Pregenerated sensors for SRFBP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000151304Ensembl transcript IDs: ENST00000339397.5, ENST00000504881.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATTCTCCCCAAGAGACTTATTCAAATACGAGTTTAAGTAATAGCTaGAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACC | + |
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Preference number: 1 (lower is better) Translates to: NSPQETYSNTSLSNS*RAWGEKAGHGSACT Trigger: GGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGCAGCTATTACTTAAACTCGTATTTGAATAAGTCTCTTGGGGAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR CCA 90 bp | CAGATGGCCTTCCCTGCCATTAAAGGAACTAATGTGCAGGAAACATaGATTAGCATTATTCAGTTTACCAAGAACTTCAAAATTTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: QMAFPAIKGTNVQET*ISIIQFTKNFKIFP Trigger: GGGAAAAATTTTGAAGTTCTTGGTAAACTGAATAATGCTAATCCATGTTTCCTGCACATTAGTTCCTTTAATGGCAGGGAAGGCCATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR-3UTR TCA 90 bp | CTCTTGAGAGTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGAGTTTGAGGCTGCAGTaGGCTGTGATTGCAATATTG | + |
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Preference number: 2 (lower is better) Translates to: LLRVCEYRLTRWPSLPLKSLRLQ*AVIAIL Trigger: CAATATTGCAATCACAGCTCACTGCAGCCTCAAACT...CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR-3UTR TCA 90 bp | CTCTTGAGAGTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGAGGAAACAACAGAGCTaGACCAGTGAAGCACATTTC | + |
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Preference number: 2 (lower is better) Translates to: LLRVCEYRLTRWPSLPLKRKQQS*TSEAHF Trigger: GAAATGTGCTTCACTGGTTCAGCTCTGTTGTTTCCT...CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGCAGTCCCTTCCTCAGTaGGTCATCTTACAACTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VCEYRLTRWPSLPLKELMQSLPQ*VILQLL Trigger: AAGAAGTTGTAAGATGACTCACTGAGGAAGGGACTG...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGACAGAGCTGAACCAGTaGAGCACATTTCATGATAAG | + |
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Preference number: 2 (lower is better) Translates to: VCEYRLTRWPSLPLKELMTELNQ*STFHDK Trigger: CTTATCATGAAATGTGCTTCACTGGTTCAGCTCTGT...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR CAA 90 bp | ATGTATAAAGCAGTCCCTTCCTCAGTGAGTCATCTTACAACTTCTTaGCTTAGCCATCAGTGGAAATATTCTTTTAATCCTACCACCTTC | + |
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Preference number: 2 (lower is better) Translates to: MYKAVPSSVSHLTTS*LSHQWKYSFNPTTF Trigger: GAAGGTGGTAGGATTAAAAGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGAAGGGACTGCTTTATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR-3UTR CAA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCTGTGATTGCAATATaGTACTCTAGTCTGGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPAVIAI*YSSLGN Trigger: GTTGCCCAGACTAGAGTACAATATTGCAATCACAGC...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR GCA 72 bp | CAAGAGACTTATTCAAATACGAGTTTAAGTAATAGCTaGAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: QETYSNTSLSNS*RAWGEKAGHGS Trigger: ACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGCAGCTATTACTTAAACTCGTATTTGAATAAGTCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR CCA 72 bp | AAACTCTTGAGAGTTTGTGAATACAGGTTAACCAGATaGCCTTCCCTGCCATTAAAGGAACTAATGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KLLRVCEYRLTR*PSLPLKELMCR Trigger: CCTGCACATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| 3UTR CCA 72 bp | TTCCCTGCCATTAAAGGAACTAATGTGCAGGAAACATaGATTAGCATTATTCAGTTTACCAAGAACTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: FPAIKGTNVQET*ISIIQFTKNFK Trigger: TTTGAAGTTCTTGGTAAACTGAATAATGCTAATCCATGTTTCCTGCACATTAGTTCCTTTAATGGCAGGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | GCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCCCTGCAGTCCCAGCCCTTTaGGAGGCAGAGGTGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: AWGEKAGHGSACTCSPSPAVPAL*EAEVGG Trigger: TCCTCCCACCTCTGCCTCCCAAAGGGCTGGGACTGC...AGGGCTGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGTAGATGAAGGAATATaGTCCGCCGCTGCCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPVDEGI*SAAACT Trigger: CGTGCAGGCAGCGGCGGATCATATTCCTTCATCTAC...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | GCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCCCTCTGAGCCATGGTAGATaGAGGAATATGATCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AWGEKAGHGSACTCSPSPLSHGR*RNMIRR Trigger: GCGGCGGATCATATTCCTTCATCTACCATGGCTCAG...AGGGCTGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAAATATGATCCGCCGCTaGCTGCACGTGAACCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPNMIRR*LHVNRS Trigger: AGACCGGTTCACGTGCAGGCAGCGGCGGATCATATT...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAAGCCTTCTGAGTAGCTaGAATTACAGATGCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPSLLSS*NYRCRP Trigger: TGGCCGGCATCTGTAATTCCAGCTACTCAGAAGGCT...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCACAGTCCCTTCCTCAGTaGGTCATCTTACAACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPQSLPQ*VILQLL Trigger: AAGAAGTTGTAAGATGACTCACTGAGGAAGGGACTG...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | GCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCCCTTTCAAGCAATTCTTATaGCTCAGCCTTCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: AWGEKAGHGSACTCSPSPFKQFL*LSLLSS Trigger: GCTACTCAGAAGGCTGAGGCATAAGAATTGCTTGAA...AGGGCTGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCATACAGGTTAACCAGATaGCCTTCCCTGCCATTAAAG | + |
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Preference number: 4 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPYRLTR*PSLPLK Trigger: CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTA...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAAGTTTAAGTAATAGCTaGAGAGCCTGGGGTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPSLSNS*RAWGEK Trigger: TTTCTCACCCCAGGCTCTGCAGCTATTACTTAAACT...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | GCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCCCTCACTATCTTCAGACATaGAAGACTGCTTGTAAAACC | + |
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Preference number: 4 (lower is better) Translates to: AWGEKAGHGSACTCSPSPHYLQT*KTACKT Trigger: GGTTTTACAAGCAGTCTTCCATGTCTGAAGATAGTG...AGGGCTGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | GCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCCCTAAAGTATTCTCAGAATaGTTGTCCTCTGAAGCATTC | + |
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Preference number: 4 (lower is better) Translates to: AWGEKAGHGSACTCSPSPKVFSE*LSSEAF Trigger: GAATGCTTCAGAGGACAATCATTCTGAGAATACTTT...AGGGCTGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAACTCTTGAGAGTTTGTaGATACAGGTTAACCAGATG | + |
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Preference number: 4 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPTLESL*IQVNQM Trigger: CATCTGGTTAACCTGTATTCACAAACTCTCAAGAGT...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | GCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCCCTGTTTCAATTCCTTCATaGCATGGATTTCTTCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: AWGEKAGHGSACTCSPSPVSIPS*HGFLQA Trigger: TGCTTGAAGAAATCCATGCCATGAAGGAATTGAAAC...AGGGCTGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTGCCGCTGCCTGCACGTaGACCGGTCTCTCAGACCGC | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSAAACT*TGLSDR Trigger: GCGGTCTGAGAGACCGGTTCACGTGCAGGCAGCGGC...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | GCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCCCTAATTGCTCTTTCAGTTaGAGTAGAATCTGGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: AWGEKAGHGSACTCSPSPNCSFS*SRIWLF Trigger: AAAAAGCCAGATTCTACTGCAACTGAAAGAGCAATT...AGGGCTGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAACAGCAATATTAGATTaGTGTTCTTTTCGCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPTAILD*CSFRLL Trigger: CAGAAGGCGAAAAGAACAGCAATCTAATATTGCTGT...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | CTCTTGAGAGTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGTCACAACCTCGTTATTaGGGTTCAGAGTTCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLRVCEYRLTRWPSLPLKSQPRY*GSEFPA Trigger: AGCCGGGAACTCTGAACCTCAATAACGAGGTTGTGA...CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGAATAGCTGCAGAGCCTaGGGTGAGAAAGCTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VCEYRLTRWPSLPLKELMNSCRA*GEKAGH Trigger: ATGCCCAGCTTTCTCACCCCAGGCTCTGCAGCTATT...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | CTCTTGAGAGTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGTCAGCAGGTGTCTTCTaGGACTCAAGGGAAACTACA | + |
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Preference number: 4 (lower is better) Translates to: LLRVCEYRLTRWPSLPLKSAGVF*DSRETT Trigger: TGTAGTTTCCCTTGAGTCCCAGAAGACACCTGCTGA...CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTTTCAGAGTTCCCGGCTaGGCCATGGTAGATGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSFRVPG*AMVDEG Trigger: TCCTTCATCTACCATGGCTCAGCCGGGAACTCTGAA...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTTCTGCTTGCTTCCCATaGAGGATGAAGAGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSSACFP*RMKRQL Trigger: CAGCTGCCTCTTCATCCTTCATGGGAAGCAAGCAGA...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGAGTTTGAGGCTGCAGTaGGCTGTGATTGCAATATTG | + |
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Preference number: 4 (lower is better) Translates to: VCEYRLTRWPSLPLKELMSLRLQ*AVIAIL Trigger: CAATATTGCAATCACAGCTCACTGCAGCCTCAAACT...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGGTTCTTTTCGCCTTCTaGTTGCTTCCCATGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: VCEYRLTRWPSLPLKELMVLFAF*LLPMKD Trigger: ATCCTTCATGGGAAGCAAGCAGAAGGCGAAAAGAAC...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGGCCGGCCACCACGCCTaGATAATTTTCTGTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: VCEYRLTRWPSLPLKELMAGHHA*IIFCIF Trigger: AAAAATACAGAAAATTATCCAGGCGTGGTGGCCGGC...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTAGGAAACAACAGAGCTaGACCAGTGAAGCACATTTC | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSRKQQS*TSEAHF Trigger: GAAATGTGCTTCACTGGTTCAGCTCTGTTGTTTCCT...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTACTGTTACCAGAGAGTaGGCTATCAGATCCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSTVTRE*AIRSFV Trigger: AACAAAGGATCTGATAGCTCACTCTCTGGTAACAGT...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTACAGAGCTGAACCAGTaGAGCACATTTCATGATAAG | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSTELNQ*STFHDK Trigger: CTTATCATGAAATGTGCTTCACTGGTTCAGCTCTGT...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | CTCTTGAGAGTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGTTAAAGGAACTAATGTaGAGGAAACATGGATTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLRVCEYRLTRWPSLPLKLKELM*RKHGLA Trigger: TGCTAATCCATGTTTCCTGCACATTAGTTCCTTTAA...CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTGATGTACTGCTAGTCTaGCAATTGCTCTTTCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSDVLLV*QLLFQL Trigger: CAACTGAAAGAGCAATTGCCAGACTAGCAGTACATC...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR TCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTTTTCTTGTATCCCCATaGGTTTCACCTGTATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSFLVSP*VSPVSS Trigger: AGAAGATACAGGTGAAACTCATGGGGATACAAGAAA...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGTCTGGTTTCTGTACTTaGCTTGATTTTGTCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: VCEYRLTRWPSLPLKELMSGFCT*LDFVIS Trigger: AGAAATGACAAAATCAAGCCAAGTACAGAAACCAGA...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTATTTGCAATAGTCACTaGTTTAGGTCCATGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSICNSH*FRSMFH Trigger: ATGGAACATGGACCTAAAGCAGTGACTATTGCAAAT...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR GCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTAGAGGCAGCTGCAATTaGTGTTTTGTATTTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSRGSCN*CFVFSS Trigger: ACTTGAAAATACAAAACAGCAATTGCAGCTGCCTCT...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CCA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTGATCCAGATAAAGAGTaGAAAAACACTGATTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSDPDKE*KNTDSN Trigger: GTTAGAATCAGTGTTTTTCCACTCTTTATCTGGATC...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCACTTCAGTACCCTTTTTaGACTTCAGTCGGCCAACAC | + |
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Preference number: 5 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPLQYPF*TSVGQH Trigger: GTGTTGGCCGACTGAAGTCAAAAAAGGGTACTGAAG...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCACTTTTCGCCTTCTGCTaGCTTCCCATGAAGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPLFAFC*LPMKDE Trigger: TTCATCCTTCATGGGAAGCAAGCAGAAGGCGAAAAG...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | GCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGCCCTGCTGTGATTGCAATATaGTACTCTAGTCTGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: AWGEKAGHGSACTCSPSPAVIAI*YSSLGN Trigger: GTTGCCCAGACTAGAGTACAATATTGCAATCACAGC...AGGGCTGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS TCA 90 bp | AACCTCGTTATTGAGGTTCAGAGTTCCCGGCTGAGCCATGGTAGATaGAGGAATATGATCCGCCGCTGCCTGCACGTGAACCGGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: NLVIEVQSSRLSHGR*RNMIRRCLHVNRSL Trigger: GAGAGACCGGTTCACGTGCAGGCAGCGGCGGATCATATTCCTTCATCTACCATGGCTCAGCCGGGAACTCTGAACCTCAATAACGAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCATTCTTCAAGCAATCTTaGCGCCCGTCTTTGGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPFFKQS*RPSLVF Trigger: AAAAACCAAAGACGGGCGCAAAGATTGCTTGAAGAA...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCATTAGAGTTTTCAGTTTaGGGTCAGCAGGTGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPLEFSV*GQQVSS Trigger: AGAAGACACCTGCTGACCCAAAACTGAAAACTCTAA...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCTGGGGTGAGAAAGCTGGGCATGGTAGTGCATGCACCTGCAGTCCCAGAAAATCTAGGGATCTaGTTTTTGGAGCCTGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: AEPGVRKLGMVVHAPAVPENLGI*FLEPVL Trigger: AAGAACAGGCTCCAAAAACAAGATCCCTAGATTTTC...TGGGACTGCAGGTGCATGCACTACCATGCCCAGCTTTCTCACCCCAGGCTCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | CTCTTGAGAGTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGTTCACAACCTCGTTATaGAGGTTCAGAGTTCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: LLRVCEYRLTRWPSLPLKFTTSL*RFRVPG Trigger: GCCGGGAACTCTGAACCTCAATAACGAGGTTGTGAA...CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGCCTCTGAAGCATTCTTaGATGACTCAACTTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: VCEYRLTRWPSLPLKELMPLKHS*MTQLQQ Trigger: TTGCTGAAGTTGAGTCATCAAAGAATGCTTCAGAGG...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | CTCTTGAGAGTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGTACTTGGCTTGATTTaGTCATTTCTTGTATCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LLRVCEYRLTRWPSLPLKVLGLI*SFLVSP Trigger: TGGGGATACAAGAAATGACAAAATCAAGCCAAGTAC...CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | CTCTTGAGAGTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGCATCTTACAACTTCTTaGCTTAGCCATCAGTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LLRVCEYRLTRWPSLPLKHLTTS*LSHQWK Trigger: TTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATG...CTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAACTCTCAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | GTTTGTGAATACAGGTTAACCAGATGGCCTTCCCTGCCATTAAAGGAACTAATGCACAGCAATATTAGATaGCTGTTCTTTTCGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VCEYRLTRWPSLPLKELMHSNIR*LFFSPS Trigger: AGAAGGCGAAAAGAACAGCAATCTAATATTGCTGTG...CATTAGTTCCTTTAATGGCAGGGAAGGCCATCTGGTTAACCTGTATTCACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTAACTTCAGCAACATTTaGTCTTGCTTCTTTAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSNFSNI*SCFFKG Trigger: GCCTTTAAAGAAGCAAGACAAAATGTTGCTGAAGTT...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS-3UTR CAA 90 bp | TCCTCAGTGAGTCATCTTACAACTTCTTTGCTTAGCCATCAGTGGAAATATTCTTTTAGATGGAAAAGTTaGCAGAAAGAGGCACTAATC | + |
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Preference number: 5 (lower is better) Translates to: SSVSHLTTSLLSHQWKYSFRWKS*QKEALI Trigger: GATTAGTGCCTCTTTCTGCAAACTTTTCCATCTAAA...AGAATATTTCCACTGATGGCTAAGCAAAGAAGTTGTAAGATGACTCACTGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS TCA 72 bp | ATTGAGGTTCAGAGTTCCCGGCTGAGCCATGGTAGATaGAGGAATATGATCCGCCGCTGCCTGCACGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: IEVQSSRLSHGR*RNMIRRCLHVN Trigger: GTTCACGTGCAGGCAGCGGCGGATCATATTCCTTCATCTACCATGGCTCAGCCGGGAACTCTGAACCTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS CAA 72 bp | ACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTaGTCATCAGTAAGTAAATGGGCCTCCTGGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: TQPTKIFLGMAQ*SSVSKWASWVL Trigger: AAGTACCCAGGAGGCCCATTTACTTACTGATGACAACTGTGCCATTCCCAGGAATATCTTGGTCGGCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504881.1 |
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| CDS CAA 90 bp | AGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTaGTCATCAGTAAGTAAATGGGCCTCCTGGGTACTTTTGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RFLTQPTKIFLGMAQ*SSVSKWASWVLLGC Trigger: GCAACCCAAAAGTACCCAGGAGGCCCATTTACTTACTGATGACAACTGTGCCATTCCCAGGAATATCTTGGTCGGCTGGGTAAGAAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504881.1 |
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| CDS CCA 72 bp | TTCCTGGGAATGGCACAGTTGTCATCAGTAAGTAAATaGGCCTCCTGGGTACTTTTGGGTTGCTTTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: FLGMAQLSSVSK*ASWVLLGCFSF Trigger: AAATGAAAAGCAACCCAAAAGTACCCAGGAGGCCCATTTACTTACTGATGACAACTGTGCCATTCCCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504881.1 |
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| CDS CAA 72 bp | AAGTATTCTCAGAATGATTGTCCTCTGAAGCATTCTTaGATGACTCAACTTCAGCAACATTTTGTCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KYSQNDCPLKHS*MTQLQQHFVLL Trigger: AAGCAAGACAAAATGTTGCTGAAGTTGAGTCATCAAAGAATGCTTCAGAGGACAATCATTCTGAGAATACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339397.5 |
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| CDS TCA 72 bp | GTACTTGGCTTGATTTTGTCATTTCTTGTATCCCCATaGGTTTCACCTGTATCTTCTTTAAGAAACACTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLGLILSFLVSP*VSPVSSLRNTF Trigger: AAAAGTGTTTCTTAAAGAAGATACAGGTGAAACTCATGGGGATACAAGAAATGACAAAATCAAGCCAAGTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339397.5 ENST00000504881.1 |
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