RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRGAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196935

Ensembl transcript IDs: ENST00000355086.8, ENST00000537556.1, ENST00000537585.1, ENST00000542381.1, ENST00000542841.1, ENST00000543397.1, ENST00000631006.2

Found 1289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTCTGCAGCAGCACGACTCCTGCCGGCCAAGACAGCAAAGTCCTaGTGGGGAGCACAGAAAGGCAATCCTCGTTCCACCGTAGGTGGA +
Preference number: 1 (lower is better)
Translates to: GSAAARLLPAKTAKS*WGAQKGNPRSTVGG
Trigger: TCCACCTACGGTGGAACGAGGATTGCCTTTCTGTGCTCCCCATCAGGACTTTGCTGTCTTGGCCGGCAGGAGTCGTGCTGCTGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR GCA 90 bp GGGAATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATaGTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGG +
Preference number: 1 (lower is better)
Translates to: GNEMVRGSTEHGRMR*CQQHMSGGLMRWDG
Trigger: CCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR GCA 90 bp CTGAAACAAGGCACAGCCTGTGAGGCTCTGCAGCAGCACGACTCCTaGCGGCCAAGACAGCAAAGTCCTGATGGGGAGCACAGAAAGGCA +
Preference number: 1 (lower is better)
Translates to: LKQGTACEALQQHDS*RPRQQSPDGEHRKA
Trigger: TGCCTTTCTGTGCTCCCCATCAGGACTTTGCTGTCTTGGCCGGCAGGAGTCGTGCTGCTGCAGAGCCTCACAGGCTGTGCCTTGTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp GCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATaGGAGGACACAGGGGTGAGAAAGGCACAATCACGTCTACAAGGA +
Preference number: 1 (lower is better)
Translates to: AMLSAAHERGTDAVG*EDTGVRKAQSRLQG
Trigger: TCCTTGTAGACGTGATTGTGCCTTTCTCACCCCTGTGTCCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp CTCTCCAGCCCAGCTGGAGCTTGTGTTCTCAACTTGGGAGGTGGGTaGCAGGTGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGA +
Preference number: 1 (lower is better)
Translates to: LSSPAGACVLNLGGG*QVVWSRELYLRLGR
Trigger: TCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGAACACAAGCTCCAGCTGGGCTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp GCCCAGCTGGAGCTTGTGTTCTCAACTTGGGAGGTGGGTGGCAGGTaGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCT +
Preference number: 1 (lower is better)
Translates to: AQLELVFSTWEVGGR*SGVGSSIYAWVETS
Trigger: AGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGAACACAAGCTCCAGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp ACCAAGCCTGACTCTCCAGCCCAGCTGGAGCTTGTGTTCTCAACTTaGGAGGTGGGTGGCAGGTGGTCTGGAGTAGGGAGCTCTATTTAC +
Preference number: 1 (lower is better)
Translates to: TKPDSPAQLELVFST*EVGGRWSGVGSSIY
Trigger: GTAAATAGAGCTCCCTACTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGAACACAAGCTCCAGCTGGGCTGGAGAGTCAGGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp AACTGGGTGAGAACCACAAGGCCATGTTCTGCTGATGGCCCTGCATaGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCTCAAAG +
Preference number: 1 (lower is better)
Translates to: NWVRTTRPCSADGPA*LLLRYQGQFRVGSK
Trigger: CTTTGAGCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGCAGAACATGGCCTTGTGGTTCTCACCCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp GAGGTGGGTGGCAGGTGGTCTGGAGTAGGGAGCTCTATTTACGCCTaGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGG +
Preference number: 1 (lower is better)
Translates to: EVGGRWSGVGSSIYA*VETSKLLCVSGFLW
Trigger: CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCACCTGCCACCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 90 bp GGTAGCTTGCTATGGCTGAAACTAAAGGTTCCGAAGAGGAGGTGGTaGGCAGGAAGGCTGAAATGGCAGGCTGAGGTCAAAGCGGCAGAC +
Preference number: 1 (lower is better)
Translates to: GSLLWLKLKVPKRRW*AGRLKWQAEVKAAD
Trigger: GTCTGCCGCTTTGACCTCAGCCTGCCATTTCAGCCTTCCTGCTCACCACCTCCTCTTCGGAACCTTTAGTTTCAGCCATAGCAAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp GAGGTAGACACATCCCTTTGTTACAGTGGGGGTCTGAAGGAGTGTTaGGGGGTGGGAAAGCCACCTCACTCTATGGGAAGGCGTGTGTAC +
Preference number: 1 (lower is better)
Translates to: EVDTSLCYSGGLKEC*GVGKPPHSMGRRVY
Trigger: GTACACACGCCTTCCCATAGAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAAAGGGATGTGTCTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 90 bp CGCTCCACATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATaGCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGC +
Preference number: 1 (lower is better)
Translates to: RSTWNRRCSLSATTQ*HYHLSAQVPQTNTG
Trigger: GCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCATGTGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR TCA 90 bp ACTGTTAGGAAAGAGGCAAGCATCCAACCCACTCGAGCTGTGGGCTaGCAGTCCCACTGGGATCGTCCCATGGAGACAATTGCAAGTCTT +
Preference number: 1 (lower is better)
Translates to: TVRKEASIQPTRAVG*QSHWDRPMETIASL
Trigger: AAGACTTGCAATTGTCTCCATGGGACGATCCCAGTGGGACTGTCAGCCCACAGCTCGAGTGGGTTGGATGCTTGCCTCTTTCCTAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR TCA 90 bp AGCATCCCCCTTTATTTTCACCTCAGAGAGGAGGGAATGAAATGGTaGGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGC +
Preference number: 1 (lower is better)
Translates to: SIPLYFHLREEGMKW*EAVQSTGECDAVSS
Trigger: GCTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATTCCCTCCTCTCTGAGGTGAAAATAAAGGGGGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp GATAATCATTTCAAGGAGGAGACAGTGGGCACAGCCACACCACCGTaGAAGCTACGGCAATCGTTGTGGCAAGGGGAATGGTGCACAGAA +
Preference number: 1 (lower is better)
Translates to: DNHFKEETVGTATPP*KLRQSLWQGEWCTE
Trigger: TTCTGTGCACCATTCCCCTTGCCACAACGATTGCCGTAGCTTCCACGGTGGTGTGGCTGTGCCCACTGTCTCCTCCTTGAAATGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 90 bp GACTCTGAAACGAACCCCCGGTTCATCCCTTCCTCTCCTTCTACCTaGCTATCTAGTCCAAGCCACCCTCATCTCCTGTGTTGCTCCTTA +
Preference number: 1 (lower is better)
Translates to: DSETNPRFIPSSPST*LSSPSHPHLLCCSL
Trigger: TAAGGAGCAACACAGGAGATGAGGGTGGCTTGGACTAGATAGCCAGGTAGAAGGAGAGGAAGGGATGAACCGGGGGTTCGTTTCAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp GAGACAGGTAAAGTGAGTGATGGGAGAGTATTAGGAGCTGTTTCCTaGAACAAGGCACAGCCTGTGAGGCTCTGCAGCAGCACGACTCCT +
Preference number: 1 (lower is better)
Translates to: ETGKVSDGRVLGAVS*NKAQPVRLCSSTTP
Trigger: AGGAGTCGTGCTGCTGCAGAGCCTCACAGGCTGTGCCTTGTTTCAGGAAACAGCTCCTAATACTCTCCCATCACTCACTTTACCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 90 bp CACCCTTGCTCTGCCTTTCTAAGATTCTTACAGGGTGCAGGCATATaGACTGTGGGAACTGACGACCAGTTACACCCCGTTGGGACTCTG +
Preference number: 1 (lower is better)
Translates to: HPCSAFLRFLQGAGI*TVGTDDQLHPVGTL
Trigger: CAGAGTCCCAACGGGGTGTAACTGGTCGTCAGTTCCCACAGTTCATATGCCTGCACCCTGTAAGAATCTTAGAAAGGCAGAGCAAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp GTGGGAAAGCCACCTCACTCTATGGGAAGGCGTGTGTACTATCGCTaGTCTTTCCATGTAACACCCTTTCTCCTGCCAAGAATGCCCCCT +
Preference number: 1 (lower is better)
Translates to: VGKPPHSMGRRVYYR*SFHVTPFLLPRMPP
Trigger: AGGGGGCATTCTTGGCAGGAGAAAGGGTGTTACATGGAAAGATCAGCGATAGTACACACGCCTTCCCATAGAGTGAGGTGGCTTTCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp ACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATaGGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTT +
Preference number: 1 (lower is better)
Translates to: TFQPKCHRPTLAILQ*GVAFGFFCLQVTTF
Trigger: AAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR TCA 90 bp CTTTCTAAGATTCTTACAGGGTGCAGGCATATGAACTGTGGGAACTaGCGACCAGTTACACCCCGTTGGGACTCTGGTTCGGGAGTGAGA +
Preference number: 1 (lower is better)
Translates to: LSKILTGCRHMNCGN*RPVTPRWDSGSGVR
Trigger: TCTCACTCCCGAACCAGAGTCCCAACGGGGTGTAACTGGTCGTCAGTTCCCACAGTTCATATGCCTGCACCCTGTAAGAATCTTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 90 bp CCTTCTACCTGGCTATCTAGTCCAAGCCACCCTCATCTCCTGTGTTaGTCCTTAATTGTGGTCTCTCACTTCCCTCATGCCATTCCTTCC +
Preference number: 1 (lower is better)
Translates to: PSTWLSSPSHPHLLC*SLIVVSHFPHAIPS
Trigger: GGAAGGAATGGCATGAGGGAAGTGAGAGACCACAATTAAGGAGCAACACAGGAGATGAGGGTGGCTTGGACTAGATAGCCAGGTAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTaGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTC +
Preference number: 1 (lower is better)
Translates to: AMPLSPFSPSATDQH*LYSNEVWHSGSSAF
Trigger: GAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR TCA 90 bp GAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTaGCTCAGCTGGGCTACATTAAACCTGAAGCTCTGTACAATGTGG +
Preference number: 1 (lower is better)
Translates to: EVWHSGSSAFRSQPF*LSWATLNLKLCTMW
Trigger: CCACATTGTACAGAGCTTCAGGTTTAATGTAGCCCAGCTGAGTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR TCA 90 bp AGGGACAAAGAAAAAGAAGTTGTGGTTGTGAGGTACACAACTGGGTaGGAACCACAAGGCCATGTTCTGCTGATGGCCCTGCATGGCTCT +
Preference number: 1 (lower is better)
Translates to: RDKEKEVVVVRYTTG*EPQGHVLLMALHGS
Trigger: AGAGCCATGCAGGGCCATCAGCAGAACATGGCCTTGTGGTTCTCACCCAGTTGTGTACCTCACAACCACAACTTCTTTTTCTTTGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 90 bp ACATCAGAGAGAGGAGCCGCTGGGGAGGATGACCAGATAGAAGGCTaGATAAATGAACAGGTAGGAGGAAGATCTGAAAAGCTAAGGCTG +
Preference number: 1 (lower is better)
Translates to: TSERGAAGEDDQIEG*INEQVGGRSEKLRL
Trigger: CAGCCTTAGCTTTTCAGATCTTCCTCCTACCTGTTCATTTATTCAGCCTTCTATCTGGTCATCCTCCCCAGCGGCTCCTCTCTCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp AGCAGGATGGTGGAGTCTTTCCTGGAACAACTCTACAGACTGATTTaGGCATTTGTTCCTGGTGGGCTAGCCTCTAAATCCAACTCTGTG +
Preference number: 1 (lower is better)
Translates to: SRMVESFLEQLYRLI*AFVPGGLASKSNSV
Trigger: CACAGAGTTGGATTTAGAGGCTAGCCCACCAGGAACAAATGCCCAAATCAGTCTGTAGAGTTGTTCCAGGAAAGACTCCACCATCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 90 bp AGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGAATTaGATCGCAAATATCCTAGAGCTGACGATCTCCTGGATCATGCTG +
Preference number: 1 (lower is better)
Translates to: RQLLGVKDPSISRQN*IANILELTISWIML
Trigger: CAGCATGATCCAGGAGATCGTCAGCTCTAGGATATTTGCGATCCAATTCTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp GCACCACCATGCCTGGGCTTTGTAGCATGTTTAAAGGAACCTAGGTaGTTTAGTCAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTG +
Preference number: 1 (lower is better)
Translates to: APPCLGFVACLKEPR*FSQKRTLHEPRPQV
Trigger: CACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTGACTAAATCACCTAGGTTCCTTTAAACATGCTACAAAGCCCAGGCATGGTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR TCA 90 bp TCCAGGGCTTCTTGCTTATGGTGGTACAGTCACAGTGAATGTGTTTaGCTCTTTAACCACGTGAGCATGGTCCTGTTTTCCCATGTGCAG +
Preference number: 1 (lower is better)
Translates to: SRASCLWWYSHSECV*LFNHVSMVLFSHVQ
Trigger: CTGCACATGGGAAAACAGGACCATGCTCACGTGGTTAAAGAGTCAAACACATTCACTGTGACTGTACCACCATAAGCAAGAAGCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 90 bp GAGTCCACTCGAGTCCAAACAATTCTCCAGGATGACCATCCTCCATaGAGTGACTTAACAGTCTGTGCTTTTCTAGCATTACAGCTCTGC +
Preference number: 1 (lower is better)
Translates to: ESTRVQTILQDDHPP*SDLTVCAFLALQLC
Trigger: GCAGAGCTGTAATGCTAGAAAAGCACAGACTGTTAAGTCACTGCATGGAGGATGGTCATCCTGGAGAATTGTTTGGACTCGAGTGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 90 bp TCAGTAAATGATGAATTTAGAGGTAGACACATCCCTTTGTTACAGTaGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTC +
Preference number: 1 (lower is better)
Translates to: SVNDEFRGRHIPLLQ*GSEGVLRGGKATSL
Trigger: GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAAAGGGATGTGTCTACCTCTAAATTCATCATTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp GGGCACCAAAGCCAGATTATGTTGTACGAAGATGTGCAAAGCTGTTaGATGGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCG +
Preference number: 1 (lower is better)
Translates to: GHQSQIMLYEDVQSC*MVLTLNVNMELYKA
Trigger: CGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACCATTCAACAGCTTTGCACATCTTCGTACAACATAATCTGGCTTTGGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp CTGTATGAGGTTCCAGGAAATAGTGGAACCAACTCAAGAGAAAAGTaGAGTGAGTCCCCAGAGATCTTAGGCTCTCAGCTATGCAGTAGA +
Preference number: 1 (lower is better)
Translates to: LYEVPGNSGTNSREK*SESPEILGSQLCSR
Trigger: TCTACTGCATAGCTGAGAGCCTAAGATCTCTGGGGACTCACTCCACTTTTCTCTTGAGTTGGTTCCACTATTTCCTGGAACCTCATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 90 bp TTACACCTTCTGGCCAGAAATCCTCCCCTGAGCTTCAAGTCCATCTaGCTCCTAGACTTCTCCACTTGGAAGTCTAATACCTATCTTAAA +
Preference number: 1 (lower is better)
Translates to: LHLLARNPPLSFKSI*LLDFSTWKSNTYLK
Trigger: TTTAAGATAGGTATTAGACTTCCAAGTGGAGAAGTCTAGGAGGCAGATGGACTTGAAGCTCAGGGGAGGATTTCTGGCCAGAAGGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 90 bp GCACTATATCCACTGATAACTGTTCACGATCATTGCAGTAGATTGTaGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCACC +
Preference number: 1 (lower is better)
Translates to: ALYPLITVHDHCSRL*DPAINYSTGGSRGT
Trigger: GGTGCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCAATGATCGTGAACAGTTATCAGTGGATATAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp GTCAGGATACTGATACATTCACAGAGGCATGAGCACAGTAGCTTCTaGGATGCTGATAATGTGCTATTGCTTAAACTGGGTGGTGGATAC +
Preference number: 1 (lower is better)
Translates to: VRILIHSQRHEHSSF*DADNVLLLKLGGGY
Trigger: GTATCCACCACCCAGTTTAAGCAATAGCACATTATCAGCATCCCAGAAGCTACTGTGCTCATGCCTCTGTGAATGTATCAGTATCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 90 bp CATTATAGGAAGATGACATTTCCTGGCCTCCCTTGCCATGTGACTTaGACATGTACAGTAGTGATTCATGTCTCCTCCATACCAAGACAG +
Preference number: 1 (lower is better)
Translates to: HYRKMTFPGLPCHVT*TCTVVIHVSSIPRQ
Trigger: CTGTCTTGGTATGGAGGAGACATGAATCACTACTGTACATGTCCAAGTCACATGGCAAGGGAGGCCAGGAAATGTCATCTTCCTATAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp CTCCTGGCTTATTGGCACAATCATCCACTTGCATTTAGAGGGACATaGTTTTTACACAAGGGGTTCCTTGGGTATGTCAGAGACAGAAGA +
Preference number: 1 (lower is better)
Translates to: LLAYWHNHPLAFRGT*FLHKGFLGYVRDRR
Trigger: TCTTCTGTCTCTGACATACCCAAGGAACCCCTTGTGTAAAAATCATGTCCCTCTAAATGCAAGTGGATGATTGTGCCAATAAGCCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 90 bp ACTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTaGACAAGGGTGTCAGTTTCTCTACACCCTGGCCAATACTTGTTA +
Preference number: 1 (lower is better)
Translates to: TVFLSGSTILHSHQQ*TRVSVSLHPGQYLL
Trigger: TAACAAGTATTGGCCAGGGTGTAGAGAAACTGACACCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 90 bp AAATATGGGCACAATCCTTCTTGTTTGTCGATCTCTCCTTGGCTCTaGCTTTTCATGCTGTTTCTACCTCTTTCTGCCACCTCATTCTTA +
Preference number: 1 (lower is better)
Translates to: KYGHNPSCLSISPWL*LFMLFLPLSATSFL
Trigger: TAAGAATGAGGTGGCAGAAAGAGGTAGAAACAGCATGAAAAGGCAGAGCCAAGGAGAGATCGACAAACAAGAAGGATTGTGCCCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp ATTTGCTATTTAGTTAGTGATGCATTAGGCTTGAAGATACAAAGATaGATAAGACACAGTAGTATGCCGTCCTGCAGCAGTGGGGACCCA +
Preference number: 1 (lower is better)
Translates to: ICYLVSDALGLKIQR*IRHSSMPSCSSGDP
Trigger: TGGGTCCCCACTGCTGCAGGACGGCATACTACTGTGTCTTATTCATCTTTGTATCTTCAAGCCTAATGCATCACTAACTAAATAGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTaGAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCT +
Preference number: 1 (lower is better)
Translates to: SSVQCGERCCLHYKW*SIGFSSKSKCFYCP
Trigger: AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR GCA 90 bp TTGACTCTTGGAGCACTATATCCACTGATAACTGTTCACGATCATTaGAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGC +
Preference number: 1 (lower is better)
Translates to: LTLGALYPLITVHDH*SRLWDPAINYSTGG
Trigger: GCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCAATGATCGTGAACAGTTATCAGTGGATATAGTGCTCCAAGAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 90 bp ATTACCAACCCATGCCTCAGTTTCCCAATATTTTCCAGGGCTATATaGCCTGTGGATAGAATTTACCATCATTCTGTGCTTTTAGGACCT +
Preference number: 1 (lower is better)
Translates to: ITNPCLSFPIFSRAI*PVDRIYHHSVLLGP
Trigger: AGGTCCTAAAAGCACAGAATGATGGTAAATTCTATCCACAGGCCATATAGCCCTGGAAAATATTGGGAAACTGAGGCATGGGTTGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp TATCTCTGGAATCTGAAGACATTTAATAAACCAAGTAAGGAGAGGTaGGTCTTTACTGAGTCCTCACTCACTCTGAGGTCATACCCTTCA +
Preference number: 1 (lower is better)
Translates to: YLWNLKTFNKPSKER*VFTESSLTLRSYPS
Trigger: TGAAGGGTATGACCTCAGAGTGAGTGAGGACTCAGTAAAGACTCACCTCTCCTTACTTGGTTTATTAAATGTCTTCAGATTCCAGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 90 bp TTAATGTCATGTCATTGTACAATTTTGAATGTGCCACTGGACCACTaGAGATGTTTCCTTCTCTCCTGGCTTATTGGCACAATCATCCAC +
Preference number: 1 (lower is better)
Translates to: LMSCHCTILNVPLDH*RCFLLSWLIGTIIH
Trigger: GTGGATGATTGTGCCAATAAGCCAGGAGAGAAGGAAACATCTTCAGTGGTCCAGTGGCACATTCAAAATTGTACAATGACATGACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 90 bp TTTGTAGCATGGAGTCTGGTACTCAATACATGTTGGCTATTGACATaGAACGTGTTGAGGAAAACGATGTCAGTACATGGTACATTTTCA +
Preference number: 1 (lower is better)
Translates to: FVAWSLVLNTCWLLT*NVLRKTMSVHGTFS
Trigger: TGAAAATGTACCATGTACTGACATCGTTTTCCTCAACACGTTGCATGTCAATAGCCAACATGTATTGAGTACCAGACTCCATGCTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 90 bp CCTCCCCTGAGCTTCAAGTCCATCTGCCTCCTAGACTTCTCCACTTaGAAGTCTAATACCTATCTTAAATTAAATAAATTCAAACGTGAA +
Preference number: 1 (lower is better)
Translates to: PPLSFKSICLLDFST*KSNTYLKLNKFKRE
Trigger: TTCACGTTTGAATTTATTTAATTTAAGATAGGTATTAGACTTCCAAGTGGAGAAGTCTAGGAGGCAGATGGACTTGAAGCTCAGGGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp AAATTTGTACAACTTTGCTGGAAAACAGGTCGGCAATATTTGTCATaGGCCTTACAGATAATTGCATCCTCTGACCCAGTGATTTCACTT +
Preference number: 1 (lower is better)
Translates to: KFVQLCWKTGRQYLS*ALQIIASSDPVISL
Trigger: AAGTGAAATCACTGGGTCAGAGGATGCAATTATCTGTAAGGCTCATGACAAATATTGCCGACCTGTTTTCCAGCAAAGTTGTACAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp TGGGTTTGGAATGATGAATATAATTTCAACAGGCAGTTGTCAGGATaGAGTAGGGGACATTTTAGGCTGAGGAATGACATGAAGTATATG +
Preference number: 1 (lower is better)
Translates to: WVWNDEYNFNRQLSG*SRGHFRLRNDMKYM
Trigger: CATATACTTCATGTCATTCCTCAGCCTAAAATGTCCCCTACTTCATCCTGACAACTGCCTGTTGAAATTATATTCATCATTCCAAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 90 bp AAGAAACATGACCATGTTTTATACTCGTGTACTGTTATGCATTACTaGCAGGGATGTAAATTTGTACAACTTTGCTGGAAAACAGGTCGG +
Preference number: 1 (lower is better)
Translates to: KKHDHVLYSCTVMHY*QGCKFVQLCWKTGR
Trigger: CCGACCTGTTTTCCAGCAAAGTTGTACAAATTTACATCCCTGCCAGTAATGCATAACAGTACACGAGTATAAAACATGGTCATGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp TTTCTAGACATGGAATGTCTCAAAATACACTCTCAATCAGGAAGCTaGTTAAGGATATACTGTGTTAAATCTAGGTCAGTCATGACTAGC +
Preference number: 1 (lower is better)
Translates to: FLDMECLKIHSQSGS*LRIYCVKSRSVMTS
Trigger: GCTAGTCATGACTGACCTAGATTTAACACAGTATATCCTTAATCAGCTTCCTGATTGAGAGTGTATTTTGAGACATTCCATGTCTAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 90 bp ATCAATTTAATCTCTTCCTGCAATAGAATGACTACACTGGCAAACTaGGGTAGAGATCAAAGTAATGATCTTGATTTTAGTACAGATCCC +
Preference number: 1 (lower is better)
Translates to: INLISSCNRMTTLAN*GRDQSNDLDFSTDP
Trigger: GGGATCTGTACTAAAATCAAGATCATTACTTTGATCTCTACCTCAGTTTGCCAGTGTAGTCATTCTATTGCAGGAAGAGATTAAATTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGAACTTGGGAGGTGGGTaGCAGGTGGTCTGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRNLGGG*QVVWSR
Trigger: CCTACTCCAGACCACCTGCCACCCACCTCCCAAGTT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGCCCACCTCCCCTGTGTaGTGCCTCTGTGGCTATAAA +
Preference number: 2 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRPTSPV*CLCGYK
Trigger: TTTATAGCCACAGAGGCAGCACACAGGGGAGGTGGG...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGAGGTACACAACTGGGTaGGAACCACAAGGCCATGTT +
Preference number: 2 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRRYTTG*EPQGHV
Trigger: AACATGGCCTTGTGGTTCTCACCCAGTTGTGTACCT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCCACTGCACTCCAGCCTaGGAGACGGAGCGGGACTAC +
Preference number: 2 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLHCTPA*ETERDY
Trigger: GTAGTCCCGCTCCGTCTCCCAGGCTGGAGTGCAGTG...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGTACCGGTACCGCAATTaGTCAAACCGACAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRYRYRN*SNRQER
Trigger: CCTTTCCTGTCGGTTTGATCAATTGCGGTACCGGTA...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGACCTCCCCTGTGTGCTaGCTCTGTGGCTATAAAGAA +
Preference number: 2 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRTSPVC*LCGYKE
Trigger: TTCTTTATAGCCACAGAGGCAGCACACAGGGGAGGT...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGTACTCCAATGAGGTGTaGCATTCGGGTTCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRYSNEV*HSGSSA
Trigger: GGCAGAAGAACCCGAATGCCACACCTCATTGGAGTA...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGAGGAAAGGACAATACTaGTTTAATTACGCGGGCAGC +
Preference number: 2 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRRKGQY*FNYAGS
Trigger: GCTGCCCGCGTAATTAAATCAGTATTGTCCTTTCCT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGGTGTCCAAGGGTGCTaGAGGACCCCAAAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWGVQGC*RTPKAQ
Trigger: CTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCACAAGGCACAGCCTGTaGGGCTCTGCAGCAGCACGA +
Preference number: 2 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLTRHSL*GSAAAR
Trigger: TCGTGCTGCTGCAGAGCCTCACAGGCTGTGCCTTGT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGCTTTGGAGGAGTTCGTaGAGTAGTGTAACCAGAAAG +
Preference number: 2 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRLWRSS*SSVTRK
Trigger: CTTTCTGGTTACACTACTCCACGAACTCCTCCAAAG...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCAACCACCCGAGTAGCTaGGAGTACAGGTGTGCACCA +
Preference number: 2 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLNHPSS*EYRCAP
Trigger: TGGTGCACACCTGTACTCCCAGCTACTCGGGTGGTT...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGAACTTGGGAGGTGGGTaGCAGGTGGTCTGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQNLGGG*QVVWSR
Trigger: CCTACTCCAGACCACCTGCCACCCACCTCCCAAGTT...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGATGGGCAGGGCCCTGTaGAGGACACCCTATTTCCAA +
Preference number: 2 (lower is better)
Translates to: STPDRQLLGVKDPSISRQMGRAL*RTPYFQ
Trigger: TTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCAT...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAACCACCCGAGTAGCTaGGAGTACAGGTGTGCACCA +
Preference number: 2 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLNHPSS*EYRCAP
Trigger: TGGTGCACACCTGTACTCCCAGCTACTCGGGTGGTT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGCTTGTGTTCTCAACTTaGGAGGTGGGTGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKLVFST*EVGGRW
Trigger: CCACCTGCCACCCACCTCCCAAGTTGAGAACACAAG...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp AGAGGTAGACACATCCCTTTGTTACAGTGGGGGTCTGAAGGAGTGTaGAGGGGTGGGAAAGCCACCTCACTCTATGGGAAGGCGTGTGTA +
Preference number: 2 (lower is better)
Translates to: RGRHIPLLQWGSEGV*RGGKATSLYGKACV
Trigger: TACACACGCCTTCCCATAGAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAAAGGGATGTGTCTACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCCTACCACATCCAAGGTaGCATTCAAGCTGTCCCATC +
Preference number: 2 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLLPHPR*HSSCPI
Trigger: GATGGGACAGCTTGAATGCCACCTTGGATGTGGTAG...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACGCCACAGACCAACACTaGCTATACTCCAATGAGGTG +
Preference number: 2 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDATDQH*LYSNEV
Trigger: CACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGC...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGTGTGAGGTACACAACTaGGTGAGAACCACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: STPDRQLLGVKDPSISRQCEVHN*VRTTRP
Trigger: TGGCCTTGTGGTTCTCACCCAGTTGTGTACCTCACA...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp AAAAGAAACCCAGTGACCCTCGGAAGCACCCCTGATAGACAGCTGTaGGGTGTGAAGGATCCATCCATAAGTCGCCAGAATTGGATCGCA +
Preference number: 2 (lower is better)
Translates to: KRNPVTLGSTPDRQL*GVKDPSISRQNWIA
Trigger: TGCGATCCAATTCTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCTTCCGAGGGTCACTGGGTTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATAGGTCACAACCTTTCTaGCTCAGCTGGGCTACATTA +
Preference number: 2 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDRSQPF*LSWATL
Trigger: TAATGTAGCCCAGCTGAGTCAGAAAGGTTGTGACCT...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTAGGTACACAACTGGGTaGGAACCACAAGGCCATGTT +
Preference number: 2 (lower is better)
Translates to: GVDTEREHGALQSATQQVRYTTG*EPQGHV
Trigger: AACATGGCCTTGTGGTTCTCACCCAGTTGTGTACCT...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTAGCCGCTGGGGAGGATaGCCAGATAGAAGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLISRWGG*PDRRLN
Trigger: ATTCAGCCTTCTATCTGGTCATCCTCCCCAGCGGCT...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCAGCCGCTGGGGAGGATaGCCAGATAGAAGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGSRWGG*PDRRLN
Trigger: ATTCAGCCTTCTATCTGGTCATCCTCCCCAGCGGCT...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGAGTCCTCACTCACTCTaGGGTCATACCCTTCATTTG +
Preference number: 2 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWSPHSL*GHTLHL
Trigger: CAAATGAAGGGTATGACCTCAGAGTGAGTGAGGACT...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCCTTTCATCCTGTAGATaGGTACCCTTGGGTATCCAT +
Preference number: 2 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLLSSCR*VPLGIH
Trigger: ATGGATACCCAAGGGTACTCATCTACAGGATGAAAG...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR GCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGAGGTGTGCACCACCATaGCTGGGCTTTGTAGCATGT +
Preference number: 2 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWRCAPP*LGFVAC
Trigger: ACATGCTACAAAGCCCAGGCATGGTGGTGCACACCT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGGCGTGCAATTGGCTaGCAGTTTGAAATGAAACCA +
Preference number: 2 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGRAIG*QFEMKP
Trigger: TGGTTTCATTTCAAACTGGCAGCCAATTGCACGCCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR GCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACGGGCGTGCAATTGGCTaGCAGTTTGAAATGAAACCA +
Preference number: 2 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDGRAIG*QFEMKP
Trigger: TGGTTTCATTTCAAACTGGCAGCCAATTGCACGCCC...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCGCCACAGACCAACACTaGCTATACTCCAATGAGGTG +
Preference number: 2 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLATDQH*LYSNEV
Trigger: CACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGC...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCAAAATTAGCTGGGTGTaGTTGTGCGCACTTGTAGTC +
Preference number: 2 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLKISWV*LCALVV
Trigger: GACTACAAGTGCGCACAACCACACCCAGCTAATTTT...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCAGTCCTCACTCACTCTaGGGTCATACCCTTCATTTG +
Preference number: 2 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLSPHSL*GHTLHL
Trigger: CAAATGAAGGGTATGACCTCAGAGTGAGTGAGGACT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTGTCAAAAGAGAACACTaGATGAACCAAGGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: GVDTEREHGALQSATQQVVKREH*MNQGLR
Trigger: CCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTGAC...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGTTTGTAAGTGTAGATaGGGGGACTTGGAAATCTCC +
Preference number: 2 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWVCKCR*GDLEIS
Trigger: GGAGATTTCCAAGTCCCCCCATCTACACTTACAAAC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGACTATTTTAAAGAAGTaGTGGAATGGCCGGGCATGG +
Preference number: 2 (lower is better)
Translates to: STPDRQLLGVKDPSISRQTILKK*WNGRAW
Trigger: CCATGCCCGGCCATTCCACCACTTCTTTAAAATAGT...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTTCGTTCCACCGTAGGTaGACACATCAGAGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLISFHRR*THQREE
Trigger: CTCCTCTCTCTGATGTGTCCACCTACGGTGGAACGA...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTTCTCAACTTGGGAGGTaGGTGGCAGGTGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: HILAFIFISRASCLWWYSSQLGR*VAGGLE
Trigger: CTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGA...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATAAGATGGGCTTGCCGTaGTTAACTAGAGTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDKMGLP*LTRVFL
Trigger: GAGAAAGACTCTAGTTAACCACGGCAAGCCCATCTT...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp TGCTGCCATAACTGCCTTCAAGATGTTAATACTGAACAAGGCATGTaGTTTCAGCACTGCGGGAGGAGCAATCTCTCTTCCCAACCCCTC +
Preference number: 2 (lower is better)
Translates to: CCHNCLQDVNTEQGM*FQHCGRSNLSSQPL
Trigger: GAGGGGTTGGGAAGAGAGATTGCTCCTCCCGCAGTGCTGAAACAACATGCCTTGTTCAGTATTAACATCTTGAAGGCAGTTATGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCAAAGAGAACACTGCATaGACCAAGGCCTCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGKENTA*TKASGA
Trigger: AGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTT...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGTCTATGGATGGGATGTaGACACACAGTTATATCAGC +
Preference number: 2 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQSMDGM*THSYIS
Trigger: GCTGATATAACTGTGTGTTCACATCCCATCCATAGA...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGATGAACTGTGGGAACTaGCGACCAGTTACACCCCGT +
Preference number: 2 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGMNCGN*RPVTPR
Trigger: ACGGGGTGTAACTGGTCGTCAGTTCCCACAGTTCAT...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR GCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTTGTGGAGAGCGGTGTTaGCTTCATTACAAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLICGERC*LHYKWC
Trigger: GCACCACTTGTAATGAAGGCAACACCGCTCTCCACA...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATTGTGGAGAGCGGTGTTaGCTTCATTACAAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNCGERC*LHYKWC
Trigger: GCACCACTTGTAATGAAGGCAACACCGCTCTCCACA...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR GCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGAAAATGGCCTCTCACTaGTATGGTCAGGAATCAATG +
Preference number: 2 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQKMASH*YGQESM
Trigger: CATTGATTCCTGACCATAGCAGTGAGAGGCCATTTT...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCCTGATAATGTGCTATTaGTTAAACTGGGTGGTGGAT +
Preference number: 2 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLLIMCY*LNWVVD
Trigger: ATCCACCACCCAGTTTAAGCAATAGCACATTATCAG...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR GCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGCTCAAGCAATCTTCCTaGCTCAGCCTCCCAAGTACC +
Preference number: 2 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGLKQSS*LSLPST
Trigger: GGTACTTGGGAGGCTGAGGCAGGAAGATTGCTTGAG...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCGGGCCAGTTCAGGGTTaGCTCAAAGACAAATGGAGA +
Preference number: 2 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGGPVQG*LKDKWR
Trigger: TCTCCATTTGTCTTTGAGCCAACCCTGAACTGGCCC...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCAAATTATTCTACAGGTaGCTCAAGGGGCACCAAAGC +
Preference number: 2 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLKLFYR*LKGHQS
Trigger: GCTTTGGTGCCCCTTGAGCCACCTGTAGAATAATTT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTGCATTCGGGTTCTTCTaGCTTCAGGTCACAACCTTT +
Preference number: 2 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIAFGFF*LQVTTF
Trigger: AAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGC...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR GCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGCCTCAGGTGCTTCTTaGTGCCTTCATTTCCACAGA +
Preference number: 2 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGASGAS*CLHFHR
Trigger: TCTGTGGAAATGAAGGCAGCAAGAAGCACCTGAGGC...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGGGGCATTCACAAATaGACGGTTCATATATTTTCT +
Preference number: 2 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGGIHK*TVHIFS
Trigger: AGAAAATATATGAACCGTGCATTTGTGAATGCCCCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTAAGCTCTGTACAATGTaGAGAGCGGTGTTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIKLCTM*RAVLPS
Trigger: TGAAGGCAACACCGCTCTCCACATTGTACAGAGCTT...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAAGCTCTGTACAATGTaGAGAGCGGTGTTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFKLCTM*RAVLPS
Trigger: TGAAGGCAACACCGCTCTCCACATTGTACAGAGCTT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCGTTTCATCCATATTGTaGCATATGACAGGAATTCCT +
Preference number: 2 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLVSSIL*HMTGIP
Trigger: AGGAATTCCTGTCATATGCCACAATATGGATGAAAC...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTTTCTAGGCAGTTATTaGATAACGGATCTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLFLGSY*ITDLWR
Trigger: CCTCCAAAGATCCGTTATTCAATAACTGCCTAGAAA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGGCATTCGGGTTCTTCTaGCTTCAGGTCACAACCTTT +
Preference number: 2 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRAFGFF*LQVTTF
Trigger: AAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGC...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCTGCCTTCATTACAAGTaGTGCAGCATTGGATTTTCA +
Preference number: 2 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSACLHYK*CSIGFS
Trigger: TGAAAATCCAATGCTGCACCACTTGTAATGAAGGCA...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR CAA 90 bp GGAGCACTATATCCACTGATAACTGTTCACGATCATTGCAGTAGATaGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: GALYPLITVHDHCSR*WDPAINYSTGGSRG
Trigger: GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCAATGATCGTGAACAGTTATCAGTGGATATAGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 90 bp AGTGATTCATGTCTCCTCCATACCAAGACAGAAAACCTCACATCATaGCAAGTGCTTTCTCTTCCTCTTCATGGTGGCCACGTACTAAGG +
Preference number: 2 (lower is better)
Translates to: SDSCLLHTKTENLTS*QVLSLPLHGGHVLR
Trigger: CCTTAGTACGTGGCCACCATGAAGAGGAAGAGAAAGCACTTGCAATGATGTGAGGTTTTCTGTCTTGGTATGGAGGAGACATGAATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGACTGGCTATACTCCAATaGGGTGTGGCATTCGGGTTC +
Preference number: 2 (lower is better)
Translates to: IDKMLIGLQVISAAASRRLAILQ*GVAFGF
Trigger: GAACCCGAATGCCACACCTCATTGGAGTATAGCCAG...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTCCGAAGAGGAGGTGGTaGGCAGGAAGGCTGAAATGG +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAPKRRW*AGRLKW
Trigger: CCATTTCAGCCTTCCTGCTCACCACCTCCTCTTCGG...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR GCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGGCTCAAATTCCAGTTTaGTTTATGGATCTGACAAAA +
Preference number: 2 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQAQIPV*FMDLTK
Trigger: TTTTGTCAGATCCATAAAGCAAACTGGAATTTGAGC...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTCACGGGCGAATGCGATaGTGTCAGCAGCACATGAGC +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAHGRMR*CQQHMS
Trigger: GCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTG...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTGCCTTCATTACAAGTaGTGCAGCATTGGATTTTCA +
Preference number: 2 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYCLHYK*CSIGFS
Trigger: TGAAAATCCAATGCTGCACCACTTGTAATGAAGGCA...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTACTCCAATGAGGTGTaGCATTCGGGTTCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSYSNEV*HSGSSA
Trigger: GGCAGAAGAACCCGAATGCCACACCTCATTGGAGTA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCAATGGAGAGGACAGTTaGGATTTCAAATTTAGGATC +
Preference number: 2 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLNGEDS*DFKFRI
Trigger: GATCCTAAATTTGAAATCCCAACTGTCCTCTCCATT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGCAAGCTCTCCCAAGCTaGGCTTCCCAGGGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLQALPS*ASQGLV
Trigger: AACCAAGCCCTGGGAAGCCCAGCTTGGGAGAGCTTG...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp GTTATTTGTTCAGTAAATGATGAATTTAGAGGTAGACACATCCCTTaGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: VICSVNDEFRGRHIP*LQWGSEGVLRGGKA
Trigger: GGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAAAGGGATGTGTCTACCTCTAAATTCATCATTTACTGAACAAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTGCTGAAATGGCAGGCTaGGGTCAAAGCGGCAGACAT +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAAEMAG*GQSGRH
Trigger: ATGTCTGCCGCTTTGACCTCAGCCTGCCATTTCAGC...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTCAGCTACCACGCAATaGCATTATCACCTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSSATTQ*HYHLSA
Trigger: GGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCAAGCTCTGTACAATGTaGAGAGCGGTGTTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSKLCTM*RAVLPS
Trigger: TGAAGGCAACACCGCTCTCCACATTGTACAGAGCTT...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CCA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGAAAGAAGTGGTGGAATaGCCGGGCATGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLKEVVE*PGMVAH
Trigger: GTGAGCCACCATGCCCGGCCATTCCACCACTTCTTT...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCAGTGAGTTCTATGGATaGGATGTGAACACACAGTTA +
Preference number: 2 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGSEFYG*DVNTQL
Trigger: TAACTGTGTGTTCACATCCCATCCATAGAACTCACT...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGGTCTCAGGGTTTCTGTaGTGGATAATCGAAAACAAG +
Preference number: 2 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGVSGFL*WIIENK
Trigger: CTTGTTTTCGATTATCCACCACAGAAACCCTGAGAC...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAAGGTCACAACCTTTCTaGCTCAGCTGGGCTACATTA +
Preference number: 2 (lower is better)
Translates to: IDKMLIGLQVISAAASRRRSQPF*LSWATL
Trigger: TAATGTAGCCCAGCTGAGTCAGAAAGGTTGTGACCT...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTTCTATGGATGGGATGTaGACACACAGTTATATCAGC +
Preference number: 2 (lower is better)
Translates to: HILAFIFISRASCLWWYSSMDGM*THSYIS
Trigger: GCTGATATAACTGTGTGTTCACATCCCATCCATAGA...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTGGACACAGAGGTGAGTaGAATAGAGATTTGTACTCT +
Preference number: 2 (lower is better)
Translates to: HILAFIFISRASCLWWYSGHRGE*NRDLYS
Trigger: AGAGTACAAATCTCTATTTCACTCACCTCTGTGTCC...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCATTTTAAAGAAGTGGTaGAATGGCCGGGCATGGTGG +
Preference number: 2 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATILKKW*NGRAWW
Trigger: CCACCATGCCCGGCCATTCCACCACTTCTTTAAAAT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCACTGTTCACGATCATTaGAGTAGATTGTGGGACCCT +
Preference number: 2 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATTVHDH*SRLWDP
Trigger: AGGGTCCCACAATCTACTGCAATGATCGTGAACAGT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR GCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGGCCTGTAATGGTACATaGCAAAAATGTACAGTACTA +
Preference number: 2 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGACNGT*QKCTVL
Trigger: TAGTACTGTACATTTTTGGCATGTACCATTACAGGC...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp ATGAGGGTTAACATTTGTAGCATGGAGTCTGGTACTCAATACATGTaGGCTATTGACATGCAACGTGTTGAGGAAAACGATGTCAGTACA +
Preference number: 2 (lower is better)
Translates to: MRVNICSMESGTQYM*AIDMQRVEENDVST
Trigger: TGTACTGACATCGTTTTCCTCAACACGTTGCATGTCAATAGCCAACATGTATTGAGTACCAGACTCCATGCTACAAATGTTAACCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp ATAATGCTAGAGAGAATAGAGAAATATGGGCACAATCCTTCTTGTTaGTCGATCTCTCCTTGGCTCTGCCTTTTCATGCTGTTTCTACCT +
Preference number: 2 (lower is better)
Translates to: IMLERIEKYGHNPSC*SISPWLCLFMLFLP
Trigger: AGGTAGAAACAGCATGAAAAGGCAGAGCCAAGGAGAGATCGACAAACAAGAAGGATTGTGCCCATATTTCTCTATTCTCTCTAGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGCCAAGTAAGGAGAGGTaGGTCTTTACTGAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLPSKER*VFTESS
Trigger: TGAGGACTCAGTAAAGACTCACCTCTCCTTACTTGG...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTTCCCCAAATTGCACATaGAGCCTGATAAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLASPNCT*SLISSL
Trigger: CAAGGAGCTTATCAGGCTTCATGTGCAATTTGGGGA...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCCATCACACTACACACTaGACTTGGATGAATGCTCTA +
Preference number: 2 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATHHTTH*TWMNAL
Trigger: TAGAGCATTCATCCAAGTTCAGTGTGTAGTGTGATG...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR TCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTAGCAGGGTAATGACATaGGCATGTTACAGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLASRVMT*ACYRGQ
Trigger: CTGACCTCTGTAACATGCTCATGTCATTACCCTGCT...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTTTCTTCCCTGGGTACTaGTCACATTACATGCTCCTC +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAFFPGY*SHYMLL
Trigger: GAGGAGCATGTAATGTGATCAGTACCCAGGGAAGAA...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR GCA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGCTAGCATTACAGCTCTaGCATCTTAACGGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLLALQL*HLNGRL
Trigger: AAGCCTCCCGTTAAGATGGCAGAGCTGTAATGCTAG...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp TTTTTAAGAACGTATACTAGGGTAAGTGAAAGCTCAAATTCCAGTTaGCTTTATGGATCTGACAAAACTTCGCCAAAGTCACCCTGCACC +
Preference number: 2 (lower is better)
Translates to: FLRTYTRVSESSNSS*LYGSDKTSPKSPCT
Trigger: GGTGCAGGGTGACTTTGGCGAAGTTTTGTCAGATCCATAAAGCAAACTGGAATTTGAGCTTTCACTTACCCTAGTATACGTTCTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 90 bp TTAACATTTGTAGCATGGAGTCTGGTACTCAATACATGTTGGCTATaGACATGCAACGTGTTGAGGAAAACGATGTCAGTACATGGTACA +
Preference number: 2 (lower is better)
Translates to: LTFVAWSLVLNTCWL*TCNVLRKTMSVHGT
Trigger: TGTACCATGTACTGACATCGTTTTCCTCAACACGTTGCATGTCAATAGCCAACATGTATTGAGTACCAGACTCCATGCTACAAATGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp TTATGTGTATGGCACATTTTCTTTACCCATTCATCCATTCATGGGTaGCTTCTCTCTTGTGGCTATTGTGAATTAAGCTGCGTGAACATG +
Preference number: 2 (lower is better)
Translates to: LCVWHIFFTHSSIHG*LLSCGYCELSCVNM
Trigger: CATGTTCACGCAGCTTAATTCACAATAGCCACAAGAGAGAAGCAACCCATGAATGGATGAATGGGTAAAGAAAATGTGCCATACACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGCAGATAAAAGGCTACTaGAGAGGTGATGAACCTCAC +
Preference number: 2 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLQIKGY*RGDEPH
Trigger: GTGAGGTTCATCACCTCTTCAGTAGCCTTTTATCTG...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR GCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCTGTTGTACGAAGATGTaGAAAGCTGTTGAATGGTGT +
Preference number: 2 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATCCTKM*KAVEWC
Trigger: ACACCATTCAACAGCTTTGCACATCTTCGTACAACA...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCCGATGCATTCACCAATaGGCTGATGAAGTAAAATCT +
Preference number: 2 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATRCIHQ*ADEVKS
Trigger: AGATTTTACTTCATCAGCCCATTGGTGAATGCATCG...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 90 bp TCTTTCTCAAAAGAAAGATTTCAATCTGGTGTATGTTTAGGAGGCTaGTACACTCTCAGCTTCTCAGTTAAGTGTCTGCCAAGACTCTTT +
Preference number: 2 (lower is better)
Translates to: SFSKERFQSGVCLGG*YTLSFSVKCLPRLF
Trigger: AAAGAGTCTTGGCAGACACTTAACTGAGAAGCTGAGAGTGTACAAGCCTCCTAAACATACACCAGATTGAAATCTTTCTTTTGAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 90 bp TGGAGTCTGGTACTCAATACATGTTGGCTATTGACATGCAACGTGTaGAGGAAAACGATGTCAGTACATGGTACATTTTCAATGATTGTT +
Preference number: 2 (lower is better)
Translates to: WSLVLNTCWLLTCNV*RKTMSVHGTFSMIV
Trigger: AACAATCATTGAAAATGTACCATGTACTGACATCGTTTTCCTCAACACGTTGCATGTCAATAGCCAACATGTATTGAGTACCAGACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR TCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTGCATTTAGAGGGACATaGTTTTTACACAAGGGGTTC +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAAFRGT*FLHKGF
Trigger: GAACCCCTTGTGTAAAAATCATGTCCCTCTAAATGC...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGTGTCATGTTCCTTTTTaGAAACTTCCAATGGCTTTC +
Preference number: 2 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLCHVPF*KLPMAF
Trigger: GAAAGCCATTGGAAGTTTCCAAAAAGGAACATGACA...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTATATTCTTGTGTCAGTaGAGTCAGGTAATCTTTGTA +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAIFLCQ*SQVIFV
Trigger: TACAAAGATTACCTGACTCCACTGACACAAGAATAT...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTTATTCCGTCATAGTTTaGGAAAACAATTCCTTTGAC +
Preference number: 2 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAYSVIV*ENNSFD
Trigger: GTCAAAGGAATTGTTTTCCCAAACTATGACGGAATA...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp CCGGGAGGCAGAGGTTGCGGTGAGCCGAGGTCGTGGTaGGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: PGGRGCGEPRSW*AEVAPLHSSLG
Trigger: TCCCAGGCTGGAGTGCAGTGGCGCGACCTCGGCTCACCACGACCTCGGCTCACCGCAACCTCTGCCTCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp GGAGAATCGCTTGAAACCGGGAGGCAGAGGTTGCGGTaGGCCGAGGTCGTGGTGAGCCGAGGTCGCGCCACT +
Preference number: 3 (lower is better)
Translates to: GESLETGRQRLR*AEVVVSRGRAT
Trigger: AGTGGCGCGACCTCGGCTCACCACGACCTCGGCTCACCGCAACCTCTGCCTCCCGGTTTCAAGCGATTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp TCTGAGGACCGACAGGGAGGTGAGATGGGACATTACTaGGCACCGAGGCACAGGAAGGCGGGGATGGGGAAG +
Preference number: 3 (lower is better)
Translates to: SEDRQGGEMGHY*APRHRKAGMGK
Trigger: CTTCCCCATCCCCGCCTTCCTGTGCCTCGGTGCTCAGTAATGTCCCATCTCACCTCCCTGTCGGTCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR GCA 72 bp ATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATaGTGTCAGCAGCACATGAGCGGGGGACTGATGCGG +
Preference number: 3 (lower is better)
Translates to: MVRGSTEHGRMR*CQQHMSGGLMR
Trigger: CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp GACTCTCCAGCCCAGCTGGAGCTTGTGTTCTCAACTTaGGAGGTGGGTGGCAGGTGGTCTGGAGTAGGGAGC +
Preference number: 3 (lower is better)
Translates to: DSPAQLELVFST*EVGGRWSGVGS
Trigger: GCTCCCTACTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGAACACAAGCTCCAGCTGGGCTGGAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGAGGGCCAGTTCAGGGTaGGCTCAAAGACAAATGGAG +
Preference number: 3 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRRASSG*AQRQME
Trigger: CTCCATTTGTCTTTGAGCCAACCCTGAACTGGCCCT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGACTCAGGAGAATTGCTaGAACCCGGGAGATGGAGGT +
Preference number: 3 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRTQENC*NPGDGG
Trigger: ACCTCCATCTCCCGGGTTCAAGCAATTCTCCTGAGT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp GCAGCACGACTCCTGCCGGCCAAGACAGCAAAGTCCTaGTGGGGAGCACAGAAAGGCAATCCTCGTTCCACC +
Preference number: 3 (lower is better)
Translates to: AARLLPAKTAKS*WGAQKGNPRST
Trigger: GGTGGAACGAGGATTGCCTTTCTGTGCTCCCCATCAGGACTTTGCTGTCTTGGCCGGCAGGAGTCGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp GGGAGCACAGAAAGGCAATCCTCGTTCCACCGTAGGTaGACACATCAGAGAGAGGAGCCGCTGGGGAGGATG +
Preference number: 3 (lower is better)
Translates to: GSTERQSSFHRR*THQREEPLGRM
Trigger: CATCCTCCCCAGCGGCTCCTCTCTCTGATGTGTCCACCTACGGTGGAACGAGGATTGCCTTTCTGTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp TCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATaGGAGGACACAGGGGTGAGAAAGGCACAATCACGT +
Preference number: 3 (lower is better)
Translates to: SAAHERGTDAVG*EDTGVRKAQSR
Trigger: ACGTGATTGTGCCTTTCTCACCCCTGTGTCCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp TGGGAACTGACGACCAGTTACACCCCGTTGGGACTCTaGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAAT +
Preference number: 3 (lower is better)
Translates to: WELTTSYTPLGL*FGSERWGGRRN
Trigger: ATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGAGTCCCAACGGGGTGTAACTGGTCGTCAGTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGCCCGGGAGATGGAGGTaGCAGGGAGCCGAGATTGCA +
Preference number: 3 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWPGRWR*QGAEIA
Trigger: TGCAATCTCGGCTCCCTGCAACCTCCATCTCCCGGG...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp AAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATaGGACATTACTGAGCACCGAGGCACAGGAAGGCGG +
Preference number: 3 (lower is better)
Translates to: KRDSLRTDREVR*DITEHRGTGRR
Trigger: CCGCCTTCCTGTGCCTCGGTGCTCAGTAATGTCCCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp TTCAAGGAGGAGACAGTGGGCACAGCCACACCACCGTaGAAGCTACGGCAATCGTTGTGGCAAGGGGAATGG +
Preference number: 3 (lower is better)
Translates to: FKEETVGTATPP*KLRQSLWQGEW
Trigger: CCATTCCCCTTGCCACAACGATTGCCGTAGCTTCCACGGTGGTGTGGCTGTGCCCACTGTCTCCTCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp TTAGGAAAGAGGCAAGCATCCAACCCACTCGAGCTGTaGGCTGACAGTCCCACTGGGATCGTCCCATGGAGA +
Preference number: 3 (lower is better)
Translates to: LGKRQASNPLEL*ADSPTGIVPWR
Trigger: TCTCCATGGGACGATCCCAGTGGGACTGTCAGCCCACAGCTCGAGTGGGTTGGATGCTTGCCTCTTTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR CCA 72 bp CCAGCTGGAGCTTGTGTTCTCAACTTGGGAGGTGGGTaGCAGGTGGTCTGGAGTAGGGAGCTCTATTTACGC +
Preference number: 3 (lower is better)
Translates to: PAGACVLNLGGG*QVVWSRELYLR
Trigger: GCGTAAATAGAGCTCCCTACTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGAACACAAGCTCCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGCTTGTGTTCTCAACTaGGGAGGTGGGTGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWACVLN*GGGWQV
Trigger: CACCTGCCACCCACCTCCCAAGTTGAGAACACAAGC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp ACACAACTGGGTGAGAACCACAAGGCCATGTTCTGCTaGTGGCCCTGCATGGCTCTTACTCAGGTACCAGGG +
Preference number: 3 (lower is better)
Translates to: TQLGENHKAMFC*WPCMALTQVPG
Trigger: CCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGCAGAACATGGCCTTGTGGTTCTCACCCAGTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp GGCAGGTGGTCTGGAGTAGGGAGCTCTATTTACGCCTaGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: GRWSGVGSSIYA*VETSKLLCVSG
Trigger: CCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp GAGCTTGTGTTCTCAACTTGGGAGGTGGGTGGCAGGTaGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTA +
Preference number: 3 (lower is better)
Translates to: ELVFSTWEVGGR*SGVGSSIYAWV
Trigger: TACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGAACACAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp ACGAACCCCCGGTTCATCCCTTCCTCTCCTTCTACCTaGCTATCTAGTCCAAGCCACCCTCATCTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: TNPRFIPSSPST*LSSPSHPHLLC
Trigger: ACACAGGAGATGAGGGTGGCTTGGACTAGATAGCCAGGTAGAAGGAGAGGAAGGGATGAACCGGGGGTTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp CCCAAGTGCCACAGACCAACACTGGCTATACTCCAATaGGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTC +
Preference number: 3 (lower is better)
Translates to: PKCHRPTLAILQ*GVAFGFFCLQV
Trigger: GACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR TCA 72 bp TTCAGCTGCACAGCCAAGCAGCTAAAAGAAACCCAGTaGCCCTCGGAAGCACCCCTGATAGACAGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: FSCTAKQLKETQ*PSEAPLIDSCW
Trigger: CCAACAGCTGTCTATCAGGGGTGCTTCCGAGGGTCACTGGGTTTCTTTTAGCTGCTTGGCTGTGCAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp ACATCCCTTTGTTACAGTGGGGGTCTGAAGGAGTGTTaGGGGGTGGGAAAGCCACCTCACTCTATGGGAAGG +
Preference number: 3 (lower is better)
Translates to: TSLCYSGGLKEC*GVGKPPHSMGR
Trigger: CCTTCCCATAGAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAAAGGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp CTGCAACCTCCGTCTCATGGGTTCAAGCAATTCCCCTaGTTCAGCCTCCCGAGTAGGTGGGATTACAGTTGT +
Preference number: 3 (lower is better)
Translates to: LQPPSHGFKQFP*FSLPSRWDYSC
Trigger: ACAACTGTAATCCCACCTACTCGGGAGGCTGAAGCAGGGGAATTGCTTGAACCCATGAGACGGAGGTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp CCTCATGCCATTCCTTCCCAAGCTCCTCCCCACCCGTaGACCCCAAACACAACTACAACATCTACAGTGATG +
Preference number: 3 (lower is better)
Translates to: PHAIPSQAPPHP*TPNTTTTSTVM
Trigger: CATCACTGTAGATGTTGTAGTTGTGTTTGGGGTCCACGGGTGGGGAGGAGCTTGGGAAGGAATGGCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp CCACCCAAGCTCTCCCAAGCTGGGCTTCCCAGGGCTTaGTTATGTGCTCTGTACCTTCCTTTCTCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: PPKLSQAGLPRA*LCALYLPFSFS
Trigger: AGAGAAAGAGAAAGGAAGGTACAGAGCACATAACCAAGCCCTGGGAAGCCCAGCTTGGGAGAGCTTGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp ATTCTTACAGGGTGCAGGCATATGAACTGTGGGAACTaGCGACCAGTTACACCCCGTTGGGACTCTGGTTCG +
Preference number: 3 (lower is better)
Translates to: ILTGCRHMNCGN*RPVTPRWDSGS
Trigger: CGAACCAGAGTCCCAACGGGGTGTAACTGGTCGTCAGTTCCCACAGTTCATATGCCTGCACCCTGTAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp TGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATaGCATTATCACCTTTCAGCCCAAGTGCCACAGACC +
Preference number: 3 (lower is better)
Translates to: WNRRCSLSATTQ*HYHLSAQVPQT
Trigger: GGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR GCA 72 bp GCAATCATTTCTTCCCTGGGTACTGATCACATTACATaGTCCTCCTGGTTTTCCTCCTCCGCCCTGGCTGCT +
Preference number: 3 (lower is better)
Translates to: AIISSLGTDHIT*SSWFSSSALAA
Trigger: AGCAGCCAGGGCGGAGGAGGAAAACCAGGAGGAGCATGTAATGTGATCAGTACCCAGGGAAGAAATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp GCCACAGACCAACACTGGCTATACTCCAATGAGGTGTaGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCT +
Preference number: 3 (lower is better)
Translates to: ATDQHWLYSNEV*HSGSSAFRSQP
Trigger: AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR CCA 72 bp AGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCTATaGGAAGGCGTGTGTACTATCGCTGATCTTTCCATG +
Preference number: 3 (lower is better)
Translates to: RSVEGWESHLTL*EGVCTIADLSM
Trigger: CATGGAAAGATCAGCGATAGTACACACGCCTTCCCATAGAGTGAGGTGGCTTTCCCACCCCTCAACACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCACTCAGGAGAATTGCTaGAACCCGGGAGATGGAGGT +
Preference number: 3 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLTQENC*NPGDGG
Trigger: ACCTCCATCTCCCGGGTTCAAGCAATTCTCCTGAGT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGCTTAACGGATACAATTaGACTCTTGGAGCACTATAT +
Preference number: 3 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRLNGYN*TLGALY
Trigger: ATATAGTGCTCCAAGAGTCAAATTGTATCCGTTAAG...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGAACCGAAGGTGCTCATaGTCAGCTACCACGCAATGC +
Preference number: 3 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWNRRCS*SATTQC
Trigger: GCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGTGTGAAGTGGCCACCTaGTCTTATCTCTGGAATCTG +
Preference number: 3 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQCEVAT*SYLWNL
Trigger: CAGATTCCAGAGATAAGACAAGGTGGCCACTTCACA...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp GGGACCCACGTGTGGCTTTTGAGCAGGGTAATGACATaGGCATGTTACAGAGGTCAGAATGCAGCAGTGGTT +
Preference number: 3 (lower is better)
Translates to: GTHVWLLSRVMT*ACYRGQNAAVV
Trigger: AACCACTGCTGCATTCTGACCTCTGTAACATGCTCATGTCATTACCCTGCTCAAAAGCCACACGTGGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp TCCCAACTACTCAAGGCAGAAGCCAGCAAACACCCTTaGTCTGCCTTTCTAAGATTCTTACAGGGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: SQLLKAEASKHP*SAFLRFLQGAG
Trigger: GCCTGCACCCTGTAAGAATCTTAGAAAGGCAGAGCAAGGGTGTTTGCTGGCTTCTGCCTTGAGTAGTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp GATGTTAATACTGAACAAGGCATGTTGTTTCAGCACTaGGGGAGGAGCAATCTCTCTTCCCAACCCCTCCGC +
Preference number: 3 (lower is better)
Translates to: DVNTEQGMLFQH*GRSNLSSQPLR
Trigger: GCGGAGGGGTTGGGAAGAGAGATTGCTCCTCCCGCAGTGCTGAAACAACATGCCTTGTTCAGTATTAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp TGGCTATCTAGTCCAAGCCACCCTCATCTCCTGTGTTaGTCCTTAATTGTGGTCTCTCACTTCCCTCATGCC +
Preference number: 3 (lower is better)
Translates to: WLSSPSHPHLLC*SLIVVSHFPHA
Trigger: GGCATGAGGGAAGTGAGAGACCACAATTAAGGAGCAACACAGGAGATGAGGGTGGCTTGGACTAGATAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp CTGGCCAGAAATCCTCCCCTGAGCTTCAAGTCCATCTaGCTCCTAGACTTCTCCACTTGGAAGTCTAATACC +
Preference number: 3 (lower is better)
Translates to: LARNPPLSFKSI*LLDFSTWKSNT
Trigger: GGTATTAGACTTCCAAGTGGAGAAGTCTAGGAGGCAGATGGACTTGAAGCTCAGGGGAGGATTTCTGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATATGTGGAGAGCGGTGTaGCCTTCATTACAAGTGGTG +
Preference number: 3 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYMWRAV*PSLQVV
Trigger: CACCACTTGTAATGAAGGCAACACCGCTCTCCACAT...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CAA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACACAATTGCAAGTCTTTaGCATGAGCTAAACCCCGCT +
Preference number: 3 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDTIASL*HELNPA
Trigger: AGCGGGGTTTAGCTCATGCAAAAGACTTGCAATTGT...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGTATGTTTAGGAGGCTaGTACACTCTCAGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: STPDRQLLGVKDPSISRQVCLGG*YTLSFS
Trigger: TGAGAAGCTGAGAGTGTACAAGCCTCCTAAACATAC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp GAAAAAGAAGTTGTGGTTGTGAGGTACACAACTGGGTaGGAACCACAAGGCCATGTTCTGCTGATGGCCCTG +
Preference number: 3 (lower is better)
Translates to: EKEVVVVRYTTG*EPQGHVLLMAL
Trigger: CAGGGCCATCAGCAGAACATGGCCTTGTGGTTCTCACCCAGTTGTGTACCTCACAACCACAACTTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp CCTGTGTGCTGCCTCTGTGGCTATAAAGAAGGGCTGTaGACCTTCTCAGCTGCAGTGGCTTTTAATGAGCTT +
Preference number: 3 (lower is better)
Translates to: PVCCLCGYKEGL*TFSAAVAFNEL
Trigger: AAGCTCATTAAAAGCCACTGCAGCTGAGAAGGTTCACAGCCCTTCTTTATAGCCACAGAGGCAGCACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp CCACCTCACTCTATGGGAAGGCGTGTGTACTATCGCTaGTCTTTCCATGTAACACCCTTTCTCCTGCCAAGA +
Preference number: 3 (lower is better)
Translates to: PPHSMGRRVYYR*SFHVTPFLLPR
Trigger: TCTTGGCAGGAGAAAGGGTGTTACATGGAAAGATCAGCGATAGTACACACGCCTTCCCATAGAGTGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGGACACCTCTGGCCCTTaGATGCCCTCTGTTAACATC +
Preference number: 3 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGDTSGP*MPSVNI
Trigger: GATGTTAACAGAGGGCATCAAAGGGCCAGAGGTGTC...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp CATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTaGCTCAGCTGGGCTACATTAAACCTGAAGCTCTGT +
Preference number: 3 (lower is better)
Translates to: HSGSSAFRSQPF*LSWATLNLKLC
Trigger: ACAGAGCTTCAGGTTTAATGTAGCCCAGCTGAGTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR TCA 72 bp AGAGGAGCCGCTGGGGAGGATGACCAGATAGAAGGCTaGATAAATGAACAGGTAGGAGGAAGATCTGAAAAG +
Preference number: 3 (lower is better)
Translates to: RGAAGEDDQIEG*INEQVGGRSEK
Trigger: CTTTTCAGATCTTCCTCCTACCTGTTCATTTATTCAGCCTTCTATCTGGTCATCCTCCCCAGCGGCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp TCTGCCTTTCTAAGATTCTTACAGGGTGCAGGCATATaGACTGTGGGAACTGACGACCAGTTACACCCCGTT +
Preference number: 3 (lower is better)
Translates to: SAFLRFLQGAGI*TVGTDDQLHPV
Trigger: AACGGGGTGTAACTGGTCGTCAGTTCCCACAGTTCATATGCCTGCACCCTGTAAGAATCTTAGAAAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp ACTACTCAAGGCAGAAGCCAGCAAACACCCTTGCTCTaGCTTTCTAAGATTCTTACAGGGTGCAGGCATATG +
Preference number: 3 (lower is better)
Translates to: TTQGRSQQTPLL*LSKILTGCRHM
Trigger: CATATGCCTGCACCCTGTAAGAATCTTAGAAAGGCAGAGCAAGGGTGTTTGCTGGCTTCTGCCTTGAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp CTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTaGACAAGGGTGTCAGTTTCTCTACACCCTGGCCAA +
Preference number: 3 (lower is better)
Translates to: LSGSTILHSHQQ*TRVSVSLHPGQ
Trigger: TTGGCCAGGGTGTAGAGAAACTGACACCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp GGAGGCTTCTATGAGTGCCATGGCAGGGGAAGAGACTaGTTGGAAAGCTTGAATCCTCTCTCATACGTTATT +
Preference number: 3 (lower is better)
Translates to: GGFYECHGRGRD*LESLNPLSYVI
Trigger: AATAACGTATGAGAGAGGATTCAAGCTTTCCAAGCAGTCTCTTCCCCTGCCATGGCACTCATAGAAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp AGCTGGGCTACATTAAACCTGAAGCTCTGTACAATGTaGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: SWATLNLKLCTM*RAVLPSLQVVQ
Trigger: CTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR CCA 72 bp GTGGAGTCTTTCCTGGAACAACTCTACAGACTGATTTaGGCATTTGTTCCTGGTGGGCTAGCCTCTAAATCC +
Preference number: 3 (lower is better)
Translates to: VESFLEQLYRLI*AFVPGGLASKS
Trigger: GGATTTAGAGGCTAGCCCACCAGGAACAAATGCCCAAATCAGTCTGTAGAGTTGTTCCAGGAAAGACTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp TTGGGTGTGAAGGATCCATCCATAAGTCGCCAGAATTaGATCGCAAATATCCTAGAGCTGACGATCTCCTGG +
Preference number: 3 (lower is better)
Translates to: LGVKDPSISRQN*IANILELTISW
Trigger: CCAGGAGATCGTCAGCTCTAGGATATTTGCGATCCAATTCTGGCGACTTATGGATGGATCCTTCACACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATACAAGTGGTGCAGCATaGGATTTTCAAGTAAGTCTA +
Preference number: 3 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDTSGAA*DFQVSL
Trigger: TAGACTTACTTGAAAATCCAATGCTGCACCACTTGT...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGATGTGGAGAGCGGTGTaGCCTTCATTACAAGTGGTG +
Preference number: 3 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRMWRAV*PSLQVV
Trigger: CACCACTTGTAATGAAGGCAACACCGCTCTCCACAT...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCGTGACATTAATAGCTTaGGAGATGGTGTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLVTLIA*EMVSSS
Trigger: AGAGGAAGACACCATCTCCAAAGCTATTAATGTCAC...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCGATCATTGCAGTAGATaGTGGGACCCTGCTATAAAT +
Preference number: 3 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLDHCSR*WDPAIN
Trigger: ATTTATAGCAGGGTCCCACAATCTACTGCAATGATC...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACACAAGTGGTGCAGCATaGGATTTTCAAGTAAGTCTA +
Preference number: 3 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDTSGAA*DFQVSL
Trigger: TAGACTTACTTGAAAATCCAATGCTGCACCACTTGT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CAA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGATAAGCTCCTTGAAATaGGGGGCAGAACACCTCAAG +
Preference number: 3 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGISSLK*GAEHLK
Trigger: CTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTAT...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp TTCCTCACCTACCATACTGATATTGAATGTTTAGCTTaGAGTTATCGGCCCCAGGACCCAGCCACTGGCAAA +
Preference number: 3 (lower is better)
Translates to: FLTYHTDIECLA*SYRPQDPATGK
Trigger: TTTGCCAGTGGCTGGGTCCTGGGGCCGATAACTTCAAGCTAAACATTCAATATCAGTATGGTAGGTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp GGCATGAGCACAGTAGCTTCTGGGATGCTGATAATGTaGTATTGCTTAAACTGGGTGGTGGATACATCAGTG +
Preference number: 3 (lower is better)
Translates to: GMSTVASGMLIM*YCLNWVVDTSV
Trigger: CACTGATGTATCCACCACCCAGTTTAAGCAATAGCACATTATCAGCATCCCAGAAGCTACTGTGCTCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp CAAAGAAAAAGAAGTTGTGGTTGTGAGGTACACAACTaGGTGAGAACCACAAGGCCATGTTCTGCTGATGGC +
Preference number: 3 (lower is better)
Translates to: QRKRSCGCEVHN*VRTTRPCSADG
Trigger: GCCATCAGCAGAACATGGCCTTGTGGTTCTCACCCAGTTGTGTACCTCACAACCACAACTTCTTTTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp GCTTCTGGGATGCTGATAATGTGCTATTGCTTAAACTaGGTGGTGGATACATCAGTGTGTCAGCTCGTGAGA +
Preference number: 3 (lower is better)
Translates to: ASGMLIMCYCLN*VVDTSVCQLVR
Trigger: TCTCACGAGCTGACACACTGATGTATCCACCACCCAGTTTAAGCAATAGCACATTATCAGCATCCCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp GTTCCAGGAAATAGTGGAACCAACTCAAGAGAAAAGTaGAGTGAGTCCCCAGAGATCTTAGGCTCTCAGCTA +
Preference number: 3 (lower is better)
Translates to: VPGNSGTNSREK*SESPEILGSQL
Trigger: TAGCTGAGAGCCTAAGATCTCTGGGGACTCACTCCACTTTTCTCTTGAGTTGGTTCCACTATTTCCTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAACAAGTGGTGCAGCATaGGATTTTCAAGTAAGTCTA +
Preference number: 3 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRTSGAA*DFQVSL
Trigger: TAGACTTACTTGAAAATCCAATGCTGCACCACTTGT...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR-3UTR CAA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCGACACCTCTGGCCCTTaGATGCCCTCTGTTAACATC +
Preference number: 3 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATDTSGP*MPSVNI
Trigger: GATGTTAACAGAGGGCATCAAAGGGCCAGAGGTGTC...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGTGCAGTTCCTTCTGCTaGGGTCTTTCTCTTCCTTTT +
Preference number: 3 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGCSSFC*GLSLPF
Trigger: AAAAGGAAGAGAAAGACCCAAGCAGAAGGAACTGCA...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp GTAGCTCTTAGATGGGCGTGCAATTGGCTGCCAGTTTaGAATGAAACCAAGAAGGAAATTAATGGTGGGCCA +
Preference number: 3 (lower is better)
Translates to: VALRWACNWLPV*NETKKEINGGP
Trigger: TGGCCCACCATTAATTTCCTTCTTGGTTTCATTTCAAACTGGCAGCCAATTGCACGCCCATCTAAGAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR GCA 72 bp AGCACAGTAGCTTCTGGGATGCTGATAATGTGCTATTaGTTAAACTGGGTGGTGGATACATCAGTGTGTCAG +
Preference number: 3 (lower is better)
Translates to: STVASGMLIMCY*LNWVVDTSVCQ
Trigger: CTGACACACTGATGTATCCACCACCCAGTTTAAGCAATAGCACATTATCAGCATCCCAGAAGCTACTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp GTTGGTAACATTTTCACCAGCCTCCTCCTATTAAACTaGAGTGATGCAGCAGCAGCCCAAAGCCATAGAAAA +
Preference number: 3 (lower is better)
Translates to: VGNIFTSLLLLN*SDAAAAQSHRK
Trigger: TTTTCTATGGCTTTGGGCTGCTGCTGCATCACTGCAGTTTAATAGGAGGAGGCTGGTGAAAATGTTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp TTTCCTAGAGAAATGTGTTCTTTCGCCATTGACCCCTaGCAGTTGGTAACATTTTCACCAGCCTCCTCCTAT +
Preference number: 3 (lower is better)
Translates to: FPREMCSFAIDP*QLVTFSPASSY
Trigger: ATAGGAGGAGGCTGGTGAAAATGTTACCAACTGCCAGGGGTCAATGGCGAAAGAACACATTTCTCTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGTGTCATTGTACAATTTaGAATGTGCCACTGGACCAC +
Preference number: 3 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGCHCTI*NVPLDH
Trigger: GTGGTCCAGTGGCACATTCAAAATTGTACAATGACA...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp AGCCAGATTATGTTGTACGAAGATGTGCAAAGCTGTTaGATGGTGTTGACACTGAACGTGAACATGGAGCTC +
Preference number: 3 (lower is better)
Translates to: SQIMLYEDVQSC*MVLTLNVNMEL
Trigger: GAGCTCCATGTTCACGTTCAGTGTCAACACCATTCAACAGCTTTGCACATCTTCGTACAACATAATCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp ACCGCAATTGATCAAACCGACAGGAAAGGACAATACTaGTTTAATTACGCGGGCAGCAGTTACCCTTCAGTA +
Preference number: 3 (lower is better)
Translates to: TAIDQTDRKGQY*FNYAGSSYPSV
Trigger: TACTGAAGGGTAACTGCTGCCCGCGTAATTAAATCAGTATTGTCCTTTCCTGTCGGTTTGATCAATTGCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp CAACTTTGCTGGAAAACAGGTCGGCAATATTTGTCATaGGCCTTACAGATAATTGCATCCTCTGACCCAGTG +
Preference number: 3 (lower is better)
Translates to: QLCWKTGRQYLS*ALQIIASSDPV
Trigger: CACTGGGTCAGAGGATGCAATTATCTGTAAGGCTCATGACAAATATTGCCGACCTGTTTTCCAGCAAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp TCTTGCTTATGGTGGTACAGTCACAGTGAATGTGTTTaGCTCTTTAACCACGTGAGCATGGTCCTGTTTTCC +
Preference number: 3 (lower is better)
Translates to: SCLWWYSHSECV*LFNHVSMVLFS
Trigger: GGAAAACAGGACCATGCTCACGTGGTTAAAGAGTCAAACACATTCACTGTGACTGTACCACCATAAGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp CGAGTCCAAACAATTCTCCAGGATGACCATCCTCCATaGAGTGACTTAACAGTCTGTGCTTTTCTAGCATTA +
Preference number: 3 (lower is better)
Translates to: RVQTILQDDHPP*SDLTVCAFLAL
Trigger: TAATGCTAGAAAAGCACAGACTGTTAAGTCACTGCATGGAGGATGGTCATCCTGGAGAATTGTTTGGACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp TGGAGTGAGTCCCCAGAGATCTTAGGCTCTCAGCTATaGAGTAGACTTAGAGAACAACTTATCCATACTGAA +
Preference number: 3 (lower is better)
Translates to: WSESPEILGSQL*SRLREQLIHTE
Trigger: TTCAGTATGGATAAGTTGTTCTCTAAGTCTACTGCATAGCTGAGAGCCTAAGATCTCTGGGGACTCACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTTTTCTAGGCAGTTATaGAATAACGGATCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGFSRQL*NNGSLE
Trigger: CTCCAAAGATCCGTTATTCAATAACTGCCTAGAAAA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp CCAGTCCAAAAGGCTGACTTGATGAATCTCCTTCAGTaGGTTCTATGGATGGGATGTGAACACACAGTTATA +
Preference number: 3 (lower is better)
Translates to: PVQKADLMNLLQ*VLWMGCEHTVI
Trigger: TATAACTGTGTGTTCACATCCCATCCATAGAACTCACTGAAGGAGATTCATCAAGTCAGCCTTTTGGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp TGTCATTGTACAATTTTGAATGTGCCACTGGACCACTaGAGATGTTTCCTTCTCTCCTGGCTTATTGGCACA +
Preference number: 3 (lower is better)
Translates to: CHCTILNVPLDH*RCFLLSWLIGT
Trigger: TGTGCCAATAAGCCAGGAGAGAAGGAAACATCTTCAGTGGTCCAGTGGCACATTCAAAATTGTACAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp CTACACCCTGGCCAATACTTGTTATTTTCTGGAGTTTaGTCATTTGAGAGTGGCCATCCTAATGGGTATGAG +
Preference number: 3 (lower is better)
Translates to: LHPGQYLLFSGV*SFESGHPNGYE
Trigger: CTCATACCCATTAGGATGGCCACTCTCAAATGATCAAACTCCAGAAAATAACAAGTATTGGCCAGGGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp TGGAGTCTGGTACTCAATACATGTTGGCTATTGACATaGAACGTGTTGAGGAAAACGATGTCAGTACATGGT +
Preference number: 3 (lower is better)
Translates to: WSLVLNTCWLLT*NVLRKTMSVHG
Trigger: ACCATGTACTGACATCGTTTTCCTCAACACGTTGCATGTCAATAGCCAACATGTATTGAGTACCAGACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp GTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTaGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGT +
Preference number: 3 (lower is better)
Translates to: VQCGERCCLHYK*CSIGFSSKSKC
Trigger: ACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR CCA 72 bp CCACTGATAACTGTTCACGATCATTGCAGTAGATTGTaGGACCCTGCTATAAATTATTCTACAGGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: PLITVHDHCSRL*DPAINYSTGGS
Trigger: TGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCAATGATCGTGAACAGTTATCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CCA 72 bp CCATGCCTCAGTTTCCCAATATTTTCCAGGGCTATATaGCCTGTGGATAGAATTTACCATCATTCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: PCLSFPIFSRAI*PVDRIYHHSVL
Trigger: AAGCACAGAATGATGGTAAATTCTATCCACAGGCCATATAGCCCTGGAAAATATTGGGAAACTGAGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp CCAACAGTGCACAAGGGTGTCAGTTTCTCTACACCCTaGCCAATACTTGTTATTTTCTGGAGTTTGATCATT +
Preference number: 3 (lower is better)
Translates to: PTVHKGVSFSTP*PILVIFWSLII
Trigger: AATGATCAAACTCCAGAAAATAACAAGTATTGGCCAGGGTGTAGAGAAACTGACACCCTTGTGCACTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAACAATTGCAAGTCTTTaGCATGAGCTAAACCCCGCT +
Preference number: 3 (lower is better)
Translates to: IDKMLIGLQVISAAASRRTIASL*HELNPA
Trigger: AGCGGGGTTTAGCTCATGCAAAAGACTTGCAATTGT...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR-3UTR CAA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTTTCTAGGCAGTTATaGAATAACGGATCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRFSRQL*NNGSLE
Trigger: CTCCAAAGATCCGTTATTCAATAACTGCCTAGAAAA...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp ATCCATTCATGGGTTGCTTCTCTCTTGTGGCTATTGTaGATTAAGCTGCGTGAACATGAGTGTGCAAATATC +
Preference number: 3 (lower is better)
Translates to: IHSWVASLLWLL*IKLREHECANI
Trigger: GATATTTGCACACTCATGTTCACGCAGCTTAATTCACAATAGCCACAAGAGAGAAGCAACCCATGAATGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp GGGTTGCTTCTCTCTTGTGGCTATTGTGAATTAAGCTaGGTGAACATGAGTGTGCAAATATCTCTTCTGTTT +
Preference number: 3 (lower is better)
Translates to: GLLLSCGYCELS*VNMSVQISLLF
Trigger: AAACAGAAGAGATATTTGCACACTCATGTTCACGCAGCTTAATTCACAATAGCCACAAGAGAGAAGCAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp GTGCTCATACCCTTTCATCCTGTAGATGAGTACCCTTaGGTATCCATCACAAGGAATAGGATGATAGAAAAT +
Preference number: 3 (lower is better)
Translates to: VLIPFHPVDEYP*VSITRNRMIEN
Trigger: ATTTTCTATCATCCTATTCCTTGTGATGGATACCCAAGGGTACTCATCTACAGGATGAAAGGGTATGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp CAAGTAAATCTAGGGCTGGGTCATTTCCACTTACACTaGGAATTACTAGGAGGACATATTTTTCCTCCTTTC +
Preference number: 3 (lower is better)
Translates to: QVNLGLGHFHLH*ELLGGHIFPPF
Trigger: GAAAGGAGGAAAAATATGTCCTCCTAGTAATTCCCAGTGTAAGTGGAAATGACCCAGCCCTAGATTTACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGAGCCAGCAAACACCCTaGCTCTGCCTTTCTAAGATT +
Preference number: 3 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLSQQTP*LCLSKI
Trigger: AATCTTAGAAAGGCAGAGCAAGGGTGTTTGCTGGCT...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR-3UTR CAA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTTTCTCTCCTGGCTTATaGGCACAATCATCCACTTGC +
Preference number: 3 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAFSPGL*AQSSTC
Trigger: GCAAGTGGATGATTGTGCCAATAAGCCAGGAGAGAA...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp AATCTGAAGACATTTAATAAACCAAGTAAGGAGAGGTaGGTCTTTACTGAGTCCTCACTCACTCTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: NLKTFNKPSKER*VFTESSLTLRS
Trigger: TGACCTCAGAGTGAGTGAGGACTCAGTAAAGACTCACCTCTCCTTACTTGGTTTATTAAATGTCTTCAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp TTCGGTAGCAACACTGATGCAACATCTCCAAAATCCTaGGGGGAAATGATTCATAATGCTAGAGAGAATAGA +
Preference number: 3 (lower is better)
Translates to: FGSNTDATSPKS*GEMIHNARENR
Trigger: TCTATTCTCTCTAGCATTATGAATCATTTCCCCTCAGGATTTTGGAGATGTTGCATCAGTGTTGCTACCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp GGAGCACTATATCCACTGATAACTGTTCACGATCATTaGAGTAGATTGTGGGACCCTGCTATAAATTATTCT +
Preference number: 3 (lower is better)
Translates to: GALYPLITVHDH*SRLWDPAINYS
Trigger: AGAATAATTTATAGCAGGGTCCCACAATCTACTGCAATGATCGTGAACAGTTATCAGTGGATATAGTGCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR GCA 72 bp GCGGCAGACATTGAATTCATTTCAGTTCCGCCGATTTaGTATTTAGTTAGTGATGCATTAGGCTTGAAGATA +
Preference number: 3 (lower is better)
Translates to: AADIEFISVPPI*YLVSDALGLKI
Trigger: TATCTTCAAGCCTAATGCATCACTAACTAAATAGCAAATCGGCGGAACTGAAATGAATTCAATGTCTGCCGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp TACATACTGTATGAACCCATTTATAGAAAGCTAAGATaGCAGGCAAAACTACACCATGGTGTGATTAGTCAG +
Preference number: 3 (lower is better)
Translates to: YILYEPIYRKLR*QAKLHHGVISQ
Trigger: CTGACTAATCACACCATGGTGTAGTTTTGCCTGTCATCTTAGCTTTCTATAAATGGGTTCATACAGTATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp TGTCAGAGACAGAAGATTAGAACAATACACCATCATTaGGAGGGTAATTCATCAAAAGTCCTAACTTCAGCT +
Preference number: 3 (lower is better)
Translates to: CQRQKIRTIHHH*EGNSSKVLTSA
Trigger: AGCTGAAGTTAGGACTTTTGATGAATTACCCTCTCAATGATGGTGTATTGTTCTAATCTTCTGTCTCTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp GACCATGTTTTATACTCGTGTACTGTTATGCATTACTaGCAGGGATGTAAATTTGTACAACTTTGCTGGAAA +
Preference number: 3 (lower is better)
Translates to: DHVLYSCTVMHY*QGCKFVQLCWK
Trigger: TTTCCAGCAAAGTTGTACAAATTTACATCCCTGCCAGTAATGCATAACAGTACACGAGTATAAAACATGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp ATCTCTTCCTGCAATAGAATGACTACACTGGCAAACTaGGGTAGAGATCAAAGTAATGATCTTGATTTTAGT +
Preference number: 3 (lower is better)
Translates to: ISSCNRMTTLAN*GRDQSNDLDFS
Trigger: ACTAAAATCAAGATCATTACTTTGATCTCTACCTCAGTTTGCCAGTGTAGTCATTCTATTGCAGGAAGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp ATGGAATGTCTCAAAATACACTCTCAATCAGGAAGCTaGTTAAGGATATACTGTGTTAAATCTAGGTCAGTC +
Preference number: 3 (lower is better)
Translates to: MECLKIHSQSGS*LRIYCVKSRSV
Trigger: GACTGACCTAGATTTAACACAGTATATCCTTAATCAGCTTCCTGATTGAGAGTGTATTTTGAGACATTCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp AGCTTCAAGTCCATCTGCCTCCTAGACTTCTCCACTTaGAAGTCTAATACCTATCTTAAATTAAATAAATTC +
Preference number: 3 (lower is better)
Translates to: SFKSICLLDFST*KSNTYLKLNKF
Trigger: GAATTTATTTAATTTAAGATAGGTATTAGACTTCCAAGTGGAGAAGTCTAGGAGGCAGATGGACTTGAAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp AGGGAAAAGAAGACTTTCCAGAATCAAAGTGTAAGATaGGCTGAAATGGTCTTCAGTACAATGAATCAAAAT +
Preference number: 3 (lower is better)
Translates to: REKKTFQNQSVR*AEMVFSTMNQN
Trigger: ATTTTGATTCATTGTACTGAAGACCATTTCAGCCCATCTTACACTTTGATTCTGGAAAGTCTTCTTTTCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR TCA 72 bp TTATTTATTATAAAGATACACCGTGAAGAACAAACCTaGCTGTATACTGAAGCCTGTAATGGTACATGCCAA +
Preference number: 3 (lower is better)
Translates to: LFIIKIHREEQT*LYTEACNGTCQ
Trigger: TTGGCATGTACCATTACAGGCTTCAGTATACAGTCAGGTTTGTTCTTCACGGTGTATCTTTATAATAAATAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR TCA 72 bp AATATACCACATTTGCTTATTCATTTGTCCCTCTGTTaGTGGACATTTGCATTGCTTCTATCATTTGGCTAT +
Preference number: 3 (lower is better)
Translates to: NIPHLLIHLSLC*WTFALLLSFGY
Trigger: ATAGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCAAATGTGGTATATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp GTGTGTCAGCTCGTGAGAACTGTTACACTAATGATTTaGACACTTTTGTTAGTATTCTGCACTTTAATAAAA +
Preference number: 3 (lower is better)
Translates to: VCQLVRTVTLMI*TLLLVFCTLIK
Trigger: TTTTATTAAAGTGCAGAATACTAACAAAAGTGTGCAAATCATTAGTGTAACAGTTCTCACGAGCTGACACAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR GCA 72 bp AGAAACATGACCATGTTTTATACTCGTGTACTGTTATaGATTACTGGCAGGGATGTAAATTTGTACAACTTT +
Preference number: 3 (lower is better)
Translates to: RNMTMFYTRVLL*ITGRDVNLYNF
Trigger: AAAGTTGTACAAATTTACATCCCTGCCAGTAATGCATAACAGTACACGAGTATAAAACATGGTCATGTTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CCA 72 bp CAATTTATTCAAATGAAACCAAAGATGGGCTTGCCGTaGTTAACTAGAGTCTTTCTCAAAAGAAAGATTTCA +
Preference number: 3 (lower is better)
Translates to: QFIQMKPKMGLP*LTRVFLKRKIS
Trigger: TGAAATCTTTCTTTTGAGAAAGACTCTAGTTAACCACGGCAAGCCCATCTTTGGTTTCATTTGAATAAATTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGACCCTGCACCAAGCCTaGCTCTCCAGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRTLHQA*LSSPAG
Trigger: TCCAGCTGGGCTGGAGAGTCAGGCTTGGTGCAGGGT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCTGGAGTGCCGTGGCGTaGCCTTGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGWSAVA*PWLTAT
Trigger: GGTTGCAGTGAGCCAAGGTCACGCCACGGCACTCCA...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGAACGGGAGGCTTCTATaGGTGCCATGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRNGRLL*VPWQGK
Trigger: CTTCCCCTGCCATGGCACTCATAGAAGCCTCCCGTT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGGATGGAGTCTCACTGTaGCGCCCAGGCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRDGVSL*RPGCSA
Trigger: TGCACTACAGCCTGGGCGGCACAGTGAGACTCCATC...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGGTGGCTTGTGGTCATTaGAGCCCGTGTATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRVACGH*SPCIAL
Trigger: CAGGGCAATACACGGGCTTCAATGACCACAAGCCAC...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGCCACCAGTCCTCAGATaGACGGTGATACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRPPVLR*TVIQQQ
Trigger: CTGCTGCTGTATCACCGTGCATCTGAGGACTGGTGG...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGATGGGCAGGGCCCTGTaGAGGACACCCTATTTCCAA +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRMGRAL*RTPYFQ
Trigger: TTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCAT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGGCCAGCTGGGAGGTTTaGGGAACCCTTCATGAAGGA +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRASWEV*GTLHEG
Trigger: TCCTTCATGAAGGGTTCCCCAAACCTCCCAGCTGGC...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp CCTGCACCAAGCCTGACTCTCCAGCCCAGCTGGAGCTaGTGTTCTCAACTTGGGAGGTGGGTGGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PAPSLTLQPSWS*CSQLGRWVAGG
Trigger: ACCACCTGCCACCCACCTCCCAAGTTGAGAACACAAGCTCCAGCTGGGCTGGAGAGTCAGGCTTGGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGACAGAGCTTCGCCGTTaGTGTCTCTCCTCTAGTCGA +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRTELRR*CLSSSR
Trigger: TCGACTAGAGGAGAGACATCAACGGCGAAGCTCTGT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGCCAGAAATCCTCCCCTaGGCTTCAAGTCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRPEILP*ASSPSA
Trigger: GGCAGATGGACTTGAAGCTCAGGGGAGGATTTCTGG...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGCTCAAGCAATCTTCCTaGCTCAGCCTCCCAAGTACC +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRLKQSS*LSLPST
Trigger: GGTACTTGGGAGGCTGAGGCAGGAAGATTGCTTGAG...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGCCGAGGTCGCGCCACTaGACTCCAGCCTGGGAGACG +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLPRSRH*TPAWET
Trigger: CGTCTCCCAGGCTGGAGTGCAGTGGCGCGACCTCGG...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGCCGAAGAGGAGGTGGTaGGCAGGAAGGCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRPKRRW*AGRLKW
Trigger: CCATTTCAGCCTTCCTGCTCACCACCTCCTCTTCGG...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGAGGCAGAGGTTGCGGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRRQRLR*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACCGCAACCTCTGCCT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCCACTGGAGGAGCTCGTaGTACGTCGAATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGHWRSS*YVESEA
Trigger: AGCCTCAGATTCGACGTAGCACGAGCTCCTCCAGTG...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGCACGCCCATTCTGGGTaGCACCATAGGCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRHAHSG*HHRLES
Trigger: ACTTTCAAGCCTATGGTGGCACCCAGAATGGGCGTG...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTCCGGGAGGCAGAGGTTaGGGTGAGCCGAGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVPGGRG*GEPRSW
Trigger: CCACGACCTCGGCTCACCGCAACCTCTGCCTCCCGG...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGTGCTGGGCACTGACCTaGCACACCTCATCACCCATG +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRCWALT*HTSSPM
Trigger: CATGGGTGATGAGGTGTGCCAGGTCAGTGCCCAGCA...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCAAAGAAGTGGTGGAATaGCCGGGCATGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGKEVVE*PGMVAH
Trigger: GTGAGCCACCATGCCCGGCCATTCCACCACTTCTTT...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCGTAATGCCAACAGTTTaGGAGACCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGVMPTV*ETEAGG
Trigger: TCCACCCGCCTCGGTCTCCCAAACTGTTGGCATTAC...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGGAAGATGACATTTCCTaGCCTCCCTTGCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMREDDIS*PPLPCD
Trigger: GTCACATGGCAAGGGAGGCCAGGAAATGTCATCTTC...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGGTTCATGTCCTTGGATaGGGACTTGTCTTCCGTGAC +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRVHVLG*GLVFRD
Trigger: GTCACGGAAGACAAGTCCTCATCCAAGGACATGAAC...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGGAGTCGTGCCGGCTaGTGTTGGTCAGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGSRAG*CWSGCH
Trigger: ATGGCAGCCTGACCAACATCAGCCGGCACGACTCCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGAGTCCTCACTCACTCTaGGGTCATACCCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRSPHSL*GHTLHL
Trigger: CAAATGAAGGGTATGACCTCAGAGTGAGTGAGGACT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGGAGGTGAGTCTTTACTaGGTCCTCACTCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGREVSLY*VLTHSE
Trigger: CTCAGAGTGAGTGAGGACTCAGTAAAGACTCACCTC...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGAAGTATCCTTGCCTTTaGGTAGGCCTTCCGGTCAAC +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRKYPCL*VGLPVN
Trigger: GTTGACCGGAAGGCCTACTCAAAGGCAAGGATACTT...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGACTCTGGTTCGGGAGTaGGAGATGGGGAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKTLVRE*EMGRQA
Trigger: CGCCTGCCTCCCCATCTCTCACTCCCGAACCAGAGT...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACTGCCATGGCCAGGCCTaGGCCTCCGCTCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDCHGQA*ASAQDC
Trigger: ACAGTCCTGAGCGGAGGCGCAGGCCTGGCCATGGCA...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCTGCCATGGCCAGGCCTaGGCCTCCGCTCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSACHGQA*ASAQDC
Trigger: ACAGTCCTGAGCGGAGGCGCAGGCCTGGCCATGGCA...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCATCAGGGGCATGCTTTaGTGTGCTCTGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGIRGML*CALSLQ
Trigger: CTGGAGAGACAGAGCACAGCAAAGCATGCCCCTGAT...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGGCTGGAGGCTTCAGCTaGACGCCCATTCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKAGGFS*TPILGA
Trigger: GGCACCCAGAATGGGCGTGCAGCTGAAGCCTCCAGC...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGACTTCACTGATTCTGTaGAACGACTGTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRTSLIL*NDCAGS
Trigger: GCTTCCAGCACAGTCGTTCCACAGAATCAGTGAAGT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGGACAGGCATCAATGTTaGGCCAAAGCAAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRDRHQC*AKANGQ
Trigger: CTGGCCATTTGCTTTGGCCCAACATTGATGCCTGTC...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACGCCAGGACGCCTTACTaGAGGGGGTGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDARTPY*RGWLSS
Trigger: AGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGC...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGCCAGGACGCCTTACTaGAGGGGGTGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWARTPY*RGWLSS
Trigger: AGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGGTTAGAAAGGGCATGTaGAGGGTGGAGCGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRVRKGM*RVERAM
Trigger: CATTGCCCGCTCCACCCTCCACATGCCCTTTCTAAC...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTGGTCAGGCTGCCATaGCCAGGCCTGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPLVRLP*PGLRLR
Trigger: GCGGAGGCGCAGGCCTGGCCATGGCAGCCTGACCAA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGTACTCATTGTGTCACTaGAGGAGCTCGTGCTACGTC +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRYSLCH*RSSCYV
Trigger: GACGTAGCACGAGCTCCTCCAGTGACACAATGAGTA...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGGGGGACTGATGCGGTaGGATGGGAGGACACAGGGG +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAGGLMR*DGRTQG
Trigger: CCCCTGTGTCCTCCCATCCCACCGCATCAGTCCCCC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGACAGCCACACCACCGTaGAAGCTACGGCAATCGTTG +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRTATPP*KLRQSL
Trigger: CAACGATTGCCGTAGCTTCCACGGTGGTGTGGCTGT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATCACTGCACTCCAGCCTaGGAGACGGAGCGGGACTAC +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDHCTPA*ETERDY
Trigger: GTAGTCCCGCTCCGTCTCCCAGGCTGGAGTGCAGTG...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGAGATCCTGGAGAAGCTaGACTCGCATCTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRRSWRS*TRISVC
Trigger: GCAAACGGAGATGCGAGTTCAGCTTCTCCAGGATCT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGCTGTACTGTGATAGATaGTTGAGGAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRLYCDR*LRKAKR
Trigger: CCTCTTTGCCTTCCTCAATCATCTATCACAGTACAG...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAACCCTGCACCAAGCCTaGCTCTCCAGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSTLHQA*LSSPAG
Trigger: TCCAGCTGGGCTGGAGAGTCAGGCTTGGTGCAGGGT...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGGAGGGAATGAAATGGTaGGAGGCAGTACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLREGMKW*EAVQST
Trigger: CGTGCTCTGTACTGCCTCTCACCATTTCATTCCCTC...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGCGTGTGTACTATCGCTaGTCTTTCCATGTAACACCC +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRRVYYR*SFHVTP
Trigger: GGGTGTTACATGGAAAGATCAGCGATAGTACACACG...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCCTGAGCATGAGCTCTaGCTGGACTGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWPEHEL*LDWLLG
Trigger: GCCCAGCAGCCAGTCCAGGCAGAGCTCATGCTCAGG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGCCATCACTGGTCCTaGCAGGACGCCTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGHHWS*QDALLE
Trigger: CTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGCTGGAGGCTTCAGCTaGACGCCCATTCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWAGGFS*TPILGA
Trigger: GGCACCCAGAATGGGCGTGCAGCTGAAGCCTCCAGC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGAGCATGAGCTCTGCCTaGACTGGCTGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWSMSSA*TGCWAL
Trigger: CAGTGCCCAGCAGCCAGTCCAGGCAGAGCTCATGCT...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGGGGTCCAGTGGCTTGTaGTCATTGAAGCCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRGSSGL*SLKPVY
Trigger: ATACACGGGCTTCAATGACCACAAGCCACTGGACCC...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCCACTGTGCCCGGCCCTaGGTTCTTTTTCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGHCARP*VLFLAL
Trigger: TAATGCAAGAAAAAGAACCCAGGGCCGGGCACAGTG...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACTGGCTGCTGGGCACTaGCCTGGCACACCTCATCAC +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRLAAGH*PGTPHH
Trigger: GTGATGAGGTGTGCCAGGTCAGTGCCCAGCAGCCAG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGACTGTGATAGATGATTaGGGAAGGCAAAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRTVIDD*GRQRGT
Trigger: GGTACCTCTTTGCCTTCCTCAATCATCTATCACAGT...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGTCCTCAGATGCACGGTaGTACAGCAGCAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWSSDAR*YSSREA
Trigger: TGCCTCCCTGCTGCTGTATCACCGTGCATCTGAGGA...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGGACCAGATAGAAGGCTaGATAAATGAACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRDQIEG*INEQVG
Trigger: TCCTACCTGTTCATTTATTCAGCCTTCTATCTGGTC...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAAGGCACAGCCTGTaGGGCTCTGCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSATRHSL*GSAAAR
Trigger: TCGTGCTGCTGCAGAGCCTCACAGGCTGTGCCTTGT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCCCAAGTAAGGAGAGGTaGGTCTTTACTGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGPSKER*VFTESS
Trigger: TGAGGACTCAGTAAAGACTCACCTCTCCTTACTTGG...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGATGAATCTCCTTCAGTaGGTTCTATGGATGGGATGT +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRMNLLQ*VLWMGC
Trigger: ACATCCCATCCATAGAACTCACTGAAGGAGATTCAT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGGACCGACAGGGAGGTaGGATGGGACATTACTGAGC +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWGPTGR*DGTLLS
Trigger: GCTCAGTAATGTCCCATCTCACCTCCCTGTCGGTCC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGGCAGGAGAATCGCTTaGATCCAGGAGGGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWGRRIA*IQEGEV
Trigger: AACCTCCCCCTCCTGGATTCAAGCGATTCTCCTGCC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGGGTGAGCAGGAAGGCTaGAATGGCAGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKGEQEG*NGRLRS
Trigger: TGACCTCAGCCTGCCATTTCAGCCTTCCTGCTCACC...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGTCTGAAGGAGTGTTaGGGGGTGGGAAAGCCACCT +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGLKEC*GVGKPP
Trigger: AGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGGCCATCACTGGTCCTaGCAGGACGCCTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWGHHWS*QDALLE
Trigger: CTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGCAGCAGCACGACTCCTaGCGGCCAAGACAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQQQHDS*RPRQQS
Trigger: ACTTTGCTGTCTTGGCCGGCAGGAGTCGTGCTGCTG...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAGTAGTATGCCGTCCTaGAGCAGTGGGGACCCACGT +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLSSMPS*SSGDPR
Trigger: ACGTGGGTCCCCACTGCTGCAGGACGGCATACTACT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTCCTCTAGTCGAATATaGAAGACTGGATCACCAGAT +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRSSSRI*KTGSPD
Trigger: ATCTGGTGATCCAGTCTTCCATATTCGACTAGAGGA...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGAGCATGAGCTCTGCCTaGACTGGCTGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWSMSSA*TGCWAL
Trigger: CAGTGCCCAGCAGCCAGTCCAGGCAGAGCTCATGCT...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGGGGAGTTCATGTCCTTaGATGAGGACTTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRGSSCP*MRTCLP
Trigger: CGGAAGACAAGTCCTCATCCAAGGACATGAACTCCC...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATGGCAATGGCCATCACTaGTCCTGCCAGGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDGNGHH*SCQDAL
Trigger: TAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCC...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTGGTCAGGCTGCCATaGCCAGGCCTGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRLVRLP*PGLRLR
Trigger: GCGGAGGCGCAGGCCTGGCCATGGCAGCCTGACCAA...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCAAAGAAGTGGTGGAATaGCCGGGCATGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLKEVVE*PGMVAH
Trigger: GTGAGCCACCATGCCCGGCCATTCCACCACTTCTTT...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCATTTTAAAGAAGTGGTaGAATGGCCGGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGILKKW*NGRAWW
Trigger: CCACCATGCCCGGCCATTCCACCACTTCTTTAAAAT...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATTCTCAACTTGGGAGGTaGGTGGCAGGTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDSQLGR*VAGGLE
Trigger: CTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGA...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCGGGGGACTGATGCGGTaGGATGGGAGGACACAGGGG +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGGGLMR*DGRTQG
Trigger: CCCCTGTGTCCTCCCATCCCACCGCATCAGTCCCCC...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTCCAGCCTGGCCAACATaGCGAAACCCCGGCTGTACT +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVPAWPT*RNPGCT
Trigger: AGTACAGCCGGGGTTTCGCCATGTTGGCCAGGCTGG...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGAGCCACCTCACTCTATaGGAAGGCGTGTGTACTATC +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRSHLTL*EGVCTI
Trigger: GATAGTACACACGCCTTCCCATAGAGTGAGGTGGCT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTGGGAGTCGTGCCGGCTaGTGTTGGTCAGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIGSRAG*CWSGCH
Trigger: ATGGCAGCCTGACCAACATCAGCCGGCACGACTCCC...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATGGGAGTCGTGCCGGCTaGTGTTGGTCAGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNGSRAG*CWSGCH
Trigger: ATGGCAGCCTGACCAACATCAGCCGGCACGACTCCC...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAGAGGCTCGGAGCTCCTaGGGGCAACGTTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHREARSS*GQRCAK
Trigger: CTTTGCACAACGTTGCCCTCAGGAGCTCCGAGCCTC...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACAAGGCCATGTTCTGCTaGTGGCCCTGCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDKAMFC*WPCMAL
Trigger: AAGAGCCATGCAGGGCCATCAGCAGAACATGGCCTT...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGGTGTCCAAGGGTGCTaGAGGACCCCAAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAGVQGC*RTPKAQ
Trigger: CTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACACAAGGCACAGCCTGTaGGGCTCTGCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYTRHSL*GSAAAR
Trigger: TCGTGCTGCTGCAGAGCCTCACAGGCTGTGCCTTGT...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTTGGATTTCCAAGGCTaGTCAGATGAAAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRLDFQG*SDESFF
Trigger: GAAGAAACTTTCATCTGATCAGCCTTGGAAATCCAA...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCAGGAAAGGACAATACTaGTTTAATTACGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGRKGQY*FNYAGS
Trigger: GCTGCCCGCGTAATTAAATCAGTATTGTCCTTTCCT...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTCCTGAGCATGAGCTCTaGCTGGACTGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIPEHEL*LDWLLG
Trigger: GCCCAGCAGCCAGTCCAGGCAGAGCTCATGCTCAGG...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGCCTGTGTGCTAGGATaGCAGAGAAAGAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWACVLG*QRKRVS
Trigger: GGAGACCCTCTTTCTCTGGCATCCTAGCACACAGGC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGGGGGGCATTCACAAATaGACGGTTCATATATTTTCT +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRGGIHK*TVHIFS
Trigger: AGAAAATATATGAACCGTGCATTTGTGAATGCCCCC...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCACGGGCGAATGCGATaGTGTCAGCAGCACATGAGC +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWHGRMR*CQQHMS
Trigger: GCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTTCCTTCTGTCTCCTCTaGCAGCTCCTCACTCCACCC +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVSFCLL*QLLTPP
Trigger: GGGTGGAGTGAGGAGCTGGCAGAGGAGACAGAAGGA...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATAGGCGTGAGCCACCGTaGCCGGCCTTAACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYRREPP*PALTSN
Trigger: GTTGCTTGTTAAGGCCGGGCACGGTGGCTCACGCCT...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGTGCTGGGCACTGACCTaGCACACCTCATCACCCATG +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWCWALT*HTSSPM
Trigger: CATGGGTGATGAGGTGTGCCAGGTCAGTGCCCAGCA...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCTGCTGGGCACTGACCTaGCACACCTCATCACCCATG +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSACWALT*HTSSPM
Trigger: CATGGGTGATGAGGTGTGCCAGGTCAGTGCCCAGCA...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGAGCTCTGCCTGGACTaGCTGCTGGGCACTGACCTG +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIELCLD*LLGTDL
Trigger: CAGGTCAGTGCCCAGCAGCCAGTCCAGGCAGAGCTC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATGAGCTCTGCCTGGACTaGCTGCTGGGCACTGACCTG +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNELCLD*LLGTDL
Trigger: CAGGTCAGTGCCCAGCAGCCAGTCCAGGCAGAGCTC...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGGTGGAGCGGGCAATaGCCATCACTGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIGWSGQ*PSLVLP
Trigger: TGGCAGGACCAGTGATGGCCATTGCCCGCTCCACCC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGGTTAGAAAGGGCATGTaGAGGGTGGAGCGGGCAATG +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLVRKGM*RVERAM
Trigger: CATTGCCCGCTCCACCCTCCACATGCCCTTTCTAAC...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGAACCACCCGAGTAGCTaGGAGTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQNHPSS*EYRCAP
Trigger: TGGTGCACACCTGTACTCCCAGCTACTCGGGTGGTT...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGGGCCTCTCACTGCTATaGTCAGGAATCAATGAGCAT +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRGLSLL*SGINEH
Trigger: ATGCTCATTGATTCCTGACCATAGCAGTGAGAGGCC...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGGAGGTGGGTGGCAGGTaGTCTGGAGTAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWEVGGR*SGVGSS
Trigger: AGAGCTCCCTACTCCAGACCACCTGCCACCCACCTC...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCTTGTGTTCTCAACTTaGGAGGTGGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDLVFST*EVGGRW
Trigger: CCACCTGCCACCCACCTCCCAAGTTGAGAACACAAG...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCACTGATGCGGTGGGATaGGAGGACACAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLTDAVG*EDTGVR
Trigger: TCTCACCCCTGTGTCCTCCCATCCCACCGCATCAGT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTGCCGTCCTGCAGCAGTaGGGACCCACGTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIAVLQQ*GPTCGF
Trigger: AAAGCCACACGTGGGTCCCCACTGCTGCAGGACGGC...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTGCAGTGGTGCGATCTTaGCTCACTGCAACGTCCACC +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVAVVRS*LTATST
Trigger: GGTGGACGTTGCAGTGAGCCAAGATCGCACCACTGC...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp CCAGTGACCCTCGGAAGCACCCCTGATAGACAGCTGTaGGGTGTGAAGGATCCATCCATAAGTCGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PVTLGSTPDRQL*GVKDPSISRQN
Trigger: ATTCTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCTTCCGAGGGTCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp TCCACCCAAGCTCTCCCAAGCTGGGCTTCCCAGGGCTaGGTTATGTGCTCTGTACCTTCCTTTCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: STQALPSWASQG*VMCSVPSFLFL
Trigger: GAGAAAGAGAAAGGAAGGTACAGAGCACATAACCAAGCCCTGGGAAGCCCAGCTTGGGAGAGCTTGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp CACATCCCTTTGTTACAGTGGGGGTCTGAAGGAGTGTaGAGGGGTGGGAAAGCCACCTCACTCTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: HIPLLQWGSEGV*RGGKATSLYGK
Trigger: CTTCCCATAGAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAAAGGGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCTTCATTCTCGATTTTaGGCGTGGCAAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDLHSRF*AWQGGT
Trigger: AGTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAG...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGGGAGGCACCCTTCTTaGAGGATAGTTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWGRHPS*RIVLWQ
Trigger: CTGCCAGAGAACTATCCTTCAAGAAGGGTGCCTCCC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTCCTCAGATGCACGGTaGTACAGCAGCAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPSSDAR*YSSREA
Trigger: TGCCTCCCTGCTGCTGTATCACCGTGCATCTGAGGA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGAGGCTCGGAGCTCCTaGGGGCAACGTTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFEARSS*GQRCAK
Trigger: CTTTGCACAACGTTGCCCTCAGGAGCTCCGAGCCTC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATCTGGCTATACTCCAATaGGGTGTGGCATTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDLAILQ*GVAFGF
Trigger: GAACCCGAATGCCACACCTCATTGGAGTATAGCCAG...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGTTTCTAGGCAGTTATTaGATAACGGATCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRFLGSY*ITDLWR
Trigger: CCTCCAAAGATCCGTTATTCAATAACTGCCTAGAAA...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAGGACCGACAGGGAGGTaGGATGGGACATTACTGAGC +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRGPTGR*DGTLLS
Trigger: GCTCAGTAATGTCCCATCTCACCTCCCTGTCGGTCC...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTAAAAGAAACCCAGTaGCCCTCGGAAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWLKETQ*PSEAPL
Trigger: CAGGGGTGCTTCCGAGGGTCACTGGGTTTCTTTTAG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGGAATCCTCACTTATCTaGATGAACCGCATAATCACA +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRESSLI*MNRIIT
Trigger: TGTGATTATGCGGTTCATGCAGATAAGTGAGGATTC...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTCCTGAGCATGAGCTCTaGCTGGACTGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFIPEHEL*LDWLLG
Trigger: GCCCAGCAGCCAGTCCAGGCAGAGCTCATGCTCAGG...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAGTGGCAAGGCGGGACTaGAACTGTTGGTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRVARRD*NCWYLS
Trigger: GCTCAGGTACCAACAGTTGCAGTCCCGCCTTGCCAC...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCCCACCAGTCCTCAGATaGACGGTGATACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAPPVLR*TVIQQQ
Trigger: CTGCTGCTGTATCACCGTGCATCTGAGGACTGGTGG...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGCTGAGGGCAACGTTGTaGAAAGGGCTGAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKLRATL*KGLRDS
Trigger: GGAATCTCTCAGCCCTTTGCACAACGTTGCCCTCAG...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCACTGGAGGAGCTCGTaGTACGTCGAATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWHWRSS*YVESEA
Trigger: AGCCTCAGATTCGACGTAGCACGAGCTCCTCCAGTG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACGCCTGTGTGCTAGGATaGCAGAGAAAGAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDACVLG*QRKRVS
Trigger: GGAGACCCTCTTTCTCTGGCATCCTAGCACACAGGC...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCCCACCTCCCCTGTGTaGTGCCTCTGTGGCTATAAA +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWPTSPV*CLCGYK
Trigger: TTTATAGCCACAGAGGCAGCACACAGGGGAGGTGGG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGTGTTGTACGAAGATGTaGAAAGCTGTTGAATGGTGT +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRCCTKM*KAVEWC
Trigger: ACACCATTCAACAGCTTTGCACATCTTCGTACAACA...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGAGTCCTAACTTCAGCTaGACAGCCAAGCAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRSPNFS*TAKQLK
Trigger: TTTTAGCTGCTTGGCTGTGCAGCTGAAGTTAGGACT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACGGAGGCTTCTATGAGTaGCATGGCAGGGGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDGGFYE*HGRGRD
Trigger: GTCTCTTCCCCTGCCATGGCACTCATAGAAGCCTCC...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGTTCTCTTGGCGATGCTaGGTTTACTCAGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRFSWRC*VYSGRF
Trigger: AAACCTACCTGAGTAAACCCAGCATCGCCAAGAGAA...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGTCTGTACCAGCATCTTaGTCCACTTCCTCCAATGTA +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRSVPAS*STSSNV
Trigger: TACATTGGAGGAAGTGGACCAAGATGCTGGTACAGA...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCTTACTGGAGGGGGTaGCTCTCCTCTTTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDPYWRG*LSSFSL
Trigger: CAACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGG...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGCCTTACTGGAGGGGGTaGCTCTCCTCTTTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQPYWRG*LSSFSL
Trigger: CAACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGG...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGGCCAGGACGCCTTACTaGAGGGGGTGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKARTPY*RGWLSS
Trigger: AGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGC...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGGGGTGGAGCGGGCAATaGCCATCACTGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKGWSGQ*PSLVLP
Trigger: TGGCAGGACCAGTGATGGCCATTGCCCGCTCCACCC...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTTGGTCAGGCTGCCATaGCCAGGCCTGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSLVRLP*PGLRLR
Trigger: GCGGAGGCGCAGGCCTGGCCATGGCAGCCTGACCAA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCTGAGCAATTGTCTCTaGGTCCAGTGGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDLSNCL*VQWLVV
Trigger: GACCACAAGCCACTGGACCCAGAGACAATTGCTCAG...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGGAGATTCCGTGGAAGTaGCAGGGGTGGGAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQEIPWK*QGWESF
Trigger: AAAACTCTCCCACCCCTGCCACTTCCACGGAATCTC...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCGCCACAGACCAACACTaGCTATACTCCAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLATDQH*LYSNEV
Trigger: CACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGC...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGGTGGCAGGTGGTCTaGAGTAGGGAGCTCTATTTA +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGWQVV*SRELYL
Trigger: TAAATAGAGCTCCCTACTCCAGACCACCTGCCACCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCGAGGTGGGTGGCAGGTaGTCTGGAGTAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGEVGGR*SGVGSS
Trigger: AGAGCTCCCTACTCCAGACCACCTGCCACCCACCTC...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTCTCAACTTGGGAGGTaGGTGGCAGGTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPSQLGR*VAGGLE
Trigger: CTCCAGACCACCTGCCACCCACCTCCCAAGTTGAGA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGACTGATGCGGTGGGATaGGAGGACACAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWTDAVG*EDTGVR
Trigger: TCTCACCCCTGTGTCCTCCCATCCCACCGCATCAGT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGAACAGGAGATGGTCGTaGCAGGCTGAGGAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWNRRWS*QAEELK
Trigger: CTTAAGCTCCTCAGCCTGCCACGACCATCTCCTGTT...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACGCAACCTCCGTCTCATaGGTTCAAGCAATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDATSVS*VQAIPL
Trigger: CAGGGGAATTGCTTGAACCCATGAGACGGAGGTTGC...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGAATCAAAGTGTAAGATaGGCTGAAATGGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRNQSVR*AEMVFS
Trigger: ACTGAAGACCATTTCAGCCCATCTTACACTTTGATT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCATCTCTTTGTCCTTCTTaGATCGGCTCGGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSSLCPS*IGSGWT
Trigger: TGTCCACCCCGAGCCGATTCAAGAAGGACAAAGAGA...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTACAGAGCTTCGCCGTTaGTGTCTCTCCTCTAGTCGA +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVTELRR*CLSSSR
Trigger: TCGACTAGAGGAGAGACATCAACGGCGAAGCTCTGT...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGATAGTACTTGAAAACTaGGGCATTGGTGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRIVLEN*GIGGFK
Trigger: CTTGAAGCCACCAATGCCTCAGTTTTCAAGTACTAT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGCAGGGTACATCTCCATaGATCTCTGCTTATCGCTCC +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWQGTSP*ISAYRS
Trigger: GGAGCGATAAGCAGAGATTCATGGAGATGTACCCTG...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATGACAGTGGACTTCACTaGTTCTGTGGAACGACTGTG +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDDSGLH*FCGTTV
Trigger: CACAGTCGTTCCACAGAATCAGTGAAGTCCACTGTC...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTTCCTCAGATGCACGGTaGTACAGCAGCAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSISSDAR*YSSREA
Trigger: TGCCTCCCTGCTGCTGTATCACCGTGCATCTGAGGA...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACCACTATATACTGGTaGGGCACCAGCCCGTCAATC +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSATTIYW*GTSPSI
Trigger: GATTGACGGGCTGGTGCCTCACCAGTATATAGTGGT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATGTTCATGTCCTTGGATaGGGACTTGTCTTCCGTGAC +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDVHVLG*GLVFRD
Trigger: GTCACGGAAGACAAGTCCTCATCCAAGGACATGAAC...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGGTGCTACGTCGAATCTaGGGCTCGGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGVLRRI*GSELLR
Trigger: CCTCAGGAGCTCCGAGCCTCAGATTCGACGTAGCAC...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGAGCCGCTGGGGAGGATaGCCAGATAGAAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWSRWGG*PDRRLN
Trigger: ATTCAGCCTTCTATCTGGTCATCCTCCCCAGCGGCT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACAAGACAGCAAAGTCCTaGTGGGGAGCACAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDKTAKS*WGAQKG
Trigger: GCCTTTCTGTGCTCCCCATCAGGACTTTGCTGTCTT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCTCCCCAAATTGCACATaGAGCCTGATAAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLSPNCT*SLISSL
Trigger: CAAGGAGCTTATCAGGCTTCATGTGCAATTTGGGGA...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGAGATGGGACATTACTaGGCACCGAGGCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYEMGHY*APRHRK
Trigger: CTTCCTGTGCCTCGGTGCTCAGTAATGTCCCATCTC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATTTTAGGTCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDFRSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTAAA...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGCACAAGCACATGTGTTaGTATCCAGCCCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQHKHMC*YPAQSH
Trigger: ATGGGACTGGGCTGGATATCAACACATGTGCTTGTG...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGTGTTCTTTCGCCATTaGCCCCTGGCAGTTGGTAAC +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAVFFRH*PLAVGN
Trigger: GTTACCAACTGCCAGGGGTCAATGGCGAAAGAACAC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGTTACAGTGGGGGTCTaGAGGAGTGTTGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFVTVGV*RSVEGW
Trigger: CCACCCCTCAACACTCCTTCAGACCCCCACTGTAAC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGTCTGGGCTTCCTTGTaGAGACAAAGGGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWVWASL*RQRGKE
Trigger: TTCCTTACCCCTTTGTCTTCACAAGGAAGCCCAGAC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGAGGTTGCATGGTCTTTaGTTTCTCTCCTTACTTGGT +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRRLHGL*FLSLLG
Trigger: ACCAAGTAAGGAGAGAAAGCAAAGACCATGCAACCT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCCCAGATCTCCCAATTTaGTTTTCCTCTTGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGPDLPI*FSSCFS
Trigger: CGAAAAACAAGAGGAAAAGCAAATTGGGAGATCTGG...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTGTGGCAAGGCGGGACTaGAACTGTTGGTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIVARRD*NCWYLS
Trigger: GCTCAGGTACCAACAGTTGCAGTCCCGCCTTGCCAC...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGCTCTTCTCTTGGCGATaGTGGGTTTACTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWLFSWR*WVYSGR
Trigger: CCTACCTGAGTAAACCCAGCATCGCCAAGAGAAGAG...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTCTCCCAGGGTCCTCTaGAGCAAGTCATGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLSPRVL*SKSCLA
Trigger: AGCCAAACATGACTTGCTGCAGAGGACCCTGGGAGA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTGCCATGGCCAGGCCTaGGCCTCCGCTCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSCHGQA*ASAQDC
Trigger: ACAGTCCTGAGCGGAGGCGCAGGCCTGGCCATGGCA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTTGAGGGAGTCGTaGCGGCTGATGTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPFLRES*RLMLVR
Trigger: CCTGACCAACATCAGCCGGCACGACTCCCTCAAGAA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGGGCATGCTTTGCTGTaGTCTGTCTCTCCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSGHALL*SVSPVL
Trigger: GAGAACTGGAGAGACAGAGCACAGCAAAGCATGCCC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGAGAGTTTTTCACTTaGTCCAGGGTATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGEFFT*SRVSST
Trigger: GGTGCTGGATACCCTGGAGCAAGTGAAAAACTCTCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACGGAGAGTTTTTCACTTaGTCCAGGGTATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDGEFFT*SRVSST
Trigger: GGTGCTGGATACCCTGGAGCAAGTGAAAAACTCTCC...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCCTGAGGGCAACGTTGTaGAAAGGGCTGAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSALRATL*KGLRDS
Trigger: GGAATCTCTCAGCCCTTTGCACAACGTTGCCCTCAG...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACCACGCCCATTCTGGGTaGCACCATAGGCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDHAHSG*HHRLES
Trigger: ACTTTCAAGCCTATGGTGGCACCCAGAATGGGCGTG...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCCACCTCCCCTGTGTaGTGCCTCTGTGGCTATAAA +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRPTSPV*CLCGYK
Trigger: TTTATAGCCACAGAGGCAGCACACAGGGGAGGTGGG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTCAGAGCACGGGCGAATaGGATGCTGTCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIQSTGE*DAVSST
Trigger: TGTGCTGCTGACAGCATCGCATTCGCCCGTGCTCTG...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGGCCTGTAATGGTACATaGCAAAAATGTACAGTACTA +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRACNGT*QKCTVL
Trigger: TAGTACTGTACATTTTTGGCATGTACCATTACAGGC...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCCAAGTGTTTAACTCCTaGGGCTTAATTTTCTTACGG +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGQVFNS*GLIFLR
Trigger: CCGTAAGAAAATTAAGCCGCAGGAGTTAAACACTTG...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAGCAATCTTGGCTCACTaGAACCTCCGCTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRAILAH*NLRFLG
Trigger: ACCCAGGAAGCGGAGGTTGCAGTGAGCCAAGATTGC...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATTTGCCCAGGCTGGAGTaGAGTGGCGCAATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNLPRLE*SGAISV
Trigger: AACCGAGATTGCGCCACTGCACTCCAGCCTGGGCAA...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGTCGAATATGGAAGACTaGATCACCAGATCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRSNMED*ITRSPN
Trigger: ATTGGGAGATCTGGTGATCCAGTCTTCCATATTCGA...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGCAATGGCCATCACTaGTCCTGCCAGGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIGNGHH*SCQDAL
Trigger: TAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACCTGAGCAATTGTCTCTaGGTCCAGTGGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDLSNCL*VQWLVV
Trigger: GACCACAAGCCACTGGACCCAGAGACAATTGCTCAG...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGAGATTCCGTGGAAGTaGCAGGGGTGGGAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAEIPWK*QGWESF
Trigger: AAAACTCTCCCACCCCTGCCACTTCCACGGAATCTC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGTACTCCAATGAGGTGTaGCATTCGGGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWYSNEV*HSGSSA
Trigger: GGCAGAAGAACCCGAATGCCACACCTCATTGGAGTA...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCCGATGCATTCACCAATaGGCTGATGAAGTAAAATCT +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGRCIHQ*ADEVKS
Trigger: AGATTTTACTTCATCAGCCCATTGGTGAATGCATCG...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGTTCAAAGCTCAGTCTTaGCTGGATCTCCACGGTGTC +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKFKAQS*LDLHGV
Trigger: GACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAA...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATCTTGTGTTCTCAACTTaGGAGGTGGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYLVFST*EVGGRW
Trigger: CCACCTGCCACCCACCTCCCAAGTTGAGAACACAAG...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCATTCGAAACACTCGAGTaGGCAGCAGGAATTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSFETLE*AAGIGR
Trigger: CCTCCCAATTCCTGCTGCCCACTCGAGTGTTTCGAA...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCCACTGCACTACAGCCTaGGTGACACAGAGAGATTCG +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLHCTTA*VTQRDS
Trigger: CGAATCTCTCTGTGTCACCCAGGCTGTAGTGCAGTG...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAGGGTAGCAGGATGGTaGAGTCTTTCCTGGAACAAC +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLRVAGW*SLSWNN
Trigger: GTTGTTCCAGGAAAGACTCCACCATCCTGCTACCCT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGATTATTATTTCTGTTTaGGAAATGGAGGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRIIISV*EMEAWV
Trigger: AACCCATGCCTCCATTTCCCAAACAGAAATAATAAT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACCTACGGCAATCGTTGTaGCAAGGGGAATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDLRQSL*QGEWCT
Trigger: TGTGCACCATTCCCCTTGCCACAACGATTGCCGTAG...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACAGGCTGTAGTGCAGTaGCACAATCTCGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRQAVVQ*HNLGSL
Trigger: CAGTGACCCGAGATTGTGCCACTGCACTACAGCCTG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGATTACATGCTCCTCCTaGTTTTCCTCCTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWITCSS*FSSSAL
Trigger: CAGGGCGGAGGAGGAAAACCAGGAGGAGCATGTAAT...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCCTGGCTGCTGGGCACTaGCCTGGCACACCTCATCAC +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSLAAGH*PGTPHH
Trigger: GTGATGAGGTGTGCCAGGTCAGTGCCCAGCAGCCAG...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCTTCATTCTCGATTTTaGGCGTGGCAAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYLHSRF*AWQGGT
Trigger: AGTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGCCTGGCAAGACACTTaGTCCTGTATTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAAWQDT*SCISGT
Trigger: TGTCCCAGAAATACAGGATCAAGTGTCTTGCCAGGC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGGGAGGCACCCTTCTTaGAGGATAGTTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFGRHPS*RIVLWQ
Trigger: CTGCCAGAGAACTATCCTTCAAGAAGGGTGCCTCCC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTACCACTATATACTGGTaGGGCACCAGCCCGTCAATC +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPTTIYW*GTSPSI
Trigger: GATTGACGGGCTGGTGCCTCACCAGTATATAGTGGT...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGTGGCTTGTGGTCATTaGAGCCCGTGTATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFVACGH*SPCIAL
Trigger: CAGGGCAATACACGGGCTTCAATGACCACAAGCCAC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACTGGCTATACTCCAATaGGGTGTGGCATTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRLAILQ*GVAFGF
Trigger: GAACCCGAATGCCACACCTCATTGGAGTATAGCCAG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACAAAGAGAACACTGCATaGACCAAGGCCTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDKENTA*TKASGA
Trigger: AGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTAAGGCCATGTTCTGCTaGTGGCCCTGCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIKAMFC*WPCMAL
Trigger: AAGAGCCATGCAGGGCCATCAGCAGAACATGGCCTT...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCTTCCTAAGGAATTTGTaGGGATTGTTTAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGFLRNL*GLFKRA
Trigger: AGCCCTTTTAAACAATCCTCACAAATTCCTTAGGAA...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTAGCCGCTGGGGAGGATaGCCAGATAGAAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSISRWGG*PDRRLN
Trigger: ATTCAGCCTTCTATCTGGTCATCCTCCCCAGCGGCT...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGTCCCCAAATTGCACATaGAGCCTGATAAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWSPNCT*SLISSL
Trigger: CAAGGAGCTTATCAGGCTTCATGTGCAATTTGGGGA...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGAATCGAAAACAAGACTaGGTCCTAAGCACATTTCCT +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRNRKQD*VLSTFP
Trigger: AGGAAATGTGCTTAGGACTCAGTCTTGTTTTCGATT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTTACCGGTACCGCAATTaGTCAAACCGACAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVYRYRN*SNRQER
Trigger: CCTTTCCTGTCGGTTTGATCAATTGCGGTACCGGTA...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGCACTACAGCCTGGGTaGCACAGAGAGATTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIALQPG*HREIRL
Trigger: GAGACGAATCTCTCTGTGTCACCCAGGCTGTAGTGC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGCTGAAATGGCAGGCTaGGGTCAAAGCGGCAGACAT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIAEMAG*GQSGRH
Trigger: ATGTCTGCCGCTTTGACCTCAGCCTGCCATTTCAGC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATAGGAAGTACACTCCATaGGACCAGGAGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNRKYTP*DQEPCV
Trigger: CACACAGGGCTCCTGGTCTCATGGAGTGTACTTCCT...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGACAACTTATCCATACTaGAACAGGTCAAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRTTYPY*NRSNAS
Trigger: AGAGGCATTTGACCTGTTTCAGTATGGATAAGTTGT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACGGGAATAACCTGTCCTaGGTCCTGATGTCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDGNNLS*VLMSCV
Trigger: CACACAAGACATCAGGACTCAGGACAGGTTATTCCC...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCCAGCTGTTCCGGGTTTaGTTTCAATGGGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLQLFRV*FQWASF
Trigger: AAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTG...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCGCATCTCCGTTTGCTaGTCCAGGCATTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDRISVC*SRHFCC
Trigger: ACAACAAAAATGCCTGGAGCAGCAAACGGAGATGCG...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGATCTCCATGAATCTCTaGTTATCGCTCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQISMNL*LSLLGS
Trigger: AGAGCCCAGGAGCGATAAGCAGAGATTCATGGAGAT...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACTCTTCTCTTGGCGATaGTGGGTTTACTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSLFSWR*WVYSGR
Trigger: CCTACCTGAGTAAACCCAGCATCGCCAAGAGAAGAG...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATTCTCCCAGGGTCCTCTaGAGCAAGTCATGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYSPRVL*SKSCLA
Trigger: AGCCAAACATGACTTGCTGCAGAGGACCCTGGGAGA...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATAAGTCAGGAGGAGTTTaGGGATGTGAAGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYKSGGV*GCEAPS
Trigger: AGAGGGCGCTTCACATCCGCAAACTCCTCCTGACTT...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATCCACCAGTCCTCAGATaGACGGTGATACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNPPVLR*TVIQQQ
Trigger: CTGCTGCTGTATCACCGTGCATCTGAGGACTGGTGG...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTTTCTTGAGGGAGTCGTaGCGGCTGATGTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIFLRES*RLMLVR
Trigger: CCTGACCAACATCAGCCGGCACGACTCCCTCAAGAA...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCACATCAGGGGCATaGTTTGCTGTGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYTTSGA*FAVLCL
Trigger: GAGACAGAGCACAGCAAAGCATGCCCCTGATGTGGT...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTGCCTCAGGTGCTTCTTaGTGCCTTCATTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVASGAS*CLHFHR
Trigger: TCTGTGGAAATGAAGGCAGCAAGAAGCACCTGAGGC...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACAGGTGTGCACCACCATaGCTGGGCTTTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYRCAPP*LGFVAC
Trigger: ACATGCTACAAAGCCCAGGCATGGTGGTGCACACCT...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGGCCAGCAAACACCCTTaGTCTGCCTTTCTAAGATTC +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKASKHP*SAFLRF
Trigger: GAATCTTAGAAAGGCAGAGCAAGGGTGTTTGCTGGC...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATATGTTGTTTCAGCACTaGGGGAGGAGCAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDMLFQH*GRSNLS
Trigger: AGAGAGATTGCTCCTCCCGCAGTGCTGAAACAACAT...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATTCAAGCAATTCTCCTaGCTCAGCCTCCCGAACAGC +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRFKQFS*LSLPNS
Trigger: GCTGTTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTAGGCGTGAGCCACTGTaGCCGGCCCTGGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HILAFIFISRASCLWWYSRREPL*PALGSF
Trigger: AAAAGAACCCAGGGCCGGGCACAGTGGCTCACGCCT...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGCAGGCAGTGTTTAATTaGTCTGGGCTCAAGCAATCC +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWQAVFN*SGLKQS
Trigger: GGATTGCTTGAGCCCAGAGCAATTAAACACTGCCTG...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTGGCAGGGGAAGAGACTaGTTGGAAAGCTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVGRGRD*LESLNP
Trigger: AGGATTCAAGCTTTCCAAGCAGTCTCTTCCCCTGCC...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACGGGACTGCAACTGTTaGTACCTGAGCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRRDCNC*YLSMSS
Trigger: AGAGCTCATGCTCAGGTACCAACAGTTGCAGTCCCG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGGTTGGCTCTTCTCTTaGCGATGCTGGGTTTACTCA +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSGWLFS*RCWVYS
Trigger: TGAGTAAACCCAGCATCGCCAAGAGAAGAGCCAACC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGACTTCCTGTGTTTCTaGGGCTTAGGGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWDFLCF*GLGGTF
Trigger: AAATGTTCCCCCTAAGCCCCAGAAACACAGGAAGTC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGTTGGGCCAAAGCAAATaGCCAGGTTATAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLLGQSK*PGYKGP
Trigger: TGGACCCTTATAACCTGGCCATTTGCTTTGGCCCAA...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTGACAGGCATCAATGTTaGGCCAAAGCAAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVDRHQC*AKANGQ
Trigger: CTGGCCATTTGCTTTGGCCCAACATTGATGCCTGTC...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACACCGTGCTCACTGTATaGGCTGTCGCAATAGTCATC +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDTVLTV*AVAIVI
Trigger: GATGACTATTGCGACAGCCCATACAGTGAGCACGGT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGGGCAATGGCCATCACTaGTCCTGCCAGGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKGNGHH*SCQDAL
Trigger: TAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCC...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATTGTCTCTGGGTCCAGTaGCTTGTGGTCATTGAAGCC +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYCLWVQ*LVVIEA
Trigger: GGCTTCAATGACCACAAGCCACTGGACCCAGAGACA...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTGTCTCTGGGTCCAGTaGCTTGTGGTCATTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPCLWVQ*LVVIEA
Trigger: GGCTTCAATGACCACAAGCCACTGGACCCAGAGACA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACTGGAAGTGGCAGGGGTaGGAGAGTTTTTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDWKWQG*ESFSLA
Trigger: AGCAAGTGAAAAACTCTCCCACCCCTGCCACTTCCA...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAAAGAACAGCAGGTTTTaGCCTAAGGGCTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSKNSRF*PKGWRL
Trigger: AAGCCTCCAGCCCTTAGGCCAAAACCTGCTGTTCTT...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGAGTCACCTCCCTTTATaGCCTTGCTTGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKSHLPL*PCLAGF
Trigger: AAAACCAGCCAAGCAAGGCCATAAAGGGAGGTGACT...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGAAAGCTCAGGAGAAATaGGGAGGGGCTAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWKAQEK*GGARQG
Trigger: ACCTTGTCTAGCCCCTCCCCATTTCTCCTGAGCTTT...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACATTTTAAAGAAGTGGTaGAATGGCCGGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDILKKW*NGRAWW
Trigger: CCACCATGCCCGGCCATTCCACCACTTCTTTAAAAT...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGACTGTTATGCATTACTaGCAGGGATGTAAATTTGTA +
Preference number: 4 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRTVMHY*QGCKFV
Trigger: TACAAATTTACATCCCTGCCAGTAATGCATAACAGT...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTCAAGGAGGAGACAGTaGGCACAGCCACACCACCGT +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGSRRRQ*AQPHHR
Trigger: ACGGTGGTGTGGCTGTGCCCACTGTCTCCTCCTTGA...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGACAATTAATGCCAGCTaGGAGGTTTGGGGAACCCTT +
Preference number: 4 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQTINAS*EVWGTL
Trigger: AAGGGTTCCCCAAACCTCCCAGCTGGCATTAATTGT...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCCTACCACATCCAAGGTaGCATTCAAGCTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLLPHPR*HSSCPI
Trigger: GATGGGACAGCTTGAATGCCACCTTGGATGTGGTAG...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTTCCTCTCCTTCTACCTaGCTATCTAGTCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVSSPST*LSSPSH
Trigger: GTGGCTTGGACTAGATAGCCAGGTAGAAGGAGAGGA...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGCAAGCTCTCCCAAGCTaGGCTTCCCAGGGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGQALPS*ASQGLV
Trigger: AACCAAGCCCTGGGAAGCCCAGCTTGGGAGAGCTTG...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp GCTAAACCCCGCTCCACATGGAACCGAAGGTGCTCATaGTCAGCTACCACGCAATGCCATTATCACCTTTCA +
Preference number: 4 (lower is better)
Translates to: AKPRSTWNRRCS*SATTQCHYHLS
Trigger: TGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCATGTGGAGCGGGGTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR CAA 72 bp CACTGGGATCGTCCCATGGAGACAATTGCAAGTCTTTaGCATGAGCTAAACCCCGCTCCACATGGAACCGAA +
Preference number: 4 (lower is better)
Translates to: HWDRPMETIASL*HELNPAPHGTE
Trigger: TTCGGTTCCATGTGGAGCGGGGTTTAGCTCATGCAAAAGACTTGCAATTGTCTCCATGGGACGATCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR CAA 72 bp GTCCCAACTACTCAAGGCAGAAGCCAGCAAACACCCTaGCTCTGCCTTTCTAAGATTCTTACAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VPTTQGRSQQTP*LCLSKILTGCR
Trigger: CCTGCACCCTGTAAGAATCTTAGAAAGGCAGAGCAAGGGTGTTTGCTGGCTTCTGCCTTGAGTAGTTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCTCTCTTTGTCCTTCTTaGATCGGCTCGGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFSLCPS*IGSGWT
Trigger: TGTCCACCCCGAGCCGATTCAAGAAGGACAAAGAGA...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTAGATCCTGGAGAAGCTaGACTCGCATCTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIRSWRS*TRISVC
Trigger: GCAAACGGAGATGCGAGTTCAGCTTCTCCAGGATCT...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCACAGAGCTTCGCCGTTaGTGTCTCTCCTCTAGTCGA +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFTELRR*CLSSSR
Trigger: TCGACTAGAGGAGAGACATCAACGGCGAAGCTCTGT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCAGGGTACATCTCCATaGATCTCTGCTTATCGCTCC +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYQGTSP*ISAYRS
Trigger: GGAGCGATAAGCAGAGATTCATGGAGATGTACCCTG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGGGAACCAGACACTCTaGAAATCCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYGNQTL*KSPDAE
Trigger: TTCAGCATCAGGGGATTTTCAGAGTGTCTGGTTCCC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCACCACTATATACTGGTaGGGCACCAGCCCGTCAATC +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGTTIYW*GTSPSI
Trigger: GATTGACGGGCTGGTGCCTCACCAGTATATAGTGGT...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGCAGGACTGTCATTGTTaGGGCCACGGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRQDCHC*GHGSAA
Trigger: TGCTGCAGAACCGTGGCCTCAACAATGACAGTCCTG...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACAGGTCACAACCTTTCTaGCTCAGCTGGGCTACATTA +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDRSQPF*LSWATL
Trigger: TAATGTAGCCCAGCTGAGTCAGAAAGGTTGTGACCT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCATGAACTGTGGGAACTaGCGACCAGTTACACCCCGT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFMNCGN*RPVTPR
Trigger: ACGGGGTGTAACTGGTCGTCAGTTCCCACAGTTCAT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCCAAAGCGGCAGACATTaGATTCATTTCAGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAQSGRH*IHFSSA
Trigger: GGCGGAACTGAAATGAATTCAATGTCTGCCGCTTTG...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGCCTCTGATTACTGTTTaGCATGTTCCAAATGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWPLITV*HVPNAP
Trigger: CGGAGCATTTGGAACATGTCAAACAGTAATCAGAGG...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGGCTCTGTTCAGACTTaGATGGTAGCCAAGATCACA +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWGSVQT*MVAKIT
Trigger: TGTGATCTTGGCTACCATGCAAGTCTGAACAGAGCC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTATCTCCATGAATCTCTaGTTATCGCTCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVISMNL*LSLLGS
Trigger: AGAGCCCAGGAGCGATAAGCAGAGATTCATGGAGAT...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGGCCATCACTGGTCCTaGCAGGACGCCTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSGHHWS*QDALLE
Trigger: CTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCGGGCATGCTTTGCTGTaGTCTGTCTCTCCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGGHALL*SVSPVL
Trigger: GAGAACTGGAGAGACAGAGCACAGCAAAGCATGCCC...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATGGGCATGCTTTGCTGTaGTCTGTCTCTCCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNGHALL*SVSPVL
Trigger: GAGAACTGGAGAGACAGAGCACAGCAAAGCATGCCC...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCCTGAGGGCAACGTTGTaGAAAGGGCTGAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGLRATL*KGLRDS
Trigger: GGAATCTCTCAGCCCTTTGCACAACGTTGCCCTCAG...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGCATTCGGGTTCTTCTaGCTTCAGGTCACAACCTTT +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSAFGFF*LQVTTF
Trigger: AAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACTCAGCTACCACGCAATaGCATTATCACCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDSATTQ*HYHLSA
Trigger: GGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGA...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATGCCTCAGGTGCTTCTTaGTGCCTTCATTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYASGAS*CLHFHR
Trigger: TCTGTGGAAATGAAGGCAGCAAGAAGCACCTGAGGC...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGTCAAAAGAGAACACTaGATGAACCAAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSVKREH*MNQGLR
Trigger: CCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTGAC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGTTGGAGTGCAGTGGTaGAATCATAGCTTATTGCAG +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWVGVQW*NHSLLQ
Trigger: CTGCAATAAGCTATGATTGCACCACTGCACTCCAAC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCTCCTCCTATTAAACTaGAGTGATGCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYLLLLN*SDAAAA
Trigger: GGCTGCTGCTGCATCACTGCAGTTTAATAGGAGGAG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTATGATCTCAGCTCACTaGAGCGTCTACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGMISAH*SVYLPG
Trigger: GCCTGGGAGGTAGACGCTGCAGTGAGCTGAGATCAT...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATCACCCAGGCTGAAGTaGAGAGGTATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRSPRLK*RGMISA
Trigger: AGCTGAGATCATACCTCTGCACTTCAGCCTGGGTGA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAGTTCACTGTAACCTCTaGGTCCCGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRVHCNL*VPGSSD
Trigger: ATCACTTGAACCCGGGACGCAGAGGTTACAGTGAAC...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTCTCAAACTTCATTGGTaGACAGAACGCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVLKLHW*TERSRV
Trigger: TACCCTGCTGCGTTCTGTCCACCAATGAAGTTTGAG...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGAAACTCAAACTTCATTaGTGGACAGAACGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWKLKLH*WTERSR
Trigger: CCTGCTGCGTTCTGTCCACCAATGAAGTTTGAGTTT...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGAGCTCTGCCTGGACTaGCTGCTGGGCACTGACCTG +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRELCLD*LLGTDL
Trigger: CAGGTCAGTGCCCAGCAGCCAGTCCAGGCAGAGCTC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTCGGGACTGCAACTGTTaGTACCTGAGCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIRDCNC*YLSMSS
Trigger: AGAGCTCATGCTCAGGTACCAACAGTTGCAGTCCCG...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATGTGGAACGACTGTGCTaGAAGCATTCAGAAACATCA +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDVERLC*KHSETS
Trigger: TGATGTTTCTGAATGCTTCCAGCACAGTCGTTCCAC...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACACTTCACTGATTCTGTaGAACGACTGTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDTSLIL*NDCAGS
Trigger: GCTTCCAGCACAGTCGTTCCACAGAATCAGTGAAGT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAGGTTTCAGAGACAGTaGACTTCACTGATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLRFQRQ*TSLILW
Trigger: CCACAGAATCAGTGAAGTCCACTGTCTCTGAAACCT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTTGGGCCAAAGCAAATaGCCAGGTTATAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLLGQSK*PGYKGP
Trigger: TGGACCCTTATAACCTGGCCATTTGCTTTGGCCCAA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGGTCCAGTGGCTTGTaGTCATTGAAGCCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIGSSGL*SLKPVY
Trigger: ATACACGGGCTTCAATGACCACAAGCCACTGGACCC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCAGTCACCTCCCTTTATaGCCTTGCTTGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLSHLPL*PCLAGF
Trigger: AAAACCAGCCAAGCAAGGCCATAAAGGGAGGTGACT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACAAGCTCTGTACAATGTaGAGAGCGGTGTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDKLCTM*RAVLPS
Trigger: TGAAGGCAACACCGCTCTCCACATTGTACAGAGCTT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATACTCCAATGAGGTGTaGCATTCGGGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRYSNEV*HSGSSA
Trigger: GGCAGAAGAACCCGAATGCCACACCTCATTGGAGTA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGTTTGTAAGTGTAGATaGGGGGACTTGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQVCKCR*GDLEIS
Trigger: GGAGATTTCCAAGTCCCCCCATCTACACTTACAAAC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGGTTTGTAAGTGTAGATaGGGGGACTTGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLVCKCR*GDLEIS
Trigger: GGAGATTTCCAAGTCCCCCCATCTACACTTACAAAC...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGAACCACCCGAGTAGCTaGGAGTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRNHPSS*EYRCAP
Trigger: TGGTGCACACCTGTACTCCCAGCTACTCGGGTGGTT...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGTTCAAAGCTCAGTCTTaGCTGGATCTCCACGGTGTC +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWFKAQS*LDLHGV
Trigger: GACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAA...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATACTATTTTAAAGAAGTaGTGGAATGGCCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDTILKK*WNGRAW
Trigger: CCATGCCCGGCCATTCCACCACTTCTTTAAAATAGT...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGACTATTTTAAAGAAGTaGTGGAATGGCCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLTILKK*WNGRAW
Trigger: CCATGCCCGGCCATTCCACCACTTCTTTAAAATAGT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACATTCAAAGACACCTCTaGCCCTTTGATGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDIQRHL*PFDALC
Trigger: ACAGAGGGCATCAAAGGGCCAGAGGTGTCTTTGAAT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATTTGAGGGTAGCAGGATaGTGGAGTCTTTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYLRVAG*WSLSWN
Trigger: GTTCCAGGAAAGACTCCACCATCCTGCTACCCTCAA...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTTTCTCTTCCTCTTCATaGTGGCCACGTACTAAGGTG +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVFSSSS*WPRTKV
Trigger: CACCTTAGTACGTGGCCACCATGAAGAGGAAGAGAA...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGCAACCTCCGCTTCCTaGGTTAAAGCAAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIATSAS*VKASLL
Trigger: CAGGAGACTTGCTTTAACCCAGGAAGCGGAGGTTGC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAACTCAAGAGAAAAGTaGAGTGAGTCCCCAGAGATC +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLNSREK*SESPEI
Trigger: GATCTCTGGGGACTCACTCCACTTTTCTCTTGAGTT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACGAGCTCGAATTTCTTTaGCTTGACTTTCATACTCGG +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDELEFL*LDFHTR
Trigger: CCGAGTATGAAAGTCAAGTCAAAGAAATTCGAGCTC...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTAGATCCTGGAGAAGCTaGACTCGCATCTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGRSWRS*TRISVC
Trigger: GCAAACGGAGATGCGAGTTCAGCTTCTCCAGGATCT...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCATAGTCCTCGATGGTaGCCATATCTTGTATCGTCT +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWHSPRW*PYLVSS
Trigger: AGACGATACAAGATATGGTCACCATCGAGGACTATG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCCATAGTCCTCGATGGTaGCCATATCTTGTATCGTCT +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLHSPRW*PYLVSS
Trigger: AGACGATACAAGATATGGTCACCATCGAGGACTATG...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATGACAGTGGACTTCACTaGTTCTGTGGAACGACTGTG +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNDSGLH*FCGTTV
Trigger: CACAGTCGTTCCACAGAATCAGTGAAGTCCACTGTC...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGCAGAACGCCAGCAACTaGGTTAATATCATGGTTACT +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLQNASN*VNIMVT
Trigger: AGTAACCATGATATTAACTCAGTTGCTGGCGTTCTG...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGCTGGCTATACTCCAATaGGGTGTGGCATTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKLAILQ*GVAFGF
Trigger: GAACCCGAATGCCACACCTCATTGGAGTATAGCCAG...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAAAGAGAACACTGCATaGACCAAGGCCTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFKENTA*TKASGA
Trigger: AGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGAAGACAGCAAAGTCCTaGTGGGGAGCACAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKKTAKS*WGAQKG
Trigger: GCCTTTCTGTGCTCCCCATCAGGACTTTGCTGTCTT...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTCCAAGTAAGGAGAGGTaGGTCTTTACTGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPPSKER*VFTESS
Trigger: TGAGGACTCAGTAAAGACTCACCTCTCCTTACTTGG...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTTACCGGTACCGCAATTaGTCAAACCGACAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIYRYRN*SNRQER
Trigger: CCTTTCCTGTCGGTTTGATCAATTGCGGTACCGGTA...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATAGCAGGGTAATGACATaGGCATGTTACAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYSRVMT*ACYRGQ
Trigger: CTGACCTCTGTAACATGCTCATGTCATTACCCTGCT...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATTTCTTCCCTGGGTACTaGTCACATTACATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYFFPGY*SHYMLL
Trigger: GAGGAGCATGTAATGTGATCAGTACCCAGGGAAGAA...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTCCTATTAAACTGCAGTaGTGCAGCAGCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIPIKLQ*CSSSPK
Trigger: CTTTGGGCTGCTGCTGCATCACTGCAGTTTAATAGG...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCCGATGTGTTGGGTTTaGATCCCTGGTTTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWPMCWV*IPGFSR
Trigger: TCTAGAAAAACCAGGGATTCAAACCCAACACATCGG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATGGCTCTGTTCAGACTTaGATGGTAGCCAAGATCACA +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYGSVQT*MVAKIT
Trigger: TGTGATCTTGGCTACCATGCAAGTCTGAACAGAGCC...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATATCTCCATGAATCTCTaGTTATCGCTCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYISMNL*LSLLGS
Trigger: AGAGCCCAGGAGCGATAAGCAGAGATTCATGGAGAT...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTCTGTGGAACGACTGTaGTGGAAGCATTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLSVERL*WKHSET
Trigger: TGTTTCTGAATGCTTCCAGCACAGTCGTTCCACAGA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACTCTGTGGAACGACTGTaGTGGAAGCATTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDSVERL*WKHSET
Trigger: TGTTTCTGAATGCTTCCAGCACAGTCGTTCCACAGA...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTCTCCCAGGGTCCTCTaGAGCAAGTCATGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKSPRVL*SKSCLA
Trigger: AGCCAAACATGACTTGCTGCAGAGGACCCTGGGAGA...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCTTGAAGCCCGTGTATTaGCCTGATGACGTGGACCTT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFLKPVY*PDDVDL
Trigger: AAGGTCCACGTCATCAGGGCAATACACGGGCTTCAA...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGATCAGGGGCATGCTTTaGTGTGCTCTGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKIRGML*CALSLQ
Trigger: CTGGAGAGACAGAGCACAGCAAAGCATGCCCCTGAT...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATGCATTCGGGTTCTTCTaGCTTCAGGTCACAACCTTT +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYAFGFF*LQVTTF
Trigger: AAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGC...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATCAGCTACCACGCAATaGCATTATCACCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRSATTQ*HYHLSA
Trigger: GGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGAGGTGTGCACCACCATaGCTGGGCTTTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKRCAPP*LGFVAC
Trigger: ACATGCTACAAAGCCCAGGCATGGTGGTGCACACCT...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTTCAAGCAATTCCCCTaGTTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKFKQFP*FSLPSR
Trigger: CCTACTCGGGAGGCTGAAGCAGGGGAATTGCTTGAA...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTCAGGGCTTGGTTATGTaGTCTGTACCTTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPQGLVM*SVPSFL
Trigger: GAGAAAGGAAGGTACAGAGCACATAACCAAGCCCTG...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTTTAAAGCAAGTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSILKQVS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGACTTGCTTTAA...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTTTGCCCAGGTTGGAGTaGAATGGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFILPRLE*NGAILA
Trigger: AGCCAAGATTGCACCATTGCACTCCAACCTGGGCAA...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCCTTTCCCAGTGTCCGTaGATTTCCCAAAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSALSQCP*ISQKVK
Trigger: CTTCACTTTTTGGGAAATGCACGGACACTGGGAAAG...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR CCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATTCACTCAAGGTTGCATaGTCTTTGCTTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDSLKVA*SLLSLL
Trigger: AAGGAGAGAAAGCAAAGACCATGCAACCTTGAGTGA...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCCTAAGCCCTCATGTCTaGAGGTTTCAAGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSALSPHV*RFQGCT
Trigger: AGTACAACCTTGAAACCTCCAGACATGAGGGCTTAG...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTCTCAAACTTCATTGGTaGACAGAACGCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPLKLHW*TERSRV
Trigger: TACCCTGCTGCGTTCTGTCCACCAATGAAGTTTGAG...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACAAACTCAAACTTCATTaGTGGACAGAACGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDKLKLH*WTERSR
Trigger: CCTGCTGCGTTCTGTCCACCAATGAAGTTTGAGTTT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCAAACTCAAACTTCATTaGTGGACAGAACGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAKLKLH*WTERSR
Trigger: CCTGCTGCGTTCTGTCCACCAATGAAGTTTGAGTTT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCAGCATGAGCTCTGCCTaGACTGGCTGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATSMSSA*TGCWAL
Trigger: CAGTGCCCAGCAGCCAGTCCAGGCAGAGCTCATGCT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGTGGAACGACTGTGCTaGAAGCATTCAGAAACATCA +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAVERLC*KHSETS
Trigger: TGATGTTTCTGAATGCTTCCAGCACAGTCGTTCCAC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGACAGGCATCAATGTTaGGCCAAAGCAAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFDRHQC*AKANGQ
Trigger: CTGGCCATTTGCTTTGGCCCAACATTGATGCCTGTC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTACCGTGCTCACTGTATaGGCTGTCGCAATAGTCATC +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSITVLTV*AVAIVI
Trigger: GATGACTATTGCGACAGCCCATACAGTGAGCACGGT...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTACCGTGCTCACTGTATaGGCTGTCGCAATAGTCATC +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLITVLTV*AVAIVI
Trigger: GATGACTATTGCGACAGCCCATACAGTGAGCACGGT...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGTCTGTACCAGCATCTTaGTCCACTTCCTCCAATGTA +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWSVPAS*STSSNV
Trigger: TACATTGGAGGAAGTGGACCAAGATGCTGGTACAGA...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAAAGCTCTGTACAATGTaGAGAGCGGTGTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRKLCTM*RAVLPS
Trigger: TGAAGGCAACACCGCTCTCCACATTGTACAGAGCTT...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTACTCCAATGAGGTGTaGCATTCGGGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGYSNEV*HSGSSA
Trigger: GGCAGAAGAACCCGAATGCCACACCTCATTGGAGTA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGCCACAGACCAACACTaGCTATACTCCAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFATDQH*LYSNEV
Trigger: CACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACTTTGGAGGAGTTCGTaGAGTAGTGTAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSLWRSS*SSVTRK
Trigger: CTTTCTGGTTACACTACTCCACGAACTCCTCCAAAG...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTCTTTGGAGGAGTTCGTaGAGTAGTGTAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVLWRSS*SSVTRK
Trigger: CTTTCTGGTTACACTACTCCACGAACTCCTCCAAAG...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTGGGCCAGTTCAGGGTTaGCTCAAAGACAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIGPVQG*LKDKWR
Trigger: TCTCCATTTGTCTTTGAGCCAACCCTGAACTGGCCC...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGACAAGGTGCTGTCCTaGGCTTCTTTTTCAAAATGG +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWDKVLS*ASFSKW
Trigger: CCATTTTGAAAAAGAAGCCCAGGACAGCACCTTGTC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTCGTTCCACCGTAGGTaGACACATCAGAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKSFHRR*THQREE
Trigger: CTCCTCTCTCTGATGTGTCCACCTACGGTGGAACGA...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGATACAATTTGACTCTTaGAGCACTATATCCACTGAT +
Preference number: 4 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRIQFDS*STISTD
Trigger: ATCAGTGGATATAGTGCTCCAAGAGTCAAATTGTAT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGACAGGGAGGTGAGATaGGACATTACTGAGCACCGA +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGDREVR*DITEHR
Trigger: TCGGTGCTCAGTAATGTCCCATCTCACCTCCCTGTC...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTTTCTCAACAGGAGATaGTCGTGGCAGGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGFLNRR*SWQAEE
Trigger: CTCCTCAGCCTGCCACGACCATCTCCTGTTGAGAAA...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAACACAAGGGGTTCCTTaGGTATGTCAGAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRTQGVP*VCQRQK
Trigger: CTTCTGTCTCTGACATACCCAAGGAACCCCTTGTGT...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGAGCCTCCCGAGTAGGTaGGATTACAGTTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRSLPSR*DYSCAP
Trigger: TGGTGCACAACTGTAATCCCACCTACTCGGGAGGCT...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGCAACCTCCACCTCCCTaGTTCAAGCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGQPPPP*FKQFSC
Trigger: GCAGGAGAATTGCTTGAACCAGGGAGGTGGAGGTTG...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCTCTTCCTCTTCATGGTaGCCACGTACTAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFSSSSW*PRTKVA
Trigger: TGCCACCTTAGTACGTGGCCACCATGAAGAGGAAGA...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTaGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSV*AGSPRCPRVLK
Trigger: CTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 72 bp GTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGAATaGGATCGCAAATATCCTAGAGCTGACGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: VGCEGSIHKSPE*DRKYPRADDLL
Trigger: CAGGAGATCGTCAGCTCTAGGATATTTGCGATCCAATTCTGGCGACTTATGGATGGATCCTTCACACCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGCGAATTTCTTTGACTTaGCTTTCATACTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKRISLT*LSYSAM
Trigger: CATAGCCGAGTATGAAAGTCAAGTCAAAGAAATTCG...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCATAGTACTTGAAAACTaGGGCATTGGTGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAIVLEN*GIGGFK
Trigger: CTTGAAGCCACCAATGCCTCAGTTTTCAAGTACTAT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACTGGCTGCTGGGCACTaGCCTGGCACACCTCATCAC +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRLAAGH*PGTPHH
Trigger: GTGATGAGGTGTGCCAGGTCAGTGCCCAGCAGCCAG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGGAATAACCTGTCCTaGGTCCTTGACGAATGTTTC +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIGNNLS*VLDECF
Trigger: GAAACATTCGTCAAGGACTCAGGACAGGTTATTCCC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGGGGAACCAGACACTCTaGAAATCCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKGNQTL*KSPDAE
Trigger: TTCAGCATCAGGGGATTTTCAGAGTGTCTGGTTCCC...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACACTGTGATAGATGATTaGGGAAGGCAAAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYTVIDD*GRQRGT
Trigger: GGTACCTCTTTGCCTTCCTCAATCATCTATCACAGT...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGGGAGGCACCCTTCTTaGAGGATAGTTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSGRHPS*RIVLWQ
Trigger: CTGCCAGAGAACTATCCTTCAAGAAGGGTGCCTCCC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTTGGCTCAGAGTGTCTaGAAACGTATCATCCATATC +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLLAQSV*KRIIHI
Trigger: GATATGGATGATACGTTTTCAGACACTCTGAGCCAA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCAGGTCACAACCTTTCTaGCTCAGCTGGGCTACATTA +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGRSQPF*LSWATL
Trigger: TAATGTAGCCCAGCTGAGTCAGAAAGGTTGTGACCT...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTAAGAAGTTGTGGTTGTaGGGTACACAACTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIKKLWL*GTQLGE
Trigger: CTCACCCAGTTGTGTACCTCACAACCACAACTTCTT...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAAGAAGTTGTGGTTGTaGGGTACACAACTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFKKLWL*GTQLGE
Trigger: CTCACCCAGTTGTGTACCTCACAACCACAACTTCTT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATAGTCCTCACTCACTCTaGGGTCATACCCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNSPHSL*GHTLHL
Trigger: CAAATGAAGGGTATGACCTCAGAGTGAGTGAGGACT...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGAGGTGAGTCTTTACTaGGTCCTCACTCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGEVSLY*VLTHSE
Trigger: CTCAGAGTGAGTGAGGACTCAGTAAAGACTCACCTC...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCATTCTGGATTCTTTGTaGAGTGGCCACCTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLILDSL*SGHLVL
Trigger: TAAGACAAGGTGGCCACTTCACAAAGAATCCAGAAT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTTATAAAGAAGGGCTGTaGACCTTCTCAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIYKEGL*TFSAAV
Trigger: CACTGCAGCTGAGAAGGTTCACAGCCCTTCTTTATA...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGGATGTGCAAAGCTGTTaGATGGTGTTGACACTGAAC +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWDVQSC*MVLTLN
Trigger: GTTCAGTGTCAACACCATTCAACAGCTTTGCACATC...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACTTGGATTTCCAAGGCTaGTCAGATGAAAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDLDFQG*SDESFF
Trigger: GAAGAAACTTTCATCTGATCAGCCTTGGAAATCCAA...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCGTGAAGAACAAACCTaGCTGTATACTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYREEQT*LYTEAC
Trigger: ACAGGCTTCAGTATACAGTCAGGTTTGTTCTTCACG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGCATTTAGAGGGACATaGTTTTTACACAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWAFRGT*FLHKGF
Trigger: GAACCCCTTGTGTAAAAATCATGTCCCTCTAAATGC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGGATAATTGCATCCTCTaGCCCAGTGATTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQDNCIL*PSDFTF
Trigger: AAAAGTGAAATCACTGGGTCAGAGGATGCAATTATC...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATCGGCAATATTTGTCATaGGCCTTACAGATAATTGCA +
Preference number: 4 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDRQYLS*ALQIIA
Trigger: TGCAATTATCTGTAAGGCTCATGACAAATATTGCCG...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTTTGGCCTCCAAAATCTaGTCTCTGTCCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFILASKI*SLSTFW
Trigger: CCAGAATGTGGACAGAGATCAGATTTTGGAGGCCAA...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGCTAATGGGTATGAGGTaGTATCTCATTGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQLMGMR*YLIVVL
Trigger: CAAAACCACAATGAGATATCACCTCATACCCATTAG...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACTTTCATCCTGTAGATaGGTACCCTTGGGTATCCAT +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRLSSCR*VPLGIH
Trigger: ATGGATACCCAAGGGTACTCATCTACAGGATGAAAG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAACTGCTTGGAAAGCTTaGATCCTCTCTCATACGTTA +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSTAWKA*ILSHTL
Trigger: TAACGTATGAGAGAGGATTCAAGCTTTCCAAGCAGT...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGATAATGAGCCACTCTaGGAAAATCTTCCTCACCTA +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSADNEPL*ENLPHL
Trigger: TAGGTGAGGAAGATTTTCTCAGAGTGGCTCATTATC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCAGCTGTTCCGGGTTTaGTTTCAATGGGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYQLFRV*FQWASF
Trigger: AAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTCGCATCTCCGTTTGCTaGTCCAGGCATTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIRISVC*SRHFCC
Trigger: ACAACAAAAATGCCTGGAGCAGCAAACGGAGATGCG...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCGATGTCACTCAAGGTTaGATGGTCTTTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLDVTQG*MVFAFS
Trigger: AGAGAAAGCAAAGACCATGCAACCTTGAGTGACATC...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGATGTCACTCAAGGTTaGATGGTCTTTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSADVTQG*MVFAFS
Trigger: AGAGAAAGCAAAGACCATGCAACCTTGAGTGACATC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGTGGCAAGGCGGGACTaGAACTGTTGGTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRVARRD*NCWYLS
Trigger: GCTCAGGTACCAACAGTTGCAGTCCCGCCTTGCCAC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCATATCTTGTATCGTCTaGAAGGTGGCTTCAGTCGTT +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAISCIV*KVASVV
Trigger: AACGACTGAAGCCACCTTGCAGACGATACAAGATAT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTCTGTGGAACGACTGTaGTGGAAGCATTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPSVERL*WKHSET
Trigger: TGTTTCTGAATGCTTCCAGCACAGTCGTTCCACAGA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGCTCTTCTCTTGGCGATaGTGGGTTTACTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKLFSWR*WVYSGR
Trigger: CCTACCTGAGTAAACCCAGCATCGCCAAGAGAAGAG...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTTCTTGAGGGAGTCGTaGCGGCTGATGTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSFLRES*RLMLVR
Trigger: CCTGACCAACATCAGCCGGCACGACTCCCTCAAGAA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTTGAAGCCCGTGTATTaGCCTGATGACGTGGACCTT +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKLKPVY*PDDVDL
Trigger: AAGGTCCACGTCATCAGGGCAATACACGGGCTTCAA...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTGCTGGAGGCTTCAGCTaGACGCCCATTCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPAGGFS*TPILGA
Trigger: GGCACCCAGAATGGGCGTGCAGCTGAAGCCTCCAGC...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTGTGGAGAGCGGTGTTaGCTTCATTACAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKCGERC*LHYKWC
Trigger: GCACCACTTGTAATGAAGGCAACACCGCTCTCCACA...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGTCAAAAGAGAACACTaGATGAACCAAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFVKREH*MNQGLR
Trigger: CCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTGAC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTGGGCGTGCAATTGGCTaGCAGTTTGAAATGAAACCA +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIGRAIG*QFEMKP
Trigger: TGGTTTCATTTCAAACTGGCAGCCAATTGCACGCCC...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCAGCAGCACGACTCCTaGCGGCCAAGACAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSQQHDS*RPRQQS
Trigger: ACTTTGCTGTCTTGGCCGGCAGGAGTCGTGCTGCTG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGACCTCCCCTGTGTGCTaGCTCTGTGGCTATAAAGAA +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKTSPVC*LCGYKE
Trigger: TTCTTTATAGCCACAGAGGCAGCACACAGGGGAGGT...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAAAAATGGCCTCTCACTaGTATGGTCAGGAATCAATG +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSKMASH*YGQESM
Trigger: CATTGATTCCTGACCATAGCAGTGAGAGGCCATTTT...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACGGGGGCATTCACAAATaGACGGTTCATATATTTTCT +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDGGIHK*TVHIFS
Trigger: AGAAAATATATGAACCGTGCATTTGTGAATGCCCCC...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGACACGGGCGAATGCGATaGTGTCAGCAGCACATGAGC +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRHGRMR*CQQHMS
Trigger: GCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTG...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGCTGATAATGTGCTATTaGTTAAACTGGGTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLLIMCY*LNWVVD
Trigger: ATCCACCACCCAGTTTAAGCAATAGCACATTATCAG...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTCGATCTCCTGGATCATaGTGCCATAACTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIRSPGS*CHNCLQ
Trigger: TTGAAGGCAGTTATGGCAGCATGATCCAGGAGATCG...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGGTTTCTACCTCTTTCTaGCACCTCATTCTTACACTT +
Preference number: 4 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQVSTSF*HLILTL
Trigger: AAGTGTAAGAATGAGGTGGCAGAAAGAGGTAGAAAC...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGGGCTCTGCCTTTTCATaGTGTTTCTACCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWGSAFS*CFYLFL
Trigger: CAGAAAGAGGTAGAAACAGCATGAAAAGGCAGAGCC...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCGGGTTTGCTTTCAATaGGCAAGTTTTGTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYRVCFQ*ASFVQW
Trigger: CCACTGAACAAAACTTGCCCATTGAAAGCAAACCCG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCATACCAGCAGTTCACTaGAGACAACAGGTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFIPAVH*RQQVLV
Trigger: GACCAGAACCTGTTGTCTCCAGTGAACTGCTGGTAT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTCTTTCTCTCCTTACTTaGTTCAGGAGCAAATACCAG +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVLSLLT*FRSKYQ
Trigger: CTGGTATTTGCTCCTGAACCAAGTAAGGAGAGAAAG...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTAGGTTTCAGAGACAGTaGACTTCACTGATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPRFQRQ*TSLILW
Trigger: CCACAGAATCAGTGAAGTCCACTGTCTCTGAAACCT...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTTCATCTTCACTTGTGTaGGGCTCTGTACCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSISSSLV*GSVPAS
Trigger: AGATGCTGGTACAGAGCCCCACACAAGTGAAGATGA...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGCTATTGCTTCTATTaGCTCACATTCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGYCFY*LTFIFT
Trigger: AGTGAAGATGAATGTGAGCCAATAGAAGCAATAGCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCCAACATAGTCAAACTTaGCTATTGCTTCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLQHSQT*LLLLLA
Trigger: AGCCAATAGAAGCAATAGCCAAGTTTGACTATGTTG...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATCACTGTCGGCTTTTTaGCTCAGAGTGTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRSLSAF*LRVSEN
Trigger: GTTTTCAGACACTCTGAGCCAAAAAGCCGACAGTGA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTGGAAGTGGCAGGGGTaGGAGAGTTTTTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGWKWQG*ESFSLA
Trigger: AGCAAGTGAAAAACTCTCCCACCCCTGCCACTTCCA...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGTCACCTCCCTTTATaGCCTTGCTTGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFSHLPL*PCLAGF
Trigger: AAAACCAGCCAAGCAAGGCCATAAAGGGAGGTGACT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATGACAAGGTGCTGTCCTaGGCTTCTTTTTCAAAATGG +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYDKVLS*ASFSKW
Trigger: CCATTTTGAAAAAGAAGCCCAGGACAGCACCTTGTC...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGAAAGCTCAGGAGAAATaGGGAGGGGCTAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGKAQEK*GGARQG
Trigger: ACCTTGTCTAGCCCCTCCCCATTTCTCCTGAGCTTT...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTATTCAAAGACACCTCTaGCCCTTTGATGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIIQRHL*PFDALC
Trigger: ACAGAGGGCATCAAAGGGCCAGAGGTGTCTTTGAAT...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACCCTTCTCAGCTGCAGTaGCTTTTAATGAGCTTTACT +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDPSQLQ*LLMSFT
Trigger: AGTAAAGCTCATTAAAAGCCACTGCAGCTGAGAAGG...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGTCTCAGGGTTTCTGTaGTGGATAATCGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWVSGFL*WIIENK
Trigger: CTTGTTTTCGATTATCCACCACAGAAACCCTGAGAC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTAACTTGGGAGGTGGGTaGCAGGTGGTCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSNLGGG*QVVWSR
Trigger: CCTACTCCAGACCACCTGCCACCCACCTCCCAAGTT...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTGCTTCTTGCTTATGGTaGTACAGTCACAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVASCLW*YSHSEC
Trigger: ACATTCACTGTGACTGTACCACCATAAGCAAGAAGC...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCTGTCATGTTCCTTTTTaGAAACTTCCAATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLCHVPF*KLPMAF
Trigger: GAAAGCCATTGGAAGTTTCCAAAAAGGAACATGACA...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTCAAACGTGAATACTTaGTTGTACATCCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLSNVNT*LYILAN
Trigger: GTTGGCCAGGATGTACAACCAAGTATTCACGTTTGA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACAAAATTAGCTGGGTGTaGTTGTGCGCACTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYKISWV*LCALVV
Trigger: GACTACAAGTGCGCACAACCACACCCAGCTAATTTT...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCATCCCTTTGTTACAGTaGGGGTCTGAAGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGIPLLQ*GSEGVL
Trigger: CAACACTCCTTCAGACCCCCACTGTAACAAAGGGAT...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGCATTTCCACTTACACTaGGAATTACTAGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWHFHLH*ELLGGH
Trigger: ATGTCCTCCTAGTAATTCCCAGTGTAAGTGGAAATG...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGACCAGGACCCAGCCACTaGCAAACAGAGTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRPGPSH*QTESGL
Trigger: AAGCCCAGACTCTGTTTGCCAGTGGCTGGGTCCTGG...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTATAGTACTTGAAAACTaGGGCATTGGTGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPIVLEN*GIGGFK
Trigger: CTTGAAGCCACCAATGCCTCAGTTTTCAAGTACTAT...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACATGAATATAGTACTTaGAAACTGAGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSHEYST*KLRHWW
Trigger: CCACCAATGCCTCAGTTTTCAAGTACTATATTCATG...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATCATAGTCCTCGATGGTaGCCATATCTTGTATCGTCT +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNHSPRW*PYLVSS
Trigger: AGACGATACAAGATATGGTCACCATCGAGGACTATG...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCCTGTACTGTGATAGATaGTTGAGGAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFLYCDR*LRKAKR
Trigger: CCTCTTTGCCTTCCTCAATCATCTATCACAGTACAG...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTGGCTTGTGGTCATTaGAGCCCGTGTATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSVACGH*SPCIAL
Trigger: CAGGGCAATACACGGGCTTCAATGACCACAAGCCAC...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGAGGCTCGGAGCTCCTaGGGGCAACGTTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHREARSS*GQRCAK
Trigger: CTTTGCACAACGTTGCCCTCAGGAGCTCCGAGCCTC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGTGCTACGTCGAATCTaGGGCTCGGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRVLRRI*GSELLR
Trigger: CCTCAGGAGCTCCGAGCCTCAGATTCGACGTAGCAC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAAATTGGCTGCCAGTTTaGAATGAAACCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSNWLPV*NETKKE
Trigger: TTCCTTCTTGGTTTCATTTCAAACTGGCAGCCAATT...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACTTCCTAAGGAATTTGTaGGGATTGTTTAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDFLRNL*GLFKRA
Trigger: AGCCCTTTTAAACAATCCTCACAAATTCCTTAGGAA...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGATGAATCTCCTTCAGTaGGTTCTATGGATGGGATGT +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWMNLLQ*VLWMGC
Trigger: ACATCCCATCCATAGAACTCACTGAAGGAGATTCAT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGTTAACGGATACAATTTaGCTCTTGGAGCACTATATC +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWLTDTI*LLEHYI
Trigger: GATATAGTGCTCCAAGAGTCAAATTGTATCCGTTAA...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGAATCGAAAACAAGACTaGGTCCTAAGCACATTTCCT +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWNRKQD*VLSTFP
Trigger: AGGAAATGTGCTTAGGACTCAGTCTTGTTTTCGATT...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTTTTGCTTTATGGATCTaGCAAAACTTCGCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVFALWI*QNFAKV
Trigger: GACTTTGGCGAAGTTTTGTCAGATCCATAAAGCAAA...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTAGGAAAGGACAATACTaGTTTAATTACGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIRKGQY*FNYAGS
Trigger: GCTGCCCGCGTAATTAAATCAGTATTGTCCTTTCCT...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGAGATGGGACATTACTaGGCACCGAGGCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRREMGHY*APRHRK
Trigger: CTTCCTGTGCCTCGGTGCTCAGTAATGTCCCATCTC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTCGTGAAGAACAAACCTaGCTGTATACTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIREEQT*LYTEAC
Trigger: ACAGGCTTCAGTATACAGTCAGGTTTGTTCTTCACG...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGAACAACTCTACAGACTaGTTTGGGCATTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWNNSTD*FGHLFL
Trigger: CAGGAACAAATGCCCAAATCAGTCTGTAGAGTTGTT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTCACTATCTAGCTGTGTaGCCAGGGCAAGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFIHYLAV*PGQVFN
Trigger: GTTAAACACTTGCCCTGGTCACACAGCTAGATAGTG...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGCAGTTATCAACACCTaGAATTATTTTGCCGGTTTA +
Preference number: 4 (lower is better)
Translates to: STPDRQLLGVKDPSISRQAVINT*NYFAGL
Trigger: TAAACCGGCAAAATAATTTCAGGTGTTGATAACTGC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCCACATCAGGATATTCTaGAATTTCAGAAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAHIRIF*NFRNPE
Trigger: CTCAGGGTTTCTGAAATTTCAGAATATCCTGATGTG...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAAGGTTGCATGGTCTTTaGTTTCTCTCCTTACTTGGT +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRRLHGL*FLSLLG
Trigger: ACCAAGTAAGGAGAGAAAGCAAAGACCATGCAACCT...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGAATCCTCACTTATCTaGATGAACCGCATAATCACA +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWESSLI*MNRIIT
Trigger: TGTGATTATGCGGTTCATGCAGATAAGTGAGGATTC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTCCTCCAATGTACCGTaGTCACTGTATGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSSSNVP*SLYGLS
Trigger: CGACAGCCCATACAGTGAGCACGGTACATTGGAGGA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCATCAGGGGCATGCTTTaGTGTGCTCTGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSIRGML*CALSLQ
Trigger: CTGGAGAGACAGAGCACAGCAAAGCATGCCCCTGAT...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGGGGCGTGCAATTGGCTaGCAGTTTGAAATGAAACCA +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRGRAIG*QFEMKP
Trigger: TGGTTTCATTTCAAACTGGCAGCCAATTGCACGCCC...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTTAGGCTCTCAGCTATaGAGTAGACTTAGAGAACAA +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLLGSQL*SRLREQ
Trigger: TTGTTCTCTAAGTCTACTGCATAGCTGAGAGCCTAA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACGAACCATTACACATTTaGCATTTGGCACATACAGAG +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDEPLHI*HLAHTE
Trigger: CTCTGTATGTGCCAAATGGCAAATGTGTAATGGTTC...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCCGGGTTTGCTTTCAATaGGCAAGTTTTGTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGRVCFQ*ASFVQW
Trigger: CCACTGAACAAAACTTGCCCATTGAAAGCAAACCCG...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACTTTCTCTCCTTACTTaGTTCAGGAGCAAATACCAG +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRLSLLT*FRSKYQ
Trigger: CTGGTATTTGCTCCTGAACCAAGTAAGGAGAGAAAG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTCTTTCTCTCCTTACTTaGTTCAGGAGCAAATACCAG +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPLSLLT*FRSKYQ
Trigger: CTGGTATTTGCTCCTGAACCAAGTAAGGAGAGAAAG...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGTCACTCAAGGTTGCATaGTCTTTGCTTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWSLKVA*SLLSLL
Trigger: AAGGAGAGAAAGCAAAGACCATGCAACCTTGAGTGA...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCGAATATGGAAGACTaGATCACCAGATCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYSNMED*ITRSPN
Trigger: ATTGGGAGATCTGGTGATCCAGTCTTCCATATTCGA...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTCCTCTAGTCGAATATaGAAGACTGGATCACCAGAT +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPSSSRI*KTGSPD
Trigger: ATCTGGTGATCCAGTCTTCCATATTCGACTAGAGGA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAAAACTGAGGCATTGGTaGCTTCAAGTGTTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRKLRHW*LQVLGD
Trigger: ATCTCCTAACACTTGAAGCCACCAATGCCTCAGTTT...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACTTCACTGATTCTGTaGAACGACTGTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFITSLIL*NDCAGS
Trigger: GCTTCCAGCACAGTCGTTCCACAGAATCAGTGAAGT...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTAGGTTTCAGAGACAGTaGACTTCACTGATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIRFQRQ*TSLILW
Trigger: CCACAGAATCAGTGAAGTCCACTGTCTCTGAAACCT...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCTTCTCTTGGCGATGCTaGGTTTACTCAGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFFSWRC*VYSGRF
Trigger: AAACCTACCTGAGTAAACCCAGCATCGCCAAGAGAA...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGGCTATTGCTTCTATTaGCTCACATTCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSGYCFY*LTFIFT
Trigger: AGTGAAGATGAATGTGAGCCAATAGAAGCAATAGCC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTCACTGTCGGCTTTTTaGCTCAGAGTGTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGSLSAF*LRVSEN
Trigger: GTTTTCAGACACTCTGAGCCAAAAAGCCGACAGTGA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATCTCTTTTTCGTTGCCTaGCTAAATAGCCGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNLFFVA*LNSRQD
Trigger: ATCCTGACGGCTATTTAGCCAGGCAACGAAAAAGAG...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTCTCTTTTTCGTTGCCTaGCTAAATAGCCGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSILFFVA*LNSRQD
Trigger: ATCCTGACGGCTATTTAGCCAGGCAACGAAAAAGAG...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGGGTCCAGTGGCTTGTaGTCATTGAAGCCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSGSSGL*SLKPVY
Trigger: ATACACGGGCTTCAATGACCACAAGCCACTGGACCC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGTTTGTAAGTGTAGATaGGGGGACTTGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIVCKCR*GDLEIS
Trigger: GGAGATTTCCAAGTCCCCCCATCTACACTTACAAAC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAATGGAGAGGACAGTTaGGATTTCAAATTTAGGATC +
Preference number: 4 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLNGEDS*DFKFRI
Trigger: GATCCTAAATTTGAAATCCCAACTGTCCTCTCCATT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGGATTCTTTGTGAAGTaGCCACCTTGTCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYGFFVK*PPCLIS
Trigger: AGAGATAAGACAAGGTGGCCACTTCACAAAGAATCC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCCTTCTCAGCTGCAGTaGCTTTTAATGAGCTTTACT +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYPSQLQ*LLMSFT
Trigger: AGTAAAGCTCATTAAAAGCCACTGCAGCTGAGAAGG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGGGCCTCTCACTGCTATaGTCAGGAATCAATGAGCAT +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRGLSLL*SGINEH
Trigger: ATGCTCATTGATTCCTGACCATAGCAGTGAGAGGCC...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCTCAGGGTTTCTGTGGTaGATAATCGAAAACAAGACT +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSASGFLW*IIENKT
Trigger: AGTCTTGTTTTCGATTATCCACCACAGAAACCCTGA...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCAGCTCTATTTACGCCTaGGTAGAGACTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGSSIYA*VETSKL
Trigger: CAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCT...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTTCGAAACACTCGAGTaGGCAGCAGGAATTGGGAGG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSFETLE*AAGIGR
Trigger: CCTCCCAATTCCTGCTGCCCACTCGAGTGTTTCGAA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGTTTGTACAACTTTGCTaGAAAACAGGTCGGCAATAT +
Preference number: 4 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWFVQLC*KTGRQY
Trigger: ATATTGCCGACCTGTTTTCCAGCAAAGTTGTACAAA...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGTGGGGACCCACGTGTaGCTTTTGAGCAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRVGTHV*LLSRVM
Trigger: CATTACCCTGCTCAAAAGCCACACGTGGGTCCCCAC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGAAAGGTAGCTTGCTATaGCTGAAACTAAAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWKGSLL*LKLKVP
Trigger: CGGAACCTTTAGTTTCAGCCATAGCAAGCTACCTTT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACCTCTTCCTTTTCACATaGCTGGTTCCTTCTCATTAT +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDLFLFT*LVPSHY
Trigger: ATAATGAGAAGGAACCAGCCATGTGAAAAGGAAGAG...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAAAACTAGCTGGGCATaGTTGCATGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFKTSWA*LHAPVI
Trigger: GATTACAGGTGCATGCAACCATGCCCAGCTAGTTTT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACAAGCTGGAGTGCCGTaGCGTGACCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRQAGVP*RDLGSL
Trigger: CAGTGAGCCAAGGTCACGCCACGGCACTCCAGCTTG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGCACGTTCAGATAGATaGCTTATTATTCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSARSDR*LIIPCC
Trigger: ACAACAGGGAATAATAAGCCATCTATCTGAACGTGC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTTTCGCCATTGACCCCTaGCAGTTGGTAACATTTTCA +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIFAIDP*QLVTFS
Trigger: TGAAAATGTTACCAACTGCCAGGGGTCAATGGCGAA...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTTAACTACTATTATCTaGCCTCTTTATTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLLTTII*PLYCPH
Trigger: GTGGGGGCAATAAAGAGGCCAGATAATAGTAGTTAA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGAAAGGCCTCTTCAGCTaGCCTTCACCTTTTACGCAT +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKKGLFS*PSPFTH
Trigger: ATGCGTAAAAGGTGAAGGCCAGCTGAAGAGGCCTTT...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR TCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTCATGAATATAGTACTTaGAAACTGAGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPHEYST*KLRHWW
Trigger: CCACCAATGCCTCAGTTTTCAAGTACTATATTCATG...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGACAGTGGACTTCACTaGTTCTGTGGAACGACTGTG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSDSGLH*FCGTTV
Trigger: CACAGTCGTTCCACAGAATCAGTGAAGTCCACTGTC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCCTTAGTATTATACTGTaGGCGGGGCCTGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSLSIIL*AGPGLP
Trigger: AGGAAGTCCAGGCCCCGCTCACAGTATAATACTAAG...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCCAGAACGCCAGCAACTaGGTTAATATCATGGTTACT +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGQNASN*VNIMVT
Trigger: AGTAACCATGATATTAACTCAGTTGCTGGCGTTCTG...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTTTGGCTCAGAGTGTCTaGAAACGTATCATCCATATC +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFILAQSV*KRIIHI
Trigger: GATATGGATGATACGTTTTCAGACACTCTGAGCCAA...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAGTGCTACGTCGAATCTaGGGCTCGGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTVLRRI*GSELLR
Trigger: CCTCAGGAGCTCCGAGCCTCAGATTCGACGTAGCAC...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATATTCTGGATTCTTTGTaGAGTGGCCACCTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNILDSL*SGHLVL
Trigger: TAAGACAAGGTGGCCACTTCACAAAGAATCCAGAAT...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTGATGTGCAAAGCTGTTaGATGGTGTTGACACTGAAC +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFIDVQSC*MVLTLN
Trigger: GTTCAGTGTCAACACCATTCAACAGCTTTGCACATC...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTTTAACGGATACAATTTaGCTCTTGGAGCACTATATC +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVLTDTI*LLEHYI
Trigger: GATATAGTGCTCCAAGAGTCAAATTGTATCCGTTAA...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTCATCACACTACACACTaGACTTGGATGAATGCTCTA +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIHHTTH*TWMNAL
Trigger: TAGAGCATTCATCCAAGTTCAGTGTGTAGTGTGATG...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCGTCATTGTACAATTTTaGATGTGCCACTGGACCACT +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGVIVQF*MCHWTT
Trigger: AGTGGTCCAGTGGCACATTCAAAATTGTACAATGAC...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGGACACAGAGGTGAGTaGAATAGAGATTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFGHRGE*NRDLYS
Trigger: AGAGTACAAATCTCTATTTCACTCACCTCTGTGTCC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTCCATATTGTGGCATATaGCAGGAATTCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GVDTEREHGALQSATQQVPYCGI*QEFLLF
Trigger: AAAAAGAAGGAATTCCTGTCATATGCCACAATATGG...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCAAAACATGGCAAATGTaGTTTTCCATGTGTACCAAC +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLKTWQM*FSMCTN
Trigger: GTTGGTACACATGGAAAATCACATTTGCCATGTTTT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCATTTTAACCCACAAGTaGCACAGATCATTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAILTHK*HRSFLL
Trigger: GAGCAAAAATGATCTGTGTCACTTGTGGGTTAAAAT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCATCTCAATCAGGAAGCTaGTTAAGGATATACTGTGTT +
Preference number: 4 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSSQSGS*LRIYCV
Trigger: AACACAGTATATCCTTAATCAGCTTCCTGATTGAGA...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCCATTTGTCCCTCTGTTaGTGGACATTTGCATTGCTT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFHLSLC*WTFALL
Trigger: AAGCAATGCAAATGTCCATCAACAGAGGGACAAATG...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACGGCACATACAGAGACTaGCATCTGGTAATTTTTATT +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDGTYRD*HLVIFI
Trigger: AATAAAAATTACCAGATGTCAGTCTCTGTATGTGCC...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR GCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCCAGATCTCCCAATTTaGTTTTCCTCTTGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYPDLPI*FSSCFS
Trigger: CGAAAAACAAGAGGAAAAGCAAATTGGGAGATCTGG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTGTCAAACTTGGCTATTaGTTCTATTGGCTCACATTC +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPVKLGY*FYWLTF
Trigger: GAATGTGAGCCAATAGAAGCAATAGCCAAGTTTGAC...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCTGGTTTTTACATTGTaGATGACTTGTCTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYLVFTL*MTCLLD
Trigger: GTCCAACAGACAAGTCATGCACAATGTAAAAACCAG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGCCTCAGGTGCTTCTTaGTGCCTTCATTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSASGAS*CLHFHR
Trigger: TCTGTGGAAATGAAGGCAGCAAGAAGCACCTGAGGC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTAGGTGTGCACCACCATaGCTGGGCTTTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSRCAPP*LGFVAC
Trigger: ACATGCTACAAAGCCCAGGCATGGTGGTGCACACCT...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTCATGCTGCCATAACTaGCTTCAAGATGTTAATACT +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLSCCHN*LQDVNT
Trigger: AGTATTAACATCTTGAAGGCAGTTATGGCAGCATGA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCAAATTTGTACAACTTTaGTGGAAAACAGGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAKFVQL*WKTGRQ
Trigger: TTGCCGACCTGTTTTCCAGCAAAGTTGTACAAATTT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTTACAGAGGTCAGAATaGAGCAGTGGTTATGAGCAT +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGLQRSE*SSGYEH
Trigger: ATGCTCATAACCACTGCTGCATTCTGACCTCTGTAA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACTGGCAATCACCATTCTaGTTTCTGTTTATAAGAGTT +
Preference number: 4 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDWQSPF*FLFIRV
Trigger: AACTCTTATAAACAGAAAGCAGAATGGTGATTGCCA...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTTGACATGTTCCAAATaGTCCGTAAGTTGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGLTCSK*SVSCQG
Trigger: GCCTTGACAACTTACGGAGCATTTGGAACATGTCAA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGGATGACCATCCTCCATaGAGTGACTTAACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRDDHPP*SDLTVC
Trigger: ACAGACTGTTAAGTCACTGCATGGAGGATGGTCATC...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGGATGGACATTTGCATTaGTTCTATCATTTGGCTATT +
Preference number: 4 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKDGHLH*FYHLAI
Trigger: AATAGCCAAATGATAGAAGCAATGCAAATGTCCATC...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCCTGTTGATGGACATTTaGATTGCTTCTATCATTTGG +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLLLMDI*IASIIW
Trigger: CCAAATGATAGAAGCAATGCAAATGTCCATCAACAG...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTAAACTGAGGCATTGGTaGCTTCAAGTGTTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIKLRHW*LQVLGD
Trigger: ATCTCCTAACACTTGAAGCCACCAATGCCTCAGTTT...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTCTAAGCCCTCATGTCTaGAGGTTTCAAGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFILSPHV*RFQGCT
Trigger: AGTACAACCTTGAAACCTCCAGACATGAGGGCTTAG...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGGTGGAACGACTGTGCTaGAAGCATTCAGAAACATCA +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRVERLC*KHSETS
Trigger: TGATGTTTCTGAATGCTTCCAGCACAGTCGTTCCAC...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCCTTAGGGGGAACATTTaGAGGCCTTGTAGTCATATA +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGLRGNI*RPCSHI
Trigger: TATATGACTACAAGGCCTCCAAATGTTCCCCCTAAG...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTCTGTACCAGCATCTTaGTCCACTTCCTCCAATGTA +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRSVPAS*STSSNV
Trigger: TACATTGGAGGAAGTGGACCAAGATGCTGGTACAGA...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCAACATAGTCAAACTTaGCTATTGCTTCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWQHSQT*LLLLLA
Trigger: AGCCAATAGAAGCAATAGCCAAGTTTGACTATGTTG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTTCACTGTCGGCTTTTTaGCTCAGAGTGTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFISLSAF*LRVSEN
Trigger: GTTTTCAGACACTCTGAGCCAAAAAGCCGACAGTGA...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGGGAGTTCATGTCCTTaGATGAGGACTTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSGSSCP*MRTCLP
Trigger: CGGAAGACAAGTCCTCATCCAAGGACATGAACTCCC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGCTCTTTTTCGTTGCCTaGCTAAATAGCCGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKLFFVA*LNSRQD
Trigger: ATCCTGACGGCTATTTAGCCAGGCAACGAAAAAGAG...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTGGAAGTGGCAGGGGTaGGAGAGTTTTTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSWKWQG*ESFSLA
Trigger: AGCAAGTGAAAAACTCTCCCACCCCTGCCACTTCCA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGCCACAGACCAACACTaGCTATACTCCAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSATDQH*LYSNEV
Trigger: CACCTCATTGGAGTATAGCCAGTGTTGGTCTGTGGC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGCTTTGGAGGAGTTCGTaGAGTAGTGTAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRLWRSS*SSVTRK
Trigger: CTTTCTGGTTACACTACTCCACGAACTCCTCCAAAG...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGGGCCAGTTCAGGGTTaGCTCAAAGACAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSGPVQG*LKDKWR
Trigger: TCTCCATTTGTCTTTGAGCCAACCCTGAACTGGCCC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTGTGAGGTACACAACTaGGTGAGAACCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSCEVHN*VRTTRP
Trigger: TGGCCTTGTGGTTCTCACCCAGTTGTGTACCTCACA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCGGATTCTTTGTGAAGTaGCCACCTTGTCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFGFFVK*PPCLIS
Trigger: AGAGATAAGACAAGGTGGCCACTTCACAAAGAATCC...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTAGTGAGTTCTATGGATaGGATGTGAACACACAGTTA +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPSEFYG*DVNTQL
Trigger: TAACTGTGTGTTCACATCCCATCCATAGAACTCACT...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATCAGGGTTTCTGTGGTaGATAATCGAAAACAAGACT +
Preference number: 4 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRSGFLW*IIENKT
Trigger: AGTCTTGTTTTCGATTATCCACCACAGAAACCCTGA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGGGTGGCAGGTGGTCTaGAGTAGGGAGCTCTATTTA +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSGWQVV*SRELYL
Trigger: TAAATAGAGCTCCCTACTCCAGACCACCTGCCACCC...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTAACTTGGGAGGTGGGTaGCAGGTGGTCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLANLGGG*QVVWSR
Trigger: CCTACTCCAGACCACCTGCCACCCACCTCCCAAGTT...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGACAGGGAGGTGAGATaGGACATTACTGAGCACCGA +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRDREVR*DITEHR
Trigger: TCGGTGCTCAGTAATGTCCCATCTCACCTCCCTGTC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGTACTCAATACATGTTaGCTATTGACATGCAACGTG +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYVLNTC*LLTCNV
Trigger: CACGTTGCATGTCAATAGCCAACATGTATTGAGTAC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGTCTCTGTCCACATTCTaGCCTTTATTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWSLSTF*PLFSSP
Trigger: TGGAGATGAAAATAAAGGCCAGAATGTGGACAGAGA...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTTAAGTACCTTACTTTaGCCTCCAAAATCTGATCTC +
Preference number: 4 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLLSTLL*PPKSDL
Trigger: GAGATCAGATTTTGGAGGCCAAAGTAAGGTACTTAA...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTACACATTTGCCATTTaGCACATACAGAGACTGACA +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPYTFAI*HIQRLT
Trigger: TGTCAGTCTCTGTATGTGCCAAATGGCAAATGTGTA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543397.1
3UTR CAA 72 bp GAGCACAGTAGCTTCTGGGATGCTGATAATGTGCTATaGCTTAAACTGGGTGGTGGATACATCAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: EHSSFWDADNVL*LKLGGGYISVS
Trigger: TGACACACTGATGTATCCACCACCCAGTTTAAGCAATAGCACATTATCAGCATCCCAGAAGCTACTGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp AACTGCCTTCAAGATGTTAATACTGAACAAGGCATGTaGTTTCAGCACTGCGGGAGGAGCAATCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NCLQDVNTEQGM*FQHCGRSNLSS
Trigger: GGAAGAGAGATTGCTCCTCCCGCAGTGCTGAAACAACATGCCTTGTTCAGTATTAACATCTTGAAGGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp GGAGCACACAGCATCACATTTTCAAAGAAAGGTAGCTaGCTATGGCTGAAACTAAAGGTTCCGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GAHSITFSKKGS*LWLKLKVPKRR
Trigger: CCTCCTCTTCGGAACCTTTAGTTTCAGCCATAGCAAGCTACCTTTCTTTGAAAATGTGATGCTGTGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCAGGGTACATCTCCATaGATCTCTGCTTATCGCTCC +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSQGTSP*ISAYRS
Trigger: GGAGCGATAAGCAGAGATTCATGGAGATGTACCCTG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCCTGTCCTGAGTCCTTaGCGAATGTTTCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSPVLSP*RMFPNP
Trigger: GGGATTTGGAAACATTCGTCAAGGACTCAGGACAGG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGGGAACCAGACACTCTaGAAATCCCCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSGNQTL*KSPDAE
Trigger: TTCAGCATCAGGGGATTTTCAGAGTGTCTGGTTCCC...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGCCTGGCAAGACACTTaGTCCTGTATTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRAWQDT*SCISGT
Trigger: TGTCCCAGAAATACAGGATCAAGTGTCTTGCCAGGC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTCAGGACTGTCATTGTTaGGGCCACGGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPQDCHC*GHGSAA
Trigger: TGCTGCAGAACCGTGGCCTCAACAATGACAGTCCTG...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACAGGACTGTCATTGTTaGGGCCACGGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRQDCHC*GHGSAA
Trigger: TGCTGCAGAACCGTGGCCTCAACAATGACAGTCCTG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTTTTCTAGGCAGTTATTaGATAACGGATCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIFLGSY*ITDLWR
Trigger: CCTCCAAAGATCCGTTATTCAATAACTGCCTAGAAA...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCAGGTACACAACTGGGTaGGAACCACAAGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATRYTTG*EPQGHV
Trigger: AACATGGCCTTGTGGTTCTCACCCAGTTGTGTACCT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTAATTGGCTGCCAGTTTaGAATGAAACCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLINWLPV*NETKKE
Trigger: TTCCTTCTTGGTTTCATTTCAAACTGGCAGCCAATT...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTCTATGGATGGGATGTaGACACACAGTTATATCAGC +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGSMDGM*THSYIS
Trigger: GCTGATATAACTGTGTGTTCACATCCCATCCATAGA...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATTTTGCTTTATGGATCTaGCAAAACTTCGCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNFALWI*QNFAKV
Trigger: GACTTTGGCGAAGTTTTGTCAGATCCATAAAGCAAA...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTCTGGTCTCAAACTCCTaGCCTCATAATCCTAATTAT +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFILVSNS*PHNPNY
Trigger: ATAATTAGGATTATGAGGTCAGGAGTTTGAGACCAG...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTCCTCAACCTGACCTCTaGTTACTGTTTGACATGTTC +
Preference number: 4 (lower is better)
Translates to: HILAFIFISRASCLWWYSPQPDL*LLFDMF
Trigger: GAACATGTCAAACAGTAATCAGAGGTCAGGTTGAGG...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCGAATCCTCACTTATCTaGATGAACCGCATAATCACA +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGESSLI*MNRIIT
Trigger: TGTGATTATGCGGTTCATGCAGATAAGTGAGGATTC...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCCCAGATCTCCCAATTTaGTTTTCCTCTTGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFPDLPI*FSSCFS
Trigger: CGAAAAACAAGAGGAAAAGCAAATTGGGAGATCTGG...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTGTCAAACTTGGCTATTaGTTCTATTGGCTCACATTC +
Preference number: 4 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIVKLGY*FYWLTF
Trigger: GAATGTGAGCCAATAGAAGCAATAGCCAAGTTTGAC...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTCACTGGAGGAGCTCGTaGTACGTCGAATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAHWRSS*YVESEA
Trigger: AGCCTCAGATTCGACGTAGCACGAGCTCCTCCAGTG...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCACCTCCCCTGTGTGCTaGCTCTGTGGCTATAAAGAA +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATTSPVC*LCGYKE
Trigger: TTCTTTATAGCCACAGAGGCAGCACACAGGGGAGGT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGGCCTGTAATGGTACATaGCAAAAATGTACAGTACTA +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWACNGT*QKCTVL
Trigger: TAGTACTGTACATTTTTGGCATGTACCATTACAGGC...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTCAAACACCCTTGCTCTaGCTTTCTAAGATTCTTACA +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIQTPLL*LSKILT
Trigger: TGTAAGAATCTTAGAAAGGCAGAGCAAGGGTGTTTG...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTTCAGTTCCGCCGATTTaGTATTTAGTTAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSISVPPI*YLVSDA
Trigger: TGCATCACTAACTAAATAGCAAATCGGCGGAACTGA...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTCCTCATCTCCTGTGTTaGTCCTTAATTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: HILAFIFISRASCLWWYSPHLLC*SLIVVS
Trigger: AGAGACCACAATTAAGGAGCAACACAGGAGATGAGG...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGTCGAATATGGAAGACTaGATCACCAGATCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGSNMED*ITRSPN
Trigger: ATTGGGAGATCTGGTGATCCAGTCTTCCATATTCGA...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTATATCATGGTTACTCTaGTCATCAGCCAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPISWLL*SSAKGF
Trigger: AAATCCTTTGGCTGATGACCAGAGTAACCATGATAT...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTTTGATCCTGTATTTCTaGGACAGGCATCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFILILYF*DRHQCW
Trigger: CCAACATTGATGCCTGTCCCAGAAATACAGGATCAA...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCGGGAGTTCATGTCCTTaGATGAGGACTTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATGSSCP*MRTCLP
Trigger: CGGAAGACAAGTCCTCATCCAAGGACATGAACTCCC...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGTTAGAAAGGGCATGTaGAGGGTGGAGCGGGCAATG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRVRKGM*RVERAM
Trigger: CATTGCCCGCTCCACCCTCCACATGCCCTTTCTAAC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAAAGAACAGCAGGTTTTaGCCTAAGGGCTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRKNSRF*PKGWRL
Trigger: AAGCCTCCAGCCCTTAGGCCAAAACCTGCTGTTCTT...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAACCACCCGAGTAGCTaGGAGTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRNHPSS*EYRCAP
Trigger: TGGTGCACACCTGTACTCCCAGCTACTCGGGTGGTT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTAATGGAGAGGACAGTTaGGATTTCAAATTTAGGATC +
Preference number: 4 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPNGEDS*DFKFRI
Trigger: GATCCTAAATTTGAAATCCCAACTGTCCTCTCCATT...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACATATTCTTGTGTCAGTaGAGTCAGGTAATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDIFLCQ*SQVIFV
Trigger: TACAAAGATTACCTGACTCCACTGACACAAGAATAT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCATATTCTTGTGTCAGTaGAGTCAGGTAATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAIFLCQ*SQVIFV
Trigger: TACAAAGATTACCTGACTCCACTGACACAAGAATAT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATCATTGCAGTAGATTGTaGGACCCTGCTATAAATTAT +
Preference number: 4 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYHCSRL*DPAINY
Trigger: ATAATTTATAGCAGGGTCCCACAATCTACTGCAATG...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCACAGTAACAATCTTTaGGCTTACAGACCAAAATTC +
Preference number: 4 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYHSNNL*AYRPKF
Trigger: GAATTTTGGTCTGTAAGCCCAAAGATTGTTACTGTG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTGTACTCTGGAAATGTaGGTGTGCACATTAACAAAC +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGCTLEM*VCTLTN
Trigger: GTTTGTTAATGTGCACACCCACATTTCCAGAGTACA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTCCATTCATCCATTCATaGGTTGCTTCTCTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HILAFIFISRASCLWWYSPFIHS*VASLLW
Trigger: CCACAAGAGAGAAGCAACCCATGAATGGATGAATGG...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGGTAGATGAGTACCCTTaGGTATCCATCACAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRVDEYP*VSITRN
Trigger: ATTCCTTGTGATGGATACCCAAGGGTACTCATCTAC...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCAAACCATCCGCTTTCTaGTCCCAAAGCATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSKPSAF*SQSMSS
Trigger: ACTGCTCATGCTTTGGGACCAGAAAGCGGATGGTTT...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp TTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTaGCCTTCATTACAAGTGGTGCAGCATTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: LNLKLCTMWRAV*PSLQVVQHWIF
Trigger: GAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
3UTR CAA 72 bp GTAACAGTCACAAGCAGGAAGCTACCGGTACCGCAATaGATCAAACCGACAGGAAAGGACAATACTGATTTA +
Preference number: 4 (lower is better)
Translates to: VTVTSRKLPVPQ*IKPTGKDNTDL
Trigger: TAAATCAGTATTGTCCTTTCCTGTCGGTTTGATCAATTGCGGTACCGGTAGCTTCCTGCTTGTGACTGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 72 bp TCAGTAAATGATGAATTTAGAGGTAGACACATCCCTTaGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SVNDEFRGRHIP*LQWGSEGVLRG
Trigger: ACCCCTCAACACTCCTTCAGACCCCCACTGTAACAAAGGGATGTGTCTACCTCTAAATTCATCATTTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTTTCTTGTTTTTGCCATaGACCTTTCTGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIFLFLP*TFLLTS
Trigger: AGAAGTTAGCAGAAAGGTTCATGGCAAAAACAAGAA...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTTTCTTGTTTTTGCCATaGACCTTTCTGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIFLFLP*TFLLTS
Trigger: AGAAGTTAGCAGAAAGGTTCATGGCAAAAACAAGAA...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGACTACACTGGCAAACTaGGGTAGAGATCAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKTTLAN*GRDQSN
Trigger: ATTACTTTGATCTCTACCTCAGTTTGCCAGTGTAGT...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGATATAAAGAAGGGCTGTaGACCTTCTCAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRYKEGL*TFSAAV
Trigger: CACTGCAGCTGAGAAGGTTCACAGCCCTTCTTTATA...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTGAGGGAATGAAATGGTaGGAGGCAGTACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPEGMKW*EAVQST
Trigger: CGTGCTCTGTACTGCCTCTCACCATTTCATTCCCTC...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGGCTCTGTTCAGACTTaGATGGTAGCCAAGATCACA +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRGSVQT*MVAKIT
Trigger: TGTGATCTTGGCTACCATGCAAGTCTGAACAGAGCC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAAGTCAGGAGGAGTTTaGGGATGTGAAGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRKSGGV*GCEAPS
Trigger: AGAGGGCGCTTCACATCCGCAAACTCCTCCTGACTT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTAAGTCAGGAGGAGTTTaGGGATGTGAAGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPKSGGV*GCEAPS
Trigger: AGAGGGCGCTTCACATCCGCAAACTCCTCCTGACTT...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTTCCTCCAATGTACCGTaGTCACTGTATGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPSSNVP*SLYGLS
Trigger: CGACAGCCCATACAGTGAGCACGGTACATTGGAGGA...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTACCACATCAGGGGCATaGTTTGCTGTGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLATTSGA*FAVLCL
Trigger: GAGACAGAGCACAGCAAAGCATGCCCCTGATGTGGT...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTACCACATCAGGGGCATaGTTTGCTGTGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPTTSGA*FAVLCL
Trigger: GAGACAGAGCACAGCAAAGCATGCCCCTGATGTGGT...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACACGCCCATTCTGGGTaGCACCATAGGCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRHAHSG*HHRLES
Trigger: ACTTTCAAGCCTATGGTGGCACCCAGAATGGGCGTG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGCTGGTTTTTACATTGTaGATGACTTGTCTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKLVFTL*MTCLLD
Trigger: GTCCAACAGACAAGTCATGCACAATGTAAAAACCAG...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTTCAGCTACCACGCAATaGCATTATCACCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSSATTQ*HYHLSA
Trigger: GGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGA...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCACTGTTCACGATCATTaGAGTAGATTGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSTVHDH*SRLWDP
Trigger: AGGGTCCCACAATCTACTGCAATGATCGTGAACAGT...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACTCCTAGTGTGAATTaGTATAAGGGAGAAAAACCC +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFITPSVN*YKGEKP
Trigger: GGGTTTTTCTCCCTTATAGCAATTCACACTAGGAGT...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTTGTTGGCTATTGACATaGAACGTGTTGAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: HILAFIFISRASCLWWYSCWLLT*NVLRKT
Trigger: CGTTTTCCTCAACACGTTGCATGTCAATAGCCAACA...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTCTCTCACTTCCCTCATaGCATTCCTTCCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPLSLPS*HSFPSS
Trigger: GGAGCTTGGGAAGGAATGGCATGAGGGAAGTGAGAG...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTAGGTGCACGCCACCATaGCCGGCTAATTTTCGTATC +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPRCTPP*PANFRI
Trigger: GATACGAAAATTAGCCGGGCATGGTGGCGTGCACCT...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTATATCATGGTTACTCTaGTCATCAGCCAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIISWLL*SSAKGF
Trigger: AAATCCTTTGGCTGATGACCAGAGTAACCATGATAT...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCATATCATGGTTACTCTaGTCATCAGCCAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFISWLL*SSAKGF
Trigger: AAATCCTTTGGCTGATGACCAGAGTAACCATGATAT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGAGATTCCGTGGAAGTaGCAGGGGTGGGAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHREIPWK*QGWESF
Trigger: AAAACTCTCCCACCCCTGCCACTTCCACGGAATCTC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGATCGTTCCACCGTAGGTaGACACATCAGAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRSFHRR*THQREE
Trigger: CTCCTCTCTCTGATGTGTCCACCTACGGTGGAACGA...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCAAATTATTCTACAGGTaGCTCAAGGGGCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSKLFYR*LKGHQS
Trigger: GCTTTGGTGCCCCTTGAGCCACCTGTAGAATAATTT...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp CACATTCTGGCCTTTATTTTCATCTCCAGGGCTTCTTGCTTATGGTGGTACAGTGTCTCAGGGTTTCTGTaGTGGATAATCGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: HILAFIFISRASCLWWYSVSGFL*WIIENK
Trigger: CTTGTTTTCGATTATCCACCACAGAAACCCTGAGAC...ACTGTACCACCATAAGCAAGAAGCCCTGGAGATGAAAATAAAGGCCAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGTATTCCGTCATAGTTTaGGAAAACAATTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWYSVIV*ENNSFD
Trigger: GTCAAAGGAATTGTTTTCCCAAACTATGACGGAATA...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTTTCGGGAGTGAGAGATaGGGAGGCAGGCGCAATTTT +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAFGSER*GGRRNF
Trigger: AAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAA...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGATTCTAGGTCAAACTTaGGGAATTTTCCTTTTTAGG +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWILGQT*GIFLFR
Trigger: CCTAAAAAGGAAAATTCCCCAAGTTTGACCTAGAAT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGATAAGTCGCCAGAATTaGATCGCAAATATCCTAGAG +
Preference number: 4 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGISRQN*IANILE
Trigger: CTCTAGGATATTTGCGATCCAATTCTGGCGACTTAT...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTTTCTGTTTGGGAAATaGAGGCATGGGTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGFLFGK*RHGLVF
Trigger: AAATACCAACCCATGCCTCCATTTCCCAAACAGAAA...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGTTAACATTTGTAGCATaGAGTCTGGTACTCAATACA +
Preference number: 4 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWLTFVA*SLVLNT
Trigger: TGTATTGAGTACCAGACTCCATGCTACAAATGTTAA...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp TTCCTTCTCTCCTGGCTTATTGGCACAATCATCCACTaGCATTTAGAGGGACATGATTTTTACACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: FLLSWLIGTIIH*HLEGHDFYTRG
Trigger: ACCCCTTGTGTAAAAATCATGTCCCTCTAAATGCAAGTGGATGATTGTGCCAATAAGCCAGGAGAGAAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp GTAGCATGGAGTCTGGTACTCAATACATGTTGGCTATaGACATGCAACGTGTTGAGGAAAACGATGTCAGTA +
Preference number: 4 (lower is better)
Translates to: VAWSLVLNTCWL*TCNVLRKTMSV
Trigger: TACTGACATCGTTTTCCTCAACACGTTGCATGTCAATAGCCAACATGTATTGAGTACCAGACTCCATGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACACTTCATTCTCGATTTTaGGCGTGGCAAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTLHSRF*AWQGGT
Trigger: AGTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAG...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTACTGTGATAGATGATTaGGGAAGGCAAAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSTVIDD*GRQRGT
Trigger: GGTACCTCTTTGCCTTCCTCAATCATCTATCACAGT...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTGCCTGGCAAGACACTTaGTCCTGTATTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPAWQDT*SCISGT
Trigger: TGTCCCAGAAATACAGGATCAAGTGTCTTGCCAGGC...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGTTCATGTCCTTGGATaGGGACTTGTCTTCCGTGAC +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRVHVLG*GLVFRD
Trigger: GTCACGGAAGACAAGTCCTCATCCAAGGACATGAAC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCCAAGACTCTTTTCTCTaGCTACACATTGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATQDSFL*LHIEPP
Trigger: TGGAGGCTCAATGTGTAGTCAGAGAAAAGAGTCTTG...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCAGATAAAAGGCTACTaGAGAGGTGATGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSQIKGY*RGDEPH
Trigger: GTGAGGTTCATCACCTCTTCAGTAGCCTTTTATCTG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAGTGCCACTGGACCACTaGAGATGTTTCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTVPLDH*RCFLLS
Trigger: GGAGAGAAGGAAACATCTTCAGTGGTCCAGTGGCAC...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTATTTTCTGGAGTTTaGTCATTTGAGAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRLFSGV*SFESGH
Trigger: ATGGCCACTCTCAAATGATCAAACTCCAGAAAATAA...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCATATCTTGTATCGTCTaGAAGGTGGCTTCAGTCGTT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSISCIV*KVASVV
Trigger: AACGACTGAAGCCACCTTGCAGACGATACAAGATAT...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACATCCTCCAATGTACCGTaGTCACTGTATGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTSSNVP*SLYGLS
Trigger: CGACAGCCCATACAGTGAGCACGGTACATTGGAGGA...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTGCTCAAATTCCAGTTTaGTTTATGGATCTGACAAAA +
Preference number: 4 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIAQIPV*FMDLTK
Trigger: TTTTGTCAGATCCATAAAGCAAACTGGAATTTGAGC...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCAAGACACCACAGAGATaGACATCAAACTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATKTPQR*TSNWKQ
Trigger: CTGCTTCCAGTTTGATGTGCATCTCTGTGGTGTCTT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGATCTCCTGGATCATGCTaGCATAACTGCCTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRSPGSC*HNCLQD
Trigger: ATCTTGAAGGCAGTTATGGCAGCATGATCCAGGAGA...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGAAGCAGTTAGCACAGTaGTTGGCACATAGAAAATAT +
Preference number: 4 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRKQLAQ*LAHRKY
Trigger: ATATTTTCTATGTGCCAAGCACTGTGCTAACTGCTT...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGGGCACCTAGAAACGTaGTCATACCCTTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRGHLET*SYPFIL
Trigger: CAGGATGAAAGGGTATGAGCACGTTTCTAGGTGCCC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTGGTCAGATAATTTTATaGCTTATTCCCCCTATCACT +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFIGQIIL*LIPPIT
Trigger: AGTGATAGGGGGAATAAGGCATAAAATTATCTGACC...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGCAAGTTTTGTTCAGTaGTCACAACCCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSASFVQ*SQPVLL
Trigger: AAGGAGAACGGGTTGTGACCACTGAACAAAACTTGC...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACACGGGACTGCAACTGTTaGTACCTGAGCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTRDCNC*YLSMSS
Trigger: AGAGCTCATGCTCAGGTACCAACAGTTGCAGTCCCG...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTTTCTCTTGGCGATGCTaGGTTTACTCAGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSFSWRC*VYSGRF
Trigger: AAACCTACCTGAGTAAACCCAGCATCGCCAAGAGAA...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTGGTTGGCTCTTCTCTTaGCGATGCTGGGTTTACTCA +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAGWLFS*RCWVYS
Trigger: TGAGTAAACCCAGCATCGCCAAGAGAAGAGCCAACC...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACACCTTACTGGAGGGGGTaGCTCTCCTCTTTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTPYWRG*LSSFSL
Trigger: CAACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGG...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACATGTCTCTGGGTCCAGTaGCTTGTGGTCATTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTCLWVQ*LVVIEA
Trigger: GGCTTCAATGACCACAAGCCACTGGACCCAGAGACA...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACACTGAGCAATTGTCTCTaGGTCCAGTGGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTLSNCL*VQWLVV
Trigger: GACCACAAGCCACTGGACCCAGAGACAATTGCTCAG...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGATACTCATTGTGTCACTaGAGGAGCTCGTGCTACGTC +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRYSLCH*RSSCYV
Trigger: GACGTAGCACGAGCTCCTCCAGTGACACAATGAGTA...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTAAGAACAGCAGGTTTTaGCCTAAGGGCTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPKNSRF*PKGWRL
Trigger: AAGCCTCCAGCCCTTAGGCCAAAACCTGCTGTTCTT...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGATGTGAGGTACACAACTaGGTGAGAACCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRCEVHN*VRTTRP
Trigger: TGGCCTTGTGGTTCTCACCCAGTTGTGTACCTCACA...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCAGCTCTATTTACGCCTaGGTAGAGACTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATSSIYA*VETSKL
Trigger: CAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTAGAAAGATTTCAATCTaGTGTATGTTTAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIRKISI*CMFRRL
Trigger: AAGCCTCCTAAACATACACCAGATTGAAATCTTTCT...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTAAGATGGGCTTGCCGTaGTTAACTAGAGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSKMGLP*LTRVFL
Trigger: GAGAAAGACTCTAGTTAACCACGGCAAGCCCATCTT...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTGTTTTCAATTCTTTTaGATATGTACCCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGCFQFF*ICTQKW
Trigger: CCACTTCTGGGTACATATCCAAAAGAATTGAAAACA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp TATCCACTGATAACTGTTCACGATCATTGCAGTAGATaGTGGGACCCTGCTATAAATTATTCTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: YPLITVHDHCSR*WDPAINYSTGG
Trigger: GCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCAATGATCGTGAACAGTTATCAGTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 72 bp GCACATGTGTTGATATCCAGCCCAGTCCCATTTCTCTaGCTGAGACTGACCTTGATAGAAAAACTATTTTGT +
Preference number: 4 (lower is better)
Translates to: AHVLISSPVPFL*LRLTLIEKLFC
Trigger: ACAAAATAGTTTTTCTATCAAGGTCAGTCTCAGCAAGAGAAATGGGACTGGGCTGGATATCAACACATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp TGGCACATTTTCTTTACCCATTCATCCATTCATGGGTaGCTTCTCTCTTGTGGCTATTGTGAATTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WHIFFTHSSIHG*LLSCGYCELSC
Trigger: GCAGCTTAATTCACAATAGCCACAAGAGAGAAGCAACCCATGAATGGATGAATGGGTAAAGAAAATGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCAGAACGCCAGCAACTaGGTTAATATCATGGTTACT +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSQNASN*VNIMVT
Trigger: AGTAACCATGATATTAACTCAGTTGCTGGCGTTCTG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCACTACACTGGCAAACTaGGGTAGAGATCAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSTTLAN*GRDQSN
Trigger: ATTACTTTGATCTCTACCTCAGTTTGCCAGTGTAGT...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCGACCAGATAGAAGGCTaGATAAATGAACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATDQIEG*INEQVG
Trigger: TCCTACCTGTTCATTTATTCAGCCTTCTATCTGGTC...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCTCTATGGATGGGATGTaGACACACAGTTATATCAGC +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATSMDGM*THSYIS
Trigger: GCTGATATAACTGTGTGTTCACATCCCATCCATAGA...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGCTAAGAATTTGCATTaGGCCTATCACTCACCTAGT +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSAKNLH*AYHSPS
Trigger: ACTAGGTGAGTGATAGGCTCAATGCAAATTCTTAGC...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTATTTCTTCCAGGCTCTaGACCATTACACATTTGCCA +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSISSRL*TITHLP
Trigger: TGGCAAATGTGTAATGGTTCAGAGCCTGGAAGAAAT...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR TCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAACACACAACGAGCCATaGGGGGAAAGAATGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTTHNEP*GERMKA
Trigger: GGCTTTCATTCTTTCCCCTCATGGCTCGTTGTGTGT...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR TCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAGGGAATAACCTGTCCTaGGTCCTGATGTCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTGNNLS*VLMSCV
Trigger: CACACAAGACATCAGGACTCAGGACAGGTTATTCCC...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTACTCGCATCTCCGTTTaGTGCTCCAGGCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLATRISV*CSRHFC
Trigger: ACAAAAATGCCTGGAGCAGCAAACGGAGATGCGAGT...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCATATCTTGTATCGTCTaGAAGGTGGCTTCAGTCGTT +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATISCIV*KVASVV
Trigger: AACGACTGAAGCCACCTTGCAGACGATACAAGATAT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACATTGAAGCCCGTGTATTaGCCTGATGACGTGGACCTT +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTLKPVY*PDDVDL
Trigger: AAGGTCCACGTCATCAGGGCAATACACGGGCTTCAA...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAGGAGAGTTTTTCACTTaGTCCAGGGTATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTGEFFT*SRVSST
Trigger: GGTGCTGGATACCCTGGAGCAAGTGAAAAACTCTCC...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTGTCAAAAGAGAACACTaGATGAACCAAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPVKREH*MNQGLR
Trigger: CCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTGAC...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGGCTCAAATTCCAGTTTaGTTTATGGATCTGACAAAA +
Preference number: 4 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGAQIPV*FMDLTK
Trigger: TTTTGTCAGATCCATAAAGCAAACTGGAATTTGAGC...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTTCCTGTTTTCCCATGTaGAGTTCCTTCTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLASCFPM*SSFCLG
Trigger: ACCCAAGCAGAAGGAACTGCACATGGGAAAACAGGA...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTATACCAGCAGTTCACTaGAGACAACAGGTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPIPAVH*RQQVLV
Trigger: GACCAGAACCTGTTGTCTCCAGTGAACTGCTGGTAT...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTTCACTCAAGGTTGCATaGTCTTTGCTTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSSLKVA*SLLSLL
Trigger: AAGGAGAGAAAGCAAAGACCATGCAACCTTGAGTGA...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAGGTTGGCTCTTCTCTTaGCGATGCTGGGTTTACTCA +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTGWLFS*RCWVYS
Trigger: TGAGTAAACCCAGCATCGCCAAGAGAAGAGCCAACC...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGATTGGGCCAAAGCAAATaGCCAGGTTATAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRLGQSK*PGYKGP
Trigger: TGGACCCTTATAACCTGGCCATTTGCTTTGGCCCAA...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTTCATCTTCACTTGTGTaGGGCTCTGTACCAGCATCT +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPSSSLV*GSVPAS
Trigger: AGATGCTGGTACAGAGCCCCACACAAGTGAAGATGA...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGGCTATTGCTTCTATTaGCTCACATTCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSGYCFY*LTFIFT
Trigger: AGTGAAGATGAATGTGAGCCAATAGAAGCAATAGCC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACATACTCATTGTGTCACTaGAGGAGCTCGTGCTACGTC +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTYSLCH*RSSCYV
Trigger: GACGTAGCACGAGCTCCTCCAGTGACACAATGAGTA...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGATACAATTTGACTCTTaGAGCACTATATCCACTGAT +
Preference number: 4 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKIQFDS*STISTD
Trigger: ATCAGTGGATATAGTGCTCCAAGAGTCAAATTGTAT...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAGATGCACATCAAACTaGAAGCAGACAAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRRCTSN*KQTKAA
Trigger: GGCTGCCTTTGTCTGCTTCCAGTTTGATGTGCATCT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTTTTGGAAACTTCCAATaGCTTTCCTTGAACTTAGAA +
Preference number: 4 (lower is better)
Translates to: GYIKPEALYNVESGVAFIFGNFQ*LSLNLE
Trigger: TTCTAAGTTCAAGGAAAGCCATTGGAAGTTTCCAAA...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp CTGTTTTCCTTAGTGGCTCTACCATTTTACATTCCCACCAACAGTGCACAAGGGGAGAATAGAGAAATATaGGCACAATCCTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LFSLVALPFYIPTNSAQGENREI*AQSFLF
Trigger: AAACAAGAAGGATTGTGCCCATATTTCTCTATTCTC...CCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTAGAGCCACTAAGGAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCGAATTTCTTTGACTTaGCTTTCATACTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSRISLT*LSYSAM
Trigger: CATAGCCGAGTATGAAAGTCAAGTCAAAGAAATTCG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTCTGTACTGTGATAGATaGTTGAGGAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPLYCDR*LRKAKR
Trigger: CCTCTTTGCCTTCCTCAATCATCTATCACAGTACAG...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAAGGTCACAACCTTTCTaGCTCAGCTGGGCTACATTA +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTRSQPF*LSWATL
Trigger: TAATGTAGCCCAGCTGAGTCAGAAAGGTTGTGACCT...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTTGCATTATAGGAAGATaGCATTTCCTGGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPCIIGR*HFLASL
Trigger: AAGGGAGGCCAGGAAATGTCATCTTCCTATAATGCA...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGATGTTGTACGAAGATGTaGAAAGCTGTTGAATGGTGT +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRCCTKM*KAVEWC
Trigger: ACACCATTCAACAGCTTTGCACATCTTCGTACAACA...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTACTGTTCACGATCATTaGAGTAGATTGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPTVHDH*SRLWDP
Trigger: AGGGTCCCACAATCTACTGCAATGATCGTGAACAGT...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACACTCAAACTTCATTGGTaGACAGAACGCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTLKLHW*TERSRV
Trigger: TACCCTGCTGCGTTCTGTCCACCAATGAAGTTTGAG...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACATCATCTTCACTTGTGTaGGGCTCTGTACCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTSSSLV*GSVPAS
Trigger: AGATGCTGGTACAGAGCCCCACACAAGTGAAGATGA...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTTGCCTTCATTACAAGTaGTGCAGCATTGGATTTTCA +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSCLHYK*CSIGFS
Trigger: TGAAAATCCAATGCTGCACCACTTGTAATGAAGGCA...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAAAGCTCTGTACAATGTaGAGAGCGGTGTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTKLCTM*RAVLPS
Trigger: TGAAGGCAACACCGCTCTCCACATTGTACAGAGCTT...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGACGATGCATTCACCAATaGGCTGATGAAGTAAAATCT +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRRCIHQ*ADEVKS
Trigger: AGATTTTACTTCATCAGCCCATTGGTGAATGCATCG...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCAGTGAGTTCTATGGATaGGATGTGAACACACAGTTA +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATSEFYG*DVNTQL
Trigger: TAACTGTGTGTTCACATCCCATCCATAGAACTCACT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTTCTCTCCTGGCTTATTaGCACAATCATCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLASLLAY*HNHPLA
Trigger: TGCAAGTGGATGATTGTGCCAATAAGCCAGGAGAGA...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp AAAGAAAGATTTCAATCTGGTGTATGTTTAGGAGGCTaGTACACTCTCAGCTTCTCAGTTAAGTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: KERFQSGVCLGG*YTLSFSVKCLP
Trigger: TGGCAGACACTTAACTGAGAAGCTGAGAGTGTACAAGCCTCCTAAACATACACCAGATTGAAATCTTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCTTCTTGTTTTTGCCATaGACCTTTCTGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATFLFLP*TFLLTS
Trigger: AGAAGTTAGCAGAAAGGTTCATGGCAAAAACAAGAA...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR TCA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGTTGGCTCAGAGTGTCTaGAAACGTATCATCCATATC +
Preference number: 4 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLLAQSV*KRIIHI
Trigger: GATATGGATGATACGTTTTCAGACACTCTGAGCCAA...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTCATCACACTACACACTaGACTTGGATGAATGCTCTA +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAHHTTH*TWMNAL
Trigger: TAGAGCATTCATCCAAGTTCAGTGTGTAGTGTGATG...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTATCCACACCAAGTTGTaGTGTGAAGGAGAAATTCAG +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAIHTKL*CEGEIQ
Trigger: CTGAATTTCTCCTTCACATCACAACTTGGTGTGGAT...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAATTGAATGTTTAGCTTaGAGTTATCGGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTIECLA*SYRPQD
Trigger: GTCCTGGGGCCGATAACTTCAAGCTAAACATTCAAT...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTACATCTCCAAAATCCTaGGGGGAAATGATTCATAAT +
Preference number: 4 (lower is better)
Translates to: GVAFITSGAALDFQVSLSTSPKS*GEMIHN
Trigger: ATTATGAATCATTTCCCCTCAGGATTTTGGAGATGT...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR GCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAGGTTGCATGGTCTTTaGTTTCTCTCCTTACTTGGT +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRRLHGL*FLSLLG
Trigger: ACCAAGTAAGGAGAGAAAGCAAAGACCATGCAACCT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAAAATGGCCTCTCACTaGTATGGTCAGGAATCAATG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRKMASH*YGQESM
Trigger: CATTGATTCCTGACCATAGCAGTGAGAGGCCATTTT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR GCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGATTTGTTTTTAATAGATaGAGTCCATCAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRFVFNR*SPSKAQ
Trigger: CTGGGCCTTTGATGGACTGCATCTATTAAAAACAAA...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAAACTGAGGCATTGGTaGCTTCAAGTGTTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRKLRHW*LQVLGD
Trigger: ATCTCCTAACACTTGAAGCCACCAATGCCTCAGTTT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTTTGATCCTGTATTTCTaGGACAGGCATCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPLILYF*DRHQCW
Trigger: CCAACATTGATGCCTGTCCCAGAAATACAGGATCAA...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGACAACATAGTCAAACTTaGCTATTGCTTCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: IDKMLIGLQVISAAASRRQHSQT*LLLLLA
Trigger: AGCCAATAGAAGCAATAGCCAAGTTTGACTATGTTG...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAAAATTATTCTACAGGTaGCTCAAGGGGCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTKLFYR*LKGHQS
Trigger: GCTTTGGTGCCCCTTGAGCCACCTGTAGAATAATTT...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 72 bp ACGTATACTAGGGTAAGTGAAAGCTCAAATTCCAGTTaGCTTTATGGATCTGACAAAACTTCGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TYTRVSESSNSS*LYGSDKTSPKS
Trigger: TGACTTTGGCGAAGTTTTGTCAGATCCATAAAGCAAACTGGAATTTGAGCTTTCACTTACCCTAGTATACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 72 bp GTACTCAATACATGTTGGCTATTGACATGCAACGTGTaGAGGAAAACGATGTCAGTACATGGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: VLNTCWLLTCNV*RKTMSVHGTFS
Trigger: TGAAAATGTACCATGTACTGACATCGTTTTCCTCAACACGTTGCATGTCAATAGCCAACATGTATTGAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTCATGAATATAGTACTTaGAAACTGAGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPHEYST*KLRHWW
Trigger: CCACCAATGCCTCAGTTTTCAAGTACTATATTCATG...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR TCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGATTTCTAGGCAGTTATTaGATAACGGATCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRFLGSY*ITDLWR
Trigger: CCTCCAAAGATCCGTTATTCAATAACTGCCTAGAAA...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAGATGTCACTCAAGGTTaGATGGTCTTTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTDVTQG*MVFAFS
Trigger: AGAGAAAGCAAAGACCATGCAACCTTGAGTGACATC...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR GCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACTGGTTTTTACATTGTaGATGACTTGTCTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRLVFTL*MTCLLD
Trigger: GTCCAACAGACAAGTCATGCACAATGTAAAAACCAG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACATCCTCTAGTCGAATATaGAAGACTGGATCACCAGAT +
Preference number: 4 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTSSSRI*KTGSPD
Trigger: ATCTGGTGATCCAGTCTTCCATATTCGACTAGAGGA...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTTGCCTTCATTACAAGTaGTGCAGCATTGGATTTTCA +
Preference number: 4 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPCLHYK*CSIGFS
Trigger: TGAAAATCCAATGCTGCACCACTTGTAATGAAGGCA...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CCA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTGGGCTATATGGCCTGTaGATAGAATTTACCATCATT +
Preference number: 4 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAGLYGL*IEFTII
Trigger: AATGATGGTAAATTCTATCCACAGGCCATATAGCCC...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAATGGAGGCATGGGTTaGTATTTGTTGAAGTCTAGT +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRNGGMG*YLLKSS
Trigger: ACTAGACTTCAACAAATACCAACCCATGCCTCCATT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp CCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTaGGCTATTATGGATAATACTGCTATGACAATCTGT +
Preference number: 4 (lower is better)
Translates to: PSVDGHLHCFYH*AIMDNTAMTIC
Trigger: ACAGATTGTCATAGCAGTATTATCCATAATAGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAACTGGTAAAGAAACATaGCCATGTTTTATACTCGTG +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRTGKET*PCFILV
Trigger: CACGAGTATAAAACATGGTCATGTTTCTTTACCAGT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR TCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGATTGAGAAATCTATGGTaGTGGAAACTAAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRLRNLW*WKLKPS
Trigger: ACTTGGCTTTAGTTTCCATCACCATAGATTTCTCAA...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CCA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACATTGCAGTAGATTGTaGGACCCTGCTATAAATTAT +
Preference number: 4 (lower is better)
Translates to: TNARVNLASLRHYIRQHRHCSRL*DPAINY
Trigger: ATAATTTATAGCAGGGTCCCACAATCTACTGCAATG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
3UTR CAA 72 bp CAATATACCACATTTGCTTATTCATTTGTCCCTCTGTaGATGGACATTTGCATTGCTTCTATCATTTGGCTA +
Preference number: 4 (lower is better)
Translates to: QYTTFAYSFVPL*MDICIASIIWL
Trigger: TAGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCAAATGTGGTATATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
3UTR CAA 72 bp AGTGTGTCAGCTCGTGAGAACTGTTACACTAATGATTaGCACACTTTTGTTAGTATTCTGCACTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: SVSARENCYTND*HTFVSILHFNK
Trigger: TTTATTAAAGTGCAGAATACTAACAAAAGTGTGCAAATCATTAGTGTAACAGTTCTCACGAGCTGACACACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS TCA 90 bp GGCTGCCATGGCCAGGCCTGCGCCTCCGCTCAGGACTGTCATTGTTaGGGCCACGGTTCTGCAGCAGGCCCCGGGGGTGACTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: GCHGQACASAQDCHC*GHGSAAGPGGDWQG
Trigger: GCCTTGCCAGTCACCCCCGGGGCCTGCTGCAGAACCGTGGCCTCAACAATGACAGTCCTGAGCGGAGGCGCAGGCCTGGCCATGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CCA 90 bp ATCACACCGGGCAGTACTGCAAGGCTGAGGTGCAGTGGCTCCTCATaGCCCCAGGAGGAGCGGAGGCTTAGGGGCCTGATTCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ITPGSTARLRCSGSS*PQEERRLRGLIPRL
Trigger: GAGCCTGGGAATCAGGCCCCTAAGCCTCCGCTCCTCCTGGGGCCATGAGGAGCCACTGCACCTCAGCCTTGCAGTACTGCCCGGTGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542841.1
CDS CCA 90 bp ATCTTCTTGAGGGAGTCGTGCCGGCTGATGTTGGTCAGGCTGCCATaGCCAGGCCTGCGCCTCCGCTCAGGACTGTCATTGTTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: IFLRESCRLMLVRLP*PGLRLRSGLSLLRP
Trigger: TGGCCTCAACAATGACAGTCCTGAGCGGAGGCGCAGGCCTGGCCATGGCAGCCTGACCAACATCAGCCGGCACGACTCCCTCAAGAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS GCA 90 bp AAAGGGCATGTGGAGGGTGGAGCGGGCAATGGCCATCACTGGTCCTaGCAGGACGCCTTACTGGAGGGGGTGGCTCTCCTCTTTTTCGTT +
Preference number: 5 (lower is better)
Translates to: KGHVEGGAGNGHHWS*QDALLEGVALLFFV
Trigger: AACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCCCGCTCCACCCTCCACATGCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CCA 90 bp GGGGACCCTAGGTCAACTGAGGAGTTAGAAAGGGCATGTGGAGGGTaGAGCGGGCAATGGCCATCACTGGTCCTGCCAGGACGCCTTACT +
Preference number: 5 (lower is better)
Translates to: GDPRSTEELERACGG*SGQWPSLVLPGRLT
Trigger: AGTAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCCCGCTCCACCCTCCACATGCCCTTTCTAACTCCTCAGTTGACCTAGGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCCAGCCCAGCTGGAGCTaGTGTTCTCAACTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGQPSWS*CSQLGR
Trigger: CCTCCCAAGTTGAGAACACAAGCTCCAGCTGGGCTG...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGTGGGCTTCCCAGGGCTaGGTTATGTGCTCTGTACCT +
Preference number: 5 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRWASQG*VMCSVP
Trigger: AGGTACAGAGCACATAACCAAGCCCTGGGAAGCCCA...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 90 bp GTGGAGCGGGCAATGGCCATCACTGGTCCTGCCAGGACGCCTTACTaGAGGGGGTGGCTCTCCTCTTTTTCGTTGCCTAGACATTCACAG +
Preference number: 5 (lower is better)
Translates to: VERAMAITGPARTPY*RGWLSSFSLPRHSQ
Trigger: CTGTGAATGTCTAGGCAACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCCCGCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542841.1
CDS-3UTR CAA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGGGACAGGCATCAATGTaGGGCCAAAGCAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRGQASM*GQSKWP
Trigger: TGGCCATTTGCTTTGGCCCAACATTGATGCCTGTCC...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGAGGGAGGCACCCTTCTaGAAGGATAGTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRREAPF*KDSSLA
Trigger: TGCCAGAGAACTATCCTTCAAGAAGGGTGCCTCCCT...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGCACATTCATCTTCACTaGTGTGGGGCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRHIHLH*CGALYQ
Trigger: CTGGTACAGAGCCCCACACAAGTGAAGATGAATGTG...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGGCTGTCGATCTTCTaGAGGGAGTCGTGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGLSIF*RESCRL
Trigger: CAGCCGGCACGACTCCCTCAAGAAGATCGACAGCCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGTTCAATGGGCAAGTTTaGTTCAGTGGTCACAACCCG +
Preference number: 5 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRFNGQV*FSGHNP
Trigger: CGGGTTGTGACCACTGAACAAAACTTGCCCATTGAA...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCTGCCTGGCAAGACACTaGATCCTGTATTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGCLARH*ILYFWD
Trigger: GTCCCAGAAATACAGGATCAAGTGTCTTGCCAGGCA...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACGGTGACTGGCAAGGCTaGGGGACCCTAGGTCAACTG +
Preference number: 5 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDGDWQG*GTLGQL
Trigger: CAGTTGACCTAGGGTCCCCAAGCCTTGCCAGTCACC...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGGGTCTGAAGGAGTGTaGAGGGGTGGGAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: STPDRQLLGVKDPSISRQGSEGV*RGGKAT
Trigger: GGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 90 bp GCAATGGCCATCACTGGTCCTGCCAGGACGCCTTACTGGAGGGGGTaGCTCTCCTCTTTTTCGTTGCCTAGACATTCACAGAAACAGGGA +
Preference number: 5 (lower is better)
Translates to: AMAITGPARTPYWRG*LSSFSLPRHSQKQG
Trigger: TCCCTGTTTCTGTGAATGTCTAGGCAACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542841.1
CDS-3UTR CAA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCGCTCAGGACTGTCATaGTTGAGGCCACGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDRSGLS*LRPRFC
Trigger: GCAGAACCGTGGCCTCAACAATGACAGTCCTGAGCG...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGTACATTGTGCATGACTaGTCTGTTGGACCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRYIVHD*SVGPWG
Trigger: TCCCCAGGGTCCAACAGACAAGTCATGCACAATGTA...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGACAATTGCAAGTCTTTaGCATGAGCTAAACCCCGCT +
Preference number: 5 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRTIASL*HELNPA
Trigger: AGCGGGGTTTAGCTCATGCAAAAGACTTGCAATTGT...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATCCCGGGAGATGGAGGTaGCAGGGAGCCGAGATTGCA +
Preference number: 5 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYPGRWR*QGAEIA
Trigger: TGCAATCTCGGCTCCCTGCAACCTCCATCTCCCGGG...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGAGCATCATCCCAAATTaGAATCCTCTAACCCCCGCC +
Preference number: 5 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRSIIPN*NPLTPA
Trigger: GGCGGGGGTTAGAGGATTCAAATTTGGGATGATGCT...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS TCA 90 bp AAAGTACTCATTGTGTCACTGGAGGAGCTCGTGCTACGTCGAATCTaGGGCTCGGAGCTCCTGAGGGCAACGTTGTGCAAAGGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: KVLIVSLEELVLRRI*GSELLRATLCKGLR
Trigger: TCTCAGCCCTTTGCACAACGTTGCCCTCAGGAGCTCCGAGCCTCAGATTCGACGTAGCACGAGCTCCTCCAGTGACACAATGAGTACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS TCA 90 bp GGGGCAGTGTTTCCAGACTTTTCTACGATCAGGAGCACCACACTCTaGAGATCCCTCCCTAGGAGCTCGGTATTGACTTTCCAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GAVFPDFSTIRSTTL*RSLPRSSVLTFQPS
Trigger: GGAGGGCTGGAAAGTCAATACCGAGCTCCTAGGGAGGGATCTTCAGAGTGTGGTGCTCCTGATCGTAGAAAAGTCTGGAAACACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537556.1
CDS CCA 90 bp GGCAGGTCCTATGGTAGGATTTGTTTTTGGAAGAACAGCAGGTTTTaGCCTAAGGGCTGGAGGCTTCAGCTGCACGCCCATTCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: GRSYGRICFWKNSRF*PKGWRLQLHAHSGC
Trigger: GCACCCAGAATGGGCGTGCAGCTGAAGCCTCCAGCCCTTAGGCCAAAACCTGCTGTTCTTCCAAAAACAAATCCTACCATAGGACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGTCCTTGGATGAGGACTaGTCTTCCGTGACTGGCCCA +
Preference number: 5 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLSLDED*SSVTGP
Trigger: TGGGCCAGTCACGGAAGACAAGTCCTCATCCAAGGA...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGGCCTCAGGTGCTTCTaGCTGCCTTCATTTCCACAG +
Preference number: 5 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWGLRCF*LPSFPQ
Trigger: CTGTGGAAATGAAGGCAGCAAGAAGCACCTGAGGCC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGTGTGAAGTGGCCACCTaGTCTTATCTCTGGAATCTG +
Preference number: 5 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRCEVAT*SYLWNL
Trigger: CAGATTCCAGAGATAAGACAAGGTGGCCACTTCACA...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTGCTTGTGTTCTCAACTaGGGAGGTGGGTGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GVDTEREHGALQSATQQVACVLN*GGGWQV
Trigger: CACCTGCCACCCACCTCCCAAGTTGAGAACACAAGC...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCAGGCAGCGGAACAGATaGGAGGATGTAGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSARQRNR*EDVEGL
Trigger: CAGCCCCTCTACATCCTCCAATCTGTTCCGCTGCCT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGAAGCTACGGCAATCGTaGTGGCAAGGGGAATGGTGC +
Preference number: 5 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWKLRQS*WQGEWC
Trigger: GCACCATTCCCCTTGCCACAACGATTGCCGTAGCTT...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTTGCCGTGGCGTGACCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: SSVQCGERCCLHYKWCSICRGVT*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGGTCACGCCACGGCA...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGTGGGCACAATCCTTCTaGTTTGTCGATCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRWAQSF*FVDLSL
Trigger: CAAGGAGAGATCGACAAACAAGAAGGATTGTGCCCA...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS GCA 90 bp TTCTTAACCTCTTCATTCTCGATTTTGAGCGTGGCAAGGCGGGACTaGAACTGTTGGTACCTGAGCATGAGCTCTGCCTGGACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FLTSSFSILSVARRD*NCWYLSMSSAWTGC
Trigger: GCAGCCAGTCCAGGCAGAGCTCATGCTCAGGTACCAACAGTTGCAGTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAGAGGTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS CCA 90 bp CGGCTCGGGGTGGACATTATCCAGCTGTTCCGGGTTTGCTTTCAATaGGCAAGTTTTGTTCAGTGGTCACAACCCGTTCTCCTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: RLGVDIIQLFRVCFQ*ASFVQWSQPVLLGE
Trigger: CTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGATAATGTCCACCCCGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 90 bp GGCTCACATTCATCTTCACTTGTGTGGGGCTCTGTACCAGCATCTTaGTCCACTTCCTCCAATGTACCGTGCTCACTGTATGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: GSHSSSLVWGSVPAS*STSSNVPCSLYGLS
Trigger: CGACAGCCCATACAGTGAGCACGGTACATTGGAGGAAGTGGACCAAGATGCTGGTACAGAGCCCCACACAAGTGAAGATGAATGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CCA 90 bp GGTAGGATTTGTTTTTGGAAGAACAGCAGGTTTTGGCCTAAGGGCTaGAGGCTTCAGCTGCACGCCCATTCTGGGTGCCACCATAGGCTT +
Preference number: 5 (lower is better)
Translates to: GRICFWKNSRFWPKG*RLQLHAHSGCHHRL
Trigger: AAGCCTATGGTGGCACCCAGAATGGGCGTGCAGCTGAAGCCTCCAGCCCTTAGGCCAAAACCTGCTGTTCTTCCAAAAACAAATCCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CCA 90 bp GAGAGCATACCATCTTCACTTGTGTGGGGCTCTGTACCAGCATCTTaGTCCACTTCCTCCAATGTACCGTGCTCACTGTATGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: ESIPSSLVWGSVPAS*STSSNVPCSLYGLS
Trigger: CGACAGCCCATACAGTGAGCACGGTACATTGGAGGAAGTGGACCAAGATGCTGGTACAGAGCCCCACACAAGTGAAGATGGTATGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537585.1
CDS-3UTR CAA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATCACAACCCGTTCTCCTaGGAGAGGCAGAGTTGTACT +
Preference number: 5 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDHNPFS*ERQSCT
Trigger: AGTACAACTCTGCCTCTCCAAGGAGAACGGGTTGTG...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTGCGGGACTGCAACTGTaGGTACCTGAGCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPAGLQL*VPEHEL
Trigger: GAGCTCATGCTCAGGTACCAACAGTTGCAGTCCCGC...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGCGGGACTGCAACTGTaGGTACCTGAGCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYAGLQL*VPEHEL
Trigger: GAGCTCATGCTCAGGTACCAACAGTTGCAGTCCCGC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGAGGGAGGCACCCTTCTaGAAGGATAGTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWREAPF*KDSSLA
Trigger: TGCCAGAGAACTATCCTTCAAGAAGGGTGCCTCCCT...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGTGACTGGCAAGGCTaGGGGACCCTAGGTCAACTG +
Preference number: 5 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIGDWQG*GTLGQL
Trigger: CAGTTGACCTAGGGTCCCCAAGCCTTGCCAGTCACC...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTCTGGGTCCAGTGGCTaGTGGTCATTGAAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPSGSSG*WSLKPV
Trigger: CACGGGCTTCAATGACCACAAGCCACTGGACCCAGA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGGGGAGAGTTTTTCACTaGCTCCAGGGTATCCAGCAC +
Preference number: 5 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQGRVFH*LQGIQH
Trigger: GTGCTGGATACCCTGGAGCAAGTGAAAAACTCTCCC...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGGGGAGAGTTTTTCACTaGCTCCAGGGTATCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWGRVFH*LQGIQH
Trigger: GTGCTGGATACCCTGGAGCAAGTGAAAAACTCTCCC...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGCCCGGGAGATGGAGGTaGCAGGGAGCCGAGATTGCA +
Preference number: 5 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRPGRWR*QGAEIA
Trigger: TGCAATCTCGGCTCCCTGCAACCTCCATCTCCCGGG...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCGATCATTGCAGTAGATaGTGGGACCCTGCTATAAAT +
Preference number: 5 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGDHCSR*WDPAIN
Trigger: ATTTATAGCAGGGTCCCACAATCTACTGCAATGATC...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGGCTTGTGTTCTCAACTaGGGAGGTGGGTGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWACVLN*GGGWQV
Trigger: CACCTGCCACCCACCTCCCAAGTTGAGAACACAAGC...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCAGCCCAGCTGGAGCTaGTGTTCTCAACTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYQPSWS*CSQLGR
Trigger: CCTCCCAAGTTGAGAACACAAGCTCCAGCTGGGCTG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGACTGAACAAGGCATGTaGTTTCAGCACTGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLTEQGM*FQHCGR
Trigger: CCTCCCGCAGTGCTGAAACAACATGCCTTGTTCAGT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GAGCACGGGCGAATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGATTATAGCACAATTCTaGAGCACTAACTATGCACCA +
Preference number: 5 (lower is better)
Translates to: EHGRMRCCQQHMSGGLMRIIAQF*STNYAP
Trigger: TGGTGCATAGTTAGTGCTCAAGAATTGTGCTATAAT...CCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCATTCGCCCGTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 90 bp CTTTCAATGGGCAAGTTTTGTTCAGTGGTCACAACCCGTTCTCCTTaGAGAGGCAGAGTTGTACTCCCACACGCAGGCAATCCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LSMGKFCSVVTTRSP*RGRVVLPHAGNPEA
Trigger: TGCCTCTGGATTGCCTGCGTGTGGGAGTACAACTCTGCCTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TCTGGTTCGGGAGTGAGAGATGGGGAGGCAGGCGCAATTTTCTCAACAGGAGATGATGGTGACCATATCTaGTATCGTCTGCAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SGSGVRDGEAGAIFSTGDDGDHI*YRLQGG
Trigger: GCCACCTTGCAGACGATACAAGATATGGTCACCATC...ATCTCCTGTTGAGAAAATTGCGCCTGCCTCCCCATCTCTCACTCCCGAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGGATGGTGACCATATCTaGTATCGTCTGCAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQDGDHI*YRLQGG
Trigger: GCCACCTTGCAGACGATACAAGATATGGTCACCATC...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGCGATGCTGTCAGCAGCACATGAGCGGGGGACTGATGCGGTGGGATGGGAGGCAAGTCATGTTTGGCTaGAAGTTTTGTGATGAGATT +
Preference number: 5 (lower is better)
Translates to: MRCCQQHMSGGLMRWDGRQVMFG*KFCDEI
Trigger: AATCTCATCACAAAACTTCAAGCCAAACATGACTTG...CCTCCCATCCCACCGCATCAGTCCCCCGCTCATGTGCTGCTGACAGCATCGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCACCTGTCCTGAGTCCTaGACGAATGTTTCCAAATCC +
Preference number: 5 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLTCPES*TNVSKS
Trigger: GGATTTGGAAACATTCGTCAAGGACTCAGGACAGGT...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGGGACAGGCATCAATGTaGGGCCAAAGCAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWGQASM*GQSKWP
Trigger: TGGCCATTTGCTTTGGCCCAACATTGATGCCTGTCC...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGCACATTCATCTTCACTaGTGTGGGGCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWHIHLH*CGALYQ
Trigger: CTGGTACAGAGCCCCACACAAGTGAAGATGAATGTG...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGTGGCTATTGCTTCTATaGGCTCACATTCATCTTCAC +
Preference number: 5 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRWLLLL*AHIHLH
Trigger: GTGAAGATGAATGTGAGCCAATAGAAGCAATAGCCA...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGTCAGGACTGTCATTGTaGAGGCCACGGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWSGLSL*RPRFCS
Trigger: GCTGCAGAACCGTGGCCTCAACAATGACAGTCCTGA...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGAACCGAAGGTGCTCATaGTCAGCTACCACGCAATGC +
Preference number: 5 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWNRRCS*SATTQC
Trigger: GCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTT...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACAACCGAAGGTGCTCATaGTCAGCTACCACGCAATGC +
Preference number: 5 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDNRRCS*SATTQC
Trigger: GCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGGCCTCAGGTGCTTCTaGCTGCCTTCATTTCCACAG +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYGLRCF*LPSFPQ
Trigger: CTGTGGAAATGAAGGCAGCAAGAAGCACCTGAGGCC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGATTCAAAGCTCAGTCTaGGCTGGATCTCCACGGTGT +
Preference number: 5 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWIQSSV*AGSPRC
Trigger: ACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGACACCTCTGGCCCTTaGATGCCCTCTGTTAACATC +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSDTSGP*MPSVNI
Trigger: GATGTTAACAGAGGGCATCAAAGGGCCAGAGGTGTC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGAGCATCATCCCAAATTaGAATCCTCTAACCCCCGCC +
Preference number: 5 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQSIIPN*NPLTPA
Trigger: GGCGGGGGTTAGAGGATTCAAATTTGGGATGATGCT...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TTGTTACAGTGGGGGTCTGAAGGAGTGTTGAGGGGTGGGAAAGCCACCTCACTCAAACCAAAGATGGGCTaGCCGTGGTTAACTAGAGTC +
Preference number: 5 (lower is better)
Translates to: LLQWGSEGVLRGGKATSLKPKMG*PWLTRV
Trigger: GACTCTAGTTAACCACGGCAAGCCCATCTTTGGTTT...GAGTGAGGTGGCTTTCCCACCCCTCAACACTCCTTCAGACCCCCACTGTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 90 bp ATCCAGCTGTTCCGGGTTTGCTTTCAATGGGCAAGTTTTGTTCAGTaGTCACAACCCGTTCTCCTTGGAGAGGCAGAGTTGTACTCCCAC +
Preference number: 5 (lower is better)
Translates to: IQLFRVCFQWASFVQ*SQPVLLGEAELYSH
Trigger: GTGGGAGTACAACTCTGCCTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTCTTGGAGAGGCAGAGTaGTACTCCCACACGCAGGCA +
Preference number: 5 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGLGEAE*YSHTQA
Trigger: TGCCTGCGTGTGGGAGTACAACTCTGCCTCTCCAAG...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTGCGGGACTGCAACTGTaGGTACCTGAGCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFIAGLQL*VPEHEL
Trigger: GAGCTCATGCTCAGGTACCAACAGTTGCAGTCCCGC...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATTCTTCATTCTCGATTTaGAGCGTGGCAAGGCGGGAC +
Preference number: 5 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYSSFSI*SVARRD
Trigger: GTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAGA...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTCTTCATTCTCGATTTaGAGCGTGGCAAGGCGGGAC +
Preference number: 5 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPSSFSI*SVARRD
Trigger: GTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAGA...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACACATTCATCTTCACTaGTGTGGGGCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSHIHLH*CGALYQ
Trigger: CTGGTACAGAGCCCCACACAAGTGAAGATGAATGTG...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGGGGAGTTCATGTCCTaGGATGAGGACTTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYGEFMS*DEDLSS
Trigger: GGAAGACAAGTCCTCATCCAAGGACATGAACTCCCC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTCAGGACTGTCATTGTaGAGGCCACGGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGSGLSL*RPRFCS
Trigger: GCTGCAGAACCGTGGCCTCAACAATGACAGTCCTGA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTTCTGGGTCCAGTGGCTaGTGGTCATTGAAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFISGSSG*WSLKPV
Trigger: CACGGGCTTCAATGACCACAAGCCACTGGACCCAGA...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACCAATATCCTGAGCAATaGTCTCTGGGTCCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDQYPEQ*SLGPVA
Trigger: AGCCACTGGACCCAGAGACAATTGCTCAGGATATTG...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATGGGAGAGTTTTTCACTaGCTCCAGGGTATCCAGCAC +
Preference number: 5 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYGRVFH*LQGIQH
Trigger: GTGCTGGATACCCTGGAGCAAGTGAAAAACTCTCCC...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACTACATTGTGCATGACTaGTCTGTTGGACCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDYIVHD*SVGPWG
Trigger: TCCCCAGGGTCCAACAGACAAGTCATGCACAATGTA...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGATAAGCTCCTTGAAATaGGGGGCAGAACACCTCAAG +
Preference number: 5 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKISSLK*GAEHLK
Trigger: CTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTAT...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GCTGATGGCCCTGCATGGCTCTTACTCAGGTACCAGGGCCAGTTCAGGGTTGGCAGCTCAAATTCCAGTTaGCTTTATGGATCTGACAAA +
Preference number: 5 (lower is better)
Translates to: ADGPAWLLLRYQGQFRVGSSNSS*LYGSDK
Trigger: TTTGTCAGATCCATAAAGCAAACTGGAATTTGAGCT...GCCAACCCTGAACTGGCCCTGGTACCTGAGTAAGAGCCATGCAGGGCCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGAAAGTATCCTTGCCTTaGAGTAGGCCTTCCGGTCAA +
Preference number: 5 (lower is better)
Translates to: STPDRQLLGVKDPSISRQKVSLP*SRPSGQ
Trigger: TTGACCGGAAGGCCTACTCAAAGGCAAGGATACTTT...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGCCTGATAGACAGCTGTaGGGTGTGAAGGATCCATCC +
Preference number: 5 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWPDRQL*GVKDPS
Trigger: GGATGGATCCTTCACACCCAACAGCTGTCTATCAGG...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCGGTAGACACATCCCTTaGTTACAGTGGGGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAGRHIP*LQWGSE
Trigger: TTCAGACCCCCACTGTAACAAAGGGATGTGTCTACC...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCAGGGGAAGAGACTGCTaGGAAAGCTTGAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLRGRDC*ESLNPL
Trigger: GAGAGGATTCAAGCTTTCCAAGCAGTCTCTTCCCCT...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTGAGTCCTGATGTCTaGTGTGCGAGTTTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWLSPDV*CASFFV
Trigger: GACGAAGAAACTCGCACACAAGACATCAGGACTCAG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543397.1
ENST00000631006.2
CDS GCA 90 bp TTCTTGAATCGGCTCGGGGTGGACATTATCCAGCTGTTCCGGGTTTaGTTTCAATGGGCAAGTTTTGTTCAGTGGTCACAACCCGTTCTC +
Preference number: 5 (lower is better)
Translates to: FLNRLGVDIIQLFRV*FQWASFVQWSQPVL
Trigger: GAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGATAATGTCCACCCCGAGCCGATTCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCATCGGCTATGATCTCTTaGTCCTTCTTGAATCGGCTC +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSSAMIS*SFLNRL
Trigger: GAGCCGATTCAAGAAGGACAAAGAGATCATAGCCGA...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACTGCTCCAGGCATTTTaGTTGTTCTACCAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSLLQAF*LFYQLS
Trigger: GCTCAACTGGTAGAACAACAAAAATGCCTGGAGCAG...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGTTTTCGGAAGAAATCTaGCAGATCCTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQFSEEI*QILEKL
Trigger: CAGCTTCTCCAGGATCTGCAAGATTTCTTCCGAAAA...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTGGAGGTTTCAAGGTaGTACTCCGCAGACAGATAT +
Preference number: 5 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWLEVSR*YSADRY
Trigger: ATATCTGTCTGCGGAGTACAACCTTGAAACCTCCAG...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTTCAGGACTGTCATTGTaGAGGCCACGGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFISGLSL*RPRFCS
Trigger: GCTGCAGAACCGTGGCCTCAACAATGACAGTCCTGA...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGGGCTGTCGATCTTCTaGAGGGAGTCGTGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: IDKMLIGLQVISAAASRRGLSIF*RESCRL
Trigger: CAGCCGGCACGACTCCCTCAAGAAGATCGACAGCCC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACAATATCCTGAGCAATaGTCTCTGGGTCCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRQYPEQ*SLGPVA
Trigger: AGCCACTGGACCCAGAGACAATTGCTCAGGATATTG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGGTGCCACCATAGGCTaGAAAGTACTCATTGTGTCA +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSGATIG*KVLIVS
Trigger: TGACACAATGAGTACTTTCAAGCCTATGGTGGCACC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTATGTGGAGAGCGGTGTaGCCTTCATTACAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPMWRAV*PSLQVV
Trigger: CACCACTTGTAATGAAGGCAACACCGCTCTCCACAT...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCACTCAGGAGAATTGCTaGAACCCGGGAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFTQENC*NPGDGG
Trigger: ACCTCCATCTCCCGGGTTCAAGCAATTCTCCTGAGT...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCGACACCTCTGGCCCTTaGATGCCCTCTGTTAACATC +
Preference number: 5 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGDTSGP*MPSVNI
Trigger: GATGTTAACAGAGGGCATCAAAGGGCCAGAGGTGTC...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCATGTGAAGTGGCCACCTaGTCTTATCTCTGGAATCTG +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSCEVAT*SYLWNL
Trigger: CAGATTCCAGAGATAAGACAAGGTGGCCACTTCACA...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACCCCAAAAGCTCAGGCTTAACGGATACAATTaGACTCTTGGAGCACTATAT +
Preference number: 5 (lower is better)
Translates to: LGWISTVSKGAEGPQKLRLNGYN*TLGALY
Trigger: ATATAGTGCTCCAAGAGTCAAATTGTATCCGTTAAG...CCTGAGCTTTTGGGGTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCCACTACACACTGAACTaGGATGAATGCTCTAAGGGG +
Preference number: 5 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLHYTLN*DECSKG
Trigger: CCCCTTAGAGCATTCATCCAAGTTCAGTGTGTAGTG...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGCTACCGGTACCGCAATaGATCAAACCGACAGGAAAG +
Preference number: 5 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWLPVPQ*IKPTGK
Trigger: CTTTCCTGTCGGTTTGATCAATTGCGGTACCGGTAG...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTACTCTACAGACTGATTaGGGCATTTGTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GVDTEREHGALQSATQQVTLQTD*GICSWW
Trigger: CCACCAGGAACAAATGCCCAAATCAGTCTGTAGAGT...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTTTCTCTCCTGGCTTATaGGCACAATCATCCACTTGC +
Preference number: 5 (lower is better)
Translates to: GVDTEREHGALQSATQQVFSPGL*AQSSTC
Trigger: GCAAGTGGATGATTGTGCCAATAAGCCAGGAGAGAA...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTCCAGCTGTTCCGGGTTaGCTTTCAATGGGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIPAVPG*LSMGKF
Trigger: AAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGG...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGATCTCTTTGTCCTTCTaGAATCGGCTCGGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRISLSF*NRLGVD
Trigger: GTCCACCCCGAGCCGATTCAAGAAGGACAAAGAGAT...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATCGGCTATGATCTCTTaGTCCTTCTTGAATCGGCTC +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRSAMIS*SFLNRL
Trigger: GAGCCGATTCAAGAAGGACAAAGAGATCATAGCCGA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACTCCAGGCATTTTTGTaGTTCTACCAGTTGAGCTCG +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRLQAFL*FYQLSS
Trigger: CGAGCTCAACTGGTAGAACAACAAAAATGCCTGGAG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGTTTTCGGAAGAAATCTaGCAGATCCTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWFSEEI*QILEKL
Trigger: CAGCTTCTCCAGGATCTGCAAGATTTCTTCCGAAAA...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCATTTTCGGAAGAAATCTaGCAGATCCTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSFSEEI*QILEKL
Trigger: CAGCTTCTCCAGGATCTGCAAGATTTCTTCCGAAAA...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGTTGAAAACTGAGGCATaGGTGGCTTCAAGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: YHAMPLSPFSPSATDQHWLKTEA*VASSVR
Trigger: CCTAACACTTGAAGCCACCAATGCCTCAGTTTTCAA...CCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCTGGAGGTTTCAAGGTaGTACTCCGCAGACAGATAT +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYLEVSR*YSADRY
Trigger: ATATCTGTCTGCGGAGTACAACCTTGAAACCTCCAG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTTCTTCATTCTCGATTTaGAGCGTGGCAAGGCGGGAC +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFISSFSI*SVARRD
Trigger: GTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAGA...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCCGCTCAGGACTGTCATaGTTGAGGCCACGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSRSGLS*LRPRFC
Trigger: GCAGAACCGTGGCCTCAACAATGACAGTCCTGAGCG...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTTACATTGTGCATGACTaGTCTGTTGGACCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIYIVHD*SVGPWG
Trigger: TCCCCAGGGTCCAACAGACAAGTCATGCACAATGTA...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTCCTCCCTTTATGGCCTaGCTTGGCTGGTTTTTACAT +
Preference number: 5 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPPPFMA*LGWFLH
Trigger: ATGTAAAAACCAGCCAAGCAAGGCCATAAAGGGAGG...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACCCTCCCTTTATGGCCTaGCTTGGCTGGTTTTTACAT +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYPPFMA*LGWFLH
Trigger: ATGTAAAAACCAGCCAAGCAAGGCCATAAAGGGAGG...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGAGGGCCAGTTCAGGGTaGGCTCAAAGACAAATGGAG +
Preference number: 5 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKRASSG*AQRQME
Trigger: CTCCATTTGTCTTTGAGCCAACCCTGAACTGGCCCT...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCATTCAAAGCTCAGTCTaGGCTGGATCTCCACGGTGT +
Preference number: 5 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGIQSSV*AGSPRC
Trigger: ACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACTCAGGAGAATTGCTaGAACCCGGGAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFITQENC*NPGDGG
Trigger: ACCTCCATCTCCCGGGTTCAAGCAATTCTCCTGAGT...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGATAAGCTCCTTGAAATaGGGGGCAGAACACCTCAAG +
Preference number: 5 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWISSLK*GAEHLK
Trigger: CTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTAT...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGCACTACACACTGAACTaGGATGAATGCTCTAAGGGG +
Preference number: 5 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWHYTLN*DECSKG
Trigger: CCCCTTAGAGCATTCATCCAAGTTCAGTGTGTAGTG...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TCACGTCTACAAGGAAAACGAGACAGTCTGAGGACCGACAGGGAGGTGAGATGGAATACATGTTGGCTATaGACATGCAACGTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SRLQGKRDSLRTDREVRWNTCWL*TCNVLR
Trigger: CCTCAACACGTTGCATGTCAATAGCCAACATGTATT...CCATCTCACCTCCCTGTCGGTCCTCAGACTGTCTCGTTTTCCTTGTAGACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCTCATCCATTCATGGGTaGCTTCTCTCTTGTGGCTAT +
Preference number: 5 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSASSIHG*LLSCGY
Trigger: ATAGCCACAAGAGAGAAGCAACCCATGAATGGATGA...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTCCCTCATCTCCTGTGTaGCTCCTTAATTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIPSSPV*LLNCGL
Trigger: GAGACCACAATTAAGGAGCAACACAGGAGATGAGGG...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCGTGTACCAACACTCATaGCTGAGCCCACTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGVYQHS*LSPLSL
Trigger: CAAGGAAAGTGGGCTCAGCAATGAGTGTTGGTACAC...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTATTGACCCCTGGCAGTaGGTAACATTTTCACCAGCC +
Preference number: 5 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIIDPWQ*VTFSPA
Trigger: GGCTGGTGAAAATGTTACCAACTGCCAGGGGTCAAT...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGGAAAACCTCACATCATaGCAAGTGCTTTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: STPDRQLLGVKDPSISRQENLTS*QVLSLP
Trigger: AGGAAGAGAAAGCACTTGCAATGATGTGAGGTTTTC...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTCTCCAGGCATTTTTGTaGTTCTACCAGTTGAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSVQCGERCCLHYKWCSILQAFL*FYQLSS
Trigger: CGAGCTCAACTGGTAGAACAACAAAAATGCCTGGAG...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGCTTTCTCTCCTTACTaGGTTCAGGAGCAAATACCA +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYAFSPY*VQEQIP
Trigger: TGGTATTTGCTCCTGAACCAAGTAAGGAGAGAAAGC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTGCCTGGCAAGACACTaGATCCTGTATTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKCLARH*ILYFWD
Trigger: GTCCCAGAAATACAGGATCAAGTGTCTTGCCAGGCA...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTTGCCTGGCAAGACACTaGATCCTGTATTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFICLARH*ILYFWD
Trigger: GTCCCAGAAATACAGGATCAAGTGTCTTGCCAGGCA...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCTGGCTATTGCTTCTATaGGCTCACATTCATCTTCAC +
Preference number: 5 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSAWLLLL*AHIHLH
Trigger: GTGAAGATGAATGTGAGCCAATAGAAGCAATAGCCA...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCTCCTTGGATGAGGACTaGTCTTCCGTGACTGGCCCA +
Preference number: 5 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSSLDED*SSVTGP
Trigger: TGGGCCAGTCACGGAAGACAAGTCCTCATCCAAGGA...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTGGGCTGTCGATCTTCTaGAGGGAGTCGTGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPGLSIF*RESCRL
Trigger: CAGCCGGCACGACTCCCTCAAGAAGATCGACAGCCC...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCTCTGGGTCCAGTGGCTaGTGGTCATTGAAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATSGSSG*WSLKPV
Trigger: CACGGGCTTCAATGACCACAAGCCACTGGACCCAGA...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGACAAGTGGTGCAGCATaGGATTTTCAAGTAAGTCTA +
Preference number: 5 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLTSGAA*DFQVSL
Trigger: TAGACTTACTTGAAAATCCAATGCTGCACCACTTGT...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGAAGGACACAAGTGGTGCAGCATaGGATTTTCAAGTAAGTCTA +
Preference number: 5 (lower is better)
Translates to: IQSSVLAGSPRCPRVLKDTSGAA*DFQVSL
Trigger: TAGACTTACTTGAAAATCCAATGCTGCACCACTTGT...GTCCTTCAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACAATTGCAAGTCTTTaGCATGAGCTAAACCCCGCT +
Preference number: 5 (lower is better)
Translates to: TQCHYHLSAQVPQTNTGYTIASL*HELNPA
Trigger: AGCGGGGTTTAGCTCATGCAAAAGACTTGCAATTGT...ATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTACAATTGCAAGTCTTTaGCATGAGCTAAACCCCGCT +
Preference number: 5 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPTIASL*HELNPA
Trigger: AGCGGGGTTTAGCTCATGCAAAAGACTTGCAATTGT...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCAGTGACATTAATAGCTTaGGAGATGGTGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSVTLIA*EMVSSS
Trigger: AGAGGAAGACACCATCTCCAAAGCTATTAATGTCAC...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGCTACCGGTACCGCAATaGATCAAACCGACAGGAAAG +
Preference number: 5 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKLPVPQ*IKPTGK
Trigger: CTTTCCTGTCGGTTTGATCAATTGCGGTACCGGTAG...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCCATAAGTCGCCAGAATaGGATCGCAAATATCCTAGA +
Preference number: 5 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLHKSPE*DRKYPR
Trigger: TCTAGGATATTTGCGATCCAATTCTGGCGACTTATG...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGTGCAGTTCCTTCTGCTaGGGTCTTTCTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWCSSFC*GLSLPF
Trigger: AAAAGGAAGAGAAAGACCCAAGCAGAAGGAACTGCA...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CACAGCTTCATGGGCAGGGCCCTGTGCAGGACACCCTATTTCCAAATGAACAAGCTGTCATGTTCCTTTTaGGAAACTTCCAATGGCTTT +
Preference number: 5 (lower is better)
Translates to: HSFMGRALCRTPYFQMNKLSCSF*ETSNGF
Trigger: AAAGCCATTGGAAGTTTCCAAAAAGGAACATGACAG...CTTGTTCATTTGGAAATAGGGTGTCCTGCACAGGGCCCTGCCCATGAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACAATTCGTAACATCTTaGGGTAGCTGGAAACACTGC +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRQFVTS*GSWKHC
Trigger: GCAGTGTTTCCAGCTACCCAAAGATGTTACGAATTG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACTCTGTATTGGACCTTaGTTAGAATACTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSLCIGP*LEYCVQ
Trigger: CTGGACACAGTATTCTAACAAAGGTCCAATACAGAG...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS CCA 90 bp AACTTAGTATTATACTGTGAGCGGGGCCTGGACTTCCTGTGTTTCTaGGGCTTAGGGGGAACATTTGGAGGCCTTGTAGTCATATATTCA +
Preference number: 5 (lower is better)
Translates to: NLVLYCERGLDFLCF*GLGGTFGGLVVIYS
Trigger: TGAATATATGACTACAAGGCCTCCAAATGTTCCCCCTAAGCCCCAGAAACACAGGAAGTCCAGGCCCCGCTCACAGTATAATACTAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTCTCCAGGCATTTTTGTaGTTCTACCAGTTGAGCTCG +
Preference number: 5 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGLQAFL*FYQLSS
Trigger: CGAGCTCAACTGGTAGAACAACAAAAATGCCTGGAG...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTCTGCTCCAGGCATTTTaGTTGTTCTACCAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFILLQAF*LFYQLS
Trigger: GCTCAACTGGTAGAACAACAAAAATGCCTGGAGCAG...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TGGTCTGGAGTAGGGAGCTCTATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCCTGGTCTTTCTTGTATaGTTGATGATCCTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: WSGVGSSIYAWVETSKLLLVFLV*LMILSA
Trigger: AGCACTAAGGATCATCAACAATACAAGAAAGACCAG...GAGCAGCTTAGAAGTCTCTACCCAGGCGTAAATAGAGCTCCCTACTCCAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGTGGAATGCAATCTCTTaGCTCTTTTTAAACATCCTG +
Preference number: 5 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLWNAIS*LFLNIL
Trigger: CAGGATGTTTAAAAAGAGCAAAGAGATTGCATTCCA...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACAATTTGCTTTTCCTCTaGTTTTTCGGCCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDNLLFL*FFGLFQ
Trigger: CTGAAAGAGGCCGAAAAACAAGAGGAAAAGCAAATT...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATTTGAAAACTGAGGCATaGGTGGCTTCAAGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNLKTEA*VASSVR
Trigger: CCTAACACTTGAAGCCACCAATGCCTCAGTTTTCAA...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTTTGAAAACTGAGGCATaGGTGGCTTCAAGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: SSVQCGERCCLHYKWCSILKTEA*VASSVR
Trigger: CCTAACACTTGAAGCCACCAATGCCTCAGTTTTCAA...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTGGCTATTGCTTCTATaGGCTCACATTCATCTTCAC +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYWLLLL*AHIHLH
Trigger: GTGAAGATGAATGTGAGCCAATAGAAGCAATAGCCA...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCAGGGAGGCACCCTTCTaGAAGGATAGTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSREAPF*KDSSLA
Trigger: TGCCAGAGAACTATCCTTCAAGAAGGGTGCCTCCCT...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGGGTGCCACCATAGGCTaGAAAGTACTCATTGTGTCA +
Preference number: 5 (lower is better)
Translates to: MWRAVLPSLQVVQHWIFKGATIG*KVLIVS
Trigger: TGACACAATGAGTACTTTCAAGCCTATGGTGGCACC...CTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGAGATCATTGCAGTAGATaGTGGGACCCTGCTATAAAT +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRDHCSR*WDPAIN
Trigger: ATTTATAGCAGGGTCCCACAATCTACTGCAATGATC...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGCTTAACGGATACAATTaGACTCTTGGAGCACTATAT +
Preference number: 5 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLLNGYN*TLGALY
Trigger: ATATAGTGCTCCAAGAGTCAAATTGTATCCGTTAAG...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp AGCACCCCTGATAGACAGCTGTTGGGTGTGAAGGATCCATCCATAAGTCGCCAGCTGTTTTCAATTCTTTaGGATATGTACCCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: STPDRQLLGVKDPSISRQLFSIL*DMYPEV
Trigger: CACTTCTGGGTACATATCCAAAAGAATTGAAAACAG...CTGGCGACTTATGGATGGATCCTTCACACCCAACAGCTGTCTATCAGGGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTGTCCAAGGGTGCTGTCTGCATGCATATTGTaGGACAACAGATCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: SAIQSSVLAGSPRCPRVLSACIL*DNRSLE
Trigger: TTCTAAAGATCTGTTGTCCAACAATATGCATGCAGA...CAGCACCCTTGGACACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATTCAAACGTGAATACTaGGTTGTACATCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRFKREY*VVHPGQ
Trigger: TTGGCCAGGATGTACAACCAAGTATTCACGTTTGAA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AATGAAATGGTGAGAGGCAGTACAGAGCACGGGCGAATGCGATGCTGTCAGCAGTGTGTAAACAGATACTaGCACTATAGTGTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: NEMVRGSTEHGRMRCCQQCVNRY*HYSVLG
Trigger: GCCTAAAACACTATAGTGCAAGTATCTGTTTACACA...CTGCTGACAGCATCGCATTCGCCCGTGCTCTGTACTGCCTCTCACCATTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACAAATGCTCCGTAAGTaGTCAAGGCACATGATATTC +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRQMLRK*SRHMIF
Trigger: GAATATCATGTGCCTTGACAACTTACGGAGCATTTG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCTCAGCTATCCCTTTaGAGTTTGAATGGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRPQLSL*SLNGKE
Trigger: TTCTTTGCCATTCAAACTCAAAAGGGATAGCTGAGG...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS TCA 90 bp AACGACTGTGCTGGAAGCATTCAGAAACATCATAGTCCTCGATGGTaGCCATATCTTGTATCGTCTGCAAGGTGGCTTCAGTCGTTTTCT +
Preference number: 5 (lower is better)
Translates to: NDCAGSIQKHHSPRW*PYLVSSARWLQSFS
Trigger: AGAAAACGACTGAAGCCACCTTGCAGACGATACAAGATATGGTCACCATCGAGGACTATGATGTTTCTGAATGCTTCCAGCACAGTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCATCTCTTTGTCCTTCTaGAATCGGCTCGGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATISLSF*NRLGVD
Trigger: GTCCACCCCGAGCCGATTCAAGAAGGACAAAGAGAT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GGTGTTGACACTGAACGTGAACATGGAGCTCTACAAAGCGCCACTCAGCAGGTTTCGAATTTCTTTGACTaGACTTTCATACTCGGCTAT +
Preference number: 5 (lower is better)
Translates to: GVDTEREHGALQSATQQVSNFFD*TFILGY
Trigger: ATAGCCGAGTATGAAAGTCAAGTCAAAGAAATTCGA...AACCTGCTGAGTGGCGCTTTGTAGAGCTCCATGTTCACGTTCAGTGTCAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTCTGGTCTTTCTTGTATaGTTGATGATCCTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: LYSNEVWHSGSSAFRSQPLVFLV*LMILSA
Trigger: AGCACTAAGGATCATCAACAATACAAGAAAGACCAG...AGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CACTGGCTATACTCCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCATGGAATGCAATCTCTTaGCTCTTTTTAAACATCCTG +
Preference number: 5 (lower is better)
Translates to: HWLYSNEVWHSGSSAFRSWNAIS*LFLNIL
Trigger: CAGGATGTTTAAAAAGAGCAAAGAGATTGCATTCCA...TGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGGAGTATAGCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACAGGTGACTGGCAAGGCTaGGGGACCCTAGGTCAACTG +
Preference number: 5 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTGDWQG*GTLGQL
Trigger: CAGTTGACCTAGGGTCCCCAAGCCTTGCCAGTCACC...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACGCTCAGGACTGTCATaGTTGAGGCCACGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRRSGLS*LRPRFC
Trigger: GCAGAACCGTGGCCTCAACAATGACAGTCCTGAGCG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTGTGACATTAATAGCTTaGGAGATGGTGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLIVTLIA*EMVSSS
Trigger: AGAGGAAGACACCATCTCCAAAGCTATTAATGTCAC...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCAGCTCAAATTCCAGTTaGCTTTATGGATCTGACAAA +
Preference number: 5 (lower is better)
Translates to: VLIVSYHAMPLSPFSPSASSNSS*LYGSDK
Trigger: TTTGTCAGATCCATAAAGCAAACTGGAATTTGAGCT...GGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp CCAATGAGGTGTGGCATTCGGGTTCTTCTGCCTTCAGGTCACAACCTTTCTGACGCTATCTACTACATATaGCTAGACCTCAAGTTATCT +
Preference number: 5 (lower is better)
Translates to: PMRCGIRVLLPSGHNLSDAIYYI*LDLKLS
Trigger: AGATAACTTGAGGTCTAGCAATATGTAGTAGATAGC...GTCAGAAAGGTTGTGACCTGAAGGCAGAAGAACCCGAATGCCACACCTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGGGAAAACAATTCCTTaGACAGGTGGGTCCCTCACC +
Preference number: 5 (lower is better)
Translates to: GVAFITSGAALDFQVSLSGKTIP*TGGSLT
Trigger: GGTGAGGGACCCACCTGTCAAAGGAATTGTTTTCCC...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TGCAGTAGATTGTGGGACCCTGCTATAAATTATTCTACAGGTGGCTCAAGGGGCTGTCATTGTACAATTTaGAATGTGCCACTGGACCAC +
Preference number: 5 (lower is better)
Translates to: CSRLWDPAINYSTGGSRGCHCTI*NVPLDH
Trigger: GTGGTCCAGTGGCACATTCAAAATTGTACAATGACA...GCCCCTTGAGCCACCTGTAGAATAATTTATAGCAGGGTCCCACAATCTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTAAAAATTCGCATTTTTaGATCCTCCTGCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SSVQCGERCCLHYKWCSIKNSHF*ILLPWP
Trigger: AGGCCAAGGCAGGAGGATCAAAAAATGCGAATTTTT...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTTTGACATGCAACGTGTaGAGGAAAACGATGTCAGTA +
Preference number: 5 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLILTCNV*RKTMSV
Trigger: TACTGACATCGTTTTCCTCAACACGTTGCATGTCAA...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATTTACGCCTGGGTAGAGACTTCTAAGCTGCTCTGTGTCTCAGGGTTTCTGTGGCCTGGGTTCTTTTTCTaGCATTATAGGAAGATGACA +
Preference number: 5 (lower is better)
Translates to: IYAWVETSKLLCVSGFLWPGFFF*HYRKMT
Trigger: TGTCATCTTCCTATAATGCAAGAAAAAGAACCCAGG...CCACAGAAACCCTGAGACACAGAGCAGCTTAGAAGTCTCTACCCAGGCGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS GCA 90 bp CCAGCCCTCCCTAGATTTCACTACGCTTCCTCAAGGTTAGCACCATaGTTTAGAAGAAAATCGTGCCAGGAGAACTTAATCATGACATAT +
Preference number: 5 (lower is better)
Translates to: PALPRFHYASSRLAP*FRRKSCQENLIMTY
Trigger: ATATGTCATGATTAAGTTCTCCTGGCACGATTTTCTTCTAAAGCATGGTGCTAACCTTGAGGAAGCGTAGTGAAATCTAGGGAGGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537556.1
CDS-3UTR CAA 90 bp GCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACGTCTTTCTTGTATTGTaGATGATCCTTAGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: AMPLSPFSPSATDQHWLYVFLVL*MILSAS
Trigger: AGAAGCACTAAGGATCATCAACAATACAAGAAAGAC...GTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CATTGTCAGCTACCACGCAATGCCATTATCACCTTTCAGCCCAAGTGCCACAGATGGAATGCAATCTCTTaGCTCTTTTTAAACATCCTG +
Preference number: 5 (lower is better)
Translates to: HCQLPRNAIITFQPKCHRWNAIS*LFLNIL
Trigger: CAGGATGTTTAAAAAGAGCAAAGAGATTGCATTCCA...TCTGTGGCACTTGGGCTGAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTAATTTGCTTTTCCTCTaGTTTTTCGGCCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFINLLFL*FFGLFQ
Trigger: CTGAAAGAGGCCGAAAAACAAGAGGAAAAGCAAATT...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTTCCTTGGATGAGGACTaGTCTTCCGTGACTGGCCCA +
Preference number: 5 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPSLDED*SSVTGP
Trigger: TGGGCCAGTCACGGAAGACAAGTCCTCATCCAAGGA...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGACAATATCCTGAGCAATaGTCTCTGGGTCCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: IDKMLIGLQVISAAASRRQYPEQ*SLGPVA
Trigger: AGCCACTGGACCCAGAGACAATTGCTCAGGATATTG...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TTGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGGTGACATTAATAGCTTaGGAGATGGTGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LFKRASAIQSSVLAGSPRVTLIA*EMVSSS
Trigger: AGAGGAAGACACCATCTCCAAAGCTATTAATGTCAC...CCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTGGCCTCAGGTGCTTCTaGCTGCCTTCATTTCCACAG +
Preference number: 5 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPGLRCF*LPSFPQ
Trigger: CTGTGGAAATGAAGGCAGCAAGAAGCACCTGAGGCC...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAACACAAGCACATGTGTaGATATCCAGCCCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: IDKMLIGLQVISAAASRRTQAHV*ISSPVP
Trigger: TGGGACTGGGCTGGATATCAACACATGTGCTTGTGT...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATGAAGCCTGATAAGCTCCTTGAAATTGGGGGCAGAACACCTCAAGGCCTCATTTCGAATTTCTTTGACTaGACTTTCATACTCGGCTAT +
Preference number: 5 (lower is better)
Translates to: MKPDKLLEIGGRTPQGLISNFFD*TFILGY
Trigger: ATAGCCGAGTATGAAAGTCAAGTCAAAGAAATTCGA...AATGAGGCCTTGAGGTGTTCTGCCCCCAATTTCAAGGAGCTTATCAGGCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TGTTTAAAAGGGCTAGTGCTATTCAAAGCTCAGTCTTGGCTGGATCTCCACGGTTTGTTGTTCTACCAGTaGAGCTCGAATTTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: CLKGLVLFKAQSWLDLHGLLFYQ*SSNFFD
Trigger: GTCAAAGAAATTCGAGCTCAACTGGTAGAACAACAA...ACCGTGGAGATCCAGCCAAGACTGAGCTTTGAATAGCACTAGCCCTTTTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCTGCTCCAGGCATTTTaGTTGTTCTACCAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: GVAFITSGAALDFQVSLSLLQAF*LFYQLS
Trigger: GCTCAACTGGTAGAACAACAAAAATGCCTGGAGCAG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGCTTTCTCTCCTTACTaGGTTCAGGAGCAAATACCA +
Preference number: 5 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSAFSPY*VQEQIP
Trigger: TGGTATTTGCTCCTGAACCAAGTAAGGAGAGAAAGC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ATGGAACCGAAGGTGCTCATTGTCAGCTACCACGCAATGCCATTATCACCTTTCCAAGTCATGTTTGGCTaGAAGTTTTGTGATGAGATT +
Preference number: 5 (lower is better)
Translates to: MEPKVLIVSYHAMPLSPFQVMFG*KFCDEI
Trigger: AATCTCATCACAAAACTTCAAGCCAAACATGACTTG...GAAAGGTGATAATGGCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGGACAGGCATCAATGTaGGGCCAAAGCAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRGQASM*GQSKWP
Trigger: TGGCCATTTGCTTTGGCCCAACATTGATGCCTGTCC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTGGGGAGTTCATGTCCTaGGATGAGGACTTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPGEFMS*DEDLSS
Trigger: GGAAGACAAGTCCTCATCCAAGGACATGAACTCCCC...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGGGGAGTTCATGTCCTaGGATGAGGACTTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRGEFMS*DEDLSS
Trigger: GGAAGACAAGTCCTCATCCAAGGACATGAACTCCCC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCCTCCCTTTATGGCCTaGCTTGGCTGGTTTTTACAT +
Preference number: 5 (lower is better)
Translates to: GVAFITSGAALDFQVSLSPPFMA*LGWFLH
Trigger: ATGTAAAAACCAGCCAAGCAAGGCCATAAAGGGAGG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATaGGATTTTCAAGTAAGTCTA +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFITSGAA*DFQVSL
Trigger: TAGACTTACTTGAAAATCCAATGCTGCACCACTTGT...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAACCGAAGGTGCTCATaGTCAGCTACCACGCAATGC +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRNRRCS*SATTQC
Trigger: GCATTGCGTGGTAGCTGACAATGAGCACCTTCGGTT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp CAAAAGAGAACACTGCATGAACCAAGGCCTCAGGTGCTTCTTGCTGCCTTCATTTTTTCTAGGCAGTTATaGAATAACGGATCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: QKRTLHEPRPQVLLAAFIFSRQL*NNGSLE
Trigger: CTCCAAAGATCCGTTATTCAATAACTGCCTAGAAAA...AATGAAGGCAGCAAGAAGCACCTGAGGCCTTGGTTCATGCAGTGTTCTCTTTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAAGGGCCAGTTCAGGGTaGGCTCAAAGACAAATGGAG +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRRASSG*AQRQME
Trigger: CTCCATTTGTCTTTGAGCCAACCCTGAACTGGCCCT...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp ATTAATAGCTTTGGAGATGGTGTCTTCCTCTCCTTTCCCAGGTTAAGTTCAAGCGCTGATAATGTGCTATaGCTTAAACTGGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: INSFGDGVFLSFPRLSSSADNVL*LKLGGG
Trigger: TCCACCACCCAGTTTAAGCAATAGCACATTATCAGC...GCTTGAACTTAACCTGGGAAAGGAGAGGAAGACACCATCTCCAAAGCTATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTAGCCAGCAAACACCCTaGCTCTGCCTTTCTAAGATT +
Preference number: 5 (lower is better)
Translates to: GVAFITSGAALDFQVSLSSQQTP*LCLSKI
Trigger: AATCTTAGAAAGGCAGAGCAAGGGTGTTTGCTGGCT...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp CCATTATCACCTTTCAGCCCAAGTGCCACAGACCAACACTGGCTATACTCCAATAAGGAGAAATACAGCTaGATTGTGTTACTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: PLSPFSPSATDQHWLYSNKEKYS*IVLLSL
Trigger: CAAACTCAGTAACACAATCAAGCTGTATTTCTCCTT...ATTGGAGTATAGCCAGTGTTGGTCTGTGGCACTTGGGCTGAAAGGTGATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTCACAATCCTTCTTGTTaGTCGATCTCTCCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: GVAFITSGAALDFQVSLSHNPSC*SISPWL
Trigger: GAGCCAAGGAGAGATCGACAAACAAGAAGGATTGTG...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp AGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTACAAGTGGTGCAGCATTCTATCCCTTTTGAGTTaGAATGGCAAAGAAATAAGC +
Preference number: 5 (lower is better)
Translates to: SSVQCGERCCLHYKWCSILSLLS*NGKEIS
Trigger: GCTTATTTCTTTGCCATTCAAACTCAAAAGGGATAG...AATGCTGCACCACTTGTAATGAAGGCAACACCGCTCTCCACATTGTACAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR CAA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTCCAGCTGTTCCGGGTTaGCTTTCAATGGGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPPAVPG*LSMGKF
Trigger: AAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGG...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp GGCTACATTAAACCTGAAGCTCTGTACAATGTGGAGAGCGGTGTTGCCTTCATTGTCTTTCTTGTATTGTaGATGATCCTTAGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GYIKPEALYNVESGVAFIVFLVL*MILSAS
Trigger: AGAAGCACTAAGGATCATCAACAATACAAGAAAGAC...AATGAAGGCAACACCGCTCTCCACATTGTACAGAGCTTCAGGTTTAATGTAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGATGGTGACCATATCTaGTATCGTCTGCAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRDGDHI*YRLQGG
Trigger: GCCACCTTGCAGACGATACAAGATATGGTCACCATC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGATGTGGAGAGCGGTGTaGCCTTCATTACAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLMWRAV*PSLQVV
Trigger: CACCACTTGTAATGAAGGCAACACCGCTCTCCACAT...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGATCTCTCCACCTGACATaGTTCTTCCTGCAAATGAGT +
Preference number: 5 (lower is better)
Translates to: IDKMLIGLQVISAAASRRSLHLT*FFLQMS
Trigger: ACTCATTTGCAGGAAGAACAATGTCAGGTGGAGAGA...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAGACTGCTTGGAAAGCTaGAATCCTCTCTCATACGTT +
Preference number: 5 (lower is better)
Translates to: IDKMLIGLQVISAAASRRDCLES*NPLSYV
Trigger: AACGTATGAGAGAGGATTCAAGCTTTCCAAGCAGTC...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGAGGTGCCACCATAGGCTaGAAAGTACTCATTGTGTCA +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRGATIG*KVLIVS
Trigger: TGACACAATGAGTACTTTCAAGCCTATGGTGGCACC...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACCAGTCCCATTTCTCTaGCTGAGACTGACCTTGATA +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRPVPFL*LRLTLI
Trigger: TATCAAGGTCAGTCTCAGCAAGAGAAATGGGACTGG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGCTTACACAAGGGGTTCCTaGGGTATGTCAGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: LFICPSVDGHLHCFYHLAYTRGS*GMSETE
Trigger: TTCTGTCTCTGACATACCCAAGGAACCCCTTGTGTA...AGCCAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ATAGATAAAATGCTCATAGGTCTACAGGTGATATCAGCTGCTGCTAGTAGGAGAACCTCTGATTACTGTTaGACATGTTCCAAATGCTCC +
Preference number: 5 (lower is better)
Translates to: IDKMLIGLQVISAAASRRTSDYC*TCSKCS
Trigger: GGAGCATTTGGAACATGTCAAACAGTAATCAGAGGT...TCTCCTACTAGCAGCAGCTGATATCACCTGTAGACCTATGAGCATTTTATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTAATTTGCTTTTCCTCTaGTTTTTCGGCCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: GVAFITSGAALDFQVSLSNLLFL*FFGLFQ
Trigger: CTGAAAGAGGCCGAAAAACAAGAGGAAAAGCAAATT...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACACTGGAGGTTTCAAGGTaGTACTCCGCAGACAGATAT +
Preference number: 5 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTLEVSR*YSADRY
Trigger: ATATCTGTCTGCGGAGTACAACCTTGAAACCTCCAG...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGTATGTTTAGGAGGCTaGTACACTCTCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLVCLGG*YTLSFS
Trigger: TGAGAAGCTGAGAGTGTACAAGCCTCCTAAACATAC...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TGCTTATTCATTTGTCCCTCTGTTGATGGACATTTGCATTGCTTCTATCATTTGGGCACAATCATCCACTaGCATTTAGAGGGACATGAT +
Preference number: 5 (lower is better)
Translates to: CLFICPSVDGHLHCFYHLGTIIH*HLEGHD
Trigger: ATCATGTCCCTCTAAATGCAAGTGGATGATTGTGCC...CAAATGATAGAAGCAATGCAAATGTCCATCAACAGAGGGACAAATGAATAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGATCAAAGCGGCAGACATaGAATTCATTTCAGTTCCGC +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRSKRQT*NSFQFR
Trigger: GCGGAACTGAAATGAATTCAATGTCTGCCGCTTTGA...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS TCA 90 bp AATATGTGGGTTACATTTGTAATGCCACAAACACACAACGAGCCATaGGGGGAAAGAATGAAAGCCTTTCAGATAACAATTCGTAACATC +
Preference number: 5 (lower is better)
Translates to: NMWVTFVMPQTHNEP*GERMKAFQITIRNI
Trigger: GATGTTACGAATTGTTATCTGAAAGGCTTTCATTCTTTCCCCTCATGGCTCGTTGTGTGTTTGTGGCATTACAAATGTAACCCACATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR CAA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCTTTTCTAGGCAGTTATaGAATAACGGATCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATFSRQL*NNGSLE
Trigger: CTCCAAAGATCCGTTATTCAATAACTGCCTAGAAAA...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TACTACAGATGTACATTGACACAATTAGGTAACAGTCACAAGCAGGAAGCTACCAAGGAGAAATTCAGCTaGATTGTGTTACTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: YYRCTLTQLGNSHKQEATKEKFS*IVLLSL
Trigger: CAAACTCAGTAACACAATCAAGCTGAATTTCTCCTT...GGTAGCTTCCTGCTTGTGACTGTTACCTAATTGTGTCAATGTACATCTGTAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp GGTGTTGCCTTCATTACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTTCTGTTGATGGACATTaGCATTGCTTCTATCATTTG +
Preference number: 5 (lower is better)
Translates to: GVAFITSGAALDFQVSLSSVDGH*HCFYHL
Trigger: CAAATGATAGAAGCAATGCAAATGTCCATCAACAGA...ACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTAATGAAGGCAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS-3UTR CAA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTTCATTTGTCCCTCTGTaGATGGACATTTGCATTGCT +
Preference number: 5 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPSFVPL*MDICIA
Trigger: AGCAATGCAAATGTCCATCAACAGAGGGACAAATGA...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 90 bp AAGCATCATTTCTTCCAGGCTCTGAACCATTACACATTTGCCATTTaGCACATACAGAGACTGACATCTGGTAATTTTTATTTAGTGCAT +
Preference number: 5 (lower is better)
Translates to: KHHFFQALNHYTFAI*HIQRLTSGNFYLVH
Trigger: ATGCACTAAATAAAAATTACCAGATGTCAGTCTCTGTATGTGCCAAATGGCAAATGTGTAATGGTTCAGAGCCTGGAAGAAATGATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS-3UTR CAA 90 bp ACAAATGCCCGTGTTAATTTAGCTAGTCTCAGACATTACATTCGACAACATAGACTGGTCTTTCTTGTATaGTTGATGATCCTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: TNARVNLASLRHYIRQHRLVFLV*LMILSA
Trigger: AGCACTAAGGATCATCAACAATACAAGAAAGACCAG...TCTATGTTGTCGAATGTAATGTCTGAGACTAGCTAAATTAACACGGGCATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS-3UTR CAA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACATTGTTGTTCTACCAGTaGAGCTCGAATTTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTLLFYQ*SSNFFD
Trigger: GTCAAAGAAATTCGAGCTCAACTGGTAGAACAACAA...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS-3UTR CAA 90 bp TACAAGTGGTGCAGCATTGGATTTTCAAGTAAGTCTAAGTGTTTCTATTGTCCTTATTATTATTTCTGTTaGGGAAATGGAGGCATGGGT +
Preference number: 5 (lower is better)
Translates to: YKWCSIGFSSKSKCFYCPYYYFC*GNGGMG
Trigger: ACCCATGCCTCCATTTCCCAAACAGAAATAATAATA...AGGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCACTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 90 bp TGTCCTCTGCTTCTTAAAGCACAAATATACAATTCATACTCTTTCTaGAATATATACATGATACGATGTATCATCCAGGTCATCTTCCCA +
Preference number: 5 (lower is better)
Translates to: CPLLLKAQIYNSYSF*NIYMIRCIIQVIFP
Trigger: TGGGAAGATGACCTGGATGATACATCGTATCATGTATATATTCCAGAAAGAGTATGAATTGTATATTTGTGCTTTAAGAAGCAGAGGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537556.1
CDS-3UTR CAA 90 bp AGACATTACATTCGACAACATAGAAAAGCCAAAAGATCTCCAGTTATAAGCACACAAGTCATGTTTGGCTaGAAGTTTTGTGATGAGATT +
Preference number: 5 (lower is better)
Translates to: RHYIRQHRKAKRSPVISTQVMFG*KFCDEI
Trigger: AATCTCATCACAAAACTTCAAGCCAAACATGACTTG...TGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTGTCGAATGTAATGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS TCA 72 bp GGCCAGGCCTGCGCCTCCGCTCAGGACTGTCATTGTTaGGGCCACGGTTCTGCAGCAGGCCCCGGGGGTGAC +
Preference number: 6 (lower is better)
Translates to: GQACASAQDCHC*GHGSAAGPGGD
Trigger: GTCACCCCCGGGGCCTGCTGCAGAACCGTGGCCTCAACAATGACAGTCCTGAGCGGAGGCGCAGGCCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CAA 72 bp CCATGGCCAGGCCTGCGCCTCCGCTCAGGACTGTCATaGTTGAGGCCACGGTTCTGCAGCAGGCCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: PWPGLRLRSGLS*LRPRFCSRPRG
Trigger: CCCCCGGGGCCTGCTGCAGAACCGTGGCCTCAACAATGACAGTCCTGAGCGGAGGCGCAGGCCTGGCCATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS GCA 72 bp GTGGAGGGTGGAGCGGGCAATGGCCATCACTGGTCCTaGCAGGACGCCTTACTGGAGGGGGTGGCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: VEGGAGNGHHWS*QDALLEGVALL
Trigger: GAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCCCGCTCCACCCTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp GGGCATGTGGAGGGTGGAGCGGGCAATGGCCATCACTaGTCCTGCCAGGACGCCTTACTGGAGGGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: GHVEGGAGNGHH*SCQDALLEGVA
Trigger: AGCCACCCCCTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCCCGCTCCACCCTCCACATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp AGGGAGTCGTGCCGGCTGATGTTGGTCAGGCTGCCATaGCCAGGCCTGCGCCTCCGCTCAGGACTGTCATTG +
Preference number: 6 (lower is better)
Translates to: RESCRLMLVRLP*PGLRLRSGLSL
Trigger: CAATGACAGTCCTGAGCGGAGGCGCAGGCCTGGCCATGGCAGCCTGACCAACATCAGCCGGCACGACTCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp GGCAGTACTGCAAGGCTGAGGTGCAGTGGCTCCTCATaGCCCCAGGAGGAGCGGAGGCTTAGGGGCCTGATT +
Preference number: 6 (lower is better)
Translates to: GSTARLRCSGSS*PQEERRLRGLI
Trigger: AATCAGGCCCCTAAGCCTCCGCTCCTCCTGGGGCCATGAGGAGCCACTGCACCTCAGCCTTGCAGTACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542841.1
CDS CCA 72 bp GCAATGGCCATCACTGGTCCTGCCAGGACGCCTTACTaGAGGGGGTGGCTCTCCTCTTTTTCGTTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: AMAITGPARTPY*RGWLSSFSLPG
Trigger: GCCAGGCAACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CAA 72 bp CAGTGGTCACAACCCGTTCTCCTTGGAGAGGCAGAGTaGTACTCCCACACGCAGGCAATCCAGAGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: QWSQPVLLGEAE*YSHTQAIQRQR
Trigger: GCGCTGCCTCTGGATTGCCTGCGTGTGGGAGTACAACTCTGCCTCTCCAAGGAGAACGGGTTGTGACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CAA 90 bp TGCCCTGATGACGTGGACCTTCTAATGGGAGGGCTGTCGATCTTCTaGAGGGAGTCGTGCCGGCTGATGTTGGTCAGGCTGCCATGGCCA +
Preference number: 6 (lower is better)
Translates to: CPDDVDLLMGGLSIF*RESCRLMLVRLPWP
Trigger: TGGCCATGGCAGCCTGACCAACATCAGCCGGCACGACTCCCTCAAGAAGATCGACAGCCCTCCCATTAGAAGGTCCACGTCATCAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS TCA 72 bp AGGATGACGGTCTGTCGGGGAGTTCATGTCCTTGGATaGGGACTTGTCTTCCGTGACTGGCCCACTGCTGGC +
Preference number: 6 (lower is better)
Translates to: RMTVCRGVHVLG*GLVFRDWPTAG
Trigger: GCCAGCAGTGGGCCAGTCACGGAAGACAAGTCCTCATCCAAGGACATGAACTCCCCGACAGACCGTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp GCAATGGCCATCACTGGTCCTGCCAGGACGCCTTACTaGAGGGGGTGGCTCTCCTCTTTTTCGTTGCCTAGA +
Preference number: 6 (lower is better)
Translates to: AMAITGPARTPY*RGWLSSFSLPR
Trigger: TCTAGGCAACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542841.1
CDS CAA 72 bp GACGTGGACCTTCTAATGGGAGGGCTGTCGATCTTCTaGAGGGAGTCGTGCCGGCTGATGTTGGTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: DVDLLMGGLSIF*RESCRLMLVRL
Trigger: CAGCCTGACCAACATCAGCCGGCACGACTCCCTCAAGAAGATCGACAGCCCTCCCATTAGAAGGTCCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CAA 90 bp GCTGGAGGCTTCAGCTGCACGCCCATTCTGGGTGCCACCATAGGCTaGAAAGTACTCATTGTGTCACTGGAGGAGCTCGTGCTACGTCGA +
Preference number: 6 (lower is better)
Translates to: AGGFSCTPILGATIG*KVLIVSLEELVLRR
Trigger: TCGACGTAGCACGAGCTCCTCCAGTGACACAATGAGTACTTTCAAGCCTATGGTGGCACCCAGAATGGGCGTGCAGCTGAAGCCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS GCA 72 bp GGAGAAAACAGAAGAGCTTATCACACCGGGCAGTACTaGAAGGCTGAGGTGCAGTGGCTCCTCATGGCCCCA +
Preference number: 6 (lower is better)
Translates to: GENRRAYHTGQY*KAEVQWLLMAP
Trigger: TGGGGCCATGAGGAGCCACTGCACCTCAGCCTTGCAGTACTGCCCGGTGTGATAAGCTCTTCTGTTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542841.1
CDS TCA 72 bp ATTGTGTCACTGGAGGAGCTCGTGCTACGTCGAATCTaGGGCTCGGAGCTCCTGAGGGCAACGTTGTGCAAA +
Preference number: 6 (lower is better)
Translates to: IVSLEELVLRRI*GSELLRATLCK
Trigger: TTTGCACAACGTTGCCCTCAGGAGCTCCGAGCCTCAGATTCGACGTAGCACGAGCTCCTCCAGTGACACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp ATCACTGGTCCTGCCAGGACGCCTTACTGGAGGGGGTaGCTCTCCTCTTTTTCGTTGCCTAGACATTCACAG +
Preference number: 6 (lower is better)
Translates to: ITGPARTPYWRG*LSSFSLPRHSQ
Trigger: CTGTGAATGTCTAGGCAACGAAAAAGAGGAGAGCCACCCCCTCCAGTAAGGCGTCCTGGCAGGACCAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542841.1
CDS TCA 72 bp GAGCAATTGTCTCTGGGTCCAGTGGCTTGTGGTCATTaGAGCCCGTGTATTGCCCTGATGACGTGGACCTTC +
Preference number: 6 (lower is better)
Translates to: EQLSLGPVACGH*SPCIALMTWTF
Trigger: GAAGGTCCACGTCATCAGGGCAATACACGGGCTTCAATGACCACAAGCCACTGGACCCAGAGACAATTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS GCA 72 bp TCTTCATTCTCGATTTTGAGCGTGGCAAGGCGGGACTaGAACTGTTGGTACCTGAGCATGAGCTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SSFSILSVARRD*NCWYLSMSSAW
Trigger: CCAGGCAGAGCTCATGCTCAGGTACCAACAGTTGCAGTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS GCA 72 bp AAGGGCTGGAGGCTTCAGCTGCACGCCCATTCTGGGTaGCACCATAGGCTTGAAAGTACTCATTGTGTCACT +
Preference number: 6 (lower is better)
Translates to: KGWRLQLHAHSG*HHRLESTHCVT
Trigger: AGTGACACAATGAGTACTTTCAAGCCTATGGTGGCACCCAGAATGGGCGTGCAGCTGAAGCCTCCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp TTATACTGTGAGCGGGGCCTGGACTTCCTGTGTTTCTaGGGCTTAGGGGGAACATTTGGAGGCCTTGTAGTC +
Preference number: 6 (lower is better)
Translates to: LYCERGLDFLCF*GLGGTFGGLVV
Trigger: GACTACAAGGCCTCCAAATGTTCCCCCTAAGCCCCAGAAACACAGGAAGTCCAGGCCCCGCTCACAGTATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CAA 72 bp GGGCAAGTTTTGTTCAGTGGTCACAACCCGTTCTCCTaGGAGAGGCAGAGTTGTACTCCCACACGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: GQVLFSGHNPFS*ERQSCTPTRRQ
Trigger: TTGCCTGCGTGTGGGAGTACAACTCTGCCTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CAA 72 bp TTCAGCTGCACGCCCATTCTGGGTGCCACCATAGGCTaGAAAGTACTCATTGTGTCACTGGAGGAGCTCGTG +
Preference number: 6 (lower is better)
Translates to: FSCTPILGATIG*KVLIVSLEELV
Trigger: CACGAGCTCCTCCAGTGACACAATGAGTACTTTCAAGCCTATGGTGGCACCCAGAATGGGCGTGCAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000542841.1
ENST00000543397.1
ENST00000631006.2
CDS CAA 90 bp GCTTTCAATGGGCAAGTTTTGTTCAGTGGTCACAACCCGTTCTCCTaGGAGAGGCAGAGTTGTACTCCCACACGCAGGCAATCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: AFNGQVLFSGHNPFS*ERQSCTPTRRQSRG
Trigger: GCCTCTGGATTGCCTGCGTGTGGGAGTACAACTCTGCCTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CAA 90 bp GGAGAGCATACCATCTTCACTTGTGTGGGGCTCTGTACCAGCATCTaGGTCCACTTCCTCCAATGTACCGTGCTCACTGTATGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: GEHTIFTCVGLCTSI*VHFLQCTVLTVWAV
Trigger: GACAGCCCATACAGTGAGCACGGTACATTGGAGGAAGTGGACCAAGATGCTGGTACAGAGCCCCACACAAGTGAAGATGGTATGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537585.1
CDS TCA 72 bp AACGTATCATCCATATCCTGCACCACTATATACTGGTaGGGCACCAGCCCGTCAATCCCGTTGTGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: NVSSISCTTIYW*GTSPSIPLCLP
Trigger: AGGCAGGCACAACGGGATTGACGGGCTGGTGCCTCACCAGTATATAGTGGTGCAGGATATGGATGATACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS GCA 72 bp TCCCTTTATGGCCTTGCTTGGCTGGTTTTTACATTGTaGATGACTTGTCTGTTGGACCCTGGGGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: SLYGLAWLVFTL*MTCLLDPGEVG
Trigger: CCCCACCTCCCCAGGGTCCAACAGACAAGTCATGCACAATGTAAAAACCAGCCAAGCAAGGCCATAAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp GGCAAGTTTTGTTCAGTGGTCACAACCCGTTCTCCTTaGAGAGGCAGAGTTGTACTCCCACACGCAGGCAAT +
Preference number: 6 (lower is better)
Translates to: GKFCSVVTTRSP*RGRVVLPHAGN
Trigger: ATTGCCTGCGTGTGGGAGTACAACTCTGCCTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CAA 90 bp TGGCTCACATTCATCTTCACTTGTGTGGGGCTCTGTACCAGCATCTaGGTCCACTTCCTCCAATGTACCGTGCTCACTGTATGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: WLTFIFTCVGLCTSI*VHFLQCTVLTVWAV
Trigger: GACAGCCCATACAGTGAGCACGGTACATTGGAGGAAGTGGACCAAGATGCTGGTACAGAGCCCCACACAAGTGAAGATGAATGTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS GCA 72 bp CGGCTCGGGGTGGACATTATCCAGCTGTTCCGGGTTTaGTTTCAATGGGCAAGTTTTGTTCAGTGGTCACAA +
Preference number: 6 (lower is better)
Translates to: RLGVDIIQLFRV*FQWASFVQWSQ
Trigger: TTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGATAATGTCCACCCCGAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS CCA 72 bp CCATCTTCACTTGTGTGGGGCTCTGTACCAGCATCTTaGTCCACTTCCTCCAATGTACCGTGCTCACTGTAT +
Preference number: 6 (lower is better)
Translates to: PSSLVWGSVPAS*STSSNVPCSLY
Trigger: ATACAGTGAGCACGGTACATTGGAGGAAGTGGACCAAGATGCTGGTACAGAGCCCCACACAAGTGAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537585.1
CDS CAA 72 bp TCCAGCTGTTCCGGGTTTGCTTTCAATGGGCAAGTTTaGTTCAGTGGTCACAACCCGTTCTCCTTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SSCSGFAFNGQV*FSGHNPFSLER
Trigger: CCTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CAA 72 bp TCGGCTCGGGGTGGACATTATCCAGCTGTTCCGGGTTaGCTTTCAATGGGCAAGTTTTGTTCAGTGGTCACA +
Preference number: 6 (lower is better)
Translates to: SARGGHYPAVPG*LSMGKFCSVVT
Trigger: TGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGATAATGTCCACCCCGAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355086.8
ENST00000631006.2
CDS CAA 90 bp CTTCTTGAATCGGCTCGGGGTGGACATTATCCAGCTGTTCCGGGTTaGCTTTCAATGGGCAAGTTTTGTTCAGTGGTCACAACCCGTTCT +
Preference number: 6 (lower is better)
Translates to: LLESARGGHYPAVPG*LSMGKFCSVVTTRS
Trigger: AGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGATAATGTCCACCCCGAGCCGATTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 72 bp TTCCGGGTTTGCTTTCAATGGGCAAGTTTTGTTCAGTaGTCACAACCCGTTCTCCTTGGAGAGGCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: FRVCFQWASFVQ*SQPVLLGEAEL
Trigger: CAACTCTGCCTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CCA 72 bp CACATGTGCCTGGCAAGACACTTGATCCTGTATTTCTaGGACAGGCATCAATGTTGGGCCAAAGCAAATGGC +
Preference number: 6 (lower is better)
Translates to: HMCLARHLILYF*DRHQCWAKANG
Trigger: GCCATTTGCTTTGGCCCAACATTGATGCCTGTCCCAGAAATACAGGATCAAGTGTCTTGCCAGGCACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp TCATCTTCACTTGTGTGGGGCTCTGTACCAGCATCTTaGTCCACTTCCTCCAATGTACCGTGCTCACTGTAT +
Preference number: 6 (lower is better)
Translates to: SSSLVWGSVPAS*STSSNVPCSLY
Trigger: ATACAGTGAGCACGGTACATTGGAGGAAGTGGACCAAGATGCTGGTACAGAGCCCCACACAAGTGAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp TATGGTAGGATTTGTTTTTGGAAGAACAGCAGGTTTTaGCCTAAGGGCTGGAGGCTTCAGCTGCACGCCCAT +
Preference number: 6 (lower is better)
Translates to: YGRICFWKNSRF*PKGWRLQLHAH
Trigger: ATGGGCGTGCAGCTGAAGCCTCCAGCCCTTAGGCCAAAACCTGCTGTTCTTCCAAAAACAAATCCTACCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CAA 90 bp TGGACATTATCCAGCTGTTCCGGGTTTGCTTTCAATGGGCAAGTTTaGTTCAGTGGTCACAACCCGTTCTCCTTGGAGAGGCAGAGTTGT +
Preference number: 6 (lower is better)
Translates to: WTLSSCSGFAFNGQV*FSGHNPFSLERQSC
Trigger: ACAACTCTGCCTCTCCAAGGAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGATAATGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS TCA 72 bp TTTCCAGACTTTTCTACGATCAGGAGCACCACACTCTaGAGATCCCTCCCTAGGAGCTCGGTATTGACTTTC +
Preference number: 6 (lower is better)
Translates to: FPDFSTIRSTTL*RSLPRSSVLTF
Trigger: GAAAGTCAATACCGAGCTCCTAGGGAGGGATCTTCAGAGTGTGGTGCTCCTGATCGTAGAAAAGTCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537556.1
CDS CCA 72 bp GTGGACATTATCCAGCTGTTCCGGGTTTGCTTTCAATaGGCAAGTTTTGTTCAGTGGTCACAACCCGTTCTC +
Preference number: 6 (lower is better)
Translates to: VDIIQLFRVCFQ*ASFVQWSQPVL
Trigger: GAGAACGGGTTGTGACCACTGAACAAAACTTGCCCATTGAAAGCAAACCCGGAACAGCTGGATAATGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355086.8
CDS CAA 72 bp GCTTCAGTCGTTTTCTTAACCTCTTCATTCTCGATTTaGAGCGTGGCAAGGCGGGACTGCAACTGTTGGTAC +
Preference number: 6 (lower is better)
Translates to: ASVVFLTSSFSI*SVARRDCNCWY
Trigger: GTACCAACAGTTGCAGTCCCGCCTTGCCACGCTCAAAATCGAGAATGAAGAGGTTAAGAAAACGACTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS TCA 72 bp TCATTGGTGGACAGAACGCAGCAGGGTACATCTCCATaGATCTCTGCTTATCGCTCCTGGGCTCTAAATTAT +
Preference number: 6 (lower is better)
Translates to: SLVDRTQQGTSP*ISAYRSWALNY
Trigger: ATAATTTAGAGCCCAGGAGCGATAAGCAGAGATTCATGGAGATGTACCCTGCTGCGTTCTGTCCACCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS TCA 72 bp GCTGGAAGCATTCAGAAACATCATAGTCCTCGATGGTaGCCATATCTTGTATCGTCTGCAAGGTGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: AGSIQKHHSPRW*PYLVSSARWLQ
Trigger: CTGAAGCCACCTTGCAGACGATACAAGATATGGTCACCATCGAGGACTATGATGTTTCTGAATGCTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS TCA 72 bp CAGCCCACGGAAATAGAGCTTCAGAACGCCAGCAACTaGGTTAATATCATGGTTACTCTGGTCATCAGCCAA +
Preference number: 6 (lower is better)
Translates to: QPTEIELQNASN*VNIMVTLVISQ
Trigger: TTGGCTGATGACCAGAGTAACCATGATATTAACTCAGTTGCTGGCGTTCTGAAGCTCTATTTCCGTGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS TCA 72 bp GCTGGCCTCACTGTCGGCTTTTTGGCTCAGAGTGTCTaGAAACGTATCATCCATATCCTGCACCACTATATA +
Preference number: 6 (lower is better)
Translates to: AGLTVGFLAQSV*KRIIHILHHYI
Trigger: TATATAGTGGTGCAGGATATGGATGATACGTTTTCAGACACTCTGAGCCAAAAAGCCGACAGTGAGGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355086.8
ENST00000543397.1
ENST00000631006.2
CDS CAA 72 bp ATAATGTCTAAGCCCTCATGTCTGGAGGTTTCAAGGTaGTACTCCGCAGACAGATATGTTCTTAGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: IMSKPSCLEVSR*YSADRYVLRAL
Trigger: CAGAGCCCTAAGAACATATCTGTCTGCGGAGTACAACCTTGAAACCTCCAGACATGAGGGCTTAGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS CAA 90 bp GCATTCTCAATAATGTCTAAGCCCTCATGTCTGGAGGTTTCAAGGTaGTACTCCGCAGACAGATATGTTCTTAGGGCTCTGTTCAGACTT +
Preference number: 6 (lower is better)
Translates to: AFSIMSKPSCLEVSR*YSADRYVLRALFRL
Trigger: AAGTCTGAACAGAGCCCTAAGAACATATCTGTCTGCGGAGTACAACCTTGAAACCTCCAGACATGAGGGCTTAGACATTATTGAGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS CAA 90 bp CTGGAAGCATTCAGAAACATCATAGTCCTCGATGGTGACCATATCTaGTATCGTCTGCAAGGTGGCTTCAGTCGTTTTCTTAACCTCTTC +
Preference number: 6 (lower is better)
Translates to: LEAFRNIIVLDGDHI*YRLQGGFSRFLNLF
Trigger: GAAGAGGTTAAGAAAACGACTGAAGCCACCTTGCAGACGATACAAGATATGGTCACCATCGAGGACTATGATGTTTCTGAATGCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS GCA 72 bp CGAATATGGAAGACTGGATCACCAGATCTCCCAATTTaGTTTTCCTCTTGTTTTTCGGCCTCTTTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RIWKTGSPDLPI*FSSCFSASFSL
Trigger: CAAGCTGAAAGAGGCCGAAAAACAAGAGGAAAAGCAAATTGGGAGATCTGGTGATCCAGTCTTCCATATTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000542381.1
ENST00000543397.1
ENST00000631006.2
CDS CCA 72 bp CCTTACTTGGTTCAGGAGCAAATACCAGCAGTTCACTaGAGACAACAGGTTCTGGTCTTTCTTGTATTGTTG +
Preference number: 6 (lower is better)
Translates to: PYLVQEQIPAVH*RQQVLVFLVLL
Trigger: CAACAATACAAGAAAGACCAGAACCTGTTGTCTCCAGTGAACTGCTGGTATTTGCTCCTGAACCAAGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS GCA 72 bp CCTAGATTTCACTACGCTTCCTCAAGGTTAGCACCATaGTTTAGAAGAAAATCGTGCCAGGAGAACTTAATC +
Preference number: 6 (lower is better)
Translates to: PRFHYASSRLAP*FRRKSCQENLI
Trigger: GATTAAGTTCTCCTGGCACGATTTTCTTCTAAAGCATGGTGCTAACCTTGAGGAAGCGTAGTGAAATCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537556.1
CDS GCA 72 bp TATCCCCTTCATGTAGATTTTCCGGCTGTTAATGTTTaGCACATTGACTGTACCTTCTTTCTCTCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: YPLHVDFPAVNV*HIDCTFFLSPS
Trigger: AGAGGGAGAGAGAAAGAAGGTACAGTCAATGTGGCAAACATTAACAGCCGGAAAATCTACATGAAGGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537556.1
CDS CAA 72 bp TCGAATATGGAAGACTGGATCACCAGATCTCCCAATTaGCTTTTCCTCTTGTTTTTCGGCCTCTTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: SNMEDWITRSPN*LFLLFFGLFQL
Trigger: AAGCTGAAAGAGGCCGAAAAACAAGAGGAAAAGCAAATTGGGAGATCTGGTGATCCAGTCTTCCATATTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000542381.1
ENST00000543397.1
ENST00000631006.2
CDS CAA 72 bp TTCAGAAACATCATAGTCCTCGATGGTGACCATATCTaGTATCGTCTGCAAGGTGGCTTCAGTCGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: FRNIIVLDGDHI*YRLQGGFSRFL
Trigger: AAGAAAACGACTGAAGCCACCTTGCAGACGATACAAGATATGGTCACCATCGAGGACTATGATGTTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355086.8
ENST00000537556.1
ENST00000543397.1
ENST00000631006.2
CDS TCA 72 bp AATGGCAAAGAAATAAGCATCATTTCTTCCAGGCTCTaGACCATTACACATTTGCCATTTGGCACATACAGA +
Preference number: 6 (lower is better)
Translates to: NGKEISIISSRL*TITHLPFGTYR
Trigger: TCTGTATGTGCCAAATGGCAAATGTGTAATGGTTCAGAGCCTGGAAGAAATGATGCTTATTTCTTTGCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543397.1
CDS CCA 72 bp TTCTTCCAGGCTCTGAACCATTACACATTTGCCATTTaGCACATACAGAGACTGACATCTGGTAATTTTTAT +
Preference number: 6 (lower is better)
Translates to: FFQALNHYTFAI*HIQRLTSGNFY
Trigger: ATAAAAATTACCAGATGTCAGTCTCTGTATGTGCCAAATGGCAAATGTGTAATGGTTCAGAGCCTGGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543397.1