWSW
Trigger: CCACGACCAGGTGTCCTGCCAAGCCCACGTGAATGA...AATCCAGGTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGCCCCACTGGGACAGCTaGCCCCCGCTCTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HHLQSIFIRSALGLVILLPHWDS*PPLWLS
Trigger: TGACAGCCAGAGCGGGGGCCAGCTGTCCCAGTGGGG...CAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGGGTCCTTGAGGAGCTaGGTGTGCAGAGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQRGSLRS*VCRGLE
Trigger: CTCCAGCCCTCTGCACACCCAGCTCCTCAAGGACCC...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGCTTTTGGGGAAGACAGTaGGCTTGGGCCGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ERYGLQLAELRRLGEAEGFWGRQ*AWAVWL
Trigger: CAGCCACACGGCCCAAGCCCACTGTCTTCCCCAAAA...GCCCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGAGGATTTCCCTGGCTGGGGCGGCCTCCTaGAGAAGGAGGCGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RTDCHQVCDAINRGRISLAGAAS*RRRRQV
Trigger: GACTTGCCGCCTCCTTCTCCAGGAGGCCGCCCCAGC...CAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp AGGACACCGCCACACACTGTCGTAGCGCCTCTAGCCCCGCTCAGAGCATCCAAGTGGCTAGGGGACACCTaGATTCGAGGCATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RTPPHTVVAPLAPLRASKWLGDT*IRGICL
Trigger: AAGGCAGATGCCTCGAATCCAGGTGTCCCCTAGCCA...CTTGGATGCTCTGAGCGGGGCTAGAGGCGCTACGACAGTGTGTGGCGGTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp TCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGCACGAGGGCAGCTAGCTaGAGACCTGGACCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SSPIHIHQERPGACHPAGTRAAS*RPGPAP
Trigger: CGGGGCAGGTCCAGGTCTCCAGCTAGCTGCCCTCGT...GCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CAA 72 bp ATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTaGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ISNPYSSGAPWG*SSCWHGARFQG
Trigger: GCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp GCGGCAGCACGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGCTAGGGGTTAGCCAATaGATGAAGAGCTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: AAARRRRIPLDSQIGRGWLGVSQ*MKSSGQ
Trigger: TTGTCCTGAGCTCTTCATTCATTGGCTAACCCCTAG...CCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCGTGCTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp ACAGTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCCGGAAAATTCCTTCATaGTGTAGTCCGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVNCVVALETAASWQDTARKIPS*CSPCLL
Trigger: CAGCAGACACGGACTACAGCATGAAGGAATTTTCCG...GGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp AGGACACCGCCACACACTGTCGTAGCGCCTCTAGCCCCGCTCAGAGCATCCAAGAAGAGGCTGGGAGGGTaGAGACTCACTCAGGATATC +
Preference number: 4 (lower is better)
Translates to: RTPPHTVVAPLAPLRASKKRLGG*RLTQDI
Trigger: GATATCCTGAGTGAGTCTGCACCCTCCCAGCCTCTT...CTTGGATGCTCTGAGCGGGGCTAGAGGCGCTACGACAGTGTGTGGCGGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp ACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTGGAGACCTGGAATGTCATGGTCGTTCTaGTCCCCAGCCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: THSKAPFHSTRAASWRPGMSWSF*SPARGS
Trigger: GGACCCCCTGGCTGGGGACCAGAACGACCATGACAT...TCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp GTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCACACATGAAAGATGTCCTTaGGGAAGAGAGGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VNCVVALETAASWQDTATHERCP*GREGVP
Trigger: TGGAACACCCTCTCTTCCCCAAGGACATCTTTCATG...TGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp TTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCTGTCTGCGGTCACATCCTaGGTTGAGTCTTCAACCGAG +
Preference number: 4 (lower is better)
Translates to: LSSCWHGARFQGLAERGLSAVTS*VESSTE
Trigger: CTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGA...CAGACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CAGGATGTTGCTAACAGCCACAATGAAAGCTGGGGGTCAGAGGTAAGAGCCTGCCTACATGACCCCCACTaGGACAGCTGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: QDVANSHNESWGSEVRACLHDPH*DSWPPL
Trigger: GAGCGGGGGCCAGCTGTCCCAGTGGGGGTCATGTAG...GCAGGCTCTTACCTCTGACCCCCAGCTTTCATTGTGGCTGTTAGCAACATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp GACACTGCGGGAACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCACTGCCACAAAGGTCTaGGTGGACAGACACTGCGGG +
Preference number: 4 (lower is better)
Translates to: DTAGTHSKAPFHSTRAASTATKV*VDRHCG
Trigger: CCCGCAGTGTCTGTCCACCCAGACCTTTGTGGCAGT...GCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGTTCCCGCAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp CTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTGGAGCACGGATCTCTTTaGCCTGAGTATCGTACTCTG +
Preference number: 4 (lower is better)
Translates to: LSSAGSSAPQESVARGHLEHGSL*PEYRTL
Trigger: CAGAGTACGATACTCAGGTCAAAGAGATCCGTGCTC...CAGGTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp AGGACAGTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCCATTCTGATCCTTCTTaGATTGCTGGTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RTVNCVVALETAASWQDTHSDPS*IAGPWC
Trigger: GCACCAAGGACCAGCAATTCAAGAAGGATCAGAATG...GGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGACTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp AGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTGGATCAGGCCATCAGGTCATaGAAGATGTCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSAGSSAPQESVARGHLDQAIRS*KMSLGK
Trigger: CTTCCCCAAGGACATCTTTCATGACCTGATGGCCTG...ATCCAGGTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp GGGGAGGCGGCAGCACGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTTTCTGCAGAAGGTCATaGTTGGCTTGTAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: GEAAARRRRIPLDSQIGRFCRRS*LACNLV
Trigger: CACCAAGTTACAAGCCAAGCATGACCTTCTGCAGAA...ACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCGTGCTGCCGCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp ACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTGGAGACCTGGAGCTGGGAGCCCTACGTaGAGCACAGGAATGGAGATG +
Preference number: 4 (lower is better)
Translates to: THSKAPFHSTRAASWRPGAGSPT*STGMEM
Trigger: CATCTCCATTCCTGTGCTGCACGTAGGGCTCCCAGC...TCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp ATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGATGTTGTGGGGCTTGTCATCCTaGTGGCACGGGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: IPLDSQIGRGWSLNPRMLWGLSS*WHGARF
Trigger: AAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCA...CAACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGCAGGACACCTGGTCGTaGCCCTCTGGCACTGACATT +
Preference number: 4 (lower is better)
Translates to: RRIPLDSQIGRGWSLNPRQDTWS*PSGTDI
Trigger: AATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTG...CCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGAGGATTTCCCTGGCTTGGCAGGACACCTaGTCGTGGCCCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: RTDCHQVCDAINRGRISLAWQDT*SWPSGT
Trigger: AGTGCCAGAGGGCCACGACCAGGTGTCCTGCCAAGC...CAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp AGGTCTGGGTGGACAGACACTGCGGGAACACACAGTAAAGCACCCTTCCACAGCCAGCCAGATCGGGCGTaGGTGGAGTTTAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: RSGWTDTAGTHSKAPFHSQPDRA*VEFKPQ
Trigger: CTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTG...GCTGTGGAAGGGTGCTTTACTGTGTGTTCCCGCAGTGTCTGTCCACCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp TCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGCAACCTGAATGCCTCTTaGGGAGGCGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: SSPIHIHQERPGACHPAGNLNAS*GGGSTQ
Trigger: CTGCGTGCTGCCGCCTCCCCAAGAGGCATTCAGGTT...GCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp GGGTTAGGCCAGAGGGTGAGGCTGGGTGTTGCAAGTCATTCAGGGGAGCAGAAAGAGGTCTGTAGGCTTTaGGACTTGGTGTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLGQRVRLGVASHSGEQKEVCRL*DLVSGP
Trigger: GGGGCCAGACACCAAGTCCCAAAGCCTACAGACCTC...TTTCTGCTCCCCTGAATGACTTGCAACACCCAGCCTCACCCTCTGGCCTAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp TCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGCTTTCCTCCACAGGAGTaGATGCAGGACAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSPIHIHQERPGACHPAGFPPQE*MQDRGR
Trigger: CCTCCCCCTGTCCTGCATTCACTCCTGTGGAGGAAA...GCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGAGGACTTTCCGGATGTaGAGAGCTCTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQRRTFRM*RALSCR
Trigger: CCTGCAGGAGAGAGCTCTGCACATCCGGAAAGTCCT...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp ATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGATGTTGCCATGCTTCCTCCTCTaGTGTAGACAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: IPLDSQIGRGWSLNPRMLPCFLL*CRQGPP
Trigger: TGGAGGGCCCTGTCTACAGCAGAGGAGGAAGCATGG...CAACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR GCA 90 bp TTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACCCATGCTTCCTCCTCTaGTGTAGACAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGGSCPRTDCHQVCDAINPCFLL*CRQGPP
Trigger: TGGAGGGCCCTGTCTACAGCAGAGGAGGAAGCATGG...GTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp ATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGATGTTGTCATCGCTCGTGTGGTaGTCTGCGGTCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: IPLDSQIGRGWSLNPRMLSSLVW*SAVTSW
Trigger: CCAGGATGTGACCGCAGAGCACCACACGAGCGATGA...CAACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR GCA 90 bp AATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGATGTTTGGGGCTTGTCATCCTaGTGGCACGGGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: NPSRQPDRAWVEFKPQDVWGLSS*WHGARF
Trigger: AAACCTGGCCCCGTGCCAGCAGGATGACAAGCCCCA...AACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGAGGATATGTCATGGTCGTTCTaGTCCCCAGCCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSTHRLPPGLRCYQQREDMSWSF*SPARGS
Trigger: GGACCCCCTGGCTGGGGACCAGAACGACCATGACAT...ATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCGCTTGGCAGGACACCTaGTCGTGGCCCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSAWQDT*SWPSGT
Trigger: AGTGCCAGAGGGCCACGACCAGGTGTCCTGCCAAGC...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGATCAGCTCATTCACGTaGGCTTGGCAGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: GKGEAIPRASFSRFWETGISSFT*AWQDTW
Trigger: CCAGGTGTCCTGCCAAGCCCACGTGAATGAGCTGAT...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGCTCGTCATCGCTCGTGTaGTGCTCTGCGGTCACATCC +
Preference number: 4 (lower is better)
Translates to: SSPIHIHQERPGACHPAGSSSLV*CSAVTS
Trigger: GGATGTGACCGCAGAGCACCACACGAGCGATGACGA...GCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp AAATTTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATGAGCCGGGAAGAGGCTaGGAGGGTGCAGACTCACTC +
Preference number: 4 (lower is better)
Translates to: KFGRVLSTHRLPPGLRCYEPGRG*EGADSL
Trigger: GAGTGAGTCTGCACCCTCCCAGCCTCTTCCCGGCTC...ATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CTCAGGACAAAGCTTTCCTTAGGGACATCGTGGCCTCCTTTCCTCCACAGGAGTGGCTTGTCATCCTGCTaGCACGGGGCCAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LRTKLSLGTSWPPFLHRSGLSSC*HGARFQ
Trigger: CTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGCC...ACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAGCTTTGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CAA 72 bp GGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTaGCGATGCTATCAACAGAGGGAGGATTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRVLSTHRLPPG*RCYQQREDFPA
Trigger: TGCAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp GCTTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCCTGAACTGTGATAAATaGTTGAGGAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ACHPAGTGPGFRAWRKEVLNCDK*LRKAKR
Trigger: CCTCTTTGCCTTCCTCAATCATTTATCACAGTTCAG...GACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp GGGTTAGGCCAGAGGGTGAGGCTGGGTGTTGCAAGTCATTCAGGGGAGCAGAAAGGTCACATCCTGGGTTaGGTCTTCAACCGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GLGQRVRLGVASHSGEQKGHILG*VFNRGS
Trigger: ACTACCTCGGTTGAAGACTCAACCCAGGATGTGACC...TTTCTGCTCCCCTGAATGACTTGCAACACCCAGCCTCACCCTCTGGCCTAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp GAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGCAAAGAGACTGGTCTATaGCCAGGAGAGGCTACACAT +
Preference number: 4 (lower is better)
Translates to: ERYGLQLAELRRLGEAEGKETGL*PGEATH
Trigger: ATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCTTT...GCCCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AGGTCTGGGTGGACAGACACTGCGGGAACACACAGTAAAGCACCCTTCCACAGCGCCACACACAGACTCTaGATCTTTGCACGAACACGG +
Preference number: 4 (lower is better)
Translates to: RSGWTDTAGTHSKAPFHSATHRL*IFARTR
Trigger: CCGTGTTCGTGCAAAGATTCAGAGTCTGTGTGTGGC...GCTGTGGAAGGGTGCTTTACTGTGTGTTCCCGCAGTGTCTGTCCACCCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp GCTATCAACAGAGGGAGGATTTCCCTGCAGAACGAGCCGGGAAGAGGCTGGGAGTCTCCCAGGGTTTTCTaGAGAAGGTCATGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AINRGRISLQNEPGRGWESPRVF*RRSCLA
Trigger: AGCCAAGCATGACCTTCTGCAGAAAACCCTGGGAGA...CTCCCAGCCTCTTCCCGGCTCGTTCTGCAGGGAAATCCTCCCTCTGTTGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CCTAGTAGAAGCCACACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGAGCTTGGCAGGACACCTaGTCGTGGCCCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: PSRSHTQTLNLCTNTGQGAWQDT*SWPSGT
Trigger: AGTGCCAGAGGGCCACGACCAGGTGTCCTGCCAAGC...TCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTGTGGCTTCTACTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp CATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGTCATTCACGTGGGCTTaGCAGGACACCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: HHLQSIFIRSALGLVILLSFTWA*QDTWSW
Trigger: CCACGACCAGGTGTCCTGCCAAGCCCACGTGAATGA...CAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CTCAGGACAAAGCTTTCCTTAGGGACATCGTGGCCTCCTTTCCTCCACAGGAGTAGCTGGCCCCCGCTCTaGCTGTCACCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRTKLSLGTSWPPFLHRSSWPPL*LSPFLQ
Trigger: CTGAAGAAAAGGTGACAGCCAGAGCGGGGGCCAGCT...ACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAGCTTTGTCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATGTACTGGCGCTGCGCTaGAAGGCGGGCTCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYVLALR*KAGSGS
Trigger: GGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGTAC...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGAGCCACAATGAAAGCTaGGGGTCAGAGGTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RRIPLDSQIGRGWSLNPRSHNES*GSEVRA
Trigger: GGCTCTTACCTCTGACCCCCAGCTTTCATTGTGGCT...CCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp TACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCGGCTTGTCATCCTGCTaGCACGGGGCCAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: YIISNPYSSGAPWGLSSCGLSSC*HGARFQ
Trigger: CTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGCC...GCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
3UTR CAA 72 bp CAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGATGTaGCTAACAGCCACAATGAAAGCTGGGGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QIGRGWSLNPRM*LTATMKAGGQR
Trigger: CCTCTGACCCCCAGCTTTCATTGTGGCTGTTAGCAACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGTCCGTGTACTTGGCTTaGCGCTTCTCCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GKGEAIPRASFSRFWETGSVYLA*RFSFIF
Trigger: GAAGATGAAGGAGAAGCGTCAAGCCAAGTACACGGA...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGAGCACGGATCTCTTTaGCCTGAGTATCGTACTCTG +
Preference number: 4 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQREHGSL*PEYRTL
Trigger: CAGAGTACGATACTCAGGTCAAAGAGATCCGTGCTC...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGCAGGTGGCTCAGAAATaGCCTCAATCTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQRQVAQK*PQSQTW
Trigger: CCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTG...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGGGCTGGAGGGCTCTaGCGTGGGGGCCACCACTGG +
Preference number: 4 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFRAGGL*RGGHHW
Trigger: CCAGTGGTGGCCCCCACGTCAGAGCCCTCCAGCCCT...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp TCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCACACCTCTTGATCCTGTGGTaGAGTCATAATGCTAAATTT +
Preference number: 4 (lower is better)
Translates to: STVWWLWRRRRRGRTPPHLLILW*SHNAKF
Trigger: AAATTTAGCATTATGACTTCACCACAGGATCAAGAG...GTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp CGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGTGGTGTCTGGCCCCTTaGGATGAGATTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RRIPLDSQIGRGWSLNPRWCLAP*DEISSP
Trigger: TGGAGAACTAATCTCATCTCAAGGGGCCAGACACCA...CCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR GCA 90 bp CGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGAGGATTTCCCTGAGGACTTTCCGGATGTaGAGAGCTCTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RTDCHQVCDAINRGRISLRTFRM*RALSCR
Trigger: CCTGCAGGAGAGAGCTCTGCACATCCGGAAAGTCCT...CAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp ACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTCCATGCTTCCTCCTCTaGTGTAGACAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSSPIHIHQERPGACHPAPCFLL*CRQGPP
Trigger: TGGAGGGCCCTGTCTACAGCAGAGGAGGAAGCATGG...AGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR GCA 90 bp TACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCCAGCCCTGTCCGCCTTaGAGCAGCAATGACCACATG +
Preference number: 4 (lower is better)
Translates to: YIISNPYSSGAPWGLSSCQPCPP*SSNDHM
Trigger: CATGTGGTCATTGCTGCTGCAAGGCGGACAGGGCTG...GCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCATGGAATCCATGTCATaGTCGTTCTGGTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPMESMS*SFWSPA
Trigger: GGCTGGGGACCAGAACGACCATGACATGGATTCCAT...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp ACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTCAGGACACCTGGTCGTaGCCCTCTGGCACTGACATT +
Preference number: 4 (lower is better)
Translates to: TSSPIHIHQERPGACHPAQDTWS*PSGTDI
Trigger: AATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTG...AGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTCATTCACGTGGGCTTaGCAGGACACCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSSFTWA*QDTWSW
Trigger: CCACGACCAGGTGTCCTGCCAAGCCCACGTGAATGA...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CAGGATGTTGCTAACAGCCACAATGAAAGCTGGGGGTCAGAGGTAAGAGCCTGCATCAGCTCATTCACGTaGGCTTGGCAGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: QDVANSHNESWGSEVRACISSFT*AWQDTW
Trigger: CCAGGTGTCCTGCCAAGCCCACGTGAATGAGCTGAT...GCAGGCTCTTACCTCTGACCCCCAGCTTTCATTGTGGCTGTTAGCAACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp AATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGATGTTCAGCTCCCTGGGGCTTaGGAAGATGTTCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: NPSRQPDRAWVEFKPQDVQLPGA*EDVLML
Trigger: CAGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTG...AACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp TTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACTCTGCGGTCACATCCTaGGTTGAGTCTTCAACCGAG +
Preference number: 4 (lower is better)
Translates to: LGGSCPRTDCHQVCDAINSAVTS*VESSTE
Trigger: CTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGA...GTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGTCGTCATCGCTCGTGTaGTGCTCTGCGGTCACATCC +
Preference number: 4 (lower is better)
Translates to: VHHLQSIFIRSALGLVILSSSLV*CSAVTS
Trigger: GGATGTGACCGCAGAGCACCACACGAGCGATGACGA...CAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTCTCAGACTTGGGGCTaGACCTCTCCACGACACCGT +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSSQTWG*TSPRHR
Trigger: ACGGTGTCGTGGAGAGGTCCAGCCCCAAGTCTGAGA...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp ACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTTCTCAGACTTGGGGCTaGACCTCTCCACGACACCGT +
Preference number: 4 (lower is better)
Translates to: TSSPIHIHQERPGACHPASQTWG*TSPRHR
Trigger: ACGGTGTCGTGGAGAGGTCCAGCCCCAAGTCTGAGA...AGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCCCCACTGGGACAGCTaGCCCCCGCTCTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYPHWDS*PPLWLS
Trigger: TGACAGCCAGAGCGGGGGCCAGCTGTCCCAGTGGGG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGAACTGCTCAGCCCATaGCTGTCACTCCGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQRELLSP*LSLRKV
Trigger: AACTTTTCGGAGTGACAGCCATGGGCTGAGCAGTTC...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGAGGATCTCCTCAGGAAAGCGTaGCTAGGGGACACCTGGATT +
Preference number: 4 (lower is better)
Translates to: LSTHRLPPGLRCYQQREDLLRKA*LGDTWI
Trigger: AATCCAGGTGTCCCCTAGCCACGCTTTCCTGAGGAG...ATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp CATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGCAGATCGGGCGTGGGTaGAGTTTAAACCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HHLQSIFIRSALGLVILLQIGRG*SLNPRM
Trigger: CATCCTGGGGTTTAAACTCCACCCACGCCCGATCTG...CAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCCAGCCAGATCGGGCGTaGGTGGAGTTTAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSQPDRA*VEFKPQ
Trigger: CTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTG...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp AGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTGGACAGACACTGCGGGAACCCAGGTTTCAGGGCCTaGCGGAAAGAGGTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SFSCKTATKVWVDRHCGNPGFRA*RKEVCR
Trigger: CCTACAGACCTCTTTCCGCCAGGCCCTGAAACCTGG...GTTCCCGCAGTGTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp AGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTGGATCTGAACTGTGATAAATaGTTGAGGAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSAGSSAPQESVARGHLDLNCDK*LRKAKR
Trigger: CCTCTTTGCCTTCCTCAATCATTTATCACAGTTCAG...ATCCAGGTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp TCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGCCAGGTGGCTCAGAAATaGCCTCAATCTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: SSPIHIHQERPGACHPAGQVAQK*PQSQTW
Trigger: CCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTG...GCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp GCTTTGGTCAAAGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTGGACAGACGAGGTAAGAGCCTGCTaGGCAGGAGTGGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: ALVKVLAVRLPQRSGWTDEVRAC*AGVGIC
Trigger: GCAGATCCCCACTCCTGCTCAGCAGGCTCTTACCTC...GTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACTTTGACCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp CTAGGGGACACCTGGATTCGAGGCATCTGCCTTCTACCCCATGCTGCTTCCTGGTTCTGCAGAAGGTCATaGTTGGCTTGTAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LGDTWIRGICLLPHAASWFCRRS*LACNLV
Trigger: CACCAAGTTACAAGCCAAGCATGACCTTCTGCAGAA...CCAGGAAGCAGCATGGGGTAGAAGGCAGATGCCTCGAATCCAGGTGTCCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp ATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGTGCGCCTGGCTAGACTaGAATCTGTCCGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: IISNPYSSGAPWGLSSCWCAWLD*NLSADF
Trigger: AAAGTCAGCGGACAGATTGCAGTCTAGCCAGGCGCA...CCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGAAAAGTTTTCCGGATaGTCCCAGATTCTGGACGCT +
Preference number: 4 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQREKFSG*SQILDA
Trigger: AGCGTCCAGAATCTGGGAGCATCCGGAAAACTTTTC...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp ACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTGGAGACCTGGACAGACTCTGAATCTTTaGACGAACACGGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: THSKAPFHSTRAASWRPGQTLNL*TNTGQG
Trigger: TCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTG...TCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp GTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTCCACAGGAGTGAATaGAGGACAGGGGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: VHHLQSIFIRSALGLVILLHRSE*RTGGGT
Trigger: TGTTCCTCCCCCTGTCCTGCATTCACTCCTGTGGAG...CAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCCAGTTGAGCTGCGCCTaGCTAGACTGCAATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSQLSCA*LDCNLS
Trigger: GGACAGATTGCAGTCTAGCCAGGCGCAGCTCAACTG...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp CGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACTCAGGACACCAGCTATaGAATCCATGTCATGGTCGT +
Preference number: 4 (lower is better)
Translates to: RRRRIPLDSQIGRGWSLNSGHQL*NPCHGR
Trigger: ACGACCATGACATGGATTCCATAGCTGGTGTCCTGA...GTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp GGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGTCAGGACACCAGCTATaGAATCCATGTCATGGTCGT +
Preference number: 4 (lower is better)
Translates to: GSCPRTDCHQVCDAINRGSGHQL*NPCHGR
Trigger: ACGACCATGACATGGATTCCATAGCTGGTGTCCTGA...CCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp ACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTGGAGACCTGGACATGAAAGATGTCCTTaGGGAAGAGAGGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: THSKAPFHSTRAASWRPGHERCP*GREGVP
Trigger: TGGAACACCCTCTCTTCCCCAAGGACATCTTTCATG...TCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGCATGAAAGATGTCCTTaGGGAAGAGAGGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GKGEAIPRASFSRFWETGHERCP*GREGVP
Trigger: TGGAACACCCTCTCTTCCCCAAGGACATCTTTCATG...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATGCTTGGCAGGACACCTaGTCGTGGCCCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHAWQDT*SWPSGT
Trigger: AGTGCCAGAGGGCCACGACCAGGTGTCCTGCCAAGC...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCCAGCTCCCTGGGGCTTaGGAAGATGTTCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: YIISNPYSSGAPWGLSSCQLPGA*EDVLML
Trigger: CAGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTG...GCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp CTTTCCTTAGGGACATCGTGGCCTCCTTTCCTCCACAGGAGTGAATGCAGGACATCTGCGGTCACATCCTaGGTTGAGTCTTCAACCGAG +
Preference number: 4 (lower is better)
Translates to: LSLGTSWPPFLHRSECRTSAVTS*VESSTE
Trigger: CTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGA...TGTCCTGCATTCACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCTGGCAATGGCCTCGATaGGCTCACATTCGTCATCGC +
Preference number: 4 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCWQWPR*AHIRHR
Trigger: GCGATGACGAATGTGAGCCCATCGAGGCCATTGCCA...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCTACATGACCCCCACTaGGACAGCTGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYLHDPH*DSWPPL
Trigger: GAGCGGGGGCCAGCTGTCCCAGTGGGGGTCATGTAG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCTTGACCTTCCCGCTGTaGCAGTCTTCCGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCLTFPL*QSSGSV
Trigger: CACAGATCCGGAAGACTGCCACAGCGGGAAGGTCAA...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TCTAAGCCCCTGTTGGTCCCTGAAGAGAGACCTTGTAAAATAAGGAAACTAAGGGGGCCGTGTGGCTGGTaGTTTGACCGGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SKPLLVPEERPCKIRKLRGPCGW*FDRGSH
Trigger: ATGGCTGCCCCGGTCAAACCACCAGCCACACGGCCC...CCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTCCTTAGGGACATCGTaGCCTCCTTTCCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSSLGTS*PPFLHR
Trigger: CCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGA...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp CGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACTTGGGACTTGGTGTCTaGCCCCTTGAGATGAGATTA +
Preference number: 4 (lower is better)
Translates to: RRRRIPLDSQIGRGWSLNLGLGV*PLEMRL
Trigger: TAATCTCATCTCAAGGGGCCAGACACCAAGTCCCAA...GTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp CGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGAGGATTTCCCTGTCCGTGTACTTGGCTTaGCGCTTCTCCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: RTDCHQVCDAINRGRISLSVYLA*RFSFIF
Trigger: GAAGATGAAGGAGAAGCGTCAAGCCAAGTACACGGA...CAGGGAAATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCCAGGCCATCAGGTCATaGAAGATGTCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSQAIRS*KMSLGK
Trigger: CTTCCCCAAGGACATCTTTCATGACCTGATGGCCTG...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATGGCTCCCGTGCCCACTaGTGGAACACTTATCTGGCC +
Preference number: 4 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHGSRAH*WNTYLA
Trigger: GGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCC...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp GTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGAGTTCTCCAATAACCTaGATGCCTCTTGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VHHLQSIFIRSALGLVILSSPIT*MPLGEA
Trigger: CGCCTCCCCAAGAGGCATTCAGGTTATTGGAGAACT...CAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp CTTTCCTTAGGGACATCGTGGCCTCCTTTCCTCCACAGGAGTGAATGCAGGACATGGTGTCTGGCCCCTTaGGATGAGATTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSLGTSWPPFLHRSECRTWCLAP*DEISSP
Trigger: TGGAGAACTAATCTCATCTCAAGGGGCCAGACACCA...TGTCCTGCATTCACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGGGGGAGGCTAATTCCTaGAAGAACAACTTAGAACCT +
Preference number: 4 (lower is better)
Translates to: GKGEAIPRASFSRFWETGGEANS*KNNLEP
Trigger: AGGTTCTAAGTTGTTCTTGCAGGAATTAGCCTCCCC...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
52% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp AAATTTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATTGGATTCGAGGCATCTaGCTTCTACCCCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: KFGRVLSTHRLPPGLRCYWIRGI*LLPHAA
Trigger: AGCAGCATGGGGTAGAAGGCAGATGCCTCGAATCCA...ATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp ACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGCAGCAATGACCACATaGAAACTGTTAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TSSPIHIHQERPGACHPAAAMTT*KLLGWG
Trigger: CCCCCAGCCTAACAGTTTGCATGTGGTCATTGCTGC...AGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCGAGGAATTGCCTGGCTaGAGTCCTGTTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSEELPG*SPVSSQ
Trigger: CTGTGAGGAAACAGGACTCCAGCCAGGCAATTCCTC...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATGTCATGGTCGTTCTaGTCCCCAGCCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHMSWSF*SPARGS
Trigger: GGACCCCCTGGCTGGGGACCAGAACGACCATGACAT...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCTCTGCGGTCACATCCTaGGTTGAGTCTTCAACCGAG +
Preference number: 4 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCSAVTS*VESSTE
Trigger: CTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGA...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAATGGCTCATGATGGGCTaGGAGGATGGGCGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: METETPGGYCVNCHNNLQWLMMG*EDGRQL
Trigger: TAGCTGCCGCCCATCCTCCCAGCCCATCATGAGCCA...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGATGTCCCCAGCAGTACTaGCGCTGCGCTGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: EARANTNDQFTSMERTQRCPQQY*RCAGRR
Trigger: CCGCCTTCCAGCGCAGCGCCAGTACTGCTGGGGACA...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGACTTGGGCCGTGTGGCTaGTGGTTTGACCGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EARANTNDQFTSMERTQRLGPCG*WFDRGS
Trigger: GCTGCCCCGGTCAAACCACCAGCCACACGGCCCAAG...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCTTTCGATTCTGGCCTTaGGAAGACTTGAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPFRFWP*EDLRAC
Trigger: ACAGGCTCTCAAGTCTTCCCAAGGCCAGAATCGAAA...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAAAACCTGAATGCCTCTTaGGGAGGCGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: HTDSESLHEHGSRKTDIKNLNAS*GGGSTQ
Trigger: CTGCGTGCTGCCGCCTCCCCAAGAGGCATTCAGGTT...TTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp TCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGGCTTGGGACTTGGTGTCTaGCCCCTTGAGATGAGATTA +
Preference number: 4 (lower is better)
Translates to: SSPIHIHQERPGACHPAGLGLGV*PLEMRL
Trigger: TAATCTCATCTCAAGGGGCCAGACACCAAGTCCCAA...GCCAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp CATAATGCTAAATTTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGGGTCACATCCTGGGTTaGGTCTTCAACCGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: HNAKFGRVLSTHRLPPGLGHILG*VFNRGS
Trigger: ACTACCTCGGTTGAAGACTCAACCCAGGATGTGACC...CAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAAATTTAGCATTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCCAGGTGGCTCAGAAATaGCCTCAATCTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSQVAQK*PQSQTW
Trigger: CCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTG...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp ATAAAAATAAATAATCCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCTTGTGGTTTATCGGCTaGGGTCCTGAGCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: IKINNPLSSAGSSAPQESLWFIG*GPEHCR
Trigger: CCGGCAGTGCTCAGGACCTCAGCCGATAAACCACAA...GCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGGATTATTTATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAACCATGCTTCCTCCTCTaGTGTAGACAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: METETPGGYCVNCHNNLQPCFLL*CRQGPP
Trigger: TGGAGGGCCCTGTCTACAGCAGAGGAGGAAGCATGG...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp ATAAAAATAAATAATCCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCTCATCGCTCGTGTGGTaGTCTGCGGTCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: IKINNPLSSAGSSAPQESSSLVW*SAVTSW
Trigger: CCAGGATGTGACCGCAGAGCACCACACGAGCGATGA...GCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGGATTATTTATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCGATGGAACACTTATCTaGCCCTTCTTTGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCDGTLI*PFFGEA
Trigger: AGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATC...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTGGGTGTGCAGAGGGCTaGAGGGCTCTGACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTGCAEG*RALTWG
Trigger: CCCCCACGTCAGAGCCCTCCAGCCCTCTGCACACCC...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCTCATTCTCAAGGTTTTaGGAGACGGGGAGGCTAATT +
Preference number: 4 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPSFSRF*ETGRLI
Trigger: AATTAGCCTCCCCGTCTCCCAAAACCTTGAGAATGA...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGGTTTGGAGACTGAATTaGAGCAGACAAGGGTATGAT +
Preference number: 4 (lower is better)
Translates to: GKGEAIPRASFSRFWETGVWRLN*SRQGYD
Trigger: ATCATACCCTTGTCTGCTCCAATTCAGTCTCCAAAC...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAATGCAAACTGTTAGGCTaGGGGAGCTGGGAGCCCTAC +
Preference number: 4 (lower is better)
Translates to: HTDSESLHEHGSRKTDIKCKLLG*GSWEPY
Trigger: GTAGGGCTCCCAGCTCCCCCAGCCTAACAGTTTGCA...TTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
3UTR CAA 72 bp AATGCTAAATTTGGGAGGGTCCTGTCCACGCACAGATaGCCACCAGGTTTGCGATGCTATCAACAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NAKFGRVLSTHR*PPGLRCYQQRE
Trigger: CTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAAATTTAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTGGAGGCTCTGGCTCATaGTGGGCTGGGAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTGGSGS*WAGRMG
Trigger: GCCCATCCTCCCAGCCCATCATGAGCCAGAGCCTCC...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp GGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGCAATTCATCTTCTCTTaGTCCTGTGGTGAAGTCATA +
Preference number: 4 (lower is better)
Translates to: GSCPRTDCHQVCDAINRGQFIFS*SCGEVI
Trigger: TATGACTTCACCACAGGATCAAGAGAAGATGAATTG...CCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp GCTTTGGTCAAAGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTGGACAGACCACCACCAGAGGAATTaGCTGGCTGGAGTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: ALVKVLAVRLPQRSGWTDHHQRN*LAGVLF
Trigger: AAACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTG...GTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACTTTGACCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp GTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCACAGTAATCCTCCATaGTTCCTCCTCTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VHHLQSIFIRSALGLVILHSNPP*FLLCCR
Trigger: TCTACAGCAGAGGAGGAAGCATGGAGGATTACTGTG...CAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR GCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCCACAGTAATCCTCCATaGTTCCTCCTCTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCHSNPP*FLLCCR
Trigger: TCTACAGCAGAGGAGGAAGCATGGAGGATTACTGTG...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TCTAAGCCCCTGTTGGTCCCTGAAGAGAGACCTTGTAAAATAAGGAAACTAAGGTCGTCATCGCTCGTGTaGTGCTCTGCGGTCACATCC +
Preference number: 4 (lower is better)
Translates to: SKPLLVPEERPCKIRKLRSSSLV*CSAVTS
Trigger: GGATGTGACCGCAGAGCACCACACGAGCGATGACGA...CCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAATGGCAATGGCCTCGATaGGCTCACATTCGTCATCGC +
Preference number: 4 (lower is better)
Translates to: HTDSESLHEHGSRKTDIKWQWPR*AHIRHR
Trigger: GCGATGACGAATGTGAGCCCATCGAGGCCATTGCCA...TTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp CCTTTATTCTCCTTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACAGGTTTTCACCTCAATCTCAGACTTaGGGCTGGACCTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: PLFSFQSQCPEATVNRFSPQSQT*GWTSPR
Trigger: TCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGG...TGAAAACCTGTTAACCGTAGCCTCTGGACACTGAGACTGGAAGGAGAATAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp ACAAGCATCCTTTATTCTCCTTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACACCACAAAGGTCTGGGTaGACAGACACTGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: TSILYSPSSLSVQRLRLTPQRSG*TDTAGT
Trigger: TGTTCCCGCAGTGTCTGTCCACCCAGACCTTTGTGG...TGTTAACCGTAGCCTCTGGACACTGAGACTGGAAGGAGAATAAAGGATGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp TGTAGCAGCATCCTCAGCCCTGTCCGCCTTGCAGCAGCAATGACCACATGCAAACTCAATAAACCCACCTaGTGTAACATCAGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: CSSILSPVRLAAAMTTCKLNKPT*CNISLV
Trigger: TACTAGGCTGATGTTACACCAGGTGGGTTTATTGAG...TTTGCATGTGGTCATTGCTGCTGCAAGGCGGACAGGGCTGAGGATGCTGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp TTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACACTGTGATAAATGATTaGGGAAGGCAAAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: LGGSCPRTDCHQVCDAINTVIND*GRQRGI
Trigger: GATACCTCTTTGCCTTCCTCAATCATTTATCACAGT...GTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTGGCCTTGGGAAGACTTaGGAGCCTGTGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTGLGKT*EPVGSG
Trigger: CCCTGACCCCACAGGCTCTCAAGTCTTCCCAAGGCC...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp ACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTCCAGGTTGCATAAAGTaGCCAAAGCTTTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TSSPIHIHQERPGACHPAPGCIK*PKLWSK
Trigger: CTTTGACCAAAGCTTTGGTCACTTTATGCAACCTGG...AGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp ACAAGCATCCTTTATTCTCCTTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACAAGTTCTCCAATAACCTaGATGCCTCTTGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TSILYSPSSLSVQRLRLTSSPIT*MPLGEA
Trigger: CGCCTCCCCAAGAGGCATTCAGGTTATTGGAGAACT...TGTTAACCGTAGCCTCTGGACACTGAGACTGGAAGGAGAATAAAGGATGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp ATAAAAATAAATAATCCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCTGCGCCTGGCTAGACTaGAATCTGTCCGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: IKINNPLSSAGSSAPQESCAWLD*NLSADF
Trigger: AAAGTCAGCGGACAGATTGCAGTCTAGCCAGGCGCA...GCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGGATTATTTATTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR GCA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAATGCGCCTGGCTAGACTaGAATCTGTCCGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: METETPGGYCVNCHNNLQCAWLD*NLSADF
Trigger: AAAGTCAGCGGACAGATTGCAGTCTAGCCAGGCGCA...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp CCTAGTAGAAGCCACACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGACACAGTAATCCTCCATaGTTCCTCCTCTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: PSRSHTQTLNLCTNTGQGHSNPP*FLLCCR
Trigger: TCTACAGCAGAGGAGGAAGCATGGAGGATTACTGTG...TCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTGTGGCTTCTACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCAGTTGAGCTGCGCCTaGCTAGACTGCAATCTGTCC +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYQLSCA*LDCNLS
Trigger: GGACAGATTGCAGTCTAGCCAGGCGCAGCTCAACTG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGACAGGACACCTGGTCGTaGCCCTCTGGCACTGACATT +
Preference number: 4 (lower is better)
Translates to: EARANTNDQFTSMERTQRQDTWS*PSGTDI
Trigger: AATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTG...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCAGCTCCCTGGGGCTTaGGAAGATGTTCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYQLPGA*EDVLML
Trigger: CAGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCTCTCAGACTTGGGGCTaGACCTCTCCACGACACCGT +
Preference number: 4 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFSQTWG*TSPRHR
Trigger: ACGGTGTCGTGGAGAGGTCCAGCCCCAAGTCTGAGA...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp CTCAGGACAAAGCTTTCCTTAGGGACATCGTGGCCTCCTTTCCTCCACAGGAGTCACCTTTTCTTCAGGTaGCTCAGAAATGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: LRTKLSLGTSWPPFLHRSHLFFR*LRNDLN
Trigger: ATTGAGGTCATTTCTGAGCCACCTGAAGAAAAGGTG...ACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAGCTTTGTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp TCTAAGCCCCTGTTGGTCCCTGAAGAGAGACCTTGTAAAATAAGGAAACTAAGGGGTACGGACTGCAGCTaGCTGAATTACGACGACTGG +
Preference number: 4 (lower is better)
Translates to: SKPLLVPEERPCKIRKLRGTDCS*LNYDDW
Trigger: CCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACC...CCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TCTAAGCCCCTGTTGGTCCCTGAAGAGAGACCTTGTAAAATAAGGAAACTAAGGGTCAAGGCATCACCGTaGTCTGAGGGGACTGAGACT +
Preference number: 4 (lower is better)
Translates to: SKPLLVPEERPCKIRKLRVKASP*SEGTET
Trigger: AGTCTCAGTCCCCTCAGACCACGGTGATGCCTTGAC...CCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCAACTTACAAAGAGACTaGTCTATGACCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCNLQRD*SMTRRG
Trigger: GCCTCTCCTGGTCATAGACCAGTCTCTTTGTAAGTT...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
3UTR CAA 72 bp AGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATaGTCCCATCCCGTTATGTTTCATATGATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: REKAPNPKQVTG*SHPVMFHMMER
Trigger: TCTCTCCATCATATGAAACATAACGGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573034.7
ENST00000624873.3
CDS-3UTR TCA 90 bp CTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACAGAGGGAGGATTCTCAAAGGCATTTTTaGTGTCATTCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LSTHRLPPGLRCYQQREDSQRHF*CHSLPP
Trigger: AGGTGGAAGTGAATGACATCAAAAATGCCTTTGAGA...ATCCTCCCTCTGTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR TCA 90 bp CTGTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCCTGAACTGTGATAAATaGTTGAGGAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LYIISNPYSSGAPWGLSSLNCDK*LRKAKR
Trigger: CCTCTTTGCCTTCCTCAATCATTTATCACAGTTCAG...GGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR TCA 90 bp TCTAAGCCCCTGTTGGTCCCTGAAGAGAGACCTTGTAAAATAAGGAAACTAAGGGGTCACATCCTGGGTTaGGTCTTCAACCGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SKPLLVPEERPCKIRKLRGHILG*VFNRGS
Trigger: ACTACCTCGGTTGAAGACTCAACCCAGGATGTGACC...CCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGACCGATTCTTCAGGGATaGGTGGCGGCTGATGGAGTT +
Preference number: 4 (lower is better)
Translates to: EARANTNDQFTSMERTQRPILQG*VAADGV
Trigger: AACTCCATCAGCCGCCACTCATCCCTGAAGAATCGG...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATTGGGCCGATGGTTATTaGAGCTTTTTGACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHWADGY*SFLTFP
Trigger: CGGGAAGGTCAAAAAGCTTCAATAACCATCGGCCCA...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGACAATATCCTGAGCAATaGCCTCAGGGTCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: EARANTNDQFTSMERTQRQYPEQ*PQGPWA
Trigger: GGCCCATGGACCCTGAGGTCATTGCTCAGGATATTG...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCACCACCAGAGGAATTaGCTGGCTGGAGTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYHHQRN*LAGVLF
Trigger: AAACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATGAGTTGAGGCTCCCGTaGCCACTGATGGAACACTTA +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYELRLP*PLMEHL
Trigger: TAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTC...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAATGTTTGACACTGCTCTaGCGTTCTAGTTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: METETPGGYCVNCHNNLQCLTLL*RSSSRS
Trigger: GCTACGGGAACTAGAACGGCAGAGCAGTGTCAAACA...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp TGGGAAGACTTGAGAGCCTGTGGGGTCAGGGTTCCCTTAATTGTCCTTGTTTGCCAAGGGTATGATTTGTaGATTTTGGAAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: WEDLRACGVRVPLIVLVCQGYDL*ILEGNQ
Trigger: CTGGTTCCCTTCCAAAATGCACAAATCATACCCTTG...GCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp GTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCACCTTTTCTTCAGGTaGCTCAGAAATGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: VHHLQSIFIRSALGLVILHLFFR*LRNDLN
Trigger: ATTGAGGTCATTTCTGAGCCACCTGAAGAAAAGGTG...CAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATAACAGAGACCCCTGGTaGCTACTGTGTGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYNRDPW*LLCELP
Trigger: TGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTT...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TCTAAGCCCCTGTTGGTCCCTGAAGAGAGACCTTGTAAAATAAGGAAACTAAGGGGAAACAGAGACCCCTaGTGGCTACTGTGTGAACTG +
Preference number: 4 (lower is better)
Translates to: SKPLLVPEERPCKIRKLRGNRDP*WLLCEL
Trigger: CAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCC...CCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCCAGGCCATCAGGTCATaGAAGATGTCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFQAIRS*KMSLGK
Trigger: CTTCCCCAAGGACATCTTTCATGACCTGATGGCCTG...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp CACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAAGGGTTAGCCAATGAATaGAGAGCTCAGGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: HTDSESLHEHGSRKTDIKGLANE*RAQDKA
Trigger: AGCTTTGTCCTGAGCTCTTCATTCATTGGCTAACCC...TTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp ATAAAAATAAATAATCCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCCACAGTAATCCTCCATaGTTCCTCCTCTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: IKINNPLSSAGSSAPQESHSNPP*FLLCCR
Trigger: TCTACAGCAGAGGAGGAAGCATGGAGGATTACTGTG...GCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGGATTATTTATTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGATTCTTCAGGGATGAGTaGCGGCTGATGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: EARANTNDQFTSMERTQRFFRDE*RLMELR
Trigger: CCTCAACTCCATCAGCCGCCACTCATCCCTGAAGAA...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATAGTCTTCCGGATCTGTaGACTATCCAGCCGATTCTT +
Preference number: 4 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHSLPDL*TIQPIL
Trigger: AAGAATCGGCTGGATAGTCCACAGATCCGGAAGACT...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp TCTAAGCCCCTGTTGGTCCCTGAAGAGAGACCTTGTAAAATAAGGAAACTAAGGTCTCTAAGCCCCTGTTaGTCCCTGAAGAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: SKPLLVPEERPCKIRKLRSLSPC*SLKRDL
Trigger: AAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGAGA...CCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp CCTAGTAGAAGCCACACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGAACTGTGATAAATGATTaGGGAAGGCAAAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: PSRSHTQTLNLCTNTGQGTVIND*GRQRGI
Trigger: GATACCTCTTTGCCTTCCTCAATCATTTATCACAGT...TCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTGTGGCTTCTACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATGTTATTGAAGCTTTTTaGCCTTCCCGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYVIEAF*PSRCGS
Trigger: ACTGCCACAGCGGGAAGGTCAAAAAGCTTCAATAAC...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCTGGTGGCTACTGTGTaGACTGCCACAATAACTTAC +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYLVATV*TATITY
Trigger: GTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAAACAGAACAAAGTTTGTaGTGGAAACAGAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: METETPGGYCVNCHNNLQTEQSL*WKQRPL
Trigger: CAGGGGTCTCTGTTTCCATCACAAACTTTGTTCTGT...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATGAGCAGACAAGGGTATaGTTTGTGCATTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHEQTRV*FVHFGR
Trigger: CCTTCCAAAATGCACAAATCATACCCTTGTCTGCTC...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCACCAGGTTTGGAGACTaGATTGGAGCAGACAAGGGT +
Preference number: 4 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFTRFGD*IGADKG
Trigger: ACCCTTGTCTGCTCCAATTCAGTCTCCAAACCTGGT...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp CACACAGACTCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAAGGAGGAACAGACACATaGTATCTCAATAAACCCACC +
Preference number: 4 (lower is better)
Translates to: HTDSESLHEHGSRKTDIKGGTDT*YLNKPT
Trigger: GGTGGGTTTATTGAGATATCATGTGTCTGTTCCTCC...TTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATTTCTGCAGAAGGTCATaGTTGGCTTGTAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHFCRRS*LACNLV
Trigger: CACCAAGTTACAAGCCAAGCATGACCTTCTGCAGAA...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp TTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACAGGTTTTCAAAGTGCAAATCACGGAAAATTCCTTCATaGTGTAGTCCGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FQSQCPEATVNRFSKCKSRKIPS*CSPCLL
Trigger: CAGCAGACACGGACTACAGCATGAAGGAATTTTCCG...TGATTTGCACTTTGAAAACCTGTTAACCGTAGCCTCTGGACACTGAGACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCGGAAAATTCCTTCATaGTGTAGTCCGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYRKIPS*CSPCLL
Trigger: CAGCAGACACGGACTACAGCATGAAGGAATTTTCCG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTAGTCAGTCAGGGAACTaGTCAGCCCATGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTSQSGN*SAHGCH
Trigger: GTGACAGCCATGGGCTGAGCAGTTCCCTGACTGACT...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAAGAACGGTACGGACTaGAGCTGGCTGAATTACGAC +
Preference number: 4 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFKNGTD*SWLNYD
Trigger: GTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCGGAAGACAGTGGGCTTaGGCCGTGTGGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: MKTGLYMILYNQFPKQDAGRQWA*AVWLVV
Trigger: AACCACCAGCCACACGGCCCAAGCCCACTGTCTTCC...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp GCTTTGGTCAAAGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTGGACAGACTCTCAAAGGCATTTTTaGTGTCATTCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: ALVKVLAVRLPQRSGWTDSQRHF*CHSLPP
Trigger: AGGTGGAAGTGAATGACATCAAAAATGCCTTTGAGA...GTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACTTTGACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp TTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACAGGTTTTCAAAGTGCAAATCATTATTTCTCCTGGTGTaGAAGGGCAGAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: FQSQCPEATVNRFSKCKSLFLLV*KGRRKG
Trigger: CCCTTTTCTTCTGCCCTTTCACACCAGGAGAAATAA...TGATTTGCACTTTGAAAACCTGTTAACCGTAGCCTCTGGACACTGAGACTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp TCTGAATCTTTGCACGAACACGGGTCAAGGAAGACAGACATCAAAGACTATTATTCTCCCAGGGTTTTCTaGAGAAGGTCATGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SESLHEHGSRKTDIKDYYSPRVF*RRSCLA
Trigger: AGCCAAGCATGACCTTCTGCAGAAAACCCTGGGAGA...ATAATAGTCTTTGATGTCTGTCTTCCTTGACCCGTGTTCGTGCAAAGATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCTCAGGACACCAGCTATaGAATCCATGTCATGGTCGT +
Preference number: 4 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFSGHQL*NPCHGR
Trigger: ACGACCATGACATGGATTCCATAGCTGGTGTCCTGA...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCTCATTCACGTGGGCTTaGCAGGACACCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: MKTGLYMILYNQFPKQDASFTWA*QDTWSW
Trigger: CCACGACCAGGTGTCCTGCCAAGCCCACGTGAATGA...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCAGCTGGCCCCCGCTCTaGCTGTCACCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: MKTGLYMILYNQFPKQDASWPPL*LSPFLQ
Trigger: CTGAAGAAAAGGTGACAGCCAGAGCGGGGGCCAGCT...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCTGAACTGTGATAAATaGTTGAGGAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYLNCDK*LRKAKR
Trigger: CCTCTTTGCCTTCCTCAATCATTTATCACAGTTCAG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCCGTCAGGGGTGTGTTTaGCACTGCTCTGCCGTTCTA +
Preference number: 4 (lower is better)
Translates to: MKTGLYMILYNQFPKQDARQGCV*HCSAVL
Trigger: TAGAACGGCAGAGCAGTGTCAAACACACCCCTGACG...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAAGGCTACTGTGTGAACTaGCACAATAACTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: METETPGGYCVNCHNNLQGYCVN*HNNLQR
Trigger: TCTTTGTAAGTTATTGTGGCAGTTCACACAGTAGCC...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp AAACAGTACAAAACCAGGTTGCATAAAGTGACCAAAGCTTTGGTCAAAGTTTTAGGTGAGGCTGGGTGTTaGAAGTCATTCAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KQYKTRLHKVTKALVKVLGEAGC*KSFRGA
Trigger: TGCTCCCCTGAATGACTTGCAACACCCAGCCTCACC...TAAAACTTTGACCAAAGCTTTGGTCACTTTATGCAACCTGGTTTTGTACTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCCCTCAATCTCAGACTTaGGGCTGGACCTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: MKTGLYMILYNQFPKQDAPQSQT*GWTSPR
Trigger: TCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGG...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATCACCTTTTCTTCAGGTaGCTCAGAAATGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYHLFFR*LRNDLN
Trigger: ATTGAGGTCATTTCTGAGCCACCTGAAGAAAAGGTG...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATTCTCAAAGGCATTTTTaGTGTCATTCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYSQRHF*CHSLPP
Trigger: AGGTGGAAGTGAATGACATCAAAAATGCCTTTGAGA...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR TCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATACTGTGATAAATGATTaGGGAAGGCAAAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYTVIND*GRQRGI
Trigger: GATACCTCTTTGCCTTCCTCAATCATTTATCACAGT...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp AAACAGTACAAAACCAGGTTGCATAAAGTGACCAAAGCTTTGGTCAAAGTTTTATGCAGAGCTCTCTCCTaGAGGTTGTCCATTGTGACG +
Preference number: 4 (lower is better)
Translates to: KQYKTRLHKVTKALVKVLCRALS*RLSIVT
Trigger: CGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCA...TAAAACTTTGACCAAAGCTTTGGTCACTTTATGCAACCTGGTTTTGTACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR GCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCTGCAGAGCTCTCTCCTaGAGGTTGTCCATTGTGACG +
Preference number: 4 (lower is better)
Translates to: MKTGLYMILYNQFPKQDACRALS*RLSIVT
Trigger: CGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCA...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGAAGGAGAGGCTACACATaGCAGAGACTAGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: EARANTNDQFTSMERTQRRRGYT*QRLEKH
Trigger: ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCT...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AAACAGTACAAAACCAGGTTGCATAAAGTGACCAAAGCTTTGGTCAAAGTTTTAATGGAATCCATGTCATaGTCGTTCTGGTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KQYKTRLHKVTKALVKVLMESMS*SFWSPA
Trigger: GGCTGGGGACCAGAACGACCATGACATGGATTCCAT...TAAAACTTTGACCAAAGCTTTGGTCACTTTATGCAACCTGGTTTTGTACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CCA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTGATGCTCCCAGATTCTaGACGCTTCCTTTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTDAPRF*TLPLLV
Trigger: AACAAGCAAAGGAAGCGTCCAGAATCTGGGAGCATC...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATGTCTTAAATGGAAAATaGTCCATCAGAGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHVLNGK*SIRDKG
Trigger: ACCTTTGTCTCTGATGGACCATTTTCCATTTAAGAC...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
3UTR CAA 72 bp CAGTACAAAACCAGGTTGCATAAAGTGACCAAAGCTTaGGTCAAAGTTTTAGCTGTAAGACTGCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: QYKTRLHKVTKA*VKVLAVRLPQR
Trigger: CCTTTGTGGCAGTCTTACAGCTAAAACTTTGACCAAAGCTTTGGTCACTTTATGCAACCTGGTTTTGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR TCA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGAAAGAGCAAACACCAATaGCCAATTCACATCAATGGA +
Preference number: 4 (lower is better)
Translates to: EARANTNDQFTSMERTQRKSKHQ*PIHING
Trigger: TCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTT...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR GCA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTTCTGGACGCTTCCTTTaGTTGTTGATGTTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTSGRFL*LLMFAR
Trigger: TCTTGCAAACATCAACAAGCAAAGGAAGCGTCCAGA...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCGGGTCCATGGGCCGATaGTTATTGAAGCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: MKTGLYMILYNQFPKQDAGSMGR*LLKLFD
Trigger: GTCAAAAAGCTTCAATAACCATCGGCCCATGGACCC...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CCA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATGGAAAATGTCTTAAATaGAAAATGGTCCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: RLVYDQERLHMPETRKTYGKCLK*KMVHQR
Trigger: TCTCTGATGGACCATTTTCCATTTAAGACATTTTCC...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624873.3
3UTR CAA 72 bp GAAATAAGGCAGGAGCAACAGAACAGGCCCAAAGTGTaGCCATTAAGAAAGCTTTGCTTTTACTTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: EIRQEQQNRPKV*PLRKLCFYFLR
Trigger: TCTAAGAAAGTAAAAGCAAAGCTTTCTTAATGGCAACACTTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573034.7
CDS-3UTR TCA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTTACCAGATTTCACAGTaGCCTGATAATGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTYQISQ*PDNENL
Trigger: CAGGTTTTCATTATCAGGTCACTGTGAAATCTGGTA...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS CCA 90 bp GGCCGGAAGGCGCAGGCGATGTCCCCAGCAGTACTGGCGCTGCGCTaGAAGGCGGGCTCGGGGTCCTTGAGGAGCTGGGTGTGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GRKAQAMSPAVLALR*KAGSGSLRSWVCRG
Trigger: CCCTCTGCACACCCAGCTCCTCAAGGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGTACTGCTGGGGACATCGCCTGCGCCTTCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CCA 90 bp GTACTGGCGCTGCGCTGGAAGGCGGGCTCGGGGTCCTTGAGGAGCTaGGTGTGCAGAGGGCTGGAGGGCTCTGACGTGGGGGCCACCACT +
Preference number: 5 (lower is better)
Translates to: VLALRWKAGSGSLRS*VCRGLEGSDVGATT
Trigger: AGTGGTGGCCCCCACGTCAGAGCCCTCCAGCCCTCTGCACACCCAGCTCCTCAAGGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS-3UTR CAA 90 bp GCTTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCGGAGCGCCCTGGGGCTaGTCATCCTGCTGGCACGGG +
Preference number: 5 (lower is better)
Translates to: ACHPAGTGPGFRAWRKEVGAPWG*SSCWHG
Trigger: CCCGTGCCAGCAGGATGACAAGCCCCAGGGCGCTCC...GACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CAA 90 bp GCGGCAGCACGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGCTCATTCACGTGGGCTaGGCAGGACACCTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: AAARRRRIPLDSQIGRGWLIHVG*AGHLVV
Trigger: CACGACCAGGTGTCCTGCCAAGCCCACGTGAATGAG...CCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCGTGCTGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CAA 90 bp ACAGTCAACTGTGTGGTGGCTCTGGAGACGGCGGCGTCGTGGCAGGACACCGCCCCTGTTTCCTCACAGTaGAGCTGCGCCTGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: TVNCVVALETAASWQDTAPVSSQ*SCAWLD
Trigger: GTCTAGCCAGGCGCAGCTCAACTGTGAGGAAACAGG...GGCGGTGTCCTGCCACGACGCCGCCGTCTCCAGAGCCACCACACAGTTGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CAA 90 bp CCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTCATTCACGTGGGCTaGGCAGGACACCTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: PLSSAGSSAPQESVARGHLIHVG*AGHLVV
Trigger: CACGACCAGGTGTCCTGCCAAGCCCACGTGAATGAG...GTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS CCA 90 bp TGCCCACTGATGGAACACTTATCTGGCCCTTCTTTGGGGAGGCTCTaGCTCATGATGGGCTGGGAGGATGGGCGGCAGCTAGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: CPLMEHLSGPSLGRL*LMMGWEDGRQLAPT
Trigger: GGTGGGGGCTAGCTGCCGCCCATCCTCCCAGCCCATCATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS-3UTR CAA 90 bp CACTGTCGTAGCGCCTCTAGCCCCGCTCAGAGCATCCAAGCCGGTCCCAGGTCTCCACCACCAGAGGAATaGCCTGGCTGGAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: HCRSASSPAQSIQAGPRSPPPEE*PGWSPV
Trigger: AACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTGG...AGACCTGGGACCGGCTTGGATGCTCTGAGCGGGGCTAGAGGCGCTACGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CAA 90 bp CTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCGTGGCTAGGGGACACCTGGCTCTCTCCTGCAGGTaGTCCATTGTGACGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSSAGSSAPQESVARGHLALSCR*SIVTQA
Trigger: GGCCTGCGTCACAATGGACAACCTGCAGGAGAGAGC...CAGGTGTCCCCTAGCCACGCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CAA 90 bp TTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCTGCTCATTCACGTGGGCTaGGCAGGACACCTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: LSSCWHGARFQGLAERGLLIHVG*AGHLVV
Trigger: CACGACCAGGTGTCCTGCCAAGCCCACGTGAATGAG...CAGACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CAA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGTGGCGGCTGATGGAGTaGAGGCTCCCGTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: GKGEAIPRASFSRFWETGWRLME*RLPCPL
Trigger: CAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCA...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp CTGGAGACGGCGGCGTCGTGGCAGGACACCGCCACACACTGTCGTAGCGCCTCTATAATCAGAGTGGTTTaGGGCAGGACTAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: LETAASWQDTATHCRSASIIRVV*GRTRRT
Trigger: AGTCCTCCTAGTCCTGCCCAAAACCACTCTGATTAT...AGAGGCGCTACGACAGTGTGTGGCGGTGTCCTGCCACGACGCCGCCGTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CAA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGACCGGGGCAGCCATCTaGACAGACTTGACAGGCCGG +
Preference number: 5 (lower is better)
Translates to: GKGEAIPRASFSRFWETGTGAAI*TDLTGR
Trigger: CCGGCCTGTCAAGTCTGTCAAGATGGCTGCCCCGGT...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCGGGAAGACAGTGGGCTaGGGCCGTGTGGCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPGKTVG*GRVAGG
Trigger: ACCACCAGCCACACGGCCCAAGCCCACTGTCTTCCC...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS TCA 90 bp GGCAGTCTTCCGGATCTGTGGACTATCCAGCCGATTCTTCAGGGATaGGTGGCGGCTGATGGAGTTGAGGCTCCCGTGCCCACTGATGGA +
Preference number: 5 (lower is better)
Translates to: GSLPDLWTIQPILQG*VAADGVEAPVPTDG
Trigger: TCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTGAAGAATCGGCTGGATAGTCCACAGATCCGGAAGACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CCA 90 bp GCTGATGGAGTTGAGGCTCCCGTGCCCACTGATGGAACACTTATCTaGCCCTTCTTTGGGGAGGCTCTGGCTCATGATGGGCTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: ADGVEAPVPTDGTLI*PFFGEALAHDGLGG
Trigger: TCCTCCCAGCCCATCATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CCA 90 bp AGCTGGGGACAGAGACAGGGCAAACGGACAGGGGGCAGGCTTGGGTaGGCCCACGGGACAACTGCTTCAAAGTGTGAGAATCAACCAACA +
Preference number: 5 (lower is better)
Translates to: SWGQRQGKRTGGRLG*AHGTTASKCENQPT
Trigger: TGTTGGTTGATTCTCACACTTTGAAGCAGTTGTCCCGTGGGCCCACCCAAGCCTGCCCCCTGTCCGTTTGCCCTGTCTCTGTCCCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604247.1
CDS-3UTR CAA 90 bp GAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGCTTATCTGGCCCTTCTTaGGGGAGGCTCTGGCTCATG +
Preference number: 5 (lower is better)
Translates to: ERYGLQLAELRRLGEAEGLSGPS*GRLWLM
Trigger: CATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAA...GCCCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGACCACTGGGGAGGTTTaGAGGGGCTCCAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQRTTGEV*RGSKVS
Trigger: GGACACCTTGGAGCCCCTCAAAACCTCCCCAGTGGT...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp GCTTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCACAGACTCTGAATCTTaGCACGAACACGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: ACHPAGTGPGFRAWRKEVTDSES*HEHGSR
Trigger: CCTTGACCCGTGTTCGTGCAAAGATTCAGAGTCTGT...GACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS GCA 90 bp CGATTCTTCAGGGATGAGTGGCGGCTGATGGAGTTGAGGCTCCCGTaGCCACTGATGGAACACTTATCTGGCCCTTCTTTGGGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: RFFRDEWRLMELRLP*PLMEHLSGPSLGRL
Trigger: GAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTGAAGAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CCA 90 bp GTCTTCCGGATCTGTGGACTATCCAGCCGATTCTTCAGGGATGAGTaGCGGCTGATGGAGTTGAGGCTCCCGTGCCCACTGATGGAACAC +
Preference number: 5 (lower is better)
Translates to: VFRICGLSSRFFRDE*RLMELRLPCPLMEH
Trigger: GTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTGAAGAATCGGCTGGATAGTCCACAGATCCGGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS-3UTR CAA 90 bp ACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTGGAGACCTGGACCAGCTCCCTGGGGCTaGGGAAGATGTTCTCATGCT +
Preference number: 5 (lower is better)
Translates to: THSKAPFHSTRAASWRPGPAPWG*GRCSHA
Trigger: AGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTGG...TCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGCCAGCTCCCTGGGGCTaGGGAAGATGTTCTCATGCT +
Preference number: 5 (lower is better)
Translates to: GKGEAIPRASFSRFWETGPAPWG*GRCSHA
Trigger: AGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTGG...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp ACACACAGTAAAGCACCCTTCCACAGCACGAGGGCAGCTAGCTGGAGACCTGGAACCTCAATCTCAGACTaGGGGCTGGACCTCTCCACG +
Preference number: 5 (lower is better)
Translates to: THSKAPFHSTRAASWRPGTSISD*GLDLST
Trigger: CGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGT...TCCAGGTCTCCAGCTAGCTGCCCTCGTGCTGTGGAAGGGTGCTTTACTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp CACTGTCGTAGCGCCTCTAGCCCCGCTCAGAGCATCCAAGCCGGTCCCAGGTCTGGATATCAACGTGTCTaGGACCACGATGTACTGATG +
Preference number: 5 (lower is better)
Translates to: HCRSASSPAQSIQAGPRSGYQRV*DHDVLM
Trigger: CATCAGTACATCGTGGTCCAAGACACGTTGATATCC...AGACCTGGGACCGGCTTGGATGCTCTGAGCGGGGCTAGAGGCGCTACGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS GCA 90 bp GGGAACTGCTCAGCCCATGGCTGTCACTCCGAAAAGTTTTCCGGATaGTCCCAGATTCTGGACGCTTCCTTTGCTTGGTGGTCACGGGCT +
Preference number: 5 (lower is better)
Translates to: GNCSAHGCHSEKFSG*SQILDASFAWWSRA
Trigger: AGCCCGTGACCACCAAGCAAAGGAAGCGTCCAGAATCTGGGAGCATCCGGAAAACTTTTCGGAGTGACAGCCATGGGCTGAGCAGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604010.1
CDS GCA 90 bp AGGGAGGATTTCCCTGCAGAACGAGCCGGGAAGAGGCTGGGAGGGTaGAGACTCACTCAGGATATCAACGTGTCTTGGACCACGATGTAC +
Preference number: 5 (lower is better)
Translates to: REDFPAERAGKRLGG*RLTQDINVSWTTMY
Trigger: GTACATCGTGGTCCAAGACACGTTGATATCCTGAGTGAGTCTGCACCCTCCCAGCCTCTTCCCGGCTCGTTCTGCAGGGAAATCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS CCA 90 bp AAACACACAGGACGAACGTGGGGAAGGGGTGAACCATGCATGTCCTaGTCCCAATCCATCAGCTTTCTGCCCGGCATGGTGGCCATGAGT +
Preference number: 5 (lower is better)
Translates to: KHTGRTWGRGEPCMS*SQSISFLPGMVAMS
Trigger: ACTCATGGCCACCATGCCGGGCAGAAAGCTGATGGATTGGGACCAGGACATGCATGGTTCACCCCTTCCCCACGTTCGTCCTGTGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS-3UTR CAA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGACCGTCCTCGGTGTCTaGGACCACGATGTACTGATG +
Preference number: 5 (lower is better)
Translates to: GKGEAIPRASFSRFWETGTVLGV*DHDVLM
Trigger: CATCAGTACATCGTGGTCCAAGACACCGAGGACGGT...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGGGGGAAGTTGATGAGTaGACACCAGGGCTAGTGGCA +
Preference number: 5 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQRGEVDE*TPGLVA
Trigger: TGCCACTAGCCCTGGTGTCAACTCATCAACTTCCCC...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp TTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACCTGTCCACGCACAGATaGCCACCAGGTTTGCGATGC +
Preference number: 5 (lower is better)
Translates to: LGGSCPRTDCHQVCDAINLSTHR*PPGLRC
Trigger: GCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAG...GTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS TCA 90 bp AGGGGGCAGGCTTGGGTGGGCCCACGGGACAACTGCTTCAAAGTGTaGGAATCAACCAACAGCCTATCAGATGAGATCTCTCTGGGACCA +
Preference number: 5 (lower is better)
Translates to: RGQAWVGPRDNCFKV*ESTNSLSDEISLGP
Trigger: TGGTCCCAGAGAGATCTCATCTGATAGGCTGTTGGTTGATTCTCACACTTTGAAGCAGTTGTCCCGTGGGCCCACCCAAGCCTGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604247.1
CDS-3UTR CAA 90 bp CTCAGGACAAAGCTTTCCTTAGGGACATCGTGGCCTCCTTTCCTCCACAGGAGTCCTGTTTCCTCACAGTaGAGCTGCGCCTGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: LRTKLSLGTSWPPFLHRSPVSSQ*SCAWLD
Trigger: GTCTAGCCAGGCGCAGCTCAACTGTGAGGAAACAGG...ACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAGCTTTGTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp AGTTTTAGCTGTAAGACTGCCACAAAGGTCTGGGTGGACAGACACTGCGGGAACGCTCTCTCCTGCAGGTaGTCCATTGTGACGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SFSCKTATKVWVDRHCGNALSCR*SIVTQA
Trigger: GGCCTGCGTCACAATGGACAACCTGCAGGAGAGAGC...GTTCCCGCAGTGTCTGTCCACCCAGACCTTTGTGGCAGTCTTACAGCTAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp CATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGACCTCAATCTCAGACTaGGGGCTGGACCTCTCCACG +
Preference number: 5 (lower is better)
Translates to: HHLQSIFIRSALGLVILLTSISD*GLDLST
Trigger: CGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGT...CAGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CAA 90 bp GCTTGTCATCCTGCTGGCACGGGGCCAGGTTTCAGGGCCTGGCGGAAAGAGGTCCAGTACAAAACCAGGTaGCATAAAGTGACCAAAGCT +
Preference number: 5 (lower is better)
Translates to: ACHPAGTGPGFRAWRKEVQYKTR*HKVTKA
Trigger: AGCTTTGGTCACTTTATGCAACCTGGTTTTGTACTG...GACCTCTTTCCGCCAGGCCCTGAAACCTGGCCCCGTGCCAGCAGGATGACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS CCA 90 bp AGCACGGCAGATGAGTCCACCAATATAAACTCTCTTGTGCCAGCCTaGCTCAGGGACATTCCCTATGGGCTGAGGATGGGACACAGCAAC +
Preference number: 5 (lower is better)
Translates to: STADESTNINSLVPA*LRDIPYGLRMGHSN
Trigger: GTTGCTGTGTCCCATCCTCAGCCCATAGGGAATGTCCCTGAGCCAGGCTGGCACAAGAGAGTTTATATTGGTGGACTCATCTGCCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS-3UTR CAA 90 bp ACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTCCAGCTCCCTGGGGCTaGGGAAGATGTTCTCATGCT +
Preference number: 5 (lower is better)
Translates to: TSSPIHIHQERPGACHPAPAPWG*GRCSHA
Trigger: AGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTGG...AGCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CAA 90 bp CAGGATGTTGCTAACAGCCACAATGAAAGCTGGGGGTCAGAGGTAAGAGCCTGCTGTAGGCTTTGGGACTaGGTGTCTGGCCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: QDVANSHNESWGSEVRACCRLWD*VSGPLR
Trigger: TCTCAAGGGGCCAGACACCAAGTCCCAAAGCCTACA...GCAGGCTCTTACCTCTGACCCCCAGCTTTCATTGTGGCTGTTAGCAACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS TCA 90 bp ACATTCGTCATCGCTCGTGTGGTGCTCTGCGGTCACATCCTGGGTTaGGTCTTCAACCGAGGTAGTCTCTCCATGAGGGCTATCACAGTA +
Preference number: 5 (lower is better)
Translates to: TFVIARVVLCGHILG*VFNRGSLSMRAITV
Trigger: TACTGTGATAGCCCTCATGGAGAGACTACCTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGAGCACCACACGAGCGATGACGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604925.5
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS TCA 90 bp AGCAATGACCTCAGGGTCCATGGGCCGATGGTTATTGAAGCTTTTTaGCCTTCCCGCTGTGGCAGTCTTCCGGATCTGTGGACTATCCAG +
Preference number: 5 (lower is better)
Translates to: SNDLRVHGPMVIEAF*PSRCGSLPDLWTIQ
Trigger: CTGGATAGTCCACAGATCCGGAAGACTGCCACAGCGGGAAGGTCAAAAAGCTTCAATAACCATCGGCCCATGGACCCTGAGGTCATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS TCA 90 bp AAAGACTGCTCCATTTCAGGGGCTCCAGGACCAAAGCACGGCAGATaGGTCCACCAATATAAACTCTCTTGTGCCAGCCTGGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: KDCSISGAPGPKHGR*VHQYKLSCASLAQG
Trigger: TCCCTGAGCCAGGCTGGCACAAGAGAGTTTATATTGGTGGACTCATCTGCCGTGCTTTGGTCCTGGAGCCCCTGAAATGGAGCAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS GCA 90 bp ATAATCAGAGTGGTTTTGGGCAGGACTAGGAGGACTTTCCGGATGTaGAGAGCTCTCTCCTGCAGGTTGTCCATTGTGACGCAGGCCATC +
Preference number: 5 (lower is better)
Translates to: IIRVVLGRTRRTFRM*RALSCRLSIVTQAI
Trigger: GATGGCCTGCGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCACATCCGGAAAGTCCTCCTAGTCCTGCCCAAAACCACTCTGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604419.1
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS GCA 90 bp TCCAAGGTGTCCAGAACCACGTCAGGGGTGTGTTTGACACTGCTCTaGCGTTCTAGTTCCCGTAGCTCATTCAGGGCCGAGTTCATTGTT +
Preference number: 5 (lower is better)
Translates to: SKVSRTTSGVCLTLL*RSSSRSSFRAEFIV
Trigger: AACAATGAACTCGGCCCTGAATGAGCTACGGGAACTAGAACGGCAGAGCAGTGTCAAACACACCCCTGACGTGGTTCTGGACACCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CCA 90 bp GCACGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTaGAGTTTAAACCCCAGGATGTTGCTAACAGCCACAATGAAAGTT +
Preference number: 5 (lower is better)
Translates to: ARRRRIPLDSQIGRG*SLNPRMLLTATMKV
Trigger: AACTTTCATTGTGGCTGTTAGCAACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604925.5
CDS-3UTR CAA 90 bp GGGTTAGGCCAGAGGGTGAGGCTGGGTGTTGCAAGTCATTCAGGGGAGCAGAAATGCAGAAGGTCATGCTaGGCTTGTAACTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: GLGQRVRLGVASHSGEQKCRRSC*ACNLVM
Trigger: CATCACCAAGTTACAAGCCAAGCATGACCTTCTGCA...TTTCTGCTCCCCTGAATGACTTGCAACACCCAGCCTCACCCTCTGGCCTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp GGGAAGGGAGAGGCGATACCAAGGGCTTCATTCTCAAGGTTTTGGGAGACGGGGATAATCAGAGTGGTTTaGGGCAGGACTAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: GKGEAIPRASFSRFWETGIIRVV*GRTRRT
Trigger: AGTCCTCCTAGTCCTGCCCAAAACCACTCTGATTAT...CCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp GTACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGACCGTCCTCGGTGTCTaGGACCACGATGTACTGATG +
Preference number: 5 (lower is better)
Translates to: VHHLQSIFIRSALGLVILTVLGV*DHDVLM
Trigger: CATCAGTACATCGTGGTCCAAGACACCGAGGACGGT...CAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CAA 90 bp GAACACAGAGAGAAAGCCCCCAACCCCAAACAGGTTACGGGATTGTCCCATCCCGGGCCGAGTTCATTGTaGCCTCAATATCCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: EHREKAPNPKQVTGLSHPGPSSL*PQYPEQ
Trigger: TTGCTCAGGATATTGAGGCAACAATGAACTCGGCCC...GGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp TACATCATCTCCAATCCATATTCATCAGGAGCGCCCTGGGGCTTGTCATCCTGCTGTAGGCTTTGGGACTaGGTGTCTGGCCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: YIISNPYSSGAPWGLSSCCRLWD*VSGPLR
Trigger: TCTCAAGGGGCCAGACACCAAGTCCCAAAGCCTACA...GCAGGATGACAAGCCCCAGGGCGCTCCTGATGAATATGGATTGGAGATGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CAA 90 bp TTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCAACTGCAGAAGGTCATGCTaGGCTTGTAACTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: LGGSCPRTDCHQVCDAINCRRSC*ACNLVM
Trigger: CATCACCAAGTTACAAGCCAAGCATGACCTTCTGCA...GTTGATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CAA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATGCCATCTTGACAGACTaGACAGGCCGGAAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHAILTD*TGRKAQ
Trigger: CTGCGCCTTCCGGCCTGTCAAGTCTGTCAAGATGGC...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp AAGAACGGTACGGACTGCAGCTGGCTGAATTACGACGACTGGGGGAAGCAGAGGAAACAGGTTACGGGATaGTCCCATCCCGTTATGTTT +
Preference number: 5 (lower is better)
Translates to: KNGTDCSWLNYDDWGKQRKQVTG*SHPVMF
Trigger: AAACATAACGGGATGGGACAATCCCGTAACCTGTTT...CCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp AAATTTGGGAGGGTCCTGTCCACGCACAGATTGCCACCAGGTTTGCGATGCTATCTCCGTGTACTTGGCTaGACGCTTCTCCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: KFGRVLSTHRLPPGLRCYLRVLG*TLLLHL
Trigger: AAGATGAAGGAGAAGCGTCAAGCCAAGTACACGGAG...ATAGCATCGCAAACCTGGTGGCAATCTGTGCGTGGACAGGACCCTCCCAAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CAA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAACCTGTTTCCTCACAGTaGAGCTGCGCCTGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: METETPGGYCVNCHNNLQPVSSQ*SCAWLD
Trigger: GTCTAGCCAGGCGCAGCTCAACTGTGAGGAAACAGG...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp CTTTCCTTAGGGACATCGTGGCCTCCTTTCCTCCACAGGAGTGAATGCAGGACAATAATCAGAGTGGTTTaGGGCAGGACTAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: LSLGTSWPPFLHRSECRTIIRVV*GRTRRT
Trigger: AGTCCTCCTAGTCCTGCCCAAAACCACTCTGATTAT...TGTCCTGCATTCACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp ATAAAAATAAATAATCCGCTGAGTTCTGCGGGCTCCTCAGCTCCTCAGGAAAGCCCAGCTCCCTGGGGCTaGGGAAGATGTTCTCATGCT +
Preference number: 5 (lower is better)
Translates to: IKINNPLSSAGSSAPQESPAPWG*GRCSHA
Trigger: AGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTGG...GCTTTCCTGAGGAGCTGAGGAGCCCGCAGAACTCAGCGGATTATTTATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS-3UTR CAA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCCGTGTGGCTGGTGGTTaGACCGGGGCAGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFRVAGG*TGAAIL
Trigger: CAAGATGGCTGCCCCGGTCAAACCACCAGCCACACG...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp CGCAGGCGTAGAATCCCTCTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACTTAAACCCCAGGATGTaGCTAACAGCCACAATGAAA +
Preference number: 5 (lower is better)
Translates to: RRRRIPLDSQIGRGWSLNLNPRM*LTATMK
Trigger: TTTCATTGTGGCTGTTAGCAACATCCTGGGGTTTAA...GTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAGAGGGATTCTACGCCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604925.5
ENST00000605476.5
CDS-3UTR CAA 90 bp AGGTCTGGGTGGACAGACACTGCGGGAACACACAGTAAAGCACCCTTCCACAGCTTAAACCCCAGGATGTaGCTAACAGCCACAATGAAA +
Preference number: 5 (lower is better)
Translates to: RSGWTDTAGTHSKAPFHSLNPRM*LTATMK
Trigger: TTTCATTGTGGCTGTTAGCAACATCCTGGGGTTTAA...GCTGTGGAAGGGTGCTTTACTGTGTGTTCCCGCAGTGTCTGTCCACCCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp TTCCAGTCTCAGTGTCCAGAGGCTACGGTTAACAGGTTTTCAAAGTGCAAATCACCACCACCAGAGGAATaGCCTGGCTGGAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: FQSQCPEATVNRFSKCKSPPPEE*PGWSPV
Trigger: AACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTGG...TGATTTGCACTTTGAAAACCTGTTAACCGTAGCCTCTGGACACTGAGACTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp GAGGCAAGAGCAAACACCAATGACCAATTCACATCAATGGAAAGAACACAGAGAGCTCTCTCCTGCAGGTaGTCCATTGTGACGCAGGCC +
Preference number: 5 (lower is better)
Translates to: EARANTNDQFTSMERTQRALSCR*SIVTQA
Trigger: GGCCTGCGTCACAATGGACAACCTGCAGGAGAGAGC...TCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATACGTCAGGGGTGTGTTaGACACTGCTCTGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHTSGVC*TLLCRS
Trigger: AGAACGGCAGAGCAGTGTCAAACACACCCCTGACGT...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS CCA 90 bp CAATATAAACTCTCTTGTGCCAGCCTGGCTCAGGGACATTCCCTATaGGCTGAGGATGGGACACAGCAACTGTATCTCACAAGAATCATG +
Preference number: 5 (lower is better)
Translates to: QYKLSCASLAQGHSL*AEDGTQQLYLTRIM
Trigger: CATGATTCTTGTGAGATACAGTTGCTGTGTCCCATCCTCAGCCCATAGGGAATGTCCCTGAGCCAGGCTGGCACAAGAGAGTTTATATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS-3UTR CAA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATGGGCCGATGGTTATaGAAGCTTTTTGACCTTCCC +
Preference number: 5 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHMGRWL*KLFDLP
Trigger: GGGAAGGTCAAAAAGCTTCAATAACCATCGGCCCAT...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp AGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATATTCAGGGCCGAGTTCATaGTTGCCTCAATATCCTGAG +
Preference number: 5 (lower is better)
Translates to: RLVYDQERLHMPETRKTYSGPSS*LPQYPE
Trigger: CTCAGGATATTGAGGCAACAATGAACTCGGCCCTGA...ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp AGAGACTGGTCTATGACCAGGAGAGGCTACACATGCCAGAGACTAGAAAAACATCAGACAGTACAAGACTaGTCAGTAGACTGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: RDWSMTRRGYTCQRLEKHQTVQD*SVDCGE
Trigger: TTCCCCACAGTCTACTGACAAGTCTTGTACTGTCTG...ATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp GGAAAATGGTCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCCTTTCGATTCTGGCCTaGGGAAGACTTGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GKWSIRDKGRNPRNVYTFLSILA*GRLESL
Trigger: CAGGCTCTCAAGTCTTCCCAAGGCCAGAATCGAAAG...GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp CTCAGGACAAAGCTTTCCTTAGGGACATCGTGGCCTCCTTTCCTCCACAGGAGTAAAGTGACCAAAGCTTaGGTCAAAGTTTTAGCTGTA +
Preference number: 5 (lower is better)
Translates to: LRTKLSLGTSWPPFLHRSKVTKA*VKVLAV
Trigger: TACAGCTAAAACTTTGACCAAAGCTTTGGTCACTTT...ACTCCTGTGGAGGAAAGGAGGCCACGATGTCCCTAAGGAAAGCTTTGTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605476.5
CDS-3UTR CAA 90 bp TCTAAGCCCCTGTTGGTCCCTGAAGAGAGACCTTGTAAAATAAGGAAACTAAGGTGCAGAAGGTCATGCTaGGCTTGTAACTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: SKPLLVPEERPCKIRKLRCRRSC*ACNLVM
Trigger: CATCACCAAGTTACAAGCCAAGCATGACCTTCTGCA...CCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCCTCATTCACGTGGGCTaGGCAGGACACCTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: MKTGLYMILYNQFPKQDALIHVG*AGHLVV
Trigger: CACGACCAGGTGTCCTGCCAAGCCCACGTGAATGAG...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTCTCTCTAAGCCCCTGTaGGTCCCTGAAGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTLSKPL*VPEERP
Trigger: AGGTCTCTCTTCAGGGACCAACAGGGGCTTAGAGAG...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS CCA 90 bp TCAAAGTGTGAGAATCAACCAACAGCCTATCAGATGAGATCTCTCTaGGACCAGTTCAGGTTTCCTTTGTTCCTTGACATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: SKCENQPTAYQMRSL*DQFRFPLFLDILFP
Trigger: AGGGAAAAGGATGTCAAGGAACAAAGGAAACCTGAACTGGTCCCAGAGAGATCTCATCTGATAGGCTGTTGGTTGATTCTCACACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604247.1
CDS-3UTR CAA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCCCACCACCAGAGGAATaGCCTGGCTGGAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: MKTGLYMILYNQFPKQDAPPPEE*PGWSPV
Trigger: AACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTGG...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp ATGAAGACTGGACTATATATGATTCTCTATAATCAGTTCCCAAAACAAGATGCCACCTCAATCTCAGACTaGGGGCTGGACCTCTCCACG +
Preference number: 5 (lower is better)
Translates to: MKTGLYMILYNQFPKQDATSISD*GLDLST
Trigger: CGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGT...GGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS TCA 90 bp GCCAGTGGCCTATTGTTTACAAAAACAAGCCTGGATTATGAACAGTaGCAAGAGGCCAAGACCTCAATAATAACTCACAACCACACCTCT +
Preference number: 5 (lower is better)
Translates to: ASGLLFTKTSLDYEQ*QEAKTSIITHNHTS
Trigger: AGAGGTGTGGTTGTGAGTTATTATTGAGGTCTTGGCCTCTTGTCACTGTTCATAATCCAGGCTTGTTTTTGTAAACAATAGGCCACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624686.1
CDS TCA 90 bp CATGGAGGCCAGTGGCCTATTGTTTACAAAAACAAGCCTGGATTATaGACAGTGACAAGAGGCCAAGACCTCAATAATAACTCACAACCA +
Preference number: 5 (lower is better)
Translates to: HGGQWPIVYKNKPGL*TVTRGQDLNNNSQP
Trigger: TGGTTGTGAGTTATTATTGAGGTCTTGGCCTCTTGTCACTGTTCATAATCCAGGCTTGTTTTTGTAAACAATAGGCCACTGGCCTCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624686.1
CDS-3UTR CAA 90 bp TCCATCAGAGACAAAGGTAGGAACCCGAGAAATGTCTATACATTCAGAAAAACTCTCCGTGTACTTGGCTaGACGCTTCTCCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: SIRDKGRNPRNVYTFRKTLRVLG*TLLLHL
Trigger: AAGATGAAGGAGAAGCGTCAAGCCAAGTACACGGAG...AGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS-3UTR CAA 90 bp ATGGAAACAGAGACCCCTGGTGGCTACTGTGTGAACTGCCACAATAACTTACAAGTCCCTATAGTCCCCTaGTCTAGAACAATTAAATTA +
Preference number: 5 (lower is better)
Translates to: METETPGGYCVNCHNNLQVPIVP*SRTIKL
Trigger: TAATTTAATTGTTCTAGACAAGGGGACTATAGGGAC...TTGTAAGTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624873.3
CDS CCA 72 bp GCGCAGGCGATGTCCCCAGCAGTACTGGCGCTGCGCTaGAAGGCGGGCTCGGGGTCCTTGAGGAGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: AQAMSPAVLALR*KAGSGSLRSWV
Trigger: CACCCAGCTCCTCAAGGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGTACTGCTGGGGACATCGCCTGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CAA 90 bp GGCCGTGTGGCTGGTGGTTTGACCGGGGCAGCCATCTTGACAGACTaGACAGGCCGGAAGGCGCAGGCGATGTCCCCAGCAGTACTGGCG +
Preference number: 6 (lower is better)
Translates to: GRVAGGLTGAAILTD*TGRKAQAMSPAVLA
Trigger: CGCCAGTACTGCTGGGGACATCGCCTGCGCCTTCCGGCCTGTCAAGTCTGTCAAGATGGCTGCCCCGGTCAAACCACCAGCCACACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CAA 90 bp GTGGGCTTGGGCCGTGTGGCTGGTGGTTTGACCGGGGCAGCCATCTaGACAGACTTGACAGGCCGGAAGGCGCAGGCGATGTCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: VGLGRVAGGLTGAAI*TDLTGRKAQAMSPA
Trigger: TGCTGGGGACATCGCCTGCGCCTTCCGGCCTGTCAAGTCTGTCAAGATGGCTGCCCCGGTCAAACCACCAGCCACACGGCCCAAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CAA 72 bp GGCCGTGTGGCTGGTGGTTTGACCGGGGCAGCCATCTaGACAGACTTGACAGGCCGGAAGGCGCAGGCGATG +
Preference number: 6 (lower is better)
Translates to: GRVAGGLTGAAI*TDLTGRKAQAM
Trigger: CATCGCCTGCGCCTTCCGGCCTGTCAAGTCTGTCAAGATGGCTGCCCCGGTCAAACCACCAGCCACACGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CAA 72 bp GCTGGTGGTTTGACCGGGGCAGCCATCTTGACAGACTaGACAGGCCGGAAGGCGCAGGCGATGTCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: AGGLTGAAILTD*TGRKAQAMSPA
Trigger: TGCTGGGGACATCGCCTGCGCCTTCCGGCCTGTCAAGTCTGTCAAGATGGCTGCCCCGGTCAAACCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CAA 72 bp GGGGACAGAGACAGGGCAAACGGACAGGGGGCAGGCTaGGGTGGGCCCACGGGACAACTGCTTCAAAGTGTG +
Preference number: 6 (lower is better)
Translates to: GDRDRANGQGAG*GGPTGQLLQSV
Trigger: CACACTTTGAAGCAGTTGTCCCGTGGGCCCACCCAAGCCTGCCCCCTGTCCGTTTGCCCTGTCTCTGTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604247.1
CDS CAA 72 bp GGGAAGACAGTGGGCTTGGGCCGTGTGGCTGGTGGTTaGACCGGGGCAGCCATCTTGACAGACTTGACAGGC +
Preference number: 6 (lower is better)
Translates to: GKTVGLGRVAGG*TGAAILTDLTG
Trigger: GCCTGTCAAGTCTGTCAAGATGGCTGCCCCGGTCAAACCACCAGCCACACGGCCCAAGCCCACTGTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CAA 90 bp TTGAGGCTCCCGTGCCCACTGATGGAACACTTATCTGGCCCTTCTTaGGGGAGGCTCTGGCTCATGATGGGCTGGGAGGATGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: LRLPCPLMEHLSGPS*GRLWLMMGWEDGRQ
Trigger: CTGCCGCCCATCCTCCCAGCCCATCATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS TCA 72 bp CCGGATCTGTGGACTATCCAGCCGATTCTTCAGGGATaGGTGGCGGCTGATGGAGTTGAGGCTCCCGTGCCC +
Preference number: 6 (lower is better)
Translates to: PDLWTIQPILQG*VAADGVEAPVP
Trigger: GGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTGAAGAATCGGCTGGATAGTCCACAGATCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CCA 72 bp TTGATCAGCTCATTCACGTGGGCTTGGCAGGACACCTaGTCGTGGCCCTCTGGCACTGACATTAGCGAGGGC +
Preference number: 6 (lower is better)
Translates to: LISSFTWAWQDT*SWPSGTDISEG
Trigger: GCCCTCGCTAATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTGCCAAGCCCACGTGAATGAGCTGATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604925.5
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS CCA 72 bp TTTGGGGAAGACAGTGGGCTTGGGCCGTGTGGCTGGTaGTTTGACCGGGGCAGCCATCTTGACAGACTTGAC +
Preference number: 6 (lower is better)
Translates to: FGEDSGLGPCGW*FDRGSHLDRLD
Trigger: GTCAAGTCTGTCAAGATGGCTGCCCCGGTCAAACCACCAGCCACACGGCCCAAGCCCACTGTCTTCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CCA 72 bp GGACGAACGTGGGGAAGGGGTGAACCATGCATGTCCTaGTCCCAATCCATCAGCTTTCTGCCCGGCATGGTG +
Preference number: 6 (lower is better)
Translates to: GRTWGRGEPCMS*SQSISFLPGMV
Trigger: CACCATGCCGGGCAGAAAGCTGATGGATTGGGACCAGGACATGCATGGTTCACCCCTTCCCCACGTTCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS CCA 72 bp CAGAGACAGGGCAAACGGACAGGGGGCAGGCTTGGGTaGGCCCACGGGACAACTGCTTCAAAGTGTGAGAAT +
Preference number: 6 (lower is better)
Translates to: QRQGKRTGGRLG*AHGTTASKCEN
Trigger: ATTCTCACACTTTGAAGCAGTTGTCCCGTGGGCCCACCCAAGCCTGCCCCCTGTCCGTTTGCCCTGTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604247.1
CDS GCA 72 bp GCCTCGATGGGCTCACATTCGTCATCGCTCGTGTGGTaGTCTGCGGTCACATCCTGGGTTGAGTCTTCAACC +
Preference number: 6 (lower is better)
Translates to: ASMGSHSSSLVW*SAVTSWVESST
Trigger: GGTTGAAGACTCAACCCAGGATGTGACCGCAGAGCACCACACGAGCGATGACGAATGTGAGCCCATCGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604925.5
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS GCA 72 bp TTCCCTGCAGAACGAGCCGGGAAGAGGCTGGGAGGGTaGAGACTCACTCAGGATATCAACGTGTCTTGGACC +
Preference number: 6 (lower is better)
Translates to: FPAERAGKRLGG*RLTQDINVSWT
Trigger: GGTCCAAGACACGTTGATATCCTGAGTGAGTCTGCACCCTCCCAGCCTCTTCCCGGCTCGTTCTGCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605610.5
CDS CCA 72 bp GTTGAGGCTCCCGTGCCCACTGATGGAACACTTATCTaGCCCTTCTTTGGGGAGGCTCTGGCTCATGATGGG +
Preference number: 6 (lower is better)
Translates to: VEAPVPTDGTLI*PFFGEALAHDG
Trigger: CCCATCATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CCA 72 bp ATCTGTGGACTATCCAGCCGATTCTTCAGGGATGAGTaGCGGCTGATGGAGTTGAGGCTCCCGTGCCCACTG +
Preference number: 6 (lower is better)
Translates to: ICGLSSRFFRDE*RLMELRLPCPL
Trigger: CAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTGAAGAATCGGCTGGATAGTCCACAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CAA 90 bp GGACTATCCAGCCGATTCTTCAGGGATGAGTGGCGGCTGATGGAGTaGAGGCTCCCGTGCCCACTGATGGAACACTTATCTGGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: GLSSRFFRDEWRLME*RLPCPLMEHLSGPS
Trigger: AGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTGAAGAATCGGCTGGATAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS TCA 72 bp ATCGCTCGTGTGGTGCTCTGCGGTCACATCCTGGGTTaGGTCTTCAACCGAGGTAGTCTCTCCATGAGGGCT +
Preference number: 6 (lower is better)
Translates to: IARVVLCGHILG*VFNRGSLSMRA
Trigger: AGCCCTCATGGAGAGACTACCTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGAGCACCACACGAGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604925.5
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS GCA 72 bp AGGGATGAGTGGCGGCTGATGGAGTTGAGGCTCCCGTaGCCACTGATGGAACACTTATCTGGCCCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: RDEWRLMELRLP*PLMEHLSGPSL
Trigger: CAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS GCA 72 bp TCCAGAACCACGTCAGGGGTGTGTTTGACACTGCTCTaGCGTTCTAGTTCCCGTAGCTCATTCAGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: SRTTSGVCLTLL*RSSSRSSFRAE
Trigger: CTCGGCCCTGAATGAGCTACGGGAACTAGAACGGCAGAGCAGTGTCAAACACACCCCTGACGTGGTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CCA 72 bp CCAGCCCCCGGAAGTAAAGCTTCAGGACACCAGCTATaGAATCCATGTCATGGTCGTTCTGGTCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: PAPGSKASGHQL*NPCHGRSGPQP
Trigger: TGGCTGGGGACCAGAACGACCATGACATGGATTCCATAGCTGGTGTCCTGAAGCTTTACTTCCGGGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604419.1
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS CCA 72 bp ATGGCCTCGATGGGCTCACATTCGTCATCGCTCGTGTaGTGCTCTGCGGTCACATCCTGGGTTGAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: MASMGSHSSSLV*CSAVTSWVESS
Trigger: TGAAGACTCAACCCAGGATGTGACCGCAGAGCACCACACGAGCGATGACGAATGTGAGCCCATCGAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604925.5
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS CCA 72 bp AGGACACCAGCTATGGAATCCATGTCATGGTCGTTCTaGTCCCCAGCCAGGGGGTCCTCTCCTGAGGATAAG +
Preference number: 6 (lower is better)
Translates to: RTPAMESMSWSF*SPARGSSPEDK
Trigger: CTTATCCTCAGGAGAGGACCCCCTGGCTGGGGACCAGAACGACCATGACATGGATTCCATAGCTGGTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS CAA 72 bp TCTTCAGGTGGCTCAGAAATGACCTCAATCTCAGACTaGGGGCTGGACCTCTCCACGACACCGTCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: SSGGSEMTSISD*GLDLSTTPSSV
Trigger: CACCGAGGACGGTGTCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000604925.5
ENST00000605476.5
ENST00000624873.3
CDS CAA 72 bp TCTTCAGGTGGCTCAGAAATGACCTCAATCTCAGACTaGGGGCTGGACCTCTCCACGACACCGTCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: SSGGSEMTSISD*GLDLSTTPSSL
Trigger: CAGCGAGGACGGTGTCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604247.1
CDS CAA 90 bp TGTGGGGAAGTTGATGAGTTGACACCAGGGCTAGTGGCATTTGTTTaGGGGAAGACAGTGGGCTTGGGCCGTGTGGCTGGTGGTTTGACC +
Preference number: 6 (lower is better)
Translates to: CGEVDELTPGLVAFV*GKTVGLGRVAGGLT
Trigger: GGTCAAACCACCAGCCACACGGCCCAAGCCCACTGTCTTCCCCAAAACAAATGCCACTAGCCCTGGTGTCAACTCATCAACTTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS TCA 72 bp CTCAGGGTCCATGGGCCGATGGTTATTGAAGCTTTTTaGCCTTCCCGCTGTGGCAGTCTTCCGGATCTGTGG +
Preference number: 6 (lower is better)
Translates to: LRVHGPMVIEAF*PSRCGSLPDLW
Trigger: CCACAGATCCGGAAGACTGCCACAGCGGGAAGGTCAAAAAGCTTCAATAACCATCGGCCCATGGACCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS GCA 72 bp GTGGTTTTGGGCAGGACTAGGAGGACTTTCCGGATGTaGAGAGCTCTCTCCTGCAGGTTGTCCATTGTGACG +
Preference number: 6 (lower is better)
Translates to: VVLGRTRRTFRM*RALSCRLSIVT
Trigger: CGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCACATCCGGAAAGTCCTCCTAGTCCTGCCCAAAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604419.1
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS GCA 72 bp AAACACACAGGACGAACGTGGGGAAGGGGTGAACCATaGATGTCCTGGTCCCAATCCATCAGCTTTCTGCCC +
Preference number: 6 (lower is better)
Translates to: KHTGRTWGRGEP*MSWSQSISFLP
Trigger: GGGCAGAAAGCTGATGGATTGGGACCAGGACATGCATGGTTCACCCCTTCCCCACGTTCGTCCTGTGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS CAA 72 bp AGCCGATTCTTCAGGGATGAGTGGCGGCTGATGGAGTaGAGGCTCCCGTGCCCACTGATGGAACACTTATCT +
Preference number: 6 (lower is better)
Translates to: SRFFRDEWRLME*RLPCPLMEHLS
Trigger: AGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTGAAGAATCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000624873.3
CDS CAA 72 bp GTTGATGAGTTGACACCAGGGCTAGTGGCATTTGTTTaGGGGAAGACAGTGGGCTTGGGCCGTGTGGCTGGT +
Preference number: 6 (lower is better)
Translates to: VDELTPGLVAFV*GKTVGLGRVAG
Trigger: ACCAGCCACACGGCCCAAGCCCACTGTCTTCCCCAAAACAAATGCCACTAGCCCTGGTGTCAACTCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS TCA 72 bp CCCAATCCATCAGCTTTCTGCCCGGCATGGTGGCCATaGGTGGGACAGACCAGGGAACAGATAAAGCAAAGA +
Preference number: 6 (lower is better)
Translates to: PNPSAFCPAWWP*VGQTREQIKQR
Trigger: TCTTTGCTTTATCTGTTCCCTGGTCTGTCCCACTCATGGCCACCATGCCGGGCAGAAAGCTGATGGATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS GCA 72 bp TCAGCCCATGGCTGTCACTCCGAAAAGTTTTCCGGATaGTCCCAGATTCTGGACGCTTCCTTTGCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: SAHGCHSEKFSG*SQILDASFAWW
Trigger: CCACCAAGCAAAGGAAGCGTCCAGAATCTGGGAGCATCCGGAAAACTTTTCGGAGTGACAGCCATGGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604010.1
CDS CCA 72 bp TGTTTGCAAGATAAATATCGGCTACATGACCCCCACTaGGACAGCTGGCCCCCGCTCTGGCTGTCACCTTTT +
Preference number: 6 (lower is better)
Translates to: CLQDKYRLHDPH*DSWPPLWLSPF
Trigger: AAAAGGTGACAGCCAGAGCGGGGGCCAGCTGTCCCAGTGGGGGTCATGTAGCCGATATTTATCTTGCAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000604247.1
ENST00000604925.5
ENST00000605476.5
ENST00000624873.3
CDS TCA 72 bp CTCTGGCTGTCACCTTTTCTTCAGGTGGCTCAGAAATaGCCTCAATCTCAGACTTGGGGCTGGACCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LWLSPFLQVAQK*PQSQTWGWTSP
Trigger: TGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTGAAGAAAAGGTGACAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000573034.8
ENST00000604010.1
ENST00000604247.1
ENST00000604925.5
ENST00000605476.5
ENST00000624873.3
CDS TCA 72 bp TTGTGCCAGCCTGGCTCAGGGACATTCCCTATGGGCTaGGGATGGGACACAGCAACTGTATCTCACAAGAAT +
Preference number: 6 (lower is better)
Translates to: LCQPGSGTFPMG*GWDTATVSHKN
Trigger: ATTCTTGTGAGATACAGTTGCTGTGTCCCATCCTCAGCCCATAGGGAATGTCCCTGAGCCAGGCTGGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS TCA 72 bp TCCATTTCAGGGGCTCCAGGACCAAAGCACGGCAGATaGGTCCACCAATATAAACTCTCTTGTGCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: SISGAPGPKHGR*VHQYKLSCASL
Trigger: CAGGCTGGCACAAGAGAGTTTATATTGGTGGACTCATCTGCCGTGCTTTGGTCCTGGAGCCCCTGAAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS CCA 72 bp GATGAGTCCACCAATATAAACTCTCTTGTGCCAGCCTaGCTCAGGGACATTCCCTATGGGCTGAGGATGGGA +
Preference number: 6 (lower is better)
Translates to: DESTNINSLVPA*LRDIPYGLRMG
Trigger: TCCCATCCTCAGCCCATAGGGAATGTCCCTGAGCCAGGCTGGCACAAGAGAGTTTATATTGGTGGACTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604419.1
CDS CCA 72 bp GTCACTCCGAAAAGTTTTCCGGATGCTCCCAGATTCTaGACGCTTCCTTTGCTTGGTGGTCACGGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: VTPKSFPDAPRF*TLPLLGGHGLC
Trigger: ACAAAGCCCGTGACCACCAAGCAAAGGAAGCGTCCAGAATCTGGGAGCATCCGGAAAACTTTTCGGAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604010.1
CDS TCA 72 bp GCTTGGGTGGGCCCACGGGACAACTGCTTCAAAGTGTaGGAATCAACCAACAGCCTATCAGATGAGATCTCT +
Preference number: 6 (lower is better)
Translates to: AWVGPRDNCFKV*ESTNSLSDEIS
Trigger: AGAGATCTCATCTGATAGGCTGTTGGTTGATTCTCACACTTTGAAGCAGTTGTCCCGTGGGCCCACCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604247.1
CDS CAA 72 bp AAGGCAAAGAGGTATCTCATGATAATCAGAGTGGTTTaGGGCAGGACTAGGAGGACTTTCCGGATGTGCAGA +
Preference number: 6 (lower is better)
Translates to: KAKRYLMIIRVV*GRTRRTFRMCR
Trigger: TCTGCACATCCGGAAAGTCCTCCTAGTCCTGCCCAAAACCACTCTGATTATCATGAGATACCTCTTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573034.8
ENST00000604419.1
ENST00000605476.5
ENST00000605610.5
ENST00000624873.3
CDS CAA 90 bp CTAGACAGCCAGATCGGGCGTGGGTGGAGTTTAAACCCCAGGATGTaGCTAACAGCCACAATGAAAGTTGTTGATGTTTGCAAGATAAAT +
Preference number: 6 (lower is better)
Translates to: LDSQIGRGWSLNPRM*LTATMKVVDVCKIN
Trigger: ATTTATCTTGCAAACATCAACAACTTTCATTGTGGCTGTTAGCAACATCCTGGGGTTTAAACTCCACCCACGCCCGATCTGGCTGTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604925.5
CDS CCA 72 bp GTCACTCCGAAAAGTTTTCCGGATGCTCCCAGATTCTaGACGCTTCCTTTGCTTGTTGATGTTTGCAAGATA +
Preference number: 6 (lower is better)
Translates to: VTPKSFPDAPRF*TLPLLVDVCKI
Trigger: TATCTTGCAAACATCAACAAGCAAAGGAAGCGTCCAGAATCTGGGAGCATCCGGAAAACTTTTCGGAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573034.8
ENST00000624873.3
CDS CAA 72 bp GGACGCTTCCTTTGCTTGGTGGTCACGGGCTTTGTGTaGTCAAGATGTAAGTTGTTGTTGATGTTTGCAAGA +
Preference number: 6 (lower is better)
Translates to: GRFLCLVVTGFV*SRCKLLLMFAR
Trigger: TCTTGCAAACATCAACAACAACTTACATCTTGACAACACAAAGCCCGTGACCACCAAGCAAAGGAAGCGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604010.1
CDS TCA 72 bp CTTCAAAGTGTGAGAATCAACCAACAGCCTATCAGATaGGATCTCTCTGGGACCAGTTCAGGTTTCCTTTGT +
Preference number: 6 (lower is better)
Translates to: LQSVRINQQPIR*DLSGTSSGFLC
Trigger: ACAAAGGAAACCTGAACTGGTCCCAGAGAGATCTCATCTGATAGGCTGTTGGTTGATTCTCACACTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604247.1
CDS TCA 72 bp CTATTGTTTACAAAAACAAGCCTGGATTATGAACAGTaGCAAGAGGCCAAGACCTCAATAATAACTCACAAC +
Preference number: 6 (lower is better)
Translates to: LLFTKTSLDYEQ*QEAKTSIITHN
Trigger: GTTGTGAGTTATTATTGAGGTCTTGGCCTCTTGTCACTGTTCATAATCCAGGCTTGTTTTTGTAAACAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624686.1