RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SREBF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000072310

Ensembl transcript IDs: ENST00000261646.10, ENST00000261646.11, ENST00000355815.8, ENST00000395751.8, ENST00000395756.5, ENST00000395757.6, ENST00000423161.3, ENST00000447641.5, ENST00000469356.3, ENST00000470247.1, ENST00000471445.5, ENST00000476994.1, ENST00000478616.1, ENST00000485080.6, ENST00000487401.1, ENST00000490796.1, ENST00000577897.2, ENST00000578469.1, ENST00000580540.1, ENST00000581707.1, ENST00000583080.1, ENST00000583732.1, ENST00000584760.1, ENST00000662439.1

Found 903 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTGGGCAGGGGTCTCTCAGACTCCTGCAGCACCCGGGGCAGGTaGTCCACCAGCGGGCACAGCCGCTCAGCCGCCTCCTCATCCCGC +
Preference number: 1 (lower is better)
Translates to: ALGRGLSDSCSTRGR*STSGHSRSAASSSR
Trigger: GCGGGATGAGGAGGCGGCTGAGCGGCTGTGCCCGCTGGTGGAGCACCTGCCCCGGGTGCTGCAGGAGTCTGAGAGACCCCTGCCCAGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 90 bp GCTGACAGTCGTGCAGCAGCCGGCGATCGCCAAGCTTCTCGAGTGTaGGCGCCGCCTCAGCCAGCATGCCCACGCGCTGCCCGGGCGCCG +
Preference number: 1 (lower is better)
Translates to: ADSRAAAGDRQASRV*APPQPACPRAARAP
Trigger: CGGCGCCCGGGCAGCGCGTGGGCATGCTGGCTGAGGCGGCGCGCACACTCGAGAAGCTTGGCGATCGCCGGCTGCTGCACGACTGTCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp CTGCCCGCCGCCTCAGACTGCGGTCGAGGAGCTGGTGTGTCCGTGTaGGGCTGGCCCCCGCCATCAGCCGGGCCGTGGCCTCATGTAGGA +
Preference number: 1 (lower is better)
Translates to: LPAASDCGRGAGVSV*GWPPPSAGPWPHVG
Trigger: TCCTACATGAGGCCACGGCCCGGCTGATGGCGGGGGCCAGCCCCACACGGACACACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp GCCGCCTCAGACTGCGGTCGAGGAGCTGGTGTGTCCGTGTGGGGCTaGCCCCCGCCATCAGCCGGGCCGTGGCCTCATGTAGGAACACCC +
Preference number: 1 (lower is better)
Translates to: AASDCGRGAGVSVWG*PPPSAGPWPHVGTP
Trigger: GGGTGTTCCTACATGAGGCCACGGCCCGGCTGATGGCGGGGGCCAGCCCCACACGGACACACCAGCTCCTCGACCGCAGTCTGAGGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 90 bp AGGCGGGAGCGGTCCAGCATGCCCCGGCTGTGCAGAGACGGCCGCTaGTCTGGCTTTGCCTTACTGTGGGACCCCACGTGGCTCCAGGCC +
Preference number: 1 (lower is better)
Translates to: RRERSSMPRLCRDGR*SGFALLWDPTWLQA
Trigger: GGCCTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp AGCGGGCACAGCCGCTCAGCCGCCTCCTCATCCCGCCGCAGCCAGTaGATCACCACAGCTGTCAGAGAGGCCCACCACTTGGCCACCGGG +
Preference number: 1 (lower is better)
Translates to: SGHSRSAASSSRRSQ*ITTAVREAHHLATG
Trigger: CCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACTGGCTGCGGCGGGATGAGGAGGCGGCTGAGCGGCTGTGCCCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 90 bp AGAGGAAGACGAGCGTGCACAGGGCCAGGCGGGAGCGGTCCAGCATaGCCCGGCTGTGCAGAGACGGCCGCTGCTCTGGCTTTGCCTTAC +
Preference number: 1 (lower is better)
Translates to: RGRRACTGPGGSGPA*PGCAETAAALALPY
Trigger: GTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCCCGCCTGGCCCTGTGCACGCTCGTCTTCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp GGAGCGGTCCAGCATGCCCCGGCTGTGCAGAGACGGCCGCTGCTCTaGCTTTGCCTTACTGTGGGACCCCACGTGGCTCCAGGCCTCAGT +
Preference number: 1 (lower is better)
Translates to: GAVQHAPAVQRRPLL*LCLTVGPHVAPGLS
Trigger: ACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 90 bp GATCTCGGCCAGCGTCGCCACAGACACGGCATCCCCTGCACACTCTaGCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGCAGTGAGGTG +
Preference number: 1 (lower is better)
Translates to: DLGQRRHRHGIPCTL*QVQGTQRQVGGSEV
Trigger: CACCTCACTGCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCTGTGGCGACGCTGGCCGAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 90 bp CGCCACATAGATCTCGGCCAGCGTCGCCACAGACACGGCATCCCCTaGACACTCTGCCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGC +
Preference number: 1 (lower is better)
Translates to: RHIDLGQRRHRHGIP*TLCQVQGTQRQVGG
Trigger: GCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCTGTGGCGACGCTGGCCGAGATCTATGTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 90 bp CCACTGGGTTCCCGGCCAAGCTGTACAGGCTCTCCCATGGGGTACTaGGCACGGACCAGTCCCCATCCACGAAGAAACGGTGGCCCACGG +
Preference number: 1 (lower is better)
Translates to: PLGSRPSCTGSPMGY*ARTSPHPRRNGGPR
Trigger: CCGTGGGCCACCGTTTCTTCGTGGATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTACAGCTTGGCCGGGAACCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 90 bp CGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTaGTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGG +
Preference number: 1 (lower is better)
Translates to: RLSPTTEREASGAEP*LQSGKAKLASVSTG
Trigger: CCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR TCA 90 bp ACTTGGCCACCGGGTCTACGCCGGTGGTGGTGGCCATGCTGGAACTaGTGGAGAAGCTGTAGGCAGGAGCCCCCGCAGCATCAGAACAGC +
Preference number: 1 (lower is better)
Translates to: TWPPGLRRWWWPCWN*WRSCRQEPPQHQNS
Trigger: GCTGTTCTGATGCTGCGGGGGCTCCTGCCTACAGCTTCTCCATCAGTTCCAGCATGGCCACCACCACCGGCGTAGACCCGGTGGCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 90 bp CTGGAAGTGACAGTGGTCCCACCGCCCAGGCGCATGAGCATCTGCTaGCAGTCGTGCAGCAGCCGGCGATCGCCAAGCTTCTCGAGTGTG +
Preference number: 1 (lower is better)
Translates to: LEVTVVPPPRRMSIC*QSCSSRRSPSFSSV
Trigger: CACACTCGAGAAGCTTGGCGATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGGACCACTGTCACTTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 90 bp GTCCAGCATGCCCCGGCTGTGCAGAGACGGCCGCTGCTCTGGCTTTaGCTTACTGTGGGACCCCACGTGGCTCCAGGCCTCAGTTATTCT +
Preference number: 1 (lower is better)
Translates to: VQHAPAVQRRPLLWL*LTVGPHVAPGLSYS
Trigger: AGAATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp CGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTaGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCAAAGCTTCG +
Preference number: 1 (lower is better)
Translates to: RAFHREGTQQPQVEL*RPESLALPSAFKAS
Trigger: CGAAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR CCA 90 bp CAGGGGGTCCACTGGGTTCCCGGCCAAGCTGTACAGGCTCTCCCATaGGGTACTGAGCACGGACCAGTCCCCATCCACGAAGAAACGGTG +
Preference number: 1 (lower is better)
Translates to: QGVHWVPGQAVQALP*GTEHGPVPIHEETV
Trigger: CACCGTTTCTTCGTGGATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTACAGCTTGGCCGGGAACCCAGTGGACCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 90 bp CGTAGACAAAGAGAAGCACCAAGGAGACGAGCACCAACAGCCCATTaGGCAGCCAGACCACTGGGGGCAGCAGCCACTGGGCCCAGCCAG +
Preference number: 1 (lower is better)
Translates to: RRQREAPRRRAPTAH*AARPLGAAATGPSQ
Trigger: CTGGCTGGGCCCAGTGGCTGCTGCCCCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGCTCGTCTCCTTGGTGCTTCTCTTTGTCTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 90 bp TCGGCAAAGGCCCTGTCTGCACAGTGGTGCCAGAGACCAGGGGACTaGGACCTGCCGCCTTCACAGTGGCTCCGTCTGTCTTCATGGCTG +
Preference number: 1 (lower is better)
Translates to: SAKALSAQWCQRPGD*DLPPSQWLRLSSWL
Trigger: CAGCCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAGGTCTCAGTCCCCTGGTCTCTGGCACCACTGTGCAGACAGGGCCTTTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CCA 90 bp CACTGCATGGCAGGAGGCACTGAGCCACTCTGTGCCAGGCAGGCCTaGCGGGCACTGCTCAGGAAGAAGCGTGTCAGAAAATGCAAGGCC +
Preference number: 1 (lower is better)
Translates to: HCMAGGTEPLCARQA*RALLRKKRVRKCKA
Trigger: GGCCTTGCATTTTCTGACACGCTTCTTCCTGAGCAGTGCCCGCCAGGCCTGCCTGGCACAGAGTGGCTCAGTGCCTCCTGCCATGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 90 bp TGCGATGCCTCCAGAAGTACACGGCGGGGCCTGAGTGGGGCCGTGTaGCTGGCTCACCGTAGACAAAGAGAAGCACCAAGGAGACGAGCA +
Preference number: 1 (lower is better)
Translates to: CDASRSTRRGLSGAV*LAHRRQREAPRRRA
Trigger: TGCTCGTCTCCTTGGTGCTTCTCTTTGTCTACGGTGAGCCAGTCACACGGCCCCACTCAGGCCCCGCCGTGTACTTCTGGAGGCATCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 90 bp CACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTaGCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGG +
Preference number: 1 (lower is better)
Translates to: HSSRRSNCGGQSLLH*LRPSKLRRRTEAAR
Trigger: CCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR GCA 90 bp AGGCCCTGTCTGCACAGTGGTGCCAGAGACCAGGGGACTGAGACCTaGCGCCTTCACAGTGGCTCCGTCTGTCTTCATGGCTGTCAGAAG +
Preference number: 1 (lower is better)
Translates to: RPCLHSGARDQGTET*RLHSGSVCLHGCQK
Trigger: CTTCTGACAGCCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAGGTCTCAGTCCCCTGGTCTCTGGCACCACTGTGCAGACAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR GCA 90 bp AGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTaGACTGCCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTG +
Preference number: 1 (lower is better)
Translates to: RHTAAAGRTVEARVS*TAFGLQSFDAGQKL
Trigger: CAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR GCA 90 bp CACAGTGGCTCCGTCTGTCTTCATGGCTGTCAGAAGCAGCGAGTCTaGCTTGATGAAGTGGGGCTGCAGCAGGACCGGGACCTGCTGGAT +
Preference number: 1 (lower is better)
Translates to: HSGSVCLHGCQKQRV*LDEVGLQQDRDLLD
Trigger: ATCCAGCAGGTCCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGACAGCCATGAAGACAGACGGAGCCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR GCA 90 bp CCGGTTGATAGGCAGCTTCTCCGCATCTACGACCAGTGGGACTGTTaGCAAGATGGTTCCGCCACTCACCAGGGTCGGCAAAGGCCCTGT +
Preference number: 1 (lower is better)
Translates to: PVDRQLLRIYDQWDC*QDGSATHQGRQRPC
Trigger: ACAGGGCCTTTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CCA 90 bp AGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTaGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTAC +
Preference number: 1 (lower is better)
Translates to: RPLGQSPACSPGKPS*LPSAQGNVPLSSLY
Trigger: GTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR CCA 90 bp CCCCGGCTGTGCAGAGACGGCCGCTGCTCTGGCTTTGCCTTACTGTaGGACCCCACGTGGCTCCAGGCCTCAGTTATTCTGTCTATGAAA +
Preference number: 1 (lower is better)
Translates to: PRLCRDGRCSGFALL*DPTWLQASVILSMK
Trigger: TTTCATAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp AGCTGCGAGCCGGTTGATAGGCAGCTTCTCCGCATCTACGACCAGTaGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGGCAA +
Preference number: 1 (lower is better)
Translates to: SCEPVDRQLLRIYDQ*DCCQDGSATHQGRQ
Trigger: TTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR GCA 90 bp TGTCAGAAAATGCAAGGCCCGTGGGAGACTGGTCTTCACTCTCAATaGAGCCGCCACATAGATCTCGGCCAGCGTCGCCACAGACACGGC +
Preference number: 1 (lower is better)
Translates to: CQKMQGPWETGLHSQ*SRHIDLGQRRHRHG
Trigger: GCCGTGTCTGTGGCGACGCTGGCCGAGATCTATGTGGCGGCTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCTTGCATTTTCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp TACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTaGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTC +
Preference number: 1 (lower is better)
Translates to: YTMYTSLSHDGERGL*GRALLAVRESQVGF
Trigger: GAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR CCA 90 bp CGAGGGCATCCGAGAATTCCTTGTCCCCATCAGCTGACCCAGGGCTaGGGTTGGGCTGGGTCACACAGTTCAGTGCTCGCTCTAAGAGAT +
Preference number: 1 (lower is better)
Translates to: RGHPRIPCPHQLTQG*GWAGSHSSVLALRD
Trigger: ATCTCTTAGAGCGAGCACTGAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATTCTCGGATGCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp CATCCGAGAATTCCTTGTCCCCATCAGCTGACCCAGGGCTGGGGTTaGGCTGGGTCACACAGTTCAGTGCTCGCTCTAAGAGATGTTCCC +
Preference number: 1 (lower is better)
Translates to: HPRIPCPHQLTQGWG*AGSHSSVLALRDVP
Trigger: GGGAACATCTCTTAGAGCGAGCACTGAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATTCTCGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp AGAGACGGCCGCTGCTCTGGCTTTGCCTTACTGTGGGACCCCACGTaGCTCCAGGCCTCAGTTATTCTGTCTATGAAATGGGAGGTAGGA +
Preference number: 1 (lower is better)
Translates to: RDGRCSGFALLWDPT*LQASVILSMKWEVG
Trigger: TCCTACCTCCCATTTCATAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp TGCTCAGGAAGAAGCGTGTCAGAAAATGCAAGGCCCGTGGGAGACTaGTCTTCACTCTCAATGCAGCCGCCACATAGATCTCGGCCAGCG +
Preference number: 1 (lower is better)
Translates to: CSGRSVSENARPVGD*SSLSMQPPHRSRPA
Trigger: CGCTGGCCGAGATCTATGTGGCGGCTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTTCTTCCTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp GCGGGCACTGCTCAGGAAGAAGCGTGTCAGAAAATGCAAGGCCCGTaGGAGACTGGTCTTCACTCTCAATGCAGCCGCCACATAGATCTC +
Preference number: 1 (lower is better)
Translates to: AGTAQEEACQKMQGP*ETGLHSQCSRHIDL
Trigger: GAGATCTATGTGGCGGCTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTTCTTCCTGAGCAGTGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 90 bp GAGAATTCCTTGTCCCCATCAGCTGACCCAGGGCTGGGGTTGGGCTaGGTCACACAGTTCAGTGCTCGCTCTAAGAGATGTTCCCGGAAT +
Preference number: 1 (lower is better)
Translates to: ENSLSPSADPGLGLG*VTQFSARSKRCSRN
Trigger: ATTCCGGGAACATCTCTTAGAGCGAGCACTGAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 90 bp CCCTCTCCCCACCCTAGTCTCAGCCCACACACAAAGTCCACAGACTaGGTCACGCACGTGCAGTCATGTATCCCACAAATGACAGTCACC +
Preference number: 1 (lower is better)
Translates to: PSPHPSLSPHTKSTD*VTHVQSCIPQMTVT
Trigger: GGTGACTGTCATTTGTGGGATACATGACTGCACGTGCGTGACTCAGTCTGTGGACTTTGTGTGTGGGCTGAGACTAGGGTGGGGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR CCA 90 bp AAGTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTaGATTCCGACCAGATTCAGCTGGGAGCCGGGCCAGGCTTTAGGT +
Preference number: 1 (lower is better)
Translates to: KSIKIQRLFWKICSP*IPTRFSWEPGQALG
Trigger: ACCTAAAGCCTGGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261646.10
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
3UTR TCA 90 bp GCAGTCATGTATCCCACAAATGACAGTCACCCCACTGATTCCTTGTaGAAGGAATTGTCATCAGGTAACCATCAAGAAGATGCTTGGTCT +
Preference number: 1 (lower is better)
Translates to: AVMYPTNDSHPTDSL*KELSSGNHQEDAWS
Trigger: AGACCAAGCATCTTCTTGATGGTTACCTGATGACAATTCCTTTCACAAGGAATCAGTGGGGTGACTGTCATTTGTGGGATACATGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR CAA 90 bp GGGCCGGAAGCTCTGTGCCAGCCGCCTCAGGCTGCTCAGGTCCCGTaGGAAGCCACGCAGCTCAAGGGCGGAAGCCTGGGGCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: GPEALCQPPQAAQVP*EATQLKGGSLGPAA
Trigger: AGCAGCAGGCCCCAGGCTTCCGCCCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAGCCTGAGGCGGCTGGCACAGAGCTTCCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR TCA 90 bp AGAGAGGCCCACCACTTGGCCACCGGGTCTACGCCGGTGGTGGTGGCCATGCTGGTACACGGCGGGGCCTaGGTGGGGCCGTGTGACTGG +
Preference number: 2 (lower is better)
Translates to: REAHHLATGSTPVVVAMLVHGGA*VGPCDW
Trigger: CCAGTCACACGGCCCCACTCAGGCCCCGCCGTGTAC...CAGCATGGCCACCACCACCGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp CGTGCAGCAGCCGGCGATCGCCAAGCTTCTCGAGTGTGCGCGCCGCCTCAGCCATCAAGGGCGGAAGCCTaGGGCCTGCTGCTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: RAAAGDRQASRVCAPPQPSRAEA*GLLLVP
Trigger: GGGCACCAGCAGCAGGCCCCAGGCTTCCGCCCTTGA...TGGCTGAGGCGGCGCGCACACTCGAGAAGCTTGGCGATCGCCGGCTGCTGCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCTCGGCCCCTGCAGTaGCCCGATCGGCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAAARPLQ*PDRPPE
Trigger: CTCTGGTGGCCGATCGGGGCACTGCAGGGGCCGAGC...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR TCA 90 bp AGTGGTCCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGACGCTGGTGGTATCTaGGGGGCTGGGAAGCCCCCG +
Preference number: 2 (lower is better)
Translates to: SGPTAQAHEHLLTVVQQPDAGGI*GAGKPP
Trigger: CGGGGGCTTCCCAGCCCCTCAGATACCACCAGCGTC...CGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGGACCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp CTGCTCAGGTCCCGTTGGAAGCCACGCAGCTCAAGGGCGGAAGCCTGGGGCCTGGCAGCCTTGAAGGAGTaGAGAGCTGCCCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LLRSRWKPRSSRAEAWGLAALKE*RAALGR
Trigger: CCTGCCCAGGGCAGCTCTGCACTCCTTCAAGGCTGC...CAGGCCCCAGGCTTCCGCCCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp AGTGGTCCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGGCCAGGGGGTCCACTaGGTTCCCGGCCAAGCTGTA +
Preference number: 2 (lower is better)
Translates to: SGPTAQAHEHLLTVVQQPGQGVH*VPGQAV
Trigger: TACAGCTTGGCCGGGAACCCAGTGGACCCCCTGGCC...CGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGGACCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR TCA 90 bp GCCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGCAGTGAGGTGCCCGCCTGTGAGACGCTGCAGCAGGTaGCGGATGAGGTTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: ARFRALSARLVAVRCPPVRRCSR*RMRFQR
Trigger: CCTCTGGAACCTCATCCGTCACCTGCTGCAGCGTCT...CACAGGCGGGCACCTCACTGCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCAGCTCGGCCCCTGCAGTaGCCCGATCGGCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSARPLQ*PDRPPE
Trigger: CTCTGGTGGCCGATCGGGGCACTGCAGGGGCCGAGC...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR CCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCTCCACGAAGAAACGGTaGCCCACGGGGTGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAASTKKR*PTGWQS
Trigger: GCTCTGCCACCCCGTGGGCCACCGTTTCTTCGTGGA...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CAA 90 bp GGTCCAGCATGCCCCGGCTGTGCAGAGACGGCCGCTGCTCTGGCTTaGCCTTACTGTGGGACCCCACGTGGCTCCAGGCCTCAGTTATTC +
Preference number: 2 (lower is better)
Translates to: GPACPGCAETAAALA*PYCGTPRGSRPQLF
Trigger: GAATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR TCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCGGGATGGGGGAGGTaGGACGTGCCAGACTTCTTG +
Preference number: 2 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRPGWGR*DVPDFL
Trigger: CAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGG...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR-3UTR GCA 90 bp AGAGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCAGAGGAAGACGAGCGTaGACAGGGCCAGGCGGGAGC +
Preference number: 2 (lower is better)
Translates to: RGLWGRALLAVRESQVGFRGRRA*TGPGGS
Trigger: GCTCCCGCCTGGCCCTGTGCACGCTCGTCTTCCTCT...GAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCATCTCTGCTCTCGGTaGCCAGCACGTTGCGCCCAG +
Preference number: 2 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRHLCSR*PARCAQ
Trigger: CTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGATG...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp CGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCACTGTGGGACCCCACGTaGCTCCAGGCCTCAGTTATT +
Preference number: 2 (lower is better)
Translates to: RAFHREGTQQPQVELWRPLWDPT*LQASVI
Trigger: AATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAG...TGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp CTGCTCAGGTCCCGTTGGAAGCCACGCAGCTCAAGGGCGGAAGCCTGGGGCCTGTGGCCTTCTCACAGATaGTCAGGCTGGCTGGACCAG +
Preference number: 2 (lower is better)
Translates to: LLRSRWKPRSSRAEAWGLWPSHR*SGWLDQ
Trigger: CTGGTCCAGCCAGCCTGACCATCTGTGAGAAGGCCA...CAGGCCCCAGGCTTCCGCCCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp TGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACCGGTGCCCAGCACGTTaGGCCCAGGGCTATGGTAGA +
Preference number: 2 (lower is better)
Translates to: WGRALLAVRESQVGFRQHRCPAR*AQGYGR
Trigger: TCTACCATAGCCCTGGGCGCAACGTGCTGGGCACCG...GTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp GACTCTCCCTGTCACTCAGGCTCACTGCGGCCTCCAACTCCTGGGCTCAAGCTGCTAGGTGTGAGCCACTaGGCCAGGCCTGTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: DSPCHSGSLRPPTPGLKLLGVSH*ARPVCP
Trigger: GGGACAGACAGGCCTGGCGCAGTGGCTCACACCTAG...CAGCTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCCTGAGTGACAGGGAGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR CAA 90 bp CTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTaGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LSPTTEREASGAEPC*QSGKAKLASVSTGK
Trigger: TTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR GCA 90 bp ACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGCATGCCCCGGCTGTaGAGAGACGGCCGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: TYTMYTSLSHDGERGLWGSMPRL*RDGRCS
Trigger: AGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCT...GCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCATCCCCTGCACACTCTaGCAGGTTCAGGGCACTCAG +
Preference number: 2 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRIPCTL*QVQGTQ
Trigger: CTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGAT...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp GCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCCCGCCGCCTCAGACTaGGGTCGAGGAGCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: AVRESQVGFRQHREMYPSPAASD*GRGAGV
Trigger: CACACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGG...AGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp AGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCCCTCACTGAGTCACGCACGTaGAGTCATGTATCCCACAAA +
Preference number: 2 (lower is better)
Translates to: SRLYLAHRYLAGAWRVPLTESRT*SHVSHK
Trigger: TTTGTGGGATACATGACTGCACGTGCGTGACTCAGT...GAGGGGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR-3UTR GCA 90 bp CTGAGACCTGCCGCCTTCACAGTGGCTCCGTCTGTCTTCATGGCTGTCAGAAGCGGTCGTTACAGGGGCTaGCGTGGGGGCAGCTGTGAC +
Preference number: 2 (lower is better)
Translates to: LRPAAFTVAPSVFMAVRSGRYRG*RGGSCD
Trigger: GTCACAGCTGCCCCCACGGCAGCCCCTGTAACGACC...GCTTCTGACAGCCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAGGTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR-3UTR CCA 90 bp CCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCTGCACGGGACCAAAGTaGCTAGAGACAGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: PPEVSTIMAAGLRVKIAPCTGPK*LETGVL
Trigger: CAGCACCCCTGTCTCTAGCCACTTTGGTCCCGTGCA...GGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR TCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGGCACCAACAGCCCATTaGGCAGCCAGACCACTGGGG +
Preference number: 2 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGAPTAH*AARPLG
Trigger: CCCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGC...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR TCA 90 bp CCACACACAAGCCACGGCACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGACAAAGTCCACAGACTaGGTCACGCACGTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: PHTSHGTSRLYLAHRYLATKSTD*VTHVQS
Trigger: TGACTGCACGTGCGTGACTCAGTCTGTGGACTTTGT...CGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTGCCGTGGCTTGTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR-3UTR GCA 90 bp AGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGAGCTCGGCCCCTGCAGTaGCCCGATCGGCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: SWLPSAQGNVPLSSLYTGARPLQ*PDRPPE
Trigger: CTCTGGTGGCCGATCGGGGCACTGCAGGGGCCGAGC...TCCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR GCA 90 bp TCAGTGCTCGCTCTAAGAGATGTTCCCGGAATAGCTGAGTCACCTGGGCCAGGGAAATGGCTCGGCCCCTaGAGTGCCCCGATCGGCCAC +
Preference number: 2 (lower is better)
Translates to: SVLALRDVPGIAESPGPGKWLGP*SAPIGH
Trigger: GTGGCCGATCGGGGCACTGCAGGGGCCGAGCCATTT...CCCTGGCCCAGGTGACTCAGCTATTCCGGGAACATCTCTTAGAGCGAGCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCACGTGCCAGACTTCTTaGAGGGAGACCCAAGCTGTA +
Preference number: 2 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAATCQTS*RETQAV
Trigger: TACAGCTTGGGTCTCCCTGCAAGAAGTCTGGCACGT...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR-3UTR GCA 90 bp GTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTGGCCACCGGGTCTACGCCCCAGGTCAGCCTGCTTaGGATGCCTCCAGAAGTACA +
Preference number: 2 (lower is better)
Translates to: VDHHSCQRGPPLGHRVYAPGQPA*DASRST
Trigger: TGTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGG...GGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp CATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCGCCAAGCTTCTCGAGAGGCCTGGCGGGCACTaGTCAGGAAGAAGCGTGTCA +
Preference number: 2 (lower is better)
Translates to: HEHLLTVVQQPAIAKLLERPGGH*SGRSVS
Trigger: TGACACGCTTCTTCCTGAGCAGTGCCCGCCAGGCCT...CTCGAGAAGCTTGGCGATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTCCTTTCCCTAGGTGCTaGGGGAGGGCCCAAGCACTC +
Preference number: 2 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCPFPRC*GRAQAL
Trigger: GAGTGCTTGGGCCCTCCCCCAGCACCTAGGGAAAGG...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000485080.6
ENST00000578469.1
3UTR-3UTR CCA 90 bp AGTGGTCCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGTATGGTAGACGCTGGTaGTATCTGAGGGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SGPTAQAHEHLLTVVQQPYGRRW*YLRGWE
Trigger: TTCCCAGCCCCTCAGATACCACCAGCGTCTACCATA...CGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGGACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCCCCTGGGCTTGGGGGTaGGGGTCGAAACAGTACTGG +
Preference number: 2 (lower is better)
Translates to: FGKSAARGFRPDSAGSRAPWAWG*GSKQYW
Trigger: CCAGTACTGTTTCGACCCCCACCCCCAAGCCCAGGG...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000485080.6
3UTR-3UTR CCA 90 bp AGTGGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGGCAAAGGCCCTAGGACCGGGACCTGCTaGATCTGCGAGGTCACAGTG +
Preference number: 2 (lower is better)
Translates to: SGTVAKMVPPLTRVGKGPRTGTC*ICEVTV
Trigger: CACTGTGACCTCGCAGATCCAGCAGGTCCCGGTCCT...AGGGCCTTTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CAA 90 bp GAGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTaGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTA +
Preference number: 2 (lower is better)
Translates to: EASGAEPCLQSGKAK*ASVSTGKCTPLFPV
Trigger: TACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR TCA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGGAGGCCCTAAGGGTTaGCACAGCCCAACCATGTGC +
Preference number: 2 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCGGPKG*HSPTMC
Trigger: GCACATGGTTGGGCTGTGTCAACCCTTAGGGCCTCC...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR-3UTR TCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCTTCTTTGCTGTGAGATaGCCAGGGGCCGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: FGKSAARGFRPDSAGSRAFFAVR*PGAGMG
Trigger: CCCCATCCCGGCCCCTGGTCATCTCACAGCAAAGAA...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261646.10
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
3UTR-3UTR GCA 90 bp AGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGAAAAAGCCACTAAGGTaGCTGCAGAGCAAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: RPLGQSPACSPGKPSWLPKKPLR*LQSKEG
Trigger: CCCCTCCTTGCTCTGCAGGCACCTTAGTGGCTTTTT...CGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR GCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCTCACACAGGAACAGCTaGACGGCCTTGTCAATGGAG +
Preference number: 2 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRSHRNS*TALSME
Trigger: CTCCATTGACAAGGCCGTGCAGCTGTTCCTGTGTGA...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp CAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGTCAGTCCCAGTCCATCCTCCCGTaGCACCCAGGGACCTTGTGG +
Preference number: 2 (lower is better)
Translates to: QGDPSCSSCHTTGPGSQSQSILP*HPGTLW
Trigger: CCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTG...GGACTGACTTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578469.1
3UTR-3UTR CCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCATGCACGGGACCAAAGTaGCTAGAGACAGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSCTGPK*LETGVL
Trigger: CAGCACCCCTGTCTCTAGCCACTTTGGTCCCGTGCA...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR CCA 90 bp ACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCGGCTTTGCCTTACTGTaGGACCCCACGTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: TYTMYTSLSHDGERGLWGGFALL*DPTWLQ
Trigger: CTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCC...GCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp ACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCAGACGGCCGCTGCTCTaGCTTTGCCTTACTGTGGGA +
Preference number: 2 (lower is better)
Translates to: TMYTSLSHDGERGLWGRARRPLL*LCLTVG
Trigger: TCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCT...GGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR TCA 90 bp TCAGTGCTCGCTCTAAGAGATGTTCCCGGAATAGCTGAGTCACCTGGGCCAGGGTCTCCCATGGGGTACTaGGCACGGACCAGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: SVLALRDVPGIAESPGPGSPMGY*ARTSPH
Trigger: ATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGA...CCCTGGCCCAGGTGACTCAGCTATTCCGGGAACATCTCTTAGAGCGAGCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR TCA 90 bp AGAACAGCTGTTCAGCAGCTGCAGGTACCCGAGGGCATCCGAGAATTCCTTGTCTGTTCCCGGAATAGCTaGGTCACCTGGGCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: RTAVQQLQVPEGIREFLVCSRNS*VTWARG
Trigger: CCCCCTGGCCCAGGTGACTCAGCTATTCCGGGAACA...GACAAGGAATTCTCGGATGCCCTCGGGTACCTGCAGCTGCTGAACAGCTGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGACGCAGGACAGAAGCTaGACGGGACCAAAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLTQDRS*TGPKWL
Trigger: TAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGT...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR-3UTR GCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCGGGAGGAGGCTTCTTTaGTGTGAGATGACCAGGGGC +
Preference number: 2 (lower is better)
Translates to: FGKSAARGFRPDSAGSRAGRRLL*CEMTRG
Trigger: GCCCCTGGTCATCTCACAGCAAAGAAGCCTCCTCCC...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261646.10
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
3UTR-3UTR GCA 90 bp CCAGTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTGGCCACCGGGTCTACAAGCGTGTCAGAAAATaGAAGGCCCGTGGGAGACTG +
Preference number: 2 (lower is better)
Translates to: PVDHHSCQRGPPLGHRVYKRVRK*KARGRL
Trigger: CAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTT...GTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp TGCGAGCCGGTTGATAGGCAGCTTCTCCGCATCTACGACCAGTGGGACTGTTGCGGGACCTGCTGGATCTaGGAGGTCACAGTGGTCGTT +
Preference number: 2 (lower is better)
Translates to: CEPVDRQLLRIYDQWDCCGTCWI*EVTVVV
Trigger: AACGACCACTGTGACCTCGCAGATCCAGCAGGTCCC...GCAACAGTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGGCTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CAA 90 bp GCATCCGAGAATTCCTTGTCCCCATCAGCTGACCCAGGGCTGGGGTaGGGCTGGGTCACACAGTTCAGTGCTCGCTCTAAGAGATGTTCC +
Preference number: 2 (lower is better)
Translates to: ASENSLSPSADPGLG*GWVTQFSARSKRCS
Trigger: GGAACATCTCTTAGAGCGAGCACTGAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATTCTCGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR GCA 90 bp TGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGAAGCCTTTCCCTAGGTaGTGGGGGAGGGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: CFGKSAARGFRPDSAGSRKPFPR*WGRAQA
Trigger: TGCTTGGGCCCTCCCCCAGCACCTAGGGAAAGGCTT...CCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000485080.6
ENST00000578469.1
3UTR-3UTR GCA 90 bp GCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTAGGTCCAGGTCAGCCTaGTTGCGATGCCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: AVRESQVGFRQHREMYPSRSRSA*LRCLQK
Trigger: CTTCTGGAGGCATCGCAAGCAGGCTGACCTGGACCT...AGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp GCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTTGCACGGGACCAAAGTaGCTAGAGACAGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: AVRESQVGFRQHREMYPSCTGPK*LETGVL
Trigger: CAGCACCCCTGTCTCTAGCCACTTTGGTCCCGTGCA...AGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR CCA 90 bp GCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCCGCAGGTCGAACTGTaGAGGCCAGAGTCTCTTGCA +
Preference number: 2 (lower is better)
Translates to: AVRESQVGFRQHREMYPSPQVEL*RPESLA
Trigger: TGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGG...AGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR CCA 90 bp AGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCCGCAGGTCGAACTGTaGAGGCCAGAGTCTCTTGCA +
Preference number: 2 (lower is better)
Translates to: STLTYTMYTSLSHDGERGPQVEL*RPESLA
Trigger: TGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGG...GCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR CCA 90 bp CACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTGGCTATGGTAGACGCTaGTGGTATCTGAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: HADLHYVHVSLPRRRERPGYGRR*WYLRGW
Trigger: CCAGCCCCTCAGATACCACCAGCGTCTACCATAGCC...AGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CCA 90 bp TTCACAGTGGCTCCGTCTGTCTTCATGGCTGTCAGAAGCAGCGAGTCTGCCTTGTCTGCGAGGTCACAGTaGTCGTTACAGGGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: FTVAPSVFMAVRSSESALSARSQ*SLQGLP
Trigger: CGGCAGCCCCTGTAACGACCACTGTGACCTCGCAGA...CAAGGCAGACTCGCTGCTTCTGACAGCCATGAAGACAGACGGAGCCACTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR-3UTR TCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGTTCTTTGCTGTGAGATaGCCAGGGGCCGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRFFAVR*PGAGMG
Trigger: CCCCATCCCGGCCCCTGGTCATCTCACAGCAAAGAA...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR-3UTR GCA 90 bp CTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCACGCAGGACAGAAGCTaGACGGGACCAAAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: LAVRESQVGFRQHREMYPTQDRS*TGPKWL
Trigger: TAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGT...GGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR GCA 90 bp TGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGGGAGGAGGCTTCTTTaGTGTGAGATGACCAGGGGC +
Preference number: 2 (lower is better)
Translates to: CFGKSAARGFRPDSAGSRGRRLL*CEMTRG
Trigger: GCCCCTGGTCATCTCACAGCAAAGAAGCCTCCTCCC...CCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261646.10
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
3UTR-3UTR CCA 90 bp CAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACACTATCCCAACCATGTGCCCTaGGAGCAGGGGGAACAGGTA +
Preference number: 2 (lower is better)
Translates to: QSSTGASGQEAKHADLHYPNHVP*EQGEQV
Trigger: TACCTGTTCCCCCTGCTCCCAGGGCACATGGTTGGG...ATAGTGTAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR-3UTR GCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGTCTCTTGCACTaGCTTCGGCCTTCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGQSLLH*LRPSKL
Trigger: AAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTG...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR GCA 90 bp CGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGAAGCCTTTCCCTAGGTaGTGGGGGAGGGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: RLFWKICSPWIPTRFSWEKPFPR*WGRAQA
Trigger: TGCTTGGGCCCTCCCCCAGCACCTAGGGAAAGGCTT...CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000485080.6
ENST00000578469.1
3UTR-3UTR CCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCTGTAGCTCCTTGTaGCCGGAGGGGGAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGSCSSL*PEGEGK
Trigger: CTTCCCCTCCCCCTCCGGCCACAAGGAGCTACAGCT...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000485080.6
3UTR-3UTR TCA 90 bp CACACACAAAGTCCACAGACTGAGTCACGCACGTGCAGTCATGTATCCCACAAACCTGTCTGTCCCGTCTaGCACACACACAGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: HTQSPQTESRTCSHVSHKPVCPV*HTHSLP
Trigger: AGGGAGGCTGTGTGTGTGTCAGACGGGACAGACAGG...TTTGTGGGATACATGACTGCACGTGCGTGACTCAGTCTGTGGACTTTGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR-3UTR GCA 90 bp CAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACACTATGAGGCCAGAGTCTCTTaGACTGCCTTCGGCCTTCAA +
Preference number: 2 (lower is better)
Translates to: QSSTGASGQEAKHADLHYEARVS*TAFGLQ
Trigger: TTGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTC...ATAGTGTAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR GCA 90 bp TGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGAAAAAGCCACTAAGGTaGCTGCAGAGCAAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: CFGKSAARGFRPDSAGSRKKPLR*LQSKEG
Trigger: CCCCTCCTTGCTCTGCAGGCACCTTAGTGGCTTTTT...CCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR-3UTR GCA 90 bp CGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGGGGAGGAGGCTTCTTTaGTGTGAGATGACCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RLFWKICSPWIPTRFSWEGRRLL*CEMTRG
Trigger: GCCCCTGGTCATCTCACAGCAAAGAAGCCTCCTCCC...CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261646.10
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
3UTR-3UTR CCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGAGGCCCGTGGGAGACTaGTCTTCACTCTCAATGCAG +
Preference number: 2 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRRPVGD*SSLSMQ
Trigger: CTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCT...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR TCA 90 bp CACACACAAAGTCCACAGACTGAGTCACGCACGTGCAGTCATGTATCCCACAAAAGCTGTCCTCCCAACTaGGCCTCCCAAAGTGCTAGG +
Preference number: 2 (lower is better)
Translates to: HTQSPQTESRTCSHVSHKSCPPN*ASQSAR
Trigger: CCTAGCACTTTGGGAGGCTCAGTTGGGAGGACAGCT...TTTGTGGGATACATGACTGCACGTGCGTGACTCAGTCTGTGGACTTTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR-3UTR GCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGCAGAGTCTCTTGCACTaGCTTCGGCCTTCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRQSLLH*LRPSKL
Trigger: AAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTG...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR GCA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACAGAGTCTCTTGCACTaGCTTCGGCCTTCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: KRQSSTGASGQEAKHADLQSLLH*LRPSKL
Trigger: AAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTG...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR GCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACAAATGGCTCGGCCCCTaGAGTGCCCCGATCGGCCAC +
Preference number: 2 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDKWLGP*SAPIGH
Trigger: GTGGCCGATCGGGGCACTGCAGGGGCCGAGCCATTT...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR-3UTR CCA 90 bp TGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCATTCTGTCTATGAAATaGGAGGTAGGATCTGTTAGG +
Preference number: 2 (lower is better)
Translates to: CSPGKPSWLPSAQGNVPLILSMK*EVGSVR
Trigger: CCTAACAGATCCTACCTCCCATTTCATAGACAGAAT...GAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp CAGCTCCGCCACCGCGCCTCCTTTGCCACCGGGGCCTaGCCGCCGCCTCAGACTGCGGTCGAGGAGCTGGTG +
Preference number: 3 (lower is better)
Translates to: QLRHRASFATGA*PPPQTAVEELV
Trigger: CACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGGCAGGCCCCGGTGGCAAAGGAGGCGCGGTGGCGGAGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp CGAGCGTGCACAGGGCCAGGCGGGAGCGGTCCAGCATaGCCCGGCTGTGCAGAGACGGCCGCTGCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: RACTGPGGSGPA*PGCAETAAALA
Trigger: AGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCCCGCCTGGCCCTGTGCACGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp CAAGCTTCTCGAGTGTGCGCGCCGCCTCAGCCAGCATaGCCACGCGCTGCCCGGGCGCCGACAGGAAGCCGG +
Preference number: 3 (lower is better)
Translates to: QASRVCAPPQPA*PRAARAPTGSR
Trigger: CCGGCTTCCTGTCGGCGCCCGGGCAGCGCGTGGGCATGCTGGCTGAGGCGGCGCGCACACTCGAGAAGCTTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 72 bp GCCTCAGACTGCGGTCGAGGAGCTGGTGTGTCCGTGTaGGGCTGGCCCCCGCCATCAGCCGGGCCGTGGCCT +
Preference number: 3 (lower is better)
Translates to: ASDCGRGAGVSV*GWPPPSAGPWP
Trigger: AGGCCACGGCCCGGCTGATGGCGGGGGCCAGCCCCACACGGACACACCAGCTCCTCGACCGCAGTCTGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp CGTGCAGCAGCCGGCGATCGCCAAGCTTCTCGAGTGTaGGCGCCGCCTCAGCCAGCATGCCCACGCGCTGCC +
Preference number: 3 (lower is better)
Translates to: RAAAGDRQASRV*APPQPACPRAA
Trigger: GGCAGCGCGTGGGCATGCTGGCTGAGGCGGCGCGCACACTCGAGAAGCTTGGCGATCGCCGGCTGCTGCACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 72 bp GACTGCGGTCGAGGAGCTGGTGTGTCCGTGTGGGGCTaGCCCCCGCCATCAGCCGGGCCGTGGCCTCATGTA +
Preference number: 3 (lower is better)
Translates to: DCGRGAGVSVWG*PPPSAGPWPHV
Trigger: TACATGAGGCCACGGCCCGGCTGATGGCGGGGGCCAGCCCCACACGGACACACCAGCTCCTCGACCGCAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 72 bp GAGCCCTGGGCTTGGGGGTGGGGGTCGAAACAGTACTaGAAGAGGCGGAGGGCGGCTCCTAGCTCCGTGGAC +
Preference number: 3 (lower is better)
Translates to: EPWAWGWGSKQY*KRRRAAPSSVD
Trigger: GTCCACGGAGCTAGGAGCCGCCCTCCGCCTCTTCCAGTACTGTTTCGACCCCCACCCCCAAGCCCAGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485080.6
3UTR-3UTR CAA 90 bp CTGTCCGTCCGTGTCCTCAGCTCTGTCCACGCTTCGATAGGCCTGACGCAGCCCCCAAGCTGTAGCTCCTaGTGGCCGGAGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: LSVRVLSSVHASIGLTQPPSCSS*WPEGEG
Trigger: CCCCTCCCCCTCCGGCCACAAGGAGCTACAGCTTGG...GGGCTGCGTCAGGCCTATCGAAGCGTGGACAGAGCTGAGGACACGGACGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485080.6
3UTR GCA 72 bp CAGCGTCGCCACAGACACGGCATCCCCTGCACACTCTaGCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: QRRHRHGIPCTL*QVQGTQRQVGG
Trigger: GCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCTGTGGCGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp GATCTCGGCCAGCGTCGCCACAGACACGGCATCCCCTaGACACTCTGCCAGGTTCAGGGCACTCAGCGCCAG +
Preference number: 3 (lower is better)
Translates to: DLGQRRHRHGIP*TLCQVQGTQRQ
Trigger: CTGGCGCTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCTGTGGCGACGCTGGCCGAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp CACACAACAGGTCCTGGAAGTCAGTCCATCCTCCCGTaGCACCCAGGGACCTTGTGGCCGGAGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: HTTGPGSQSILP*HPGTLWPEGEG
Trigger: CCCCTCCCCCTCCGGCCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGACCTGTTGTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578469.1
3UTR CCA 72 bp AGTGCCCCGATCGGCCACCAGAGGTCAGCACCATCATaGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCTCG +
Preference number: 3 (lower is better)
Translates to: SAPIGHQRSAPS*PPVLGSRSRPS
Trigger: CGAGGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCCGATCGGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR CCA 72 bp CAGCATGCCCCGGCTGTGCAGAGACGGCCGCTGCTCTaGCTTTGCCTTACTGTGGGACCCCACGTGGCTCCA +
Preference number: 3 (lower is better)
Translates to: QHAPAVQRRPLL*LCLTVGPHVAP
Trigger: TGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 72 bp AGCCGCTCAGCCGCCTCCTCATCCCGCCGCAGCCAGTaGATCACCACAGCTGTCAGAGAGGCCCACCACTTG +
Preference number: 3 (lower is better)
Translates to: SRSAASSSRRSQ*ITTAVREAHHL
Trigger: CAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACTGGCTGCGGCGGGATGAGGAGGCGGCTGAGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CAA 90 bp TCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTGGAGGCCAGAGTCTCTaGCACTGCCTTCGGCCTTCA +
Preference number: 3 (lower is better)
Translates to: SRSRPSGLPPRRHTAAAGGGQSL*HCLRPS
Trigger: TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCC...ACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR CAA 90 bp CTGCTCAGGTCCCGTTGGAAGCCACGCAGCTCAAGGGCGGAAGCCTGGGGCCTGGGAGGCCAGAGTCTCTaGCACTGCCTTCGGCCTTCA +
Preference number: 3 (lower is better)
Translates to: LLRSRWKPRSSRAEAWGLGGQSL*HCLRPS
Trigger: TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCC...CAGGCCCCAGGCTTCCGCCCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 72 bp CCGGGTCTACGCCGGTGGTGGTGGCCATGCTGGAACTaGTGGAGAAGCTGTAGGCAGGAGCCCCCGCAGCAT +
Preference number: 3 (lower is better)
Translates to: PGLRRWWWPCWN*WRSCRQEPPQH
Trigger: ATGCTGCGGGGGCTCCTGCCTACAGCTTCTCCATCAGTTCCAGCATGGCCACCACCACCGGCGTAGACCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 72 bp ACAGTGGTCCCACCGCCCAGGCGCATGAGCATCTGCTaGCAGTCGTGCAGCAGCCGGCGATCGCCAAGCTTC +
Preference number: 3 (lower is better)
Translates to: TVVPPPRRMSIC*QSCSSRRSPSF
Trigger: GAAGCTTGGCGATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGGACCACTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp CCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTaGTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTC +
Preference number: 3 (lower is better)
Translates to: PTTEREASGAEP*LQSGKAKLASV
Trigger: GACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR GCA 72 bp TTCAGGGCACTCAGCGCCAGGTTGGTGGCAGTGAGGTaGCCGCCTGTGTGCTTCCCCATGGTGTGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: FRALSARLVAVR*PPVCFPMVCSW
Trigger: CCAGCTGCACACCATGGGGAAGCACACAGGCGGGCACCTCACTGCCACCAACCTGGCGCTGAGTGCCCTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp AAGTGGGGCTGCAGCAGGACCGGGACCTGCTGGATCTaGGAGGTCACAGTGGTCGTTACAGGGGCTGCCGTG +
Preference number: 3 (lower is better)
Translates to: KWGCSRTGTCWI*EVTVVVTGAAV
Trigger: CACGGCAGCCCCTGTAACGACCACTGTGACCTCGCAGATCCAGCAGGTCCCGGTCCTGCTGCAGCCCCACTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CCA 72 bp AGTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTaGCCACCGGGTCTACGCCGGTGGTGGTGGCCATGC +
Preference number: 3 (lower is better)
Translates to: SGSPQLSERPTT*PPGLRRWWWPC
Trigger: GCATGGCCACCACCACCGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 72 bp GCCCTGTCTGCACAGTGGTGCCAGAGACCAGGGGACTaGGACCTGCCGCCTTCACAGTGGCTCCGTCTGTCT +
Preference number: 3 (lower is better)
Translates to: ALSAQWCQRPGD*DLPPSQWLRLS
Trigger: AGACAGACGGAGCCACTGTGAAGGCGGCAGGTCTCAGTCCCCTGGTCTCTGGCACCACTGTGCAGACAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR GCA 72 bp AGCCAGGGCCATCTCTGCTCTCGGTGCCCAGCACGTTaGGCCCAGGGCTATGGTAGACGCTGGTGGTATCTG +
Preference number: 3 (lower is better)
Translates to: SQGHLCSRCPAR*AQGYGRRWWYL
Trigger: CAGATACCACCAGCGTCTACCATAGCCCTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGATGGCCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp GTTCCGCCACTCACCAGGGTCGGCAAAGGCCCTGTCTaGACAGTGGTGCCAGAGACCAGGGGACTGAGACCT +
Preference number: 3 (lower is better)
Translates to: VPPLTRVGKGPV*TVVPETRGLRP
Trigger: AGGTCTCAGTCCCCTGGTCTCTGGCACCACTGTGCAGACAGGGCCTTTGCCGACCCTGGTGAGTGGCGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CCA 72 bp CACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTaGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTC +
Preference number: 3 (lower is better)
Translates to: HREGTQQPQVEL*RPESLALPSAF
Trigger: GAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR-3UTR CAA 90 bp CCAGCAAGGAGGCCAAGGGGTTGCAGGACAGGCAGAGGAAGACGAGCGTGCACAGCCGCTGCTCTGGCTTaGCCTTACTGTGGGACCCCA +
Preference number: 3 (lower is better)
Translates to: PARRPRGCRTGRGRRACTAAALA*PYCGTP
Trigger: TGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGC...TGTGCACGCTCGTCTTCCTCTGCCTGTCCTGCAACCCCTTGGCCTCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CAA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCTCCAGGTCAGCCTGCTaGCGATGCCTCCAGAAGTAC +
Preference number: 3 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRSRSAC*RCLQKY
Trigger: GTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGGA...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 72 bp AGAGAAGCACCAAGGAGACGAGCACCAACAGCCCATTaGGCAGCCAGACCACTGGGGGCAGCAGCCACTGGG +
Preference number: 3 (lower is better)
Translates to: REAPRRRAPTAH*AARPLGAAATG
Trigger: CCCAGTGGCTGCTGCCCCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGCTCGTCTCCTTGGTGCTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR TCA 72 bp CTGCTTGCGATGCCTCCAGAAGTACACGGCGGGGCCTaGGTGGGGCCGTGTGACTGGCTCACCGTAGACAAA +
Preference number: 3 (lower is better)
Translates to: LLAMPPEVHGGA*VGPCDWLTVDK
Trigger: TTTGTCTACGGTGAGCCAGTCACACGGCCCCACTCAGGCCCCGCCGTGTACTTCTGGAGGCATCGCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp CTGAGCCACTCTGTGCCAGGCAGGCCTGGCGGGCACTaGTCAGGAAGAAGCGTGTCAGAAAATGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: LSHSVPGRPGGH*SGRSVSENARP
Trigger: GGGCCTTGCATTTTCTGACACGCTTCTTCCTGAGCAGTGCCCGCCAGGCCTGCCTGGCACAGAGTGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp CTGCACAGTGGTGCCAGAGACCAGGGGACTGAGACCTaGCGCCTTCACAGTGGCTCCGTCTGTCTTCATGGC +
Preference number: 3 (lower is better)
Translates to: LHSGARDQGTET*RLHSGSVCLHG
Trigger: GCCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAGGTCTCAGTCCCCTGGTCTCTGGCACCACTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CCA 72 bp CACTGGGTTCCCGGCCAAGCTGTACAGGCTCTCCCATaGGGTACTGAGCACGGACCAGTCCCCATCCACGAA +
Preference number: 3 (lower is better)
Translates to: HWVPGQAVQALP*GTEHGPVPIHE
Trigger: TTCGTGGATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTACAGCTTGGCCGGGAACCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CAA 90 bp CGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGTGCCACCCAGGGACCTaGTGGCCGGAGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: RLFWKICSPWIPTRFSWECHPGT*WPEGEG
Trigger: CCCCTCCCCCTCCGGCCACAAGGTCCCTGGGTGGCA...CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578469.1
3UTR TCA 72 bp TCCCGGCCAAGCTGTACAGGCTCTCCCATGGGGTACTaGGCACGGACCAGTCCCCATCCACGAAGAAACGGT +
Preference number: 3 (lower is better)
Translates to: SRPSCTGSPMGY*ARTSPHPRRNG
Trigger: ACCGTTTCTTCGTGGATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTACAGCTTGGCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp GCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTaGACTGCCTTCGGCCTTCAAAGCTTCGACGCAGGA +
Preference number: 3 (lower is better)
Translates to: AAAGRTVEARVS*TAFGLQSFDAG
Trigger: TCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR GCA 72 bp ATGCAAGGCCCGTGGGAGACTGGTCTTCACTCTCAATaGAGCCGCCACATAGATCTCGGCCAGCGTCGCCAC +
Preference number: 3 (lower is better)
Translates to: MQGPWETGLHSQ*SRHIDLGQRRH
Trigger: GTGGCGACGCTGGCCGAGATCTATGTGGCGGCTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCTTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR GCA 72 bp GGAGCCCCCGCAGCATCAGAACAGCTGTTCAGCAGCTaGAGGTACCCGAGGGCATCCGAGAATTCCTTGTCC +
Preference number: 3 (lower is better)
Translates to: GAPAASEQLFSS*RYPRASENSLS
Trigger: GGACAAGGAATTCTCGGATGCCCTCGGGTACCTGCAGCTGCTGAACAGCTGTTCTGATGCTGCGGGGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 72 bp CCGAGAATTCCTTGTCCCCATCAGCTGACCCAGGGCTaGGGTTGGGCTGGGTCACACAGTTCAGTGCTCGCT +
Preference number: 3 (lower is better)
Translates to: PRIPCPHQLTQG*GWAGSHSSVLA
Trigger: AGCGAGCACTGAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 72 bp GAACAGCTGCACGGCCTTGTCAATGGAGCTGCTGGCTaGTGTGGTAGCCAGGCTGTCCTGCAGGTACCCACT +
Preference number: 3 (lower is better)
Translates to: EQLHGLVNGAAG*CGSQAVLQVPT
Trigger: AGTGGGTACCTGCAGGACAGCCTGGCTACCACACCAGCCAGCAGCTCCATTGACAAGGCCGTGCAGCTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 72 bp TCCCTGTCACTCAGGCTCACTGCGGCCTCCAACTCCTaGGCTCAAGCTGTCCTCCCAACTGAGCCTCCCAAA +
Preference number: 3 (lower is better)
Translates to: SLSLRLTAASNS*AQAVLPTEPPK
Trigger: TTTGGGAGGCTCAGTTGGGAGGACAGCTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCCTGAGTGACAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR CCA 72 bp ATGGCTGTCAGAAGCAGCGAGTCTGCCTTGATGAAGTaGGGCTGCAGCAGGACCGGGACCTGCTGGATCTGC +
Preference number: 3 (lower is better)
Translates to: MAVRSSESALMK*GCSRTGTCWIC
Trigger: GCAGATCCAGCAGGTCCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGACAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CCA 72 bp TCTCCGCATCTACGACCAGTGGGACTGTTGCCAAGATaGTTCCGCCACTCACCAGGGTCGGCAAAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: SPHLRPVGLLPR*FRHSPGSAKAL
Trigger: CAGGGCCTTTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR GCA 72 bp CCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTaGACGGGACCAAAGTGGCTAGAGACAGGGGTGCTG +
Preference number: 3 (lower is better)
Translates to: PSAFKASTQDRS*TGPKWLETGVL
Trigger: CAGCACCCCTGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR GCA 72 bp AGGCAGCTTCTCCGCATCTACGACCAGTGGGACTGTTaGCAAGATGGTTCCGCCACTCACCAGGGTCGGCAA +
Preference number: 3 (lower is better)
Translates to: RQLLRIYDQWDC*QDGSATHQGRQ
Trigger: TTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCGGAGAAGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR CCA 72 bp GGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTaGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: GQSPACSPGKPS*LPSAQGNVPLS
Trigger: AGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR GCA 72 bp CGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTaGCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAA +
Preference number: 3 (lower is better)
Translates to: RRSNCGGQSLLH*LRPSKLRRRTE
Trigger: TTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR CCA 72 bp AAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTaGGAGCCGGGCCAGGCTTTAGGTTGGGGAATGGGA +
Preference number: 3 (lower is better)
Translates to: KICSPWIPTRFS*EPGQALGWGMG
Trigger: TCCCATTCCCCAACCTAAAGCCTGGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261646.10
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
3UTR CCA 72 bp TTGTCCCCATCAGCTGACCCAGGGCTGGGGTTGGGCTaGGTCACACAGTTCAGTGCTCGCTCTAAGAGATGT +
Preference number: 3 (lower is better)
Translates to: LSPSADPGLGLG*VTQFSARSKRC
Trigger: ACATCTCTTAGAGCGAGCACTGAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTGATGGGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CCA 72 bp CCGGTTGATAGGCAGCTTCTCCGCATCTACGACCAGTaGGACTGTTGCCAAGATGGTTCCGCCACTCACCAG +
Preference number: 3 (lower is better)
Translates to: PVDRQLLRIYDQ*DCCQDGSATHQ
Trigger: CTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
3UTR-3UTR CAA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGTCCGGGAAAGCCAAGTaGGCTTCCGTCAGCACAGGG +
Preference number: 3 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRSGKAK*ASVSTG
Trigger: CCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR CCA 72 bp GCTCAGGAAGAAGCGTGTCAGAAAATGCAAGGCCCGTaGGAGACTGGTCTTCACTCTCAATGCAGCCGCCAC +
Preference number: 3 (lower is better)
Translates to: AQEEACQKMQGP*ETGLHSQCSRH
Trigger: GTGGCGGCTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTTCTTCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CAA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGTCCGGGAAAGCCAAGTaGGCTTCCGTCAGCACAGGG +
Preference number: 3 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTSGKAK*ASVSTG
Trigger: CCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
3UTR TCA 72 bp CACCCTAGTCTCAGCCCACACACAAAGTCCACAGACTaGGTCACGCACGTGCAGTCATGTATCCCACAAATG +
Preference number: 3 (lower is better)
Translates to: HPSLSPHTKSTD*VTHVQSCIPQM
Trigger: CATTTGTGGGATACATGACTGCACGTGCGTGACTCAGTCTGTGGACTTTGTGTGTGGGCTGAGACTAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR CCA 72 bp AGAAGCGTGTCAGAAAATGCAAGGCCCGTGGGAGACTaGTCTTCACTCTCAATGCAGCCGCCACATAGATCT +
Preference number: 3 (lower is better)
Translates to: RSVSENARPVGD*SSLSMQPPHRS
Trigger: AGATCTATGTGGCGGCTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR-3UTR CAA 90 bp AAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCGGAGGCCAGAGTCTCTaGCACTGCCTTCGGCCTTCA +
Preference number: 3 (lower is better)
Translates to: KIQRLFWKICSPWIPTRFGGQSL*HCLRPS
Trigger: TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCC...GAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261646.10
3UTR GCA 72 bp AAGTCAATAAAGATACAACGATTGTTTTGGAAAATCTaGAGCCCGTGGATTCCGACCAGATTCAGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: KSIKIQRLFWKI*SPWIPTRFSWE
Trigger: CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261646.10
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
3UTR TCA 72 bp TATCCCACAAATGACAGTCACCCCACTGATTCCTTGTaGAAGGAATTGTCATCAGGTAACCATCAAGAAGAT +
Preference number: 3 (lower is better)
Translates to: YPTNDSHPTDSL*KELSSGNHQED
Trigger: ATCTTCTTGATGGTTACCTGATGACAATTCCTTTCACAAGGAATCAGTGGGGTGACTGTCATTTGTGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp GCCACCACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCGGAAGCCTGGGGCCTaGTGCTGGTGCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ATTGPGQSLPVRPPVRPCRKPGA*CWCPGL
Trigger: CAGCCCAGGGCACCAGCAGCAGGCCCCAGGCTTCCG...ACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTGGTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp AGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCCCTCGTGTCCGTGTGGGGCTaGCCCCCGCCATCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SRLYLAHRYLAGAWRVPLVSVWG*PPPSAG
Trigger: CCCGGCTGATGGCGGGGGCCAGCCCCACACGGACAC...GAGGGGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp CACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAGTCGTGGCGTGCAGCTaGGAGCCCTGGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: HRPGPVPASPSACPSVSSVVACS*EPWAWG
Trigger: CCCCCAAGCCCAGGGCTCCCAGCTGCACGCCACGAC...TGAGGACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR GCA 90 bp CACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCTTTGCCACCGGGGCCTaGCCGCCGCCTCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: HQPPVPGTQVPGGGLAGSFATGA*PPPQTA
Trigger: CGCAGTCTGAGGCGGCGGGCAGGCCCCGGTGGCAAA...GGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp CACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAGGAACACCCTCCGCATaGCGGGCCGGAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HRPGPVPASPSACPSVSSGTPSA*RAGSSV
Trigger: CACAGAGCTTCCGGCCCGCCATGCGGAGGGTGTTCC...TGAGGACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp CACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCGCTGGTGTGTCCGTGTaGGGCTGGCCCCCGCCATCA +
Preference number: 4 (lower is better)
Translates to: HQPPVPGTQVPGGGLAGSAGVSV*GWPPPS
Trigger: TGATGGCGGGGGCCAGCCCCACACGGACACACCAGC...GGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp ATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACATCTGCGCCCGCCCTTaGGGCGTCCAGGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: IAPLGPSTAKAHSSRRSNICARP*GVQAVG
Trigger: GCCAACGGCCTGGACGCCCCAAGGGCGGGCGCAGAT...GTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCCCTCTCCTGGCACACAGGTACCTaGCGGGGGCCTGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: RLYLAHRYLAGAWRVPLSWHTGT*RGPGGF
Trigger: GAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCA...GGAGAGGGGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR TCA 90 bp GCCACCACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTTTCTTTGCTGTGAGATaGCCAGGGGCCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: ATTGPGQSLPVRPPVRPCFFAVR*PGAGMG
Trigger: CCCCATCCCGGCCCCTGGTCATCTCACAGCAAAGAA...ACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTGGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR GCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCGGCTCGCCCAGCGCCTaGTCCAAAGCCGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPGSPSA*SKAASL
Trigger: CAGCGAGGCGGCTTTGGAGCAGGCGCTGGGCGAGCC...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp ATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACGGGAGCGGTCCAGCATaGCCCGGCTGTGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: IAPLGPSTAKAHSSRRSNGSGPA*PGCAET
Trigger: CGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCCC...GTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCCCTCTGGAACACCCTCCGCATaGCGGGCCGGAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AACTWHTGTWRGPGGFPSGTPSA*RAGSSV
Trigger: CACAGAGCTTCCGGCCCGCCATGCGGAGGGTGTTCC...AGAGGGGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp CGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCCCTCTCCCTGCGGTCGAGGAGCTaGTGTGTCCGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLYLAHRYLAGAWRVPLSLRSRS*CVRVGL
Trigger: CAGCCCCACACGGACACACCAGCTCCTCGACCGCAG...GGAGAGGGGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp GCCACCACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCGACCAGATTCAGCTaGGAGCCGGGCCAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: ATTGPGQSLPVRPPVRPCPTRFS*EPGQAL
Trigger: TAAAGCCTGGCCCGGCTCCCAGCTGAATCTGGTCGG...ACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTGGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp CACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAAGCTGTAGCTCCTTGTaGCCGGAGGGGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HRPGPVPASPSACPSVSSSCSSL*PEGEGK
Trigger: CTTCCCCTCCCCCTCCGGCCACAAGGAGCTACAGCT...TGAGGACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR TCA 90 bp CTGCTCAGGTCCCGTTGGAAGCCACGCAGCTCAAGGGCGGAAGCCTGGGGCCTGGACGCTGGTGGTATCTaGGGGGCTGGGAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LLRSRWKPRSSRAEAWGLDAGGI*GAGKPP
Trigger: CGGGGGCTTCCCAGCCCCTCAGATACCACCAGCGTC...CAGGCCCCAGGCTTCCGCCCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCCGCGCGTTCGTGTCCTaGCCTGGCCTCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAARAFVS*PGLRGG
Trigger: GCCGCCTCTGAGGCCAGGGCAGGACACGAACGCGCG...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGAGCACCCGGGGCAGGTaGTCCACCAGCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: AFHREGTQQPQVELWRPESTRGR*STSGHS
Trigger: GCTGTGCCCGCTGGTGGAGCACCTGCCCCGGGTGCT...CTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTGGCGGGGAAGCCAGTaGCAGGCCAGGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AFHREGTQQPQVELWRPEWRGSQ*QARQRL
Trigger: CAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCA...CTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp GTCTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGACGGGCGGGACCCCTaGCGGGGAAGCCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLGSRSRPSGLPPRRHTADGRDP*RGSQWQ
Trigger: CTGCCACTGGCTTCCCCGCCAGGGGTCCCGCCCGTC...TGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp GCCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGCAGTGAGGTGCCCGCCTGTGTCAAGGGCGGAAGCCTaGGGCCTGCTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ARFRALSARLVAVRCPPVSRAEA*GLLLVP
Trigger: GGGCACCAGCAGCAGGCCCCAGGCTTCCGCCCTTGA...CACAGGCGGGCACCTCACTGCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp GGCACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCATCAGCCGGGCCGTaGCCTCATGTAGGAACACCC +
Preference number: 4 (lower is better)
Translates to: GTSRLYLAHRYLAGAWRVPSAGP*PHVGTP
Trigger: GGGTGTTCCTACATGAGGCCACGGCCCGGCTGATGG...AACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp CCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCGTGTCCGTGTGGGGCTaGCCCCCGCCATCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPEVSTIMAAGLRVKIAPVSVWG*PPPSAG
Trigger: CCCGGCTGATGGCGGGGGCCAGCCCCACACGGACAC...GGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
3UTR CAA 72 bp GCTCTGTGCCAGCCGCCTCAGGCTGCTCAGGTCCCGTaGGAAGCCACGCAGCTCAAGGGCGGAAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALCQPPQAAQVP*EATQLKGGSLG
Trigger: CCCCAGGCTTCCGCCCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAGCCTGAGGCGGCTGGCACAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp TCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCGTACACGGCGGGGCCTaGGTGGGGCCGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: STAKAHSSRRSNCGGQSLVHGGA*VGPCDW
Trigger: CCAGTCACACGGCCCCACTCAGGCCCCGCCGTGTAC...GAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCGGGCCCGGGCAGCCTTaGAGGAGTGCAGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPGPGQP*RSAELP
Trigger: GGGCAGCTCTGCACTCCTTCAAGGCTGCCCGGGCCC...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAAGGGCCCGGGCAGCCTTaGAGGAGTGCAGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQGPGQP*RSAELP
Trigger: GGGCAGCTCTGCACTCCTTCAAGGCTGCCCGGGCCC...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp CAGTGGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGGCAAAGGCCCCACTCTGGACAGGGGTaGGGGCGCTGCCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QWDCCQDGSATHQGRQRPHSGQG*GRCLRP
Trigger: GGGCCGCAGGCAGCGCCCTCACCCCTGTCCAGAGTG...GGGCCTTTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp TCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTAGCATGCCCCGGCTGTaGAGAGACGGCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SRSRPSGLPPRRHTAAAGSMPRL*RDGRCS
Trigger: AGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCT...ACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CGTGCAGCAGCCGGCGATCGCCAAGCTTCTCGAGTGTGCGCGCCGCCTCAGCCACATCTCTGCTCTCGGTaGCCAGCACGTTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: RAAAGDRQASRVCAPPQPHLCSR*PARCAQ
Trigger: CTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGATG...TGGCTGAGGCGGCGCGCACACTCGAGAAGCTTGGCGATCGCCGGCTGCTGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp CGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAATGGTAGACCAGGGCTaGGTCTCGGGCGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: RAFHREGTQQPQVELWRPMVDQG*VSGAGA
Trigger: AGCGCCAGCGCCCGAGACGCAGCCCTGGTCTACCAT...TGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCTTTGCCACCGGGGCCTaGCCGCCGCCTCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRFATGA*PPPQTA
Trigger: CGCAGTCTGAGGCGGCGGGCAGGCCCCGGTGGCAAA...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GTCTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCATTTGCCACCGGGGCCTaGCCGCCGCCTCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: VLGSRSRPSGLPPRRHTAFATGA*PPPQTA
Trigger: CGCAGTCTGAGGCGGCGGGCAGGCCCCGGTGGCAAA...TGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAAATGGCTCGGCCCCTaGAGTGCCCCGATCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SGLPPRRHTAAAGRTVEAKWLGP*SAPIGH
Trigger: GTGGCCGATCGGGGCACTGCAGGGGCCGAGCCATTT...GGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCCATGGCTCCGCGATCTaGGCCCGCCCTTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPHGSAI*ARPWGV
Trigger: GACGCCCCAAGGGCGGGCGCAGATCGCGGAGCCATG...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCCAGGCAGCGGCTGCTaGGTGTTCCCGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LRVKIAPLGPSTAKAHSSPGSGC*VFPGGL
Trigger: AAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGG...GCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp GCCGGTCTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACTGTGCCAGGCAGGCCTaGCGGGCACTGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGLRVKIAPLGPSTAKAHCARQA*RALLRK
Trigger: CTTCCTGAGCAGTGCCCGCCAGGCCTGCCTGGCACA...GTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAGACCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCTGTGCCAGGCAGGCCTaGCGGGCACTGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPCARQA*RALLRK
Trigger: CTTCCTGAGCAGTGCCCGCCAGGCCTGCCTGGCACA...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCACAGCTGACCCAGGGCTaGGGTTGGGCTGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: RAFHREGTQQPQVELWRPQLTQG*GWAGSH
Trigger: GTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTG...TGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCCCGGGTCTACGCCGGTaGTGGTGGCCATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SGLPPRRHTAAAGRTVEAPGLRR*WWPCWN
Trigger: GTTCCAGCATGGCCACCACCACCGGCGTAGACCCGG...GGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCCCTCTGATGGTCAGGCTGGCTaGACCAGACTCTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AACTWHTGTWRGPGGFPSDGQAG*TRLCLG
Trigger: GCCAAGGCAGAGTCTGGTCCAGCCAGCCTGACCATC...AGAGGGGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp GCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCAAGGGCGGAAGCCTaGGGCCTGCTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AFHREGTQQPQVELWRPESRAEA*GLLLVP
Trigger: GGGCACCAGCAGCAGGCCCCAGGCTTCCGCCCTTGA...CTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AGCCACAGCTGCTGGGCAGCCTGGGCAAAGTCTCCCCGGGCCAGGTCCAGGTCAGGAACACCCTCCGCATaGCGGGCCGGAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SHSCWAAWAKSPRARSRSGTPSA*RAGSSV
Trigger: CACAGAGCTTCCGGCCCGCCATGCGGAGGGTGTTCC...TGACCTGGACCTGGCCCGGGGAGACTTTGCCCAGGCTGCCCAGCAGCTGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCTGGTGTGTCCGTGTaGGGCTGGCCCCCGCCATCA +
Preference number: 4 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAAAGVSV*GWPPPS
Trigger: TGATGGCGGGGGCCAGCCCCACACGGACACACCAGC...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp CCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCTGTTCCCGGAATAGCTaGGTCACCTGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTAQAHEHLLTVVQQPAICSRNS*VTWARG
Trigger: CCCCCTGGCCCAGGTGACTCAGCTATTCCGGGAACA...GATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp AGAGAGGCCCACCACTTGGCCACCGGGTCTACGCCGGTGGTGGTGGCCATGCTGCACCGCCCAGGCGCATaGGCATCTGCTGACAGTCGT +
Preference number: 4 (lower is better)
Translates to: REAHHLATGSTPVVVAMLHRPGA*ASADSR
Trigger: ACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTG...CAGCATGGCCACCACCACCGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp AGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCCCTCAGCTGTCCTCCCAACTaGGCCTCCCAAAGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: SRLYLAHRYLAGAWRVPLSCPPN*ASQSAR
Trigger: CCTAGCACTTTGGGAGGCTCAGTTGGGAGGACAGCT...GAGGGGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGGTCGTTACAGGGGCTaGCGTGGGGGCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAAGRYRG*RGGSCD
Trigger: GTCACAGCTGCCCCCACGGCAGCCCCTGTAACGACC...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCGGCCTTGCTGCCAGCTaGGAGCCGGTTGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPGLAAS*EPVDRQ
Trigger: CTGCCTATCAACCGGCTCGCAGCTGGCAGCAAGGCC...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CAGTGGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGGCAAAGGCCCCAGAGGCCGGGGCCTTaGTGCCAGCTGCGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: QWDCCQDGSATHQGRQRPQRPGP*CQLRAG
Trigger: ACCGGCTCGCAGCTGGCAGCAAGGCCCCGGCCTCTG...GGGCCTTTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGGTCTCTCAGACTCCTaGAGCACCCGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAAGLSDS*STRGRC
Trigger: GCACCTGCCCCGGGTGCTGCAGGAGTCTGAGAGACC...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGAGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGGAAGCCTGGGGCCTaGTGCTGGTGCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGLWGRALLAVRESQVGFRKPGA*CWCPGL
Trigger: CAGCCCAGGGCACCAGCAGCAGGCCCCAGGCTTCCG...GAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAAGGGCCGGAAGCTCTGTaGCAGCCGCCTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQGPEAL*QPPQAA
Trigger: AGCAGCCTGAGGCGGCTGGCACAGAGCTTCCGGCCC...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR GCA 90 bp ACAGGTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGGACCTTGTGGCCGCCCGCCGCCTCAGACTaGGGTCGAGGAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TGPGSQSILPCHPGTLWPPAASD*GRGAGV
Trigger: CACACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGG...CGGCCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGACCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR GCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTAGCATGCCCACGCGCTaGCCGGGCGCCGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLSMPTR*PGADRK
Trigger: CTTCCTGTCGGCGCCCGGGCAGCGCGTGGGCATGCT...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp ATCCCCTGCACACTCTGCCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGCAGTGCTCGGCCCCTGCAGTaGCCCGATCGGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: IPCTLCQVQGTQRQVGGSARPLQ*PDRPPE
Trigger: CTCTGGTGGCCGATCGGGGCACTGCAGGGGCCGAGC...ACTGCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp GCCGGTCTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACTCTGGGGCAGAGCCCTaGTTGCAGTCCGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: AGLRVKIAPLGPSTAKAHSGAEP*LQSGKA
Trigger: GGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGA...GTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAGACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCTCTGGGGCAGAGCCCTaGTTGCAGTCCGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PTAQAHEHLLTVVQQPAISGAEP*LQSGKA
Trigger: GGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGA...GATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp GCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGGGAGCTGAACTGCGGTaGGGCTGGGGCTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: AFHREGTQQPQVELWRPEGAELR*GWGWEA
Trigger: AGCTTCCCAGCCCCAGCCCCACCGCAGTTCAGCTCC...CTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp AGCCACAGCTGCTGGGCAGCCTGGGCAAAGTCTCCCCGGGCCAGGTCCAGGTCAGCTGCCGCCACAGGCTaGTGCGCACCACAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SHSCWAAWAKSPRARSRSAAATG*CAPQEA
Trigger: TGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGCAGC...TGACCTGGACCTGGCCCGGGGAGACTTTGCCCAGGCTGCCCAGCAGCTGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp TCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCGGAGAGAGAGGCCTCTaGGGCAGAGCCCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SGLPPRRHTAAAGRTVEAGERGL*GRALLA
Trigger: TGCAAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCC...GGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CTGCTCAGGTCCCGTTGGAAGCCACGCAGCTCAAGGGCGGAAGCCTGGGGCCTGGGAGAGAGAGGCCTCTaGGGCAGAGCCCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLRSRWKPRSSRAEAWGLGERGL*GRALLA
Trigger: TGCAAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCC...CAGGCCCCAGGCTTCCGCCCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAACCAAAGCCGCCTCGCTaGAGGGTGGCTCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQPKPPR*RVARPW
Trigger: CCATGGACGAGCCACCCTTCAGCGAGGCGGCTTTGG...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGGTACACGGCGGGGCCTaGGTGGGGCCGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLVHGGA*VGPCDW
Trigger: CCAGTCACACGGCCCCACTCAGGCCCCGCCGTGTAC...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp GTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTGGCCACCGGGTCTACGCCCCAGGTTGGTGGCAGTaGGGTGCCCGCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VDHHSCQRGPPLGHRVYAPGWWQ*GARLCA
Trigger: AGCACACAGGCGGGCACCTCACTGCCACCAACCTGG...GGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp CCACGGCACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGACAAAGTCCACAGACTaGGTCACGCACGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PRHQPPVPGTQVPGGGLATKSTD*VTHVQS
Trigger: TGACTGCACGTGCGTGACTCAGTCTGTGGACTTTGT...CGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTGCCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp ACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCGGCTCGCCCAGCGCCTaGTCCAAAGCCGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TMYTSLSHDGERGLWGRAGSPSA*SKAASL
Trigger: CAGCGAGGCGGCTTTGGAGCAGGCGCTGGGCGAGCC...GGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCAGCCAGGGCCATCTCTaGTCTCGGTGCCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAASQGHL*SRCPAR
Trigger: ACGTGCTGGGCACCGAGAGCAGAGATGGCCCTGGCT...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp ATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACAGACACGGCATCCCCTaGACACTCTGCCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: IAPLGPSTAKAHSSRRSNRHGIP*TLCQVQ
Trigger: CTGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCT...GTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAAGGCCTGGCGGGCACTaGTCAGGAAGAAGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: RAFHREGTQQPQVELWRPRPGGH*SGRSVS
Trigger: TGACACGCTTCTTCCTGAGCAGTGCCCGCCAGGCCT...TGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TCTCGGCCAGCGTCGCCACAGACACGGCATCCCCTGCACACTCTGCCAGGTTCAGGTCTCTCAGACTCCTaGAGCACCCGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRPASPQTRHPLHTLPGSGLSDS*STRGRC
Trigger: GCACCTGCCCCGGGTGCTGCAGGAGTCTGAGAGACC...TGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCTGTGGCGACGCTGGCCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp CCACACACAAGCCACGGCACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGCCGCCACAGGCTGGTaGGCACCACAAGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PHTSHGTSRLYLAHRYLAAATGW*APQEAG
Trigger: ACCTGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGC...CGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTGCCGTGGCTTGTGTGTGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCACGGAAGCCTGGGGCCTaGTGCTGGTGCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSRKPGA*CWCPGL
Trigger: CAGCCCAGGGCACCAGCAGCAGGCCCCAGGCTTCCG...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTCCCGCCGCCTCAGACTaGGGTCGAGGAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLPAASD*GRGAGV
Trigger: CACACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGG...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GACTCTCCCTGTCACTCAGGCTCACTGCGGCCTCCAACTCCTGGGCTCAAGCTGCCCGCCGCCTCAGACTaGGGTCGAGGAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: DSPCHSGSLRPPTPGLKLPAASD*GRGAGV
Trigger: CACACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGG...CAGCTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCCTGAGTGACAGGGAGAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAAGCCTTTCCCTAGGTaGTGGGGGAGGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPKPFPR*WGRAQA
Trigger: TGCTTGGGCCCTCCCCCAGCACCTAGGGAAAGGCTT...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR GCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAAATCCATCAGCTCCTTTaGCACCGGGGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQIHQLL*HRGLPA
Trigger: GGCGGGCAGGCCCCGGTGGCAAAGGAGCTGATGGAT...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp AGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGGAACTGCGGTGGGGCTaGGGCTGGGAAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPLGQSPACSPGKPSWLPELRWG*GWEALW
Trigger: CCACAGAGCTTCCCAGCCCCAGCCCCACCGCAGTTC...CGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp TCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTTCTGCGAGGTCACAGTaGTCGTTACAGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SRSRPSGLPPRRHTAAAGSARSQ*SLQGLP
Trigger: CGGCAGCCCCTGTAACGACCACTGTGACCTCGCAGA...ACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp TCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTAGGACCGGGACCTGCTaGATCTGCGAGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: SRSRPSGLPPRRHTAAAGRTGTC*ICEVTV
Trigger: CACTGTGACCTCGCAGATCCAGCAGGTCCCGGTCCT...ACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCTTCTCTCCACGGCTCTaGGCAGAGGCCGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPFSPRL*AEAGAL
Trigger: CAAGGCCCCGGCCTCTGCCCAGAGCCGTGGAGAGAA...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAGACGGCCGCTGCTCTaGCTTTGCCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPRRPLL*LCLAVL
Trigger: GAGGACAGCAAGGCAAAGCCAGAGCAGCGGCCGTCT...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTAGCTGCTGGGCAGCCTaGGCAAAGTCTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: FHREGTQQPQVELWRPESSCWAA*AKSPRA
Trigger: GGCCCGGGGAGACTTTGCCCAGGCTGCCCAGCAGCT...AGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CCACACACAAGCCACGGCACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGCTGCCGCCACAGGCTaGTGCGCACCACAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PHTSHGTSRLYLAHRYLAAAATG*CAPQEA
Trigger: TGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGCAGC...CGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTGCCGTGGCTTGTGTGTGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp AGCCACAGCTGCTGGGCAGCCTGGGCAAAGTCTCCCCGGGCCAGGTCCAGGTCACTGCTCAGGTCCCGTTaGAAGCCACGCAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SHSCWAAWAKSPRARSRSLLRSR*KPRSSR
Trigger: CCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG...TGACCTGGACCTGGCCCGGGGAGACTTTGCCCAGGCTGCCCAGCAGCTGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp AGAAGCACCAAGGAGACGAGCACCAACAGCCCATTGAGCAGCCAGACCACTGGGGTGTCCGTGTGGGGCTaGCCCCCGCCATCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: RSTKETSTNSPLSSQTTGVSVWG*PPPSAG
Trigger: CCCGGCTGATGGCGGGGGCCAGCCCCACACGGACAC...CCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGCTCGTCTCCTTGGTGCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGTGTCCGTGTGGGGCTaGCCCCCGCCATCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCVSVWG*PPPSAG
Trigger: CCCGGCTGATGGCGGGGGCCAGCCCCACACGGACAC...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGGCCCCCTCTCCAGTGTaGCGGCAGGTCGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLAPSPV*RQVGRE
Trigger: CTCCCTCCCGACCTGCCGCCACACTGGAGAGGGGGC...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp CGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCACGAAAGTGCAATCCATaGCTCCGCGATCTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RAFHREGTQQPQVELWRPRKCNP*LRDLRP
Trigger: CGGGCGCAGATCGCGGAGCCATGGATTGCACTTTCG...TGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCGGCTTTGCCTTACTGTaGGACCCCACGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PTAQAHEHLLTVVQQPAIGFALL*DPTWLQ
Trigger: CTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCC...GATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp GAGACAGGGACTCTCCCTGTCACTCAGGCTCACTGCGGCCTCCAACTCCTGGGCCCAGCCGCCTGTACCTaGCACACAGGTACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ETGTLPVTQAHCGLQLLGPAACT*HTGTWR
Trigger: CCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGG...GCCCAGGAGTTGGAGGCCGCAGTGAGCCTGAGTGACAGGGAGAGTCCCTGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
3UTR CAA 72 bp CAGTGGATCACCACAGCTGTCAGAGAGGCCCACCACTaGGCCACCGGGTCTACGCCGGTGGTGGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: QWITTAVREAHH*ATGSTPVVVAM
Trigger: CATGGCCACCACCACCGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp CGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTACACAGGGGTGGAGCTaGACTGCGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RRHTAAAGRTVEARVSCTTQGWS*TAVGLG
Trigger: CCCCAGCCCCACCGCAGTTCAGCTCCACCCCTGTGT...AGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR TCA 90 bp ATCGGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGGACGCTGGTGGTATCTaGGGGGCTGGGAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: IGHQRSAPSWPPVLGSRSDAGGI*GAGKPP
Trigger: CGGGGGCTTCCCAGCCCCTCAGATACCACCAGCGTC...CGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp CTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCGCAGCAGGTGACGGATaGGGTTCCAGAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LRVKIAPLGPSTAKAHSSAAGDG*GSRGGY
Trigger: GTAGCCTCCTCTGGAACCTCATCCGTCACCTGCTGC...GCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCTGTTCCCGGAATAGCTaGGTCACCTGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPCSRNS*VTWARG
Trigger: CCCCCTGGCCCAGGTGACTCAGCTATTCCGGGAACA...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAATGTTCCCGGAATAGCTaGGTCACCTGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQCSRNS*VTWARG
Trigger: CCCCCTGGCCCAGGTGACTCAGCTATTCCGGGAACA...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp GTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGGACCTTGTGGCCGGAGGGAGGCTTCTTTGCTGTaGGATGACCAGGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VLEVSPSSRATQGPCGRREASLL*DDQGPG
Trigger: TCCCGGCCCCTGGTCATCTCACAGCAAAGAAGCCTC...CCTCCGGCCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR GCA 90 bp TCCGCATCTACGACCAGTGGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGGTGAGGGCGCTGCCTaGGGCCCGCTCAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SASTTSGTVAKMVPPLTRGEGAA*GPLRKA
Trigger: AGCCTTCCTGAGCGGGCCGCAGGCAGCGCCCTCACC...CCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTCTCTGGACCTGGGTGTaGAAGGAGACGGGCGGGACC +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLLWTWV*KETGGT
Trigger: GGTCCCGCCCGTCTCCTTGCACACCCAGGTCCAGAG...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GCTGTCAGAAGCAGCGAGTCTGCCTTGATGAAGTGGGGCTGCAGCAGGACCGGGGGTCGTTACAGGGGCTaGCGTGGGGGCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: AVRSSESALMKWGCSRTGGRYRG*RGGSCD
Trigger: GTCACAGCTGCCCCCACGGCAGCCCCTGTAACGACC...CCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp GTGGGGCTGCAGCAGGACCGGGACCTGCTGGATCTGCGAGGTCACAGTGGTCGTTTGATGAAGTGGGGCTaGAGCAGGACCGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: VGLQQDRDLLDLRGHSGRLMKWG*SRTGTC
Trigger: GCAGGTCCCGGTCCTGCTGCAGCCCCACTTCATCAA...ACGACCACTGTGACCTCGCAGATCCAGCAGGTCCCGGTCCTGCTGCAGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp CCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCGGCCTTGCTGCCAGCTaGGAGCCGGTTGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPEVSTIMAAGLRVKIAPGLAAS*EPVDRQ
Trigger: CTGCCTATCAACCGGCTCGCAGCTGGCAGCAAGGCC...GGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCCATCTCTGCTCTCGGTaGCCAGCACGTTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPHLCSR*PARCAQ
Trigger: CTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGATG...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAGGTCCAGGTCAGCCTaGTTGCGATGCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPRSRSA*LRCLQK
Trigger: CTTCTGGAGGCATCGCAAGCAGGCTGACCTGGACCT...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGCGGTCTCTCAGACTCCTaGAGCACCCGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WSQGVGLSQNRKPPPPLCGLSDS*STRGRC
Trigger: GCACCTGCCCCGGGTGCTGCAGGAGTCTGAGAGACC...GCACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCGCAGCCTTGAAGGAGTaGAGAGCTGCCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPEVSTIMAAGLRVKIAPAALKE*RAALGR
Trigger: CCTGCCCAGGGCAGCTCTGCACTCCTTCAAGGCTGC...GGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTGGCCACCGGGTCTACGCCGGCTGGACCAGACTCTaGCTTGGCACAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VDHHSCQRGPPLGHRVYAGWTRL*LGTAQQ
Trigger: CTGCTGGGCTGTGCCAAGGCAGAGTCTGGTCCAGCC...GGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp GGCACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTTCACACAGGAACAGCTaGACGGCCTTGTCAATGGAG +
Preference number: 4 (lower is better)
Translates to: GTSRLYLAHRYLAGAWRVSHRNS*TALSME
Trigger: CTCCATTGACAAGGCCGTGCAGCTGTTCCTGTGTGA...AACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCCGGAAGCCTGGGGCCTaGTGCTGGTGCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FGKSAARGFRPDSAGSRARKPGA*CWCPGL
Trigger: CAGCCCAGGGCACCAGCAGCAGGCCCCAGGCTTCCG...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR GCA 90 bp GCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGACAGGGGTGGGGCCGGAAGCTCTGTaGCAGCCGCCTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASTQDRSCTGPKWLETGVGPEAL*QPPQAA
Trigger: AGCAGCCTGAGGCGGCTGGCACAGAGCTTCCGGCCC...CACCCCTGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp ATCGGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGGGGCCGGAAGCTCTGTaGCAGCCGCCTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGHQRSAPSWPPVLGSRSGPEAL*QPPQAA
Trigger: AGCAGCCTGAGGCGGCTGGCACAGAGCTTCCGGCCC...CGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGACAGGGGTGCCCGCCGCCTCAGACTaGGGTCGAGGAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ASTQDRSCTGPKWLETGVPAASD*GRGAGV
Trigger: CACACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGG...CACCCCTGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCGGGAGGAGGCTTCTTTaGTGTGAGATGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPGRRLL*CEMTRG
Trigger: GCCCCTGGTCATCTCACAGCAAAGAAGCCTCCTCCC...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR GCA 90 bp TGCGTCTCGGGCGCTGGCGCTAGCATCCACTCGCAGAGCACAGTCCTGCTGCAGCCGCTGCTCTGGCTTTaGCTTACTGTGGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: CVSGAGASIHSQSTVLLQPLLWL*LTVGPH
Trigger: GTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGG...CTGCAGCAGGACTGTGCTCTGCGAGTGGATGCTAGCGCCAGCGCCCGAGACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp CCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCTGCAGAGACGGCCGCTaGTCTGGCTTTGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: PTAQAHEHLLTVVQQPAICRDGR*SGFALL
Trigger: CAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCA...GATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAACAGTCCATCCTCCCGTaGCACCCAGGGACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQQSILP*HPGTLW
Trigger: CCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTG...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000578469.1
CDS-3UTR GCA 90 bp AGGTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGGACCTTGTGGCCGGACAGTCCATCCTCCCGTaGCACCCAGGGACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RSWKSVHPPVPPRDLVAGQSILP*HPGTLW
Trigger: CCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTG...TCCGGCCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR CCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGGTTCGTGTCCTGCCCTaGCCTCAGAGGCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGVRVLP*PQRRPG
Trigger: GCCGGGCCGCCTCTGAGGCCAGGGCAGGACACGAAC...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCACATCTTCAATGGAGTaGGTGCAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPTSSME*VQAGEG
Trigger: CCCCTCCCCAGCCTGCACCCACTCCATTGAAGATGT...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGCAGCCTCCCGGAGGGCTaGGGTAGCCTAACACAGGGG +
Preference number: 4 (lower is better)
Translates to: WSQGVGLSQNRKPPPPLCSLPEG*GSLTQG
Trigger: CCCCTGTGTTAGGCTACCCCAGCCCTCCGGGAGGCT...GCACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCGGTAGCGCTTCTCAATaGCGTTGTGGGCTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SGLPPRRHTAAAGRTVEAGSASQ*RCGLCA
Trigger: AGCGCACAGCCCACAACGCCATTGAGAAGCGCTACC...GGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCGTGGGGCCGTGTGACTaGCTCACCGTAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPVGPCD*LTVDKE
Trigger: CTCTTTGTCTACGGTGAGCCAGTCACACGGCCCCAC...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp ATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACAGGCCCGTGGGAGACTaGTCTTCACTCTCAATGCAG +
Preference number: 4 (lower is better)
Translates to: IAPLGPSTAKAHSSRRSNRPVGD*SSLSMQ
Trigger: CTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCT...GTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCGGCAGAGCCACTGCATaGCAGGAGGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPGRATA*QEALSH
Trigger: GTGGCTCAGTGCCTCCTGCCATGCAGTGGCTCTGCC...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CCAGCAAGGAGGCCAAGGGGTTGCAGGACAGGCAGAGGAAGACGAGCGTGCACAGGCCAGGGGGTCCACTaGGTTCCCGGCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PARRPRGCRTGRGRRACTGQGVH*VPGQAV
Trigger: TACAGCTTGGCCGGGAACCCAGTGGACCCCCTGGCC...TGTGCACGCTCGTCTTCCTCTGCCTGTCCTGCAACCCCTTGGCCTCCTTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp CGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGAGAGGCCCACCACTTaGCCACCGGGTCTACGCCGG +
Preference number: 4 (lower is better)
Translates to: RRHTAAAGRTVEARVSCTERPTT*PPGLRR
Trigger: CCGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTC...AGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCATGGCCTTCTCACAGATaGTCAGGCTGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: RAFHREGTQQPQVELWRPWPSHR*SGWLDQ
Trigger: CTGGTCCAGCCAGCCTGACCATCTGTGAGAAGGCCA...TGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CCACACACAAGCCACGGCACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGCACGGCCTTGTCAATaGAGCTGCTGGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PHTSHGTSRLYLAHRYLAARPCQ*SCWLVW
Trigger: CCACACCAGCCAGCAGCTCCATTGACAAGGCCGTGC...CGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTGCCGTGGCTTGTGTGTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp GTCTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCTGCCGCCACAGGCTaGTGCGCACCACAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VLGSRSRPSGLPPRRHTAAAATG*CAPQEA
Trigger: TGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGCAGC...TGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTGGAACACCCTCCGCATaGCGGGCCGGAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GTQQPQVELWRPESLALPGTPSA*RAGSSV
Trigger: CACAGAGCTTCCGGCCCGCCATGCGGAGGGTGTTCC...AGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTCTGCGGTCGAGGAGCTaGTGTGTCCGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSRRSNCGGQSLLHCLRPLRSRS*CVRVGL
Trigger: CAGCCCCACACGGACACACCAGCTCCTCGACCGCAG...AGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGCCTGCGGTCGAGGAGCTaGTGTGTCCGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WSQGVGLSQNRKPPPPLCLRSRS*CVRVGL
Trigger: CAGCCCCACACGGACACACCAGCTCCTCGACCGCAG...GCACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp GCGGGGGAGAAAGGAAGCCTTTGCCGGGTAAGGGGCTACCGCGACGCCACTTGTCCTTTCCCTAGGTGCTaGGGGAGGGCCCAAGCACTC +
Preference number: 4 (lower is better)
Translates to: AGEKGSLCRVRGYRDATCPFPRC*GRAQAL
Trigger: GAGTGCTTGGGCCCTCCCCCAGCACCTAGGGAAAGG...ACAAGTGGCGTCGCGGTAGCCCCTTACCCGGCAAAGGCTTCCTTTCTCCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp AGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGGGTTCCCCTCACACACAGCCTCCCTTaGTATCACATCCCATGTGCG +
Preference number: 4 (lower is better)
Translates to: SRLYLAHRYLAGAWRVPLTHSLP*YHIPCA
Trigger: CGCACATGGGATGTGATACCAAGGGAGGCTGTGTGT...GAGGGGAACCCGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp CCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAGCTCTGTCCACGCTTCGAGGGTCGAAACAGTACTaGAAGAGGCGGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PASPSACPSVSSALSTLRGSKQY*KRRRAA
Trigger: AGCCGCCCTCCGCCTCTTCCAGTACTGTTTCGACCC...TCGAAGCGTGGACAGAGCTGAGGACACGGACGGACAGGCGGACGGACTGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp GTCAGAAGCAGCGAGTCTGCCTTGATGAAGTGGGGCTGCAGCAGGACCGGGACCTGGGGGACCACACTCTaGACAGGGGTGAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VRSSESALMKWGCSRTGTWGTTL*TGVRAL
Trigger: CAGCGCCCTCACCCCTGTCCAGAGTGTGGTCCCCCA...GGTCCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR TCA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTGGGCCCGGGCAGCCTTaGAGGAGTGCAGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVAGPGQP*RSAELP
Trigger: GGGCAGCTCTGCACTCCTTCAAGGCTGCCCGGGCCC...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp TGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGCCCGGGATGGGGGAGGTaGGACGTGCCAGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: WSQGVGLSQNRKPPPPLCPGWGR*DVPDFL
Trigger: CAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGG...GCACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR TCA 90 bp CTGTCCGTCCGTGTCCTCAGCTCTGTCCACGCTTCGATAGGCCTGACGCAGCCCGAGGCTTCTTTGCTGTaGGATGACCAGGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSVRVLSSVHASIGLTQPEASLL*DDQGPG
Trigger: TCCCGGCCCCTGGTCATCTCACAGCAAAGAAGCCTC...GGGCTGCGTCAGGCCTATCGAAGCGTGGACAGAGCTGAGGACACGGACGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR TCA 90 bp GAGACAGGGACTCTCCCTGTCACTCAGGCTCACTGCGGCCTCCAACTCCTGGGCCCTGTCTGTCCCGTCTaGCACACACACAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ETGTLPVTQAHCGLQLLGPVCPV*HTHSLP
Trigger: AGGGAGGCTGTGTGTGTGTCAGACGGGACAGACAGG...GCCCAGGAGTTGGAGGCCGCAGTGAGCCTGAGTGACAGGGAGAGTCCCTGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp CACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTGGTGAGGGCGCTGCCTaGGGCCCGCTCAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: HADLHYVHVSLPRRRERPGEGAA*GPLRKA
Trigger: AGCCTTCCTGAGCGGGCCGCAGGCAGCGCCCTCACC...AGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAAAGCAGGACCGGGACCTaGTGGATCTGCGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQSRTGT*WICEVT
Trigger: TGTGACCTCGCAGATCCAGCAGGTCCCGGTCCTGCT...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp GGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGGCAAAGGCCCTGTCCAGGGGACTGAGACCTaGCGCCTTCACAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GTVAKMVPPLTRVGKGPVQGTET*RLHSGS
Trigger: GGAGCCACTGTGAAGGCGGCAGGTCTCAGTCCCCTG...GACAGGGCCTTTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp ACTGCCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAACAGAGGCCGGGGCCTTaGTGCCAGCTGCGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TAFGLQSFDAGQKLHGTKQRPGP*CQLRAG
Trigger: ACCGGCTCGCAGCTGGCAGCAAGGCCCCGGCCTCTG...TTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTCCGAGTCACTGCCACTaGCACCGCTGCCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCPSHCH*HRCHCP
Trigger: GGGGCAGTGGCAGCGGTGGCAGTGGCAGTGACTCGG...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp ACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCAGCATGCCCCGGCTGTaGAGAGACGGCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TMYTSLSHDGERGLWGRASMPRL*RDGRCS
Trigger: AGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCT...GGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGACAGGGGTGATGGTAGACCAGGGCTaGGTCTCGGGCGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ASTQDRSCTGPKWLETGVMVDQG*VSGAGA
Trigger: AGCGCCAGCGCCCGAGACGCAGCCCTGGTCTACCAT...CACCCCTGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTAGGTGCCCGCCTGTGTaGTTCCCCATGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLRCPPV*FPMVCS
Trigger: GCTGCACACCATGGGGAAGCACACAGGCGGGCACCT...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGTGCCCGCCTGTGTaGTTCCCCATGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WGRALLAVRESQVGFRQHRCPPV*FPMVCS
Trigger: GCTGCACACCATGGGGAAGCACACAGGCGGGCACCT...GTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGTGGTCCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGAGACACGGCATCCCCTaGACACTCTGCCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SGPTAQAHEHLLTVVQQPRHGIP*TLCQVQ
Trigger: CTGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCT...CGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGGACCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCAGGCCTGGCGGGCACTaGTCAGGAAGAAGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPRPGGH*SGRSVS
Trigger: TGACACGCTTCTTCCTGAGCAGTGCCCGCCAGGCCT...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TCTCGGCCAGCGTCGCCACAGACACGGCATCCCCTGCACACTCTGCCAGGTTCAGTAGCCAGGCTGTCCTaGAGGTACCCACTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SRPASPQTRHPLHTLPGSVARLS*RYPLAF
Trigger: GAAGGCCAGTGGGTACCTGCAGGACAGCCTGGCTAC...TGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCTGTGGCGACGCTGGCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp CTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCAGCATGCCCACGCGCTaGCCGGGCGCCGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LAVRESQVGFRQHREMYPSMPTR*PGADRK
Trigger: CTTCCTGTCGGCGCCCGGGCAGCGCGTGGGCATGCT...GGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCAAGCTTCTCGAGTGTaGGCGCCGCCTCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FHREGTQQPQVELWRPESQASRV*APPQPA
Trigger: TGCTGGCTGAGGCGGCGCGCACACTCGAGAAGCTTG...AGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CCAGCAAGGAGGCCAAGGGGTTGCAGGACAGGCAGAGGAAGACGAGCGTGCACACAAGCTTCTCGAGTGTaGGCGCCGCCTCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PARRPRGCRTGRGRRACTQASRV*APPQPA
Trigger: TGCTGGCTGAGGCGGCGCGCACACTCGAGAAGCTTG...TGTGCACGCTCGTCTTCCTCTGCCTGTCCTGCAACCCCTTGGCCTCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTGCTCGGCCCCTGCAGTaGCCCGATCGGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVAARPLQ*PDRPPE
Trigger: CTCTGGTGGCCGATCGGGGCACTGCAGGGGCCGAGC...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCAAAATGGCTCGGCCCCTaGAGTGCCCCGATCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSKWLGP*SAPIGH
Trigger: GTGGCCGATCGGGGCACTGCAGGGGCCGAGCCATTT...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CCACGGCACCAGCCGCCTGTACCTGGCACACAGGTACCTGGCGGGGGCCTGGCGACTGAGTCACGCACGTaGAGTCATGTATCCCACAAA +
Preference number: 4 (lower is better)
Translates to: PRHQPPVPGTQVPGGGLATESRT*SHVSHK
Trigger: TTTGTGGGATACATGACTGCACGTGCGTGACTCAGT...CGCCAGGCCCCCGCCAGGTACCTGTGTGCCAGGTACAGGCGGCTGGTGCCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCGTTCGTGTCCTGCCCTaGCCTCAGAGGCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGVRVLP*PQRRPG
Trigger: GCCGGGCCGCCTCTGAGGCCAGGGCAGGACACGAAC...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AGCGAGTCTGCCTTGATGAAGTGGGGCTGCAGCAGGACCGGGACCTGCTGGATCGCCCTGTCTGCACAGTaGTGCCAGAGACCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SESALMKWGCSRTGTCWIALSAQ*CQRPGD
Trigger: GTCCCCTGGTCTCTGGCACCACTGTGCAGACAGGGC...GATCCAGCAGGTCCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp CGGGACCTGCTGGATCTGCGAGGTCACAGTGGTCGTTACAGGGGCTGCCGTGGGGGACTGTTGCCAAGATaGTTCCGCCACTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: RDLLDLRGHSGRYRGCRGGLLPR*FRHSPG
Trigger: CCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCC...CCCACGGCAGCCCCTGTAACGACCACTGTGACCTCGCAGATCCAGCAGGTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp AGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGAGACGGCCGCTGCTCTaGCTTTGCCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RPLGQSPACSPGKPSWLPRRPLL*LCLAVL
Trigger: GAGGACAGCAAGGCAAAGCCAGAGCAGCGGCCGTCT...CGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGGCTATGGTAGACGCTaGTGGTATCTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAAGYGRR*WYLRGW
Trigger: CCAGCCCCTCAGATACCACCAGCGTCTACCATAGCC...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCTGTGTGCTTCCCCATaGTGTGCAGCTGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRVKIAPLGPSTAKAHSSLCASP*CAAGAA
Trigger: AGCTGCACCAGCTGCACACCATGGGGAAGCACACAG...GCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CCGAGGGCATCCGAGAATTCCTTGTCCCCATCAGCTGACCCAGGGCTGGGGTTGTCCACGAAGAAACGGTaGCCCACGGGGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PRASENSLSPSADPGLGLSTKKR*PTGWQS
Trigger: GCTCTGCCACCCCGTGGGCCACCGTTTCTTCGTGGA...CAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATTCTCGGATGCCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp CCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCGCACGGCCTTGTCAATaGAGCTGCTGGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PPEVSTIMAAGLRVKIAPARPCQ*SCWLVW
Trigger: CCACACCAGCCAGCAGCTCCATTGACAAGGCCGTGC...GGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCCTGCTCAGGTCCCGTTaGAAGCCACGCAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPLLRSR*KPRSSR
Trigger: CCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGCTGGTGTGTCCGTGTaGGGCTGGCCCCCGCCATCA +
Preference number: 4 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCAGVSV*GWPPPS
Trigger: TGATGGCGGGGGCCAGCCCCACACGGACACACCAGC...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp GCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGAGACGGCCGCTGCTCTaGCTTTGCCTTACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: AFHREGTQQPQVELWRPERRPLL*LCLTVG
Trigger: TCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCT...CTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp TGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAGCTCTGTCCACGCTTCGATACGGCTCCTAGCTCCGTaGACTAGGCGGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: CQSVRLSVRVLSSVHASIRLLAP*TRRGRK
Trigger: CTTTCTCCCCCGCCTAGTCCACGGAGCTAGGAGCCG...TATCGAAGCGTGGACAGAGCTGAGGACACGGACGGACAGGCGGACGGACTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR TCA 90 bp CATCAGAACAGCTGTTCAGCAGCTGCAGGTACCCGAGGGCATCCGAGAATTCCTGTACACGGCGGGGCCTaGGTGGGGCCGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: HQNSCSAAAGTRGHPRIPVHGGA*VGPCDW
Trigger: CCAGTCACACGGCCCCACTCAGGCCCCGCCGTGTAC...AGGAATTCTCGGATGCCCTCGGGTACCTGCAGCTGCTGAACAGCTGTTCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp TTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTAGACGCTGCAGCAGGTaGCGGATGAGGTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FHREGTQQPQVELWRPESRRCSR*RMRFQR
Trigger: CCTCTGGAACCTCATCCGTCACCTGCTGCAGCGTCT...AGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTTCTCCCATGGGGTACTaGGCACGGACCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLSPMGY*ARTSPH
Trigger: ATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGA...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp ACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCGCATGAGCATCTGCTaGCAGTCGTGCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: TMYTSLSHDGERGLWGRARMSIC*QSCSSR
Trigger: CCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCG...GGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp ATCGGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCATGAGCATCTGCTaGCAGTCGTGCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IGHQRSAPSWPPVLGSRSRMSIC*QSCSSR
Trigger: CCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCG...CGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCTGGGGGTCTGCAGGATaGTCAGTGGCACTGACTCTT +
Preference number: 4 (lower is better)
Translates to: LRVKIAPLGPSTAKAHSSWGSAG*SVALTL
Trigger: AAGAGTCAGTGCCACTGAGCATCCTGCAGACCCCCA...GCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GCTGCAGCAGGACCGGGACCTGCTGGATCTGCGAGGTCACAGTGGTCGTTACAGAGCAGGACCGGGACCTaGTGGATCTGCGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: AAAGPGPAGSARSQWSLQSRTGT*WICEVT
Trigger: TGTGACCTCGCAGATCCAGCAGGTCCCGGTCCTGCT...CTGTAACGACCACTGTGACCTCGCAGATCCAGCAGGTCCCGGTCCTGCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp ACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCAGGGGACTGAGACCTaGCGCCTTCACAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TMYTSLSHDGERGLWGRAQGTET*RLHSGS
Trigger: GGAGCCACTGTGAAGGCGGCAGGTCTCAGTCCCCTG...GGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGGACCAGTGGGACTGTTaGCAAGATGGTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: AFHREGTQQPQVELWRPEDQWDC*QDGSAT
Trigger: AGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTC...CTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp TGGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGGCAAAGGCCCTGTGGCCTTGCTGCCAGCTaGGAGCCGGTTGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: WDCCQDGSATHQGRQRPCGLAAS*EPVDRQ
Trigger: CTGCCTATCAACCGGCTCGCAGCTGGCAGCAAGGCC...ACAGGGCCTTTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp CTCGCTCTAAGAGATGTTCCCGGAATAGCTGAGTCACCTGGGCCAGGGGGTCCAAGAGGAAGACGAGCGTaGACAGGGCCAGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LALRDVPGIAESPGPGGPRGRRA*TGPGGS
Trigger: GCTCCCGCCTGGCCCTGTGCACGCTCGTCTTCCTCT...TGGACCCCCTGGCCCAGGTGACTCAGCTATTCCGGGAACATCTCTTAGAGCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTTGGTGGCAGTGAGGTaGCCGCCTGTGTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLLVAVR*PPVCFP
Trigger: GGGGAAGCACACAGGCGGGCACCTCACTGCCACCAA...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAAAGACACGGCATCCCCTaGACACTCTGCCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQRHGIP*TLCQVQ
Trigger: CTGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCT...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACGTAGCCAGGCTGTCCTaGAGGTACCCACTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WGRALLAVRESQVGFRQHVARLS*RYPLAF
Trigger: GAAGGCCAGTGGGTACCTGCAGGACAGCCTGGCTAC...GTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp ACAGGTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGGACCTTGTGGCCGGGGAGGAGGCTTCTTTaGTGTGAGATGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TGPGSQSILPCHPGTLWPGRRLL*CEMTRG
Trigger: GCCCCTGGTCATCTCACAGCAAAGAAGCCTCCTCCC...CGGCCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR GCA 90 bp CTGTCCGTCCGTGTCCTCAGCTCTGTCCACGCTTCGATAGGCCTGACGCAGCCCGAGAAAGGAAGCCTTTaGCGGGTAAGGGGCTACCGC +
Preference number: 4 (lower is better)
Translates to: LSVRVLSSVHASIGLTQPEKGSL*RVRGYR
Trigger: GCGGTAGCCCCTTACCCGGCAAAGGCTTCCTTTCTC...GGGCTGCGTCAGGCCTATCGAAGCGTGGACAGAGCTGAGGACACGGACGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp CATCTACGACCAGTGGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGAGCTGCCTGGGGAGCTaGTATCGGGGCTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: HLRPVGLLPRWFRHSPGSSCLGS*YRGWQG
Trigger: ACCCTGCCAGCCCCGATACCAGCTCCCCAGGCAGCT...CGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp GCCAGCTGCGAGCCGGTTGATAGGCAGCTTCTCCGCATCTACGACCAGTGGGACTGGAGACAAGCTGCCTaGGGAGCTGGTATCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASCEPVDRQLLRIYDQWDWRQAA*GAGIGA
Trigger: AGCCCCGATACCAGCTCCCCAGGCAGCTTGTCTCCA...GTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCAATGTGGCAGGAGGTaGAGACAAGCTGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRQCGRR*RQAAWG
Trigger: TCCCCAGGCAGCTTGTCTCCACCTCCTGCCACATTG...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp GCAGGACCGGGACCTGCTGGATCTGCGAGGTCACAGTGGTCGTTACAGGGGCTGCAATGTGGCAGGAGGTaGAGACAAGCTGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AGPGPAGSARSQWSLQGLQCGRR*RQAAWG
Trigger: TCCCCAGGCAGCTTGTCTCCACCTCCTGCCACATTG...CAGCCCCTGTAACGACCACTGTGACCTCGCAGATCCAGCAGGTCCCGGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAACGGGTACATCTTCAATaGAGTGGGTGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQRVHLQ*SGCRLG
Trigger: CCCCAGCCTGCACCCACTCCATTGAAGATGTACCCG...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTGGGAGAAAGCGGGCATaGACGGGTACATCTTCAATG +
Preference number: 4 (lower is better)
Translates to: SRSRPSGLPPRRHTAAAGGRKRA*TGTSSM
Trigger: CATTGAAGATGTACCCGTCCATGCCCGCTTTCTCCC...ACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCCAGGCAGCGGCTGCTaGGTGTTCCCGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGPGSGC*VFPGGL
Trigger: AAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGG...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp GTCTGCCTTGATGAAGTGGGGCTGCAGCAGGACCGGGACCTGCTGGATCTGCGATCTGCGAGGTCACAGTaGTCGTTACAGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VCLDEVGLQQDRDLLDLRSARSQ*SLQGLP
Trigger: CGGCAGCCCCTGTAACGACCACTGTGACCTCGCAGA...TCGCAGATCCAGCAGGTCCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp GCCAGCTGCGAGCCGGTTGATAGGCAGCTTCTCCGCATCTACGACCAGTGGGACAGGACCGGGACCTGCTaGATCTGCGAGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: ASCEPVDRQLLRIYDQWDRTGTC*ICEVTV
Trigger: CACTGTGACCTCGCAGATCCAGCAGGTCCCGGTCCT...GTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCTGCCGCCTTCACAGTaGCTCCGTCTGTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRLPPSQ*LRLSSW
Trigger: CCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAG...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCAGCCCTGTCTGCACAGTaGTGCCAGAGACCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSALSAQ*CQRPGD
Trigger: GTCCCCTGGTCTCTGGCACCACTGTGCAGACAGGGC...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAGCGAATGTAGTCGATaGCCTTGCGCAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPSECSR*PCARQQ
Trigger: CTGCTGTCTTGCGCAAGGCCATCGACTACATTCGCT...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCGCTGTCCTCAAAGACTaGGCTGTCAGGCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPAVLKD*AVRLRV
Trigger: GACTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGC...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAAGCTGTCCTCAAAGACTaGGCTGTCAGGCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQAVLKD*AVRLRV
Trigger: GACTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGC...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp ACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCTGTGCCAGGCAGGCCTaGCGGGCACTGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TYTMYTSLSHDGERGLWGCARQA*RALLRK
Trigger: CTTCCTGAGCAGTGCCCGCCAGGCCTGCCTGGCACA...GCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCGTACAGGCTCTCCCATaGGGTACTGAGCACGGACCA +
Preference number: 4 (lower is better)
Translates to: PPEVSTIMAAGLRVKIAPVQALP*GTEHGP
Trigger: TGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTAC...GGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCGTACAGGCTCTCCCATaGGGTACTGAGCACGGACCA +
Preference number: 4 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRVQALP*GTEHGP
Trigger: TGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTAC...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp ACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCGGCCAGGGGGTCCACTaGGTTCCCGGCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TYTMYTSLSHDGERGLWGGQGVH*VPGQAV
Trigger: TACAGCTTGGCCGGGAACCCAGTGGACCCCCTGGCC...GCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCCCGGGTCTACGCCGGTaGTGGTGGCCATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FGKSAARGFRPDSAGSRAPGLRR*WWPCWN
Trigger: GTTCCAGCATGGCCACCACCACCGGCGTAGACCCGG...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAATGGCCTTCTCACAGATaGTCAGGCTGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQWPSHR*SGWLDQ
Trigger: CTGGTCCAGCCAGCCTGACCATCTGTGAGAAGGCCA...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGCGCACGGCCTTGTCAATaGAGCTGCTGGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WSQGVGLSQNRKPPPPLCARPCQ*SCWLVW
Trigger: CCACACCAGCCAGCAGCTCCATTGACAAGGCCGTGC...GCACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCTCAAGGGCGGAAGCCTaGGGCCTGCTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGSRAEA*GLLLVP
Trigger: GGGCACCAGCAGCAGGCCCCAGGCTTCCGCCCTTGA...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR CCA 90 bp GACTCTCCCTGTCACTCAGGCTCACTGCGGCCTCCAACTCCTGGGCTCAAGCTGCTGCTCAGGTCCCGTTaGAAGCCACGCAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: DSPCHSGSLRPPTPGLKLLLRSR*KPRSSR
Trigger: CCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG...CAGCTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCCTGAGTGACAGGGAGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCCTGCGGTCGAGGAGCTaGTGTGTCCGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FGKSAARGFRPDSAGSRALRSRS*CVRVGL
Trigger: CAGCCCCACACGGACACACCAGCTCCTCGACCGCAG...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCTGCACGGGACCAAAGTaGCTAGAGACAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRCTGPK*LETGVL
Trigger: CAGCACCCCTGTCTCTAGCCACTTTGGTCCCGTGCA...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCAGGTCAGCACCATCATaGCCGCCGGTCTTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPRSAPS*PPVLGS
Trigger: TGACCCTAAGACCGGCGGCCATGATGGTGCTGACCT...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp CACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCCAAAGCCGCCTCGCTaGAGGGTGGCTCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: HADLHYVHVSLPRRRERPPKPPR*RVARPW
Trigger: CCATGGACGAGCCACCCTTCAGCGAGGCGGCTTTGG...AGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR TCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTGCACTGACTCTTCCTTaGTACCAGGCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLALTLP*YQAQGR
Trigger: TCTCCCCTGGGCCTGGTATCAAGGAAGAGTCAGTGC...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR TCA 90 bp CTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCGATGCTCAGTGGCACTaGCTCTTCCTTGATACCAGG +
Preference number: 4 (lower is better)
Translates to: LRVKIAPLGPSTAKAHSSDAQWH*LFLDTR
Trigger: CCTGGTATCAAGGAAGAGTCAGTGCCACTGAGCATC...GCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR TCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCCAGGTTGGTGGCAGTaGGGTGCCCGCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGPGWWQ*GARLCA
Trigger: AGCACACAGGCGGGCACCTCACTGCCACCAACCTGG...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp AGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTGGCCATGCTGGAACTaGTGGAGAAGCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: RPLGQSPACSPGKPSWLPWPCWN*WRSCRQ
Trigger: CTGCCTACAGCTTCTCCATCAGTTCCAGCATGGCCA...CGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGAGGCCAGGCAGCGGCTaGTGGGTGTTCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRRPGSG*WVFPGG
Trigger: CCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCT...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GCCAGCTGCGAGCCGGTTGATAGGCAGCTTCTCCGCATCTACGACCAGTGGGACGTGACTGTCAGTAGCTaGTGGGGGACCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: ASCEPVDRQLLRIYDQWDVTVSS*WGTTLW
Trigger: CCAGAGTGTGGTCCCCCAGCAGCTACTGACAGTCAC...GTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp CCAGAGACCAGGGGACTGAGACCTGCCGCCTTCACAGTGGCTCCGTCTGTCTTCGGGACCTGCTGGATCTaGGAGGTCACAGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: PETRGLRPAAFTVAPSVFGTCWI*EVTVVV
Trigger: AACGACCACTGTGACCTCGCAGATCCAGCAGGTCCC...GAAGACAGACGGAGCCACTGTGAAGGCGGCAGGTCTCAGTCCCCTGGTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp ACTTCTTGCAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAACAGAGGCCGGGGCCTTaGTGCCAGCTGCGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TSCRETQAVAPVTQQVLEQRPGP*CQLRAG
Trigger: ACCGGCTCGCAGCTGGCAGCAAGGCCCCGGCCTCTG...TTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTGCAAGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTTGCCACCGCTGCCACTaGCCCTGCTGCCAAGGGACA +
Preference number: 4 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVACHRCH*PCCQGT
Trigger: TGTCCCTTGGCAGCAGGGGCAGTGGCAGCGGTGGCA...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCGGGAGCGGTCCAGCATaGCCCGGCTGTGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: SGKAKLASVSTGKCTPLFGSGPA*PGCAET
Trigger: CGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCCC...GAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGAGCCAGGGCCATCTCTaGTCTCGGTGCCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGSQGHL*SRCPAR
Trigger: ACGTGCTGGGCACCGAGAGCAGAGATGGCCCTGGCT...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTAGGTCCAGGTCAGCCTaGTTGCGATGCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLRSRSA*LRCLQK
Trigger: CTTCTGGAGGCATCGCAAGCAGGCTGACCTGGACCT...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GTCTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCATGCTTCCCCATGGTGTaGAGCTGGTGCAGCTTATGG +
Preference number: 4 (lower is better)
Translates to: VLGSRSRPSGLPPRRHTACFPMV*SWCSLW
Trigger: CCATAAGCTGCACCAGCTGCACACCATGGGGAAGCA...TGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAATGCTTCCCCATGGTGTaGAGCTGGTGCAGCTTATGG +
Preference number: 4 (lower is better)
Translates to: RGRDGGGETCQTSCRETQCFPMV*SWCSLW
Trigger: CCATAAGCTGCACCAGCTGCACACCATGGGGAAGCA...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTGCAGCCTTGAAGGAGTaGAGAGCTGCCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCAALKE*RAALGR
Trigger: CCTGCCCAGGGCAGCTCTGCACTCCTTCAAGGCTGC...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp ACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCGCCGCCACAGGCTGGTaGGCACCACAAGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TYTMYTSLSHDGERGLWGAATGW*APQEAG
Trigger: ACCTGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGC...GCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp ACTTCTTGCAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAATTTGCCACCGGGGCCTaGCCGCCGCCTCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: TSCRETQAVAPVTQQVLEFATGA*PPPQTA
Trigger: CGCAGTCTGAGGCGGCGGGCAGGCCCCGGTGGCAAA...TTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTGCAAGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR GCA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCGCCCGGGCCAGTCCCTaGCAGTCCGTCCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSARASP*QSVRLS
Trigger: GGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGC...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp ACTGCCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAAGCTGCCTGGGGAGCTaGTATCGGGGCTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TAFGLQSFDAGQKLHGTKSCLGS*YRGWQG
Trigger: ACCCTGCCAGCCCCGATACCAGCTCCCCAGGCAGCT...TTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCGCCCTGTCTGCACAGTaGTGCCAGAGACCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: FGKSAARGFRPDSAGSRAALSAQ*CQRPGD
Trigger: GTCCCCTGGTCTCTGGCACCACTGTGCAGACAGGGC...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTGGACTGTTGCCAAGATaGTTCCGCCACTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: FHREGTQQPQVELWRPESGLLPR*FRHSPG
Trigger: CCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCC...AGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCTATGGTAGACGCTGGTaGTATCTGAGGGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAAYGRRW*YLRGWE
Trigger: TTCCCAGCCCCTCAGATACCACCAGCGTCTACCATA...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTGGCTATGGTAGACGCTaGTGGTATCTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FHREGTQQPQVELWRPESGYGRR*WYLRGW
Trigger: CCAGCCCCTCAGATACCACCAGCGTCTACCATAGCC...AGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCAGCTGACCCAGGGCTaGGGTTGGGCTGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGQLTQG*GWAGSH
Trigger: GTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTG...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCGCCAAGCTTCTCGAGGATGGTCAGGCTGGCTaGACCAGACTCTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HEHLLTVVQQPAIAKLLEDGQAG*TRLCLG
Trigger: GCCAAGGCAGAGTCTGGTCCAGCCAGCCTGACCATC...CTCGAGAAGCTTGGCGATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp ATCCCCTGCACACTCTGCCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGCAGTAATGGAGCTGCTGGCTaGTGTGGTAGCCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: IPCTLCQVQGTQRQVGGSNGAAG*CGSQAV
Trigger: GACAGCCTGGCTACCACACCAGCCAGCAGCTCCATT...ACTGCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp GCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGACAGGGGTGGCACGGCCTTGTCAATaGAGCTGCTGGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ASTQDRSCTGPKWLETGVARPCQ*SCWLVW
Trigger: CCACACCAGCCAGCAGCTCCATTGACAAGGCCGTGC...CACCCCTGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCCATCAGCCGGGCCGTaGCCTCATGTAGGAACACCC +
Preference number: 4 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGPSAGP*PHVGTP
Trigger: GGGTGTTCCTACATGAGGCCACGGCCCGGCTGATGG...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CACCACAAGAAGCAGGTCACACAGGAACAGCTGCACGGCCTTGTCAATGGAGCTGCTGGTGTGTCCGTGTaGGGCTGGCCCCCGCCATCA +
Preference number: 4 (lower is better)
Translates to: HHKKQVTQEQLHGLVNGAAGVSV*GWPPPS
Trigger: TGATGGCGGGGGCCAGCCCCACACGGACACACCAGC...AGCTCCATTGACAAGGCCGTGCAGCTGTTCCTGTGTGACCTGCTTCTTGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp AGAGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCTGCACGGGACCAAAGTaGCTAGAGACAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGLWGRALLAVRESQVGFCTGPK*LETGVL
Trigger: CAGCACCCCTGTCTCTAGCCACTTTGGTCCCGTGCA...GAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CACAACAGGTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGGACCTTGTGCCGACCAGATTCAGCTaGGAGCCGGGCCAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: HNRSWKSVHPPVPPRDLVPTRFS*EPGQAL
Trigger: TAAAGCCTGGCCCGGCTCCCAGCTGAATCTGGTCGG...CACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGACCTGTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR CCA 90 bp CACCACAAGAAGCAGGTCACACAGGAACAGCTGCACGGCCTTGTCAATGGAGCTGGGAAGGGGGCACCGTaGCAGGGCCCAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HHKKQVTQEQLHGLVNGAGKGAP*QGPTLL
Trigger: CAGCAAGGTTGGGCCCTGCCACGGTGCCCCCTTCCC...AGCTCCATTGACAAGGCCGTGCAGCTGTTCCTGTGTGACCTGCTTCTTGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
3UTR CAA 72 bp GGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTaGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GAEPCLQSGKAK*ASVSTGKCTPL
Trigger: GAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261646.10
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGTGACTGTCAGTAGCTaGTGGGGGACCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: RRHTAAAGRTVEARVSCTVTVSS*WGTTLW
Trigger: CCAGAGTGTGGTCCCCCAGCAGCTACTGACAGTCAC...AGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp ACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCGGGACCTGCTGGATCTaGGAGGTCACAGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: TMYTSLSHDGERGLWGRAGTCWI*EVTVVV
Trigger: AACGACCACTGTGACCTCGCAGATCCAGCAGGTCCC...GGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGAGCAGGACCGGGACCTaGTGGATCTGCGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGSRTGT*WICEVT
Trigger: TGTGACCTCGCAGATCCAGCAGGTCCCGGTCCTGCT...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GTGGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGGCAAAGGCCCTGGACCAGTGGGACTGTTaGCAAGATGGTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: VGLLPRWFRHSPGSAKALDQWDC*QDGSAT
Trigger: AGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTC...CAGGGCCTTTGCCGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR GCA 90 bp ATCGGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCTGTGTTCCCTCCACTaGCACAGGCCGACACCAGAT +
Preference number: 4 (lower is better)
Translates to: IGHQRSAPSWPPVLGSRSLCSLH*HRPTPD
Trigger: ATCTGGTGTCGGCCTGTGGCAGTGGAGGGAACACAG...CGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGACCGAGTCACTGCCACTaGCACCGCTGCCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: SWLPSAQGNVPLSSLYTGPSHCH*HRCHCP
Trigger: GGGGCAGTGGCAGCGGTGGCAGTGGCAGTGACTCGG...TCCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGAGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCGCTCTGGCTTTGCCTTaGTGTCCTCAAAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: RGLWGRALLAVRESQVGFALALP*CPQRLG
Trigger: GCCCAGTCTTTGAGGACAGCAAGGCAAAGCCAGAGC...GAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCTGCAGAGACGGCCGCTaGTCTGGCTTTGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FGKSAARGFRPDSAGSRACRDGR*SGFALL
Trigger: CAGCAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCA...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp GCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCGGTGCCCAGCACGTTaGGCCCAGGGCTATGGTAGA +
Preference number: 4 (lower is better)
Translates to: AVRESQVGFRQHREMYPSRCPAR*AQGYGR
Trigger: TCTACCATAGCCCTGGGCGCAACGTGCTGGGCACCG...AGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCAATCCCCTGCACACTCTaGCAGGTTCAGGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSIPCTL*QVQGTQ
Trigger: CTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGAT...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGCTGTTCAGCAGCTaGAGGTACCCGAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGQLFSS*RYPRAS
Trigger: GGATGCCCTCGGGTACCTGCAGCTGCTGAACAGCTG...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCCAGCTGTTCAGCAGCTaGAGGTACCCGAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: FGKSAARGFRPDSAGSRAQLFSS*RYPRAS
Trigger: GGATGCCCTCGGGTACCTGCAGCTGCTGAACAGCTG...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGAGCACCCGGGGCAGGTaGTCCACCAGCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTSTRGR*STSGHS
Trigger: GCTGTGCCCGCTGGTGGAGCACCTGCCCCGGGTGCT...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTCACACAGGAACAGCTaGACGGCCTTGTCAATGGAG +
Preference number: 4 (lower is better)
Translates to: STAKAHSSRRSNCGGQSLSHRNS*TALSME
Trigger: CTCCATTGACAAGGCCGTGCAGCTGTTCCTGTGTGA...GAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTGCCGCCACAGGCTGGTaGGCACCACAAGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HADLHYVHVSLPRRRERPAATGW*APQEAG
Trigger: ACCTGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGC...AGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTACGCAGGACAGAAGCTaGACGGGACCAAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLTQDRS*TGPKWL
Trigger: TAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGT...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCCAGAGTCTCTTGCACTaGCTTCGGCCTTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LGSRSRPSGLPPRRHTAAQSLLH*LRPSKL
Trigger: AAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTG...GGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTGAGGCCAGAGTCTCTTaGACTGCCTTCGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SSRRSNCGGQSLLHCLRPEARVS*TAFGLQ
Trigger: TTGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTC...AGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp ACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGTCAGTCCATCCTCCATCCATCAGCTCCTTTaGCACCGGGGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TQAVAPVTQQVLEVSPSSIHQLL*HRGLPA
Trigger: GGCGGGCAGGCCCCGGTGGCAAAGGAGCTGATGGAT...GGAGGATGGACTGACTTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR CCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGTGGAGACAAGCTGCCTaGGGAGCTGGTATCGGGGCT +
Preference number: 4 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGWRQAA*GAGIGA
Trigger: AGCCCCGATACCAGCTCCCCAGGCAGCTTGTCTCCA...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTGAGAGGAGCTCAATGTaGCAGGAGGTGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLERSSM*QEVETS
Trigger: GCTTGTCTCCACCTCCTGCCACATTGAGCTCCTCTC...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp GCTGTCAGAAGCAGCGAGTCTGCCTTGATGAAGTGGGGCTGCAGCAGGACCGGGGAGAGGAGCTCAATGTaGCAGGAGGTGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: AVRSSESALMKWGCSRTGERSSM*QEVETS
Trigger: GCTTGTCTCCACCTCCTGCCACATTGAGCTCCTCTC...CCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp ACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGACGGGCGGGACCCCTaGCGGGGAAGCCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TIVLENLQPVDSDQIQLGDGRDP*RGSQWQ
Trigger: CTGCCACTGGCTTCCCCGCCAGGGGTCCCGCCCGTC...TCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCAACTGTCAGTAGCTGCTaGGGGACCACACTCTGGACC +
Preference number: 4 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSTVSSC*GTTLWT
Trigger: GGTCCAGAGTGTGGTCCCCCAGCAGCTACTGACAGT...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CTGAGACCTGCCGCCTTCACAGTGGCTCCGTCTGTCTTCATGGCTGTCAGAAGCTCTGCCTTGATGAAGTaGGGCTGCAGCAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: LRPAAFTVAPSVFMAVRSSALMK*GCSRTG
Trigger: CCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGA...GCTTCTGACAGCCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAGGTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp CCAGCTGCGAGCCGGTTGATAGGCAGCTTCTCCGCATCTACGACCAGTGGGACTCTGCCGCCTTCACAGTaGCTCCGTCTGTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: PAASRLIGSFSASTTSGTLPPSQ*LRLSSW
Trigger: CCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAG...AGTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp TGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGTTCTCTCCACGGCTCTaGGCAGAGGCCGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CFGKSAARGFRPDSAGSRFSPRL*AEAGAL
Trigger: CAAGGCCCCGGCCTCTGCCCAGAGCCGTGGAGAGAA...CCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCTTCTCAATGGCGTTGTaGGCTGTGCGCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRFSMAL*AVRFSP
Trigger: TGGAGAGAAGCGCACAGCCCACAACGCCATTGAGAA...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CTCTCAATGCAGCCGCCACATAGATCTCGGCCAGCGTCGCCACAGACACGGCATGACAAGGGGCTGCTCTaGAAAGGTGAGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LSMQPPHRSRPASPQTRHDKGLL*KGEPAS
Trigger: GGATGCTGGCTCACCTTTCCAGAGCAGCCCCTTGTC...ATGCCGTGTCTGTGGCGACGCTGGCCGAGATCTATGTGGCGGCTGCATTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp TCTCACAGATGGTCAGGCTGGCTGGACCAGACTCTGCCTTGGCACAGCCCAGCAGCTGTCCTCAAAGACTaGGCTGTCAGGCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: SHRWSGWLDQTLPWHSPAAVLKD*AVRLRV
Trigger: GACTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGC...TGCTGGGCTGTGCCAAGGCAGAGTCTGGTCCAGCCAGCCTGACCATCTGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp CAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACACTATAGCTGCTGGGCAGCCTaGGCAAAGTCTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QSSTGASGQEAKHADLHYSCWAA*AKSPRA
Trigger: GGCCCGGGGAGACTTTGCCCAGGCTGCCCAGCAGCT...ATAGTGTAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp ATCCCCTGCACACTCTGCCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGCAGTAGGCCCGTGGGAGACTaGTCTTCACTCTCAATGCAG +
Preference number: 4 (lower is better)
Translates to: IPCTLCQVQGTQRQVGGSRPVGD*SSLSMQ
Trigger: CTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCT...ACTGCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp CTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCGGCAGAGCCACTGCATaGCAGGAGGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LAVRESQVGFRQHREMYPGRATA*QEALSH
Trigger: GTGGCTCAGTGCCTCCTGCCATGCAGTGGCTCTGCC...GGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTAGAGAGGCCCACCACTTaGCCACCGGGTCTACGCCGG +
Preference number: 4 (lower is better)
Translates to: KRQSSTGASGQEAKHADLERPTT*PPGLRR
Trigger: CCGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTC...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CTCGCTCTAAGAGATGTTCCCGGAATAGCTGAGTCACCTGGGCCAGGGGGTCCATCCCGCCGCAGCCAGTaGATCACCACAGCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LALRDVPGIAESPGPGGPSRRSQ*ITTAVR
Trigger: TCTGACAGCTGTGGTGATCCACTGGCTGCGGCGGGA...TGGACCCCCTGGCCCAGGTGACTCAGCTATTCCGGGAACATCTCTTAGAGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp CAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGTCAGTCCCCTTTCCCTAGGTGCTaGGGGAGGGCCCAAGCACTC +
Preference number: 4 (lower is better)
Translates to: QGDPSCSSCHTTGPGSQSPFPRC*GRAQAL
Trigger: GAGTGCTTGGGCCCTCCCCCAGCACCTAGGGAAAGG...GGACTGACTTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR CCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCCCTGGGCTTGGGGGTaGGGGTCGAAACAGTACTGG +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGPWAWG*GSKQYW
Trigger: CCAGTACTGTTTCGACCCCCACCCCCAAGCCCAGGG...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp GCTGTCAGAAGCAGCGAGTCTGCCTTGATGAAGTGGGGCTGCAGCAGGACCGGGACTGTCAGTAGCTGCTaGGGGACCACACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: AVRSSESALMKWGCSRTGTVSSC*GTTLWT
Trigger: TGTCCAGAGTGTGGTCCCCCAGCAGCTACTGACAGT...CCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR TCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCTGGTTGTTGATAAGCTaGAGCATGTCTTCGATGTCG +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPWLLIS*SMSSMS
Trigger: CGACATCGAAGACATGCTTCAGCTTATCAACAACCA...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp GGACCCCACGTGGCTCCAGGCCTCAGTTATTCTGTCTATGAAATGGGAGGTAGGGCACCAACAGCCCATTaGGCAGCCAGACCACTGGGG +
Preference number: 4 (lower is better)
Translates to: GPHVAPGLSYSVYEMGGRAPTAH*AARPLG
Trigger: CCCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGC...CCTACCTCCCATTTCATAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp GCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTGAGTGGGGCCGTGTaGCTGGCTCACCGTAGACAA +
Preference number: 4 (lower is better)
Translates to: AVRESQVGFRQHREMYPSLSGAV*LAHRRQ
Trigger: TTGTCTACGGTGAGCCAGTCACACGGCCCCACTCAG...AGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp GGTGCGCACCACAAGAAGCAGGTCACACAGGAACAGCTGCACGGCCTTGTCAATGCAGCAGGTGACGGATaGGGTTCCAGAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GAHHKKQVTQEQLHGLVNAAGDG*GSRGGY
Trigger: GTAGCCTCCTCTGGAACCTCATCCGTCACCTGCTGC...ATTGACAAGGCCGTGCAGCTGTTCCTGTGTGACCTGCTTCTTGTGGTGCGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp TTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGACACCAGGTTGGTGGCAGTaGGGTGCCCGCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: FKASTQDRSCTGPKWLETPGWWQ*GARLCA
Trigger: AGCACACAGGCGGGCACCTCACTGCCACCAACCTGG...TGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp GGTGCGCACCACAAGAAGCAGGTCACACAGGAACAGCTGCACGGCCTTGTCAATTCTCCCATGGGGTACTaGGCACGGACCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GAHHKKQVTQEQLHGLVNSPMGY*ARTSPH
Trigger: ATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGA...ATTGACAAGGCCGTGCAGCTGTTCCTGTGTGACCTGCTTCTTGTGGTGCGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp TCTCACAGATGGTCAGGCTGGCTGGACCAGACTCTGCCTTGGCACAGCCCAGCATGGCCATGCTGGAACTaGTGGAGAAGCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SHRWSGWLDQTLPWHSPAWPCWN*WRSCRQ
Trigger: CTGCCTACAGCTTCTCCATCAGTTCCAGCATGGCCA...TGCTGGGCTGTGCCAAGGCAGAGTCTGGTCCAGCCAGCCTGACCATCTGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp GCTAAGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGCACCGCCCAGGCGCATaGGCATCTGCTGACAGTCGT +
Preference number: 4 (lower is better)
Translates to: AKHADLHYVHVSLPRRREHRPGA*ASADSR
Trigger: ACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTG...CTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGGCCAGGCAGCGGCTaGTGGGTGTTCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGRPGSG*WVFPGG
Trigger: CCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCT...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp ACTTCTTGCAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAACTCTGGACCTGGGTGTaGAAGGAGACGGGCGGGACC +
Preference number: 4 (lower is better)
Translates to: TSCRETQAVAPVTQQVLELWTWV*KETGGT
Trigger: GGTCCCGCCCGTCTCCTTGCACACCCAGGTCCAGAG...TTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTGCAAGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CCAGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCTGTAGTCGATGGCCTTaGGCAAGACAGCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: PGAGMGEVRRARLLAGRPCSRWP*ARQQIY
Trigger: ATAAATCTGCTGTCTTGCGCAAGGCCATCGACTACA...GGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCGATCCTTCAGAGATTTaGTTTTGTGGACAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PTAQAHEHLLTVVQQPAIDPSEI*FCGQQC
Trigger: GCACTGCTGTCCACAAAAGCAAATCTCTGAAGGATC...GATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp CTCGCTCTAAGAGATGTTCCCGGAATAGCTGAGTCACCTGGGCCAGGGGGTCCACTGTGTTCCCTCCACTaGCACAGGCCGACACCAGAT +
Preference number: 4 (lower is better)
Translates to: LALRDVPGIAESPGPGGPLCSLH*HRPTPD
Trigger: ATCTGGTGTCGGCCTGTGGCAGTGGAGGGAACACAG...TGGACCCCCTGGCCCAGGTGACTCAGCTATTCCGGGAACATCTCTTAGAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp TTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGACATGCCACCGCTGCCACTaGCCCTGCTGCCAAGGGACA +
Preference number: 4 (lower is better)
Translates to: FKASTQDRSCTGPKWLETCHRCH*PCCQGT
Trigger: TGTCCCTTGGCAGCAGGGGCAGTGGCAGCGGTGGCA...TGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCCGAGTCACTGCCACTaGCACCGCTGCCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTPSHCH*HRCHCP
Trigger: GGGGCAGTGGCAGCGGTGGCAGTGGCAGTGACTCGG...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCACCGCTGCTCTGGCTTTaGCTTGCTGTCCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSPLLWL*LAVLKD
Trigger: GTCTTTGAGGACAGCAAGGCAAAGCCAGAGCAGCGG...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCGGGAGCGGTCCAGCATaGCCCGGCTGTGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSGSGPA*PGCAET
Trigger: CGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCCC...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGAAGAGGAAGACGAGCGTaGACAGGGCCAGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SWLPSAQGNVPLSSLYTGRGRRA*TGPGGS
Trigger: GCTCCCGCCTGGCCCTGTGCACGCTCGTCTTCCTCT...TCCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCTCAGCCTGCTTGCGATaGCTCCAGAAGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: FGKSAARGFRPDSAGSRASACLR*LQKYTA
Trigger: CGCCGTGTACTTCTGGAGGCATCGCAAGCAGGCTGA...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCTTGGTGGCAGTGAGGTaGCCGCCTGTGTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SGKAKLASVSTGKCTPLFLVAVR*PPVCFP
Trigger: GGGGAAGCACACAGGCGGGCACCTCACTGCCACCAA...GAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCGGTCTTCACTCTCAATaGAGCCGCCACATAGATCTC +
Preference number: 4 (lower is better)
Translates to: GHQRSAPSWPPVLGSRSRGLHSQ*SRHIDL
Trigger: GAGATCTATGTGGCGGCTGCATTGAGAGTGAAGACC...GCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTAAGCGTGTCAGAAAATaGAAGGCCCGTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GTQQPQVELWRPESLALPKRVRK*KARGRL
Trigger: CAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTT...AGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCCAGCTGTTCAGCAGCTaGAGGTACCCGAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: CSPGKPSWLPSAQGNVPLQLFSS*RYPRAS
Trigger: GGATGCCCTCGGGTACCTGCAGCTGCTGAACAGCTG...GAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCGTAGCCAGGCTGTCCTaGAGGTACCCACTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGVARLS*RYPLAF
Trigger: GAAGGCCAGTGGGTACCTGCAGGACAGCCTGGCTAC...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGGGGCCGGAAGCTCTGTaGCAGCCGCCTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLFWKICSPWIPTRFSWEGPEAL*QPPQAA
Trigger: AGCAGCCTGAGGCGGCTGGCACAGAGCTTCCGGCCC...CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR GCA 90 bp GTCACGCACGTGCAGTCATGTATCCCACAAATGACAGTCACCCCACTGATTCCTGGGCCGGAAGCTCTGTaGCAGCCGCCTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTHVQSCIPQMTVTPLIPGPEAL*QPPQAA
Trigger: AGCAGCCTGAGGCGGCTGGCACAGAGCTTCCGGCCC...AGGAATCAGTGGGGTGACTGTCATTTGTGGGATACATGACTGCACGTGCGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp CGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCCGCCGCCTCAGACTaGGGTCGAGGAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RLFWKICSPWIPTRFSWEPAASD*GRGAGV
Trigger: CACACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGG...CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCGCCTCGCTGAAGGGTaGCTCGTCCATGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTRLAEG*LVHGAA
Trigger: GGCTGCGCCATGGACGAGCCACCCTTCAGCGAGGCG...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTAAGCTGGTATCGGGGCTaGCAGGGTCTGTGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: KRQSSTGASGQEAKHADLSWYRG*QGLCPL
Trigger: CAGGGGGCACAGACCCTGCCAGCCCCGATACCAGCT...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTCAATGTGGCAGGAGGTaGAGACAAGCTGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCQCGRR*RQAAWG
Trigger: TCCCCAGGCAGCTTGTCTCCACCTCCTGCCACATTG...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGGAGAGGAGCTCAATGTaGCAGGAGGTGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLERSSM*QEVETS
Trigger: GCTTGTCTCCACCTCCTGCCACATTGAGCTCCTCTC...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGAGCCTCCCGGAGGGCTaGGGTAGCCTAACACAGGGG +
Preference number: 4 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRSLPEG*GSLTQG
Trigger: CCCCTGTGTTAGGCTACCCCAGCCCTCCGGGAGGCT...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp ACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGATGGCGGGGAAGCCAGTaGCAGGCCAGGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: TIVLENLQPVDSDQIQLGWRGSQ*QARQRL
Trigger: CAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCA...TCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTACCACACTCTGGACCTaGGTGTGCAAGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVATTLWT*VCKETG
Trigger: GCCCGTCTCCTTGCACACCCAGGTCCAGAGTGTGGT...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTGCCTTGATGAAGTaGGGCTGCAGCAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: LAVRESQVGFRQHREMYPSALMK*GCSRTG
Trigger: CCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGA...GGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp GTCAGAAGCAGCGAGTCTGCCTTGATGAAGTGGGGCTGCAGCAGGACCGGGACCCTCCGTCTGTCTTCATaGCTGTCAGAAGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: VRSSESALMKWGCSRTGTLRLSS*LSEAAS
Trigger: ACTCGCTGCTTCTGACAGCCATGAAGACAGACGGAG...GGTCCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp GCTAAGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGTCCACGAAGAAACGGTaGCCCACGGGGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AKHADLHYVHVSLPRRRESTKKR*PTGWQS
Trigger: GCTCTGCCACCCCGTGGGCCACCGTTTCTTCGTGGA...CTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACCGGGTCTACGCCGGTaGTGGTGGCCATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KRQSSTGASGQEAKHADLPGLRR*WWPCWN
Trigger: GTTCCAGCATGGCCACCACCACCGGCGTAGACCCGG...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp ACTGCCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAATCCCGCCGCAGCCAGTaGATCACCACAGCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: TAFGLQSFDAGQKLHGTKSRRSQ*ITTAVR
Trigger: TCTGACAGCTGTGGTGATCCACTGGCTGCGGCGGGA...TTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCTCAAGGGCGGAAGCCTaGGGCCTGCTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSSRAEA*GLLLVP
Trigger: GGGCACCAGCAGCAGGCCCCAGGCTTCCGCCCTTGA...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR CCA 90 bp AGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGACTGCGGTCGAGGAGCTaGTGTGTCCGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SWLPSAQGNVPLSSLYTGLRSRS*CVRVGL
Trigger: CAGCCCCACACGGACACACCAGCTCCTCGACCGCAG...TCCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp AGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGAGCACCAACAGCCCATTaGGCAGCCAGACCACTGGGG +
Preference number: 4 (lower is better)
Translates to: SWLPSAQGNVPLSSLYTGAPTAH*AARPLG
Trigger: CCCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGC...TCCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp ACTTCTTGCAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGCACCAACAGCCCATTaGGCAGCCAGACCACTGGGG +
Preference number: 4 (lower is better)
Translates to: TSCRETQAVAPVTQQVLEAPTAH*AARPLG
Trigger: CCCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGC...TTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTGCAAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp TGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGAGGCTTCTTTGCTGTaGGATGACCAGGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: CFGKSAARGFRPDSAGSREASLL*DDQGPG
Trigger: TCCCGGCCCCTGGTCATCTCACAGCAAAGAAGCCTC...CCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR GCA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTTGGGGGTCTGCAGGATaGTCAGTGGCACTGACTCTT +
Preference number: 4 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCWGSAG*SVALTL
Trigger: AAGAGTCAGTGCCACTGAGCATCCTGCAGACCCCCA...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCTTGATGAAGTGGGGCTaGAGCAGGACCGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: SGKAKLASVSTGKCTPLFLMKWG*SRTGTC
Trigger: GCAGGTCCCGGTCCTGCTGCAGCCCCACTTCATCAA...GAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp GCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGGATCCTTCAGAGATTTaGTTTTGTGGACAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: AFHREGTQQPQVELWRPEDPSEI*FCGQQC
Trigger: GCACTGCTGTCCACAAAAGCAAATCTCTGAAGGATC...CTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCAGAGGAAGACGAGCGTaGACAGGGCCAGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSRGRRA*TGPGGS
Trigger: GCTCCCGCCTGGCCCTGTGCACGCTCGTCTTCCTCT...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGCGGTGCCCAGCACGTTaGGCCCAGGGCTATGGTAGA +
Preference number: 4 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRRCPAR*AQGYGR
Trigger: TCTACCATAGCCCTGGGCGCAACGTGCTGGGCACCG...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp ACTGCCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAATCAGCCTGCTTGCGATaGCTCCAGAAGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: TAFGLQSFDAGQKLHGTKSACLR*LQKYTA
Trigger: CGCCGTGTACTTCTGGAGGCATCGCAAGCAGGCTGA...TTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCAGGTCCAGGTCAGCCTaGTTGCGATGCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CSPGKPSWLPSAQGNVPLRSRSA*LRCLQK
Trigger: CTTCTGGAGGCATCGCAAGCAGGCTGACCTGGACCT...GAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGTTGGTGGCAGTGAGGTaGCCGCCTGTGTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRLVAVR*PPVCFP
Trigger: GGGGAAGCACACAGGCGGGCACCTCACTGCCACCAA...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTGGTCTTCACTCTCAATaGAGCCGCCACATAGATCTC +
Preference number: 4 (lower is better)
Translates to: GTQQPQVELWRPESLALPGLHSQ*SRHIDL
Trigger: GAGATCTATGTGGCGGCTGCATTGAGAGTGAAGACC...AGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTTCAAAGCGTGTCAGAAAATaGAAGGCCCGTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: SRRSNCGGQSLLHCLRPSKRVRK*KARGRL
Trigger: CAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTT...TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGGCAGCCTTGAAGGAGTaGAGAGCTGCCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRAALKE*RAALGR
Trigger: CCTGCCCAGGGCAGCTCTGCACTCCTTCAAGGCTGC...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGGGCTGGACCAGACTCTaGCTTGGCACAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRGWTRL*LGTAQQ
Trigger: CTGCTGGGCTGTGCCAAGGCAGAGTCTGGTCCAGCC...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTCACACAGGAACAGCTaGACGGCCTTGTCAATGGAG +
Preference number: 4 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLSHRNS*TALSME
Trigger: CTCCATTGACAAGGCCGTGCAGCTGTTCCTGTGTGA...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp GACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGACGCAGGACAGAAGCTaGACGGGACCAAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: DLHYVHVSLPRRRERPLGTQDRS*TGPKWL
Trigger: TAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGT...CCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CTCCTGTCACACAACAGGTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGACGTGCCAGACTTCTTaGAGGGAGACCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LLSHNRSWKSVHPPVPPRTCQTS*RETQAV
Trigger: TACAGCTTGGGTCTCCCTGCAAGAAGTCTGGCACGT...CCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGACCTGTTGTGTGACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR CCA 90 bp AGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCACATCTTCAATGGAGTaGGTGCAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: STLTYTMYTSLSHDGERGTSSME*VQAGEG
Trigger: CCCCTCCCCAGCCTGCACCCACTCCATTGAAGATGT...GCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp CACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCGGGTACATCTTCAATaGAGTGGGTGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HADLHYVHVSLPRRRERPRVHLQ*SGCRLG
Trigger: CCCCAGCCTGCACCCACTCCATTGAAGATGTACCCG...AGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGGGGAGAAAGCGGGCATaGACGGGTACATCTTCAATG +
Preference number: 4 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLGRKRA*TGTSSM
Trigger: CATTGAAGATGTACCCGTCCATGCCCGCTTTCTCCC...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCGACAAGGGGCTGCTCTaGAAAGGTGAGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGDKGLL*KGEPAS
Trigger: GGATGCTGGCTCACCTTTCCAGAGCAGCCCCTTGTC...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTGTGTGCTTCCCCATaGTGTGCAGCTGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: STLTYTMYTSLSHDGERGLCASP*CAAGAA
Trigger: AGCTGCACCAGCTGCACACCATGGGGAAGCACACAG...GCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AGAAGCGTGTCAGAAAATGCAAGGCCCGTGGGAGACTGGTCTTCACTCTCAATGCAGCTGACCCAGGGCTaGGGTTGGGCTGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: RSVSENARPVGDWSSLSMQLTQG*GWAGSH
Trigger: GTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTG...CATTGAGAGTGAAGACCAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTCACAGATGGTCAGGCTaGCTGGACCAGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVAHRWSG*LDQTLP
Trigger: AGGCAGAGTCTGGTCCAGCCAGCCTGACCATCTGTG...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCAATGGAGCTGCTGGCTaGTGTGGTAGCCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGNGAAG*CGSQAV
Trigger: GACAGCCTGGCTACCACACCAGCCAGCAGCTCCATT...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCCCGCAGGTCGAACTGTaGAGGCCAGAGTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: CSPGKPSWLPSAQGNVPLPQVEL*RPESLA
Trigger: TGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGG...GAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CACAACAGGTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGGACCTTGTGTCACACAACAGGTCCTaGAAGTCAGTCCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: HNRSWKSVHPPVPPRDLVSHNRS*KSVHPP
Trigger: GGGAGGATGGACTGACTTCCAGGACCTGTTGTGTGA...CACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGACCTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578469.1
3UTR CAA 72 bp AATTCCTTGTCCCCATCAGCTGACCCAGGGCTGGGGTaGGGCTGGGTCACACAGTTCAGTGCTCGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: NSLSPSADPGLG*GWVTQFSARSK
Trigger: CTTAGAGCGAGCACTGAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp CCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACACTGAGTGGGGCCGTGTaGCTGGCTCACCGTAGACAA +
Preference number: 4 (lower is better)
Translates to: PSWLPSAQGNVPLSSLYTLSGAV*LAHRRQ
Trigger: TTGTCTACGGTGAGCCAGTCACACGGCCCCACTCAG...TGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp CGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGATGGGGGAGGTaGGACGTGCCAGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: RLFWKICSPWIPTRFSWEPGWGR*DVPDFL
Trigger: CAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGG...CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR GCA 90 bp CAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACACTATGAGGTGGAGACAAGCTaGCTGGGGAGCTGGTATCGG +
Preference number: 4 (lower is better)
Translates to: QSSTGASGQEAKHADLHYEVETS*LGSWYR
Trigger: CCGATACCAGCTCCCCAGGCAGCTTGTCTCCACCTC...ATAGTGTAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGTGAGGGCGCTGCCTaGGGCCCGCTCAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSAGEGAA*GPLRKA
Trigger: AGCCTTCCTGAGCGGGCCGCAGGCAGCGCCCTCACC...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCAGGGGACTGAGACCTaGCGCCTTCACAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLFWKICSPWIPTRFSWEQGTET*RLHSGS
Trigger: GGAGCCACTGTGAAGGCGGCAGGTCTCAGTCCCCTG...CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTTTTTGTGGACAGCAGTaGGCAGACTTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YTSLSHDGERGLWGRALLFCGQQ*ADLGSP
Trigger: AGGAGAACCTAAGTCTGCGCACTGCTGTCCACAAAA...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GCTAAGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGCAAGGGACAAGGGGCTaGTCTGGAAAGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AKHADLHYVHVSLPRRREQGTRG*SGKVSQ
Trigger: CTGGCTCACCTTTCCAGAGCAGCCCCTTGTCCCTTG...CTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp TCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCAAGGGACAAGGGGCTaGTCTGGAAAGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGKAKLASVSTGKCTPLFQGTRG*SGKVSQ
Trigger: CTGGCTCACCTTTCCAGAGCAGCCCCTTGTCCCTTG...GAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp CCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACATGCAGAGACGGCCGCTaGTCTGGCTTTGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PSWLPSAQGNVPLSSLYTCRDGR*SGFALL
Trigger: CAGCAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCA...TGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp CGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGAGGTGCCCGCCTGTGTaGTTCCCCATGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLFWKICSPWIPTRFSWERCPPV*FPMVCS
Trigger: GCTGCACACCATGGGGAAGCACACAGGCGGGCACCT...CTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CATCAGAACAGCTGTTCAGCAGCTGCAGGTACCCGAGGGCATCCGAGAATTCCTATCCCCTGCACACTCTaGCAGGTTCAGGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: HQNSCSAAAGTRGHPRIPIPCTL*QVQGTQ
Trigger: CTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGAT...AGGAATTCTCGGATGCCCTCGGGTACCTGCAGCTGCTGAACAGCTGTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp TCAGCCCACACACAAAGTCCACAGACTGAGTCACGCACGTGCAGTCATGTATCCGTAGCCAGGCTGTCCTaGAGGTACCCACTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SAHTQSPQTESRTCSHVSVARLS*RYPLAF
Trigger: GAAGGCCAGTGGGTACCTGCAGGACAGCCTGGCTAC...GGATACATGACTGCACGTGCGTGACTCAGTCTGTGGACTTTGTGTGTGGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp TCAGTGCTCGCTCTAAGAGATGTTCCCGGAATAGCTGAGTCACCTGGGCCAGGGGAGGCCAGAGTCTCTTaGACTGCCTTCGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SVLALRDVPGIAESPGPGEARVS*TAFGLQ
Trigger: TTGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTC...CCCTGGCCCAGGTGACTCAGCTATTCCGGGAACATCTCTTAGAGCGAGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCTGCCTGGGGAGCTaGTATCGGGGCTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGSCLGS*YRGWQG
Trigger: ACCCTGCCAGCCCCGATACCAGCTCCCCAGGCAGCT...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CATCTACGACCAGTGGGACTGTTGCCAAGATGGTTCCGCCACTCACCAGGGTCGCGCATCTACGACCAGTaGGACTGTTGCCAAGATGGT +
Preference number: 4 (lower is better)
Translates to: HLRPVGLLPRWFRHSPGSRIYDQ*DCCQDG
Trigger: ACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCG...CGACCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CCA 90 bp CCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCAGAGATTTGCTTTTGTaGACAGCAGTGCGCAGACTT +
Preference number: 4 (lower is better)
Translates to: PPEVSTIMAAGLRVKIAPRDLLL*TAVRRL
Trigger: AAGTCTGCGCACTGCTGTCCACAAAAGCAAATCTCT...GGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GACAAAGAGAAGCACCAAGGAGACGAGCACCAACAGCCCATTGAGCAGCCAGACGTGGGGCCGTGTGACTaGCTCACCGTAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: DKEKHQGDEHQQPIEQPDVGPCD*LTVDKE
Trigger: CTCTTTGTCTACGGTGAGCCAGTCACACGGCCCCAC...GTCTGGCTGCTCAATGGGCTGTTGGTGCTCGTCTCCTTGGTGCTTCTCTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTAGATGGTCAGGCTGGCTaGACCAGACTCTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KRQSSTGASGQEAKHADLDGQAG*TRLCLG
Trigger: GCCAAGGCAGAGTCTGGTCCAGCCAGCCTGACCATC...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp ACTTCTTGCAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGATGGTCAGGCTGGCTaGACCAGACTCTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TSCRETQAVAPVTQQVLEDGQAG*TRLCLG
Trigger: GCCAAGGCAGAGTCTGGTCCAGCCAGCCTGACCATC...TTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTGCAAGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AGAAGCGTGTCAGAAAATGCAAGGCCCGTGGGAGACTGGTCTTCACTCTCAATGCCATCAGCCGGGCCGTaGCCTCATGTAGGAACACCC +
Preference number: 4 (lower is better)
Translates to: RSVSENARPVGDWSSLSMPSAGP*PHVGTP
Trigger: GGGTGTTCCTACATGAGGCCACGGCCCGGCTGATGG...CATTGAGAGTGAAGACCAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp GCTAAGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGCCGCAGGTCGAACTGTaGAGGCCAGAGTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: AKHADLHYVHVSLPRRREPQVEL*RPESLA
Trigger: TGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGG...CTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCAGGTCAGCACCATCATaGCCGCCGGTCTTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SGKAKLASVSTGKCTPLFRSAPS*PPVLGS
Trigger: TGACCCTAAGACCGGCGGCCATGATGGTGCTGACCT...GAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCGGGAAAGCCAAGTTaGCTTCCGTCAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SGKAKLASVSTGKCTPLFPGKPS*LPSAQG
Trigger: TCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGG...GAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CACCACAAGAAGCAGGTCACACAGGAACAGCTGCACGGCCTTGTCAATGGAGCTCCGGGAAAGCCAAGTTaGCTTCCGTCAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: HHKKQVTQEQLHGLVNGAPGKPS*LPSAQG
Trigger: TCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGG...AGCTCCATTGACAAGGCCGTGCAGCTGTTCCTGTGTGACCTGCTTCTTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGCCCCCTCTCCAGTGTaGCGGCAGGTCGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSAAPSPV*RQVGRE
Trigger: CTCCCTCCCGACCTGCCGCCACACTGGAGAGGGGGC...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp GACAAAGAGAAGCACCAAGGAGACGAGCACCAACAGCCCATTGAGCAGCCAGACCTGTGGGACCCCACGTaGCTCCAGGCCTCAGTTATT +
Preference number: 4 (lower is better)
Translates to: DKEKHQGDEHQQPIEQPDLWDPT*LQASVI
Trigger: AATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAG...GTCTGGCTGCTCAATGGGCTGTTGGTGCTCGTCTCCTTGGTGCTTCTCTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGAGACGCTGCAGCAGGTaGCGGATGAGGTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTRRCSR*RMRFQR
Trigger: CCTCTGGAACCTCATCCGTCACCTGCTGCAGCGTCT...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR TCA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCTTCTTTGCTGTGAGATaGCCAGGGGCCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSFFAVR*PGAGMG
Trigger: CCCCATCCCGGCCCCTGGTCATCTCACAGCAAAGAA...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR TCA 90 bp GACTCTCCCTGTCACTCAGGCTCACTGCGGCCTCCAACTCCTGGGCTCAAGCTGCCCACTGATTCCTTGTaGAAGGAATTGTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: DSPCHSGSLRPPTPGLKLPTDSL*KELSSG
Trigger: ACCTGATGACAATTCCTTTCACAAGGAATCAGTGGG...CAGCTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCCTGAGTGACAGGGAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp AAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCCGCGCGTTCGTGTCCTaGCCTGGCCTCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KIQRLFWKICSPWIPTRFRAFVS*PGLRGG
Trigger: GCCGCCTCTGAGGCCAGGGCAGGACACGAACGCGCG...GAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp GGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTGTAGTCGATGGCCTTaGGCAAGACAGCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: GTQQPQVELWRPESLALPCSRWP*ARQQIY
Trigger: ATAAATCTGCTGTCTTGCGCAAGGCCATCGACTACA...AGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp CCGAGGGCATCCGAGAATTCCTTGTCCCCATCAGCTGACCCAGGGCTGGGGTTGAGACTTAGGTTCTCCTaGTTGAGTTTCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRASENSLSPSADPGLGLRLRFS*LSFWLL
Trigger: CAGCAACCAGAAACTCAAGCAGGAGAACCTAAGTCT...CAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATTCTCGGATGCCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp CATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCGCCAAGCTTCTCGAGTTTTGTGGACAGCAGTaGGCAGACTTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HEHLLTVVQQPAIAKLLEFCGQQ*ADLGSP
Trigger: AGGAGAACCTAAGTCTGCGCACTGCTGTCCACAAAA...CTCGAGAAGCTTGGCGATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp CAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACACTATTCAGCCTGCTTGCGATaGCTCCAGAAGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: QSSTGASGQEAKHADLHYSACLR*LQKYTA
Trigger: CGCCGTGTACTTCTGGAGGCATCGCAAGCAGGCTGA...ATAGTGTAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GGACCCCACGTGGCTCCAGGCCTCAGTTATTCTGTCTATGAAATGGGAGGTAGGCCAGGTCAGCCTGCTTaGGATGCCTCCAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: GPHVAPGLSYSVYEMGGRPGQPA*DASRST
Trigger: TGTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGG...CCTACCTCCCATTTCATAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp AGAACAGCTGTTCAGCAGCTGCAGGTACCCGAGGGCATCCGAGAATTCCTTGTCTGCTTCCCCATGGTGTaGAGCTGGTGCAGCTTATGG +
Preference number: 4 (lower is better)
Translates to: RTAVQQLQVPEGIREFLVCFPMV*SWCSLW
Trigger: CCATAAGCTGCACCAGCTGCACACCATGGGGAAGCA...GACAAGGAATTCTCGGATGCCCTCGGGTACCTGCAGCTGCTGAACAGCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR GCA 90 bp GCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTTCACACAGGAACAGCTaGACGGCCTTGTCAATGGAG +
Preference number: 4 (lower is better)
Translates to: AVRESQVGFRQHREMYPSSHRNS*TALSME
Trigger: CTCCATTGACAAGGCCGTGCAGCTGTTCCTGTGTGA...AGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGGCCGCCACAGGCTGGTaGGCACCACAAGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGAATGW*APQEAG
Trigger: ACCTGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGC...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR GCA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAAAAAGCCACTAAGGTaGCTGCAGAGCAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVAKKPLR*LQSKEG
Trigger: CCCCTCCTTGCTCTGCAGGCACCTTAGTGGCTTTTT...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCACCACACTCTGGACCTaGGTGTGCAAGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSTTLWT*VCKETG
Trigger: GCCCGTCTCCTTGCACACCCAGGTCCAGAGTGTGGT...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCGCATCTACGACCAGTaGGACTGTTGCCAAGATGGT +
Preference number: 4 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGRIYDQ*DCCQDG
Trigger: ACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCG...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCAGCGAATGTAGTCGATaGCCTTGCGCAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: STLTYTMYTSLSHDGERGSECSR*PCARQQ
Trigger: CTGCTGTCTTGCGCAAGGCCATCGACTACATTCGCT...GCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp ACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGATCCACGAAGAAACGGTaGCCCACGGGGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TIVLENLQPVDSDQIQLGSTKKR*PTGWQS
Trigger: GCTCTGCCACCCCGTGGGCCACCGTTTCTTCGTGGA...TCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACACACAGATGGTCAGGCTaGCTGGACCAGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PSWLPSAQGNVPLSSLYTHRWSG*LDQTLP
Trigger: AGGCAGAGTCTGGTCCAGCCAGCCTGACCATCTGTG...TGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp CAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACACTATAATGGAGCTGCTGGCTaGTGTGGTAGCCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QSSTGASGQEAKHADLHYNGAAG*CGSQAV
Trigger: GACAGCCTGGCTACCACACCAGCCAGCAGCTCCATT...ATAGTGTAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGGCTGCCGCCACAGGCTaGTGCGCACCACAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGAAATG*CAPQEA
Trigger: TGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGCAGC...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR CCA 90 bp ACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCTGCCGCCACAGGCTaGTGCGCACCACAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: TIVLENLQPVDSDQIQLGAAATG*CAPQEA
Trigger: TGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGCAGC...TCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR CCA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCCGACCAGATTCAGCTaGGAGCCGGGCCAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSPTRFS*EPGQAL
Trigger: TAAAGCCTGGCCCGGCTCCCAGCTGAATCTGGTCGG...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR TCA 90 bp ACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCAGCAGGTGACGGATaGGGTTCCAGAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: TIVLENLQPVDSDQIQLGAAGDG*GSRGGY
Trigger: GTAGCCTCCTCTGGAACCTCATCCGTCACCTGCTGC...TCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGTTGATGAAGTGGGGCTaGAGCAGGACCGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGLMKWG*SRTGTC
Trigger: GCAGGTCCCGGTCCTGCTGCAGCCCCACTTCATCAA...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGAGACTTAGGTTCTCCTaGTTGAGTTTCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLRLRFS*LSFWLL
Trigger: CAGCAACCAGAAACTCAAGCAGGAGAACCTAAGTCT...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCTTTTGTGGACAGCAGTaGGCAGACTTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FGKSAARGFRPDSAGSRAFCGQQ*ADLGSP
Trigger: AGGAGAACCTAAGTCTGCGCACTGCTGTCCACAAAA...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp ATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGCCACCGCTGCCACTaGCCCTGCTGCCAAGGGACA +
Preference number: 4 (lower is better)
Translates to: IQRLFWKICSPWIPTRFSCHRCH*PCCQGT
Trigger: TGTCCCTTGGCAGCAGGGGCAGTGGCAGCGGTGGCA...GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTAGCACCCGGGGCAGGTaGTCCACCAGCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: KDTTIVLENLQPVDSDQISTRGR*STSGHS
Trigger: GCTGTGCCCGCTGGTGGAGCACCTGCCCCGGGTGCT...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGTTTGCCACCGGGGCCTaGCCGCCGCCTCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: NKDTTIVLENLQPVDSDQFATGA*PPPQTA
Trigger: CGCAGTCTGAGGCGGCGGGCAGGCCCCGGTGGCAAA...CTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485080.6
ENST00000578469.1
CDS-3UTR GCA 90 bp ACTGCCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAACAGAGTCTCTTGCACTaGCTTCGGCCTTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: TAFGLQSFDAGQKLHGTKQSLLH*LRPSKL
Trigger: AAGCTTTGAAGGCCGAAGGCAGTGCAAGAGACTCTG...TTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGAACTGCGGTGGGGCTaGGGCTGGGAAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSAELRWG*GWEALW
Trigger: CCACAGAGCTTCCCAGCCCCAGCCCCACCGCAGTTC...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp GATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGGGAGCTGAACTGCGGTaGGGCTGGGGCTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DTTIVLENLQPVDSDQIQGAELR*GWGWEA
Trigger: AGCTTCCCAGCCCCAGCCCCACCGCAGTTCAGCTCC...CTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp ACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGATCTGCGAGGTCACAGTaGTCGTTACAGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TIVLENLQPVDSDQIQLGSARSQ*SLQGLP
Trigger: CGGCAGCCCCTGTAACGACCACTGTGACCTCGCAGA...TCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGGACAAGGGGCTGCTCTaGAAAGGTGAGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTDKGLL*KGEPAS
Trigger: GGATGCTGGCTCACCTTTCCAGAGCAGCCCCTTGTC...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGGTGGGGCCGTGTGACTaGCTCACCGTAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTVGPCD*LTVDKE
Trigger: CTCTTTGTCTACGGTGAGCCAGTCACACGGCCCCAC...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCTGTGTGCTTCCCCATaGTGTGCAGCTGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSLCASP*CAAGAA
Trigger: AGCTGCACCAGCTGCACACCATGGGGAAGCACACAG...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGCCAGGGGGTCCACTaGGTTCCCGGCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSAGQGVH*VPGQAV
Trigger: TACAGCTTGGCCGGGAACCCAGTGGACCCCCTGGCC...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CTGAGTCACGCACGTGCAGTCATGTATCCCACAAATGACAGTCACCCCACTGATCACAGATGGTCAGGCTaGCTGGACCAGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSHARAVMYPTNDSHPTDHRWSG*LDQTLP
Trigger: AGGCAGAGTCTGGTCCAGCCAGCCTGACCATCTGTG...ATCAGTGGGGTGACTGTCATTTGTGGGATACATGACTGCACGTGCGTGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp GTCACGCACGTGCAGTCATGTATCCCACAAATGACAGTCACCCCACTGATTCCTTGGCCTTCTCACAGATaGTCAGGCTGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: VTHVQSCIPQMTVTPLIPWPSHR*SGWLDQ
Trigger: CTGGTCCAGCCAGCCTGACCATCTGTGAGAAGGCCA...AGGAATCAGTGGGGTGACTGTCATTTGTGGGATACATGACTGCACGTGCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp AATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGGCCCCCTCTCCAGTGTaGCGGCAGGTCGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NKDTTIVLENLQPVDSDQAPSPV*RQVGRE
Trigger: CTCCCTCCCGACCTGCCGCCACACTGGAGAGGGGGC...CTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp TGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAGCTCTGTCCACGCTTCGATAATACAACGATTGTTTTaGAAAATCTGCAGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: CQSVRLSVRVLSSVHASIIQRLF*KICSPW
Trigger: CCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT...TATCGAAGCGTGGACAGAGCTGAGGACACGGACGGACAGGCGGACGGACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCATTCTGTCTATGAAATaGGAGGTAGGATCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPILSMK*EVGSVR
Trigger: CCTAACAGATCCTACCTCCCATTTCATAGACAGAAT...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR TCA 90 bp ACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCACTGACTCTTCCTTaGTACCAGGCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TIVLENLQPVDSDQIQLGALTLP*YQAQGR
Trigger: TCTCCCCTGGGCCTGGTATCAAGGAAGAGTCAGTGC...TCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACACACAGGGGTGGAGCTaGACTGCGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDTQGWS*TAVGLG
Trigger: CCCCAGCCCCACCGCAGTTCAGCTCCACCCCTGTGT...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAGACGCTGGTGGTATCTaGGGGGCTGGGAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRDAGGI*GAGKPP
Trigger: CGGGGGCTTCCCAGCCCCTCAGATACCACCAGCGTC...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp GATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCCGGGATGGGGGAGGTaGGACGTGCCAGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: DTTIVLENLQPVDSDQIQPGWGR*DVPDFL
Trigger: CAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGG...CTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR GCA 90 bp ATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCAGCCAGGGCCATCTCTaGTCTCGGTGCCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: IQRLFWKICSPWIPTRFSSQGHL*SRCPAR
Trigger: ACGTGCTGGGCACCGAGAGCAGAGATGGCCCTGGCT...GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCCAGGTCAGCCTGCTTaGGATGCCTCCAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTPGQPA*DASRST
Trigger: TGTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGG...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGGGCTGGACCAGACTCTaGCTTGGCACAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DTTIVLENLQPVDSDQIQGWTRL*LGTAQQ
Trigger: CTGCTGGGCTGTGCCAAGGCAGAGTCTGGTCCAGCC...CTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCGCCTCGCTGAAGGGTaGCTCGTCCATGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDRLAEG*LVHGAA
Trigger: GGCTGCGCCATGGACGAGCCACCCTTCAGCGAGGCG...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACACTCCGTCTGTCTTCATaGCTGTCAGAAGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: PSWLPSAQGNVPLSSLYTLRLSS*LSEAAS
Trigger: ACTCGCTGCTTCTGACAGCCATGAAGACAGACGGAG...TGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGGGACTGTTGCCAAGATaGTTCCGCCACTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGGLLPR*FRHSPG
Trigger: CCCTGGTGAGTGGCGGAACCATCTTGGCAACAGTCC...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACGCATCTACGACCAGTaGGACTGTTGCCAAGATGGT +
Preference number: 4 (lower is better)
Translates to: KRQSSTGASGQEAKHADLRIYDQ*DCCQDG
Trigger: ACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCG...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGGGTAGCGCTTCTCAATaGCGTTGTGGGCTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGGSASQ*RCGLCA
Trigger: AGCGCACAGCCCACAACGCCATTGAGAAGCGCTACC...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTATATGGTAGACGCTGGTaGTATCTGAGGGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KRQSSTGASGQEAKHADLYGRRW*YLRGWE
Trigger: TTCCCAGCCCCTCAGATACCACCAGCGTCTACCATA...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACAGCTGCTGGGCAGCCTaGGCAAAGTCTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDSCWAA*AKSPRA
Trigger: GGCCCGGGGAGACTTTGCCCAGGCTGCCCAGCAGCT...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp ATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCGGCAGAGCCACTGCATaGCAGGAGGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IQRLFWKICSPWIPTRFSGRATA*QEALSH
Trigger: GTGGCTCAGTGCCTCCTGCCATGCAGTGGCTCTGCC...GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAGAGAGGCCCACCACTTaGCCACCGGGTCTACGCCGG +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRERPTT*PPGLRR
Trigger: CCGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTC...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CACACACAAAGTCCACAGACTGAGTCACGCACGTGCAGTCATGTATCCCACAAAAATGGAGCTGCTGGCTaGTGTGGTAGCCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HTQSPQTESRTCSHVSHKNGAAG*CGSQAV
Trigger: GACAGCCTGGCTACCACACCAGCCAGCAGCTCCATT...TTTGTGGGATACATGACTGCACGTGCGTGACTCAGTCTGTGGACTTTGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp TGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGAAAATCTGCAGCCCGTaGATTCCGACCAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: CFGKSAARGFRPDSAGSRKICSP*IPTRFS
Trigger: GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTT...CCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp ACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGTCAGTCCATCCTCCAAAATCTGCAGCCCGTaGATTCCGACCAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: TQAVAPVTQQVLEVSPSSKICSP*IPTRFS
Trigger: GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTT...GGAGGATGGACTGACTTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR TCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTCTGAGTGGGGCCGTGTaGCTGGCTCACCGTAGACAA +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSALSGAV*LAHRRQ
Trigger: TTGTCTACGGTGAGCCAGTCACACGGCCCCACTCAG...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTATATTGCTTCACACTaGAGATTGTGTGTATCGAGC +
Preference number: 4 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLYIASH*RLCVSS
Trigger: GCTCGATACACACAATCTTCAGTGTGAAGCAATATA...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR GCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAGGTCGTTACAGGGGCTaGCGTGGGGGCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRGRYRG*RGGSCD
Trigger: GTCACAGCTGCCCCCACGGCAGCCCCTGTAACGACC...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAAGCATGCCCCGGCTGTaGAGAGACGGCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRSMPRL*RDGRCS
Trigger: AGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCT...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAATGGTAGACCAGGGCTaGGTCTCGGGCGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRMVDQG*VSGAGA
Trigger: AGCGCCAGCGCCCGAGACGCAGCCCTGGTCTACCAT...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CCTTGTGAAAGGAATTGTCATCAGGTAACCATCAAGAAGATGCTTGGTCTTTTTCGGAAGCCTGGGGCCTaGTGCTGGTGCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PCERNCHQVTIKKMLGLFRKPGA*CWCPGL
Trigger: CAGCCCAGGGCACCAGCAGCAGGCCCCAGGCTTCCG...AAAAAGACCAAGCATCTTCTTGATGGTTACCTGATGACAATTCCTTTCACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR GCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGAAAAAGCCACTAAGGTaGCTGCAGAGCAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTKKPLR*LQSKEG
Trigger: CCCCTCCTTGCTCTGCAGGCACCTTAGTGGCTTTTT...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp ACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGTCAGTCCATCCTCCTTGTTTTGGAAAATCTaGAGCCCGTGGATTCCGACC +
Preference number: 4 (lower is better)
Translates to: TQAVAPVTQQVLEVSPSSLFWKI*SPWIPT
Trigger: GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAA...GGAGGATGGACTGACTTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR CCA 90 bp GATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGTGGAGACAAGCTGCCTaGGGAGCTGGTATCGGGGCT +
Preference number: 4 (lower is better)
Translates to: DTTIVLENLQPVDSDQIQWRQAA*GAGIGA
Trigger: AGCCCCGATACCAGCTCCCCAGGCAGCTTGTCTCCA...CTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp ATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTCTGCCTTGATGAAGTaGGGCTGCAGCAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: IQRLFWKICSPWIPTRFSSALMK*GCSRTG
Trigger: CCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGA...GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CTCCAGGCCTCAGTTATTCTGTCTATGAAATGGGAGGTAGGATCTGTTAGGGTCTGGCCTTCTCACAGATaGTCAGGCTGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: LQASVILSMKWEVGSVRVWPSHR*SGWLDQ
Trigger: CTGGTCCAGCCAGCCTGACCATCTGTGAGAAGGCCA...GACCCTAACAGATCCTACCTCCCATTTCATAGACAGAATAACTGAGGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CCA 90 bp AAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCCCATCAGCCGGGCCGTaGCCTCATGTAGGAACACCC +
Preference number: 4 (lower is better)
Translates to: KIQRLFWKICSPWIPTRFPSAGP*PHVGTP
Trigger: GGGTGTTCCTACATGAGGCCACGGCCCGGCTGATGG...GAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CCA 90 bp AAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCCCTTTCCCTAGGTGCTaGGGGAGGGCCCAAGCACTC +
Preference number: 4 (lower is better)
Translates to: KIQRLFWKICSPWIPTRFPFPRC*GRAQAL
Trigger: GAGTGCTTGGGCCCTCCCCCAGCACCTAGGGAAAGG...GAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp GTAGCTCCTGTCACACAACAGGTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCATACAACGATTGTTTTaGAAAATCTGCAGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VAPVTQQVLEVSPSSRATIQRLF*KICSPW
Trigger: CCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT...GGTGGCACGGGAGGATGGACTGACTTCCAGGACCTGTTGTGTGACAGGAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR TCA 90 bp CTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTGGTTGTTGATAAGCTaGAGCATGTCTTCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LAVRESQVGFRQHREMYPWLLIS*SMSSKV
Trigger: CACTTTCGAAGACATGCTTCAGCTTATCAACAACCA...GGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp ATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCCTGTGTTCCCTCCACTaGCACAGGCCGACACCAGAT +
Preference number: 4 (lower is better)
Translates to: IQRLFWKICSPWIPTRFSLCSLH*HRPTPD
Trigger: ATCTGGTGTCGGCCTGTGGCAGTGGAGGGAACACAG...GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCCGGTGCCCAGCACGTTaGGCCCAGGGCTATGGTAGA +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTRCPAR*AQGYGR
Trigger: TCTACCATAGCCCTGGGCGCAACGTGCTGGGCACCG...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCATCTCTGCTCTCGGTaGCCAGCACGTTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KDTTIVLENLQPVDSDQIHLCSR*PARCAQ
Trigger: CTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGATG...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGGCCGCCACAGGCTGGTaGGCACCACAAGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: NKDTTIVLENLQPVDSDQAATGW*APQEAG
Trigger: ACCTGCTTCTTGTGGTGCGCACCAGCCTGTGGCGGC...CTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR CCA 90 bp ATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCCTGCCGCCTTCACAGTaGCTCCGTCTGTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: IQRLFWKICSPWIPTRFSLPPSQ*LRLSSW
Trigger: CCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAG...GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGTACAGGCTCTCCCATaGGGTACTGAGCACGGACCA +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSAVQALP*GTEHGP
Trigger: TGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTAC...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp CCTTGTGAAAGGAATTGTCATCAGGTAACCATCAAGAAGATGCTTGGTCTTTTTTCAAGGGCGGAAGCCTaGGGCCTGCTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PCERNCHQVTIKKMLGLFSRAEA*GLLLVP
Trigger: GGGCACCAGCAGCAGGCCCCAGGCTTCCGCCCTTGA...AAAAAGACCAAGCATCTTCTTGATGGTTACCTGATGACAATTCCTTTCACAAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGTCACACAACAGGTCCTaGAAGTCAGTCCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGSHNRS*KSVHPP
Trigger: GGGAGGATGGACTGACTTCCAGGACCTGTTGTGTGA...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000578469.1
CDS-3UTR TCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAAGACGCTGCAGCAGGTaGCGGATGAGGTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRRRCSR*RMRFQR
Trigger: CCTCTGGAACCTCATCCGTCACCTGCTGCAGCGTCT...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCTCTCCCATGGGGTACTaGGCACGGACCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTSPMGY*ARTSPH
Trigger: ATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGA...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTTGGCCATGCTGGAACTaGTGGAGAAGCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSAWPCWN*WRSCRQ
Trigger: CTGCCTACAGCTTCTCCATCAGTTCCAGCATGGCCA...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR TCA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTTTCTTTGCTGTGAGATaGCCAGGGGCCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: KDTTIVLENLQPVDSDQIFFAVR*PGAGMG
Trigger: CCCCATCCCGGCCCCTGGTCATCTCACAGCAAAGAA...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR GCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGACCAGTGGGACTGTTaGCAAGATGGTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSADQWDC*QDGSAT
Trigger: AGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTC...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGAGATTTATTCAGCTTTaGCTCAGTGCCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTRFIQL*LSAHHQ
Trigger: CTGGTGGTGGGCACTGAGGCAAAGCTGAATAAATCT...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR GCA 90 bp AAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCCAAGGGACAAGGGGCTaGTCTGGAAAGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KIQRLFWKICSPWIPTRFQGTRG*SGKVSQ
Trigger: CTGGCTCACCTTTCCAGAGCAGCCCCTTGTCCCTTG...GAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTAGGCCTGGCGGGCACTaGTCAGGAAGAAGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: KDTTIVLENLQPVDSDQIRPGGH*SGRSVS
Trigger: TGACACGCTTCTTCCTGAGCAGTGCCCGCCAGGCCT...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTAAGCCTTTCCCTAGGTaGTGGGGGAGGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KDTTIVLENLQPVDSDQIKPFPR*WGRAQA
Trigger: TGCTTGGGCCCTCCCCCAGCACCTAGGGAAAGGCTT...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp AATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAGGACCGGGACCTGCTaGATCTGCGAGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: NKDTTIVLENLQPVDSDQRTGTC*ICEVTV
Trigger: CACTGTGACCTCGCAGATCCAGCAGGTCCCGGTCCT...CTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGAGAGATTTGCTTTTGTaGACAGCAGTGCGCAGACTT +
Preference number: 4 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRRDLLL*TAVRRL
Trigger: AAGTCTGCGCACTGCTGTCCACAAAAGCAAATCTCT...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACTCCCGCCGCAGCCAGTaGATCACCACAGCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDSRRSQ*ITTAVR
Trigger: TCTGACAGCTGTGGTGATCCACTGGCTGCGGCGGGA...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCCTGCTCAGGTCCCGTTaGAAGCCACGCAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTLLRSR*KPRSSR
Trigger: CCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR CCA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCTGCTCAGGTCCCGTTaGAAGCCACGCAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KDTTIVLENLQPVDSDQILLRSR*KPRSSR
Trigger: CCTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAG...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR GCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAGTGACTGTCAGTAGCTaGTGGGGGACCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRVTVSS*WGTTLW
Trigger: CCAGAGTGTGGTCCCCCAGCAGCTACTGACAGTCAC...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCGGGACCTGCTGGATCTaGGAGGTCACAGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTGTCWI*EVTVVV
Trigger: AACGACCACTGTGACCTCGCAGATCCAGCAGGTCCC...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGAGACTTAGGTTCTCCTaGTTGAGTTTCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTRLRFS*LSFWLL
Trigger: CAGCAACCAGAAACTCAAGCAGGAGAACCTAAGTCT...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR GCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACATCCCCTGCACACTCTaGCAGGTTCAGGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDIPCTL*QVQGTQ
Trigger: CTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGAT...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp CCTTGTGAAAGGAATTGTCATCAGGTAACCATCAAGAAGATGCTTGGTCTTTTTCTAGGTGTGAGCCACTaGGCCAGGCCTGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PCERNCHQVTIKKMLGLFLGVSH*ARPVCP
Trigger: GGGACAGACAGGCCTGGCGCAGTGGCTCACACCTAG...AAAAAGACCAAGCATCTTCTTGATGGTTACCTGATGACAATTCCTTTCACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CCA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTACTGTCAGTAGCTGCTaGGGGACCACACTCTGGACC +
Preference number: 4 (lower is better)
Translates to: KDTTIVLENLQPVDSDQITVSSC*GTTLWT
Trigger: GGTCCAGAGTGTGGTCCCCCAGCAGCTACTGACAGT...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTCTCCGTCTGTCTTCATaGCTGTCAGAAGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSALRLSS*LSEAAS
Trigger: ACTCGCTGCTTCTGACAGCCATGAAGACAGACGGAG...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACGGCTATGGTAGACGCTaGTGGTATCTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDGYGRR*WYLRGW
Trigger: CCAGCCCCTCAGATACCACCAGCGTCTACCATAGCC...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCCACAGATGGTCAGGCTaGCTGGACCAGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTHRWSG*LDQTLP
Trigger: AGGCAGAGTCTGGTCCAGCCAGCCTGACCATCTGTG...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACGCTCTGGCTTTGCCTTaGTGTCCTCAAAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDALALP*CPQRLG
Trigger: GCCCAGTCTTTGAGGACAGCAAGGCAAAGCCAGAGC...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCCCGCTGCTCTGGCTTTaGCTTGCTGTCCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTPLLWL*LAVLKD
Trigger: GTCTTTGAGGACAGCAAGGCAAAGCCAGAGCAGCGG...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCCCAGGTCAGCCTGCTTaGGATGCCTCCAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTPGQPA*DASRST
Trigger: TGTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGG...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp GATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGGGTCTTCACTCTCAATaGAGCCGCCACATAGATCTC +
Preference number: 4 (lower is better)
Translates to: DTTIVLENLQPVDSDQIQGLHSQ*SRHIDL
Trigger: GAGATCTATGTGGCGGCTGCATTGAGAGTGAAGACC...CTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCACGTGCCAGACTTCTTaGAGGGAGACCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: KIQRLFWKICSPWIPTRFTCQTS*RETQAV
Trigger: TACAGCTTGGGTCTCCCTGCAAGAAGTCTGGCACGT...GAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp AATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAGGCCCGTGGGAGACTaGTCTTCACTCTCAATGCAG +
Preference number: 4 (lower is better)
Translates to: NKDTTIVLENLQPVDSDQRPVGD*SSLSMQ
Trigger: CTGCATTGAGAGTGAAGACCAGTCTCCCACGGGCCT...CTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTAAAATCTGCAGCCCGTaGATTCCGACCAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: YNDCFGKSAARGFRPDSAKICSP*IPTRFS
Trigger: GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTT...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp CCTTGTGAAAGGAATTGTCATCAGGTAACCATCAAGAAGATGCTTGGTCTTTTTCAGACAGCACATCCCTaGTCAGCAGCTGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PCERNCHQVTIKKMLGLFQTAHP*SAAAPS
Trigger: TGAGGGGGCAGCTGCTGACCAGGGATGTGCTGTCTG...AAAAAGACCAAGCATCTTCTTGATGGTTACCTGATGACAATTCCTTTCACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR TCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCGATGCTCAGTGGCACTaGCTCTTCCTTGATACCAGG +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTDAQWH*LFLDTR
Trigger: CCTGGTATCAAGGAAGAGTCAGTGCCACTGAGCATC...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAAGCGTGTCAGAAAATaGAAGGCCCGTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTKRVRK*KARGRL
Trigger: CAGTCTCCCACGGGCCTTGCATTTTCTGACACGCTT...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGACGTGCCAGACTTCTTaGAGGGAGACCCAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: NKDTTIVLENLQPVDSDQTCQTS*RETQAV
Trigger: TACAGCTTGGGTCTCCCTGCAAGAAGTCTGGCACGT...CTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR GCA 90 bp GATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGTTGTTTTGGAAAATCTaGAGCCCGTGGATTCCGACC +
Preference number: 4 (lower is better)
Translates to: DTTIVLENLQPVDSDQIQLFWKI*SPWIPT
Trigger: GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAA...CTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCTTCTCAATGGCGTTGTaGGCTGTGCGCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTFSMAL*AVRFSP
Trigger: TGGAGAGAAGCGCACAGCCCACAACGCCATTGAGAA...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATATGGTAGACGCTGGTaGTATCTGAGGGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRYGRRW*YLRGWE
Trigger: TTCCCAGCCCCTCAGATACCACCAGCGTCTACCATA...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp ATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGAAGATTTATTCAGCTTTaGCTCAGTGCCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: IKIQRLFWKICSPWIPTRRFIQL*LSAHHQ
Trigger: CTGGTGGTGGGCACTGAGGCAAAGCTGAATAAATCT...TCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp AAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCGATCCTTCAGAGATTTaGTTTTGTGGACAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: KIQRLFWKICSPWIPTRFDPSEI*FCGQQC
Trigger: GCACTGCTGTCCACAAAAGCAAATCTCTGAAGGATC...GAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR GCA 90 bp GTTAAGACGACTAGTGTTCTTATTAGTATATTGCTTCACACTGAAGATTGTGTGGGGAGGAGGCTTCTTTaGTGTGAGATGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VKTTSVLISILLHTEDCVGRRLL*CEMTRG
Trigger: GCCCCTGGTCATCTCACAGCAAAGAAGCCTCCTCCC...CACACAATCTTCAGTGTGAAGCAATATACTAATAAGAACACTAGTCGTCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR GCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACTTGTTTTGGAAAATCTaGAGCCCGTGGATTCCGACC +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDLFWKI*SPWIPT
Trigger: GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAA...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACAGAGATTTGCTTTTGTaGACAGCAGTGCGCAGACTT +
Preference number: 4 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDRDLLL*TAVRRL
Trigger: AAGTCTGCGCACTGCTGTCCACAAAAGCAAATCTCT...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CCA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCATACAACGATTGTTTTaGAAAATCTGCAGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTIQRLF*KICSPW
Trigger: CCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CCA 90 bp AAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCCGTGTGTATTATATCTaGCCTCGTTATATAGTGTAT +
Preference number: 4 (lower is better)
Translates to: KIQRLFWKICSPWIPTRFRVYYI*PRYIVY
Trigger: ATACACTATATAACGAGGCCAGATATAATACACACG...GAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485080.6
3UTR CAA 72 bp GTAAATGTTAAGACGACTAGTGTTCTTATTAGTATATaGCTTCACACTGAAGATTGTGTGTATCGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VNVKTTSVLISI*LHTEDCVYRAV
Trigger: AACAGCTCGATACACACAATCTTCAGTGTGAAGCAATATACTAATAAGAACACTAGTCGTCTTAACATTTAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS TCA 90 bp CCAGATCGCACGGCTCGCCCAGCGCCTGCTCCAAAGCCGCCTCGCTaGAGGGTGGCTCGTCCATGGCGCAGCCGCCTCCTCCGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PDRTARPAPAPKPPR*RVARPWRSRLLREA
Trigger: GGCCTCCCGGAGGAGGCGGCTGCGCCATGGACGAGCCACCCTTCAGCGAGGCGGCTTTGGAGCAGGCGCTGGGCGAGCCGTGCGATCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
CDS CCA 90 bp CTGGGTGTGCAAGGAGACGGGCGGGACCCCTGGCGGGGAAGCCAGTaGCAGGCCAGGCAGCGGCTGCTGGGTGTTCCCGGGAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LGVQGDGRDPWRGSQ*QARQRLLGVPGRAS
Trigger: GGAAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCAGGGGTCCCGCCCGTCTCCTTGCACACCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000662439.1
CDS GCA 90 bp GGCGGGACCCCTGGCGGGGAAGCCAGTGGCAGGCCAGGCAGCGGCTaGTGGGTGTTCCCGGGAGGGCTTCCTGTAGAGAAGCCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: GGTPGGEASGRPGSG*WVFPGGLPVEKPPG
Trigger: TCCGGGAGGCTTCTCTACAGGAAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCAGGGGTCCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
ENST00000423161.3
CDS CCA 90 bp GGGACCCCTGGCGGGGAAGCCAGTGGCAGGCCAGGCAGCGGCTGCTaGGTGTTCCCGGGAGGGCTTCCTGTAGAGAAGCCTCCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: GTPGGEASGRPGSGC*VFPGGLPVEKPPGG
Trigger: CCCTCCGGGAGGCTTCTCTACAGGAAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCAGGGGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
ENST00000423161.3
CDS-3UTR CAA 90 bp TCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTGCAGAGGCCGGGGCCTaGCTGCCAGCTGCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: SRSRPSGLPPRRHTAAAGAEAGA*LPAASR
Trigger: CCGGCTCGCAGCTGGCAGCAAGGCCCCGGCCTCTGC...ACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp CACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCACATCCATCAGCTCCTTaGCCACCGGGGCCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: HRPGPVPASPSACPSVSSHPSAP*PPGPAR
Trigger: GCGGGCAGGCCCCGGTGGCAAAGGAGCTGATGGATG...TGAGGACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS-3UTR CAA 90 bp CACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCACTACCGCGACGCCACTaGTCCACGCAGCCACCACCG +
Preference number: 5 (lower is better)
Translates to: HRPGPVPASPSACPSVSSLPRRH*STQPPP
Trigger: CGGTGGTGGCTGCGTGGACAAGTGGCGTCGCGGTAG...TGAGGACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS GCA 90 bp AACCTGCCGTGCACTCACTCAGACTCCTGCAGCACCCGGGGCAGGTaGTCCACCAGCGGGCACAGCCGCTCAGCCGCCTCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: NLPCTHSDSCSTRGR*STSGHSRSAASSSR
Trigger: GCGGGATGAGGAGGCGGCTGAGCGGCTGTGCCCGCTGGTGGAGCACCTGCCCCGGGTGCTGCAGGAGTCTGAGTGAGTGCACGGCAGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS CCA 90 bp GACCACACTCTGGACCTGGGTGTGCAAGGAGACGGGCGGGACCCCTaGCGGGGAAGCCAGTGGCAGGCCAGGCAGCGGCTGCTGGGTGTT +
Preference number: 5 (lower is better)
Translates to: DHTLDLGVQGDGRDP*RGSQWQARQRLLGV
Trigger: AACACCCAGCAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCAGGGGTCCCGCCCGTCTCCTTGCACACCCAGGTCCAGAGTGTGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000662439.1
CDS CCA 90 bp AGCCTGGGGGCTCACCCCGAGTGTCCCTCCCAAAGATGCCCAGGCTaGCCGGTCCCACCTCTGCTCTCGGTGCCCAGCACGTTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: SLGAHPECPSQRCPG*PVPPLLSVPSTLRP
Trigger: TGGGCGCAACGTGCTGGGCACCGAGAGCAGAGGTGGGACCGGCCAGCCTGGGCATCTTTGGGAGGGACACTCGGGGTGAGCCCCCAGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580540.1
CDS-3UTR CAA 90 bp CACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAGCTGCTCAGGTCCCGTaGGAAGCCACGCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: HRPGPVPASPSACPSVSSAAQVP*EATQLK
Trigger: CTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAGC...TGAGGACACGGACGGACAGGCGGACGGACTGGCAGGGACTGGCCCGGGCCGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS GCA 90 bp AGAGGAAGACGAGCGTGCACAGGGCCAGGCGGGAGCGGTCCAGCATaGCCCGGCTGTGCAGAGACGGCCGCTGCTCTGGCTTTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: RGRRACTGPGGSGPA*PGCAETAAALALPC
Trigger: GCAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCCCGCCTGGCCCTGTGCACGCTCGTCTTCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
ENST00000580540.1
ENST00000662439.1
CDS GCA 90 bp GGCGGGACCCCTGGCGGGGAAGCCAGTGGCAGGCCAGGCAGCGGCTaGTGGGTGTTCCCGGGAGGGCTTCCTGCAGAAATAAAGCATGGG +
Preference number: 5 (lower is better)
Translates to: GGTPGGEASGRPGSG*WVFPGGLPAEIKHG
Trigger: CCCATGCTTTATTTCTGCAGGAAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCAGGGGTCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 90 bp AGAGGAAGACGAGCGTGCACAGGGCCAGGCGGGAGCGGTCCAGCATaGCCCGGCTGTGCAGAGACGGCCGCTGCTCTGGCTTTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RGRRACTGPGGSGPA*PGCAETAAALALPG
Trigger: ACCAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTGGACCGCTCCCGCCTGGCCCTGTGCACGCTCGTCTTCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471445.5
CDS GCA 90 bp GCCCAGGCTGGCCGGTCCCACCTCTGCTCTCGGTGCCCAGCACGTTaGGCCCAGGGCTATGGTAGACGCTGGTGGTATCTGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AQAGRSHLCSRCPAR*AQGYGRRWWYLRGW
Trigger: CCAGCCCCTCAGATACCACCAGCGTCTACCATAGCCCTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGGTGGGACCGGCCAGCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580540.1
CDS CCA 90 bp GTCTTCGAAAGTGCAATCCATGGCTCCGCGATCTGCGCCCGCCCTTaGGGCGTCCAGGCCGTTGGCCCTACCCCTCCCCGCGCCGACTTC +
Preference number: 5 (lower is better)
Translates to: VFESAIHGSAICARP*GVQAVGPTPPRADF
Trigger: GAAGTCGGCGCGGGGAGGGGTAGGGCCAACGGCCTGGACGCCCCAAGGGCGGGCGCAGATCGCGGAGCCATGGATTGCACTTTCGAAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000423161.3
CDS-3UTR CAA 90 bp AGCCACAGCTGCTGGGCAGCCTGGGCAAAGTCTCCCCGGGCCAGGTCCAGGTCAAGGGCCCGGGCAGCCTaGAAGGAGTGCAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHSCWAAWAKSPRARSRSRARAA*KECRAA
Trigger: GGCAGCTCTGCACTCCTTCAAGGCTGCCCGGGCCCT...TGACCTGGACCTGGCCCGGGGAGACTTTGCCCAGGCTGCCCAGCAGCTGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS GCA 90 bp CCGAGTGTCCCTCCCAAAGATGCCCAGGCTGGCCGGTCCCACCTCTaGTCTCGGTGCCCAGCACGTTGCGCCCAGGGCTATGGTAGACGC +
Preference number: 5 (lower is better)
Translates to: PSVPPKDAQAGRSHL*SRCPARCAQGYGRR
Trigger: GCGTCTACCATAGCCCTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGGTGGGACCGGCCAGCCTGGGCATCTTTGGGAGGGACACTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580540.1
CDS-3UTR CAA 90 bp ATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACGCCGCTGCTCTGGCTTaGCCTTACTGTGGGACCCCA +
Preference number: 5 (lower is better)
Translates to: IAPLGPSTAKAHSSRRSNAAALA*PYCGTP
Trigger: TGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGC...GTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS GCA 90 bp AAGTTCACAAGCCTGGGGGCTCACCCCGAGTGTCCCTCCCAAAGATaGCCAGGCTGGCCGGTCCCACCTCTGCTCTCGGTGCCCAGCACG +
Preference number: 5 (lower is better)
Translates to: KFTSLGAHPECPSQR*PGWPVPPLLSVPST
Trigger: CGTGCTGGGCACCGAGAGCAGAGGTGGGACCGGCCAGCCTGGGCATCTTTGGGAGGGACACTCGGGGTGAGCCCCCAGGCTTGTGAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580540.1
CDS CCA 90 bp CACATCCCATGTGCGCCCTTCCCTGCTGAGCAGACAGCACATCCCTaGTCAGCAGCTGCCCCCTCACCTCCTTTGCCACCGGGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: HIPCAPFPAEQTAHP*SAAAPSPPLPPGPA
Trigger: GGCAGGCCCCGGTGGCAAAGGAGGTGAGGGGGCAGCTGCTGACCAGGGATGTGCTGTCTGCTCAGCAGGGAAGGGCGCACATGGGATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CAA 90 bp TTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCGCAGAGGCCGGGGCCTaGCTGCCAGCTGCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: FGKSAARGFRPDSAGSRAAEAGA*LPAASR
Trigger: CCGGCTCGCAGCTGGCAGCAAGGCCCCGGCCTCTGC...GGCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp CTGCCGCCTTCACAGTGGCTCCGTCTGTCTTCATGGCTGTCAGAAGCAGCGAGTGCAGAGGCCGGGGCCTaGCTGCCAGCTGCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LPPSQWLRLSSWLSEAASAEAGA*LPAASR
Trigger: CCGGCTCGCAGCTGGCAGCAAGGCCCCGGCCTCTGC...ACTCGCTGCTTCTGACAGCCATGAAGACAGACGGAGCCACTGTGAAGGCGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CAA 90 bp GCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGACAGGGGTGGATCTGCGCCCGCCCTaGGGGCGTCCAGGCCGTTGG +
Preference number: 5 (lower is better)
Translates to: ASTQDRSCTGPKWLETGVDLRPP*GRPGRW
Trigger: CCAACGGCCTGGACGCCCCAAGGGCGGGCGCAGATC...CACCCCTGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS TCA 90 bp GCTGCCCTGGGCAGGGGTCTCCGGTGGTGGTGGCCATGCTGGAACTaGTGGAGAAGCTGTAGGCAGGAGCCCCCGCAGCATCAGAACAGC +
Preference number: 5 (lower is better)
Translates to: AALGRGLRWWWPCWN*WRSCRQEPPQHQNS
Trigger: GCTGTTCTGATGCTGCGGGGGCTCCTGCCTACAGCTTCTCCATCAGTTCCAGCATGGCCACCACCACCGGAGACCCCTGCCCAGGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447641.5
CDS CCA 90 bp GCCGCAGCCAGTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTaGCCACCGGGTCTACGCCTGCAGAAGAGGGAGGGTCCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: AAASGSPQLSERPTT*PPGLRLQKREGPLN
Trigger: GTTCAGGGGACCCTCCCTCTTCTGCAGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACTGGCTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS-3UTR CAA 90 bp GCCGGTCTTAGGGTCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCACCAACAGCCCATaGAGCAGCCAGACCACTGGG +
Preference number: 5 (lower is better)
Translates to: AGLRVKIAPLGPSTAKAHSTNSP*SSQTTG
Trigger: CCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGCT...GTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGACCCTAAGACCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp GTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTGGCCACCGGGTCTACGCCGACCCAGGGCTGGGGTaGGGCTGGGTCACACAGTTC +
Preference number: 5 (lower is better)
Translates to: VDHHSCQRGPPLGHRVYADPGLG*GWVTQF
Trigger: GAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTC...GGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CAA 90 bp AGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTTCGGCCTAGAGAGGCCCACCACTaGGCCACCGGGTCTACGCCG +
Preference number: 5 (lower is better)
Translates to: SSRRSNCGGQSLLHCLRPREAHH*ATGSTP
Trigger: CGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCT...AGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS TCA 90 bp CACCTGGGTTCCCGGCCAAGCTGTACAGGCTCTCCCATGGGGTACTaGGCACGGACCAGTCCCCATCCACGAAGAAACGGTGGCCCACGG +
Preference number: 5 (lower is better)
Translates to: HLGSRPSCTGSPMGY*ARTSPHPRRNGGPR
Trigger: CCGTGGGCCACCGTTTCTTCGTGGATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTACAGCTTGGCCGGGAACCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584760.1
CDS GCA 90 bp AAGCTGAAGCATGTCTTCGAAAGTGCAATCCATGGCTCCGCGATCTaGGCCCGCCCTTGGGGCGTCCAGGCCGTTGGCCCTACCCCTCCC +
Preference number: 5 (lower is better)
Translates to: KLKHVFESAIHGSAI*ARPWGVQAVGPTPP
Trigger: GGGAGGGGTAGGGCCAACGGCCTGGACGCCCCAAGGGCGGGCGCAGATCGCGGAGCCATGGATTGCACTTTCGAAGACATGCTTCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355815.8
ENST00000423161.3
ENST00000476994.1
ENST00000583732.1
CDS GCA 90 bp TGGCAGGCCAGGCAGCGGCTGCTGGGTGTTCCCGGGAGGGCTTCCTaGAGAAATAAAGCATGGGGCTGCAGACACAGACCTCCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: WQARQRLLGVPGRAS*RNKAWGCRHRPPSP
Trigger: GGGAGAGGGAGGTCTGTGTCTGCAGCCCCATGCTTTATTTCTGCAGGAAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS CCA 90 bp TTCAAGAGAGGAGCTCAATGTGGCAGGAGGTGGAGACAAGCTGCCTaGGGAGCTGGTATCGGGGCTGGCAGGGTCTGTGCCCCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: FKRGAQCGRRWRQAA*GAGIGAGRVCAPCP
Trigger: GGGGCAGGGGGCACAGACCCTGCCAGCCCCGATACCAGCTCCCCAGGCAGCTTGTCTCCACCTCCTGCCACATTGAGCTCCTCTCTTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000476994.1
ENST00000577897.2
CDS-3UTR CAA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCTGCCACCCAGGGACCTaGTGGCCGGAGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGCHPGT*WPEGEG
Trigger: CCCCTCCCCCTCCGGCCACAAGGTCCCTGGGTGGCA...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000578469.1
CDS-3UTR CAA 90 bp CCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAGCTCTGTCCACGCTTCGAGGAGAAAGGAAGCCTTaGCCGGGTAAGGGGCTACCG +
Preference number: 5 (lower is better)
Translates to: PASPSACPSVSSALSTLRGERKP*PGKGLP
Trigger: CGGTAGCCCCTTACCCGGCAAAGGCTTCCTTTCTCC...TCGAAGCGTGGACAGAGCTGAGGACACGGACGGACAGGCGGACGGACTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS CCA 90 bp CCCGCTCAGGAAGGCTTCAAGAGAGGAGCTCAATGTGGCAGGAGGTaGAGACAAGCTGCCTGGGGAGCTGGTATCGGGGCTGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PAQEGFKRGAQCGRR*RQAAWGAGIGAGRV
Trigger: GACCCTGCCAGCCCCGATACCAGCTCCCCAGGCAGCTTGTCTCCACCTCCTGCCACATTGAGCTCCTCTCTTGAAGCCTTCCTGAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000476994.1
ENST00000577897.2
CDS CCA 90 bp GGCTTCCTATGGACAGTCCCTGCCTGGGCTCTGATGCAAATGCACTaGCTTCAAGCCAGGCCTCCAGTGCGAGGTTGCGCCTACCCCGGC +
Preference number: 5 (lower is better)
Translates to: GFLWTVPAWALMQMH*LQARPPVRGCAYPG
Trigger: GCCGGGGTAGGCGCAACCTCGCACTGGAGGCCTGGCTTGAAGCCAGTGCATTTGCATCAGAGCCCAGGCAGGGACTGTCCATAGGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS-3UTR CAA 90 bp CACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGCGCCCCCGACCAGTGGGACTGTaGCCAAGATGGTTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: HQRSAPSWPPVLGSRSRPRPVGL*PRWFRH
Trigger: GTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCG...GGGGCGCGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp TCTCGGCCAGCGTCGCCACAGACACGGCATCCCCTGCACACTCTGCCAGGTTCAAGCACCAACAGCCCATaGAGCAGCCAGACCACTGGG +
Preference number: 5 (lower is better)
Translates to: SRPASPQTRHPLHTLPGSSTNSP*SSQTTG
Trigger: CCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGCT...TGAACCTGGCAGAGTGTGCAGGGGATGCCGTGTCTGTGGCGACGCTGGCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CAA 90 bp ACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCGACCCAGGGCTGGGGTaGGGCTGGGTCACACAGTTC +
Preference number: 5 (lower is better)
Translates to: TMYTSLSHDGERGLWGRADPGLG*GWVTQF
Trigger: GAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTC...GGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTAGAGAGGCCCACCACTaGGCCACCGGGTCTACGCCG +
Preference number: 5 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCREAHH*ATGSTP
Trigger: CGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCT...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp GCCTTCTCACAGATGGTCAGGCTGGCTGGACCAGACTCTGCCTTGGCACAGCCCGCTGCTCAGGTCCCGTaGGAAGCCACGCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: AFSQMVRLAGPDSALAQPAAQVP*EATQLK
Trigger: CTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAGC...GGGCTGTGCCAAGGCAGAGTCTGGTCCAGCCAGCCTGACCATCTGTGAGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CAA 90 bp CTCTCAATGCAGCCGCCACATAGATCTCGGCCAGCGTCGCCACAGACACGGCATGGGGCAGAGCCCTGCTaGCAGTCCGGGAAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: LSMQPPHRSRPASPQTRHGAEPC*QSGKAK
Trigger: CTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCC...ATGCCGTGTCTGTGGCGACGCTGGCCGAGATCTATGTGGCGGCTGCATTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CAA 90 bp GTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGGACCTTGTGGCCGGAGGGGGCCAGGCTTTAGGTaGGGGAATGGGAATGAAGGG +
Preference number: 5 (lower is better)
Translates to: VLEVSPSSRATQGPCGRRGPGFR*GNGNEG
Trigger: CCCTTCATTCCCATTCCCCAACCTAAAGCCTGGCCC...CCTCCGGCCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS GCA 90 bp AATGTAAGATGCAGACAGCAGGGTCTGGCTAGCTGCTGCTGTGCCTaGCGCCATCTCAGGGAGGCCTTCCCTGGCTACCACCAGGGGACC +
Preference number: 5 (lower is better)
Translates to: NVRCRQQGLASCCCA*RHLREAFPGYHQGT
Trigger: GGTCCCCTGGTGGTAGCCAGGGAAGGCCTCCCTGAGATGGCGGCAGGCACAGCAGCAGCTAGCCAGACCCTGCTGTCTGCATCTTACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CCA 90 bp CCCCGGCTGTGCAGAGACGGCCGCTGCTCTGGCTTTGCCTTACTGTaGGACCCCACGTGGCTCCAGGCCTCAGTTATTCTGTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: PRLCRDGRCSGFALL*DPTWLQASVILSCC
Trigger: ACAGCAAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000469356.3
CDS-3UTR CAA 90 bp GCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTGCTCTGGCTTTGCCTaGCTGTCCTCAAAGACTGGG +
Preference number: 5 (lower is better)
Translates to: AFHREGTQQPQVELWRPECSGFA*LSSKTG
Trigger: CCCAGTCTTTGAGGACAGCAAGGCAAAGCCAGAGCA...CTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp CCAGTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTGGCCACCGGGTCTACAAGGAGGCCAAGGGGTaGCAGGACAGGCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PVDHHSCQRGPPLGHRVYKEAKG*QDRQRK
Trigger: CTTCCTCTGCCTGTCCTGCAACCCCTTGGCCTCCTT...GTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CAA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGAGGCCCACCACTaGGCCACCGGGTCTACGCCG +
Preference number: 5 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVAREAHH*ATGSTP
Trigger: CGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCT...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp CTTGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCAGGGCCCGGGCAGCCTaGAAGGAGTGCAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LAVRESQVGFRQHREMYPRARAA*KECRAA
Trigger: GGCAGCTCTGCACTCCTTCAAGGCTGCCCGGGCCCT...GGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp ACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCGCTGCTCAGGTCCCGTaGGAAGCCACGCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TMYTSLSHDGERGLWGRAAAQVP*EATQLK
Trigger: CTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAGC...GGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp CCGAGGGCATCCGAGAATTCCTTGTCCCCATCAGCTGACCCAGGGCTGGGGTTGTCCGGGAAAGCCAAGTaGGCTTCCGTCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: PRASENSLSPSADPGLGLSGKAK*ASVSTG
Trigger: CCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA...CAACCCCAGCCCTGGGTCAGCTGATGGGGACAAGGAATTCTCGGATGCCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CAA 90 bp CAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGTCAGTCCCATCCATCAGCTCCTTaGCCACCGGGGCCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: QGDPSCSSCHTTGPGSQSHPSAP*PPGPAR
Trigger: GCGGGCAGGCCCCGGTGGCAAAGGAGCTGATGGATG...GGACTGACTTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS GCA 90 bp CATCACAATACCTGGACAAGGTGGGCACCACAAGGCTCACAATCTTaGCCCACAGCTAGGCTGGGGCTGAGCCCAGGGTCGGGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: HHNTWTRWAPQGSQS*PTARLGLSPGSGPR
Trigger: TCTTGGGCCCGACCCTGGGCTCAGCCCCAGCCTAGCTGTGGGGCAAGATTGTGAGCCTTGTGGTGCCCACCTTGTCCAGGTATTGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CCA 90 bp TGCAACCCCCACAGCAACAACCCATGGCAGGGAGAAGGACTGGGGTaGCCAGAGACAGCCAGAGATTCAGGCGACAAGGGACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: CNPHSNNPWQGEGLG*PETARDSGDKGQDR
Trigger: CCTGTCCTGTCCCTTGTCGCCTGAATCTCTGGCTGTCTCTGGCCACCCCAGTCCTTCTCCCTGCCATGGGTTGTTGCTGTGGGGGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584760.1
CDS CCA 90 bp CTTCCTGCAACCCCCACAGCAACAACCCATGGCAGGGAGAAGGACTaGGGTGGCCAGAGACAGCCAGAGATTCAGGCGACAAGGGACAGG +
Preference number: 5 (lower is better)
Translates to: LPATPTATTHGREKD*GGQRQPEIQATRDR
Trigger: CCTGTCCCTTGTCGCCTGAATCTCTGGCTGTCTCTGGCCACCCCAGTCCTTCTCCCTGCCATGGGTTGTTGCTGTGGGGGTTGCAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584760.1
CDS-3UTR CAA 90 bp ATCGGCCACCAGAGGTCAGCACCATCATGGCCGCCGGTCTTAGGGTCAAGATCGAGCAGCGAGTCTGCCTaGATGAAGTGGGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: IGHQRSAPSWPPVLGSRSSSESA*MKWGCS
Trigger: GCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCT...CGATCTTGACCCTAAGACCGGCGGCCATGATGGTGCTGACCTCTGGTGGCCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp TGTCAGAAGCAGCGAGTCTGCCTTGATGAAGTGGGGCTGCAGCAGGACCGGGACCGACCAGTGGGACTGTaGCCAAGATGGTTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: CQKQRVCLDEVGLQQDRDRPVGL*PRWFRH
Trigger: GTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCG...GTCCCGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CAA 90 bp AATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGTCCAGCTGCGAGCCGGTaGATAGGCAGCTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: NGVRESAFHRTGNLPRPCPAASR*IGSFSA
Trigger: TGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCTGG...ACAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp TACACGTCTCTCTCCCACGACGGAGAGAGAGGCCTCTGGGGCAGAGCCCTGCTTTCCAGGTCAGCCTGCTaGCGATGCCTCCAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: YTSLSHDGERGLWGRALLSRSAC*RCLQKY
Trigger: GTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGGA...AAGCAGGGCTCTGCCCCAGAGGCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp GCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAGAGACAGGGGTGTCCGGGAAAGCCAAGTaGGCTTCCGTCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: ASTQDRSCTGPKWLETGVSGKAK*ASVSTG
Trigger: CCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGA...CACCCCTGTCTCTAGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS CCA 90 bp CGGCTGCTGGGTGTTCCCGGGAGGGCTTCCTGCAGAAATAAAGCATaGGGCTGCAGACACAGACCTCCCTCTCCCACTTTCAACCTGCTC +
Preference number: 5 (lower is better)
Translates to: RLLGVPGRASCRNKA*GCRHRPPSPTFNLL
Trigger: GAGCAGGTTGAAAGTGGGAGAGGGAGGTCTGTGTCTGCAGCCCCATGCTTTATTTCTGCAGGAAGCCCTCCCGGGAACACCCAGCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS-3UTR CAA 90 bp AGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCCCAGCTGCGAGCCGGTaGATAGGCAGCTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: STLTYTMYTSLSHDGERGPAASR*IGSFSA
Trigger: TGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCTGG...GCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp TCTCCGCATCTACGACCAGTGGGACTGTTGCCAAGATGGTTCCGCCACTCACCACCAGCTGCGAGCCGGTaGATAGGCAGCTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: SPHLRPVGLLPRWFRHSPPAASR*IGSFSA
Trigger: TGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCTGG...TGGTGAGTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCGTAGATGCGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577897.2
CDS-3UTR CAA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGCGCTTCTCAATGGCGTaGTGGGCTGTGCGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLRFSMA*WAVRFS
Trigger: AGAGAAGCGCACAGCCCACAACGCCATTGAGAAGCG...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp CCCACCGCCCAGGCGCATGAGCATCTGCTGACAGTCGTGCAGCAGCCGGCGATCCTTAGGTTCTCCTGCTaGAGTTTCTGGTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: PTAQAHEHLLTVVQQPAILRFSC*SFWLLC
Trigger: ACACAGCAACCAGAAACTCAAGCAGGAGAACCTAAG...GATCGCCGGCTGCTGCACGACTGTCAGCAGATGCTCATGCGCCTGGGCGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CAA 90 bp TCAAGATCGCGCCCCTCGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTTTCAGAGATTTGCTTTaGTGGACAGCAGTGCGCAGA +
Preference number: 5 (lower is better)
Translates to: SRSRPSGLPPRRHTAAAGFRDLL*WTAVRR
Trigger: TCTGCGCACTGCTGTCCACAAAAGCAAATCTCTGAA...ACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCGAGGGGCGCGATCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp CGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTAACAGCTGCACGGCCTaGTCAATGGAGCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RRHTAAAGRTVEARVSCTNSCTA*SMELLA
Trigger: AGCCAGCAGCTCCATTGACAAGGCCGTGCAGCTGTT...AGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp TCTCACAGATGGTCAGGCTGGCTGGACCAGACTCTGCCTTGGCACAGCCCAGCAAACAGCTGCACGGCCTaGTCAATGGAGCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SHRWSGWLDQTLPWHSPANSCTA*SMELLA
Trigger: AGCCAGCAGCTCCATTGACAAGGCCGTGCAGCTGTT...TGCTGGGCTGTGCCAAGGCAGAGTCTGGTCCAGCCAGCCTGACCATCTGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS-3UTR CAA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGGGGCCAGGCTTTAGGTaGGGGAATGGGAATGAAGGG +
Preference number: 5 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLGPGFR*GNGNEG
Trigger: CCCTTCATTCCCATTCCCCAACCTAAAGCCTGGCCC...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS GCA 90 bp CTGATGCAAATGCACTGGCTTCAAGCCAGGCCTCCAGTGCGAGGTTaGGCCTACCCCGGCAACAAGCACACCAGGACTGCTAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: LMQMHWLQARPPVRG*AYPGNKHTRTASNR
Trigger: CCTGTTACTAGCAGTCCTGGTGTGCTTGTTGCCGGGGTAGGCGCAACCTCGCACTGGAGGCCTGGCTTGAAGCCAGTGCATTTGCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 90 bp CACAGTGGCTCCGTCTGTCTTCATGGCTGTCAGAAGCAGCGAGTCTaGCTTGATGAAGTGGGGCTGCAGCAGGACCTGCTGGATCTGCGA +
Preference number: 5 (lower is better)
Translates to: HSGSVCLHGCQKQRV*LDEVGLQQDLLDLR
Trigger: TCGCAGATCCAGCAGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGACAGCCATGAAGACAGACGGAGCCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423161.3
CDS-3UTR CAA 90 bp CGGGCCTTCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAAGGGAAGTCACTGTCTaGGTTGTTGATAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RAFHREGTQQPQVELWRPREVTV*VVDKLK
Trigger: CTTCAGCTTATCAACAACCAAGACAGTGACTTCCCT...TGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGAAGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTAAGGAGGCCAAGGGGTaGCAGGACAGGCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVAKEAKG*QDRQRK
Trigger: CTTCCTCTGCCTGTCCTGCAACCCCTTGGCCTCCTT...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp ACTTCTTGCAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAAGACCCAGGGCTGGGGTaGGGCTGGGTCACACAGTTC +
Preference number: 5 (lower is better)
Translates to: TSCRETQAVAPVTQQVLEDPGLG*GWVTQF
Trigger: GAACTGTGTGACCCAGCCCAACCCCAGCCCTGGGTC...TTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTGCAAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTAGGGGCAGAGCCCTGCTaGCAGTCCGGGAAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: KRQSSTGASGQEAKHADLGAEPC*QSGKAK
Trigger: CTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCC...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp AGCCCTGGGCTTGGGGGTGGGGGTCGAAACAGTACTGGAAGAGGCGGAGGGCGGGATACAACGATTGTTTaGGAAAATCTGCAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: SPGLGGGGRNSTGRGGGRDTTIV*ENLQPV
Trigger: CACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC...CCGCCCTCCGCCTCTTCCAGTACTGTTTCGACCCCCACCCCCAAGCCCAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS TCA 90 bp TCATTGCCCCATGTGGCTTCCTATGGACAGTCCCTGCCTGGGCTCTaGTGCAAATGCACTGGCTTCAAGCCAGGCCTCCAGTGCGAGGTT +
Preference number: 5 (lower is better)
Translates to: SLPHVASYGQSLPGL*CKCTGFKPGLQCEV
Trigger: AACCTCGCACTGGAGGCCTGGCTTGAAGCCAGTGCATTTGCATCAGAGCCCAGGCAGGGACTGTCCATAGGAAGCCACATGGGGCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 90 bp TTACTGTGGGACCCCACGTGGCTCCAGGCCTCAGTTATTCTGTCTTaGTGTCCTCAAAGACTGGGCTGTCAGGCTCCGAGTCACTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLWDPTWLQASVILS*CPQRLGCQAPSHCH
Trigger: GTGGCAGTGACTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGCAAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000469356.3
CDS CCA 90 bp AAGCAATGCCTGCTGCTGCGAGTGCATCACAATACCTGGACAAGGTaGGCACCACAAGGCTCACAATCTTGCCCCACAGCTAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KQCLLLRVHHNTWTR*APQGSQSCPTARLG
Trigger: CCCCAGCCTAGCTGTGGGGCAAGATTGTGAGCCTTGTGGTGCCCACCTTGTCCAGGTATTGTGATGCACTCGCAGCAGCAGGCATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CCA 90 bp AGAGACGGCCGCTGCTCTGGCTTTGCCTTACTGTGGGACCCCACGTaGCTCCAGGCCTCAGTTATTCTGTCTTGCTGTCCTCAAAGACTG +
Preference number: 5 (lower is better)
Translates to: RDGRCSGFALLWDPT*LQASVILSCCPQRL
Trigger: CAGTCTTTGAGGACAGCAAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAAGGCAAAGCCAGAGCAGCGGCCGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000469356.3
CDS-3UTR CAA 90 bp TGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGCGACCAGTGGGACTGTaGCCAAGATGGTTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: CFGKSAARGFRPDSAGSRRPVGL*PRWFRH
Trigger: GTGGCGGAACCATCTTGGCAACAGTCCCACTGGTCG...CCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTCGCTTCTCAATGGCGTaGTGGGCTGTGCGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVARFSMA*WAVRFS
Trigger: AGAGAAGCGCACAGCCCACAACGCCATTGAGAAGCG...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp AGGGGCCGGGATGGGGGAGGTGAGACGTGCCAGACTTCTTGCAGGGAGACCCAACCCACCACCAGATCCTaGAGCTCAATGATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RGRDGGGETCQTSCRETQPTTRS*SSMILS
Trigger: TGACAAAATCATTGAGCTCAAGGATCTGGTGGTGGG...TTGGGTCTCCCTGCAAGAAGTCTGGCACGTCTCACCTCCCCCATCCCGGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp GGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTTGCACTGCCTCAGATTTATTCAGCTTaGCCTCAGTGCCCACCACCA +
Preference number: 5 (lower is better)
Translates to: GTQQPQVELWRPESLALPQIYSA*PQCPPP
Trigger: TGGTGGTGGGCACTGAGGCAAAGCTGAATAAATCTG...AGGCAGTGCAAGAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp TCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCTGCTTGAGTTTCTGGTaGCTGTGTTGCAGAAAGCGA +
Preference number: 5 (lower is better)
Translates to: STAKAHSSRRSNCGGQSLCLSFW*LCCRKR
Trigger: TCGCTTTCTGCAACACAGCAACCAGAAACTCAAGCA...GAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp ACTGCCTTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGCCGCTGCTCTGGCTTaGCCTTGCTGTCCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: TAFGLQSFDAGQKLHGTKAAALA*PCCPQR
Trigger: TCTTTGAGGACAGCAAGGCAAAGCCAGAGCAGCGGC...TTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAAGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp GGTGCGCACCACAAGAAGCAGGTCACACAGGAACAGCTGCACGGCCTTGTCAATTCCAGGTCAGCCTGCTaGCGATGCCTCCAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: GAHHKKQVTQEQLHGLVNSRSAC*RCLQKY
Trigger: GTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGGA...ATTGACAAGGCCGTGCAGCTGTTCCTGTGTGACCTGCTTCTTGTGGTGCGCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS GCA 90 bp GAAAGCCACCCACAGGAGCTGGTGTTCCCGGACATACAGCCATTTTaGGAGCACCTGTGCTGTCTAAAGCAATGCCTGCTGCTGCGAGTG +
Preference number: 5 (lower is better)
Translates to: ESHPQELVFPDIQPF*EHLCCLKQCLLLRV
Trigger: CACTCGCAGCAGCAGGCATTGCTTTAGACAGCACAGGTGCTCGCAAAATGGCTGTATGTCCGGGAACACCAGCTCCTGTGGGTGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 90 bp CCTGCTCTTCAGGTCTCTATCACCGACTGGCCTTGGATGAGTCATTaGCCCATGTGGCTTCCTATGGACAGTCCCTGCCTGGGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: PALQVSITDWPWMSH*PMWLPMDSPCLGSD
Trigger: ATCAGAGCCCAGGCAGGGACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS-3UTR CAA 90 bp CCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGCACTGACTCTTCCTaGATACCAGGCCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PSWLPSAQGNVPLSSLYTGTDSS*IPGPGE
Trigger: CTCCCCTGGGCCTGGTATCAAGGAAGAGTCAGTGCC...TGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp TCCACCGCGAAGGCACACAGCAGCCGCAGGTCGAACTGTGGAGGCCAGAGTCTCAGATCCTTCAGAGATTaGCTTTTGTGGACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: STAKAHSSRRSNCGGQSLRSFRD*LLWTAV
Trigger: CACTGCTGTCCACAAAAGCAAATCTCTGAAGGATCT...GAGACTCTGGCCTCCACAGTTCGACCTGCGGCTGCTGTGTGCCTTCGCGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp TGCAGTCCGGGAAAGCCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCGCATCCGAGAATTCCTaGTCCCCATCAGCTGACCCA +
Preference number: 5 (lower is better)
Translates to: CSPGKPSWLPSAQGNVPLASENS*SPSADP
Trigger: TGGGTCAGCTGATGGGGACAAGGAATTCTCGGATGC...GAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGGCTTTCCCGGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp TGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGAACAGCTGCACGGCCTaGTCAATGGAGCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: CFGKSAARGFRPDSAGSRNSCTA*SMELLA
Trigger: AGCCAGCAGCTCCATTGACAAGGCCGTGCAGCTGTT...CCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGGGAGGCCAGAGTCTCTaGCACTGCCTTCGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRGGQSL*HCLRPS
Trigger: TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCC...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp CCAAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGAGGCCAGAGTCTCTaGCACTGCCTTCGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: PSWLPSAQGNVPLSSLYTGGQSL*HCLRPS
Trigger: TGAAGGCCGAAGGCAGTGCAAGAGACTCTGGCCTCC...TGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp AGGTCCTGGAAGTCAGTCCATCCTCCCGTGCCACCCAGGGACCTTGTGGCCGGAGATACAACGATTGTTTaGGAAAATCTGCAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: RSWKSVHPPVPPRDLVAGDTTIV*ENLQPV
Trigger: CACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC...TCCGGCCACAAGGTCCCTGGGTGGCACGGGAGGATGGACTGACTTCCAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578469.1
CDS-3UTR CAA 90 bp AAGTTGGCTTCCGTCAGCACAGGGAAATGTACCCCTCTCTTCCCTGTACACAGGTGGCAGGGCCCAACCTaGCTGTCCTCAAAGACTGGG +
Preference number: 5 (lower is better)
Translates to: KLASVSTGKCTPLFPVHRWQGPT*LSSKTG
Trigger: CCCAGTCTTTGAGGACAGCAAGGTTGGGCCCTGCCA...CCTGTGTACAGGGAAGAGAGGGGTACATTTCCCTGTGCTGACGGAAGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395756.5
CDS CCA 90 bp CAGGTCTCTATCACCGACTGGCCTTGGATGAGTCATTGCCCCATGTaGCTTCCTATGGACAGTCCCTGCCTGGGCTCTGATGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: QVSITDWPWMSHCPM*LPMDSPCLGSDANA
Trigger: TGCATTTGCATCAGAGCCCAGGCAGGGACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS-3UTR CAA 90 bp AGAGGCCTCTGGGGCAGAGCCCTGCTTGCAGTCCGGGAAAGCCAAGTTGGCTTCAGATCCTTCAGAGATTaGCTTTTGTGGACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RGLWGRALLAVRESQVGFRSFRD*LLWTAV
Trigger: CACTGCTGTCCACAAAAGCAAATCTCTGAAGGATCT...GAAGCCAACTTGGCTTTCCCGGACTGCAAGCAGGGCTCTGCCCCAGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTAGGGCCCGGGCAGCCTaGAAGGAGTGCAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: YNDCFGKSAARGFRPDSARARAA*KECRAA
Trigger: GGCAGCTCTGCACTCCTTCAAGGCTGCCCGGGCCCT...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGGCTGCTCAGGTCCCGTaGGAAGCCACGCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGAAQVP*EATQLK
Trigger: CTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAGC...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000485080.6
CDS-3UTR CAA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTTGCCACCCAGGGACCTaGTGGCCGGAGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: KDTTIVLENLQPVDSDQICHPGT*WPEGEG
Trigger: CCCCTCCCCCTCCGGCCACAAGGTCCCTGGGTGGCA...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395757.6
ENST00000578469.1
CDS TCA 90 bp ACTTTCAACCTGCTCTTCAGGTCTCTATCACCGACTGGCCTTGGATaGGTCATTGCCCCATGTGGCTTCCTATGGACAGTCCCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: TFNLLFRSLSPTGLG*VIAPCGFLWTVPAW
Trigger: CCAGGCAGGGACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAGGTTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 90 bp CCGGACATACAGCCATTTTGCGAGCACCTGTGCTGTCTAAAGCAATaGCTGCTGCTGCGAGTGCATCACAATACCTGGACAAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: PDIQPFCEHLCCLKQ*LLLRVHHNTWTRWA
Trigger: TGCCCACCTTGTCCAGGTATTGTGATGCACTCGCAGCAGCAGGCATTGCTTTAGACAGCACAGGTGCTCGCAAAATGGCTGTATGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 90 bp CAGGAGCTGGTGTTCCCGGACATACAGCCATTTTGCGAGCACCTGTaGTGTCTAAAGCAATGCCTGCTGCTGCGAGTGCATCACAATACC +
Preference number: 5 (lower is better)
Translates to: QELVFPDIQPFCEHL*CLKQCLLLRVHHNT
Trigger: GGTATTGTGATGCACTCGCAGCAGCAGGCATTGCTTTAGACAGCACAGGTGCTCGCAAAATGGCTGTATGTCCGGGAACACCAGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 90 bp ACAGGGCATCTCAAGCAGCCGAGTGGAGCCCCAGTTTCTAAAGCCTaGACAGACCTCTACTCACATCACAGCAGAAGCTTCTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: TGHLKQPSGAPVSKA*TDLYSHHSRSFFLC
Trigger: GCACAGGAAGAAGCTTCTGCTGTGATGTGAGTAGAGGTCTGTGCAGGCTTTAGAAACTGGGGCTCCACTCGGCTGCTTGAGATGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 90 bp AAGCATGGGGCTGCAGACACAGACCTCCCTCTCCCACTTTCAACCTaGTCTTCAGGTCTCTATCACCGACTGGCCTTGGATGAGTCATTG +
Preference number: 5 (lower is better)
Translates to: KHGAADTDLPLPLST*SSGLYHRLALDESL
Trigger: CAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAGGTTGAAAGTGGGAGAGGGAGGTCTGTGTCTGCAGCCCCATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 90 bp AAGGGGGTGCGGAGCTGCTTTGCAACATTACTGCCTCAGGACCTTTaGACTTGTTCCTTCTACCTGAACCGTTCCTCGCCTAGTAGCACC +
Preference number: 5 (lower is better)
Translates to: KGVRSCFATLLPQDL*TCSFYLNRSSPSST
Trigger: GGTGCTACTAGGCGAGGAACGGTTCAGGTAGAAGGAACAAGTGCAAAGGTCCTGAGGCAGTAATGTTGCAAAGCAGCTCCGCACCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CCA 90 bp TGCTGTCTAAAGCAATGCCTGCTGCTGCGAGTGCATCACAATACCTaGACAAGGTGGGCACCACAAGGCTCACAATCTTGCCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: CCLKQCLLLRVHHNT*TRWAPQGSQSCPTA
Trigger: AGCTGTGGGGCAAGATTGTGAGCCTTGTGGTGCCCACCTTGTCCAGGTATTGTGATGCACTCGCAGCAGCAGGCATTGCTTTAGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CCA 90 bp TCCCACTTTCAACCTGCTCTTCAGGTCTCTATCACCGACTGGCCTTaGATGAGTCATTGCCCCATGTGGCTTCCTATGGACAGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: SHFQPALQVSITDWP*MSHCPMWLPMDSPC
Trigger: GCAGGGACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAGGTTGAAAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS-3UTR CAA 90 bp GAATGGAGTCAGGGAGTCGGCCTTTCACAGAACAGGAAACCTCCCCCGCCCCTGAGGGAAGTCACTGTCTaGGTTGTTGATAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: EWSQGVGLSQNRKPPPPLREVTV*VVDKLK
Trigger: CTTCAGCTTATCAACAACCAAGACAGTGACTTCCCT...CAGGGGCGGGGGAGGTTTCCTGTTCTGTGAAAGGCCGACTCCCTGACTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCAGATTTATTCAGCTTaGCCTCAGTGCCCACCACCA +
Preference number: 5 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGQIYSA*PQCPPP
Trigger: TGGTGGTGGGCACTGAGGCAAAGCTGAATAAATCTG...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCACCAACAGCCCATaGAGCAGCCAGACCACTGGG +
Preference number: 5 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGSTNSP*SSQTTG
Trigger: CCCAGTGGTCTGGCTGCTCAATGGGCTGTTGGTGCT...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp CAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTACACTATGCATCCGAGAATTCCTaGTCCCCATCAGCTGACCCA +
Preference number: 5 (lower is better)
Translates to: QSSTGASGQEAKHADLHYASENS*SPSADP
Trigger: TGGGTCAGCTGATGGGGACAAGGAATTCTCGGATGC...ATAGTGTAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS CCA 90 bp CACAACCTTATTTGCACAACCCTTGTTGGCACACAGCTGTATGTGTaGGCAATGCCACCAGGACAGAAAGCCACCCACAGGAGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: HNLICTTLVGTQLYV*AMPPGQKATHRSWC
Trigger: ACACCAGCTCCTGTGGGTGGCTTTCTGTCCTGGTGGCATTGCCCACACATACAGCTGTGTGCCAACAAGGGTTGTGCAAATAAGGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CCA 90 bp TCCCTCTCCCACTTTCAACCTGCTCTTCAGGTCTCTATCACCGACTaGCCTTGGATGAGTCATTGCCCCATGTGGCTTCCTATGGACAGT +
Preference number: 5 (lower is better)
Translates to: SLSHFQPALQVSITD*PWMSHCPMWLPMDS
Trigger: ACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAGGTTGAAAGTGGGAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS-3UTR CAA 90 bp TTCGGCCTTCAAAGCTTCGACGCAGGACAGAAGCTGCACGGGACCAAAGTGGCTCTTAGGTTCTCCTGCTaGAGTTTCTGGTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: FGLQSFDAGQKLHGTKVALRFSC*SFWLLC
Trigger: ACACAGCAACCAGAAACTCAAGCAGGAGAACCTAAG...AGCCACTTTGGTCCCGTGCAGCTTCTGTCCTGCGTCGAAGCTTTGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp TTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCCGGGCCTTAGGTTCTCCTGCTaGAGTTTCTGGTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: FWKICSPWIPTRFSWEPGLRFSC*SFWLLC
Trigger: ACACAGCAACCAGAAACTCAAGCAGGAGAACCTAAG...GCCCGGCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCCAAGCTGTAGCTCCTaGTGGCCGGAGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: KDTTIVLENLQPVDSDQIPSCSS*WPEGEG
Trigger: CCCCTCCCCCTCCGGCCACAAGGAGCTACAGCTTGG...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485080.6
CDS GCA 90 bp GTTTCTGGTTGCTGTGTTGCAGAAAGCGAATGTAGTCGATGGCCTTaGGCAAGACAGCAGATTTATTCAGCTGCACGGTGTGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VSGCCVAESECSRWP*ARQQIYSAARCGRE
Trigger: CTCCCTCCCACACCGTGCAGCTGAATAAATCTGCTGTCTTGCGCAAGGCCATCGACTACATTCGCTTTCTGCAACACAGCAACCAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS-3UTR CAA 90 bp AGCACGCTGACCTACACTATGTACACGTCTCTCTCCCACGACGGAGAGAGAGGCTTTCTGGTTGCTGTGTaGCAGAAAGCGAATGTAGTC +
Preference number: 5 (lower is better)
Translates to: STLTYTMYTSLSHDGERGFLVAV*QKANVV
Trigger: GACTACATTCGCTTTCTGCAACACAGCAACCAGAAA...GCCTCTCTCTCCGTCGTGGGAGAGAGACGTGTACATAGTGTAGGTCAGCGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp AACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGTGCTCTGGCTTTGCCTaGCTGTCCTCAAAGACTGGG +
Preference number: 5 (lower is better)
Translates to: NDCFGKSAARGFRPDSAGCSGFA*LSSKTG
Trigger: CCCAGTCTTTGAGGACAGCAAGGCAAAGCCAGAGCA...CCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp ACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCATCCGAGAATTCCTaGTCCCCATCAGCTGACCCA +
Preference number: 5 (lower is better)
Translates to: TIVLENLQPVDSDQIQLGASENS*SPSADP
Trigger: TGGGTCAGCTGATGGGGACAAGGAATTCTCGGATGC...TCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp AAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCTGACCTATTCAGAGATTTGCTTTaGTGGACAGCAGTGCGCAGA +
Preference number: 5 (lower is better)
Translates to: KRQSSTGASGQEAKHADLFRDLL*WTAVRR
Trigger: TCTGCGCACTGCTGTCCACAAAAGCAAATCTCTGAA...TAGGTCAGCGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355815.8
ENST00000395756.5
CDS-3UTR CAA 90 bp ACTTCTTGCAGGGAGACCCAAGCTGTAGCTCCTGTCACACAACAGGTCCTGGAATTCAGAGATTTGCTTTaGTGGACAGCAGTGCGCAGA +
Preference number: 5 (lower is better)
Translates to: TSCRETQAVAPVTQQVLEFRDLL*WTAVRR
Trigger: TCTGCGCACTGCTGTCCACAAAAGCAAATCTCTGAA...TTCCAGGACCTGTTGTGTGACAGGAGCTACAGCTTGGGTCTCCCTGCAAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp ATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCGCCGCTGCTCTGGCTTaGCCTTGCTGTCCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: IQRLFWKICSPWIPTRFSAAALA*PCCPQR
Trigger: TCTTTGAGGACAGCAAGGCAAAGCCAGAGCAGCGGC...GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS GCA 90 bp GTTTCTGGTTGCTGTGTTGCAGAAAGCGAATGTAGTCGATGGCCTTaGGCAAGACAGCAGATTTATTCAGCTTTGCCTCAGTGCCCACCA +
Preference number: 5 (lower is better)
Translates to: VSGCCVAESECSRWP*ARQQIYSALPQCPP
Trigger: TGGTGGGCACTGAGGCAAAGCTGAATAAATCTGCTGTCTTGCGCAAGGCCATCGACTACATTCGCTTTCTGCAACACAGCAACCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000470247.1
ENST00000662439.1
CDS-3UTR CAA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACGGCACTGACTCTTCCTaGATACCAGGCCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDGTDSS*IPGPGE
Trigger: CTCCCCTGGGCCTGGTATCAAGGAAGAGTCAGTGCC...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp AAGTTTGCAAAAGGCAAAGTAGCACAGGAGCCTCAGGTCAGGAGGCTAAGCACGCCCACCACCAGATCCTaGAGCTCAATGATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: KFAKGKVAQEPQVRRLSTPTTRS*SSMILS
Trigger: TGACAAAATCATTGAGCTCAAGGATCTGGTGGTGGG...CGTGCTTAGCCTCCTGACCTGAGGCTCCTGTGCTACTTTGCCTTTTGCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355815.8
CDS-3UTR CAA 90 bp GATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGGGAGCTGCTTGAGTTTCTGGTaGCTGTGTTGCAGAAAGCGA +
Preference number: 5 (lower is better)
Translates to: DCFGKSAARGFRPDSAGSCLSFW*LCCRKR
Trigger: TCGCTTTCTGCAACACAGCAACCAGAAACTCAAGCA...GCTCCCAGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTAAGGAGGCCAAGGGGTaGCAGGACAGGCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KDTTIVLENLQPVDSDQIKEAKG*QDRQRK
Trigger: CTTCCTCTGCCTGTCCTGCAACCCCTTGGCCTCCTT...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp TCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCTCCAGGTCAGCCTGCTaGCGATGCCTCCAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SIKIQRLFWKICSPWIPTSRSAC*RCLQKY
Trigger: GTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGGA...GGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp CCTTGTGAAAGGAATTGTCATCAGGTAACCATCAAGAAGATGCTTGGTCTTTTTGCTGCTCAGGTCCCGTaGGAAGCCACGCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: PCERNCHQVTIKKMLGLFAAQVP*EATQLK
Trigger: CTTGAGCTGCGTGGCTTCCAACGGGACCTGAGCAGC...AAAAAGACCAAGCATCTTCTTGATGGTTACCTGATGACAATTCCTTTCACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CAA 90 bp AAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTGGGCCAGGCTTTAGGTaGGGGAATGGGAATGAAGGG +
Preference number: 5 (lower is better)
Translates to: KDTTIVLENLQPVDSDQIGPGFR*GNGNEG
Trigger: CCCTTCATTCCCATTCCCCAACCTAAAGCCTGGCCC...AATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CAA 90 bp CCTTGTGAAAGGAATTGTCATCAGGTAACCATCAAGAAGATGCTTGGTCTTTTTAACAGCTGCACGGCCTaGTCAATGGAGCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: PCERNCHQVTIKKMLGLFNSCTA*SMELLA
Trigger: AGCCAGCAGCTCCATTGACAAGGCCGTGCAGCTGTT...AAAAAGACCAAGCATCTTCTTGATGGTTACCTGATGACAATTCCTTTCACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS-3UTR CAA 90 bp ATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCAGATCCTTCAGAGATTaGCTTTTGTGGACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: IQRLFWKICSPWIPTRFSRSFRD*LLWTAV
Trigger: CACTGCTGTCCACAAAAGCAAATCTCTGAAGGATCT...GCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS-3UTR CAA 90 bp TACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACCAGATTCAGCTGATACAACGATTGTTTaGGAAAATCTGCAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: YNDCFGKSAARGFRPDSADTTIV*ENLQPV
Trigger: CACGGGCTGCAGATTTTCCAAAACAATCGTTGTATC...AGCTGAATCTGGTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395757.6
ENST00000485080.6
ENST00000578469.1
CDS-3UTR CAA 90 bp GTCAATAAAGATACAACGATTGTTTTGGAAAATCTGCAGCCCGTGGATTCCGACTTTCTGGTTGCTGTGTaGCAGAAAGCGAATGTAGTC +
Preference number: 5 (lower is better)
Translates to: VNKDTTIVLENLQPVDSDFLVAV*QKANVV
Trigger: GACTACATTCGCTTTCTGCAACACAGCAACCAGAAA...GTCGGAATCCACGGGCTGCAGATTTTCCAAAACAATCGTTGTATCTTTATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395757.6
CDS GCA 72 bp TCTCAGTCGCCGCCGCCGCTCCGCGCGTTCGTGTCCTaGCCTGGCCTCAGAGGCGGCCCGGCGCCGGCGAAA +
Preference number: 6 (lower is better)
Translates to: SQSPPPLRAFVS*PGLRGGPAPAK
Trigger: TTTCGCCGGCGCCGGGCCGCCTCTGAGGCCAGGGCAGGACACGAACGCGCGGAGCGGCGGCGGCGACTGAGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
CDS CCA 72 bp GTCGCCGCCGCCGCTCCGCGCGTTCGTGTCCTGCCCTaGCCTCAGAGGCGGCCCGGCGCCGGCGAAAAGTTC +
Preference number: 6 (lower is better)
Translates to: VAAAAPRVRVLP*PQRRPGAGEKF
Trigger: GAACTTTTCGCCGGCGCCGGGCCGCCTCTGAGGCCAGGGCAGGACACGAACGCGCGGAGCGGCGGCGGCGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
CDS CCA 72 bp CTGGACCTGGGTGTGCAAGGAGACGGGCGGGACCCCTaGCGGGGAAGCCAGTGGCAGGCCAGGCAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: LDLGVQGDGRDP*RGSQWQARQRL
Trigger: CAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCAGGGGTCCCGCCCGTCTCCTTGCACACCCAGGTCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000662439.1
CDS TCA 72 bp ACGGCTCGCCCAGCGCCTGCTCCAAAGCCGCCTCGCTaGAGGGTGGCTCGTCCATGGCGCAGCCGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: TARPAPAPKPPR*RVARPWRSRLL
Trigger: GAGGAGGCGGCTGCGCCATGGACGAGCCACCCTTCAGCGAGGCGGCTTTGGAGCAGGCGCTGGGCGAGCCGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
CDS GCA 72 bp AGCAGCTGCCCCCTCACCTCCTTTGCCACCGGGGCCTaGCCGCCGCCTCAGACTGCGGTCGAGGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SSCPLTSFATGA*PPPQTAVEELV
Trigger: CACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGGCAGGCCCCGGTGGCAAAGGAGGTGAGGGGGCAGCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478616.1
CDS CCA 72 bp AGTGCAATCCATGGCTCCGCGATCTGCGCCCGCCCTTaGGGCGTCCAGGCCGTTGGCCCTACCCCTCCCCGC +
Preference number: 6 (lower is better)
Translates to: SAIHGSAICARP*GVQAVGPTPPR
Trigger: GCGGGGAGGGGTAGGGCCAACGGCCTGGACGCCCCAAGGGCGGGCGCAGATCGCGGAGCCATGGATTGCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355815.8
ENST00000423161.3
ENST00000583732.1
CDS GCA 72 bp TGCACTCACTCAGACTCCTGCAGCACCCGGGGCAGGTaGTCCACCAGCGGGCACAGCCGCTCAGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: CTHSDSCSTRGR*STSGHSRSAAS
Trigger: GGAGGCGGCTGAGCGGCTGTGCCCGCTGGTGGAGCACCTGCCCCGGGTGCTGCAGGAGTCTGAGTGAGTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS GCA 72 bp CCTGGCGGGGAAGCCAGTGGCAGGCCAGGCAGCGGCTaGTGGGTGTTCCCGGGAGGGCTTCCTGTAGAGAAG +
Preference number: 6 (lower is better)
Translates to: PGGEASGRPGSG*WVFPGGLPVEK
Trigger: CTTCTCTACAGGAAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
ENST00000423161.3
CDS GCA 72 bp GGCTGTCAGGCTCCGAGTCACTGCCACTGCCACCGCTaGCACTGCCCCTGCTGCCAAGGGACAAGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GCQAPSHCHCHR*HCPCCQGTRGC
Trigger: GCAGCCCCTTGTCCCTTGGCAGCAGGGGCAGTGGCAGCGGTGGCAGTGGCAGTGACTCGGAGCCTGACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395756.5
ENST00000395757.6
ENST00000469356.3
ENST00000487401.1
ENST00000580540.1
ENST00000583080.1
ENST00000662439.1
CDS GCA 72 bp GATGCCCAGGCTGGCCGGTCCCACCTCTGCTCTCGGTaGCCAGCACGTTGCGCCCAGGGCTATGGTAGACGC +
Preference number: 6 (lower is better)
Translates to: DAQAGRSHLCSR*PARCAQGYGRR
Trigger: GCGTCTACCATAGCCCTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGGTGGGACCGGCCAGCCTGGGCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580540.1
CDS GCA 72 bp AGCCTGGGGGCTCACCCCGAGTGTCCCTCCCAAAGATaGCCAGGCTGGCCGGTCCCACCTCTGCTCTCGGTG +
Preference number: 6 (lower is better)
Translates to: SLGAHPECPSQR*PGWPVPPLLSV
Trigger: CACCGAGAGCAGAGGTGGGACCGGCCAGCCTGGGCATCTTTGGGAGGGACACTCGGGGTGAGCCCCCAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580540.1
CDS GCA 72 bp GGCAGGAGGAACCTGCCGTGCACTCACTCAGACTCCTaGAGCACCCGGGGCAGGTGCTCCACCAGCGGGCAC +
Preference number: 6 (lower is better)
Translates to: GRRNLPCTHSDS*STRGRCSTSGH
Trigger: GTGCCCGCTGGTGGAGCACCTGCCCCGGGTGCTGCAGGAGTCTGAGTGAGTGCACGGCAGGTTCCTCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS CCA 72 bp CAGCATGCCCCGGCTGTGCAGAGACGGCCGCTGCTCTaGCTTTGCCTGGTGGGGTTGGGCAGGGTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: QHAPAVQRRPLL*LCLVGLGRVVR
Trigger: CCTCACCACCCTGCCCAACCCCACCAGGCAAAGCCAGAGCAGCGGCCGTCTCTGCACAGCCGGGGCATGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471445.5
CDS GCA 72 bp CCTGGCGGGGAAGCCAGTGGCAGGCCAGGCAGCGGCTaGTGGGTGTTCCCGGGAGGGCTTCCTGCAGAAATA +
Preference number: 6 (lower is better)
Translates to: PGGEASGRPGSG*WVFPGGLPAEI
Trigger: TATTTCTGCAGGAAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCTGGCCTGCCACTGGCTTCCCCGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 72 bp GTCAGCACATCCATCAGCTCCTTTGCCACCGGGGCCTaGCCGCCGCCTCAGACTGCGGTCGAGGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: VSTSISSFATGA*PPPQTAVEELV
Trigger: CACCAGCTCCTCGACCGCAGTCTGAGGCGGCGGGCAGGCCCCGGTGGCAAAGGAGCTGATGGATGTGCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485080.6
ENST00000578469.1
CDS GCA 72 bp CCTCCCAAAGATGCCCAGGCTGGCCGGTCCCACCTCTaGTCTCGGTGCCCAGCACGTTGCGCCCAGGGCTAT +
Preference number: 6 (lower is better)
Translates to: PPKDAQAGRSHL*SRCPARCAQGY
Trigger: ATAGCCCTGGGCGCAACGTGCTGGGCACCGAGAGCAGAGGTGGGACCGGCCAGCCTGGGCATCTTTGGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580540.1
CDS CCA 72 bp ACTGTCAGTAGCTGCTGGGGGACCACACTCTGGACCTaGGTGTGCAAGGAGACGGGCGGGACCCCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: TVSSCWGTTLWT*VCKETGGTPGG
Trigger: CCCGCCAGGGGTCCCGCCCGTCTCCTTGCACACCCAGGTCCAGAGTGTGGTCCCCCAGCAGCTACTGACAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000662439.1
CDS CAA 90 bp CGGCTCTGGGCAGAGGCCGGGGCCTTGCTGCCAGCTGCGAGCCGGTaGATAGGCAGCTTCTCCGCATCTACGACCAGTGGGACTGTTGCC +
Preference number: 6 (lower is better)
Translates to: RLWAEAGALLPAASR*IGSFSASTTSGTVA
Trigger: GGCAACAGTCCCACTGGTCGTAGATGCGGAGAAGCTGCCTATCAACCGGCTCGCAGCTGGCAGCAAGGCCCCGGCCTCTGCCCAGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000470247.1
ENST00000583732.1
ENST00000662439.1
CDS GCA 72 bp CAGAAGAGGGAGGGTCCCCTGAACCCTCAGTCACGCTaGACGGGGGAGCTGAGAAGGGAGCCAGGACAGGGG +
Preference number: 6 (lower is better)
Translates to: QKREGPLNPQSR*TGELRREPGQG
Trigger: CCCCTGTCCTGGCTCCCTTCTCAGCTCCCCCGTGCAGCGTGACTGAGGGTTCAGGGGACCCTCCCTCTTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS CAA 90 bp CGCCGCAGCCAGTGGATCACCACAGCTGTCAGAGAGGCCCACCACTaGGCCACCGGGTCTACGCCTGCAGAAGAGGGAGGGTCCCCTGAA +
Preference number: 6 (lower is better)
Translates to: RRSQWITTAVREAHH*ATGSTPAEEGGSPE
Trigger: TTCAGGGGACCCTCCCTCTTCTGCAGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACTGGCTGCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS TCA 72 bp CCAGGTTCAGGGCACTCAGCGCCAGGTTGGTGGCAGTaGGGTGCCCGCCTGTGTGCTTCCCTGGAAGGCAAG +
Preference number: 6 (lower is better)
Translates to: PGSGHSAPGWWQ*GARLCASLEGK
Trigger: CTTGCCTTCCAGGGAAGCACACAGGCGGGCACCTCACTGCCACCAACCTGGCGCTGAGTGCCCTGAACCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447641.5
CDS TCA 72 bp GGCAGGGGTCTCCGGTGGTGGTGGCCATGCTGGAACTaGTGGAGAAGCTGTAGGCAGGAGCCCCCGCAGCAT +
Preference number: 6 (lower is better)
Translates to: GRGLRWWWPCWN*WRSCRQEPPQH
Trigger: ATGCTGCGGGGGCTCCTGCCTACAGCTTCTCCATCAGTTCCAGCATGGCCACCACCACCGGAGACCCCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447641.5
CDS TCA 72 bp CCGGGGACTCACCGGTGGTGGTGGCCATGCTGGAACTaGTGGAGAAGCTGTAGGCAGGAGCCCCCGCAGCAT +
Preference number: 6 (lower is better)
Translates to: PGTHRWWWPCWN*WRSCRQEPPQH
Trigger: ATGCTGCGGGGGCTCCTGCCTACAGCTTCTCCATCAGTTCCAGCATGGCCACCACCACCGGTGAGTCCCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS GCA 72 bp CAAAGACTGGGCTGTCAGGCTCCGAGTCACTGCCACTaGCACCGCTGCCACTGCCCCTGCTGCCAAGGGACA +
Preference number: 6 (lower is better)
Translates to: QRLGCQAPSHCH*HRCHCPCCQGT
Trigger: TGTCCCTTGGCAGCAGGGGCAGTGGCAGCGGTGGCAGTGGCAGTGACTCGGAGCCTGACAGCCCAGTCTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395756.5
ENST00000395757.6
ENST00000469356.3
ENST00000487401.1
ENST00000580540.1
ENST00000583080.1
ENST00000662439.1
CDS GCA 72 bp CATGTCTTCGAAAGTGCAATCCATGGCTCCGCGATCTaGGCCCGCCCTTGGGGCGTCCAGGCCGTTGGCCCT +
Preference number: 6 (lower is better)
Translates to: HVFESAIHGSAI*ARPWGVQAVGP
Trigger: AGGGCCAACGGCCTGGACGCCCCAAGGGCGGGCGCAGATCGCGGAGCCATGGATTGCACTTTCGAAGACATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355815.8
ENST00000423161.3
ENST00000476994.1
ENST00000583732.1
CDS GCA 72 bp TGCAGACAGCAGGGTCTGGCTAGCTGCTGCTGTGCCTaGCGCCATCTCAGGGAGGCCTTCCCTGGCTACCAC +
Preference number: 6 (lower is better)
Translates to: CRQQGLASCCCA*RHLREAFPGYH
Trigger: GTGGTAGCCAGGGAAGGCCTCCCTGAGATGGCGGCAGGCACAGCAGCAGCTAGCCAGACCCTGCTGTCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CCA 72 bp CTGCTGTGCCTGCCGCCATCTCAGGGAGGCCTTCCCTaGCTACCACCAGGGGACCCTCACCATCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LLCLPPSQGGLP*LPPGDPHHPLP
Trigger: AGGAAGAGGATGGTGAGGGTCCCCTGGTGGTAGCCAGGGAAGGCCTCCCTGAGATGGCGGCAGGCACAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CAA 90 bp GCATCCCCTGCACACTCTGCCAGGTTCAGGGCACTCAGCGCCAGGTaGGTGGCAGTGAGGTGCCCGCCTGTGTGCTTCCCTGGAAGGCAA +
Preference number: 6 (lower is better)
Translates to: ASPAHSARFRALSAR*VAVRCPPVCFPGRQ
Trigger: TTGCCTTCCAGGGAAGCACACAGGCGGGCACCTCACTGCCACCAACCTGGCGCTGAGTGCCCTGAACCTGGCAGAGTGTGCAGGGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447641.5
ENST00000490796.1
CDS CCA 72 bp ACCGTGGCAGGGCCCAACCTTGCTGTCCTCAAAGACTaGGCTGTCAGGCTCCGAGTCACTGCCACTGCCACC +
Preference number: 6 (lower is better)
Translates to: TVAGPNLAVLKD*AVRLRVTATAT
Trigger: GGTGGCAGTGGCAGTGACTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGCAAGGTTGGGCCCTGCCACGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395756.5
ENST00000471445.5
ENST00000487401.1
CDS CCA 72 bp AGACGGCCGCTGCTCTGGCTTGCTGTCCTCAAAGACTaGGCTGTCAGGCTCCGAGTCACTGCCACTGCCACC +
Preference number: 6 (lower is better)
Translates to: RRPLLWLAVLKD*AVRLRVTATAT
Trigger: GGTGGCAGTGGCAGTGACTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGCAAGCCAGAGCAGCGGCCGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583080.1
CDS CAA 72 bp CAGTGGATCACCACAGCTGTCAGAGAGGCCCACCACTaGGCCACCGGGTCTACGCCTGCAGAAGAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: QWITTAVREAHH*ATGSTPAEEGG
Trigger: CCCTCCCTCTTCTGCAGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS TCA 72 bp AAGGCTCACAATCTTGCCCCACAGCTAGGCTGGGGCTaGGCCCAGGGTCGGGCCCAAGACTGCAGACTTCAG +
Preference number: 6 (lower is better)
Translates to: KAHNLAPQLGWG*AQGRAQDCRLQ
Trigger: CTGAAGTCTGCAGTCTTGGGCCCGACCCTGGGCTCAGCCCCAGCCTAGCTGTGGGGCAAGATTGTGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 72 bp ATGCACTGGCTTCAAGCCAGGCCTCCAGTGCGAGGTTaGGCCTACCCCGGCAACAAGCACACCAGGACTGCT +
Preference number: 6 (lower is better)
Translates to: MHWLQARPPVRG*AYPGNKHTRTA
Trigger: AGCAGTCCTGGTGTGCTTGTTGCCGGGGTAGGCGCAACCTCGCACTGGAGGCCTGGCTTGAAGCCAGTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS CCA 72 bp CCGCTGCTCTGGCTTTGCCTTGCTGTCCTCAAAGACTaGGCTGTCAGGCTCCGAGTCACTGCCACTGCCACC +
Preference number: 6 (lower is better)
Translates to: PLLWLCLAVLKD*AVRLRVTATAT
Trigger: GGTGGCAGTGGCAGTGACTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGCAAGGCAAAGCCAGAGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395757.6
ENST00000580540.1
ENST00000662439.1
CDS CCA 72 bp AGTGGATCACCACAGCTGTCAGAGAGGCCCACCACTTaGCCACCGGGTCTACGCCTGCAGAAGAGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: SGSPQLSERPTT*PPGLRLQKREG
Trigger: ACCCTCCCTCTTCTGCAGGCGTAGACCCGGTGGCCAAGTGGTGGGCCTCTCTGACAGCTGTGGTGATCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS CCA 72 bp ACCTGGGTTCCCGGCCAAGCTGTACAGGCTCTCCCATaGGGTACTGAGCACGGACCAGTCCCCATCCACGAA +
Preference number: 6 (lower is better)
Translates to: TWVPGQAVQALP*GTEHGPVPIHE
Trigger: TTCGTGGATGGGGACTGGTCCGTGCTCAGTACCCCATGGGAGAGCCTGTACAGCTTGGCCGGGAACCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584760.1
CDS CAA 72 bp AATGCACTGGCTTCAAGCCAGGCCTCCAGTGCGAGGTaGCGCCTACCCCGGCAACAAGCACACCAGGACTGC +
Preference number: 6 (lower is better)
Translates to: NALASSQASSAR*RLPRQQAHQDC
Trigger: GCAGTCCTGGTGTGCTTGTTGCCGGGGTAGGCGCAACCTCGCACTGGAGGCCTGGCTTGAAGCCAGTGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS TCA 72 bp GGGTCTGCAGGATGCTCAGTGGCACTGACTCTTCCTTaGTACCAGGCCCAGGGGAGAAAGCGGGCATGGACG +
Preference number: 6 (lower is better)
Translates to: GSAGCSVALTLP*YQAQGRKRAWT
Trigger: CGTCCATGCCCGCTTTCTCCCCTGGGCCTGGTATCAAGGAAGAGTCAGTGCCACTGAGCATCCTGCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000476994.1
CDS TCA 72 bp TCAGTGTGTCCTCCACCTCAGTCTTCACGCCCTCCATaGGCACGTCTGTGTTCCCTCCACTGCCACAGGCCG +
Preference number: 6 (lower is better)
Translates to: SVCPPPQSSRPP*ARLCSLHCHRP
Trigger: CGGCCTGTGGCAGTGGAGGGAACACAGACGTGCTCATGGAGGGCGTGAAGACTGAGGTGGAGGACACACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395756.5
ENST00000395757.6
ENST00000469356.3
ENST00000487401.1
ENST00000580540.1
ENST00000583080.1
ENST00000662439.1
CDS GCA 72 bp AGGCAGCGGCTGCTGGGTGTTCCCGGGAGGGCTTCCTaGAGAAATAAAGCATGGGGCTGCAGACACAGACCT +
Preference number: 6 (lower is better)
Translates to: RQRLLGVPGRAS*RNKAWGCRHRP
Trigger: AGGTCTGTGTCTGCAGCCCCATGCTTTATTTCTGCAGGAAGCCCTCCCGGGAACACCCAGCAGCCGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 72 bp TCGATGGCCTTGCGCAAGACAGCAGATTTATTCAGCTaGACGGTGTGGGAGGGAGGGGGAGCGCACAGGTGG +
Preference number: 6 (lower is better)
Translates to: SMALRKTADLFS*TVWEGGGAHRW
Trigger: CCACCTGTGCGCTCCCCCTCCCTCCCACACCGTGCAGCTGAATAAATCTGCTGTCTTGCGCAAGGCCATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CCA 72 bp ACCCCCACAGCAACAACCCATGGCAGGGAGAAGGACTaGGGTGGCCAGAGACAGCCAGAGATTCAGGCGACA +
Preference number: 6 (lower is better)
Translates to: TPTATTHGREKD*GGQRQPEIQAT
Trigger: TGTCGCCTGAATCTCTGGCTGTCTCTGGCCACCCCAGTCCTTCTCCCTGCCATGGGTTGTTGCTGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584760.1
CDS GCA 72 bp CTGGCTACCACCAGGGGACCCTCACCATCCTCTTCCTaGTTTCTCTGCAACGAGCCAAACGTGGTGGTCTCG +
Preference number: 6 (lower is better)
Translates to: LATTRGPSPSSS*FLCNEPNVVVS
Trigger: CGAGACCACCACGTTTGGCTCGTTGCAGAGAAAGCAGGAAGAGGATGGTGAGGGTCCCCTGGTGGTAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS GCA 72 bp AATGTAAGATGCAGACAGCAGGGTCTGGCTAGCTGCTaGTGTGCCTGCCGCCATCTCAGGGAGGCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: NVRCRQQGLASC*CACRHLREAFP
Trigger: AGGGAAGGCCTCCCTGAGATGGCGGCAGGCACAGCAGCAGCTAGCCAGACCCTGCTGTCTGCATCTTACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CCA 72 bp GAAGGCTTCAAGAGAGGAGCTCAATGTGGCAGGAGGTaGAGACAAGCTGCCTGGGGAGCTGGTATCGGGGCT +
Preference number: 6 (lower is better)
Translates to: EGFKRGAQCGRR*RQAAWGAGIGA
Trigger: AGCCCCGATACCAGCTCCCCAGGCAGCTTGTCTCCACCTCCTGCCACATTGAGCTCCTCTCTTGAAGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000423161.3
ENST00000476994.1
ENST00000577897.2
CDS CAA 72 bp GGACCCCACGTGGCTCCAGGCCTCAGTTATTCTGTCTaGCTGTCCTCAAAGACTGGGCTGTCAGGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: GPHVAPGLSYSV*LSSKTGLSGSE
Trigger: CTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGCAAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000469356.3
CDS CAA 90 bp CTTACTGTGGGACCCCACGTGGCTCCAGGCCTCAGTTATTCTGTCTaGCTGTCCTCAAAGACTGGGCTGTCAGGCTCCGAGTCACTGCCA +
Preference number: 6 (lower is better)
Translates to: LTVGPHVAPGLSYSV*LSSKTGLSGSESLP
Trigger: TGGCAGTGACTCGGAGCCTGACAGCCCAGTCTTTGAGGACAGCAAGACAGAATAACTGAGGCCTGGAGCCACGTGGGGTCCCACAGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000469356.3
CDS TCA 72 bp CATGTGGCTTCCTATGGACAGTCCCTGCCTGGGCTCTaGTGCAAATGCACTGGCTTCAAGCCAGGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: HVASYGQSLPGL*CKCTGFKPGLQ
Trigger: CTGGAGGCCTGGCTTGAAGCCAGTGCATTTGCATCAGAGCCCAGGCAGGGACTGTCCATAGGAAGCCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS TCA 72 bp TTCAGTGCTCGCTCTAAGAGATGTTCCCGGAATAGCTaGGTCACCTGGGCCAGGGGGTCCACTGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FSARSKRCSRNS*VTWARGSTVER
Trigger: CCTCTCCACAGTGGACCCCCTGGCCCAGGTGACTCAGCTATTCCGGGAACATCTCTTAGAGCGAGCACTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581707.1
CDS GCA 72 bp TTCAGGACCAGAGGTAACCAAGGGACTAGAGCTGAATaGAGGGCTACAGCCAAGGGTGAGGTGGGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: FRTRGNQGTRAE*RATAKGEVGRA
Trigger: TGCCCTGCCCACCTCACCCTTGGCTGTAGCCCTGCATTCAGCTCTAGTCCCTTGGTTACCTCTGGTCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583080.1
CDS CCA 72 bp GCAATGCCACCAGGACAGAAAGCCACCCACAGGAGCTaGTGTTCCCGGACATACAGCCATTTTGCGAGCACC +
Preference number: 6 (lower is better)
Translates to: AMPPGQKATHRS*CSRTYSHFAST
Trigger: GGTGCTCGCAAAATGGCTGTATGTCCGGGAACACCAGCTCCTGTGGGTGGCTTTCTGTCCTGGTGGCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CCA 72 bp GGTGTTCCCGGGAGGGCTTCCTGCAGAAATAAAGCATaGGGCTGCAGACACAGACCTCCCTCTCCCACTTTC +
Preference number: 6 (lower is better)
Translates to: GVPGRASCRNKA*GCRHRPPSPTF
Trigger: GAAAGTGGGAGAGGGAGGTCTGTGTCTGCAGCCCCATGCTTTATTTCTGCAGGAAGCCCTCCCGGGAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 72 bp CAACCCTTGTTGGCACACAGCTGTATGTGTGGGCAATaGCACCAGGACAGAAAGCCACCCACAGGAGCTGGT +
Preference number: 6 (lower is better)
Translates to: QPLLAHSCMCGQ*HQDRKPPTGAG
Trigger: ACCAGCTCCTGTGGGTGGCTTTCTGTCCTGGTGGCATTGCCCACACATACAGCTGTGTGCCAACAAGGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 72 bp CAGGTCTCTATCACCGACTGGCCTTGGATGAGTCATTaGCCCATGTGGCTTCCTATGGACAGTCCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: QVSITDWPWMSH*PMWLPMDSPCL
Trigger: CAGGCAGGGACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS CCA 72 bp ATCACCGACTGGCCTTGGATGAGTCATTGCCCCATGTaGCTTCCTATGGACAGTCCCTGCCTGGGCTCTGAT +
Preference number: 6 (lower is better)
Translates to: ITDWPWMSHCPM*LPMDSPCLGSD
Trigger: ATCAGAGCCCAGGCAGGGACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS CAA 72 bp TCTGTCTTCATGGCTGTCAGAAGCAGCGAGTCTGCCTaGATGAAGTGGGGCTGCAGCAGGACCTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: SVFMAVRSSESA*MKWGCSRTCWI
Trigger: GATCCAGCAGGTCCTGCTGCAGCCCCACTTCATCAAGGCAGACTCGCTGCTTCTGACAGCCATGAAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423161.3
CDS TCA 72 bp TACTGCCTCAGGACCTTTGCACTTGTTCCTTCTACCTaGACCGTTCCTCGCCTAGTAGCACCCACCTCCCAG +
Preference number: 6 (lower is better)
Translates to: YCLRTFALVPST*TVPRLVAPTSQ
Trigger: CTGGGAGGTGGGTGCTACTAGGCGAGGAACGGTTCAGGTAGAAGGAACAAGTGCAAAGGTCCTGAGGCAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS TCA 72 bp ATTAGCCATCTGCCCATCAATCCCTGCATGTGCTTCTaGAAGCCCCAATGGGAACGAGAGGCACCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: ISHLPINPCMCF*KPQWEREAPRP
Trigger: AGGCCTGGGTGCCTCTCGTTCCCATTGGGGCTTTCAGAAGCACATGCAGGGATTGATGGGCAGATGGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584760.1
CDS GCA 72 bp CCACAGGAGCTGGTGTTCCCGGACATACAGCCATTTTaGGAGCACCTGTGCTGTCTAAAGCAATGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: PQELVFPDIQPF*EHLCCLKQCLL
Trigger: CAGCAGGCATTGCTTTAGACAGCACAGGTGCTCGCAAAATGGCTGTATGTCCGGGAACACCAGCTCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 72 bp GCTGCAGACACAGACCTCCCTCTCCCACTTTCAACCTaGTCTTCAGGTCTCTATCACCGACTGGCCTTGGAT +
Preference number: 6 (lower is better)
Translates to: AADTDLPLPLST*SSGLYHRLALD
Trigger: ATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAGGTTGAAAGTGGGAGAGGGAGGTCTGTGTCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 72 bp ACCAGGGGACCCTCACCATCCTCTTCCTGCTTTCTCTaGAACGAGCCAAACGTGGTGGTCTCGAGCACTTAT +
Preference number: 6 (lower is better)
Translates to: TRGPSPSSSCFL*NEPNVVVSSTY
Trigger: ATAAGTGCTCGAGACCACCACGTTTGGCTCGTTGCAGAGAAAGCAGGAAGAGGATGGTGAGGGTCCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CCA 72 bp CTGTGGGCCGAAAGGAACAGAGCCAGGAGTAAAGGCTaGATATGTGACCCCAAATCAGAGCCTAGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: LWAERNRARSKG*ICDPKSEPRPL
Trigger: CAAGGGCCTAGGCTCTGATTTGGGGTCACATATCCAGCCTTTACTCCTGGCTCTGTTCCTTTCGGCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583080.1
CDS CAA 72 bp CCCACAGGAGCTGGTGTTCCCGGACATACAGCCATTTaGCGAGCACCTGTGCTGTCTAAAGCAATGCCTGCT +
Preference number: 6 (lower is better)
Translates to: PTGAGVPGHTAI*RAPVLSKAMPA
Trigger: AGCAGGCATTGCTTTAGACAGCACAGGTGCTCGCAAAATGGCTGTATGTCCGGGAACACCAGCTCCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CAA 72 bp TCAGGTCTCTATCACCGACTGGCCTTGGATGAGTCATaGCCCCATGTGGCTTCCTATGGACAGTCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: SGLYHRLALDES*PHVASYGQSLP
Trigger: AGGCAGGGACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS CAA 90 bp CTCCCACTTTCAACCTGCTCTTCAGGTCTCTATCACCGACTGGCCTaGGATGAGTCATTGCCCCATGTGGCTTCCTATGGACAGTCCCTG +
Preference number: 6 (lower is better)
Translates to: LPLSTCSSGLYHRLA*DESLPHVASYGQSL
Trigger: CAGGGACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAGGTTGAAAGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS TCA 72 bp CTGCTCTTCAGGTCTCTATCACCGACTGGCCTTGGATaGGTCATTGCCCCATGTGGCTTCCTATGGACAGTC +
Preference number: 6 (lower is better)
Translates to: LLFRSLSPTGLG*VIAPCGFLWTV
Trigger: GACTGTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS GCA 72 bp GTGTTCCCGGACATACAGCCATTTTGCGAGCACCTGTaGTGTCTAAAGCAATGCCTGCTGCTGCGAGTGCAT +
Preference number: 6 (lower is better)
Translates to: VFPDIQPFCEHL*CLKQCLLLRVH
Trigger: ATGCACTCGCAGCAGCAGGCATTGCTTTAGACAGCACAGGTGCTCGCAAAATGGCTGTATGTCCGGGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CCA 72 bp AAGCAATGCCTGCTGCTGCGAGTGCATCACAATACCTaGACAAGGTGGGCACCACAAGGCTCACAATCTTGC +
Preference number: 6 (lower is better)
Translates to: KQCLLLRVHHNT*TRWAPQGSQSC
Trigger: GCAAGATTGTGAGCCTTGTGGTGCCCACCTTGTCCAGGTATTGTGATGCACTCGCAGCAGCAGGCATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CCA 72 bp ATTTGCACAACCCTTGTTGGCACACAGCTGTATGTGTaGGCAATGCCACCAGGACAGAAAGCCACCCACAGG +
Preference number: 6 (lower is better)
Translates to: ICTTLVGTQLYV*AMPPGQKATHR
Trigger: CCTGTGGGTGGCTTTCTGTCCTGGTGGCATTGCCCACACATACAGCTGTGTGCCAACAAGGGTTGTGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS CCA 72 bp CAACCTGCTCTTCAGGTCTCTATCACCGACTGGCCTTaGATGAGTCATTGCCCCATGTGGCTTCCTATGGAC +
Preference number: 6 (lower is better)
Translates to: QPALQVSITDWP*MSHCPMWLPMD
Trigger: GTCCATAGGAAGCCACATGGGGCAATGACTCATCCAAGGCCAGTCGGTGATAGAGACCTGAAGAGCAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395751.8
ENST00000662439.1
CDS CAA 72 bp GCGGAGCTGCTTTGCAACATTACTGCCTCAGGACCTTaGCACTTGTTCCTTCTACCTGAACCGTTCCTCGCC +
Preference number: 6 (lower is better)
Translates to: AELLCNITASGP*HLFLLPEPFLA
Trigger: GGCGAGGAACGGTTCAGGTAGAAGGAACAAGTGCAAAGGTCCTGAGGCAGTAATGTTGCAAAGCAGCTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS GCA 72 bp CAGCCATTTTGCGAGCACCTGTGCTGTCTAAAGCAATaGCTGCTGCTGCGAGTGCATCACAATACCTGGACA +
Preference number: 6 (lower is better)
Translates to: QPFCEHLCCLKQ*LLLRVHHNTWT
Trigger: TGTCCAGGTATTGTGATGCACTCGCAGCAGCAGGCATTGCTTTAGACAGCACAGGTGCTCGCAAAATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395751.8
CDS GCA 72 bp GAGGCCAGACTGGAGCTCAATAAAGCCAGGACTCACTaGTTTTGTGGACAGCAGTGCGCAGACTTAGGTTCT +
Preference number: 6 (lower is better)
Translates to: EARLELNKARTH*FCGQQCADLGS
Trigger: AGAACCTAAGTCTGCGCACTGCTGTCCACAAAAGCAGTGAGTCCTGGCTTTATTGAGCTCCAGTCTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470247.1
CDS GCA 72 bp CGGAGCTGCTTTGCAACATTACTGCCTCAGGACCTTTaGACTTGTTCCTTCTACCTGAACCGTTCCTCGCCT +
Preference number: 6 (lower is better)
Translates to: RSCFATLLPQDL*TCSFYLNRSSP
Trigger: AGGCGAGGAACGGTTCAGGTAGAAGGAACAAGTGCAAAGGTCCTGAGGCAGTAATGTTGCAAAGCAGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CCA 72 bp CCTCTTCCTGCTTTCTCTGCAACGAGCCAAACGTGGTaGTCTCGAGCACTTATTCATCCTGCCTACTGTCCA +
Preference number: 6 (lower is better)
Translates to: PLPAFSATSQTW*SRALIHPAYCP
Trigger: TGGACAGTAGGCAGGATGAATAAGTGCTCGAGACCACCACGTTTGGCTCGTTGCAGAGAAAGCAGGAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CCA 72 bp CATCCTCTTCCTGCTTTCTCTGCAACGAGCCAAACGTaGTGGTCTCGAGCACTTATTCATCCTGCCTACTGT +
Preference number: 6 (lower is better)
Translates to: HPLPAFSATSQT*WSRALIHPAYC
Trigger: ACAGTAGGCAGGATGAATAAGTGCTCGAGACCACCACGTTTGGCTCGTTGCAGAGAAAGCAGGAAGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS GCA 72 bp CTTTTGTGGACAGCAGTGCGCAGACTTAGGTTCTCCTaGTTGAGTTTCTGGTTGCTGTGTTGCAGAAAGCGA +
Preference number: 6 (lower is better)
Translates to: LLWTAVRRLRFS*LSFWLLCCRKR
Trigger: TCGCTTTCTGCAACACAGCAACCAGAAACTCAAGCAGGAGAACCTAAGTCTGCGCACTGCTGTCCACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000469356.3
ENST00000470247.1
ENST00000487401.1
ENST00000662439.1
CDS GCA 72 bp TGCTGTGTTGCAGAAAGCGAATGTAGTCGATGGCCTTaGGCAAGACAGCAGATTTATTCAGCTGCACGGTGT +
Preference number: 6 (lower is better)
Translates to: CCVAESECSRWP*ARQQIYSAARC
Trigger: ACACCGTGCAGCTGAATAAATCTGCTGTCTTGCGCAAGGCCATCGACTACATTCGCTTTCTGCAACACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469356.3
CDS CAA 72 bp TTGTGGACAGCAGTGCGCAGACTTAGGTTCTCCTGCTaGAGTTTCTGGTTGCTGTGTTGCAGAAAGCGAATG +
Preference number: 6 (lower is better)
Translates to: LWTAVRRLRFSC*SFWLLCCRKRM
Trigger: CATTCGCTTTCTGCAACACAGCAACCAGAAACTCAAGCAGGAGAACCTAAGTCTGCGCACTGCTGTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000469356.3
ENST00000470247.1
ENST00000487401.1
ENST00000662439.1
CDS GCA 72 bp TGCTGTGTTGCAGAAAGCGAATGTAGTCGATGGCCTTaGGCAAGACAGCAGATTTATTCAGCTTTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: CCVAESECSRWP*ARQQIYSALPQ
Trigger: CTGAGGCAAAGCTGAATAAATCTGCTGTCTTGCGCAAGGCCATCGACTACATTCGCTTTCTGCAACACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261646.11
ENST00000355815.8
ENST00000395751.8
ENST00000395757.6
ENST00000470247.1
ENST00000662439.1