RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SREBF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198911

Ensembl transcript IDs: ENST00000361204.9, ENST00000424354.5, ENST00000435061.1, ENST00000462539.1, ENST00000463741.1, ENST00000464119.1, ENST00000490262.1, ENST00000491541.1, ENST00000612482.4

Found 1012 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCTCCAGGGTaGGGGCAGCTTCGGCCAGCAGCACTGCCCGCTGGCCCGGGGAGG +
Preference number: 1 (lower is better)
Translates to: AGSRCRSAGRPPSPG*GQLRPAALPAGPGR
Trigger: CCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCGAAGCTGCCCGCACCCTGGAGAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp GGCAGGTGGCGGCAGGCCAGCAGGATGGCGGTGGCCCGCTCTCGCTaGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCTCTGCGTG +
Preference number: 1 (lower is better)
Translates to: GRWRQASRMAVARSR*PGQASTSPCLVLCV
Trigger: CACGCAGAGCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCGCCATCCTGCTGGCCTGCCGCCACCTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp AGAGGAAGGAGAGGGGCAGGTGGCGGCAGGCCAGCAGGATGGCGGTaGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCT +
Preference number: 1 (lower is better)
Translates to: RGRRGAGGGRPAGWR*PALAGRARHPPLRA
Trigger: AGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCGCCATCCTGCTGGCCTGCCGCCACCTGCCCCTCTCCTTCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp TGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTaGGGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGA +
Preference number: 1 (lower is better)
Translates to: WCAAAGCVPAAGGCG*GWLLPSGARWLHAG
Trigger: TCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp GCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGGGCTaGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCT +
Preference number: 1 (lower is better)
Translates to: AAAGCVPAAGGCGWG*LLPSGARWLHAGTP
Trigger: AGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp GGCTTGGCAGCTTGGGAGCTCCCCCTGCTGCTATCAAGTCAGGGCTaGCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCACCAGGC +
Preference number: 1 (lower is better)
Translates to: GLAAWELPLLLSSQG*PVSALPPILSRPPG
Trigger: GCCTGGTGGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp CAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTaGCCTGTTTTTGCCAGAGCGCTGTCCGTAGCGACAGTAGCAGGT +
Preference number: 1 (lower is better)
Translates to: QRLTRGRSPPQPGWH*PVFARALSVATVAG
Trigger: ACCTGCTACTGTCGCTACGGACAGCGCTCTGGCAAAAACAGGCCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR TCA 90 bp TGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGAAGCCTCGGCAGGTaGCAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGA +
Preference number: 1 (lower is better)
Translates to: CPGVHWPEWPRSLGR*QLRRQGSSPPLSAG
Trigger: TCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTGCCGAGGCTTCTGGGCCACTCAGGCCAGTGCACCCCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp AGCTCCCCCTGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTaGCACCTATCCTCTCACGCCCACCAGGCCCTGGACCATGGGCAT +
Preference number: 1 (lower is better)
Translates to: SSPCCYQVRAAQFLP*HLSSHAHQALDHGH
Trigger: ATGCCCATGGTCCAGGGCCTGGTGGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCAGGGGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp TTGGGAGCTCCCCCTGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTaGCCTGCCACCTATCCTCTCACGCCCACCAGGCCCTGGACCATG +
Preference number: 1 (lower is better)
Translates to: LGAPPAAIKSGLPSF*PATYPLTPTRPWTM
Trigger: CATGGTCCAGGGCCTGGTGGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp CAGGAGGCGGCAATGGCAGTGCCACCACCCAGCTTAACAATCATCTaGTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: QEAAMAVPPPSLTII*WQSLQERRSPTFSR
Trigger: CCTGGAGAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGTGGTGGCACTGCCATTGCCGCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp TCTGCCCTGCCACCTATCCTCTCACGCCCACCAGGCCCTGGACCATaGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTG +
Preference number: 1 (lower is better)
Translates to: SALPPILSRPPGPGP*ASSDSSFKGLCPGV
Trigger: CACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCCATGGTCCAGGGCCTGGTGGGCGTGAGAGGATAGGTGGCAGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp GCAGGGTCAGAGGTGGCCCCACTGACGTTGAGGCTGCTCCATAGGTaGCCACTGGCCCTCTCGCAATGGCAGAAGGAACTCTGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: AGSEVAPLTLRLLHR*PLALSQWQKELCCP
Trigger: TGGGCAGCAGAGTTCCTTCTGCCATTGCGAGAGGGCCAGTGGCCACCTATGGAGCAGCCTCAACGTCAGTGGGGCCACCTCTGACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp GAGGCGGCAATGGCAGTGCCACCACCCAGCTTAACAATCATCTGCTaGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCTCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: EAAMAVPPPSLTIIC*QSLQERRSPTFSRV
Trigger: CACCCTGGAGAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGTGGTGGCACTGCCATTGCCGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp TTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTaGCAGAGCCAGCGCAGGGAGTCAGGAACAGCACTGTGCTCGGGG +
Preference number: 1 (lower is better)
Translates to: FTDQLRSMKNFWPRG*QSQRRESGTALCSG
Trigger: CCCCGAGCACAGTGCTGTTCCTGACTCCCTGCGCTGGCTCTGCCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR TCA 90 bp GGAAGTAGCTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTaGGCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCG +
Preference number: 1 (lower is better)
Translates to: GSSWPGSPACLHTGS*APWQQSDGSQPVCS
Trigger: CGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAGCTACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp CACAGCTGCATCGTCTCCCTGGAGCCAGCTGATGGCCACAGTGATTaGAGACGTCCACCACCGACAGATGATGTCTGGACCCAGGGCGGA +
Preference number: 1 (lower is better)
Translates to: HSCIVSLEPADGHSD*RRPPPTDDVWTQGG
Trigger: TCCGCCCTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATCAGCTGGCTCCAGGGAGACGATGCAGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp CCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATaGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: PSAFPGSEACMALQA*KMAFTRGLSVTSRA
Trigger: GGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR GCA 90 bp CAGAAGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATaGATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTC +
Preference number: 1 (lower is better)
Translates to: QKELCCPSAFPGSEA*MALQAWKMAFTRGL
Trigger: GAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp CTCCATAGGTGGCCACTGGCCCTCTCGCAATGGCAGAAGGAACTCTaGTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTG +
Preference number: 1 (lower is better)
Translates to: LHRWPLALSQWQKEL*CPSAFPGSEACMAL
Trigger: CAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCTTCTGCCATTGCGAGAGGGCCAGTGGCCACCTATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp ACCAAGGACTCTATAGCTCGCTCCAGCAGGTTCTTGCAGAAGGCCTaGTGGACCTGCGCAATGGGGTCAGCTGGGTTCCTCTGGGCACAG +
Preference number: 1 (lower is better)
Translates to: TKDSIARSSRFLQKA*WTCAMGSAGFLWAQ
Trigger: CTGTGCCCAGAGGAACCCAGCTGACCCCATTGCGCAGGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGCGAGCTATAGAGTCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATaGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTC +
Preference number: 1 (lower is better)
Translates to: RNSAAHLLSQGVRHA*LCRHGRWPSPGGSF
Trigger: GAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR CCA 90 bp CTGACGTTGAGGCTGCTCCATAGGTGGCCACTGGCCCTCTCGCAATaGCAGAAGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAG +
Preference number: 1 (lower is better)
Translates to: LTLRLLHRWPLALSQ*QKELCCPSAFPGSE
Trigger: CTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCTTCTGCCATTGCGAGAGGGCCAGTGGCCACCTATGGAGCAGCCTCAACGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATaGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTG +
Preference number: 1 (lower is better)
Translates to: RNSAAHLLSQGVRHA*LCRHGRWPSPGGSL
Trigger: CAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR GCA 90 bp TCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTaGAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTT +
Preference number: 1 (lower is better)
Translates to: SAAHLLSQGVRHAWL*RHGRWPSPGGSLSL
Trigger: AAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR TCA 90 bp TCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTTTGGTAAAATaGGAGCGCACAGCTGCATCGTCTCCCTGGAGCCAGCTGATGGCC +
Preference number: 1 (lower is better)
Translates to: SVTSRALGMRSTLVK*ERTAASSPWSQLMA
Trigger: GGCCATCAGCTGGCTCCAGGGAGACGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp TCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTaGAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAA +
Preference number: 1 (lower is better)
Translates to: SAAHLLSQGVRHAWL*RHGRWPSPGGSFIQ
Trigger: TTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR CCA 90 bp AGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATaGATCTCAACCAGTGTGCTCGGTGGGATCTTCTCCTCTGCACAT +
Preference number: 1 (lower is better)
Translates to: SLPPHRVLSPMAAVR*ISTSVLGGIFSSAH
Trigger: ATGTGCAGAGGAGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp GGCCTTGGGGATGCGTTCCACTTTGGTAAAATGAGAGCGCACAGCTaGATCGTCTCCCTGGAGCCAGCTGATGGCCACAGTGATTGCAGA +
Preference number: 1 (lower is better)
Translates to: GLGDAFHFGKMRAHS*IVSLEPADGHSDCR
Trigger: TCTGCAATCACTGTGGCCATCAGCTGGCTCCAGGGAGACGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGAACGCATCCCCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp CAGCCGGGGAGTCAGCAGGCAGGGCTGCCCATCACTAGTGCCGAATaGCCCCAAGACGCAGACATGAATCTCCAAAGAGGAATGTCAAAA +
Preference number: 1 (lower is better)
Translates to: QPGSQQAGLPITSAE*PQDADMNLQRGMSK
Trigger: TTTTGACATTCCTCTTTGGAGATTCATGTCTGCGTCTTGGGGGCATTCGGCACTAGTGATGGGCAGCCCTGCCTGCTGACTCCCCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR CCA 90 bp GAGCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTaGGATCTTCTCCTCTGCACATTCAGCCAGGTTCACGGCACACAA +
Preference number: 1 (lower is better)
Translates to: EPHGSSQMDLNQCAR*DLLLCTFSQVHGTQ
Trigger: TTGTGTGCCGTGAACCTGGCTGAATGTGCAGAGGAGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 90 bp CTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATaGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGTCAGAG +
Preference number: 1 (lower is better)
Translates to: LSQGVRHAWLCRHGR*PSPGGSFIQCWKSE
Trigger: CTCTGACTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR CCA 90 bp CCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATaGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAA +
Preference number: 1 (lower is better)
Translates to: PSAFPGSEACMALQA*KMAFTRGLLHSMLE
Trigger: TTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR GCA 90 bp TCAGCTCCTTCCTGTGCGCCGGTTAAGGGTCTGCTTGATAGGAAATaGTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCT +
Preference number: 1 (lower is better)
Translates to: SAPSCAPVKGLLDRK*YSLGSKDRTSWGLS
Trigger: AGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAGACCCTTAACCGGCGCACAGGAAGGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR GCA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATaGTGGAAGTCAGAGACACAGGCTTCACCATCACGTCTGCTGCTA +
Preference number: 1 (lower is better)
Translates to: CRHGRWPSPGGSFIQ*WKSETQASPSRLLL
Trigger: TAGCAGCAGACGTGATGGTGAAGCCTGTGTCTCTGACTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR TCA 90 bp CAGGGCTGCCCATCACTAGTGCCGAATGCCCCCAAGACGCAGACATaGATCTCCAAAGAGGAATGTCAAAAGCTCTCCGGTTATGCCATG +
Preference number: 1 (lower is better)
Translates to: QGCPSLVPNAPKTQT*ISKEECQKLSGYAM
Trigger: CATGGCATAACCGGAGAGCTTTTGACATTCCTCTTTGGAGATTCATGTCTGCGTCTTGGGGGCATTCGGCACTAGTGATGGGCAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR GCA 90 bp AGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTCCTCTaGACATTCAGCCAGGTTCACGGCACACAACGCCATGTGTACATC +
Preference number: 1 (lower is better)
Translates to: SQMDLNQCARWDLLL*TFSQVHGTQRHVYI
Trigger: GATGTACACATGGCGTTGTGTGCCGTGAACCTGGCTGAATGTGCAGAGGAGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 90 bp TTTCCTTACTCTTCTCAGCTCCTTCCTGTGCGCCGGTTAAGGGTCTaGTTGATAGGAAATGCTACAGCCTTGGCTCTAAGGATAGGACCT +
Preference number: 1 (lower is better)
Translates to: FPYSSQLLPVRRLRV*LIGNATALALRIGP
Trigger: AGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAGACCCTTAACCGGCGCACAGGAAGGAGCTGAGAAGAGTAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR CCA 90 bp CTTGATAGGAAATGCTACAGCCTTGGCTCTAAGGATAGGACCTCGTaGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAATA +
Preference number: 1 (lower is better)
Translates to: LDRKCYSLGSKDRTS*GLSVLEHFTVSLRI
Trigger: TATTCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTTCCTATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR GCA 90 bp GCAGACATGAATCTCCAAAGAGGAATGTCAAAAGCTCTCCGGTTATaGCATGTGCTAAAGGCTATTTTAGTTACAGGACAAAGTTGCCAG +
Preference number: 1 (lower is better)
Translates to: ADMNLQRGMSKALRL*HVLKAILVTGQSCQ
Trigger: CTGGCAACTTTGTCCTGTAACTAAAATAGCCTTTAGCACATGGCATAACCGGAGAGCTTTTGACATTCCTCTTTGGAGATTCATGTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR TCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTGACCCAGGGCGGACTTaGGCACGGAGCTCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGDPGRT*ARSSWR
Trigger: TCTCCAGGAGCTCCGTGCTCAAGTCCGCCCTGGGTC...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGGTGGGGCTGGCTCCTaGCATCAGGCGCACGGTGGC +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSGGAGS*HQAHGG
Trigger: GCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGGAAACTCAGGAAGGCTaGAGGCAGGGGCTTGGCAGC +
Preference number: 2 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWETQEG*RQGLGS
Trigger: GCTGCCAAGCCCCTGCCTCCAGCCTTCCTGAGTTTC...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CAA 90 bp TGGACCACGTGGTTGAGGGCAGGGTCAGAGGTGGCCCCACTGACGTaGAGGCTGCTCCATAGGTGGCCACTGGCCCTCTCGCAATGGCAG +
Preference number: 2 (lower is better)
Translates to: WTTWLRAGSEVAPLT*RLLHRWPLALSQWQ
Trigger: CTGCCATTGCGAGAGGGCCAGTGGCCACCTATGGAGCAGCCTCAACGTCAGTGGGGCCACCTCTGACCCTGCCCTCAACCACGTGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCAGGGGTGCACTGGCCTaGGTGGCCCAGAAGCCTCGG +
Preference number: 2 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPRGALA*VAQKPR
Trigger: CCGAGGCTTCTGGGCCACTCAGGCCAGTGCACCCCT...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTTGCTGGGCACAGGCCTaGGGGCAACTGCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: AFTRGLSVTSRALGMRSTCWAQA*GQLLPG
Trigger: ACCAGGGAGCAGTTGCCCTCAGGCCTGTGCCCAGCA...AGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR TCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCACAGGAAGCTTCCCTGTaGTGTGCAGCTGGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAQEASL*CAAGAA
Trigger: GGCTGCACCAGCTGCACATCACAGGGAAGCTTCCTG...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTTCCACCACCGACAGATaGTGTCTGGACCCAGGGCGG +
Preference number: 2 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGSTTDR*CLDPGR
Trigger: CCGCCCTGGGTCCAGACATCATCTGTCGGTGGTGGA...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTTGGGCGGAAGCTGTGTaGCAGCCTGCGCAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSWAEAV*QPAQAA
Trigger: GGCAGCCTGCGCAGGCTGGCACACAGCTTCCGCCCA...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCCTCTCCGTGCTTGGTaGTCTGCGTGGTGCGCCGCC +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSPLRAW*SAWCAA
Trigger: GGCGGCGCACCACGCAGAGCACCAAGCACGGAGAGG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGAAATCGAGAGAGAGGTaGAGGGGTGGGCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWKSRER*RGGLSL
Trigger: CAGGCTCAGCCCACCCCTCCACCTCTCTCTCGATTT...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACTTCTGGCCCAGGGGGTaGCAGAGCCAGCGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHFWPRG*QSQRRE
Trigger: CTCCCTGCGCTGGCTCTGCCACCCCCTGGGCCAGAA...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGTGGCCCGCTCTCGCTaGCCGGGCCAGGCATCCACC +
Preference number: 2 (lower is better)
Translates to: ADPGRESRRYSNSASHHGVARSR*PGQAST
Trigger: GGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCAC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CAA 90 bp ATGGCAGTGCCACCACCCAGCTTAACAATCATCTGCTGGCAGTCGTaGCAGGAGCGCCGGTCGCCCACCTTCTCCAGGGTGCGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: MAVPPPSLTIICWQS*QERRSPTFSRVRAA
Trigger: AGCTGCCCGCACCCTGGAGAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGTGGTGGCACTGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGGATGGCCACAGTGATTaGAGACGTCCACCACCGACA +
Preference number: 2 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWDGHSD*RRPPPT
Trigger: TGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCAGCTGTGTGCCAGCCTaGGCAGGCTGCCCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: SLTIICWQSLQERRSPTFSCVPA*AGCPGP
Trigger: GGGACCTGGGCAGCCTGCGCAGGCTGGCACACAGCT...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTTGCCCAGGGGTGCACTaGCCTGAGTGGCCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSCPGVH*PEWPRS
Trigger: GCTTCTGGGCCACTCAGGCCAGTGCACCCCTGGGCA...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCGGCTCTGGGCTCGGCTaGGGAAGTAGCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCGSGLG*GSSWPG
Trigger: TCCTGGCCAGCTACTTCCTCAGCCGAGCCCAGAGCC...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTACCAGCTCCGCTCCATaGAAAACTTCTGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGTSSAP*KTSGPG
Trigger: CCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGT...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTTCCACCACCGACAGATaGTGTCTGGACCCAGGGCGG +
Preference number: 2 (lower is better)
Translates to: AGMEDGLHQGALCHFQGLSTTDR*CLDPGR
Trigger: CCGCCCTGGGTCCAGACATCATCTGTCGGTGGTGGA...AAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTAGGCCTGAGGGCAACTaGTCCCTGGTGCTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: AFTRGLSVTSRALGMRSTRPEGN*SLVLRD
Trigger: GTCTCTGAGCACCAGGGAGCAGTTGCCCTCAGGCCT...AGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCTGCCCAGGGGTGCACTaGCCTGAGTGGCCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: SLTIICWQSLQERRSPTFCPGVH*PEWPRS
Trigger: GCTTCTGGGCCACTCAGGCCAGTGCACCCCTGGGCA...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCAGCCTGCATCAAGGTaGCCCTGCTGTGAGCACCCC +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSQPASR*PCCEHP
Trigger: GGGGTGCTCACAGCAGGGCCACCTTGATGCAGGCTG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGTTCTGGCCCAGGGGGTaGCAGAGCCAGCGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQFWPRG*QSQRRE
Trigger: CTCCCTGCGCTGGCTCTGCCACCCCCTGGGCCAGAA...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAGCTGCATCGTCTCCCTaGAGCCAGCTGATGGCCACA +
Preference number: 2 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVAASSP*SQLMAT
Trigger: TGTGGCCATCAGCTGGCTCCAGGGAGACGATGCAGC...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCCCCCACAGCCTGGCTaGCACTGGCCTGTTTTTGCC +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSPPQPG*HWPVFA
Trigger: GGCAAAAACAGGCCAGTGCCAGCCAGGCTGTGGGGG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGAGGGGTGCACTGGCCTaGGTGGCCCAGAAGCCTCGG +
Preference number: 2 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMRGALA*VAQKPR
Trigger: CCGAGGCTTCTGGGCCACTCAGGCCAGTGCACCCCT...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAGGGGTGCACTGGCCTaGGTGGCCCAGAAGCCTCGG +
Preference number: 2 (lower is better)
Translates to: PGRESRRYSNSASHHGKPRGALA*VAQKPR
Trigger: CCGAGGCTTCTGGGCCACTCAGGCCAGTGCACCCCT...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCCCCTGGGCCTACCCTaGGCTTGGGCTAACATCCTA +
Preference number: 2 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHPLGLP*AWANIL
Trigger: TAGGATGTTAGCCCAAGCTCAGGGTAGGCCCAGGGG...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGGGAGCTCCCCCTGCTaGTATCAAGTCAGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEGSSPC*YQVRAA
Trigger: GGCAGCCCTGACTTGATAGCAGCAGGGGGAGCTCCC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTACTTGGGAGCTCCCCCTaGTGCTATCAAGTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVLGSSP*CYQVRA
Trigger: AGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAAG...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTAGGCCTGAGGGCAACTaGTCCCTGGTGCTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSRPEGN*SLVLRD
Trigger: GTCTCTGAGCACCAGGGAGCAGTTGCCCTCAGGCCT...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTGCCAACATTATTTCATaGATCCGCAGGCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGANIIS*IRRPAP
Trigger: GGGGGCAGGCCTGCGGATGCATGAAATAATGTTGGC...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGTGCACTGGCCTGAGTaGCCCAGAAGCCTCGGCAGG +
Preference number: 2 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHVHWPE*PRSLGR
Trigger: CCTGCCGAGGCTTCTGGGCCACTCAGGCCAGTGCAC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGGTGCACTGGCCTGAGTaGCCCAGAAGCCTCGGCAGG +
Preference number: 2 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQVHWPE*PRSLGR
Trigger: CCTGCCGAGGCTTCTGGGCCACTCAGGCCAGTGCAC...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCCAGGCCCTGGACCATaGGCATCTAGTGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSPGPGP*ASSDSS
Trigger: GCTGCTGTCACTAGATGCCCATGGTCCAGGGCCTGG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGATGGCAGCAGTCAGATaGATCTCAACCAGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWMAAVR*ISTSVL
Trigger: GAGCACACTGGTTGAGATCCATCTGACTGCTGCCAT...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGCTGGACCACGTGGTTaGGGGCAGGGTCAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMAGPRG*GQGQRW
Trigger: CCACCTCTGACCCTGCCCTCAACCACGTGGTCCAGC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGCCCAGTTTCTGCCCTaGCACCTATCCTCTCACGCC +
Preference number: 2 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWAQFLP*HLSSHA
Trigger: GGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTGGGAGCTCCCCCTaGTGCTATCAAGTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHLGSSP*CYQVRA
Trigger: AGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAAG...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGTTAGGGGTTGGTCCCTaGCATCCTGGTTTATTTATT +
Preference number: 2 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWLGVGP*HPGLFI
Trigger: AATAAATAAACCAGGATGGCAGGGACCAACCCCTAA...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCTCAGGAACAGCACTGTaGTCGGGGCCACACAGGCTC +
Preference number: 2 (lower is better)
Translates to: AFPGSEACMALQAWKMAFSGTAL*SGPHRL
Trigger: GAGCCTGTGTGGCCCCGAGCACAGTGCTGTTCCTGA...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCTCAGGAACAGCACTGTaGTCGGGGCCACACAGGCTC +
Preference number: 2 (lower is better)
Translates to: SLTIICWQSLQERRSPTFSGTAL*SGPHRL
Trigger: GAGCCTGTGTGGCCCCGAGCACAGTGCTGTTCCTGA...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTCCTCTCCGTGCTTGGTaGTCTGCGTGGTGCGCCGCC +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPPLRAW*SAWCAA
Trigger: GGCGGCGCACCACGCAGAGCACCAAGCACGGAGAGG...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTGCCCAGGGGTGCACTaGCCTGAGTGGCCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: PGRESRRYSNSASHHGKPCPGVH*PEWPRS
Trigger: GCTTCTGGGCCACTCAGGCCAGTGCACCCCTGGGCA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAGGGGCTTGGCAGCTTaGGAGCTCCCCCTGCTGCTA +
Preference number: 2 (lower is better)
Translates to: ADPGRESRRYSNSASHHGRGLAA*ELPLLL
Trigger: TAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCT...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCCCAGTCCCCATGGGTaGCTTCATTTCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCPSPHG*LHFSQP
Trigger: GGGCTGGGAGAAATGAAGCCACCCATGGGGACTGGG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGGTGGACCTGCGCAATaGGGTCAGCTGGGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEGGPAQ*GQLGSS
Trigger: AGAGGAACCCAGCTGACCCCATTGCGCAGGTCCACC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCCATCAGGCGCACGGTaGCTTCATGCAGGAACACCT +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSPSGAR*LHAGTP
Trigger: AGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCCTCCACACCGGGTCTTaGGCCCCATGGCAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: PGRESRRYSNSASHHGKPLHTGS*APWQQS
Trigger: TGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAG...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAACTTGGGAGCTCCCCCTaGTGCTATCAAGTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSELGSSP*CYQVRA
Trigger: AGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAAG...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGGAACAGGCGGATCCTaGAGGAAGCTTCCCTGTGAT +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSGTGGS*RKLPCD
Trigger: ATCACAGGGAAGCTTCCTGCAGGATCCGCCTGTTCC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGGAGGGATTAGGGGTTaGTCCCTGCCATCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSGGIRG*SLPSWF
Trigger: AAACCAGGATGGCAGGGACCAACCCCTAATCCCTCC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCGCAATGGGGTCAGCTaGGTTCCTCTGGGCACAGTA +
Preference number: 2 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCRNGVS*VPLGTV
Trigger: TACTGTGCCCAGAGGAACCCAGCTGACCCCATTGCG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACTCACTTCCAGGGCCTTaGGGATGCGTTCCACTTTGG +
Preference number: 2 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHSLPGP*GCVPLW
Trigger: CCAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGA...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATGCTGGGCACAGGCCTaGGGGCAACTGCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: ENQDATATQPRIMANPSTCWAQA*GQLLPG
Trigger: ACCAGGGAGCAGTTGCCCTCAGGCCTGTGCCCAGCA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCCAGGAAGCTTCCCTGTaGTGTGCAGCTGGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: PGRESRRYSNSASHHGKPQEASL*CAAGAA
Trigger: GGCTGCACCAGCTGCACATCACAGGGAAGCTTCCTG...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGGCTCTGGGCTCGGCTaGGGAAGTAGCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: ENQDATATQPRIMANPSTGSGLG*GSSWPG
Trigger: TCCTGGCCAGCTACTTCCTCAGCCGAGCCCAGAGCC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCGCCAACATTATTTCATaGATCCGCAGGCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: AFPGSEACMALQAWKMAFANIIS*IRRPAP
Trigger: GGGGGCAGGCCTGCGGATGCATGAAATAATGTTGGC...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCTGGGATCTTCTCCTCTaGACATTCAGCCAGGTTCAC +
Preference number: 2 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIWDLLL*TFSQVH
Trigger: GTGAACCTGGCTGAATGTGCAGAGGAGAAGATCCCA...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGATCTCAACCAGTGTaGTCGGTGGGATCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: AGMEDGLHQGALCHFQGLGSQPV*SVGSSP
Trigger: AGGAGAAGATCCCACCGAGCACACTGGTTGAGATCC...AAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAATCGAGAGAGAGGTaGAGGGGTGGGCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: ADPGRESRRYSNSASHHGKSRER*RGGLSL
Trigger: CAGGCTCAGCCCACCCCTCCACCTCTCTCTCGATTT...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGCCAGGCCCTGGACCATaGGCATCTAGTGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: TQTQGENQDATATQPRIMPGPGP*ASSDSS
Trigger: GCTGCTGTCACTAGATGCCCATGGTCCAGGGCCTGG...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGAGGGGCTTGGCAGCTTaGGAGCTCCCCCTGCTGCTA +
Preference number: 2 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWRGLAA*ELPLLL
Trigger: TAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCT...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGAAACTCAGGAAGGCTaGAGGCAGGGGCTTGGCAGC +
Preference number: 2 (lower is better)
Translates to: PGRESRRYSNSASHHGKPETQEG*RQGLGS
Trigger: GCTGCCAAGCCCCTGCCTCCAGCCTTCCTGAGTTTC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCTCAGCCTCGCATCATaGCAAACCCAAGCACACTGG +
Preference number: 2 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCLSLAS*QTQAHW
Trigger: CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCCTCAGCCTCGCATCATaGCAAACCCAAGCACACTGG +
Preference number: 2 (lower is better)
Translates to: SLTIICWQSLQERRSPTFLSLAS*QTQAHW
Trigger: CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAG...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTTTTCTCCCAGCCCCCTaGGCCTACCCTGAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPFLPAP*AYPELG
Trigger: CCCAAGCTCAGGGTAGGCCCAGGGGGCTGGGAGAAA...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCCCAGTCCCCATGGGTaGCTTCATTTCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMPSPHG*LHFSQP
Trigger: GGGCTGGGAGAAATGAAGCCACCCATGGGGACTGGG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGGTCCCCAGTCCCCATaGGTGGCTTCATTTCTCCCA +
Preference number: 2 (lower is better)
Translates to: ADPGRESRRYSNSASHHGGPQSP*VASFLP
Trigger: TGGGAGAAATGAAGCCACCCATGGGGACTGGGGACC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGGAGGGATTAGGGGTTaGTCCCTGCCATCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: SLTIICWQSLQERRSPTFGGIRG*SLPSWF
Trigger: AAACCAGGATGGCAGGGACCAACCCCTAATCCCTCC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTAGAGGGGCTTGCCGCTaGGGAGGGATTAGGGGTTGG +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPRGACR*GGIRGW
Trigger: CCAACCCCTAATCCCTCCCCAGCGGCAAGCCCCTCT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACTCAGCTGGGTTCCTCTaGGCACAGTATAGACTCTCC +
Preference number: 2 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHSAGFL*AQYRLS
Trigger: GGAGAGTCTATACTGTGCCCAGAGGAACCCAGCTGA...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGGTGGACCTGCGCAATaGGGTCAGCTGGGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: TQTQGENQDATATQPRIMGGPAQ*GQLGSS
Trigger: AGAGGAACCCAGCTGACCCCATTGCGCAGGTCCACC...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCGCCTTCTTCTTGGCCTaGGGTTTCACCAAGGACTCT +
Preference number: 2 (lower is better)
Translates to: AFPGSEACMALQAWKMAFAFFLA*GFTKDS
Trigger: AGAGTCCTTGGTGAAACCTCAGGCCAAGAAGAAGGC...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGCCCAGTTTCTGCCCTaGCACCTATCCTCTCACGCC +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPAQFLP*HLSSHA
Trigger: GGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGCAACTGCTCCCTGGTaGTCAGAGACTGCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPATAPW*SETAVP
Trigger: GGGGACAGCAGTCTCTGAGCACCAGGGAGCAGTTGC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGATAACATTCCAGCCTaGATCAAGGTGGCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: SLTIICWQSLQERRSPTFDNIPA*IKVALL
Trigger: CAGCAGGGCCACCTTGATGCAGGCTGGAATGTTATC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGGAACAGGCGGATCCTaGAGGAAGCTTCCCTGTGAT +
Preference number: 2 (lower is better)
Translates to: ADPGRESRRYSNSASHHGGTGGS*RKLPCD
Trigger: ATCACAGGGAAGCTTCCTGCAGGATCCGCCTGTTCC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGCTCCAGCAGGTTCTTaGAGAAGGCCTGGTGGACCT +
Preference number: 2 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMAPAGS*RRPGGP
Trigger: AGGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCCGCACGGTGGCTTCATaGAGGAACACCTTGCGGTAT +
Preference number: 2 (lower is better)
Translates to: ADPGRESRRYSNSASHHGRTVAS*RNTLRY
Trigger: ATACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCG...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGCCAGGCCCTGGACCATaGGCATCTAGTGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEPGPGP*ASSDSS
Trigger: GCTGCTGTCACTAGATGCCCATGGTCCAGGGCCTGG...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGAAACTCAGGAAGGCTaGAGGCAGGGGCTTGGCAGC +
Preference number: 2 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWETQEG*RQGLGS
Trigger: GCTGCCAAGCCCCTGCCTCCAGCCTTCCTGAGTTTC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGAGAAAGAAAGCAGGTaGGGTCCAAGCACACCCCAG +
Preference number: 2 (lower is better)
Translates to: ADPGRESRRYSNSASHHGEKESR*GPSTPQ
Trigger: CTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTAGTATAGACTCTCCTTaGCAGCTGACTTCACAGACC +
Preference number: 2 (lower is better)
Translates to: AFTRGLSVTSRALGMRSTSIDSP*QLTSQT
Trigger: GGTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACT...AGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCCGCAATGGGGTCAGCTaGGTTCCTCTGGGCACAGTA +
Preference number: 2 (lower is better)
Translates to: PGRESRRYSNSASHHGKPRNGVS*VPLGTV
Trigger: TACTGTGCCCAGAGGAACCCAGCTGACCCCATTGCG...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGTTGCAGAAGGCCTGGTaGACCTGCGCAATGGGGTCA +
Preference number: 2 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMLQKAW*TCAMGS
Trigger: TGACCCCATTGCGCAGGTCCACCAGGCCTTCTGCAA...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CAA 90 bp CCTGTGCGCCGGTTAAGGGTCTGCTTGATAGGAAATGCTACAGCCTaGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: PVRRLRVCLIGNATA*ALRIGPRGAFLSWS
Trigger: GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAGACCCTTAACCGGCGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR TCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCTCCACTTTGGTAAAATaGGAGCGCACAGCTGCATCG +
Preference number: 2 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCSTLVK*ERTAAS
Trigger: CGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGA...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACGCCCAGTTTCTGCCCTaGCACCTATCCTCTCACGCC +
Preference number: 2 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYAQFLP*HLSSHA
Trigger: GGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGC...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACCTCCTGCCCACCCTCTaGTCCAACCAGCCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYLLPTL*SNQPED
Trigger: ATCCTCAGGCTGGTTGGAGCAGAGGGTGGGCAGGAG...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGGATCTCAACCAGTGTaGTCGGTGGGATCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHGSQPV*SVGSSP
Trigger: AGGAGAAGATCCCACCGAGCACACTGGTTGAGATCC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGATGGCCACAGTGATTaGAGACGTCCACCACCGACA +
Preference number: 2 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMDGHSD*RRPPPT
Trigger: TGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACCCCAGTCCCCATGGGTaGCTTCATTTCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYPSPHG*LHFSQP
Trigger: GGGCTGGGAGAAATGAAGCCACCCATGGGGACTGGG...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGAACCACTGTTAAGTTaGGGACAGTCTGTACTGTGG +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSEPLLS*GQSVLW
Trigger: CCACAGTACAGACTGTCCCCAACTTAACAGTGGTTC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGATGGCAGCAGTCAGATaGATCTCAACCAGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWMAAVR*ISTSVL
Trigger: GAGCACACTGGTTGAGATCCATCTGACTGCTGCCAT...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTTCCATAGGTGGCCACTaGCCCTCTCGCAATGGCAGA +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPSIGGH*PSRNGR
Trigger: TCTGCCATTGCGAGAGGGCCAGTGGCCACCTATGGA...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACCAGCCTGGCTGGCACTaGCCTGTTTTTGCCAGAGCG +
Preference number: 2 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYQPGWH*PVFARA
Trigger: CGCTCTGGCAAAAACAGGCCAGTGCCAGCCAGGCTG...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CAA 90 bp GCAATGGGGTCAGCTGGGTTCCTCTGGGCACAGTATAGACTCTCCTaGGCAGCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTC +
Preference number: 2 (lower is better)
Translates to: AMGSAGFLWAQYRLS*AADFTDQLRSMKNF
Trigger: GAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACTGTGCCCAGAGGAACCCAGCTGACCCCATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAGACCCAGGGCGGACTTaGGCACGGAGCTCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRDPGRT*ARSSWR
Trigger: TCTCCAGGAGCTCCGTGCTCAAGTCCGCCCTGGGTC...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACGCTCCAGCAGGTTCTTaGAGAAGGCCTGGTGGACCT +
Preference number: 2 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYAPAGS*RRPGGP
Trigger: AGGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGC...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGAGAAAGAAAGCAGGTaGGGTCCAAGCACACCCCAG +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPEKESR*GPSTPQ
Trigger: CTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAAGTATAGACTCTCCTTaGCAGCTGACTTCACAGACC +
Preference number: 2 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSESIDSP*QLTSQT
Trigger: GGTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACT...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGCCTTCTTCTTGGCCTaGGGTTTCACCAAGGACTCT +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPAFFLA*GFTKDS
Trigger: AGAGTCCTTGGTGAAACCTCAGGCCAAGAAGAAGGC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGTCCACTTTGGTAAAATaGGAGCGCACAGCTGCATCG +
Preference number: 2 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMSTLVK*ERTAAS
Trigger: CGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGA...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCGGGAGCTCCCCCTGCTaGTATCAAGTCAGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFGSSPC*YQVRAA
Trigger: GGCAGCCCTGACTTGATAGCAGCAGGGGGAGCTCCC...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTGGGATCTTCTCCTCTaGACATTCAGCCAGGTTCAC +
Preference number: 2 (lower is better)
Translates to: PGRESRRYSNSASHHGKPWDLLL*TFSQVH
Trigger: GTGAACCTGGCTGAATGTGCAGAGGAGAAGATCCCA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCAAGGCCTGGTGGACCTaGGCAATGGGGTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFKAWWT*AMGSAG
Trigger: CCCAGCTGACCCCATTGCGCAGGTCCACCAGGCCTT...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGTCAGCTGGGTTCCTCTaGGCACAGTATAGACTCTCC +
Preference number: 2 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWSAGFL*AQYRLS
Trigger: GGAGAGTCTATACTGTGCCCAGAGGAACCCAGCTGA...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CAA 90 bp CCTTACTCTTCTCAGCTCCTTCCTGTGCGCCGGTTAAGGGTCTGCTaGATAGGAAATGCTACAGCCTTGGCTCTAAGGATAGGACCTCGT +
Preference number: 2 (lower is better)
Translates to: PYSSQLLPVRRLRVC*IGNATALALRIGPR
Trigger: ACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAGACCCTTAACCGGCGCACAGGAAGGAGCTGAGAAGAGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR TCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCCAATCTGTGTTTATTaGATATGTCTGGGACACAGT +
Preference number: 2 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSPICVY*ICLGHS
Trigger: ACTGTGTCCCAGACATATTCAATAAACACAGATTGG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGGCTCCTTCATTCAATaGTGGAAGTCAGAGACACAG +
Preference number: 2 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMGSFIQ*WKSETQ
Trigger: CTGTGTCTCTGACTTCCAGCATTGAATGAAGGAGCC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAATGCCTCAACTTACCATaGGGTTACTTCCTGATAAAC +
Preference number: 2 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSECLNLP*GYFLIN
Trigger: GTTTATCAGGAAGTAACCCCATGGTAAGTTGAGGCA...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACGAGTCCACAAAAGAATaGAGTAATTTCAAGTACTCC +
Preference number: 2 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHESTKE*SNFKYS
Trigger: GGAGTACTTGAAATTACTTCATTCTTTTGTGGACTC...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAAAATCGAGAGAGAGGTaGAGGGGTGGGCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRKSRER*RGGLSL
Trigger: CAGGCTCAGCCCACCCCTCCACCTCTCTCTCGATTT...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR CCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAGGTCCCCAGTCCCCATaGGTGGCTTCATTTCTCCCA +
Preference number: 2 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRGPQSP*VASFLP
Trigger: TGGGAGAAATGAAGCCACCCATGGGGACTGGGGACC...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACCGCCGGTTAAGGGTCTaGTTGATAGGAAATGCTACA +
Preference number: 2 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYRRLRV*LIGNAT
Trigger: TGTAGCATTTCCTATCAAGCAGACCCTTAACCGGCG...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR GCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCAAATATATACAGATATaGCTCAACTTACCATGGGGT +
Preference number: 2 (lower is better)
Translates to: SLTIICWQSLQERRSPTFKYIQI*LNLPWG
Trigger: ACCCCATGGTAAGTTGAGGCATATCTGTATATATTT...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACCTGCTTGATAGGAAATaGTACAGCCTTGGCTCTAAG +
Preference number: 2 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYLLDRK*YSLGSK
Trigger: CTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAG...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTAAACATGGTTTAAGTTaGACCACTGTTAAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPKHGLS*TTVKLG
Trigger: CCCCAACTTAACAGTGGTTCAACTTAAACCATGTTT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR TCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGACCCAAGACGCAGACATaGATCTCCAAAGAGGAATGT +
Preference number: 2 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRPKTQT*ISKEEC
Trigger: ACATTCCTCTTTGGAGATTCATGTCTGCGTCTTGGG...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR GCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTAAATATATACAGATATaGCTCAACTTACCATGGGGT +
Preference number: 2 (lower is better)
Translates to: RERKQVGSKHTPGITFQPKYIQI*LNLPWG
Trigger: ACCCCATGGTAAGTTGAGGCATATCTGTATATATTT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR TCA 72 bp GCCCAGGTCCCGTTGGAAGCCCGCCAGTTCAGCGCCTaGCGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: AQVPLEARQFSA*RVVGLPHSLAG
Trigger: GCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGGCGGGCTTCCAACGGGACCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp CCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCTCTaGGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: PGQASTSPCLVL*VVRRRRLCSSS
Trigger: GCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGAGCACCAAGCACGGAGAGGTGGATGCCTGGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp GCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTaGGGCTGGCTCCTGCCATCAGGCGCACGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: AAGCVPAAGGCG*GWLLPSGARWL
Trigger: AAGCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp GGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGGGCTaGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCA +
Preference number: 3 (lower is better)
Translates to: GCVPAAGGCGWG*LLPSGARWLHA
Trigger: TGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACCCGCACCCACCAGCTGCTGGAACACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp GCCAGGCATCCACCTCTCCGTGCTTGGTGCTCTGCGTaGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: ARHPPLRAWCSA*CAAAGCVPAAG
Trigger: ACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGAGCACCAAGCACGGAGAGGTGGATGCCTGGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp CGCTCCAGCAGGTTCTTGCAGAAGGCCTGGTGGACCTaGGCAATGGGGTCAGCTGGGTTCCTCTGGGCACAG +
Preference number: 3 (lower is better)
Translates to: RSSRFLQKAWWT*AMGSAGFLWAQ
Trigger: CTGTGCCCAGAGGAACCCAGCTGACCCCATTGCGCAGGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp GGCATGCTGGGCACAGGCCTGAGGGCAACTGCTCCCTaGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCT +
Preference number: 3 (lower is better)
Translates to: GMLGTGLRATAP*CSETAVPQRKP
Trigger: AGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAGCAGTTGCCCTCAGGCCTGTGCCCAGCATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp ACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTaGCCTGTTTTTGCCAGAGCGCTGTCCGTAGCGACA +
Preference number: 3 (lower is better)
Translates to: TRGRSPPQPGWH*PVFARALSVAT
Trigger: TGTCGCTACGGACAGCGCTCTGGCAAAAACAGGCCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCCAGGGGCTTGGCAGCTaGGGAGCTCCCCCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: AFPGSEACMALQAWKMAFQGLGS*GAPPAA
Trigger: AGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCTG...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp GCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTCGCTCCAGCAGGTTCTaGCAGAAGGCCTGGTGGACC +
Preference number: 3 (lower is better)
Translates to: AFTRGLSVTSRALGMRSTRSSRF*QKAWWT
Trigger: GGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGCG...AGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR CAA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGGACCCAGGGCGGACTaGAGCACGGAGCTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEGPRAD*STELLE
Trigger: CTCCAGGAGCTCCGTGCTCAAGTCCGCCCTGGGTCC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCGGACCCAGGGCGGACTaGAGCACGGAGCTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: AFPGSEACMALQAWKMAFGPRAD*STELLE
Trigger: CTCCAGGAGCTCCGTGCTCAAGTCCGCCCTGGGTCC...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCCCTCCACACCGGGTCTaGAGCCCCATGGCAGCAGTC +
Preference number: 3 (lower is better)
Translates to: AFPGSEACMALQAWKMAFPPHRV*SPMAAV
Trigger: GACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGG...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCGCCAGGAAGCCCAGCTaGCCTCCACACCGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: AFPGSEACMALQAWKMAFARKPS*PPHRVL
Trigger: CAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGC...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp ATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACGCCAGGAAGCCCAGCTaGCCTCCACACCGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: MHGSAGMEDGLHQGALCHARKPS*PPHRVL
Trigger: CAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGC...GTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR CAA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGCTGCCCAGGTCCCGTaGGAAGCCCGCCAGTTCAGC +
Preference number: 3 (lower is better)
Translates to: ADPGRESRRYSNSASHHGAAQVP*EARQFS
Trigger: GCTGAACTGGCGGGCTTCCAACGGGACCTGGGCAGC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTaGCACCTATCCTCTCACGCCCACCAGGCCCTGGAC +
Preference number: 3 (lower is better)
Translates to: CCYQVRAAQFLP*HLSSHAHQALD
Trigger: GTCCAGGGCCTGGTGGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp GCTTGGGAGCTCCCCCTGCTGCTATCAAGTCAGGGCTaGCCAGTTTCTGCCCTGCCACCTATCCTCTCACGC +
Preference number: 3 (lower is better)
Translates to: AWELPLLLSSQG*PVSALPPILSR
Trigger: GCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp GCAATGGCAGTGCCACCACCCAGCTTAACAATCATCTaGTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACC +
Preference number: 3 (lower is better)
Translates to: AMAVPPPSLTII*WQSLQERRSPT
Trigger: GGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGTGGTGGCACTGCCATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp GAGGTGGCCCCACTGACGTTGAGGCTGCTCCATAGGTaGCCACTGGCCCTCTCGCAATGGCAGAAGGAACTC +
Preference number: 3 (lower is better)
Translates to: EVAPLTLRLLHR*PLALSQWQKEL
Trigger: GAGTTCCTTCTGCCATTGCGAGAGGGCCAGTGGCCACCTATGGAGCAGCCTCAACGTCAGTGGGGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGCTGGAGGCAGGGGCTaGGCAGCTTGGGAGCTCCCC +
Preference number: 3 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEAGGRG*AAWELP
Trigger: GGGGAGCTCCCAAGCTGCCAAGCCCCTGCCTCCAGC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR TCA 72 bp TGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTaGGCCCCATGGCAGCAGTCAGATGGATCTCAACCA +
Preference number: 3 (lower is better)
Translates to: WPGSPACLHTGS*APWQQSDGSQP
Trigger: TGGTTGAGATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp CCAATTAGAAACAGCCGGGGAGTCAGCAGGCAGGGCTaGCCATCACTAGTGCCGAATGCCCCCAAGACGCAG +
Preference number: 3 (lower is better)
Translates to: PIRNSRGVSRQG*PSLVPNAPKTQ
Trigger: CTGCGTCTTGGGGGCATTCGGCACTAGTGATGGGCAGCCCTGCCTGCTGACTCCCCGGCTGTTTCTAATTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR GCA 72 bp CATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTaGAGGCATGGAAGATGGCCTTCACCAGGGGGCTCC +
Preference number: 3 (lower is better)
Translates to: HLLSQGVRHAWL*RHGRWPSPGGS
Trigger: GGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR GCA 72 bp TGGCCACTGGCCCTCTCGCAATGGCAGAAGGAACTCTaGTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGC +
Preference number: 3 (lower is better)
Translates to: WPLALSQWQKEL*CPSAFPGSEAC
Trigger: GCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCTTCTGCCATTGCGAGAGGGCCAGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp CCACCTATCCTCTCACGCCCACCAGGCCCTGGACCATaGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: PPILSRPPGPGP*ASSDSSFKGLC
Trigger: GCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCCATGGTCCAGGGCCTGGTGGGCGTGAGAGGATAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp GCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATaGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGG +
Preference number: 3 (lower is better)
Translates to: AAHLLSQGVRHA*LCRHGRWPSPG
Trigger: CCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp ATGGCAGTGCCACCACCCAGCTTAACAATCATCTGCTaGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTC +
Preference number: 3 (lower is better)
Translates to: MAVPPPSLTIIC*QSLQERRSPTF
Trigger: GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGTGGTGGCACTGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp GGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATaGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: GVRHAWLCRHGR*PSPGGSLSLPG
Trigger: CCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR CAA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGCTGCCCAGGTCCCGTaGGAAGCCCGCCAGTTCAGC +
Preference number: 3 (lower is better)
Translates to: RERKQVGSKHTPGITFQPAAQVP*EARQFS
Trigger: GCTGAACTGGCGGGCTTCCAACGGGACCTGGGCAGC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp CATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTaGAGGCATGGAAGATGGCCTTCACCAGGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: HLLSQGVRHAWL*RHGRWPSPGGS
Trigger: AGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
3UTR-3UTR CAA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCGCTCCAGCAGGTTCTaGCAGAAGGCCTGGTGGACC +
Preference number: 3 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMRSSRF*QKAWWT
Trigger: GGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGCG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR TCA 72 bp TCCAGGGCCTTGGGGATGCGTTCCACTTTGGTAAAATaGGAGCGCACAGCTGCATCGTCTCCCTGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: SRALGMRSTLVK*ERTAASSPWSQ
Trigger: CTGGCTCCAGGGAGACGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGAACGCATCCCCAAGGCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp ATCGTCTCCCTGGAGCCAGCTGATGGCCACAGTGATTaGAGACGTCCACCACCGACAGATGATGTCTGGACC +
Preference number: 3 (lower is better)
Translates to: IVSLEPADGHSD*RRPPPTDDVWT
Trigger: GGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATCAGCTGGCTCCAGGGAGACGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp GGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATaGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGG +
Preference number: 3 (lower is better)
Translates to: GVRHAWLCRHGR*PSPGGSFIQCW
Trigger: CCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR CAA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACAGCTGGACCACGTGGTaGAGGGCAGGGTCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYSWTTW*RAGSEV
Trigger: CACCTCTGACCCTGCCCTCAACCACGTGGTCCAGCT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp ACACAACGCCATGTGTACATCGGAACAGGCGGATCCTaGAGGAAGCTTCCCTGTGATGTGCAGCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: TQRHVYIGTGGS*RKLPCDVQLVQ
Trigger: CTGCACCAGCTGCACATCACAGGGAAGCTTCCTGCAGGATCCGCCTGTTCCGATGTACACATGGCGTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTaGTCGGTGGGATCTTCTCCTCTGCACATTCAGCCA +
Preference number: 3 (lower is better)
Translates to: APWQQSDGSQPV*SVGSSPLHIQP
Trigger: TGGCTGAATGTGCAGAGGAGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCCAGTATAGACTCTCCTaGGCAGCTGACTTCACAGAC +
Preference number: 3 (lower is better)
Translates to: SLTIICWQSLQERRSPTFQYRLS*AADFTD
Trigger: GTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACTG...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp GATGCGTTCCACTTTGGTAAAATGAGAGCGCACAGCTaGATCGTCTCCCTGGAGCCAGCTGATGGCCACAGT +
Preference number: 3 (lower is better)
Translates to: DAFHFGKMRAHS*IVSLEPADGHS
Trigger: ACTGTGGCCATCAGCTGGCTCCAGGGAGACGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGAACGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR-3UTR CAA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTTGGGGCCTTTCTGTCTaGGAGCATTTTACAGTTTCT +
Preference number: 3 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSWGLSV*EHFTVS
Trigger: AGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCA...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR TCA 72 bp CTCTCTTCTTCCTGGTCTCCAGCCTTCTTCTTGGCCTaGGGTTTCACCAAGGACTCTATAGCTCGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: LSSSWSPAFFLA*GFTKDSIARSS
Trigger: GCTGGAGCGAGCTATAGAGTCCTTGGTGAAACCTCAGGCCAAGAAGAAGGCTGGAGACCAGGAAGAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR GCA 72 bp TCCTGTGCGCCGGTTAAGGGTCTGCTTGATAGGAAATaGTACAGCCTTGGCTCTAAGGATAGGACCTCGTGG +
Preference number: 3 (lower is better)
Translates to: SCAPVKGLLDRK*YSLGSKDRTSW
Trigger: CCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAGACCCTTAACCGGCGCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR GCA 72 bp TCTTCTCAGCTCCTTCCTGTGCGCCGGTTAAGGGTCTaGTTGATAGGAAATGCTACAGCCTTGGCTCTAAGG +
Preference number: 3 (lower is better)
Translates to: SSQLLPVRRLRV*LIGNATALALR
Trigger: CCTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAGACCCTTAACCGGCGCACAGGAAGGAGCTGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR-3UTR CAA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACAGTATAGACTCTCCTaGGCAGCTGACTTCACAGAC +
Preference number: 3 (lower is better)
Translates to: ENQDATATQPRIMANPSTQYRLS*AADFTD
Trigger: GTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACTG...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CCA 72 bp AAATGCTACAGCCTTGGCTCTAAGGATAGGACCTCGTaGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCT +
Preference number: 3 (lower is better)
Translates to: KCYSLGSKDRTS*GLSVLEHFTVS
Trigger: AGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR GCA 72 bp AATCTCCAAAGAGGAATGTCAAAAGCTCTCCGGTTATaGCATGTGCTAAAGGCTATTTTAGTTACAGGACAA +
Preference number: 3 (lower is better)
Translates to: NLQRGMSKALRL*HVLKAILVTGQ
Trigger: TTGTCCTGTAACTAAAATAGCCTTTAGCACATGGCATAACCGGAGAGCTTTTGACATTCCTCTTTGGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGCGTCGCCACCGCCCATaGCACCCGACAACCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWRRHRP*HPTTPA
Trigger: GGCGGGGGTTGTCGGGTGTCATGGGCGGTGGCGACG...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGCCGCCATGTTTGCGTTaGGCCCGGGCGCCGCACAGA +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWPPCLR*ARAPHR
Trigger: TCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGG...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGACCCGCCGCCATGTTTaGGTTGCGCCCGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWTRRHV*VAPGRR
Trigger: GCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGT...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR GCA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCGGTCCACAGCTCCGCTaGTGCTGCCCCTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: RWPALAGRARHPPLRAWCGPQLR*CCPCHC
Trigger: GCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACC...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGGGTCCAGGCGGGAGGTaGGCAGTGCCCGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWGPGGR*AVPGPK
Trigger: TTTTGGGCCGGGCACTGCCCACCTCCCGCCTGGACC...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGGTGGCCCGCTCTCGCTaGCCGGGCCAGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWVARSR*PGQAST
Trigger: GGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCAC...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTGGCCCGCTCTCGCTaGCCGGGCCAGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAVARSR*PGQAST
Trigger: GGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCAC...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGAGGACCGGGACCTGCTaGACCTGTGGCGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWRTGTC*TCGAAT
Trigger: AGTTGCTGCGCCACAGGTGCAGCAGGTCCCGGTCCT...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCCTCCTGCCCACCCTCTaGTCCAACCAGCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RWPALAGRARHPPLRAWCLLPTL*SNQPED
Trigger: ATCCTCAGGCTGGTTGGAGCAGAGGGTGGGCAGGAG...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGAGCAGCACTGCCCGCTaGCCCGGGGAGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWSSTAR*PGEERK
Trigger: CTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCT...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCCCAGGCCCTGGACCATaGGCATCTAGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWPALAGRARHPPLRAWCPGPGP*ASSDSS
Trigger: GCTGCTGTCACTAGATGCCCATGGTCCAGGGCCTGG...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCACGCCAGTTCAGCGCCTaGCGCGTGGTAGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAARQFSA*RVVGLP
Trigger: GGGGAGACCTACCACGCGTCAGGCGCTGAACTGGCG...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCATGAGAGCGCACAGCTaGATCGTCTCCCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RWPALAGRARHPPLRAWCMRAHS*IVSLEP
Trigger: TGGCTCCAGGGAGACGATGCAGCTGTGCGCTCTCAT...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATTCGGCCAGCAGCACTaGCCGCTGGCCCGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPFGQQH*PLARGG
Trigger: TCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCGAA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGTGCTGGTCAGAGTCGTaGGCCCCTCCCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWCWSES*APPHCS
Trigger: GCTGCAGTGGGGAGGGGCCCACGACTCTGACCAGCA...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGGGTGCGGGTGGGGCTaGCTCCTGCCATCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPGCGWG*LLPSGA
Trigger: TGCGCCTGATGGCAGGAGCCAGCCCCACCCGCACCC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCCGTCGCCACCGCCCATaGCACCCGACAACCCCCGCC +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPRRHRP*HPTTPA
Trigger: GGCGGGGGTTGTCGGGTGTCATGGGCGGTGGCGACG...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGGAGCCTGAGTGTGGGTaGTGGTCAGAGTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWEPECG*WSESWA
Trigger: GGCCCACGACTCTGACCAGCACCCACACTCAGGCTC...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGGGCGAGATCCAGATCTaGCTGTTTCCGGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWGEIQI*LFPVPP
Trigger: TGGAGGCACCGGAAACAGGCAGATCTGGATCTCGCC...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAAGCTGTGTGCCAGCCTaGGCAGGCTGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPSCVPA*AGCPGP
Trigger: GGGACCTGGGCAGCCTGCGCAGGCTGGCACACAGCT...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCTGCCTCAGTGGCTaGCGTGGCCCGCCGGCACTG +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSACLSG*RGPPAL
Trigger: CAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATTCTGGCCCAGGGGGTaGCAGAGCCAGCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPFWPRG*QSQRRE
Trigger: CTCCCTGCGCTGGCTCTGCCACCCCCTGGGCCAGAA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGAAATCGAGAGAGAGGTaGAGGGGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWKSRER*RGGLSL
Trigger: CAGGCTCAGCCCACCCCTCCACCTCTCTCTCGATTT...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCTCACTCAGGAGGCCATaGGAGAAACAGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RWPALAGRARHPPLRAWCSLRRP*EKQSPG
Trigger: TCCCGGAGACTGTTTCTCCCATGGCCTCCTGAGTGA...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGGCTGGGGGCGGGGCTaGAGAATAGGAGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPGWGRG*RIGVAL
Trigger: CAGGGCAACTCCTATTCTTCAGCCCCGCCCCCAGCC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGGTCTGCACCTGCTGCTaGATGGTGACCGGCTGTACC +
Preference number: 4 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWVCTCC*MVTGCT
Trigger: GGTACAGCCGGTCACCATTCAGCAGCAGGTGCAGAC...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATGCTGGGCACAGGCCTaGGGGCAACTGCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPCWAQA*GQLLPG
Trigger: ACCAGGGAGCAGTTGCCCTCAGGCCTGTGCCCAGCA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCGGATCTCAACCAGTGTaGTCGGTGGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RWPALAGRARHPPLRAWCGSQPV*SVGSSP
Trigger: AGGAGAAGATCCCACCGAGCACACTGGTTGAGATCC...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTATGGGCGGAAGCTGTGTaGCAGCCTGCGCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVWAEAV*QPAQAA
Trigger: GGCAGCCTGCGCAGGCTGGCACACAGCTTCCGCCCA...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCCCGTGCTTGGTGCTCTaGGTGGTGCGCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPPCLVL*VVRRRR
Trigger: CCTGCGGCGGCGCACCACGCAGAGCACCAAGCACGG...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTACGAGGAGCGCGAGTGTaGCCGGATCACTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVRGARV*PDHWLP
Trigger: GGGGAGCCAGTGATCCGGCCACACTCGCGCTCCTCG...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTCGAGGAGCGCGAGTGTaGCCGGATCACTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AFTRGLSVTSRALGMRSTRGARV*PDHWLP
Trigger: GGGGAGCCAGTGATCCGGCCACACTCGCGCTCCTCG...AGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGGGTCCAGGCGGGAGGTaGGCAGTGCCCGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLGPGGR*AVPGPK
Trigger: TTTTGGGCCGGGCACTGCCCACCTCCCGCCTGGACC...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCTTCTGGCCCAGGGGGTaGCAGAGCCAGCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIFWPRG*QSQRRE
Trigger: CTCCCTGCGCTGGCTCTGCCACCCCCTGGGCCAGAA...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCCAGCAGGATGGCGGTaGCCCGCTCTCGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCPAGWR*PALAGR
Trigger: CCGGCCAGCGAGAGCGGGCCACCGCCATCCTGCTGG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGGCAGGCCAGCAGGATaGCGGTGGCCCGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPGRPAG*RWPALA
Trigger: AGCGAGAGCGGGCCACCGCCATCCTGCTGGCCTGCC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGCAGCACTGCCCGCTaGCCCGGGGAGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLSSTAR*PGEERK
Trigger: CTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCT...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATGCCCAGGGGTGCACTaGCCTGAGTGGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPCPGVH*PEWPRS
Trigger: GCTTCTGGGCCACTCAGGCCAGTGCACCCCTGGGCA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
3UTR CAA 72 bp TGGTTGAGGGCAGGGTCAGAGGTGGCCCCACTGACGTaGAGGCTGCTCCATAGGTGGCCACTGGCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: WLRAGSEVAPLT*RLLHRWPLALS
Trigger: CGAGAGGGCCAGTGGCCACCTATGGAGCAGCCTCAACGTCAGTGGGGCCACCTCTGACCCTGCCCTCAACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCACTCCACACCGGGTCTTaGGCCCCATGGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPLHTGS*APWQQS
Trigger: TGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAG...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAGGCTCTGGGCTCGGCTaGGGAAGTAGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVGSGLG*GSSWPG
Trigger: TCCTGGCCAGCTACTTCCTCAGCCGAGCCCAGAGCC...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGGTGGAGGGGTGGGCTaGGCCTGGTGGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWGGGVG*AWWSGG
Trigger: GCCTCCTGACCACCAGGCTCAGCCCACCCCTCCACC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGTGCTGGGCACAGGCCTaGGGGCAACTGCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLCWAQA*GQLLPG
Trigger: ACCAGGGAGCAGTTGCCCTCAGGCCTGTGCCCAGCA...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAACCCTCTGCCCACTCTaGAAAGAGGGGCTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAATLCPL*KEGLAA
Trigger: AGCGGCAAGCCCCTCTTTTCAGAGTGGGCAGAGGGT...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACACCCGCCGCCATGTTTaGGTTGCGCCCGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHTRRHV*VAPGRR
Trigger: GCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGT...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS-3UTR GCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCATGCTGCTGCCACTGCTaGCGCTGCTGCTACCACTAC +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAACCCHC*RCCYHY
Trigger: GTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCA...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGACCAGGACCGGGACCTaGTGCACCTGTGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLTRTGT*CTCGAA
Trigger: TGCTGCGCCACAGGTGCAGCAGGTCCCGGTCCTGGT...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGTGGTGCTCTGCGTGGTaGGCCGCCGCAGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLWCSAW*AAAGCV
Trigger: AACACAGCCTGCGGCGGCGCACCACGCAGAGCACCA...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGCCGTGCTTGGTGCTCTaGGTGGTGCGCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWPCLVL*VVRRRR
Trigger: CCTGCGGCGGCGCACCACGCAGAGCACCAAGCACGG...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGGAGAGAAGCCAGCCTaGGACCCTGAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAGEKPA*DPESEA
Trigger: AGCCTCTGACTCAGGGTCCCAGGCTGGCTTCTCTCC...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCCTCAGTGGCTGGCGTaGCCCGCCGGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSPQWLA*PAGTGR
Trigger: TCTTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCTGCCTCAGTGGCTaGCGTGGCCCGCCGGCACTG +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHACLSG*RGPPAL
Trigger: CAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAACAAAGCCTGCCTCAGTaGCTGGCGTGGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEQSLPQ*LAWPAG
Trigger: GCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTTTG...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCCAAAGCCTGCCTCAGTaGCTGGCGTGGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFQSLPQ*LAWPAG
Trigger: GCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTTTG...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGTCAGCTGGGTTCCTCTaGGCACAGTATAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWSAGFL*AQYRLS
Trigger: GGAGAGTCTATACTGTGCCCAGAGGAACCCAGCTGA...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCTGTTCCAGCAGCTGGTaGGTGCGGGTGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWICSSSW*VRVGLA
Trigger: AGCCAGCCCCACCCGCACCCACCAGCTGCTGGAACA...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGTCAGGAGGCGGCAATaGCAGTGCCACCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPVRRRQ*QCHHPA
Trigger: AGCTGGGTGGTGGCACTGCCATTGCCGCCTCCTGAC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGTGCCCAGGGGTGCACTaGCCTGAGTGGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLCPGVH*PEWPRS
Trigger: GCTTCTGGGCCACTCAGGCCAGTGCACCCCTGGGCA...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATTTCTCCCAGCCCCCTaGGCCTACCCTGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPFLPAP*AYPELG
Trigger: CCCAAGCTCAGGGTAGGCCCAGGGGGCTGGGAGAAA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTACTGCGGCCAGAGCCTaGGTGTGGGTGCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: AFTRGLSVTSRALGMRSTTAARA*VWVLVR
Trigger: TCTGACCAGCACCCACACTCAGGCTCTGGCCGCAGT...AGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGGTGCCTCCAGAAGGTaGCCGAGGAGCGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPGASRR*PRSASV
Trigger: CACACTCGCGCTCCTCGGTCACCTTCTGGAGGCACC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCCTCCACACCGGGTCTTaGGCCCCATGGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWILHTGS*APWQQS
Trigger: TGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAG...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGGCTCTGGGCTCGGCTaGGGAAGTAGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPGSGLG*GSSWPG
Trigger: TCCTGGCCAGCTACTTCCTCAGCCGAGCCCAGAGCC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCTGCTGGGCACAGGCCTaGGGGCAACTGCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPCWAQA*GQLLPG
Trigger: ACCAGGGAGCAGTTGCCCTCAGGCCTGTGCCCAGCA...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGGTCCACAGCTCCGCTaGTGCTGCCCCTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSGPQLR*CCPCHC
Trigger: GCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGGTCCACAGCTCCGCTaGTGCTGCCCCTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPGPQLR*CCPCHC
Trigger: GCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGTGGATGATCCTCGTCTaGGGAGTGGTGCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWWMILV*GVVLNV
Trigger: AACATTCAGCACCACTCCGCAGACGAGGATCATCCA...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGGACCGGGACCTGCTaGACCTGTGGCGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLRTGTC*TCGAAT
Trigger: AGTTGCTGCGCCACAGGTGCAGCAGGTCCCGGTCCT...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCGCGGGAGGTGGGCAGTaGCCGGCCCAAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCAGGGQ*PAQNCQ
Trigger: CTGGCAGTTTTGGGCCGGGCACTGCCCACCTCCCGC...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGCTCCAGCAGGTTCTTaGAGAAGGCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAAPAGS*RRPGGP
Trigger: AGGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGC...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGGTGGGGCTGGCTCCTaGCATCAGGCGCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHGGAGS*HQAHGG
Trigger: GCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCGGGAGCTCCCCCTGCTaGTATCAAGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIGSSPC*YQVRAA
Trigger: GGCAGCCCTGACTTGATAGCAGCAGGGGGAGCTCCC...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTGCAACTGCTCCCTGGTaGTCAGAGACTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGATAPW*SETAVP
Trigger: GGGGACAGCAGTCTCTGAGCACCAGGGAGCAGTTGC...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGAGTTGCCCTGGGTGTaGTGGGAACTGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPELPWV*WELRWE
Trigger: CTCCCACCTCAGTTCCCACCACACCCAGGGCAACTC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGCCTGAGTGTGGGTGCTaGTCAGAGTCGTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLPECGC*SESWAP
Trigger: AGGGGCCCACGACTCTGACCAGCACCCACACTCAGG...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGTGTGGCCGGATCACTaGCTCCCCATGAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPVWPDH*LPMNQQ
Trigger: CTGCTGGTTCATGGGGAGCCAGTGATCCGGCCACAC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTGTGTGGCCGGATCACTaGCTCCCCATGAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGVWPDH*LPMNQQ
Trigger: CTGCTGGTTCATGGGGAGCCAGTGATCCGGCCACAC...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGGTCCAGGCGGGAGGTaGGCAGTGCCCGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWGPGGR*AVPGPK
Trigger: TTTTGGGCCGGGCACTGCCCACCTCCCGCCTGGACC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTGTGGCCCGCCGGCACTaGAAGACTTTCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGVARRH*KTFLSS
Trigger: GCTGCTCAAGAAAGTCTTCCAGTGCCGGCGGGCCAC...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCCCTCAGTGGCTGGCGTaGCCCGCCGGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFPQWLA*PAGTGR
Trigger: TCTTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGG...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGCCTGCCTCAGTGGCTaGCGTGGCCCGCCGGCACTG +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMACLSG*RGPPAL
Trigger: CAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGGTGGACCTGCGCAATaGGGTCAGCTGGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPGGPAQ*GQLGSS
Trigger: AGAGGAACCCAGCTGACCCCATTGCGCAGGTCCACC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCATTCTTGCAGAAGGCCTaGTGGACCTGCGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAFLQKA*WTCAMG
Trigger: CCCCATTGCGCAGGTCCACCAGGCCTTCTGCAAGAA...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCGGAGCTCCTGGAGAGTaGGGGGCTCATAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIGAPGE*GAHNPH
Trigger: GTGGGGGTTATGAGCCCCCCACTCTCCAGGAGCTCC...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGGGAGCTCCTGGAGAGTaGGGGGCTCATAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLGAPGE*GAHNPH
Trigger: GTGGGGGTTATGAGCCCCCCACTCTCCAGGAGCTCC...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTGCCCAGGTCCCGTTaGAAGCCCGCCAGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHLPRSR*KPASSA
Trigger: CGCTGAACTGGCGGGCTTCCAACGGGACCTGGGCAG...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCTGCCCAGGTCCCGTTaGAAGCCCGCCAGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSLPRSR*KPASSA
Trigger: CGCTGAACTGGCGGGCTTCCAACGGGACCTGGGCAG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGGGTGCGGGTGGGGCTaGCTCCTGCCATCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHGCGWG*LLPSGA
Trigger: TGCGCCTGATGGCAGGAGCCAGCCCCACCCGCACCC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTTGTTCCAGCAGCTGGTaGGTGCGGGTGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSCSSSW*VRVGLA
Trigger: AGCCAGCCCCACCCGCACCCACCAGCTGCTGGAACA...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGCTTGGTGCTCTGCGTaGTGCGCCGCCGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFAWCSA*CAAAGC
Trigger: ACAGCCTGCGGCGGCGCACCACGCAGAGCACCAAGC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCCACCTCTCCGTGCTTaGTGCTCTGCGTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSPPLRA*CSAWCA
Trigger: GGCGCACCACGCAGAGCACCAAGCACGGAGAGGTGG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGTGGCCCGCTCTCGCTaGCCGGGCCAGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMVARSR*PGQAST
Trigger: GGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCAC...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGCCAGCAGGATGGCGGTaGCCCGCTCTCGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMPAGWR*PALAGR
Trigger: CCGGCCAGCGAGAGCGGGCCACCGCCATCCTGCTGG...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGCCAGCAGGATGGCGGTaGCCCGCTCTCGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKPAGWR*PALAGR
Trigger: CCGGCCAGCGAGAGCGGGCCACCGCCATCCTGCTGG...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCTTTCTCCCAGCCCCCTaGGCCTACCCTGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIFLPAP*AYPELG
Trigger: CCCAAGCTCAGGGTAGGCCCAGGGGGCTGGGAGAAA...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTACAGCCTGCATCAAGGTaGCCCTGCTGTGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVQPASR*PCCEHP
Trigger: GGGGTGCTCACAGCAGGGCCACCTTGATGCAGGCTG...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTCGTCGCCACCGCCCATaGCACCCGACAACCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPRRHRP*HPTTPA
Trigger: GGCGGGGGTTGTCGGGTGTCATGGGCGGTGGCGACG...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGGCTACACAGCTGTTCTaGAAACAAGTCAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWATQLF*KQVREL
Trigger: GAGTTCCCTGACTTGTTTTCAGAACAGCTGTGTAGC...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGTCCTGGCGCAGTTTATaGTTGACCTGCTGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWSWRSL*LTCCKY
Trigger: ATACTTGCAGCAGGTCAATCATAAACTGCGCCAGGA...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGGTGCCTCCAGAAGGTaGCCGAGGAGCGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFGASRR*PRSASV
Trigger: CACACTCGCGCTCCTCGGTCACCTTCTGGAGGCACC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGGCTCTGGGCTCGGCTaGGGAAGTAGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFGSGLG*GSSWPG
Trigger: TCCTGGCCAGCTACTTCCTCAGCCGAGCCCAGAGCC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGACCCAGGGCGGACTTaGGCACGGAGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWDPGRT*ARSSWR
Trigger: TCTCCAGGAGCTCCGTGCTCAAGTCCGCCCTGGGTC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACGCTGGACCACGTGGTTaGGGGCAGGGTCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MHGSAGMEDGLHQGALCHAGPRG*GQGQRW
Trigger: CCACCTCTGACCCTGCCCTCAACCACGTGGTCCAGC...GTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR TCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGCGCCAGTTCAGCGCCTaGCGCGTGGTAGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQRQFSA*RVVGLP
Trigger: GGGGAGACCTACCACGCGTCAGGCGCTGAACTGGCG...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTAGGGGTGCACTGGCCTaGGTGGCCCAGAAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSRGALA*VAQKPR
Trigger: CCGAGGCTTCTGGGCCACTCAGGCCAGTGCACCCCT...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTACCCCTGGGCCTACCCTaGGCTTGGGCTAACATCCTA +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVPLGLP*AWANIL
Trigger: TAGGATGTTAGCCCAAGCTCAGGGTAGGCCCAGGGG...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGTGCTGCCCCTGCCATTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSAGMEDGLHQGALCHFQCCPCH*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCA...CTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGTGGGTGAATGACCGTTaGACTGAAGGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWWVNDR*TEGSTA
Trigger: AGCTGTGGACCCTTCAGTGCAACGGTCATTCACCCA...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGCCGGGGCAAGGGTCTaGAGCGTGCCATTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWAGARV*SVPLAV
Trigger: AACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGCCGGGGCAAGGGTCTaGAGCGTGCCATTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPAGARV*SVPLAV
Trigger: AACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGC...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGAATGGTCCCACTGCTaGCCACCAGGGTTGGTACTT +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAEWSHC*PPGLVL
Trigger: AAGTACCAACCCTGGTGGGCAGCAGTGGGACCATTC...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGAGCCTGAGTGTGGGTaGTGGTCAGAGTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSEPECG*WSESWA
Trigger: GGCCCACGACTCTGACCAGCACCCACACTCAGGCTC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCCCTCTCCGTGCTTGGTaGTCTGCGTGGTGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGPLRAW*SAWCAA
Trigger: GGCGGCGCACCACGCAGAGCACCAAGCACGGAGAGG...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGCCTCTCCGTGCTTGGTaGTCTGCGTGGTGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQPLRAW*SAWCAA
Trigger: GGCGGCGCACCACGCAGAGCACCAAGCACGGAGAGG...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGTTCGGCCAGCAGCACTaGCCGCTGGCCCGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKFGQQH*PLARGG
Trigger: TCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCGAA...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGGGAGCTCCCCCTGCTaGTATCAAGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSGSSPC*YQVRAA
Trigger: GGCAGCCCTGACTTGATAGCAGCAGGGGGAGCTCCC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAACTGTGCTGGGGCTCCTaGCCACCCTCTGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSELCWGS*PPSAPT
Trigger: GGTTGGAGCAGAGGGTGGGCAGGAGCCCCAGCACAG...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCACAGAGTTGGAGCCTGTaGGGAGGCCGCCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPQSWSL*GGRRGR
Trigger: TCTCCCTCGGCGGCCTCCCCACAGGCTCCAACTCTG...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCGACCTGCTGCACCTGTaGCGCAGCAACTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIDLLHL*RSNCLH
Trigger: GTGCAGACAGTTGCTGCGCCACAGGTGCAGCAGGTC...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGGTGTGGCCGGATCACTaGCTCCCCATGAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLVWPDH*LPMNQQ
Trigger: CTGCTGGTTCATGGGGAGCCAGTGATCCGGCCACAC...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCTTCTGGCCCAGGGGGTaGCAGAGCCAGCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSFWPRG*QSQRRE
Trigger: CTCCCTGCGCTGGCTCTGCCACCCCCTGGGCCAGAA...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGAGTATAGACTCTCCTTaGCAGCTGACTTCACAGACC +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWSIDSP*QLTSQT
Trigger: GGTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACT...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCACGCAATGGGGTCAGCTaGGTTCCTCTGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPRNGVS*VPLGTV
Trigger: TACTGTGCCCAGAGGAACCCAGCTGACCCCATTGCG...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATTCTTGCAGAAGGCCTaGTGGACCTGCGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPFLQKA*WTCAMG
Trigger: CCCCATTGCGCAGGTCCACCAGGCCTTCTGCAAGAA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGGCTGCATCGTCTCCCTaGAGCCAGCTGATGGCCACA +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLAASSP*SQLMAT
Trigger: TGTGGCCATCAGCTGGCTCCAGGGAGACGATGCAGC...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAAGCAGCTGGACCACGTaGTTGAGGGCAGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVSSWTT*LRAGSE
Trigger: CTCTGACCCTGCCCTCAACCACGTGGTCCAGCTGCT...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGTGTTCCAGCAGCTGGTaGGTGCGGGTGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWCSSSW*VRVGLA
Trigger: AGCCAGCCCCACCCGCACCCACCAGCTGCTGGAACA...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGCCACCTCTCCGTGCTTaGTGCTCTGCGTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWPPLRA*CSAWCA
Trigger: GGCGCACCACGCAGAGCACCAAGCACGGAGAGGTGG...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAACCACCTCTCCGTGCTTaGTGCTCTGCGTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEPPLRA*CSAWCA
Trigger: GGCGCACCACGCAGAGCACCAAGCACGGAGAGGTGG...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGGCAGGCCAGCAGGATaGCGGTGGCCCGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPGRPAG*RWPALA
Trigger: AGCGAGAGCGGGCCACCGCCATCCTGCTGGCCTGCC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCATGCCCAGGGGTGCACTaGCCTGAGTGGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPCPGVH*PEWPRS
Trigger: GCTTCTGGGCCACTCAGGCCAGTGCACCCCTGGGCA...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGCCAGGCCCTGGACCATaGGCATCTAGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLPGPGP*ASSDSS
Trigger: GCTGCTGTCACTAGATGCCCATGGTCCAGGGCCTGG...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACAGGGGCTTGGCAGCTTaGGAGCTCCCCCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHRGLAA*ELPLLL
Trigger: TAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCT...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACAGAGGGGCTTGCCGCTaGGGAGGGATTAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHRGACR*GGIRGW
Trigger: CCAACCCCTAATCCCTCCCCAGCGGCAAGCCCCTCT...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CAA 72 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTaGAGCCCCATGGCAGCAGTCAGATGGATCTCAACC +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRV*SPMAAVRWIST
Trigger: GGTTGAGATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTCGTCGCCCAGCTCCGTaGGGGTCTCCATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSRRPAP*GSPWSP
Trigger: TGGAGACCATGGAGACCCTCACGGAGCTGGGCGACG...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGTCAAAGGCTGCTGGATaGTCCTCGTCTGCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLSKAAG*SSSAEW
Trigger: CCACTCCGCAGACGAGGATCATCCAGCAGCCTTTGA...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCTCAAAGGCTGCTGGATaGTCCTCGTCTGCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWISKAAG*SSSAEW
Trigger: CCACTCCGCAGACGAGGATCATCCAGCAGCCTTTGA...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAACCTGCTGCTGAATGGTaGCCGGCTGTACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEPAAEW*PAVPGR
Trigger: CCTCCCAGGTACAGCCGGTCACCATTCAGCAGCAGG...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTACCAGGGTTGGTACTTaGAGGGCAGCCGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGTRVGT*RAAVWI
Trigger: TATCCAGACGGCTGCCCTTCAAGTACCAACCCTGGT...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCAGTCTGGCTCATCTTTaGCCTTTGCATCATCCAATA +
Preference number: 4 (lower is better)
Translates to: RWPALAGRARHPPLRAWCSLAHL*PLHHPI
Trigger: TATTGGATGATGCAAAGGTCAAAGATGAGCCAGACT...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAACACAGAAGAATCCGTaGGCGGTCTACCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPTQKNP*AVYHAQ
Trigger: CTGGGCATGGTAGACCGCTCACGGATTCTTCTGTGT...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGTAGCAGGTCACAGGTaGGCAGCTGGACCACGTGGT +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPVAGHR*AAGPRG
Trigger: ACCACGTGGTCCAGCTGCTCACCTGTGACCTGCTAC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCGCCAGTTCAGCGCCTaGCGCGTGGTAGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMRQFSA*RVVGLP
Trigger: GGGGAGACCTACCACGCGTCAGGCGCTGAACTGGCG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGGTGGAGGGGTGGGCTaGGCCTGGTGGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEGGGVG*AWWSGG
Trigger: GCCTCCTGACCACCAGGCTCAGCCCACCCCTCCACC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGCGCCTCACCGACGGGTaGCACCCGCCGCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMRLTDG*HPPPCL
Trigger: CAAACATGGCGGCGGGTGGCACCCGTCGGTGAGGCG...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS-3UTR GCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTCAAGGGTCTGCAGCGTaGCATTGGCCGTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGQGSAA*HWPFVS
Trigger: TGACACAAACGGCCAATGGCACGCTGCAGACCCTTG...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGGCGCAGCAACTGTCTaGACCGTAGCCGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHGAATV*TVAGAR
Trigger: CCTTGCCCCGGCTACGGTGCAGACAGTTGCTGCGCC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCACCAGGACCGGGACCTaGTGCACCTGTGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSTRTGT*CTCGAA
Trigger: TGCTGCGCCACAGGTGCAGCAGGTCCCGGTCCTGGT...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTACCAGGACCGGGACCTaGTGCACCTGTGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSTRTGT*CTCGAA
Trigger: TGCTGCGCCACAGGTGCAGCAGGTCCCGGTCCTGGT...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGAATGGTCCCACTGCTaGCCACCAGGGTTGGTACTT +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPEWSHC*PPGLVL
Trigger: AAGTACCAACCCTGGTGGGCAGCAGTGGGACCATTC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGTGAGCGGTCTACCATaGCCAGCGCCACAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWVSGLP*PAPQEE
Trigger: CTCCTCCTGTGGCGCTGGGCATGGTAGACCGCTCAC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGCGGGAGGTGGGCAGTaGCCGGCCCAAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMAGGGQ*PAQNCQ
Trigger: CTGGCAGTTTTGGGCCGGGCACTGCCCACCTCCCGC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGGAACAGGCGGATCCTaGAGGAAGCTTCCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPGTGGS*RKLPCD
Trigger: ATCACAGGGAAGCTTCCTGCAGGATCCGCCTGTTCC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGAAGGCCTGGTGGACCTaGGCAATGGGGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWKAWWT*AMGSAG
Trigger: CCCAGCTGACCCCATTGCGCAGGTCCACCAGGCCTT...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGATGGCCACAGTGATTaGAGACGTCCACCACCGACA +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPDGHSD*RRPPPT
Trigger: TGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAAGCTGTGTGCCAGCCTaGGCAGGCTGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGSCVPA*AGCPGP
Trigger: GGGACCTGGGCAGCCTGCGCAGGCTGGCACACAGCT...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGATGGGCGGAAGCTGTGTaGCAGCCTGCGCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGWAEAV*QPAQAA
Trigger: GGCAGCCTGCGCAGGCTGGCACACAGCTTCCGCCCA...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAGAACACCTTGCGGTATaGTGGGCGGAAGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVEHLAV*WAEAVC
Trigger: GCACACAGCTTCCGCCCAGCATACCGCAAGGTGTTC...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGGTGGGGCTGGCTCCTaGCATCAGGCGCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEGGAGS*HQAHGG
Trigger: GCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTTTCGGCCAGCAGCACTaGCCGCTGGCCCGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPFGQQH*PLARGG
Trigger: TCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCGAA...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTCTGCTGGCAGTCGTTaGAGGAGCGCCGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGSAGSR*RSAGRP
Trigger: TGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGCCCAGTTTCTGCCCTaGCACCTATCCTCTCACGCC +
Preference number: 4 (lower is better)
Translates to: GSAGMEDGLHQGALCHFQAQFLP*HLSSHA
Trigger: GGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGC...CTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR GCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGCTTGGGAGCTCCCCCTaGTGCTATCAAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLLGSSP*CYQVRA
Trigger: AGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAAG...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGTCTCCGGGAGGTGCTaGACCTGGGGACCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPVSGRC*TWGPRK
Trigger: TTTTCTGGGTCCCCAGGTGCAGCACCTCCCGGAGAC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCCTGTGCTGGGGCTCCTaGCCACCCTCTGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSLCWGS*PPSAPT
Trigger: GGTTGGAGCAGAGGGTGGGCAGGAGCCCCAGCACAG...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTTTGCCCTGGGTGTGGTaGGAACTGAGGTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGLPWVW*ELRWEK
Trigger: TTTCTCCCACCTCAGTTCCCACCACACCCAGGGCAA...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCTGTGTCAGCACCCGCTaGGCCTGTACTGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPCVSTR*ACTVCT
Trigger: GGTGCAGACAGTACAGGCCCAGCGGGTGCTGACACA...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGTGTGTCAGCACCCGCTaGGCCTGTACTGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GSAGMEDGLHQGALCHFQCVSTR*ACTVCT
Trigger: GGTGCAGACAGTACAGGCCCAGCGGGTGCTGACACA...CTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGTGAGGGCCGGGTTCTaGACCGCAGCCATAACAGGG +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEVRAGF*TAAITG
Trigger: CCCTGTTATGGCTGCGGTCCAGAACCCGGCCCTCAC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGCATTGTGGTCAGAATaGTCCCACTGCTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPALWSE*SHCCPP
Trigger: TGGTGGGCAGCAGTGGGACCATTCTGACCACAATGC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCACTGGCTCAGAGTCAATaGAGTAGGGAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAALAQSQ*SRERSQ
Trigger: CTGGCTTCTCTCCCTACTCCATTGACTCTGAGCCAG...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACTGCTGGTCAGAGTCGTaGGCCCCTCCCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHCWSES*APPHCS
Trigger: GCTGCAGTGGGGAGGGGCCCACGACTCTGACCAGCA...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCTGCTGGTCAGAGTCGTaGGCCCCTCCCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSCWSES*APPHCS
Trigger: GCTGCAGTGGGGAGGGGCCCACGACTCTGACCAGCA...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAACCTGAGTGTGGGTGCTaGTCAGAGTCGTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEPECGC*SESWAP
Trigger: AGGGGCCCACGACTCTGACCAGCACCCACACTCAGG...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGCAAAGCCTGCCTCAGTaGCTGGCGTGGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEQSLPQ*LAWPAG
Trigger: GCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTTTG...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATCCATGAAAAACTTCTaGCCCAGGGGGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPSMKNF*PRGWQS
Trigger: GCTCTGCCACCCCCTGGGCCAGAAGTTTTTCATGGA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTATTGCAGAAGGCCTGGTaGACCTGCGCAATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVLQKAW*TCAMGS
Trigger: TGACCCCATTGCGCAGGTCCACCAGGCCTTCTGCAA...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGCCGACAGATGATGTCTaGACCCAGGGCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLPTDDV*TQGGLE
Trigger: CTCAAGTCCGCCCTGGGTCCAGACATCATCTGTCGG...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATCACTTCCAGGGCCTTaGGGATGCGTTCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPSLPGP*GCVPLW
Trigger: CCAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTAGCAGCTGGACCACGTaGTTGAGGGCAGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSSSWTT*LRAGSE
Trigger: CTCTGACCCTGCCCTCAACCACGTGGTCCAGCTGCT...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGGGTGCGGGTGGGGCTaGCTCCTGCCATCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWGCGWG*LLPSGA
Trigger: TGCGCCTGATGGCAGGAGCCAGCCCCACCCGCACCC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTTGGTGCTCTGCGTaGTGCGCCGCCGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMAWCSA*CAAAGC
Trigger: ACAGCCTGCGGCGGCGCACCACGCAGAGCACCAAGC...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGAGCAGCACTGCCCGCTaGCCCGGGGAGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKSSTAR*PGEERK
Trigger: CTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCT...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCGTCAGGAGGCGGCAATaGCAGTGCCACCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCVRRRQ*QCHHPA
Trigger: AGCTGGGTGGTGGCACTGCCATTGCCGCCTCCTGAC...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCCCAGTCCCCATGGGTaGCTTCATTTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSPSPHG*LHFSQP
Trigger: GGGCTGGGAGAAATGAAGCCACCCATGGGGACTGGG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGCAGCCTGCATCAAGGTaGCCCTGCTGTGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWQPASR*PCCEHP
Trigger: GGGGTGCTCACAGCAGGGCCACCTTGATGCAGGCTG...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGCGTCGCCCAGCTCCGTaGGGGTCTCCATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMRRPAP*GSPWSP
Trigger: TGGAGACCATGGAGACCCTCACGGAGCTGGGCGACG...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGGCTGGGGGCGGGGCTaGAGAATAGGAGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMGWGRG*RIGVAL
Trigger: CAGGGCAACTCCTATTCTTCAGCCCCGCCCCCAGCC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCCCTGCTGCTGAATGGTaGCCGGCTGTACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSPAAEW*PAVPGR
Trigger: CCTCCCAGGTACAGCCGGTCACCATTCAGCAGCAGG...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGGGGCTCAAGCTGCTTaGCTCCCCCAGGTACCTGCT +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGGAQAA*LPQVPA
Trigger: AGCAGGTACCTGGGGGAGTCAAGCAGCTTGAGCCCC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGGATATCGTTTCTCAATaGTATTATGGGTTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWDIVSQ*YYGLSA
Trigger: GGCGGACAACCCATAATATCATTGAGAAACGATATC...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGAGTCTGGCTCATCTTTaGCCTTTGCATCATCCAATA +
Preference number: 4 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWSLAHL*PLHHPI
Trigger: TATTGGATGATGCAAAGGTCAAAGATGAGCCAGACT...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCACTGCGGCCAGAGCCTaGGTGTGGGTGCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSTAARA*VWVLVR
Trigger: TCTGACCAGCACCCACACTCAGGCTCTGGCCGCAGT...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAATCACTGGCTCCCCATaGACCAGCAGCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPITGSP*TSSFTK
Trigger: CTTTGTGAAGCTGCTGGTTCATGGGGAGCCAGTGAT...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGGTGCCTCCAGAAGGTaGCCGAGGAGCGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPGASRR*PRSASV
Trigger: CACACTCGCGCTCCTCGGTCACCTTCTGGAGGCACC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCAGGAAGCTTCCCTGTaGTGTGCAGCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCQEASL*CAAGAA
Trigger: GGCTGCACCAGCTGCACATCACAGGGAAGCTTCCTG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTACCAGCTCCGCTCCATaGAAAACTTCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSTSSAP*KTSGPG
Trigger: CCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGT...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGACCCAGGGCGGACTTaGGCACGGAGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPDPGRT*ARSSWR
Trigger: TCTCCAGGAGCTCCGTGCTCAAGTCCGCCCTGGGTC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTCCACCACCGACAGATaGTGTCTGGACCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGSTTDR*CLDPGR
Trigger: CCGCCCTGGGTCCAGACATCATCTGTCGGTGGTGGA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCATCCACTTTGGTAAAATaGGAGCGCACAGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAASTLVK*ERTAAS
Trigger: CGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGA...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGCTGGACCACGTGGTTaGGGGCAGGGTCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPAGPRG*GQGQRW
Trigger: CCACCTCTGACCCTGCCCTCAACCACGTGGTCCAGC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACGGTGGAGGGGTGGGCTaGGCCTGGTGGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYGGGVG*AWWSGG
Trigger: GCCTCCTGACCACCAGGCTCAGCCCACCCCTCCACC...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCCCCTGGGCCTACCCTaGGCTTGGGCTAACATCCTA +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCPLGLP*AWANIL
Trigger: TAGGATGTTAGCCCAAGCTCAGGGTAGGCCCAGGGG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCCGCCATGTTTGCGTTaGGCCCGGGCGCCGCACAGA +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWPPCLR*ARAPHR
Trigger: TCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCTGCCACTGCTGCCGCTaGTGCTACCACTACCACCAC +
Preference number: 4 (lower is better)
Translates to: AFPGSEACMALQAWKMAFCHCCR*CYHYHH
Trigger: GTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCA...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGTGCTGCTGCCACTGCTaGCGCTGCTGCTACCACTAC +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWCCCHC*RCCYHY
Trigger: GTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCA...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAGGCGCAGCAACTGTCTaGACCGTAGCCGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGGAATV*TVAGAR
Trigger: CCTTGCCCCGGCTACGGTGCAGACAGTTGCTGCGCC...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGGCAGGTTTGTAGGTTaGCGGCAGCAGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPGRFVG*RQQLQN
Trigger: ATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAATCAGGAACAGCACTGTaGTCGGGGCCACACAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSESGTAL*SGPHRL
Trigger: GAGCCTGTGTGGCCCCGAGCACAGTGCTGTTCCTGA...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGCTCCAGCAGGTTCTTaGAGAAGGCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPAPAGS*RRPGGP
Trigger: AGGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAGATGGCCACAGTGATTaGAGACGTCCACCACCGACA +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVDGHSD*RRPPPT
Trigger: TGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATGGCAGAAGGAACTCTaGTGCCCATCTGCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPWQKEL*CPSAFP
Trigger: TGGGAAAGCAGATGGGCAGCAGAGTTCCTTCTGCCA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCCATGCAGGAACACCTTaGGGTATGCTGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPHAGTP*GMLGGS
Trigger: GCTTCCGCCCAGCATACCGCAAGGTGTTCCTGCATG...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCATGCAGGAACACCTTaGGGTATGCTGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSHAGTP*GMLGGS
Trigger: GCTTCCGCCCAGCATACCGCAAGGTGTTCCTGCATG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGCGCACGGTGGCTTCATaGAGGAACACCTTGCGGTAT +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLRTVAS*RNTLRY
Trigger: ATACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCG...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGATGGTGCTCTGCGTGGTaGGCCGCCGCAGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGWCSAW*AAAGCV
Trigger: AACACAGCCTGCGGCGGCGCACCACGCAGAGCACCA...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACCGTGCTTGGTGCTCTaGGTGGTGCGCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTPCLVL*VVRRRR
Trigger: CCTGCGGCGGCGCACCACGCAGAGCACCAAGCACGG...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGATCTGCTGGCAGTCGTTaGAGGAGCGCCGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGSAGSR*RSAGRP
Trigger: TGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGA...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGGGAGCTCCCCCTGCTaGTATCAAGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGGSSPC*YQVRAA
Trigger: GGCAGCCCTGACTTGATAGCAGCAGGGGGAGCTCCC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAAGGCCTGAGGGCAACTaGTCCCTGGTGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSERPEGN*SLVLRD
Trigger: GTCTCTGAGCACCAGGGAGCAGTTGCCCTCAGGCCT...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAAGGCCTGAGGGCAACTaGTCCCTGGTGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPRPEGN*SLVLRD
Trigger: GTCTCTGAGCACCAGGGAGCAGTTGCCCTCAGGCCT...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCAGGCCTGAGGGCAACTaGTCCCTGGTGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFRPEGN*SLVLRD
Trigger: GTCTCTGAGCACCAGGGAGCAGTTGCCCTCAGGCCT...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCTGTGCTGGGGCTCCTaGCCACCCTCTGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMLCWGS*PPSAPT
Trigger: GGTTGGAGCAGAGGGTGGGCAGGAGCCCCAGCACAG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCCAGAGTTGGAGCCTGTaGGGAGGCCGCCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPQSWSL*GGRRGR
Trigger: TCTCCCTCGGCGGCCTCCCCACAGGCTCCAACTCTG...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCCTTGACTTGCAGAGTTaGAGCCTGTGGGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFLDLQS*SLWGGR
Trigger: GCGGCCTCCCCACAGGCTCCAACTCTGCAAGTCAAG...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACCTTGACTTGCAGAGTTaGAGCCTGTGGGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: MHGSAGMEDGLHQGALCHLDLQS*SLWGGR
Trigger: GCGGCCTCCCCACAGGCTCCAACTCTGCAAGTCAAG...GTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGACCTGCTGCACCTGTaGCGCAGCAACTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPDLLHL*RSNCLH
Trigger: GTGCAGACAGTTGCTGCGCCACAGGTGCAGCAGGTC...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGTGAGGGCCGGGTTCTaGACCGCAGCCATAACAGGG +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGVRAGF*TAAITG
Trigger: CCCTGTTATGGCTGCGGTCCAGAACCCGGCCCTCAC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGGAGAGAAGCCAGCCTaGGACCCTGAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWGEKPA*DPESEA
Trigger: AGCCTCTGACTCAGGGTCCCAGGCTGGCTTCTCTCC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCGAGGAGCGCGAGTGTaGCCGGATCACTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWRGARV*PDHWLP
Trigger: GGGGAGCCAGTGATCCGGCCACACTCGCGCTCCTCG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCCTCAGTGGCTGGCGTaGCCCGCCGGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWPQWLA*PAGTGR
Trigger: TCTTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATCAGCTGGGTTCCTCTaGGCACAGTATAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPSAGFL*AQYRLS
Trigger: GGAGAGTCTATACTGTGCCCAGAGGAACCCAGCTGA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGTCACTTCCAGGGCCTTaGGGATGCGTTCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLSLPGP*GCVPLW
Trigger: CCAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGA...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAGGAGTGAGGCATGCATaGCTCTGCAGGCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVGVRHA*LCRHGR
Trigger: TCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCC...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTTCACAGGTGAGCAGCTaGACCACGTGGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSSQVSS*TTWLRA
Trigger: TGCCCTCAACCACGTGGTCCAGCTGCTCACCTGTGA...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCCCCCCACAGCCTGGCTaGCACTGGCCTGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGPPQPG*HWPVFA
Trigger: GGCAAAAACAGGCCAGTGCCAGCCAGGCTGTGGGGG...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACCCCCCACAGCCTGGCTaGCACTGGCCTGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHPPQPG*HWPVFA
Trigger: GGCAAAAACAGGCCAGTGCCAGCCAGGCTGTGGGGG...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGACTGCCCAGGTCCCGTTaGAAGCCCGCCAGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGLPRSR*KPASSA
Trigger: CGCTGAACTGGCGGGCTTCCAACGGGACCTGGGCAG...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTCCATCAGGCGCACGGTaGCTTCATGCAGGAACACCT +
Preference number: 4 (lower is better)
Translates to: AGMEDGLHQGALCHFQGLPSGAR*LHAGTP
Trigger: AGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGG...AAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGCTTGGTGCTCTGCGTaGTGCGCCGCCGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEAWCSA*CAAAGC
Trigger: ACAGCCTGCGGCGGCGCACCACGCAGAGCACCAAGC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGTGCACTGGCCTGAGTaGCCCAGAAGCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMVHWPE*PRSLGR
Trigger: CCTGCCGAGGCTTCTGGGCCACTCAGGCCAGTGCAC...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGGTCCCCAGTCCCCATaGGTGGCTTCATTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPGPQSP*VASFLP
Trigger: TGGGAGAAATGAAGCCACCCATGGGGACTGGGGACC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAGAGAAAGAAAGCAGGTaGGGTCCAAGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVEKESR*GPSTPQ
Trigger: CTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTC...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCCTGCTGCTGAATGGTaGCCGGCTGTACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMPAAEW*PAVPGR
Trigger: CCTCCCAGGTACAGCCGGTCACCATTCAGCAGCAGG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAGGGGCTCAAGCTGCTTaGCTCCCCCAGGTACCTGCT +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGGAQAA*LPQVPA
Trigger: AGCAGGTACCTGGGGGAGTCAAGCAGCTTGAGCCCC...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGGGGCTCAAGCTGCTTaGCTCCCCCAGGTACCTGCT +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMGAQAA*LPQVPA
Trigger: AGCAGGTACCTGGGGGAGTCAAGCAGCTTGAGCCCC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTATGGCGTCTGTCCCCATaGCCAGGTCTTTCAATTCGA +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVWRLSP*PGLSIR
Trigger: TCGAATTGAAAGACCTGGTCATGGGGACAGACGCCA...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACTGGAAGACTTTCTTaGGCAGCCAGCGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: AFPGSEACMALQAWKMAFTGRLS*AASAPG
Trigger: GCCTGGTGCGCTGGCTGCTCAAGAAAGTCTTCCAGT...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAACCAGCTCCGCTCCATaGAAAACTTCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPTSSAP*KTSGPG
Trigger: CCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGT...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTCCACCACCGACAGATaGTGTCTGGACCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPSTTDR*CLDPGR
Trigger: CCGCCCTGGGTCCAGACATCATCTGTCGGTGGTGGA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCTGCTTTCCCAGGGAGTaGGGCATGCATGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AFPGSEACMALQAWKMAFCFPRE*GMHGSA
Trigger: TGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCA...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGGTAGCAGGTCACAGGTaGGCAGCTGGACCACGTGGT +
Preference number: 4 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQVAGHR*AAGPRG
Trigger: ACCACGTGGTCCAGCTGCTCACCTGTGACCTGCTAC...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTTGCCACTGCTGCCGCTaGTGCTACCACTACCACCAC +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSCHCCR*CYHYHH
Trigger: GTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCA...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGCCGGGGCAAGGGTCTaGAGCGTGCCATTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWAGARV*SVPLAV
Trigger: AACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGGCGCAGCAACTGTCTaGACCGTAGCCGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPGAATV*TVAGAR
Trigger: CCTTGCCCCGGCTACGGTGCAGACAGTTGCTGCGCC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAGTGAGCGGTCTACCATaGCCAGCGCCACAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGVSGLP*PAPQEE
Trigger: CTCCTCCTGTGGCGCTGGGCATGGTAGACCGCTCAC...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGGCGAGATCCAGATCTaGCTGTTTCCGGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEGEIQI*LFPVPP
Trigger: TGGAGGCACCGGAAACAGGCAGATCTGGATCTCGCC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGGGCAGGTTTGTAGGTTaGCGGCAGCAGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLGRFVG*RQQLQN
Trigger: ATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCC...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTTGGGATCTTCTCCTCTaGACATTCAGCCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGWDLLL*TFSQVH
Trigger: GTGAACCTGGCTGAATGTGCAGAGGAGAAGATCCCA...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGCTCCAGCAGGTTCTTaGAGAAGGCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPAPAGS*RRPGGP
Trigger: AGGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGC...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCATGAGAGCGCACAGCTaGATCGTCTCCCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCMRAHS*IVSLEP
Trigger: TGGCTCCAGGGAGACGATGCAGCTGTGCGCTCTCAT...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACAGCTGTGTGCCAGCCTaGGCAGGCTGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYSCVPA*AGCPGP
Trigger: GGGACCTGGGCAGCCTGCGCAGGCTGGCACACAGCT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCTTGGGAGCTCCCCCTaGTGCTATCAAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCLGSSP*CYQVRA
Trigger: AGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAAG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGCCAACATTATTTCATaGATCCGCAGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSAGMEDGLHQGALCHFQANIIS*IRRPAP
Trigger: GGGGGCAGGCCTGCGGATGCATGAAATAATGTTGGC...CTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGTGACCGGCTGTACCTaGGAGGATGTCACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFVTGCT*EDVTRL
Trigger: AAGCCTGGTGACATCCTCCCAGGTACAGCCGGTCAC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGTGTGTCAGCACCCGCTaGGCCTGTACTGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQCVSTR*ACTVCT
Trigger: GGTGCAGACAGTACAGGCCCAGCGGGTGCTGACACA...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGACCTGCTGCACCTGTaGCGCAGCAACTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHDLLHL*RSNCLH
Trigger: GTGCAGACAGTTGCTGCGCCACAGGTGCAGCAGGTC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGCTGGCTCAGAGTCAATaGAGTAGGGAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLLAQSQ*SRERSQ
Trigger: CTGGCTTCTCTCCCTACTCCATTGACTCTGAGCCAG...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGTGGCCCGCCGGCACTaGAAGACTTTCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGVARRH*KTFLSS
Trigger: GCTGCTCAAGAAAGTCTTCCAGTGCCGGCGGGCCAC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTATGGCAGCAGTCAGATaGATCTCAACCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGMAAVR*ISTSVL
Trigger: GAGCACACTGGTTGAGATCCATCTGACTGCTGCCAT...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAACGCAATGGGGTCAGCTaGGTTCCTCTGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSERNGVS*VPLGTV
Trigger: TACTGTGCCCAGAGGAACCCAGCTGACCCCATTGCG...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGGTGGACCTGCGCAATaGGGTCAGCTGGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHGGPAQ*GQLGSS
Trigger: AGAGGAACCCAGCTGACCCCATTGCGCAGGTCCACC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCTTCTTGCAGAAGGCCTaGTGGACCTGCGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCFLQKA*WTCAMG
Trigger: CCCCATTGCGCAGGTCCACCAGGCCTTCTGCAAGAA...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGGAGCTCCTGGAGAGTaGGGGGCTCATAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPGAPGE*GAHNPH
Trigger: GTGGGGGTTATGAGCCCCCCACTCTCCAGGAGCTCC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTATGGCTCTGCAGGCATaGAAGATGGCCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSMALQA*KMAFTR
Trigger: CCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCAT...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACAGGCTGCTCCATAGGTaGCCACTGGCCCTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHRLLHR*PLALSQ
Trigger: TTGCGAGAGGGCCAGTGGCCACCTATGGAGCAGCCT...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAGCAGCTGGACCACGTaGTTGAGGGCAGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGSSWTT*LRAGSE
Trigger: CTCTGACCCTGCCCTCAACCACGTGGTCCAGCTGCT...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACCAGCCTGGCTGGCACTaGCCTGTTTTTGCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHQPGWH*PVFARA
Trigger: CGCTCTGGCAAAAACAGGCCAGTGCCAGCCAGGCTG...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCACCATCAGGCGCACGGTaGCTTCATGCAGGAACACCT +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPPSGAR*LHAGTP
Trigger: AGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGG...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAAGGGGCTTGGCAGCTTaGGAGCTCCCCCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGRGLAA*ELPLLL
Trigger: TAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCT...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGAGGGGCTTGGCAGCTTaGGAGCTCCCCCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMRGLAA*ELPLLL
Trigger: TAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCT...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGATTTCTCCCAGCCCCCTaGGCCTACCCTGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGFLPAP*AYPELG
Trigger: CCCAAGCTCAGGGTAGGCCCAGGGGGCTGGGAGAAA...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGGTCCCCAGTCCCCATaGGTGGCTTCATTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWGPQSP*VASFLP
Trigger: TGGGAGAAATGAAGCCACCCATGGGGACTGGGGACC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGAACCACTGTTAAGTTaGGGACAGTCTGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAEPLLS*GQSVLW
Trigger: CCACAGTACAGACTGTCCCCAACTTAACAGTGGTTC...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAAGAGGGGCTTGCCGCTaGGGAGGGATTAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGRGACR*GGIRGW
Trigger: CCAACCCCTAATCCCTCCCCAGCGGCAAGCCCCTCT...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGGCTGGGGGCGGGGCTaGAGAATAGGAGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTGWGRG*RIGVAL
Trigger: CAGGGCAACTCCTATTCTTCAGCCCCGCCCCCAGCC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGTCTGCACCTGCTGCTaGATGGTGACCGGCTGTACC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPVCTCC*MVTGCT
Trigger: GGTACAGCCGGTCACCATTCAGCAGCAGGTGCAGAC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTCTGTCTTGATGATCTaGGGCTGGACCAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGSVLMI*GWTRTG
Trigger: CCCGGTCCTGGTCCAGCCTCAGATCATCAAGACAGA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGACTGCGGCCAGAGCCTaGGTGTGGGTGCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTETAARA*VWVLVR
Trigger: TCTGACCAGCACCCACACTCAGGCTCTGGCCGCAGT...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCATCACTGGCTCCCCATaGACCAGCAGCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPITGSP*TSSFTK
Trigger: CTTTGTGAAGCTGCTGGTTCATGGGGAGCCAGTGAT...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTCTCCACACCGGGTCTTaGGCCCCATGGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPLHTGS*APWQQS
Trigger: TGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAG...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGACCCAGGGCGGACTTaGGCACGGAGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTDPGRT*ARSSWR
Trigger: TCTCCAGGAGCTCCGTGCTCAAGTCCGCCCTGGGTC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTATCCACTTTGGTAAAATaGGAGCGCACAGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVSTLVK*ERTAAS
Trigger: CGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGA...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGCCCCTGGGCCTACCCTaGGCTTGGGCTAACATCCTA +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMPLGLP*AWANIL
Trigger: TAGGATGTTAGCCCAAGCTCAGGGTAGGCCCAGGGG...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGATGCTGCTGCCACTGCTaGCGCTGCTGCTACCACTAC +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGCCCHC*RCCYHY
Trigger: GTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCA...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGTGCTGCCCCTGCCATTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTECCPCH*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCA...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACGGAGAAACCTTGACTTaGAGAGTTGGAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHGETLT*RVGACG
Trigger: CCCACAGGCTCCAACTCTGCAAGTCAAGGTTTCTCC...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGCAAGGGTCTGCAGCGTaGCATTGGCCGTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWQGSAA*HWPFVS
Trigger: TGACACAAACGGCCAATGGCACGCTGCAGACCCTTG...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAATCAGAATGGTCCCACTaGTGCCCACCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSESEWSH*CPPGLV
Trigger: TACCAACCCTGGTGGGCAGCAGTGGGACCATTCTGA...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAAGAACGCCAGACTTGTaGATCTTGGCGTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSERTPDL*ILASVP
Trigger: GGGGACAGACGCCAAGATGCACAAGTCTGGCGTTCT...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCAGAACGCCAGACTTGTaGATCTTGGCGTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFRTPDL*ILASVP
Trigger: GGGGACAGACGCCAAGATGCACAAGTCTGGCGTTCT...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCCATTGTCCACCAGACTaGCTAGGTCGATGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIHCPPD*LGRCPL
Trigger: TAAAGGGCATCGACCTAGGCAGTCTGGTGGACAATG...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGAGCCTGAGTGTGGGTaGTGGTCAGAGTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWEPECG*WSESWA
Trigger: GGCCCACGACTCTGACCAGCACCCACACTCAGGCTC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTTCTGCCTGTTTCCGGTaGCTCCAGAAGGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSSACFR*LQKVTE
Trigger: CTCGGTCACCTTCTGGAGGCACCGGAAACAGGCAGA...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACTTCGTCTTCAAAGCCTaGCTCAGTGGCTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHFVFKA*LSGWRG
Trigger: GCCACGCCAGCCACTGAGGCAGGCTTTGAAGACGAA...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTTCGTCTTCAAAGCCTaGCTCAGTGGCTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGFVFKA*LSGWRG
Trigger: GCCACGCCAGCCACTGAGGCAGGCTTTGAAGACGAA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGAAGGCCTGGTGGACCTaGGCAATGGGGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEKAWWT*AMGSAG
Trigger: CCCAGCTGACCCCATTGCGCAGGTCCACCAGGCCTT...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGTGGCAGAAGGAACTCTaGTGCCCATCTGCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GSAGMEDGLHQGALCHFQWQKEL*CPSAFP
Trigger: TGGGAAAGCAGATGGGCAGCAGAGTTCCTTCTGCCA...CTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATGGTGCTCTGCGTGGTaGGCCGCCGCAGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTWCSAW*AAAGCV
Trigger: AACACAGCCTGCGGCGGCGCACCACGCAGAGCACCA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGCATCCACCTCTCCGTaGTTGGTGCTCTGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPASTSP*LVLCVV
Trigger: CACCACGCAGAGCACCAAGCACGGAGAGGTGGATGC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATCTGCTGGCAGTCGTTaGAGGAGCGCCGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTSAGSR*RSAGRP
Trigger: TGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCCTTGGGAGCTCCCCCTaGTGCTATCAAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSLGSSP*CYQVRA
Trigger: AGCCCTGACTTGATAGCAGCAGGGGGAGCTCCCAAG...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGCAACTGCTCCCTGGTaGTCAGAGACTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMATAPW*SETAVP
Trigger: GGGGACAGCAGTCTCTGAGCACCAGGGAGCAGTTGC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGCAACTGCTCCCTGGTaGTCAGAGACTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPATAPW*SETAVP
Trigger: GGGGACAGCAGTCTCTGAGCACCAGGGAGCAGTTGC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGCCAACATTATTTCATaGATCCGCAGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEANIIS*IRRPAP
Trigger: GGGGGCAGGCCTGCGGATGCATGAAATAATGTTGGC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCAAATATATACAGATATaGCTCAACTTACCATGGGGT +
Preference number: 4 (lower is better)
Translates to: RWPALAGRARHPPLRAWCKYIQI*LNLPWG
Trigger: ACCCCATGGTAAGTTGAGGCATATCTGTATATATTT...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGGTCTCCGGGAGGTGCTaGACCTGGGGACCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKVSGRC*TWGPRK
Trigger: TTTTCTGGGTCCCCAGGTGCAGCACCTCCCGGAGAC...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGATAACATTCCAGCCTaGATCAAGGTGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPDNIPA*IKVALL
Trigger: CAGCAGGGCCACCTTGATGCAGGCTGGAATGTTATC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTGAAGGTAATGTGACCTaGGTGAATGACCGTTGCACT +
Preference number: 4 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGEGNVT*VNDRCT
Trigger: AGTGCAACGGTCATTCACCCAGGTCACATTACCTTC...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGACTTGACTTGCAGAGTTaGAGCCTGTGGGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGLDLQS*SLWGGR
Trigger: GCGGCCTCCCCACAGGCTCCAACTCTGCAAGTCAAG...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGAGTTGCCCTGGGTGTaGTGGGAACTGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMELPWV*WELRWE
Trigger: CTCCCACCTCAGTTCCCACCACACCCAGGGCAACTC...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGAGTTGCCCTGGGTGTaGTGGGAACTGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPELPWV*WELRWE
Trigger: CTCCCACCTCAGTTCCCACCACACCCAGGGCAACTC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGTGACCGGCTGTACCTaGGAGGATGTCACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHVTGCT*EDVTRL
Trigger: AAGCCTGGTGACATCCTCCCAGGTACAGCCGGTCAC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACTCTGCAGCGTGCCATTaGCCGTTTGTGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHSAACH*PFVSAP
Trigger: GGGTGCTGACACAAACGGCCAATGGCACGCTGCAGA...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACGCATTGTGGTCAGAATaGTCCCACTGCTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: MHGSAGMEDGLHQGALCHALWSE*SHCCPP
Trigger: TGGTGGGCAGCAGTGGGACCATTCTGACCACAATGC...GTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCCTGAGTGTGGGTGCTaGTCAGAGTCGTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWPECGC*SESWAP
Trigger: AGGGGCCCACGACTCTGACCAGCACCCACACTCAGG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGTGGCCCGCCGGCACTaGAAGACTTTCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPVARRH*KTFLSS
Trigger: GCTGCTCAAGAAAGTCTTCCAGTGCCGGCGGGCCAC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCTCCATGAAAAACTTCTaGCCCAGGGGGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AFPGSEACMALQAWKMAFSMKNF*PRGWQS
Trigger: GCTCTGCCACCCCCTGGGCCAGAAGTTTTTCATGGA...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCCGCAATGGGGTCAGCTaGGTTCCTCTGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSRNGVS*VPLGTV
Trigger: TACTGTGCCCAGAGGAACCCAGCTGACCCCATTGCG...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGCTGCATCGTCTCCCTaGAGCCAGCTGATGGCCACA +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPAASSP*SQLMAT
Trigger: TGTGGCCATCAGCTGGCTCCAGGGAGACGATGCAGC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCTCACAGGTGAGCAGCTaGACCACGTGGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSSQVSS*TTWLRA
Trigger: TGCCCTCAACCACGTGGTCCAGCTGCTCACCTGTGA...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTCACAGGTGAGCAGCTaGACCACGTGGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGSQVSS*TTWLRA
Trigger: TGCCCTCAACCACGTGGTCCAGCTGCTCACCTGTGA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTCCCCCACAGCCTGGCTaGCACTGGCCTGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPPPQPG*HWPVFA
Trigger: GGCAAAAACAGGCCAGTGCCAGCCAGGCTGTGGGGG...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGTCAGGAGGCGGCAATaGCAGTGCCACCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEVRRRQ*QCHHPA
Trigger: AGCTGGGTGGTGGCACTGCCATTGCCGCCTCCTGAC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACAAATCGAGAGAGAGGTaGAGGGGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHKSRER*RGGLSL
Trigger: CAGGCTCAGCCCACCCCTCCACCTCTCTCTCGATTT...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGTGCACTGGCCTGAGTaGCCCAGAAGCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTVHWPE*PRSLGR
Trigger: CCTGCCGAGGCTTCTGGGCCACTCAGGCCAGTGCAC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCCAGGCCCTGGACCATaGGCATCTAGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMPGPGP*ASSDSS
Trigger: GCTGCTGTCACTAGATGCCCATGGTCCAGGGCCTGG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCCCCAGTCCCCATGGGTaGCTTCATTTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPPSPHG*LHFSQP
Trigger: GGGCTGGGAGAAATGAAGCCACCCATGGGGACTGGG...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGCCCAGTCCCCATGGGTaGCTTCATTTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMPSPHG*LHFSQP
Trigger: GGGCTGGGAGAAATGAAGCCACCCATGGGGACTGGG...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCAGCCTGCATCAAGGTaGCCCTGCTGTGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWQPASR*PCCEHP
Trigger: GGGGTGCTCACAGCAGGGCCACCTTGATGCAGGCTG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTCAAAGGCTGCTGGATaGTCCTCGTCTGCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPSKAAG*SSSAEW
Trigger: CCACTCCGCAGACGAGGATCATCCAGCAGCCTTTGA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAATGGCGTCTGTCCCCATaGCCAGGTCTTTCAATTCGA +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEWRLSP*PGLSIR
Trigger: TCGAATTGAAAGACCTGGTCATGGGGACAGACGCCA...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGACTGGAAGACTTTCTTaGGCAGCCAGCGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMTGRLS*AASAPG
Trigger: GCCTGGTGCGCTGGCTGCTCAAGAAAGTCTTCCAGT...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCAGGAAGCTTCCCTGTaGTGTGCAGCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWQEASL*CAAGAA
Trigger: GGCTGCACCAGCTGCACATCACAGGGAAGCTTCCTG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGACCAGCTCCGCTCCATaGAAAACTTCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMTSSAP*KTSGPG
Trigger: CCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGT...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGCCTTCTTCTTGGCCTaGGGTTTCACCAAGGACTCT +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEAFFLA*GFTKDS
Trigger: AGAGTCCTTGGTGAAACCTCAGGCCAAGAAGAAGGC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGTGCTTTCCCAGGGAGTaGGGCATGCATGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMCFPRE*GMHGSA
Trigger: TGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCA...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGTGCTTTCCCAGGGAGTaGGGCATGCATGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKCFPRE*GMHGSA
Trigger: TGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCA...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTACCCTCTGCCCACTCTaGAAAGAGGGGCTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPTLCPL*KEGLAA
Trigger: AGCGGCAAGCCCCTCTTTTCAGAGTGGGCAGAGGGT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCACTGGGACACAGTGACTaGTTGATTGAACATCAAGAA +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAALGHSD*LIEHQE
Trigger: TTCTTGATGTTCAATCAATCAGTCACTGTGTCCCAG...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAATGGGTGAATGACCGTTaGACTGAAGGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEWVNDR*TEGSTA
Trigger: AGCTGTGGACCCTTCAGTGCAACGGTCATTCACCCA...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACTCAGAATGGTCCCACTaGTGCCCACCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHSEWSH*CPPGLV
Trigger: TACCAACCCTGGTGGGCAGCAGTGGGACCATTCTGA...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACACTCCCCCAGGTACCTaGTTAATGGGCACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHTPPGT*LMGTFS
Trigger: AGAGAAAGTGCCCATTAAGCAGGTACCTGGGGGAGT...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCACTCCCCCAGGTACCTaGTTAATGGGCACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPTPPGT*LMGTFS
Trigger: AGAGAAAGTGCCCATTAAGCAGGTACCTGGGGGAGT...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCGACTGCCTAGGTCGATaGCCTTTAGAAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIDCLGR*PLEACS
Trigger: AGAACAAGCTTCTAAAGGGCATCGACCTAGGCAGTC...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGTCTGCCTGTTTCCGGTaGCTCCAGAAGGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMSACFR*LQKVTE
Trigger: CTCGGTCACCTTCTGGAGGCACCGGAAACAGGCAGA...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGTTGCCGGCAGCAGCTaGAAAATCTCCTCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPVAGSS*KISSGE
Trigger: CTCGCCAGAGGAGATTTTGCAGCTGCTGCCGGCAAC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361204.9
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTTCGTCTTCAAAGCCTaGCTCAGTGGCTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPFVFKA*LSGWRG
Trigger: GCCACGCCAGCCACTGAGGCAGGCTTTGAAGACGAA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTGATGGCCACAGTGATTaGAGACGTCCACCACCGACA +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSDGHSD*RRPPPT
Trigger: TGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCATGAGAGCGCACAGCTaGATCGTCTCCCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPMRAHS*IVSLEP
Trigger: TGGCTCCAGGGAGACGATGCAGCTGTGCGCTCTCAT...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCGGTGGGGCTGGCTCCTaGCATCAGGCGCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFGGAGS*HQAHGG
Trigger: GCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACC...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGCATCCACCTCTCCGTaGTTGGTGCTCTGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEASTSP*LVLCVV
Trigger: CACCACGCAGAGCACCAAGCACGGAGAGGTGGATGC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGCCCAGTTTCTGCCCTaGCACCTATCCTCTCACGCC +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEAQFLP*HLSSHA
Trigger: GGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCATTAGGGGTTGGTCCCTaGCATCCTGGTTTATTTATT +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAALGVGP*HPGLFI
Trigger: AATAAATAAACCAGGATGGCAGGGACCAACCCCTAA...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGTCTCCGGGAGGTGCTaGACCTGGGGACCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEVSGRC*TWGPRK
Trigger: TTTTCTGGGTCCCCAGGTGCAGCACCTCCCGGAGAC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGCTCCTGCCCACCCTCTaGTCCAACCAGCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTELLPTL*SNQPED
Trigger: ATCCTCAGGCTGGTTGGAGCAGAGGGTGGGCAGGAG...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTTGCCCTGGGTGTGGTaGGAACTGAGGTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGLPWVW*ELRWEK
Trigger: TTTCTCCCACCTCAGTTCCCACCACACCCAGGGCAA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCAGTGGTGCTGAATGTTaGCGTGATCATTACCGTCTG +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWISGAEC*RDHYRL
Trigger: CAGACGGTAATGATCACGCCAACATTCAGCACCACT...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGTGAGGGCCGGGTTCTaGACCGCAGCCATAACAGGG +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTVRAGF*TAAITG
Trigger: CCCTGTTATGGCTGCGGTCCAGAACCCGGCCCTCAC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGCTGCCCACCAGGGTTaGTACTTGAAGGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEAAHQG*YLKGSR
Trigger: ACGGCTGCCCTTCAAGTACCAACCCTGGTGGGCAGC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGGAGAGAAGCCAGCCTaGGACCCTGAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPGEKPA*DPESEA
Trigger: AGCCTCTGACTCAGGGTCCCAGGCTGGCTTCTCTCC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCTGGCTCAGAGTCAATaGAGTAGGGAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCLAQSQ*SRERSQ
Trigger: CTGGCTTCTCTCCCTACTCCATTGACTCTGAGCCAG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGATTGCAGAAGGCCTGGTaGACCTGCGCAATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGLQKAW*TCAMGS
Trigger: TGACCCCATTGCGCAGGTCCACCAGGCCTTCTGCAA...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGTTGCAGAAGGCCTGGTaGACCTGCGCAATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMLQKAW*TCAMGS
Trigger: TGACCCCATTGCGCAGGTCCACCAGGCCTTCTGCAA...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCCGACAGATGATGTCTaGACCCAGGGCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMPTDDV*TQGGLE
Trigger: CTCAAGTCCGCCCTGGGTCCAGACATCATCTGTCGG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCCCGACAGATGATGTCTaGACCCAGGGCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPPTDDV*TQGGLE
Trigger: CTCAAGTCCGCCCTGGGTCCAGACATCATCTGTCGG...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGTCCATAGGTGGCCACTaGCCCTCTCGCAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMSIGGH*PSRNGR
Trigger: TCTGCCATTGCGAGAGGGCCAGTGGCCACCTATGGA...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGAGGCTGCTCCATAGGTaGCCACTGGCCCTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWRLLHR*PLALSQ
Trigger: TTGCGAGAGGGCCAGTGGCCACCTATGGAGCAGCCT...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGCAGCCTGGCTGGCACTaGCCTGTTTTTGCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEQPGWH*PVFARA
Trigger: CGCTCTGGCAAAAACAGGCCAGTGCCAGCCAGGCTG...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCAGCCTGGCTGGCACTaGCCTGTTTTTGCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWQPGWH*PVFARA
Trigger: CGCTCTGGCAAAAACAGGCCAGTGCCAGCCAGGCTG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCCATCAGGCGCACGGTaGCTTCATGCAGGAACACCT +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMPSGAR*LHAGTP
Trigger: AGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCGGCAGGCCAGCAGGATaGCGGTGGCCCGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFGRPAG*RWPALA
Trigger: AGCGAGAGCGGGCCACCGCCATCCTGCTGGCCTGCC...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTCTCAGCCTCGCATCATaGCAAACCCAAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSLSLAS*QTQAHW
Trigger: CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAG...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGGAGGGATTAGGGGTTaGTCCCTGCCATCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHGGIRG*SLPSWF
Trigger: AAACCAGGATGGCAGGGACCAACCCCTAATCCCTCC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTGAGAAAGAAAGCAGGTaGGGTCCAAGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSEKESR*GPSTPQ
Trigger: CTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTC...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CAA 72 bp TCAGCTGGGTTCCTCTGGGCACAGTATAGACTCTCCTaGGCAGCTGACTTCACAGACCAGCTCCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SAGFLWAQYRLS*AADFTDQLRSM
Trigger: CATGGAGCGGAGCTGGTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACTGTGCCCAGAGGAACCCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
3UTR CAA 72 bp TTCACCAAGGACTCTATAGCTCGCTCCAGCAGGTTCTaGCAGAAGGCCTGGTGGACCTGCGCAATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FTKDSIARSSRF*QKAWWTCAMGS
Trigger: TGACCCCATTGCGCAGGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGCGAGCTATAGAGTCCTTGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGAGGTGGGAGAAACCTTaGCTTGCAGAGTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQRWEKP*LAELEP
Trigger: AGGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCT...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGTCTGCACCTGCTGCTaGATGGTGACCGGCTGTACC +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTVCTCC*MVTGCT
Trigger: GGTACAGCCGGTCACCATTCAGCAGCAGGTGCAGAC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCACCAGGGTTGGTACTTaGAGGGCAGCCGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPTRVGT*RAAVWI
Trigger: TATCCAGACGGCTGCCCTTCAAGTACCAACCCTGGT...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAACCAGGGTTGGTACTTaGAGGGCAGCCGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGTRVGT*RAAVWI
Trigger: TATCCAGACGGCTGCCCTTCAAGTACCAACCCTGGT...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGTGGCGTCTGTCCCCATaGCCAGGTCTTTCAATTCGA +
Preference number: 4 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQWRLSP*PGLSIR
Trigger: TCGAATTGAAAGACCTGGTCATGGGGACAGACGCCA...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATCACTGGCTCCCCATaGACCAGCAGCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSITGSP*TSSFTK
Trigger: CTTTGTGAAGCTGCTGGTTCATGGGGAGCCAGTGAT...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACAGGAAGCTTCCCTGTaGTGTGCAGCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTQEASL*CAAGAA
Trigger: GGCTGCACCAGCTGCACATCACAGGGAAGCTTCCTG...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAATCCACTTTGGTAAAATaGGAGCGCACAGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSESTLVK*ERTAAS
Trigger: CGATGCAGCTGTGCGCTCTCATTTTACCAAAGTGGA...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAAGGGGTGCACTGGCCTaGGTGGCCCAGAAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRRGALA*VAQKPR
Trigger: CCGAGGCTTCTGGGCCACTCAGGCCAGTGCACCCCT...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAAAACATGGTTTAAGTTaGACCACTGTTAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAKHGLS*TTVKLG
Trigger: CCCCAACTTAACAGTGGTTCAACTTAAACCATGTTT...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATGCCACTGCTGCCGCTaGTGCTACCACTACCACCAC +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTCHCCR*CYHYHH
Trigger: GTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGGAGAAACCTTGACTTaGAGAGTTGGAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGGETLT*RVGACG
Trigger: CCCACAGGCTCCAACTCTGCAAGTCAAGGTTTCTCC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTTGGTATATCAAAGGCTaGTGGATGATCCTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSWYIKG*WMILVC
Trigger: GCAGACGAGGATCATCCAGCAGCCTTTGATATACCA...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCCAAGGGTCTGCAGCGTaGCATTGGCCGTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPQGSAA*HWPFVS
Trigger: TGACACAAACGGCCAATGGCACGCTGCAGACCCTTG...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAGAATGGTCCCACTGCTaGCCACCAGGGTTGGTACTT +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGEWSHC*PPGLVL
Trigger: AAGTACCAACCCTGGTGGGCAGCAGTGGGACCATTC...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGTCAGAATGGTCCCACTaGTGCCCACCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMSEWSH*CPPGLV
Trigger: TACCAACCCTGGTGGGCAGCAGTGGGACCATTCTGA...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGACTGCCTAGGTCGATaGCCTTTAGAAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GSAGMEDGLHQGALCHFQDCLGR*PLEACS
Trigger: AGAACAAGCTTCTAAAGGGCATCGACCTAGGCAGTC...CTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR GCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCATTGTCCACCAGACTaGCTAGGTCGATGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCHCPPD*LGRCPL
Trigger: TAAAGGGCATCGACCTAGGCAGTCTGGTGGACAATG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCGCGGGAGGTGGGCAGTaGCCGGCCCAAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFAGGGQ*PAQNCQ
Trigger: CTGGCAGTTTTGGGCCGGGCACTGCCCACCTCCCGC...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAATGGGATCTTCTCCTCTaGACATTCAGCCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEWDLLL*TFSQVH
Trigger: GTGAACCTGGCTGAATGTGCAGAGGAGAAGATCCCA...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCTGGGATCTTCTCCTCTaGACATTCAGCCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFWDLLL*TFSQVH
Trigger: GTGAACCTGGCTGAATGTGCAGAGGAGAAGATCCCA...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGGATCTCAACCAGTGTaGTCGGTGGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGGSQPV*SVGSSP
Trigger: AGGAGAAGATCCCACCGAGCACACTGGTTGAGATCC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACTCAGGAACAGCACTGTaGTCGGGGCCACACAGGCTC +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYSGTAL*SGPHRL
Trigger: GAGCCTGTGTGGCCCCGAGCACAGTGCTGTTCCTGA...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAAGGCATGCATGGCTCTaGAGGCATGGAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGRHAWL*RHGRWP
Trigger: AGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCT...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACTGGCAGAAGGAACTCTaGTGCCCATCTGCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHWQKEL*CPSAFP
Trigger: TGGGAAAGCAGATGGGCAGCAGAGTTCCTTCTGCCA...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGAACACCTTGCGGTATaGTGGGCGGAAGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEEHLAV*WAEAVC
Trigger: GCACACAGCTTCCGCCCAGCATACCGCAAGGTGTTC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGAACACCTTGCGGTATaGTGGGCGGAAGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWEHLAV*WAEAVC
Trigger: GCACACAGCTTCCGCCCAGCATACCGCAAGGTGTTC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGCGCACGGTGGCTTCATaGAGGAACACCTTGCGGTAT +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMRTVAS*RNTLRY
Trigger: ATACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCG...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGCATCCACCTCTCCGTaGTTGGTGCTCTGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTASTSP*LVLCVV
Trigger: CACCACGCAGAGCACCAAGCACGGAGAGGTGGATGC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCATTAGGGGTTGGTCCCTaGCATCCTGGTTTATTTATT +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPLGVGP*HPGLFI
Trigger: AATAAATAAACCAGGATGGCAGGGACCAACCCCTAA...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGATAACATTCCAGCCTaGATCAAGGTGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGDNIPA*IKVALL
Trigger: CAGCAGGGCCACCTTGATGCAGGCTGGAATGTTATC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAAAAGCTCTCCGGTTATaGCATGTGCTAAAGGCTATT +
Preference number: 4 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPKALRL*HVLKAI
Trigger: AATAGCCTTTAGCACATGGCATAACCGGAGAGCTTT...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGAAGGTAATGTGACCTaGGTGAATGACCGTTGCACT +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSEGNVT*VNDRCT
Trigger: AGTGCAACGGTCATTCACCCAGGTCACATTACCTTC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTTGCCCTGGGTGTGGTaGGAACTGAGGTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPLPWVW*ELRWEK
Trigger: TTTCTCCCACCTCAGTTCCCACCACACCCAGGGCAA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTAGTGGTGCTGAATGTTaGCGTGATCATTACCGTCTG +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSSGAEC*RDHYRL
Trigger: CAGACGGTAATGATCACGCCAACATTCAGCACCACT...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGTGACCGGCTGTACCTaGGAGGATGTCACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWVTGCT*EDVTRL
Trigger: AAGCCTGGTGACATCCTCCCAGGTACAGCCGGTCAC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTTCTGCAGCGTGCCATTaGCCGTTTGTGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPSAACH*PFVSAP
Trigger: GGGTGCTGACACAAACGGCCAATGGCACGCTGCAGA...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGCTGCCCACCAGGGTTaGTACTTGAAGGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTAAHQG*YLKGSR
Trigger: ACGGCTGCCCTTCAAGTACCAACCCTGGTGGGCAGC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGCACAGGAGGAGAGTCTaGCTCATCTTTGACCTTTGC +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWHRRRV*LIFDLC
Trigger: GCAAAGGTCAAAGATGAGCCAGACTCTCCTCCTGTG...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACAGTATAGACTCTCCTTaGCAGCTGACTTCACAGACC +
Preference number: 4 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHSIDSP*QLTSQT
Trigger: GGTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACT...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACTCAGCTGGGTTCCTCTaGGCACAGTATAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHSAGFL*AQYRLS
Trigger: GGAGAGTCTATACTGTGCCCAGAGGAACCCAGCTGA...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACGGTGGACCTGCGCAATaGGGTCAGCTGGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYGGPAQ*GQLGSS
Trigger: AGAGGAACCCAGCTGACCCCATTGCGCAGGTCCACC...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCATGGCTCTGCAGGCATaGAAGATGGCCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPMALQA*KMAFTR
Trigger: CCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCAT...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAATGGCTCTGCAGGCATaGAAGATGGCCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGMALQA*KMAFTR
Trigger: CCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCAT...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCTTAACAATCATCTGCTaGCAGTCGTTGCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCLTIIC*QSLQER
Trigger: GCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAA...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTAAATCGAGAGAGAGGTaGAGGGGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPKSRER*RGGLSL
Trigger: CAGGCTCAGCCCACCCCTCCACCTCTCTCTCGATTT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGAAACTCAGGAAGGCTaGAGGCAGGGGCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTETQEG*RQGLGS
Trigger: GCTGCCAAGCCCCTGCCTCCAGCCTTCCTGAGTTTC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGACTCAGCCTCGCATCATaGCAAACCCAAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGLSLAS*QTQAHW
Trigger: CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAG...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGGTCCCCAGTCCCCATaGGTGGCTTCATTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPGPQSP*VASFLP
Trigger: TGGGAGAAATGAAGCCACCCATGGGGACTGGGGACC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGGAGGGATTAGGGGTTaGTCCCTGCCATCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPGGIRG*SLPSWF
Trigger: AAACCAGGATGGCAGGGACCAACCCCTAATCCCTCC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGTCACTCAGGAGGCCATaGGAGAAACAGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMSLRRP*EKQSPG
Trigger: TCCCGGAGACTGTTTCTCCCATGGCCTCCTGAGTGA...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCATTCCGTAAACTCCTCTaGCGAGATCCAGATCTGCCT +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPFRKLL*RDPDLP
Trigger: AGGCAGATCTGGATCTCGCCAGAGGAGTTTACGGAA...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCGTAAACTCCTCTaGCGAGATCCAGATCTGCCT +
Preference number: 4 (lower is better)
Translates to: MHGSAGMEDGLHQGALCHFRKLL*RDPDLP
Trigger: AGGCAGATCTGGATCTCGCCAGAGGAGTTTACGGAA...GTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCAAGGATAGGACCTCGTaGGGCCTTTCTGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSKDRTS*GLSVLE
Trigger: CTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTT...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAGGTGGGAGAAACCTTaGCTTGCAGAGTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPRWEKP*LAELEP
Trigger: AGGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCT...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATCTGTCTTGATGATCTaGGGCTGGACCAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTSVLMI*GWTRTG
Trigger: CCCGGTCCTGGTCCAGCCTCAGATCATCAAGACAGA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGACACAGAAGAATCCGTaGGCGGTCTACCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTETQKNP*AVYHAQ
Trigger: CTGGGCATGGTAGACCGCTCACGGATTCTTCTGTGT...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTACACAGAAGAATCCGTaGGCGGTCTACCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPTQKNP*AVYHAQ
Trigger: CTGGGCATGGTAGACCGCTCACGGATTCTTCTGTGT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACACTGGAAGACTTTCTTaGGCAGCCAGCGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYTGRLS*AASAPG
Trigger: GCCTGGTGCGCTGGCTGCTCAAGAAAGTCTTCCAGT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAGCTGGACCACGTGGTTaGGGGCAGGGTCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRAGPRG*GQGQRW
Trigger: CCACCTCTGACCCTGCCCTCAACCACGTGGTCCAGC...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGCCCAAGACGCAGACATaGATCTCCAAAGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWPKTQT*ISKEEC
Trigger: ACATTCCTCTTTGGAGATTCATGTCTGCGTCTTGGG...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGTGGGTGAATGACCGTTaGACTGAAGGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMWVNDR*TEGSTA
Trigger: AGCTGTGGACCCTTCAGTGCAACGGTCATTCACCCA...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCTGGATGATCCTCGTCTaGGGAGTGGTGCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSWMILV*GVVLNV
Trigger: AACATTCAGCACCACTCCGCAGACGAGGATCATCCA...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCATGGGCACTTTCTCTTaGCCCATCATTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPMGTFS*PIITGI
Trigger: AATGCCTGTAATGATGGGGCAAGAGAAAGTGCCCAT...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTATGGGCACTTTCTCTTaGCCCATCATTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSMGTFS*PIITGI
Trigger: AATGCCTGTAATGATGGGGCAAGAGAAAGTGCCCAT...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACTCTGCCTGTTTCCGGTaGCTCCAGAAGGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYSACFR*LQKVTE
Trigger: CTCGGTCACCTTCTGGAGGCACCGGAAACAGGCAGA...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGGCAGGTTTGTAGGTTaGCGGCAGCAGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMGRFVG*RQQLQN
Trigger: ATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCC...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGGAACAGGCGGATCCTaGAGGAAGCTTCCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPGTGGS*RKLPCD
Trigger: ATCACAGGGAAGCTTCCTGCAGGATCCGCCTGTTCC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGGATCTCAACCAGTGTaGTCGGTGGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMGSQPV*SVGSSP
Trigger: AGGAGAAGATCCCACCGAGCACACTGGTTGAGATCC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGAGGCATGCATGGCTCTaGAGGCATGGAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTERHAWL*RHGRWP
Trigger: AGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCT...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACATGCAGGAACACCTTaGGGTATGCTGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTHAGTP*GMLGGS
Trigger: GCTTCCGCCCAGCATACCGCAAGGTGTTCCTGCATG...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGCCAACATTATTTCATaGATCCGCAGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWANIIS*IRRPAP
Trigger: GGGGGCAGGCCTGCGGATGCATGAAATAATGTTGGC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCTTAGGGGTTGGTCCCTaGCATCCTGGTTTATTTATT +
Preference number: 4 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWILGVGP*HPGLFI
Trigger: AATAAATAAACCAGGATGGCAGGGACCAACCCCTAA...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGATAACATTCCAGCCTaGATCAAGGTGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPDNIPA*IKVALL
Trigger: CAGCAGGGCCACCTTGATGCAGGCTGGAATGTTATC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAATCACTAGTGCCGAATaGCCCCAAGACGCAGACATG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGITSAE*PQDADM
Trigger: CATGTCTGCGTCTTGGGGGCATTCGGCACTAGTGAT...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGTCAGCAGGCAGGGCTaGCCATCACTAGTGCCGAAT +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTVSRQG*PSLVPN
Trigger: ATTCGGCACTAGTGATGGGCAGCCCTGCCTGCTGAC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGGCTCCTTCATTCAATaGTGGAAGTCAGAGACACAG +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFGSFIQ*WKSETQ
Trigger: CTGTGTCTCTGACTTCCAGCATTGAATGAAGGAGCC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGGAAGGTAATGTGACCTaGGTGAATGACCGTTGCACT +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWEGNVT*VNDRCT
Trigger: AGTGCAACGGTCATTCACCCAGGTCACATTACCTTC...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGTGGTGCTGAATGTTaGCGTGATCATTACCGTCTG +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCSGAEC*RDHYRL
Trigger: CAGACGGTAATGATCACGCCAACATTCAGCACCACT...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAATATATCAAAGGCTGCTaGATGATCCTCGTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEYIKGC*MILVCG
Trigger: TCCGCAGACGAGGATCATCCAGCAGCCTTTGATATA...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGCATTGTGGTCAGAATaGTCCCACTGCTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPALWSE*SHCCPP
Trigger: TGGTGGGCAGCAGTGGGACCATTCTGACCACAATGC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCTCATTACAGGCATTGTaGTCAGAATGGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: AFPGSEACMALQAWKMAFSLQAL*SEWSHC
Trigger: GCAGTGGGACCATTCTGACCACAATGCCTGTAATGA...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCCACAGGAGGAGAGTCTaGCTCATCTTTGACCTTTGC +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGHRRRV*LIFDLC
Trigger: GCAAAGGTCAAAGATGAGCCAGACTCTCCTCCTGTG...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGTCCATGAAAAACTTCTaGCCCAGGGGGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWSMKNF*PRGWQS
Trigger: GCTCTGCCACCCCCTGGGCCAGAAGTTTTTCATGGA...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATCCATAGGTGGCCACTaGCCCTCTCGCAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTSIGGH*PSRNGR
Trigger: TCTGCCATTGCGAGAGGGCCAGTGGCCACCTATGGA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTTAACAATCATCTGCTaGCAGTCGTTGCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGLTIIC*QSLQER
Trigger: GCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGAACCACTGTTAAGTTaGGGACAGTCTGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPEPLLS*GQSVLW
Trigger: CCACAGTACAGACTGTCCCCAACTTAACAGTGGTTC...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGTGCCTCAACTTACCATaGGGTTACTTCCTGATAAAC +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLCLNLP*GYFLIN
Trigger: GTTTATCAGGAAGTAACCCCATGGTAAGTTGAGGCA...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTTGCCTCAACTTACCATaGGGTTACTTCCTGATAAAC +
Preference number: 4 (lower is better)
Translates to: AFTRGLSVTSRALGMRSTCLNLP*GYFLIN
Trigger: GTTTATCAGGAAGTAACCCCATGGTAAGTTGAGGCA...AGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGTCACTCAGGAGGCCATaGGAGAAACAGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTESLRRP*EKQSPG
Trigger: TCCCGGAGACTGTTTCTCCCATGGCCTCCTGAGTGA...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGAGAAAGAAAGCAGGTaGGGTCCAAGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWEKESR*GPSTPQ
Trigger: CTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGGGAACTCTCCCACTTaGTTACTGACAAATTGCAGC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHGNSPT*LLTNCS
Trigger: GCTGCAATTTGTCAGTAATCAAGTGGGAGAGTTCCC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGAAGCTTGTTCTTTTaGTTTGCCAGCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCRSLFF*FASFST
Trigger: GGTGCTGAAGCTGGCAAATCAAAAGAACAAGCTTCT...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGCCTTCTTCTTGGCCTaGGGTTTCACCAAGGACTCT +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEAFFLA*GFTKDS
Trigger: AGAGTCCTTGGTGAAACCTCAGGCCAAGAAGAAGGC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCTGGGACACAGTGACTaGTTGATTGAACATCAAGAA +
Preference number: 4 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSLGHSD*LIEHQE
Trigger: TTCTTGATGTTCAATCAATCAGTCACTGTGTCCCAG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTGGGACACAGTGACTaGTTGATTGAACATCAAGAA +
Preference number: 4 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHLGHSD*LIEHQE
Trigger: TTCTTGATGTTCAATCAATCAGTCACTGTGTCCCAG...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGCCAATCTGTGTTTATTaGATATGTCTGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLPICVY*ICLGHS
Trigger: ACTGTGTCCCAGACATATTCAATAAACACAGATTGG...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCTGCTGCCCCTGCCATTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFCCPCH*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCA...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAAGGACCGGGACCTGCTaGACCTGTGGCGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRRTGTC*TCGAAT
Trigger: AGTTGCTGCGCCACAGGTGCAGCAGGTCCCGGTCCT...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAAAGGCCTGGTGGACCTaGGCAATGGGGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRKAWWT*AMGSAG
Trigger: CCCAGCTGACCCCATTGCGCAGGTCCACCAGGCCTT...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACAGGCATGCATGGCTCTaGAGGCATGGAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYRHAWL*RHGRWP
Trigger: AGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTAGCTTAACAATCATCTaGTGGCAGTCGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSSLTII*WQSLQE
Trigger: CTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTGGCCAGGAAGCCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAAAATATATACAGATATaGCTCAACTTACCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LARKPSLPPHRVLSPMAAKYIQI*LNLPWG
Trigger: ACCCCATGGTAAGTTGAGGCATATCTGTATATATTT...TGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGTATATCAAAGGCTGCTaGATGATCCTCGTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQYIKGC*MILVCG
Trigger: TCCGCAGACGAGGATCATCCAGCAGCCTTTGATATA...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTATATCAAAGGCTGCTaGATGATCCTCGTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGYIKGC*MILVCG
Trigger: TCCGCAGACGAGGATCATCCAGCAGCCTTTGATATA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACTCATTACAGGCATTGTaGTCAGAATGGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHSLQAL*SEWSHC
Trigger: GCAGTGGGACCATTCTGACCACAATGCCTGTAATGA...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCACAGGAGGAGAGTCTaGCTCATCTTTGACCTTTGC +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMHRRRV*LIFDLC
Trigger: GCAAAGGTCAAAGATGAGCCAGACTCTCCTCCTGTG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCTGCAAAATCTCCTCTaGCGAGATCCAGATCTGCCT +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMLQNLL*RDPDLP
Trigger: AGGCAGATCTGGATCTCGCCAGAGGAGATTTTGCAG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361204.9
CDS-3UTR CCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAATGGCAGCAGTCAGATaGATCTCAACCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGMAAVR*ISTSVL
Trigger: GAGCACACTGGTTGAGATCCATCTGACTGCTGCCAT...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATCACTTCCAGGGCCTTaGGGATGCGTTCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTSLPGP*GCVPLW
Trigger: CCAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACGGAGTGAGGCATGCATaGCTCTGCAGGCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYGVRHA*LCRHGR
Trigger: TCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCC...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGGAGTGAGGCATGCATaGCTCTGCAGGCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTGVRHA*LCRHGR
Trigger: TCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTTAACAATCATCTGCTaGCAGTCGTTGCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPLTIIC*QSLQER
Trigger: GCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACCTCAGCCTCGCATCATaGCAAACCCAAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYLSLAS*QTQAHW
Trigger: CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAG...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACTGGTCCCTGCCATCCTaGTTTATTTATTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHWSLPS*FIYFQL
Trigger: GAGCTGAAAATAAATAAACCAGGATGGCAGGGACCA...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACGGAGGGATTAGGGGTTaGTCCCTGCCATCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYGGIRG*SLPSWF
Trigger: AAACCAGGATGGCAGGGACCAACCCCTAATCCCTCC...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAAGAGGGGCTTGCCGCTaGGGAGGGATTAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRRGACR*GGIRGW
Trigger: CCAACCCCTAATCCCTCCCCAGCGGCAAGCCCCTCT...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424354.5
3UTR CAA 72 bp CGGTTAAGGGTCTGCTTGATAGGAAATGCTACAGCCTaGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RLRVCLIGNATA*ALRIGPRGAFL
Trigger: CAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAGACCCTTAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGCTACACAGCTGTTCTaGAAACAAGTCAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPATQLF*KQVREL
Trigger: GAGTTCCCTGACTTGTTTTCAGAACAGCTGTGTAGC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACAGGTGGGAGAAACCTTaGCTTGCAGAGTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYRWEKP*LAELEP
Trigger: AGGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGTCCTGGCGCAGTTTATaGTTGACCTGCTGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMSWRSL*LTCCKY
Trigger: ATACTTGCAGCAGGTCAATCATAAACTGCGCCAGGA...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGCCTTCTTCTTGGCCTaGGGTTTCACCAAGGACTCT +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTAFFLA*GFTKDS
Trigger: AGAGTCCTTGGTGAAACCTCAGGCCAAGAAGAAGGC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGGAGTCCACAAAAGAATaGAGTAATTTCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLESTKE*SNFKYS
Trigger: GGAGTACTTGAAATTACTTCATTCTTTTGTGGACTC...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTGGTATATCAAAGGCTaGTGGATGATCCTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPWYIKG*WMILVC
Trigger: GCAGACGAGGATCATCCAGCAGCCTTTGATATACCA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCATTGTCCACCAGACTaGCTAGGTCGATGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWHCPPD*LGRCPL
Trigger: TAAAGGGCATCGACCTAGGCAGTCTGGTGGACAATG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGATCAGGAACAGCACTGTaGTCGGGGCCACACAGGCTC +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRSGTAL*SGPHRL
Trigger: GAGCCTGTGTGGCCCCGAGCACAGTGCTGTTCCTGA...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGAGCTTAACAATCATCTaGTGGCAGTCGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMSLTII*WQSLQE
Trigger: CTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGAGCTTAACAATCATCTaGTGGCAGTCGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKSLTII*WQSLQE
Trigger: CTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCGCCCAGTTTCTGCCCTaGCACCTATCCTCTCACGCC +
Preference number: 4 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFAQFLP*HLSSHA
Trigger: GGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGC...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCTTAACTCTTCCTCAATaGTGTGAGTTGCCCCAGATT +
Preference number: 4 (lower is better)
Translates to: AFPGSEACMALQAWKMAFLTLPQ*CELPQI
Trigger: AATCTGGGGCAACTCACAGCATTGAGGAAGAGTTAA...GAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGCTAGTAGCTGCATTCTaGTATATCAAAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQLVAAF*YIKGCW
Trigger: CCAGCAGCCTTTGATATACCAGAATGCAGCTACTAG...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAGCTGCCCACCAGGGTTaGTACTTGAAGGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRAAHQG*YLKGSR
Trigger: ACGGCTGCCCTTCAAGTACCAACCCTGGTGGGCAGC...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAGTTCCTCTTGAAATGTaGATGTTTAACTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVVPLEM*MFNSSS
Trigger: TGAGGAAGAGTTAAACATCCACATTTCAAGAGGAAC...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGCTACACAGCTGTTCTaGAAACAAGTCAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPATQLF*KQVREL
Trigger: GAGTTCCCTGACTTGTTTTCAGAACAGCTGTGTAGC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGATATCGTTTCTCAATaGTATTATGGGTTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGDIVSQ*YYGLSA
Trigger: GGCGGACAACCCATAATATCATTGAGAAACGATATC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCATCAGAAGGACATTCTaGTTAAAGTCCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: SLTIICWQSLQERRSPTFIRRTF*LKSSIF
Trigger: GAAGATCGAGGACTTTAATCAGAATGTCCTTCTGAT...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACATCAGAAGGACATTCTaGTTAAAGTCCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: MHGSAGMEDGLHQGALCHIRRTF*LKSSIF
Trigger: GAAGATCGAGGACTTTAATCAGAATGTCCTTCTGAT...GTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR TCA 90 bp GGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGAGTCCACAAAAGAATaGAGTAATTTCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: GSAGMEDGLHQGALCHFQESTKE*SNFKYS
Trigger: GGAGTACTTGAAATTACTTCATTCTTTTGTGGACTC...CTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR TCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGCCAATCTGTGTTTATTaGATATGTCTGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWPICVY*ICLGHS
Trigger: ACTGTGTCCCAGACATATTCAATAAACACAGATTGG...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATGGATGATCCTCGTCTaGGGAGTGGTGCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTWMILV*GVVLNV
Trigger: AACATTCAGCACCACTCCGCAGACGAGGATCATCCA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGTGGTATATCAAAGGCTaGTGGATGATCCTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWWYIKG*WMILVC
Trigger: GCAGACGAGGATCATCCAGCAGCCTTTGATATACCA...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACACTCCCCCAGGTACCTaGTTAATGGGCACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYTPPGT*LMGTFS
Trigger: AGAGAAAGTGCCCATTAAGCAGGTACCTGGGGGAGT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAGGCGAGATCCAGATCTaGCTGTTTCCGGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRGEIQI*LFPVPP
Trigger: TGGAGGCACCGGAAACAGGCAGATCTGGATCTCGCC...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGCGCCGGTTAAGGGTCTaGTTGATAGGAAATGCTACA +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTERRLRV*LIGNAT
Trigger: TGTAGCATTTCCTATCAAGCAGACCCTTAACCGGCG...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCTAGTAGCTGCATTCTaGTATATCAAAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMLVAAF*YIKGCW
Trigger: CCAGCAGCCTTTGATATACCAGAATGCAGCTACTAG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGCTAGTAGCTGCATTCTaGTATATCAAAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKLVAAF*YIKGCW
Trigger: CCAGCAGCCTTTGATATACCAGAATGCAGCTACTAG...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGTCATTACAGGCATTGTaGTCAGAATGGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWSLQAL*SEWSHC
Trigger: GCAGTGGGACCATTCTGACCACAATGCCTGTAATGA...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACATGGCAGCAGTCAGATaGATCTCAACCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYMAAVR*ISTSVL
Trigger: GAGCACACTGGTTGAGATCCATCTGACTGCTGCCAT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGAACCACTGTTAAGTTaGGGACAGTCTGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWEPLLS*GQSVLW
Trigger: CCACAGTACAGACTGTCCCCAACTTAACAGTGGTTC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACTGGTCCCTGCCATCCTaGTTTATTTATTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHWSLPS*FIYFQL
Trigger: GAGCTGAAAATAAATAAACCAGGATGGCAGGGACCA...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGGGAACTCTCCCACTTaGTTACTGACAAATTGCAGC +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTGNSPT*LLTNCS
Trigger: GCTGCAATTTGTCAGTAATCAAGTGGGAGAGTTCCC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACATCCTGGCGCAGTTTATaGTTGACCTGCTGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTSWRSL*LTCCKY
Trigger: ATACTTGCAGCAGGTCAATCATAAACTGCGCCAGGA...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTAGAAGCTTGTTCTTTTaGTTTGCCAGCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPRSLFF*FASFST
Trigger: GGTGCTGAAGCTGGCAAATCAAAAGAACAAGCTTCT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGTTGAAAGCTAGTAGCTaGATTCTGGTATATCAAAGG +
Preference number: 4 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWLKASS*ILVYQR
Trigger: CCTTTGATATACCAGAATGCAGCTACTAGCTTTCAA...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGATGGGCACTTTCTCTTaGCCCATCATTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEMGTFS*PIITGI
Trigger: AATGCCTGTAATGATGGGGCAAGAGAAAGTGCCCAT...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAAGAACGCCAGACTTGTaGATCTTGGCGTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRRTPDL*ILASVP
Trigger: GGGGACAGACGCCAAGATGCACAAGTCTGGCGTTCT...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGACTGCCTAGGTCGATaGCCTTTAGAAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTDCLGR*PLEACS
Trigger: AGAACAAGCTTCTAAAGGGCATCGACCTAGGCAGTC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAGGAACAGGCGGATCCTaGAGGAAGCTTCCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRGTGGS*RKLPCD
Trigger: ATCACAGGGAAGCTTCCTGCAGGATCCGCCTGTTCC...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGATTAACTCTTCCTCAATaGTGTGAGTTGCCCCAGATT +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGLTLPQ*CELPQI
Trigger: AATCTGGGGCAACTCACAGCATTGAGGAAGAGTTAA...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTCTGCTTGATAGGAAATaGTACAGCCTTGGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPLLDRK*YSLGSK
Trigger: CTTAGAGCCAAGGCTGTAGCATTTCCTATCAAGCAG...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CCA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCTTCTCAATGATATTATaGGTTGTCCGCCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ADPGRESRRYSNSASHHGFSMIL*VVRLSP
Trigger: AGGAGAAAGGCGGACAACCCATAATATCATTGAGAA...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACAGTATAGACTCTCCTTaGCAGCTGACTTCACAGACC +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYSIDSP*QLTSQT
Trigger: GGTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGGATATCGTTTCTCAATaGTATTATGGGTTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEDIVSQ*YYGLSA
Trigger: GGCGGACAACCCATAATATCATTGAGAAACGATATC...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTAGTCTGGCTCATCTTTaGCCTTTGCATCATCCAATA +
Preference number: 4 (lower is better)
Translates to: RERKQVGSKHTPGITFQPSLAHL*PLHHPI
Trigger: TATTGGATGATGCAAAGGTCAAAGATGAGCCAGACT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGAGTCCACAAAAGAATaGAGTAATTTCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHESTKE*SNFKYS
Trigger: GGAGTACTTGAAATTACTTCATTCTTTTGTGGACTC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGAAACATGGTTTAAGTTaGACCACTGTTAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TQTQGENQDATATQPRIMKHGLS*TTVKLG
Trigger: CCCCAACTTAACAGTGGTTCAACTTAAACCATGTTT...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGTTCTCAATGATATTATaGGTTGTCCGCCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMFSMIL*VVRLSP
Trigger: AGGAGAAAGGCGGACAACCCATAATATCATTGAGAA...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGTGCCTCAACTTACCATaGGGTTACTTCCTGATAAAC +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWCLNLP*GYFLIN
Trigger: GTTTATCAGGAAGTAACCCCATGGTAAGTTGAGGCA...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCGTTCCTCTTGAAATGTaGATGTTTAACTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ATALALRIGPRGAFLSWSVPLEM*MFNSSS
Trigger: TGAGGAAGAGTTAAACATCCACATTTCAAGAGGAAC...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR GCA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGATTGAAAGCTAGTAGCTaGATTCTGGTATATCAAAGG +
Preference number: 4 (lower is better)
Translates to: TLSGKMLRGRERNRERGGLKASS*ILVYQR
Trigger: CCTTTGATATACCAGAATGCAGCTACTAGCTTTCAA...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGTTCTCAATGATATTATaGGTTGTCCGCCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWFSMIL*VVRLSP
Trigger: AGGAGAAAGGCGGACAACCCATAATATCATTGAGAA...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCGGGAACTCTCCCACTTaGTTACTGACAAATTGCAGC +
Preference number: 4 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFGNSPT*LLTNCS
Trigger: GCTGCAATTTGTCAGTAATCAAGTGGGAGAGTTCCC...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR TCA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACATCAGAAGGACATTCTaGTTAAAGTCCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYIRRTF*LKSSIF
Trigger: GAAGATCGAGGACTTTAATCAGAATGTCCTTCTGAT...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAAAACATGGTTTAAGTTaGACCACTGTTAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTKHGLS*TTVKLG
Trigger: CCCCAACTTAACAGTGGTTCAACTTAAACCATGTTT...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR TCA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACCAATCTGTGTTTATTaGATATGTCTGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: ENQDATATQPRIMANPSTPICVY*ICLGHS
Trigger: ACTGTGTCCCAGACATATTCAATAAACACAGATTGG...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGTTGAAAGCTAGTAGCTaGATTCTGGTATATCAAAGG +
Preference number: 4 (lower is better)
Translates to: LPGAQRLLSPRESLIKTELKASS*ILVYQR
Trigger: CCTTTGATATACCAGAATGCAGCTACTAGCTTTCAA...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR GCA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAATATATACAGATATaGCTCAACTTACCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PGRESRRYSNSASHHGKPKYIQI*LNLPWG
Trigger: ACCCCATGGTAAGTTGAGGCATATCTGTATATATTT...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CCA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCTGGTCCCTGCCATCCTaGTTTATTTATTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFWSLPS*FIYFQL
Trigger: GAGCTGAAAATAAATAAACCAGGATGGCAGGGACCA...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS TCA 90 bp GTCCCGCTCAGGGAGACGCGGGGGCGGTGCCGTCGCCACCGCCCATaGCACCCGACAACCCCCGCCCGGCACCGCCTCACCGACGGGTGC +
Preference number: 5 (lower is better)
Translates to: VPLRETRGRCRRHRP*HPTTPARHRLTDGC
Trigger: GCACCCGTCGGTGAGGCGGTGCCGGGCGGGGGTTGTCGGGTGTCATGGGCGGTGGCGACGGCACCGCCCCCGCGTCTCCCTGAGCGGGAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS GCA 90 bp CGGCACCGCCTCACCGACGGGTGCCACCCGCCGCCATGTTTGCGTTaGGCCCGGGCGCCGCACAGAAAGGGCGGGGCGGGATTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: RHRLTDGCHPPPCLR*ARAPHRKGGAGFPR
Trigger: GCGGGGGAATCCCGCCCCGCCCTTTCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAGGCGGTGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS GCA 90 bp CCGCCCGGCACCGCCTCACCGACGGGTGCCACCCGCCGCCATGTTTaGGTTGCGCCCGGGCGCCGCACAGAAAGGGCGGGGCGGGATTCC +
Preference number: 5 (lower is better)
Translates to: PPGTASPTGATRRHV*VAPGRRTERAGRDS
Trigger: GGAATCCCGCCCCGCCCTTTCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAGGCGGTGCCGGGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CAA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCGCTGCCCAGGTCCCGTaGGAAGCCCGCCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RWPALAGRARHPPLRAWCAAQVP*EARQFS
Trigger: GCTGAACTGGCGGGCTTCCAACGGGACCTGGGCAGC...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCCAGGGGCTTGGCAGCTaGGGAGCTCCCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RWPALAGRARHPPLRAWCQGLGS*GAPPAA
Trigger: AGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCTG...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGCAGGGGCTTGGCAGCTaGGGAGCTCCCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWQGLGS*GAPPAA
Trigger: AGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCTG...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS CCA 90 bp GCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGGGCTaGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCC +
Preference number: 5 (lower is better)
Translates to: AAAGCVPAAGGCGWG*LLPSGARWLHAGTP
Trigger: GGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCCCCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435061.1
CDS-3UTR CAA 90 bp CGGTGGCCCGCTCTCGCTGGCCGGGCCAGGCATCCACCTCTCCGTGCTTGGTGCCGCTCCAGCAGGTTCTaGCAGAAGGCCTGGTGGACC +
Preference number: 5 (lower is better)
Translates to: RWPALAGRARHPPLRAWCRSSRF*QKAWWT
Trigger: GGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGCG...GCACCAAGCACGGAGAGGTGGATGCCTGGCCCGGCCAGCGAGAGCGGGCCACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp AAGCCCTGGACGCACCTCGTGGGGCTGGTAGACAAGTGCCCTGGGTaGAGCCCCAAGGCCCTGGAGGCTGCCTTGCGGTATGCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: KPWTHLVGLVDKCPG*SPKALEAALRYAGR
Trigger: CCGCCCAGCATACCGCAAGGCAGCCTCCAGGGCCTTGGGGCTTCACCCAGGGCACTTGTCTACCAGCCCCACGAGGTGCGTCCAGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435061.1
CDS GCA 90 bp GGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATTGCTGCTGCTGCTaGTGCTGCCACTGCTGCCGCTGCTGCTACCACTACCACCACTGC +
Preference number: 5 (lower is better)
Translates to: GPQLRCCCPCHCCCC*CCHCCRCCYHYHHC
Trigger: GCAGTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp TGGACCAGGACCGGGACCTGCTGCACCTGTGGCGCAGCAACTGTCTaGACCGTAGCCGGGGCAAGGGTCTGCAGCGTGCCATTGGCCGTT +
Preference number: 5 (lower is better)
Translates to: WTRTGTCCTCGAATV*TVAGARVCSVPLAV
Trigger: AACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGCTACGGTGCAGACAGTTGCTGCGCCACAGGTGCAGCAGGTCCCGGTCCTGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGTCATGCAGGAACACCTaGCGGTATGCTGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWSCRNT*RYAGRK
Trigger: CTTCCGCCCAGCATACCGCAAGGTGTTCCTGCATGA...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAATCTGCTGGCAGTCGTaGCAGGAGCGCCGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPICWQS*QERRSP
Trigger: GGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGAT...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTAGCTGGAGGCAGGGGCTaGGCAGCTTGGGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: AGSCHQAHGGFMQEHLAVAGGRG*AAWELP
Trigger: GGGGAGCTCCCAAGCTGCCAAGCCCCTGCCTCCAGC...TACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp GCATCTCGTCGATGTCTCCCAGGGTCAGCTCGTCGCCCAGCTCCGTaGGGGTCTCCATGGTCTCCAGACCACCCAGCTCGCCGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: ASRRCLPGSARRPAP*GSPWSPDHPARRCR
Trigger: ACGACAGCGGCGAGCTGGGTGGTCTGGAGACCATGGAGACCCTCACGGAGCTGGGCGACGAGCTGACCCTGGGAGACATCGACGAGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp CAGCTCCGCTGCTGCTGCCCCTGCCATTGCTGCTGCTGCTGCTGCTaGCACTGCTGCCGCTGCTGCTACCACTACCACCACTGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: QLRCCCPCHCCCCCC*HCCRCCYHYHHCQE
Trigger: TTCCTGGCAGTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp AAGGGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATTGCTGCTGCTaGTGCTGCTGCCACTGCTGCCGCTGCTGCTACCACTACCACCAC +
Preference number: 5 (lower is better)
Translates to: KGPQLRCCCPCHCCC*CCCHCCRCCYHYHH
Trigger: GTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp CTGAAGGGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATTGCTGCTaGTGCTGCTGCTGCCACTGCTGCCGCTGCTGCTACCACTACCAC +
Preference number: 5 (lower is better)
Translates to: LKGPQLRCCCPCHCC*CCCCHCCRCCYHYH
Trigger: GTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp GCACTGAAGGGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATTGCTaGTGCTGCTGCTGCTGCCACTGCTGCCGCTGCTGCTACCACTAC +
Preference number: 5 (lower is better)
Translates to: ALKGPQLRCCCPCHC*CCCCCHCCRCCYHY
Trigger: GTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTCAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp GTTGCACTGAAGGGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATTaGTGCTGCTGCTGCTGCTGCCACTGCTGCCGCTGCTGCTACCAC +
Preference number: 5 (lower is better)
Translates to: VALKGPQLRCCCPCH*CCCCCCHCCRCCYH
Trigger: GTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTCAGTGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp ATGACCGTTGCACTGAAGGGTCCACAGCTCCGCTGCTGCTGCCCCTaGCATTGCTGCTGCTGCTGCTGCTGCCACTGCTGCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MTVALKGPQLRCCCP*HCCCCCCCHCCRCC
Trigger: GCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTCAGTGCAACGGTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp ACCTGTGGCGCAGCAACTGTCTGCACCGTAGCCGGGGCAAGGGTCTaGAGCGTGCCATTGGCCGTTTGTGTCAGCACCCGCTGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: TCGAATVCTVAGARV*SVPLAVCVSTRWAC
Trigger: ACAGGCCCAGCGGGTGCTGACACAAACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGCTACGGTGCAGACAGTTGCTGCGCCACAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGGAGGTGGGAGAAACCTaGACTTGCAGAGTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWEVGET*TCRVGA
Trigger: GGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCTC...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCACCTCCACACCGGGTCTaGAGCCCCATGGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPPPHRV*SPMAAV
Trigger: GACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGG...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp CCTGACTCGAATGACAGGACACTGCGGCCAGAGCCTGAGTGTGGGTaGTGGTCAGAGTCGTGGGCCCCTCCCCACTGCAGCAGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: PDSNDRTLRPEPECG*WSESWAPPHCSREV
Trigger: GACTTCCCTGCTGCAGTGGGGAGGGGCCCACGACTCTGACCAGCACCCACACTCAGGCTCTGGCCGCAGTGTCCTGTCATTCGAGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 90 bp GCAGCCGTCTGGATAGGGGTGGTGAGGGCGGTGAGGGCCGGGTTCTaGACCGCAGCCATAACAGGGCTGCCATCTGTCTTCAGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: AAVWIGVVRAVRAGF*TAAITGLPSVFSVV
Trigger: GACCACACTGAAGACAGATGGCAGCCCTGTTATGGCTGCGGTCCAGAACCCGGCCCTCACCGCCCTCACCACCCCTATCCAGACGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 90 bp GACTCGAATGACAGGACACTGCGGCCAGAGCCTGAGTGTGGGTGCTaGTCAGAGTCGTGGGCCCCTCCCCACTGCAGCAGGGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: DSNDRTLRPEPECGC*SESWAPPHCSREVR
Trigger: CCTGACTTCCCTGCTGCAGTGGGGAGGGGCCCACGACTCTGACCAGCACCCACACTCAGGCTCTGGCCGCAGTGTCCTGTCATTCGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 90 bp CCGGGCGCTGGTCTTAGCTTCGTCTTCAAAGCCTGCCTCAGTGGCTaGCGTGGCCCGCCGGCACTGGAAGACTTTCTTGAGCAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: PGAGLSFVFKACLSG*RGPPALEDFLEQPA
Trigger: CGCTGGCTGCTCAAGAAAGTCTTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTTTGAAGACGAAGCTAAGACCAGCGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 90 bp AAGAAAGCCCTGGACGCACCTCGTGGGGCTGGTAGACAAGTGCCCTaGGTGAAGCCCCAAGGCCCTGGAGGCTGCCTTGCGGTATGCTGG +
Preference number: 5 (lower is better)
Translates to: KKALDAPRGAGRQVP*VKPQGPGGCLAVCW
Trigger: CCAGCATACCGCAAGGCAGCCTCCAGGGCCTTGGGGCTTCACCCAGGGCACTTGTCTACCAGCCCCACGAGGTGCGTCCAGGGCTTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435061.1
CDS-3UTR CAA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCCACCCGCCGCCATGTTaGCGTTGCGCCCGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: PGRESRRYSNSASHHGKPHPPPC*RCARAP
Trigger: CGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTG...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS-3UTR CAA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCTCCACCTCTCCGTGCTaGGTGCTCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWISTSPC*VLCVVR
Trigger: GCGCACCACGCAGAGCACCAAGCACGGAGAGGTGGA...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTATCTGCTGGCAGTCGTaGCAGGAGCGCCGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSICWQS*QERRSP
Trigger: GGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGAT...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTATCTGCTGGCAGTCGTaGCAGGAGCGCCGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: AGMEDGLHQGALCHFQGLICWQS*QERRSP
Trigger: GGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGAT...AAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS GCA 90 bp TGCTGCTGCCCCTGCCATTGCTGCTGCTGCTGCTGCTGCCACTGCTaGCGCTGCTGCTACCACTACCACCACTGCCAGGAAAGGAGCTAC +
Preference number: 5 (lower is better)
Translates to: CCCPCHCCCCCCCHC*RCCYHYHHCQERSY
Trigger: GTAGCTCCTTTCCTGGCAGTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp CAGAGCCGCATCCCGGGCGCTGGTCTTAGCTTCGTCTTCAAAGCCTaGCTCAGTGGCTGGCGTGGCCCGCCGGCACTGGAAGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: QSRIPGAGLSFVFKA*LSGWRGPPALEDFL
Trigger: AAGAAAGTCTTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTTTGAAGACGAAGCTAAGACCAGCGCCCGGGATGCGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 90 bp TCGTCTTCAAAGCCTGCCTCAGTGGCTGGCGTGGCCCGCCGGCACTaGAAGACTTTCTTGAGCAGCCAGCGCACCAGGCGTAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSSKPASVAGVARRH*KTFLSSQRTRRSFC
Trigger: GCAGAAGCTACGCCTGGTGCGCTGGCTGCTCAAGAAAGTCTTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTTTGAAGACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGCCGCCATGTTTGCGTaGCGCCCGGGCGCCGCACAG +
Preference number: 5 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMAAMFA*RPGAAQ
Trigger: CTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS-3UTR CAA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCACCCGCCGCCATGTTaGCGTTGCGCCCGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWHPPPC*RCARAP
Trigger: CGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS-3UTR CAA 90 bp GGGCATCTAGTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGTGCTGCCCACCAGGGTaGGTACTTGAAGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: GHLVTAALRGSAQGCTGLCCPPG*VLEGQP
Trigger: CGGCTGCCCTTCAAGTACCAACCCTGGTGGGCAGCA...CAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCACTAGATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TCTGCGTGGTGCGCCGCCGCAGGCTGTGTTCCAGCAGCTGGTGGGTGCGGGTGGCCATCATTACAGGCATaGTGGTCAGAATGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: SAWCAAAGCVPAAGGCGWPSLQA*WSEWSH
Trigger: GTGGGACCATTCTGACCACAATGCCTGTAATGATGG...CCACCCGCACCCACCAGCTGCTGGAACACAGCCTGCGGCGGCGCACCACGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGCCAGGAAGCCCAGCTaGCCTCCACACCGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPARKPS*PPHRVL
Trigger: CAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCAGGAAGCCCAGCTaGCCTCCACACCGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSARKPS*PPHRVL
Trigger: CAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGCTGCCCAGGTCCCGTaGGAAGCCCGCCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLTIICWQSLQERRSPTFAAQVP*EARQFS
Trigger: GCTGAACTGGCGGGCTTCCAACGGGACCTGGGCAGC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTTCCACCTCTCCGTGCTaGGTGCTCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSSTSPC*VLCVVR
Trigger: GCGCACCACGCAGAGCACCAAGCACGGAGAGGTGGA...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp TGCCCCTGCCATTGCTGCTGCTGCTGCTGCTGCCACTGCTGCCGCTaGTGCTACCACTACCACCACTGCCAGGAAAGGAGCTACACAGCT +
Preference number: 5 (lower is better)
Translates to: CPCHCCCCCCCHCCR*CYHYHHCQERSYTA
Trigger: AGCTGTGTAGCTCCTTTCCTGGCAGTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 90 bp GCCTGTGGGGAGGCCGCCGAGGGAGAGAAGGAAGGTAATGTGACCTaGGTGAATGACCGTTGCACTGAAGGGTCCACAGCTCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ACGEAAEGEKEGNVT*VNDRCTEGSTAPLL
Trigger: CAGCAGCGGAGCTGTGGACCCTTCAGTGCAACGGTCATTCACCCAGGTCACATTACCTTCCTTCTCTCCCTCGGCGGCCTCCCCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGCCGCCATGTTTGCGTaGCGCCCGGGCGCCGCACAG +
Preference number: 5 (lower is better)
Translates to: RERKQVGSKHTPGITFQPAAMFA*RPGAAQ
Trigger: CTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS-3UTR CAA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGGGGGCTCAAGCTGCTaGACTCCCCCAGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEGGSSC*TPPGTC
Trigger: GCAGGTACCTGGGGGAGTCAAGCAGCTTGAGCCCCC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCCTCCACACCGGGTCTaGAGCCCCATGGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCPPHRV*SPMAAV
Trigger: GACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCCGCTCCAGCAGGTTCTaGCAGAAGGCCTGGTGGACC +
Preference number: 5 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPRSSRF*QKAWWT
Trigger: GGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGCG...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCTGCCCAGGTCCCGTaGGAAGCCCGCCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHAAQVP*EARQFS
Trigger: GCTGAACTGGCGGGCTTCCAACGGGACCTGGGCAGC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCTCCACCTCTCCGTGCTaGGTGCTCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: SLTIICWQSLQERRSPTFSTSPC*VLCVVR
Trigger: GCGCACCACGCAGAGCACCAAGCACGGAGAGGTGGA...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp TGTGGCGCCATGAAGGCTGCAGGGAGGAGGACCCGGACACAGTGCTaGCAGCTGCTGGGACAACTGTCGTGTTGTGCAGAGCAGGACACT +
Preference number: 5 (lower is better)
Translates to: CGAMKAAGRRTRTQC*QLLGQLSCCAEQDT
Trigger: AGTGTCCTGCTCTGCACAACACGACAGTTGTCCCAGCAGCTGTCAGCACTGTGTCCGGGTCCTCCTCCCTGCAGCCTTCATGGCGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS TCA 90 bp CTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTGCAGCAGTaGCAGGGAGTCGAGAGGCAGGTCACTATGTGTCACCTGCGTGAC +
Preference number: 5 (lower is better)
Translates to: LQAWKMAFTRGLLQQ*QGVERQVTMCHLRD
Trigger: GTCACGCAGGTGACACATAGTGACCTGCCTCTCGACTCCCTGTCACTGCTGCAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS GCA 90 bp CCCTGCCATTGCTGCTGCTGCTGCTGCTGCCACTGCTGCCGCTGCTaGTACCACTACCACCACTGCCAGGAAAGGAGCTACACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: PCHCCCCCCCHCCRC*YHYHHCQERSYTAV
Trigger: AACAGCTGTGTAGCTCCTTTCCTGGCAGTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp GTTGCCCTGGGTGTGGTGGGAACTGAGGTGGGAGAAACCTTGACTTaGAGAGTTGGAGCCTGTGGGGAGGCCGCCGAGGGAGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: VALGVVGTEVGETLT*RVGACGEAAEGEKE
Trigger: TTCCTTCTCTCCCTCGGCGGCCTCCCCACAGGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCTCAGTTCCCACCACACCCAGGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp GCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTaGAGCAGTGACAGGGAGTCGAGAGGCAGGTCACTATGTGTCACC +
Preference number: 5 (lower is better)
Translates to: AWLCRHGRWPSPGGS*SSDRESRGRSLCVT
Trigger: GGTGACACATAGTGACCTGCCTCTCGACTCCCTGTCACTGCTGCAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS GCA 90 bp TCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTaGAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SAAHLLSQGVRHAWL*RHGRWPSPGGSCSS
Trigger: ACTGCTGCAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS CCA 90 bp AAGATGCTGGGGGCCACACTGCTCTCGTCTCTTCTTTTCAGCCTGTaGCGCCATGAAGGCTGCAGGGAGGAGGACCCGGACACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: KMLGATLLSSLLFSL*RHEGCREEDPDTVL
Trigger: CAGCACTGTGTCCGGGTCCTCCTCCCTGCAGCCTTCATGGCGCCACAGGCTGAAAAGAAGAGACGAGAGCAGTGTGGCCCCCAGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS CCA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATaGCTCTGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RNSAAHLLSQGVRHA*LCRHGRWPSPGGSC
Trigger: GCAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS-3UTR CAA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAGGGAGAAACCTTGACTaGCAGAGTTGGAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPGRNLD*QSWSLW
Trigger: CCACAGGCTCCAACTCTGCAAGTCAAGGTTTCTCCC...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGCACCAGGCTTTGGACTaGAGGCTGAAGGACTTGAAA +
Preference number: 5 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWHQALD*RLKDLK
Trigger: TTTCAAGTCCTTCAGCCTCAAGTCCAAAGCCTGGTG...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACCGTGCCATTGGCCGTTaGTGTCAGCACCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHRAIGR*CQHPLG
Trigger: GCCCAGCGGGTGCTGACACAAACGGCCAATGGCACG...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGTCTGCAGCGTGCCATaGGCCGTTTGTGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSVCSVP*AVCVST
Trigger: GGTGCTGACACAAACGGCCAATGGCACGCTGCAGAC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCATGCTGCCCACCAGGGTaGGTACTTGAAGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPCCPPG*VLEGQP
Trigger: CGGCTGCCCTTCAAGTACCAACCCTGGTGGGCAGCA...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGGGGGGCTCAAGCTGCTaGACTCCCCCAGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQGGSSC*TPPGTC
Trigger: GCAGGTACCTGGGGGAGTCAAGCAGCTTGAGCCCCC...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGGGGGCTCAAGCTGCTaGACTCCCCCAGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: ADPGRESRRYSNSASHHGGGSSC*TPPGTC
Trigger: GCAGGTACCTGGGGGAGTCAAGCAGCTTGAGCCCCC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GGCTGGCTCCTGCCATCAGGCGCACGGTGGCTTCATGCAGGAACACCTTGCGGTCTCAGAACGCCAGACTaGTGCATCTTGGCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: GWLLPSGARWLHAGTPCGLRTPD*CILASV
Trigger: GACAGACGCCAAGATGCACAAGTCTGGCGTTCTGAG...ACCGCAAGGTGTTCCTGCATGAAGCCACCGTGCGCCTGATGGCAGGAGCCAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAGGACCCAGGGCGGACTaGAGCACGGAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TLSGKMLRGRERNRERGGGPRAD*STELLE
Trigger: CTCCAGGAGCTCCGTGCTCAAGTCCGCCCTGGGTCC...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCAGTGGCCCCACTGACGTaGAGGCTGCTCCATAGGTGG +
Preference number: 5 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPVAPLT*RLLHRW
Trigger: CCACCTATGGAGCAGCCTCAACGTCAGTGGGGCCAC...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCAGCTGGACCACGTGGTaGAGGGCAGGGTCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SLTIICWQSLQERRSPTFSWTTW*RAGSEV
Trigger: CACCTCTGACCCTGCCCTCAACCACGTGGTCCAGCT...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp GTTTGTGTCAGCACCCGCTGGGCCTGTACTGTCTGCACCTGCTGCTaGATGGTGACCGGCTGTACCTGGGAGGATGTCACCAGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: VCVSTRWACTVCTCC*MVTGCTWEDVTRLW
Trigger: CCAAAGCCTGGTGACATCCTCCCAGGTACAGCCGGTCACCATTCAGCAGCAGGTGCAGACAGTACAGGCCCAGCGGGTGCTGACACAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp GCCGAGGGAGAGAAGGAAGGTAATGTGACCTGGGTGAATGACCGTTaGACTGAAGGGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: AEGEKEGNVTWVNDR*TEGSTAPLLLPLPL
Trigger: CAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTCAGTGCAACGGTCATTCACCCAGGTCACATTACCTTCCTTCTCTCCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp GCTGCAAAATCTCCTCTGGCGAGATCCAGATCTGCCTGTTTCCGGTaGCTCCAGAAGGTGACCGAGGAGCGCGAGTGTGGCCGGATCACT +
Preference number: 5 (lower is better)
Translates to: AAKSPLARSRSACFR*LQKVTEERECGRIT
Trigger: AGTGATCCGGCCACACTCGCGCTCCTCGGTCACCTTCTGGAGGCACCGGAAACAGGCAGATCTGGATCTCGCCAGAGGAGATTTTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361204.9
CDS GCA 90 bp AGGTGGGCAGTGCCCGGCCCAAAACTGCCAGGCAGGTTTGTAGGTTaGCGGCAGCAGCTGCAAAATCTCCTCTGGCGAGATCCAGATCTG +
Preference number: 5 (lower is better)
Translates to: RWAVPGPKLPGRFVG*RQQLQNLLWRDPDL
Trigger: CAGATCTGGATCTCGCCAGAGGAGATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCCTGGCAGTTTTGGGCCGGGCACTGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361204.9
CDS GCA 90 bp AGGTGGGCAGTGCCCGGCCCAAAACTGCCAGGCAGGTTTGTAGGTTaGCGGCAGCAGCTGCAAAATCTCCTGCTGCTGAGGAGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: RWAVPGPKLPGRFVG*RQQLQNLLLLRSVL
Trigger: CAGAACACTCCTCAGCAGCAGGAGATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCCTGGCAGTTTTGGGCCGGGCACTGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp ACACTGCTCTCGTCTCTTCTTTTCAGCCTGTGGCGCCATGAAGGCTaGAGGGAGGAGGACCCGGACACAGTGCTGACAGCTGCTGGGACA +
Preference number: 5 (lower is better)
Translates to: TLLSSLLFSLWRHEG*REEDPDTVLTAAGT
Trigger: TGTCCCAGCAGCTGTCAGCACTGTGTCCGGGTCCTCCTCCCTGCAGCCTTCATGGCGCCACAGGCTGAAAAGAAGAGACGAGAGCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS-3UTR CAA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGCGTGCCATTGGCCGTTaGTGTCAGCACCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMRAIGR*CQHPLG
Trigger: GCCCAGCGGGTGCTGACACAAACGGCCAATGGCACG...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCGTCTGCAGCGTGCCATaGGCCGTTTGTGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCVCSVP*AVCVST
Trigger: GGTGCTGACACAAACGGCCAATGGCACGCTGCAGAC...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCCACCAGGGTTGGTACTaGAAGGGCAGCCGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPHQGWY*KGSRLD
Trigger: ATCCAGACGGCTGCCCTTCAAGTACCAACCCTGGTG...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACCCAGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCCAGACTTGTGCATCTaGGCGTCTGTCCCCATGACC +
Preference number: 5 (lower is better)
Translates to: TQLNNHLLAVVAGAPVAHPDLCI*ASVPMT
Trigger: GGTCATGGGGACAGACGCCAAGATGCACAAGTCTGG...GTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGAGCTGGACCACGTGGTaGAGGGCAGGGTCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQSWTTW*RAGSEV
Trigger: CACCTCTGACCCTGCCCTCAACCACGTGGTCCAGCT...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGCAGGGGCTTGGCAGCTaGGGAGCTCCCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPGAQRLLSPRESLIKTEQGLGS*GAPPAA
Trigger: AGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCTG...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGCTGGAGGCAGGGGCTaGGCAGCTTGGGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: ENQDATATQPRIMANPSTAGGRG*AAWELP
Trigger: GGGGAGCTCCCAAGCTGCCAAGCCCCTGCCTCCAGC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACGCTGGAGGCAGGGGCTaGGCAGCTTGGGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYAGGRG*AAWELP
Trigger: GGGGAGCTCCCAAGCTGCCAAGCCCCTGCCTCCAGC...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp TTGTGCAGAGCAGGACACTTGCACAGAGGACCTGCTGGCCCAACTTaGGTTCTCCATGGTGCCCTCACCCCCGACTTTTCTAGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: LCRAGHLHRGPAGPT*VLHGALTPDFSSRP
Trigger: TGGGCGGCTAGAAAAGTCGGGGGTGAGGGCACCATGGAGAACTCAAGTTGGGCCAGCAGGTCCTCTGTGCAAGTGTCCTGCTCTGCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS-3UTR CAA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGGGAGAAACCTTGACTaGCAGAGTTGGAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSGRNLD*QSWSLW
Trigger: CCACAGGCTCCAACTCTGCAAGTCAAGGTTTCTCCC...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGGATGTCACCAGGCTTaGGACTTGAGGCTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPGCHQA*DLRLKD
Trigger: GTCCTTCAGCCTCAAGTCCAAAGCCTGGTGACATCC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGCGTGCCATTGGCCGTTaGTGTCAGCACCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LPGAQRLLSPRESLIKTERAIGR*CQHPLG
Trigger: GCCCAGCGGGTGCTGACACAAACGGCCAATGGCACG...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGCACCAGGGTTGGTACTaGAAGGGCAGCCGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWHQGWY*KGSRLD
Trigger: ATCCAGACGGCTGCCCTTCAAGTACCAACCCTGGTG...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGTGCTGCCCACCAGGGTaGGTACTTGAAGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKCCPPG*VLEGQP
Trigger: CGGCTGCCCTTCAAGTACCAACCCTGGTGGGCAGCA...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CAA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAACCAGACTTGTGCATCTaGGCGTCTGTCCCCATGACC +
Preference number: 5 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEPDLCI*ASVPMT
Trigger: GGTCATGGGGACAGACGCCAAGATGCACAAGTCTGG...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CCAGTTCAGCGCCTGACGCGTGGTAGGTCTCCCCCACAGCCTGGCTGGCACTGGGCTTGTTCTTTTGATTaGCCAGCTTCAGCACCATGT +
Preference number: 5 (lower is better)
Translates to: PVQRLTRGRSPPQPGWHWACSFD*PASAPC
Trigger: ACATGGTGCTGAAGCTGGCAAATCAAAAGAACAAGC...CCAGTGCCAGCCAGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTGCCAGGAAGCCCAGCTaGCCTCCACACCGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RERKQVGSKHTPGITFQPARKPS*PPHRVL
Trigger: CAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGC...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGTCACTTCCAGGGCCTaGGGGATGCGTTCCACTTTG +
Preference number: 5 (lower is better)
Translates to: SLTIICWQSLQERRSPTFVTSRA*GMRSTL
Trigger: CAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGAC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGTGGCCCCACTGACGTaGAGGCTGCTCCATAGGTGG +
Preference number: 5 (lower is better)
Translates to: PGRESRRYSNSASHHGKPVAPLT*RLLHRW
Trigger: CCACCTATGGAGCAGCCTCAACGTCAGTGGGGCCAC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp GACTCCAATGCTGCCACTATGGCACCATGCCACCAGCTCCAGATCTaGAATGCCAGCCCTGAGCTAGGGTTAGCGCCCCACCCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: DSNAATMAPCHQLQI*NASPELGLAPHPLA
Trigger: TGCTAAAGGGTGGGGCGCTAACCCTAGCTCAGGGCTGGCATTTCAGATCTGGAGCTGGTGGCATGGTGCCATAGTGGCAGCATTGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS-3UTR CAA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGGGAGAAACCTTGACTaGCAGAGTTGGAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SLTIICWQSLQERRSPTFGRNLD*QSWSLW
Trigger: CCACAGGCTCCAACTCTGCAAGTCAAGGTTTCTCCC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGTCTGCAGCGTGCCATaGGCCGTTTGTGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMVCSVP*AVCVST
Trigger: GGTGCTGACACAAACGGCCAATGGCACGCTGCAGAC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACCTCCACACCGGGTCTaGAGCCCCATGGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: ENQDATATQPRIMANPSTPPHRV*SPMAAV
Trigger: GACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGG...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGCGCTCCAGCAGGTTCTaGCAGAAGGCCTGGTGGACC +
Preference number: 5 (lower is better)
Translates to: LPGAQRLLSPRESLIKTERSSRF*QKAWWT
Trigger: GGTCCACCAGGCCTTCTGCAAGAACCTGCTGGAGCG...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGGTGGCCCCACTGACGTaGAGGCTGCTCCATAGGTGG +
Preference number: 5 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWVAPLT*RLLHRW
Trigger: CCACCTATGGAGCAGCCTCAACGTCAGTGGGGCCAC...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGAGCTGGACCACGTGGTaGAGGGCAGGGTCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: LPGAQRLLSPRESLIKTESWTTW*RAGSEV
Trigger: CACCTCTGACCCTGCCCTCAACCACGTGGTCCAGCT...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp AAGGTGACCGAGGAGCGCGAGTGTGGCCGGATCACTGGCTCCCCATaGACCAGCAGCTTCACAAAGACGCTCAGGACAATCACACCATTT +
Preference number: 5 (lower is better)
Translates to: KVTEERECGRITGSP*TSSFTKTLRTITPF
Trigger: AAATGGTGTGATTGTCCTGAGCGTCTTTGTGAAGCTGCTGGTTCATGGGGAGCCAGTGATCCGGCCACACTCGCGCTCCTCGGTCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 90 bp TGGGCACTTTCTCTTGCCCCATCATTACAGGCATTGTGGTCAGAATaGTCCCACTGCTGCCCACCAGGGTTGGTACTTGAAGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: WALSLAPSLQALWSE*SHCCPPGLVLEGQP
Trigger: CGGCTGCCCTTCAAGTACCAACCCTGGTGGGCAGCAGTGGGACCATTCTGACCACAATGCCTGTAATGATGGGGCAAGAGAAAGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGAGGTGGGAGAAACCTaGACTTGCAGAGTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHEVGET*TCRVGA
Trigger: GGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCTC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCCTTCACCAGGGGGCTCTCTGTCACTTCCAGGGCCTTGGGGATGCGTTCCACTCATTACCGTCTGTTGTaGCAGCTGAGTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: AFTRGLSVTSRALGMRSTHYRLL*QLSLRL
Trigger: CAACCTCAAACTCAGCTGCAACAACAGACGGTAATG...AGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGAGAGCCCCCTGGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS-3UTR CAA 90 bp ACCCGCATCGAGGCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTCACCAGGCTTTGGACTaGAGGCTGAAGGACTTGAAA +
Preference number: 5 (lower is better)
Translates to: TRIEAGDLIPSAHHRQPSHQALD*RLKDLK
Trigger: TTTCAAGTCCTTCAGCCTCAAGTCCAAAGCCTGGTG...AGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGCCTCGATGCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGGGATGTCACCAGGCTTaGGACTTGAGGCTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQGCHQA*DLRLKD
Trigger: GTCCTTCAGCCTCAAGTCCAAAGCCTGGTGACATCC...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCCAGTATAGACTCTCCTaGGCAGCTGACTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPQYRLS*AADFTD
Trigger: GTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACTG...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACGCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGTCACTTCCAGGGCCTaGGGGATGCGTTCCACTTTG +
Preference number: 5 (lower is better)
Translates to: TQTQGENQDATATQPRIMVTSRA*GMRSTL
Trigger: CAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGAC...CATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGGTCACTTCCAGGGCCTaGGGGATGCGTTCCACTTTG +
Preference number: 5 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMVTSRA*GMRSTL
Trigger: CAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGAC...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCTCATGCAGGAACACCTaGCGGTATGCTGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PGRESRRYSNSASHHGKPSCRNT*RYAGRK
Trigger: CTTCCGCCCAGCATACCGCAAGGTGTTCCTGCATGA...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CAGGTGACAGCTAAGAAGACAAGGCTCTTCCCCACCACTCTCAGCGGGAAGATGTCATGCAGGAACACCTaGCGGTATGCTGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QVTAKKTRLFPTTLSGKMSCRNT*RYAGRK
Trigger: CTTCCGCCCAGCATACCGCAAGGTGTTCCTGCATGA...CATCTTCCCGCTGAGAGTGGTGGGGAAGAGCCTTGTCTTCTTAGCTGTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp GCACTGATTGTGAACCACCAGTGCCTGCCTCCACCACAAAGCTTCTaGAGATGCTGGGGGCCACACTGCTCTCGTCTCTTCTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ALIVNHQCLPPPQSF*RCWGPHCSRLFFSA
Trigger: GGCTGAAAAGAAGAGACGAGAGCAGTGTGGCCCCCAGCATCTTCAGAAGCTTTGTGGTGGAGGCAGGCACTGGTGGTTCACAATCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS TCA 90 bp CACTATGGCACCATGCCACCAGCTCCAGATCTGAAATGCCAGCCCTaGGCTAGGGTTAGCGCCCCACCCTTTAGCACCTTCATTCAATGC +
Preference number: 5 (lower is better)
Translates to: HYGTMPPAPDLKCQP*ARVSAPPFSTFIQC
Trigger: GCATTGAATGAAGGTGCTAAAGGGTGGGGCGCTAACCCTAGCTCAGGGCTGGCATTTCAGATCTGGAGCTGGTGGCATGGTGCCATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS CCA 90 bp CTCCTGCTAACTCAAACAAGATTCCCCTGGAGAGAAGCAAGTGAGTaGCCAAGGAGGGTTACGCACTCTGTCACTTCCAGGGCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LLLTQTRFPWREASE*PRRVTHSVTSRALG
Trigger: CCCCAAGGCCCTGGAAGTGACAGAGTGCGTAACCCTCCTTGGCCACTCACTTGCTTCTCTCCAGGGGAATCTTGTTTGAGTTAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS-3UTR CAA 90 bp CCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCGAGGTGGGAGAAACCTaGACTTGCAGAGTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PGRESRRYSNSASHHGKPEVGET*TCRVGA
Trigger: GGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCTC...GGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCACCAGGGTTGGTACTaGAAGGGCAGCCGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWHQGWY*KGSRLD
Trigger: ATCCAGACGGCTGCCCTTCAAGTACCAACCCTGGTG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTCCAGACTTGTGCATCTaGGCGTCTGTCCCCATGACC +
Preference number: 5 (lower is better)
Translates to: RERKQVGSKHTPGITFQPPDLCI*ASVPMT
Trigger: GGTCATGGGGACAGACGCCAAGATGCACAAGTCTGG...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCCAGTATAGACTCTCCTaGGCAGCTGACTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCQYRLS*AADFTD
Trigger: GTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACTG...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CCCAGCTTGCCTCCACACCGGGTCTTGAGCCCCATGGCAGCAGTCAGATGGATCGGAGTGTTCTGGTTCTaGTTCCTCTTGAAATGTGGA +
Preference number: 5 (lower is better)
Translates to: PSLPPHRVLSPMAAVRWIGVFWF*FLLKCG
Trigger: TCCACATTTCAAGAGGAACAAGAACCAGAACACTCC...GATCCATCTGACTGCTGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGCTTAACAATCATCTGCTGGCAGTCGTTGCAGGAGCGCCGGTCGCCCACCTTCGGAAATGCTACAGCCTaGGCTCTAAGGATAGGACCT +
Preference number: 5 (lower is better)
Translates to: SLTIICWQSLQERRSPTFGNATA*ALRIGP
Trigger: AGGTCCTATCCTTAGAGCCAAGGCTGTAGCATTTCC...GAAGGTGGGCGACCGGCGCTCCTGCAACGACTGCCAGCAGATGATTGTTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CAA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCGATCATTACCGTCTGTaGTTGCAGCTGAGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCDHYRL*LQLSLR
Trigger: CCTCAAACTCAGCTGCAACAACAGACGGTAATGATC...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCTTGAGGCTGAAGGACTaGAAAGCTAGTAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPLRLKD*KASSCI
Trigger: AATGCAGCTACTAGCTTTCAAGTCCTTCAGCCTCAA...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTCTCAGAACGCCAGACTaGTGCATCTTGGCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: RERKQVGSKHTPGITFQPLRTPD*CILASV
Trigger: GACAGACGCCAAGATGCACAAGTCTGGCGTTCTGAG...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCTCAGAACGCCAGACTaGTGCATCTTGGCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWLRTPD*CILASV
Trigger: GACAGACGCCAAGATGCACAAGTCTGGCGTTCTGAG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTACAGCCTTGGCTCTAAGGATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCCAGTATAGACTCTCCTaGGCAGCTGACTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: ATALALRIGPRGAFLSWSQYRLS*AADFTD
Trigger: GTCTGTGAAGTCAGCTGCCAAGGAGAGTCTATACTG...GCTCCAAGACAGAAAGGCCCCACGAGGTCCTATCCTTAGAGCCAAGGCTGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CAA 90 bp GTGACAGCAGCTTTAAGGGGCTCTGCCCAGGGGTGCACTGGCCTGAGTGGCCCAACCAATCTGTGTTTATaGAATATGTCTGGGACACAG +
Preference number: 5 (lower is better)
Translates to: VTAALRGSAQGCTGLSGPTNLCL*NMSGTQ
Trigger: CTGTGTCCCAGACATATTCAATAAACACAGATTGGT...TGGGCCACTCAGGCCAGTGCACCCCTGGGCAGAGCCCCTTAAAGCTGCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCGGAGTGTTCTGGTTCTaGTTCCTCTTGAAATGTGGA +
Preference number: 5 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPGVFWF*FLLKCG
Trigger: TCCACATTTCAAGAGGAACAAGAACCAGAACACTCC...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCCCTTGATTACTGACAAATaGCAGCATCTCGTCGATGTC +
Preference number: 5 (lower is better)
Translates to: AIKSGLPSFCPATYPLTPLITDK*QHLVDV
Trigger: GACATCGACGAGATGCTGCAATTTGTCAGTAATCAA...GGGCGTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGATCATTACCGTCTGTaGTTGCAGCTGAGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHDHYRL*LQLSLR
Trigger: CCTCAAACTCAGCTGCAACAACAGACGGTAATGATC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGGAACTCTGCTGCCCATCTGCTTTCCCAGGGAGTGAGGCATGCATGGCTCTGCTTGAGGCTGAAGGACTaGAAAGCTAGTAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: RNSAAHLLSQGVRHAWLCLRLKD*KASSCI
Trigger: AATGCAGCTACTAGCTTTCAAGTCCTTCAGCCTCAA...GCAGAGCCATGCATGCCTCACTCCCTGGGAAAGCAGATGGGCAGCAGAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTTCATTCAATGCTGGAAGCCATCATTACAGGCATaGTGGTCAGAATGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: CRHGRWPSPGGSFIQCWKPSLQA*WSEWSH
Trigger: GTGGGACCATTCTGACCACAATGCCTGTAATGATGG...CTTCCAGCATTGAATGAAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CAA 90 bp GCAGGGGACCTCATTCCTAGTGCCCACCATAGGCAACCCTCTGCCCACTCTGAAGAGTCTGGCTCATCTTaGACCTTTGCATCATCCAAT +
Preference number: 5 (lower is better)
Translates to: AGDLIPSAHHRQPSAHSEESGSS*TFASSN
Trigger: ATTGGATGATGCAAAGGTCAAAGATGAGCCAGACTC...TTCAGAGTGGGCAGAGGGTTGCCTATGGTGGGCACTAGGAATGAGGTCCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp CTTGCCCCATCATTACAGGCATTGTGGTCAGAATGGTCCCACTGCTaGCCACCAGGGTCTAGAATAGGGACAGGTACACAGCAGAATGAT +
Preference number: 5 (lower is better)
Translates to: LAPSLQALWSEWSHC*PPGSRIGTGTQQND
Trigger: ATCATTCTGCTGTGTACCTGTCCCTATTCTAGACCCTGGTGGGCAGCAGTGGGACCATTCTGACCACAATGCCTGTAATGATGGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462539.1
CDS GCA 90 bp TCTCTTGCCCCATCATTACAGGCATTGTGGTCAGAATGGTCCCACTaGTGCCCACCAGGGTCTAGAATAGGGACAGGTACACAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: SLAPSLQALWSEWSH*CPPGSRIGTGTQQN
Trigger: ATTCTGCTGTGTACCTGTCCCTATTCTAGACCCTGGTGGGCAGCAGTGGGACCATTCTGACCACAATGCCTGTAATGATGGGGCAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462539.1
CDS CCA 90 bp CAAAGGCTGCTGGATGATCCTCGTCTGCGGAGTGGTGCTGAATGTTaGCGTGATCATTACCGTCTGTTGTTGCAGCTGAGTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QRLLDDPRLRSGAEC*RDHYRLLLQLSLRL
Trigger: CAACCTCAAACTCAGCTGCAACAACAGACGGTAATGATCACGCCAACATTCAGCACCACTCCGCAGACGAGGATCATCCAGCAGCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACAGGGAACTCTCCCACTaGATTACTGACAAATTGCAG +
Preference number: 5 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHRELSH*ITDKLQ
Trigger: CTGCAATTTGTCAGTAATCAAGTGGGAGAGTTCCCT...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCCCCATGGCAGCAGTCAGATGGATCTCAACCAGTGTGCTCGGTGGGATCTTCTAGGGAACTCTCCCACTaGATTACTGACAAATTGCAG +
Preference number: 5 (lower is better)
Translates to: APWQQSDGSQPVCSVGSSRELSH*ITDKLQ
Trigger: CTGCAATTTGTCAGTAATCAAGTGGGAGAGTTCCCT...AGAAGATCCCACCGAGCACACTGGTTGAGATCCATCTGACTGCTGCCATGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGACATTACCGTCTGTTGTaGCAGCTGAGTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: TLSGKMLRGRERNRERGGHYRLL*QLSLRL
Trigger: CAACCTCAAACTCAGCTGCAACAACAGACGGTAATG...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ACTCTCAGCGGGAAGATGCTGAGGGGGAGAGAGAGAAATCGAGAGAGAGGTGGAGATCATTACCGTCTGTaGTTGCAGCTGAGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: TLSGKMLRGRERNRERGGDHYRL*LQLSLR
Trigger: CCTCAAACTCAGCTGCAACAACAGACGGTAATGATC...TCCACCTCTCTCTCGATTTCTCTCTCTCCCCCTCAGCATCTTCCCGCTGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCAGACCCAGGGAGAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCGCTTGTTCTTTTGATTaGCCAGCTTCAGCACCATGT +
Preference number: 5 (lower is better)
Translates to: ADPGRESRRYSNSASHHGACSFD*PASAPC
Trigger: ACATGGTGCTGAAGCTGGCAAATCAAAAGAACAAGC...GCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTCTCCCTGGGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TGCTGCTATCAAGTCAGGGCTGCCCAGTTTCTGCCCTGCCACCTATCCTCTCACGCTTGTTCTTTTGATTaGCCAGCTTCAGCACCATGT +
Preference number: 5 (lower is better)
Translates to: CCYQVRAAQFLPCHLSSHACSFD*PASAPC
Trigger: ACATGGTGCTGAAGCTGGCAAATCAAAAGAACAAGC...GTGAGAGGATAGGTGGCAGGGCAGAAACTGGGCAGCCCTGACTTGATAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp CCCAGTCCTCCTCATGAGAAGATCAATGTCAAGCTCAAGAAGGGCTaGTGTCTAGATTCCTTGCCAACTATGCTCCCTGAGGACAAGGCA +
Preference number: 5 (lower is better)
Translates to: PSPPHEKINVKLKKG*CLDSLPTMLPEDKA
Trigger: TGCCTTGTCCTCAGGGAGCATAGTTGGCAAGGAATCTAGACAGCAGCCCTTCTTGAGCTTGACATTGATCTTCTCATGAGGAGGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS-3UTR CAA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGCATTACCGTCTGTTGTaGCAGCTGAGTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWHYRLL*QLSLRL
Trigger: CAACCTCAAACTCAGCTGCAACAACAGACGGTAATG...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACCACCAGGCTTTGGACTaGAGGCTGAAGGACTTGAAA +
Preference number: 5 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYHQALD*RLKDLK
Trigger: TTTCAAGTCCTTCAGCCTCAAGTCCAAAGCCTGGTG...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GAAAAGGCACAGGACATACACACAACACGCAGGCGGGCAGGGTCCATAAATTACCCATCATTACAGGCATaGTGGTCAGAATGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: EKAQDIHTTRRRAGSINYPSLQA*WSEWSH
Trigger: GTGGGACCATTCTGACCACAATGCCTGTAATGATGG...GTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp AGAGAAAGAAAGCAGGTGGGGTCCAAGCACACCCCAGGGATAACATTCCAGCCTAATGGGCACTTTCTCTaGCCCCATCATTACAGGCAT +
Preference number: 5 (lower is better)
Translates to: RERKQVGSKHTPGITFQPNGHFL*PHHYRH
Trigger: ATGCCTGTAATGATGGGGCAAGAGAAAGTGCCCATT...AGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp CTCCCTGGTGCTCAGAGACTGCTGTCCCCCAGAGAAAGCCTGATAAAAACTGAGAATGGGCACTTTCTCTaGCCCCATCATTACAGGCAT +
Preference number: 5 (lower is better)
Translates to: LPGAQRLLSPRESLIKTENGHFL*PHHYRH
Trigger: ATGCCTGTAATGATGGGGCAAGAGAAAGTGCCCATT...CTCAGTTTTTATCAGGCTTTCTCTGGGGGACAGCAGTCTCTGAGCACCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GCTGACTTCACAGACCAGCTCCGCTCCATGAAAAACTTCTGGCCCAGGGGGTGGACCAATCTGTGTTTATaGAATATGTCTGGGACACAG +
Preference number: 5 (lower is better)
Translates to: ADFTDQLRSMKNFWPRGWTNLCL*NMSGTQ
Trigger: CTGTGTCCCAGACATATTCAATAAACACAGATTGGT...CCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCTGTGAAGTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp AGAGTACACTGGGCTTCCCTGCGCCCTTTGTCCCCTAGACTATCGTaGTGTACCTCAGGAAATATATCAATGTCACTACAGGGCACGTTC +
Preference number: 5 (lower is better)
Translates to: RVHWASLRPLSPRLS*CTSGNISMSLQGTF
Trigger: GAACGTGCCCTGTAGTGACATTGATATATTTCCTGAGGTACATCACGATAGTCTAGGGGACAAAGGGCGCAGGGAAGCCCAGTGTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS GCA 90 bp GTAGCTGCATTCTGGTATATCAAAGGCTGCTGGATGATCCTCGTCTaGGGAGTGGTGCTGAATGTTGGCGTGATCATTACCGTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: VAAFWYIKGCWMILV*GVVLNVGVIITVCC
Trigger: ACAACAGACGGTAATGATCACGCCAACATTCAGCACCACTCCGCAGACGAGGATCATCCAGCAGCCTTTGATATACCAGAATGCAGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp ATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACACTGGTTGAGGCTGAAGGACTaGAAAGCTAGTAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: IKTLQQLSLASWQTQAHWLRLKD*KASSCI
Trigger: AATGCAGCTACTAGCTTTCAAGTCCTTCAGCCTCAA...CCAGTGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAGGATGTCACCAGGCTTaGGACTTGAGGCTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRGCHQA*DLRLKD
Trigger: GTCCTTCAGCCTCAAGTCCAAAGCCTGGTGACATCC...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CAA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAAATGGGCACTTTCTCTaGCCCCATCATTACAGGCAT +
Preference number: 5 (lower is better)
Translates to: ENQDATATQPRIMANPSTNGHFL*PHHYRH
Trigger: ATGCCTGTAATGATGGGGCAAGAGAAAGTGCCCATT...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp TCCCAGGGAGTGAGGCATGCATGGCTCTGCAGGCATGGAAGATGGCCTTCACCATGGTTCTTGTTCCTCTaGAAATGTGGATGTTTAACT +
Preference number: 5 (lower is better)
Translates to: SQGVRHAWLCRHGRWPSPWFLFL*KCGCLT
Trigger: AGTTAAACATCCACATTTCAAGAGGAACAAGAACCA...TGGTGAAGGCCATCTTCCATGCCTGCAGAGCCATGCATGCCTCACTCCCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS TCA 90 bp GAGCTACACAGCTGTTCTGAAAACAAGTCAGGGAACTCTCCCACTTaGTTACTGACAAATTGCAGCATCTCGTCGATGTCTCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ELHSCSENKSGNSPT*LLTNCSISSMSPRV
Trigger: GACCCTGGGAGACATCGACGAGATGCTGCAATTTGTCAGTAATCAAGTGGGAGAGTTCCCTGACTTGTTTTCAGAACAGCTGTGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAGAGTCTGGCTCATCTTaGACCTTTGCATCATCCAAT +
Preference number: 5 (lower is better)
Translates to: ENQDATATQPRIMANPSTESGSS*TFASSN
Trigger: ATTGGATGATGCAAAGGTCAAAGATGAGCCAGACTC...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GATGGCCACAGTGATTGCAGACGTCCACCACCGACAGATGATGTCTGGACCCAGTGGTTCTTGTTCCTCTaGAAATGTGGATGTTTAACT +
Preference number: 5 (lower is better)
Translates to: DGHSDCRRPPPTDDVWTQWFLFL*KCGCLT
Trigger: AGTTAAACATCCACATTTCAAGAGGAACAAGAACCA...CTGGGTCCAGACATCATCTGTCGGTGGTGGACGTCTGCAATCACTGTGGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS GCA 90 bp CTGGCTAAGATCAAGTGTAGACATAAAGAGTACACTGGGCTTCCCTaGGCCCTTTGTCCCCTAGACTATCGTGATGTACCTCAGGAAATA +
Preference number: 5 (lower is better)
Translates to: LAKIKCRHKEYTGLP*ALCPLDYRDVPQEI
Trigger: TATTTCCTGAGGTACATCACGATAGTCTAGGGGACAAAGGGCGCAGGGAAGCCCAGTGTACTCTTTATGTCTACACTTGATCTTAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS-3UTR CAA 90 bp GAGAATCAAGACGCTACAGCAACTCAGCCTCGCATCATGGCAAACCCAAGCACAACCAATCTGTGTTTATaGAATATGTCTGGGACACAG +
Preference number: 5 (lower is better)
Translates to: ENQDATATQPRIMANPSTTNLCL*NMSGTQ
Trigger: CTGTGTCCCAGACATATTCAATAAACACAGATTGGT...TGTGCTTGGGTTTGCCATGATGCGAGGCTGAGTTGCTGTAGCGTCTTGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS-3UTR CAA 90 bp GATAGGACCTCGTGGGGCCTTTCTGTCTTGGAGCATTTTACAGTTTCTCTTAGAGAGTCTGGCTCATCTTaGACCTTTGCATCATCCAAT +
Preference number: 5 (lower is better)
Translates to: DRTSWGLSVLEHFTVSLRESGSS*TFASSN
Trigger: ATTGGATGATGCAAAGGTCAAAGATGAGCCAGACTC...TCTAAGAGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCACGAGGTCCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS-3UTR CAA 90 bp AAGAAGCCACCCAAGATAGTCATTCCAACGTGTGCCTCAGTTTCCTTACTCTTCTGGGGCCTTTCTGTCTaGGAGCATTTTACAGTTTCT +
Preference number: 5 (lower is better)
Translates to: KKPPKIVIPTCASVSLLFWGLSV*EHFTVS
Trigger: AGAAACTGTAAAATGCTCCAAGACAGAAAGGCCCCA...GAAGAGTAAGGAAACTGAGGCACACGTTGGAATGACTATCTTGGGTGGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424354.5
CDS TCA 90 bp ACAAGGCAAATGTCCTGCTTAGAGACGGTGCTCAGTCATATTTGCTaGATGAGTGAATCAAGGGATGAGTCTCTTATCTGTAGTCACCAG +
Preference number: 5 (lower is better)
Translates to: TRQMSCLETVLSHIC*MSESRDESLICSHQ
Trigger: CTGGTGACTACAGATAAGAGACTCATCCCTTGATTCACTCATTCAGCAAATATGACTGAGCACCGTCTCTAAGCAGGACATTTGCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS GCA 72 bp CCGACAACCCCCGCCCGGCACCGCCTCACCGACGGGTaGCACCCGCCGCCATGTTTGCGTTGCGCCCGGGCG +
Preference number: 6 (lower is better)
Translates to: PTTPARHRLTDG*HPPPCLRCARA
Trigger: CGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAGGCGGTGCCGGGCGGGGGTTGTCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361204.9
ENST00000612482.4
CDS CAA 90 bp CCGGCACCGCCTCACCGACGGGTGCCACCCGCCGCCATGTTTGCGTaGCGCCCGGGCGCCGCACAGAAAGGGCGGGGCGGGATTCCCCCG +
Preference number: 6 (lower is better)
Translates to: PAPPHRRVPPAAMFA*RPGAAQKGRGGIPP
Trigger: CGGGGGAATCCCGCCCCGCCCTTTCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAGGCGGTGCCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS CAA 90 bp CCCGCCCGGCACCGCCTCACCGACGGGTGCCACCCGCCGCCATGTTaGCGTTGCGCCCGGGCGCCGCACAGAAAGGGCGGGGCGGGATTC +
Preference number: 6 (lower is better)
Translates to: PARHRLTDGCHPPPC*RCARAPHRKGGAGF
Trigger: GAATCCCGCCCCGCCCTTTCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAGGCGGTGCCGGGCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS CAA 72 bp CCTCACCGACGGGTGCCACCCGCCGCCATGTTTGCGTaGCGCCCGGGCGCCGCACAGAAAGGGCGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: PHRRVPPAAMFA*RPGAAQKGRGG
Trigger: CCCGCCCCGCCCTTTCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS GCA 72 bp CTCACCGACGGGTGCCACCCGCCGCCATGTTTGCGTTaGGCCCGGGCGCCGCACAGAAAGGGCGGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: LTDGCHPPPCLR*ARAPHRKGGAG
Trigger: TCCCGCCCCGCCCTTTCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS GCA 72 bp ACCGCCTCACCGACGGGTGCCACCCGCCGCCATGTTTaGGTTGCGCCCGGGCGCCGCACAGAAAGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: TASPTGATRRHV*VAPGRRTERAG
Trigger: CCCCGCCCTTTCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAGGCGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS CAA 72 bp CACCGCCTCACCGACGGGTGCCACCCGCCGCCATGTTaGCGTTGCGCCCGGGCGCCGCACAGAAAGGGCGGG +
Preference number: 6 (lower is better)
Translates to: HRLTDGCHPPPC*RCARAPHRKGG
Trigger: CCCGCCCTTTCTGTGCGGCGCCCGGGCGCAACGCAAACATGGCGGCGGGTGGCACCCGTCGGTGAGGCGGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612482.4
CDS GCA 72 bp GGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATTGCTaGTGCTGCTGCTGCTGCCACTGCTGCCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GPQLRCCCPCHC*CCCCCHCCRCC
Trigger: GCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp AAGGGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATTaGTGCTGCTGCTGCTGCTGCCACTGCTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: KGPQLRCCCPCH*CCCCCCHCCRC
Trigger: GCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp ACCGGGACCTGCTGCACCTGTGGCGCAGCAACTGTCTaGACCGTAGCCGGGGCAAGGGTCTGCAGCGTGCCA +
Preference number: 6 (lower is better)
Translates to: TGTCCTCGAATV*TVAGARVCSVP
Trigger: TGGCACGCTGCAGACCCTTGCCCCGGCTACGGTGCAGACAGTTGCTGCGCCACAGGTGCAGCAGGTCCCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 72 bp CTGAGGCTGGACCAGGACCGGGACCTGCTGCACCTGTaGCGCAGCAACTGTCTGCACCGTAGCCGGGGCAAG +
Preference number: 6 (lower is better)
Translates to: LRLDQDRDLLHL*RSNCLHRSRGK
Trigger: CTTGCCCCGGCTACGGTGCAGACAGTTGCTGCGCCACAGGTGCAGCAGGTCCCGGTCCTGGTCCAGCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 72 bp GAAGGGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATaGCTGCTGCTGCTGCTGCTGCCACTGCTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: EGSTAPLLLPLP*LLLLLLPLLPL
Trigger: CAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 72 bp CGATGTCTCCCAGGGTCAGCTCGTCGCCCAGCTCCGTaGGGGTCTCCATGGTCTCCAGACCACCCAGCTCGC +
Preference number: 6 (lower is better)
Translates to: RCLPGSARRPAP*GSPWSPDHPAR
Trigger: GCGAGCTGGGTGGTCTGGAGACCATGGAGACCCTCACGGAGCTGGGCGACGAGCTGACCCTGGGAGACATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp GCACTGAAGGGTCCACAGCTCCGCTGCTGCTGCCCCTaGCATTGCTGCTGCTGCTGCTGCTGCCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: ALKGPQLRCCCP*HCCCCCCCHCC
Trigger: GCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTCAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 72 bp AAGCCTGCCTCAGTGGCTGGCGTGGCCCGCCGGCACTaGAAGACTTTCTTGAGCAGCCAGCGCACCAGGCGT +
Preference number: 6 (lower is better)
Translates to: KPASVAGVARRH*KTFLSSQRTRR
Trigger: ACGCCTGGTGCGCTGGCTGCTCAAGAAAGTCTTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 90 bp CGTTGCACTGAAGGGTCCACAGCTCCGCTGCTGCTGCCCCTGCCATaGCTGCTGCTGCTGCTGCTGCCACTGCTGCCGCTGCTGCTACCA +
Preference number: 6 (lower is better)
Translates to: RCTEGSTAPLLLPLP*LLLLLLPLLPLLLP
Trigger: TGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTCAGTGCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 90 bp CTGCACCGTAGCCGGGGCAAGGGTCTGCAGCGTGCCATTGGCCGTTaGTGTCAGCACCCGCTGGGCCTGTACTGTCTGCACCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LHRSRGKGLQRAIGR*CQHPLGLYCLHLLL
Trigger: CAGCAGCAGGTGCAGACAGTACAGGCCCAGCGGGTGCTGACACAAACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGCTACGGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp TGCTGCTGCCCCTGCCATTGCTGCTGCTGCTGCTGCTaGCACTGCTGCCGCTGCTGCTACCACTACCACCAC +
Preference number: 6 (lower is better)
Translates to: CCCPCHCCCCCC*HCCRCCYHYHH
Trigger: GTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp ACCGTTGCACTGAAGGGTCCACAGCTCCGCTGCTGCTaGCCCTGCCATTGCTGCTGCTGCTGCTGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: TVALKGPQLRCC*PCHCCCCCCCH
Trigger: GTGGCAGCAGCAGCAGCAGCAGCAATGGCAGGGGCAGCAGCAGCGGAGCTGTGGACCCTTCAGTGCAACGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp GCAGCAACTGTCTGCACCGTAGCCGGGGCAAGGGTCTaGAGCGTGCCATTGGCCGTTTGTGTCAGCACCCGC +
Preference number: 6 (lower is better)
Translates to: AATVCTVAGARV*SVPLAVCVSTR
Trigger: GCGGGTGCTGACACAAACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGCTACGGTGCAGACAGTTGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp ATCCCGGGCGCTGGTCTTAGCTTCGTCTTCAAAGCCTaGCTCAGTGGCTGGCGTGGCCCGCCGGCACTGGAA +
Preference number: 6 (lower is better)
Translates to: IPGAGLSFVFKA*LSGWRGPPALE
Trigger: TTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTTTGAAGACGAAGCTAAGACCAGCGCCCGGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 72 bp CCGGTGCCTCCAGAAGGTGACCGAGGAGCGCGAGTGTaGCCGGATCACTGGCTCCCCATGAACCAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: PVPPEGDRGARV*PDHWLPMNQQL
Trigger: AAGCTGCTGGTTCATGGGGAGCCAGTGATCCGGCCACACTCGCGCTCCTCGGTCACCTTCTGGAGGCACCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 72 bp AGCCGGGGCAAGGGTCTGCAGCGTGCCATTGGCCGTTaGTGTCAGCACCCGCTGGGCCTGTACTGTCTGCAC +
Preference number: 6 (lower is better)
Translates to: SRGKGLQRAIGR*CQHPLGLYCLH
Trigger: GTGCAGACAGTACAGGCCCAGCGGGTGCTGACACAAACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 72 bp TGCACCGTAGCCGGGGCAAGGGTCTGCAGCGTGCCATaGGCCGTTTGTGTCAGCACCCGCTGGGCCTGTACT +
Preference number: 6 (lower is better)
Translates to: CTVAGARVCSVP*AVCVSTRWACT
Trigger: AGTACAGGCCCAGCGGGTGCTGACACAAACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGCTACGGTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 90 bp GCAACTGTCTGCACCGTAGCCGGGGCAAGGGTCTGCAGCGTGCCATaGGCCGTTTGTGTCAGCACCCGCTGGGCCTGTACTGTCTGCACC +
Preference number: 6 (lower is better)
Translates to: ATVCTVAGARVCSVP*AVCVSTRWACTVCT
Trigger: GGTGCAGACAGTACAGGCCCAGCGGGTGCTGACACAAACGGCCAATGGCACGCTGCAGACCCTTGCCCCGGCTACGGTGCAGACAGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 72 bp TGGATAGGGGTGGTGAGGGCGGTGAGGGCCGGGTTCTaGACCGCAGCCATAACAGGGCTGCCATCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: WIGVVRAVRAGF*TAAITGLPSVF
Trigger: GAAGACAGATGGCAGCCCTGTTATGGCTGCGGTCCAGAACCCGGCCCTCACCGCCCTCACCACCCCTATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp GGTGTGGTGGGAACTGAGGTGGGAGAAACCTTGACTTaGAGAGTTGGAGCCTGTGGGGAGGCCGCCGAGGGA +
Preference number: 6 (lower is better)
Translates to: GVVGTEVGETLT*RVGACGEAAEG
Trigger: TCCCTCGGCGGCCTCCCCACAGGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCTCAGTTCCCACCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp TCTCCTCTGGCGAGATCCAGATCTGCCTGTTTCCGGTaGCTCCAGAAGGTGACCGAGGAGCGCGAGTGTGGC +
Preference number: 6 (lower is better)
Translates to: SPLARSRSACFR*LQKVTEERECG
Trigger: GCCACACTCGCGCTCCTCGGTCACCTTCTGGAGGCACCGGAAACAGGCAGATCTGGATCTCGCCAGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361204.9
CDS GCA 72 bp ACTCCTCTGGCGAGATCCAGATCTGCCTGTTTCCGGTaGCTCCAGAAGGTGACCGAGGAGCGCGAGTGTGGC +
Preference number: 6 (lower is better)
Translates to: TPLARSRSACFR*LQKVTEERECG
Trigger: GCCACACTCGCGCTCCTCGGTCACCTTCTGGAGGCACCGGAAACAGGCAGATCTGGATCTCGCCAGAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS CAA 90 bp ATAGGAGTTGCCCTGGGTGTGGTGGGAACTGAGGTGGGAGAAACCTaGACTTGCAGAGTTGGAGCCTGTGGGGAGGCCGCCGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: IGVALGVVGTEVGET*TCRVGACGEAAEGE
Trigger: CTCTCCCTCGGCGGCCTCCCCACAGGCTCCAACTCTGCAAGTCAAGGTTTCTCCCACCTCAGTTCCCACCACACCCAGGGCAACTCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 72 bp GCTGCCACTATGGCACCATGCCACCAGCTCCAGATCTaGAATGCCAGCCCTGAGCTAGGGTTAGCGCCCCAC +
Preference number: 6 (lower is better)
Translates to: AATMAPCHQLQI*NASPELGLAPH
Trigger: GTGGGGCGCTAACCCTAGCTCAGGGCTGGCATTTCAGATCTGGAGCTGGTGGCATGGTGCCATAGTGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS GCA 72 bp GTGCCCGGCCCAAAACTGCCAGGCAGGTTTGTAGGTTaGCGGCAGCAGCTGCAAAATCTCCTGCTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: VPGPKLPGRFVG*RQQLQNLLLLR
Trigger: CCTCAGCAGCAGGAGATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCCTGGCAGTTTTGGGCCGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp CTGCAGGGAGGAGGACCCGGACACAGTGCTGACAGCTaGTGGGACAACTGTCGTGTTGTGCAGAGCAGGACA +
Preference number: 6 (lower is better)
Translates to: LQGGGPGHSADS*WDNCRVVQSRT
Trigger: TGTCCTGCTCTGCACAACACGACAGTTGTCCCAGCAGCTGTCAGCACTGTGTCCGGGTCCTCCTCCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS GCA 72 bp TGCAGGCATGGAAGATGGCCTTCACCAGGGGGCTCCTaGAGCAGTGACAGGGAGTCGAGAGGCAGGTCACTA +
Preference number: 6 (lower is better)
Translates to: CRHGRWPSPGGS*SSDRESRGRSL
Trigger: TAGTGACCTGCCTCTCGACTCCCTGTCACTGCTGCAGGAGCCCCCTGGTGAAGGCCATCTTCCATGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS CCA 72 bp GAAGGTGACCGAGGAGCGCGAGTGTGGCCGGATCACTaGCTCCCCATGAACCAGCAGCTTCACAAAGACGCT +
Preference number: 6 (lower is better)
Translates to: EGDRGARVWPDH*LPMNQQLHKDA
Trigger: AGCGTCTTTGTGAAGCTGCTGGTTCATGGGGAGCCAGTGATCCGGCCACACTCGCGCTCCTCGGTCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 90 bp GAGGTGGGCAGTGCCCGGCCCAAAACTGCCAGGCAGGTTTGTAGGTaGCCGGCAGCAGCTGCAAAATCTCCTCTGGCGAGATCCAGATCT +
Preference number: 6 (lower is better)
Translates to: EVGSARPKTARQVCR*PAAAAKSPLARSRS
Trigger: AGATCTGGATCTCGCCAGAGGAGATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCCTGGCAGTTTTGGGCCGGGCACTGCCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361204.9
CDS CAA 90 bp GAGGTGGGCAGTGCCCGGCCCAAAACTGCCAGGCAGGTTTGTAGGTaGCCGGCAGCAGCTGCAAAATCTCCTGCTGCTGAGGAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: EVGSARPKTARQVCR*PAAAAKSPAAEECS
Trigger: AGAACACTCCTCAGCAGCAGGAGATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCCTGGCAGTTTTGGGCCGGGCACTGCCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424354.5
ENST00000612482.4
CDS TCA 72 bp GAGGCACAGGAAGGTGAGGACACACAGAAGAATCCGTaGGCGGTCTACCATGCCCAGCGCCACAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: EAQEGEDTQKNP*AVYHAQRHRRR
Trigger: TCTCCTCCTGTGGCGCTGGGCATGGTAGACCGCTCACGGATTCTTCTGTGTGTCCTCACCTTCCTGTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000462539.1
ENST00000464119.1
ENST00000612482.4
CDS TCA 72 bp ATGAAGGCTGCAGGGAGGAGGACCCGGACACAGTGCTaGCAGCTGCTGGGACAACTGTCGTGTTGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: MKAAGRRTRTQC*QLLGQLSCCAE
Trigger: CTCTGCACAACACGACAGTTGTCCCAGCAGCTGTCAGCACTGTGTCCGGGTCCTCCTCCCTGCAGCCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS TCA 72 bp TGGAAGATGGCCTTCACCAGGGGGCTCCTGCAGCAGTaGCAGGGAGTCGAGAGGCAGGTCACTATGTGTCAC +
Preference number: 6 (lower is better)
Translates to: WKMAFTRGLLQQ*QGVERQVTMCH
Trigger: GTGACACATAGTGACCTGCCTCTCGACTCCCTGTCACTGCTGCAGGAGCCCCCTGGTGAAGGCCATCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS GCA 72 bp GTGCCCGGCCCAAAACTGCCAGGCAGGTTTGTAGGTTaGCGGCAGCAGCTGCAAAATCTCCTCTGGCGAGAT +
Preference number: 6 (lower is better)
Translates to: VPGPKLPGRFVG*RQQLQNLLWRD
Trigger: ATCTCGCCAGAGGAGATTTTGCAGCTGCTGCCGGCAACCTACAAACCTGCCTGGCAGTTTTGGGCCGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361204.9
CDS GCA 72 bp TCGTCTCTTCTTTTCAGCCTGTGGCGCCATGAAGGCTaGAGGGAGGAGGACCCGGACACAGTGCTGACAGCT +
Preference number: 6 (lower is better)
Translates to: SSLLFSLWRHEG*REEDPDTVLTA
Trigger: AGCTGTCAGCACTGTGTCCGGGTCCTCCTCCCTGCAGCCTTCATGGCGCCACAGGCTGAAAAGAAGAGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS CCA 72 bp GGTCTTAGCTTCGTCTTCAAAGCCTGCCTCAGTGGCTaGCGTGGCCCGCCGGCACTGGAAGACTTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: GLSFVFKACLSG*RGPPALEDFLE
Trigger: CTCAAGAAAGTCTTCCAGTGCCGGCGGGCCACGCCAGCCACTGAGGCAGGCTTTGAAGACGAAGCTAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 72 bp ACCATGCCACCAGCTCCAGATCTGAAATGCCAGCCCTaGGCTAGGGTTAGCGCCCCACCCTTTAGCACCTTC +
Preference number: 6 (lower is better)
Translates to: TMPPAPDLKCQP*ARVSAPPFSTF
Trigger: GAAGGTGCTAAAGGGTGGGGCGCTAACCCTAGCTCAGGGCTGGCATTTCAGATCTGGAGCTGGTGGCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490262.1
CDS GCA 72 bp CGTGTTGTGCAGAGCAGGACACTTGCACAGAGGACCTaGTGGCCCAACTTGAGTTCTCCATGGTGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: RVVQSRTLAQRT*WPNLSSPWCPH
Trigger: GTGAGGGCACCATGGAGAACTCAAGTTGGGCCAGCAGGTCCTCTGTGCAAGTGTCCTGCTCTGCACAACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS CCA 72 bp GAGGCCGCCGAGGGAGAGAAGGAAGGTAATGTGACCTaGGTGAATGACCGTTGCACTGAAGGGTCCACAGCT +
Preference number: 6 (lower is better)
Translates to: EAAEGEKEGNVT*VNDRCTEGSTA
Trigger: AGCTGTGGACCCTTCAGTGCAACGGTCATTCACCCAGGTCACATTACCTTCCTTCTCTCCCTCGGCGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 72 bp AAGGCCTGCTTTTCCCAACTGGTGACAAGAAAGCCCTaGACGCACCTCGTGGGGCTGGTAGACAAGTGCCCT +
Preference number: 6 (lower is better)
Translates to: KACFSQLVTRKP*THLVGLVDKCP
Trigger: AGGGCACTTGTCTACCAGCCCCACGAGGTGCGTCCAGGGCTTTCTTGTCACCAGTTGGGAAAAGCAGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435061.1
CDS CAA 72 bp AGCAGGACACTTGCACAGAGGACCTGCTGGCCCAACTaGAGTTCTCCATGGTGCCCTCACCCCCGACTTTTC +
Preference number: 6 (lower is better)
Translates to: SRTLAQRTCWPN*SSPWCPHPRLF
Trigger: GAAAAGTCGGGGGTGAGGGCACCATGGAGAACTCAAGTTGGGCCAGCAGGTCCTCTGTGCAAGTGTCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS GCA 72 bp CCATCATTACAGGCATTGTGGTCAGAATGGTCCCACTaGTGCCCACCAGGGTTGGTACTTGAAGGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: PSLQALWSEWSH*CPPGLVLEGQP
Trigger: CGGCTGCCCTTCAAGTACCAACCCTGGTGGGCAGCAGTGGGACCATTCTGACCACAATGCCTGTAATGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp AGCAGCTGCAAAATCTCCTCTGGCGAGATCCAGATCTaGCTGTTTCCGGTGCCTCCAGAAGGTGACCGAGGA +
Preference number: 6 (lower is better)
Translates to: SSCKISSGEIQI*LFPVPPEGDRG
Trigger: TCCTCGGTCACCTTCTGGAGGCACCGGAAACAGGCAGATCTGGATCTCGCCAGAGGAGATTTTGCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361204.9
CDS GCA 72 bp AGTGCACATGAGTTTTGGGGGCAACAGTGGCCTCTCTaGACTGATTGTGAACCACCAGTGCCTGCCTCCACC +
Preference number: 6 (lower is better)
Translates to: SAHEFWGQQWPL*TDCEPPVPAST
Trigger: GGTGGAGGCAGGCACTGGTGGTTCACAATCAGTGCAGAGAGGCCACTGTTGCCCCCAAAACTCATGTGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS CAA 72 bp CTGACCCTTCACCCCAACACGCCCACCCAGTCCAGTTaGCTCCTGCTAACTCAAACAAGATTCCCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LTLHPNTPTQSS*LLLTQTRFPWR
Trigger: TCTCCAGGGGAATCTTGTTTGAGTTAGCAGGAGCAAACTGGACTGGGTGGGCGTGTTGGGGTGAAGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463741.1
CDS GCA 72 bp TTTGTTAGTCTGCATAAAGCAACCTCAACACAGACCTaGCCGCTTTGGCCAAGTGCTGCCAGACCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: FVSLHKATSTQT*PLWPSAARPGS
Trigger: ACTGCCAGGTCTGGCAGCACTTGGCCAAAGCGGGCAGGTCTGTGTTGAGGTTGCTTTATGCAGACTAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462539.1
CDS GCA 72 bp CCTCGATCTTCAGGTCCACCTCATTGTCCACCAGACTaGCTAGGTCGATGCCCTTTAGAAGCTCTGCAAAGA +
Preference number: 6 (lower is better)
Translates to: PRSSGPPHCPPD*LGRCPLEALQR
Trigger: TCTTTGCAGAGCTTCTAAAGGGCATCGACCTAGGCAGTCTGGTGGACAATGAGGTGGACCTGAAGATCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464119.1
CDS CCA 72 bp CTGGATGATCCTCGTCTGCGGAGTGGTGCTGAATGTTaGCGTGATCATTACCGTCTGTTGTTGCAGCTGAGT +
Preference number: 6 (lower is better)
Translates to: LDDPRLRSGAEC*RDHYRLLLQLS
Trigger: ACTCAGCTGCAACAACAGACGGTAATGATCACGCCAACATTCAGCACCACTCCGCAGACGAGGATCATCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CCA 72 bp TCTCTTGCCCCATCATTACAGGCATTGTGGTCAGAATaGTCCCACTGCTGCCCACCAGGGTTGGTACTTGAA +
Preference number: 6 (lower is better)
Translates to: SLAPSLQALWSE*SHCCPPGLVLE
Trigger: TTCAAGTACCAACCCTGGTGGGCAGCAGTGGGACCATTCTGACCACAATGCCTGTAATGATGGGGCAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 72 bp AGTGGTGCTGAATGTTGGCGTGATCATTACCGTCTGTaGTTGCAGCTGAGTTTGAGGTTGAGGCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SGAECWRDHYRL*LQLSLRLRLGL
Trigger: CAGCCCCAGCCTCAACCTCAAACTCAGCTGCAACAACAGACGGTAATGATCACGCCAACATTCAGCACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 72 bp CGGCTGTACCTGGGAGGATGTCACCAGGCTTTGGACTaGAGGCTGAAGGACTTGAAAGCTAGTAGCTGCATT +
Preference number: 6 (lower is better)
Translates to: RLYLGGCHQALD*RLKDLKASSCI
Trigger: AATGCAGCTACTAGCTTTCAAGTCCTTCAGCCTCAAGTCCAAAGCCTGGTGACATCCTCCCAGGTACAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp ACTCCCCCAGGTACCTGCTTAATGGGCACTTTCTCTTaGCCCATCATTACAGGCATTGTGGTCAGAATGGTC +
Preference number: 6 (lower is better)
Translates to: TPPGTCLMGTFS*PIITGIVVRMV
Trigger: GACCATTCTGACCACAATGCCTGTAATGATGGGGCAAGAGAAAGTGCCCATTAAGCAGGTACCTGGGGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000462539.1
ENST00000612482.4
CDS CAA 72 bp CAAGTCAGGGAACTCTCCCACTTGATTACTGACAAATaGCAGCATCTCGTCGATGTCTCCCAGGGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: QVRELSHLITDK*QHLVDVSQGQL
Trigger: GAGCTGACCCTGGGAGACATCGACGAGATGCTGCAATTTGTCAGTAATCAAGTGGGAGAGTTCCCTGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp TTCTGGTATATCAAAGGCTGCTGGATGATCCTCGTCTaGGGAGTGGTGCTGAATGTTGGCGTGATCATTACC +
Preference number: 6 (lower is better)
Translates to: FWYIKGCWMILV*GVVLNVGVIIT
Trigger: GGTAATGATCACGCCAACATTCAGCACCACTCCGCAGACGAGGATCATCCAGCAGCCTTTGATATACCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp CCTCGATCTTCAGGTCCACCTCATTGTCCACCAGACTaGCTAGGTCGATGCCCTTTAGAAGCTTGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: PRSSGPPHCPPD*LGRCPLEACSF
Trigger: AAAAGAACAAGCTTCTAAAGGGCATCGACCTAGGCAGTCTGGTGGACAATGAGGTGGACCTGAAGATCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000462539.1
ENST00000612482.4
CDS TCA 72 bp ACCACCACTGCCAGGAAAGGAGCTACACAGCTGTTCTaGAAACAAGTCAGGGAACTCTCCCACTTGATTACT +
Preference number: 6 (lower is better)
Translates to: TTTARKGATQLF*KQVRELSHLIT
Trigger: AGTAATCAAGTGGGAGAGTTCCCTGACTTGTTTTCAGAACAGCTGTGTAGCTCCTTTCCTGGCAGTGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS GCA 72 bp ATCAAGTGTAGACATAAAGAGTACACTGGGCTTCCCTaGGCCCTTTGTCCCCTAGACTATCGTGATGTACCT +
Preference number: 6 (lower is better)
Translates to: IKCRHKEYTGLP*ALCPLDYRDVP
Trigger: AGGTACATCACGATAGTCTAGGGGACAAAGGGCGCAGGGAAGCCCAGTGTACTCTTTATGTCTACACTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS GCA 72 bp CCTCATGAGAAGATCAATGTCAAGCTCAAGAAGGGCTaGTGTCTAGATTCCTTGCCAACTATGCTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: PHEKINVKLKKG*CLDSLPTMLPE
Trigger: CTCAGGGAGCATAGTTGGCAAGGAATCTAGACAGCAGCCCTTCTTGAGCTTGACATTGATCTTCTCATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS CCA 72 bp AAGCTAGTAGCTGCATTCTGGTATATCAAAGGCTGCTaGATGATCCTCGTCTGCGGAGTGGTGCTGAATGTT +
Preference number: 6 (lower is better)
Translates to: KLVAAFWYIKGC*MILVCGVVLNV
Trigger: AACATTCAGCACCACTCCGCAGACGAGGATCATCCAGCAGCCTTTGATATACCAGAATGCAGCTACTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS CAA 90 bp GAGAAGATCAATGTCAAGCTCAAGAAGGGCTGCTGTCTAGATTCCTaGCCAACTATGCTCCCTGAGGACAAGGCAAATGTCCTGCTTAGA +
Preference number: 6 (lower is better)
Translates to: EKINVKLKKGCCLDS*PTMLPEDKANVLLR
Trigger: TCTAAGCAGGACATTTGCCTTGTCCTCAGGGAGCATAGTTGGCAAGGAATCTAGACAGCAGCCCTTCTTGAGCTTGACATTGATCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS TCA 72 bp ACCAATAGTCCGTCCTTCCTCTTTGGTAACCAGTGTTaGTACTGGATACTGGAGAACAAATGTAGAGGACCC +
Preference number: 6 (lower is better)
Translates to: TNSPSFLFGNQC*YWILENKCRGP
Trigger: GGGTCCTCTACATTTGTTCTCCAGTATCCAGTATCAACACTGGTTACCAAAGAGGAAGGACGGACTATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS GCA 72 bp TTGGACTTGAGGCTGAAGGACTTGAAAGCTAGTAGCTaGATTCTGGTATATCAAAGGCTGCTGGATGATCCT +
Preference number: 6 (lower is better)
Translates to: LDLRLKDLKASS*ILVYQRLLDDP
Trigger: AGGATCATCCAGCAGCCTTTGATATACCAGAATGCAGCTACTAGCTTTCAAGTCCTTCAGCCTCAAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 72 bp AGCTGTTCTGAAAACAAGTCAGGGAACTCTCCCACTTaGTTACTGACAAATTGCAGCATCTCGTCGATGTCT +
Preference number: 6 (lower is better)
Translates to: SCSENKSGNSPT*LLTNCSISSMS
Trigger: AGACATCGACGAGATGCTGCAATTTGTCAGTAATCAAGTGGGAGAGTTCCCTGACTTGTTTTCAGAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361204.9
ENST00000424354.5
ENST00000612482.4
CDS TCA 72 bp ATGTCCTGCTTAGAGACGGTGCTCAGTCATATTTGCTaGATGAGTGAATCAAGGGATGAGTCTCTTATCTGT +
Preference number: 6 (lower is better)
Translates to: MSCLETVLSHIC*MSESRDESLIC
Trigger: ACAGATAAGAGACTCATCCCTTGATTCACTCATTCAGCAAATATGACTGAGCACCGTCTCTAAGCAGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491541.1
CDS TCA 72 bp TCAGGAAATATATCAATGTCACTACAGGGCACGTTCTaGTTCATTCTCAGCTCATCTCTGCTGTTACTGAGA +
Preference number: 6 (lower is better)
Translates to: SGNISMSLQGTF*FILSSSLLLLR
Trigger: TCTCAGTAACAGCAGAGATGAGCTGAGAATGAATCAGAACGTGCCCTGTAGTGACATTGATATATTTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491541.1