RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRD5A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000145545

Ensembl transcript IDs: ENST00000274192.7, ENST00000504286.1, ENST00000510531.5

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTCTGCCACATCAGGCCCATCTCCACCCGTGCTGTGGTCCATCTaGAGTGGTGACTCTCTCTCACTCTCTTTATGGGGCCACTCCCCC +
Preference number: 1 (lower is better)
Translates to: CSATSGPSPPVLWSI*SGDSLSLSLWGHSP
Trigger: GGGGGAGTGGCCCCATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAGATGGGCCTGATGTGGCAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp TGGCCTCTCTGCTCTGCCACATCAGGCCCATCTCCACCCGTGCTGTaGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCTTTATGGGGC +
Preference number: 1 (lower is better)
Translates to: WPLCSATSGPSPPVL*SICSGDSLSLSLWG
Trigger: GCCCCATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAGATGGGCCTGATGTGGCAGAGCAGAGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 90 bp CACATCAGGCCCATCTCCACCCGTGCTGTGGTCCATCTGCAGTGGTaGCTCTCTCTCACTCTCTTTATGGGGCCACTCCCCCACCTAAAT +
Preference number: 1 (lower is better)
Translates to: HIRPISTRAVVHLQW*LSLTLFMGPLPHLN
Trigger: ATTTAGGTGGGGGAGTGGCCCCATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAGATGGGCCTGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 90 bp TGGGCTCTCTGTGCTCTCCCTGGAGAGTGGGGGTGCAGAGGACACTaGTTTCTGCTGCAGGCGCCATGTTTAGTTGGTCTCACTTTGAGA +
Preference number: 1 (lower is better)
Translates to: WALCALPGEWGCRGH*FLLQAPCLVGLTLR
Trigger: TCTCAAAGTGAGACCAACTAAACATGGCGCCTGCAGCAGAAAGCAGTGTCCTCTGCACCCCCACTCTCCAGGGAGAGCACAGAGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp CGGAAGGAGAGAAATGGGCTTTTGGGTTCCAAGTTCTGTCAGTGTTaGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGGGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: RKERNGLLGSKFCQC*VTEVVHRGLSEGEA
Trigger: GGCTTCTCCCTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGAACCCAAAAGCCCATTTCTCTCCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 90 bp AGGAGAGAAATGGGCTTTTGGGTTCCAAGTTCTGTCAGTGTTGGGTaGCTGAAGTCGTGCACAGAGGCCTCTCTGAGGGAGAAGCCATGG +
Preference number: 1 (lower is better)
Translates to: RREMGFWVPSSVSVG*LKSCTEASLREKPW
Trigger: CCATGGCTTCTCCCTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGAACCCAAAAGCCCATTTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 90 bp GAGGCATGCCACTCCAAAGAAGTAACTGCCCTCAGTGAGACTGCATaGACAGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGC +
Preference number: 1 (lower is better)
Translates to: EACHSKEVTALSETA*TEAGGCWPKIINGS
Trigger: GCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCTGTTCATGCAGTCTCACTGAGGGCAGTTACTTCTTTGGAGTGGCATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 90 bp TATCTGCTCAGAGGCATGCCACTCCAAAGAAGTAACTGCCCTCAGTaGGACTGCATGAACAGAGGCTGGTGGCTGTTGGCCCAAGATCAT +
Preference number: 1 (lower is better)
Translates to: YLLRGMPLQRSNCPQ*DCMNRGWWLLAQDH
Trigger: ATGATCTTGGGCCAACAGCCACCAGCCTCTGTTCATGCAGTCTCACTGAGGGCAGTTACTTCTTTGGAGTGGCATGCCTCTGAGCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 90 bp TCTTCCCAAGTGGCTCCACCACTTTGCATCCCCACCAGCCGTGAATaGGAGTTCCTGTTGCTCCACATTCTCACTAGCATTGGTGATGTC +
Preference number: 1 (lower is better)
Translates to: SSQVAPPLCIPTSRE*EFLLLHILTSIGDV
Trigger: GACATCACCAATGCTAGTGAGAATGTGGAGCAACAGGAACTCTCATTCACGGCTGGTGGGGATGCAAAGTGGTGGAGCCACTTGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 90 bp TGCTTTCTGCTGCAGGCGCCATGTTTAGTTGGTCTCACTTTGAGATaGTCATTTCCCTCTGCCTTCTGTCAGCCCAGATGTGAGGACCCA +
Preference number: 1 (lower is better)
Translates to: CFLLQAPCLVGLTLR*SFPSAFCQPRCEDP
Trigger: TGGGTCCTCACATCTGGGCTGACAGAAGGCAGAGGGAAATGAGCATCTCAAAGTGAGACCAACTAAACATGGCGCCTGCAGCAGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp CCCGGCTACGTGAAGCCTTTGAGAGCAGATTTTGCTGCTTTGCAGTaGGGGAAGCAACTAACTCAGACTGTCAATTACCTTACAAAGAGC +
Preference number: 1 (lower is better)
Translates to: PGYVKPLRADFAALQ*GKQLTQTVNYLTKS
Trigger: GCTCTTTGTAAGGTAATTGACAGTCTGAGTTAGTTGCTTCCCCCACTGCAAAGCAGCAAAATCTGCTCTCAAAGGCTTCACGTAGCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 90 bp GGTTCTCATCTCATTCAGGCCAGGACCCCTAGGAAGACTTCATACTaGTTTACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGA +
Preference number: 1 (lower is better)
Translates to: GSHLIQARTPRKTSY*FTAKHVLASKCAFR
Trigger: TCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGTAAATCAGTATGAAGTCTTCCTAGGGGTCCTGGCCTGAATGAGATGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR CCA 90 bp AGATGTTGGCATGCATGCGGCAATCATGGAACACTTCCACACTGCTaGTGGGAATGTAAACTATTAGAGCCACCATGGAAAACAGTGTGG +
Preference number: 1 (lower is better)
Translates to: RCWHACGNHGTLPHC*WECKLLEPPWKTVW
Trigger: CCACACTGTTTTCCATGGTGGCTCTAATAGTTTACATTCCCACCAGCAGTGTGGAAGTGTTCCATGATTGCCGCATGCATGCCAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp GGACCCCTAGGAAGACTTCATACTGATTTACAGCAAAGCACGTGTTaGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTGAGGTGG +
Preference number: 1 (lower is better)
Translates to: GPLGRLHTDLQQSTC*PVSVHSDVVSSVRW
Trigger: CCACCTCACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGTAAATCAGTATGAAGTCTTCCTAGGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR CCA 90 bp ATGCACAAATGCATGCACCGCTGGCCTTGGAGACTAAGGAGGAGATaGGTACAACTATTGTTCTCTGCCTCATTGGATTTTAGCTTTGGT +
Preference number: 1 (lower is better)
Translates to: MHKCMHRWPWRLRRR*VQLLFSASLDFSFG
Trigger: ACCAAAGCTAAAATCCAATGAGGCAGAGAACAATAGTTGTACCCATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCATGCATTTGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp TGTTGGCATGCATGCGGCAATCATGGAACACTTCCACACTGCTGGTaGGAATGTAAACTATTAGAGCCACCATGGAAAACAGTGTGGAAA +
Preference number: 1 (lower is better)
Translates to: CWHACGNHGTLPHCW*ECKLLEPPWKTVWK
Trigger: TTTCCACACTGTTTTCCATGGTGGCTCTAATAGTTTACATTCCCACCAGCAGTGTGGAAGTGTTCCATGATTGCCGCATGCATGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp TGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTGAGGTaGGTATTCTCCTGGAAGCTGCAGTGTTGCCAAGCAATGAATAAG +
Preference number: 1 (lower is better)
Translates to: CWPVSVHSDVVSSVR*VFSWKLQCCQAMNK
Trigger: CTTATTCATTGCTTGGCAACACTGCAGCTTCCAGGAGAATACCCACCTCACTGATGACACAACATCTGAATGCACACTTACTGGCCAACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR CCA 90 bp TCCTGTTGCTCCACATTCTCACTAGCATTGGTGATGTCAGTCTTCTaGATTTTGGCCATTCTGATAGGTGTGTGGTGGTACTGTTGTTTC +
Preference number: 1 (lower is better)
Translates to: SCCSTFSLALVMSVF*ILAILIGVWWYCCF
Trigger: GAAACAACAGTACCACCACACACCTATCAGAATGGCCAAAATCCAGAAGACTGACATCACCAATGCTAGTGAGAATGTGGAGCAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 90 bp TCTACTAGATTGTTTAGTAAGAGTATGTTTACCTTTTTAGGAATCTaGCAGACTGTCTTCCCAAGTGGCTCCACCACTTTGCATCCCCAC +
Preference number: 1 (lower is better)
Translates to: STRLFSKSMFTFLGI*QTVFPSGSTTLHPH
Trigger: GTGGGGATGCAAAGTGGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACTCTTACTAAACAATCTAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 90 bp AAAAGATACTTGCACGCACATGTTTATAGCAGCACAATTCACAACTaGAAAATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTG +
Preference number: 1 (lower is better)
Translates to: KRYLHAHVYSSTIHN*KIVEPTQMPISQQV
Trigger: CACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATTTTGCAGTTGTGAATTGTGCTGCTATAAACATGTGCGTGCAAGTATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 90 bp TGGGCTGTTTCAATATCTAGTTTGACATTGATTATTGGAATTATCTaGTCAGAGGCATGCCACTCCAAAGAAGTAACTGCCCTCAGTGAG +
Preference number: 1 (lower is better)
Translates to: WAVSISSLTLIIGII*SEACHSKEVTALSE
Trigger: CTCACTGAGGGCAGTTACTTCTTTGGAGTGGCATGCCTCTGAGCAGATAATTCCAATAATCAATGTCAAACTAGATATTGAAACAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 90 bp ATTTGCAATCCCCTAATGTCATATGATGCTGAGCATGTTATCATATaGTTGGCACTCAGTTTTGTTTCCCTTTCCTTCATGGGCCTGATG +
Preference number: 1 (lower is better)
Translates to: ICNPLMSYDAEHVII*LALSFVSLSFMGLM
Trigger: CATCAGGCCCATGAAGGAAAGGGAAACAAAACTGAGTGCCAAGCATATGATAACATGCTCAGCATCATATGACATTAGGGGATTGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp ACACTTCCACACTGCTGGTGGGAATGTAAACTATTAGAGCCACCATaGAAAACAGTGTGGAAATTCCTTAGAACTAAAAGTAGAACTACC +
Preference number: 1 (lower is better)
Translates to: TLPHCWWECKLLEPP*KTVWKFLRTKSRTT
Trigger: GGTAGTTCTACTTTTAGTTCTAAGGAATTTCCACACTGTTTTCCATGGTGGCTCTAATAGTTTACATTCCCACCAGCAGTGTGGAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp TTGATCAATATCTTAAGAAAGGTGGTTAAGCTTTGGTTACAGCAATaGCCGATAGAGAAGATTATGGCTGTATCAGACACAAGTGAGGGT +
Preference number: 1 (lower is better)
Translates to: LINILRKVVKLWLQQ*PIEKIMAVSDTSEG
Trigger: ACCCTCACTTGTGTCTGATACAGCCATAATCTTCTCTATCGGCCATTGCTGTAACCAAAGCTTAACCACCTTTCTTAAGATATTGATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 90 bp GCAATGATCTGGTTGATCAATATCTTAAGAAAGGTGGTTAAGCTTTaGTTACAGCAATGGCCGATAGAGAAGATTATGGCTGTATCAGAC +
Preference number: 1 (lower is better)
Translates to: AMIWLINILRKVVKL*LQQWPIEKIMAVSD
Trigger: GTCTGATACAGCCATAATCTTCTCTATCGGCCATTGCTGTAACCAAAGCTTAACCACCTTTCTTAAGATATTGATCAACCAGATCATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 90 bp ACTCCTCACCTTGAGAAGTTTACAGCTGTGTTGGGTAGACAAAATTaGTATATAGACAACAGCAGGGATAGCCAACATTTGCAAATAATA +
Preference number: 1 (lower is better)
Translates to: TPHLEKFTAVLGRQN*YIDNSRDSQHLQII
Trigger: TATTATTTGCAAATGTTGGCTATCCCTGCTGTTGTCTATATATCAATTTTGTCTACCCAACACAGCTGTAAACTTCTCAAGGTGAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 90 bp ATAGCAGCACAATTCACAACTGCAAAATCGTGGAACCAACCCAAATaGCCATCAGTCAACAAGTGGTATATATATATATACAATGGAATA +
Preference number: 1 (lower is better)
Translates to: IAAQFTTAKSWNQPK*PSVNKWYIYIYNGI
Trigger: TATTCCATTGTATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATTTTGCAGTTGTGAATTGTGCTGCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTGGGTGCAGAGGACACTaGTTTCTGCTGCAGGCGCCA +
Preference number: 2 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSGCRGH*FLLQAP
Trigger: TGGCGCCTGCAGCAGAAAGCAGTGTCCTCTGCACCC...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTAAATGCATGCACCGCTaGCCTTGGAGACTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSKCMHR*PWRLRR
Trigger: CCTCCTTAGTCTCCAAGGCCAGCGGTGCATGCATTT...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp GGTAACCAGCCATTATGGGGCAGGATCCCTATAGGCCAAAATGTGGAGACTTTAGGTCTCCGCAGGGTGTaGACTGTCATGGCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: GNQPLWGRIPIGQNVETLGLRRV*TVMASL
Trigger: CAGAGAGGCCATGACAGTGCACACCCTGCGGAGACC...TAAAGTCTCCACATTTTGGCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp GGTAACCAGCCATTATGGGGCAGGATCCCTATAGGCCAAAATGTGGAGACTTTACTGTCATGGCCTCTCTaGTCTGCCACATCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GNQPLWGRIPIGQNVETLLSWPL*SATSGP
Trigger: TGGGCCTGATGTGGCAGAGCAGAGAGGCCATGACAG...TAAAGTCTCCACATTTTGGCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCCCCACCAGCCGTGAATaGGAGTTCCTGTTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTPTSRE*EFLLLH
Trigger: GTGGAGCAACAGGAACTCTCATTCACGGCTGGTGGG...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGGCCATGACTGCACAATaGCTACCCCCAGCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: NSRDSQHLQIIMQQLGREAMTAQ*LPPASV
Trigger: CACAGAGGCTGGGGGTAGCCATTGTGCAGTCATGGC...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGCCACCTAAATTCCTTTaGGGTGATTTCAACTGGGGT +
Preference number: 2 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSEPPKFL*GDFNWG
Trigger: ACCCCAGTTGAAATCACCTCAAAGGAATTTAGGTGG...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGTCAGTGTTGGGTGACTaGAGTCGTGCACAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: NSRDSQHLQIIMQQLGRESVLGD*SRAQRP
Trigger: AGGCCTCTGTGCACGACTTCAGTCACCCAACACTGA...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTGCAAATGTTGTTGAATaGACAAATGCATGCACCGCT +
Preference number: 2 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSANVVE*TNACTA
Trigger: AGCGGTGCATGCATTTGTGCATTCAACAACATTTGC...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 90 bp GCTTGGCAAATGTTGTTGAATGCACAAATGCATGCACCGCTGGCCTaGGAGACTAAGGAGGAGATGGGTACAACTATTGTTCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: AWQMLLNAQMHAPLA*ETKEEMGTTIVLCL
Trigger: GAGGCAGAGAACAATAGTTGTACCCATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCATGCATTTGTGCATTCAACAACATTTGCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTAGTAGAACTACCATTTaGTCCAGCAATCCCATTACT +
Preference number: 2 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSSRTTI*SSNPIT
Trigger: AGTAATGGGATTGCTGGATCAAATGGTAGTTCTACT...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCGGTAACCAGCCATTATaGGGCAGGATCCCTATAGGC +
Preference number: 2 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTGNQPL*GRIPIG
Trigger: GCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGGTCCATCTGCAGTGGTaGCTCTCTCTCACTCTCTTT +
Preference number: 2 (lower is better)
Translates to: NSRDSQHLQIIMQQLGREVHLQW*LSLTLF
Trigger: AAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGAC...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATACTGTCAGCCCAGATGTaGGGACCCAGGGTCTCCGCA +
Preference number: 2 (lower is better)
Translates to: IVEPTQMPISQQVVYIYILSAQM*GPRVSA
Trigger: TGCGGAGACCCTGGGTCCTCACATCTGGGCTGACAG...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCACATCCCCACCAGCCGTaGATGAGAGTTCCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: FTALKFVCILPVHPSLHPHPHQP*MRVPVA
Trigger: AGCAACAGGAACTCTCATTCACGGCTGGTGGGGATG...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGCTCATCAGATTTAACTaGAAGCTCTCAAGGCTACTT +
Preference number: 2 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSELIRFN*KLSRLL
Trigger: AAGTAGCCTTGAGAGCTTCCAGTTAAATCTGATGAG...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCACCGGCAATGGGCACATaGCTCATTTCTGGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAPAMGT*LISGLS
Trigger: AGAGAGCCCAGAAATGAGCCATGTGCCCATTGCCGG...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAATGCACCGCTGGCCTTaGAGACTAAGGAGGAGATGG +
Preference number: 2 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAMHRWP*RLRRRW
Trigger: CCATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCAT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 90 bp ATGCACCGCTGGCCTTGGAGACTAAGGAGGAGATGGGTACAACTATaGTTCTCTGCCTCATTGGATTTTAGCTTTGGTCATGATAGCAGT +
Preference number: 2 (lower is better)
Translates to: MHRWPWRLRRRWVQL*FSASLDFSFGHDSS
Trigger: ACTGCTATCATGACCAAAGCTAAAATCCAATGAGGCAGAGAACAATAGTTGTACCCATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGAACAGGTACAGGCTATaGGGGGAAAGCTTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: NSRDSQHLQIIMQQLGRENRYRL*GESFAK
Trigger: CTTTGCAAAGCTTTCCCCTCATAGCCTGTACCTGTT...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCAGTGCTGTGGTCCATCTaGAGTGGTGACTCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: FTALKFVCILPVHPSLHPVLWSI*SGDSLS
Trigger: TGAGAGAGAGTCACCACTGCAGATGGACCACAGCAC...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTCAGCACCCACTGCTGTaGTTGATATACAGTAAGTGC +
Preference number: 2 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFQHPLL*LIYSKC
Trigger: GCACTTACTGTATATCAAGCACAGCAGTGGGTGCTG...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp AATTTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGGGTGTGCACTGTCATaGCCTCTCTGCTCTGCCACA +
Preference number: 2 (lower is better)
Translates to: NFFIRPPIEGHLGCFQFLGCALS*PLCSAT
Trigger: TGTGGCAGAGCAGAGAGGCCATGACAGTGCACACCC...CAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATTCTCTGTGCTCTCCCTaGAGAGTGGGGGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYSLCSP*RVGVQR
Trigger: CCTCTGCACCCCCACTCTCCAGGGAGAGCACAGAGA...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 90 bp TGGAGACTAAGGAGGAGATGGGTACAACTATTGTTCTCTGCCTCATaGGATTTTAGCTTTGGTCATGATAGCAGTTGGCTGTGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: WRLRRRWVQLLFSAS*DFSFGHDSSWLWSS
Trigger: GGAAGACCACAGCCAACTGCTATCATGACCAAAGCTAAAATCCAATGAGGCAGAGAACAATAGTTGTACCCATCTCCTCCTTAGTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGGCCCATCTCCACCCGTaGTGTGGTCCATCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRAHLHP*CGPSAV
Trigger: CACTGCAGATGGACCACAGCACGGGTGGAGATGGGC...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGGGAACACTTCCACACTaGTGGTGGGAATGTAAACTA +
Preference number: 2 (lower is better)
Translates to: NSRDSQHLQIIMQQLGREGTLPH*WWECKL
Trigger: TAGTTTACATTCCCACCAGCAGTGTGGAAGTGTTCC...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTACAACTGCAAAATCGTaGAACCAACCCAAATGCCCA +
Preference number: 2 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFTTAKS*NQPKCP
Trigger: TGGGCATTTGGGTTGGTTCCACGATTTTGCAGTTGT...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 90 bp GGAGATGGGTACAACTATTGTTCTCTGCCTCATTGGATTTTAGCTTaGGTCATGATAGCAGTTGGCTGTGGTCTTCCTACAGATAACAGC +
Preference number: 2 (lower is better)
Translates to: GDGYNYCSLPHWILA*VMIAVGCGLPTDNS
Trigger: GCTGTTATCTGTAGGAAGACCACAGCCAACTGCTATCATGACCAAAGCTAAAATCCAATGAGGCAGAGAACAATAGTTGTACCCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp AATTTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGTCTGTCAGTGTTGGGTaGCTGAAGTCGTGCACAGAG +
Preference number: 2 (lower is better)
Translates to: NFFIRPPIEGHLGCFQFLSVSVG*LKSCTE
Trigger: CTCTGTGCACGACTTCAGTCACCCAACACTGACAGA...CAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCTTTAGTGGTGATTTGTaGGATCCTGGTGCACCCATC +
Preference number: 2 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTFSGDL*DPGAPI
Trigger: GATGGGTGCACCAGGATCTCACAAATCACCACTAAA...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp AATTTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGAATGCACAAATGCATaGACCGCTGGCCTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: NFFIRPPIEGHLGCFQFLECTNA*TAGLGD
Trigger: GTCTCCAAGGCCAGCGGTGCATGCATTTGTGCATTC...CAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCAAGTTCTGTCAGTGTTaGGTGACTGAAGTCGTGCAC +
Preference number: 2 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTKFCQC*VTEVVH
Trigger: GTGCACGACTTCAGTCACCCAACACTGACAGAACTT...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTAAGGTGGTTAAGCTTTaGTTACAGCAATGGCCGATA +
Preference number: 2 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFKVVKL*LQQWPI
Trigger: TATCGGCCATTGCTGTAACCAAAGCTTAACCACCTT...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCATTTGCTGCTTTGCAGTaGGGGAAGCAACTAACTCAG +
Preference number: 2 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAFAALQ*GKQLTQ
Trigger: CTGAGTTAGTTGCTTCCCCCACTGCAAAGCAGCAAA...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAAGATGTTGGCATGCATaGGGCAATCATGGAACACTT +
Preference number: 2 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLARCWHA*GNHGTL
Trigger: AAGTGTTCCATGATTGCCGCATGCATGCCAACATCT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATATCTCTTCCCCGGCAATaGGCACATGGCTCATTTCTG +
Preference number: 2 (lower is better)
Translates to: IVEPTQMPISQQVVYIYISLPRQ*AHGSFL
Trigger: CAGAAATGAGCCATGTGCCCATTGCCGGGGAAGAGA...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAACGGAAGGAGAGAAATaGGCTTTTGGGTTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLATEGEK*AFGFQV
Trigger: AACTTGGAACCCAAAAGCCCATTTCTCTCCTTCCGT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATAGGTGGGTATTCTCCTaGAAGCTGCAGTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: VICFHSDHVRQGKVIISHRWVFS*KLQCCQ
Trigger: TTGGCAACACTGCAGCTTCCAGGAGAATACCCACCT...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR-3UTR GCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCATTGTACCATTCTTATaGCTTTGTGTCCTCATAGCT +
Preference number: 2 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTIVPFL*LCVLIA
Trigger: AGCTATGAGGACACAAAGGCATAAGAATGGTACAAT...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATCAGCAAAGCACGTGTTaGCCAGTAAGTGTGCATTCA +
Preference number: 2 (lower is better)
Translates to: VICFHSDHVRQGKVIISHQQSTC*PVSVHS
Trigger: TGAATGCACACTTACTGGCCAACACGTGCTTTGCTG...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR-3UTR CCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATATAGTAGTGTCATGCTaGCTGTGCATCCTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: VICFHSDHVRQGKVIISHIVVSC*LCILKP
Trigger: TGGCTTGAGGATGCACAGCCAGCATGACACTACTAT...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR-3UTR GCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAGGTCTCACTTTGAGATaGTCATTTCCCTCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: IVEPTQMPISQQVVYIYIGLTLR*SFPSAF
Trigger: GAAGGCAGAGGGAAATGAGCATCTCAAAGTGAGACC...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAGGCGCCATGTTTAGTTaGTCTCACTTTGAGATGCTC +
Preference number: 2 (lower is better)
Translates to: IVEPTQMPISQQVVYIYIGAMFS*SHFEML
Trigger: GAGCATCTCAAAGTGAGACCAACTAAACATGGCGCC...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATGGTCATGATAGCAGTTaGCTGTGGTCTTCCTACAGA +
Preference number: 2 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYGHDSS*LWSSYR
Trigger: TCTGTAGGAAGACCACAGCCAACTGCTATCATGACC...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAATGGCCAACAAAGTATaGAAAAATGCTCAACATCAC +
Preference number: 2 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAMANKV*KNAQHH
Trigger: GTGATGTTGAGCATTTTTTCATACTTTGTTGGCCAT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAAGTGGGTTAAGGACATaGATAGACAATTCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLASGLRT*IDNSQK
Trigger: CTTTTGAGAATTGTCTATTCATGTCCTTAACCCACT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATATAATAGTAGTGTCATaGTGGCTGTGCATCCTCAAG +
Preference number: 2 (lower is better)
Translates to: VICFHSDHVRQGKVIISHIIVVS*WLCILK
Trigger: CTTGAGGATGCACAGCCAGCATGACACTACTATTAT...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR-3UTR CCA 90 bp AATTTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGCTTCCACACTGCTGGTaGGAATGTAAACTATTAGAG +
Preference number: 2 (lower is better)
Translates to: NFFIRPPIEGHLGCFQFLLPHCW*ECKLLE
Trigger: CTCTAATAGTTTACATTCCCACCAGCAGTGTGGAAG...CAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 90 bp CCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAATTTaGAGTAAAGCTGCTATAAACATTCATGTGCAGGTTTTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: PPIEGHLGCFQFLAI*SKAAINIHVQVFCV
Trigger: CACACAGAAAACCTGCACATGAATGTTTATAGCAGCTTTACTCAAAATTGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 90 bp TTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTaGGCAATTTTGAGTAAAGCTGCTATAAACATTCATGTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: FIRPPIEGHLGCFQF*AILSKAAINIHVQV
Trigger: AACCTGCACATGAATGTTTATAGCAGCTTTACTCAAAATTGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR GCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAAAACTAAAGAGCTTTTaGATGGTAAAAGCAACAGTC +
Preference number: 2 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAKLKSF*MVKATV
Trigger: GACTGTTGCTTTTACCATGCAAAAGCTCTTTAGTTT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp AATTTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGTGCAGGTTTTCTGTGTaGACATGTTTTCAACTCCTT +
Preference number: 2 (lower is better)
Translates to: NFFIRPPIEGHLGCFQFLCRFSV*TCFQLL
Trigger: AAGGAGTTGAAAACATGTCCACACAGAAAACCTGCA...CAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 90 bp AACATTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTaGGGTAAACACCTAGGAGCAAATCTACTAGATTGTTTAGTAAGA +
Preference number: 2 (lower is better)
Translates to: NIHVQVFCVDMFSTP*GKHLGANLLDCLVR
Trigger: TCTTACTAAACAATCTAGTAGATTTGCTCCTAGGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGCTTGGCAAATGTTGTTaGATGCACAAATGCATGCAC +
Preference number: 2 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRLGKCC*MHKCMH
Trigger: GTGCATGCATTTGTGCATTCAACAACATTTGCCAAG...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGAGACAACGCACAGAGTaGGAGAAAATCTTCACAATC +
Preference number: 2 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRRQRTE*EKIFTI
Trigger: GATTGTGAAGATTTTCTCCCACTCTGTGCGTTGTCT...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR TCA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATGTAGAATTCAAGTCATaGAGCATTCAACAGGAAGAT +
Preference number: 2 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYVEFKS*SIQQED
Trigger: ATCTTCCTGTTGAATGCTTCATGACTTGAATTCTAC...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGCTTTGGTTACAGCAATaGCCGATAGAGAAGATTATG +
Preference number: 2 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRLWLQQ*PIEKIM
Trigger: CATAATCTTCTCTATCGGCCATTGCTGTAACCAAAG...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CCA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGACACTTCCACACTGCTaGTGGGAATGTAAACTATTA +
Preference number: 2 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRTLPHC*WECKLL
Trigger: TAATAGTTTACATTCCCACCAGCAGTGTGGAAGTGT...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 72 bp AGGGTCTCCGCAGGGTGTGCACTGTCATGGCCTCTCTaGTCTGCCACATCAGGCCCATCTCCACCCGTGCTG +
Preference number: 3 (lower is better)
Translates to: RVSAGCALSWPL*SATSGPSPPVL
Trigger: CAGCACGGGTGGAGATGGGCCTGATGTGGCAGAGCAGAGAGGCCATGACAGTGCACACCCTGCGGAGACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp CTTCTCTTCCCCGGCAATGGGCACATGGCTCATTTCTaGGCTCTCTGTGCTCTCCCTGGAGAGTGGGGGTGC +
Preference number: 3 (lower is better)
Translates to: LLFPGNGHMAHF*ALCALPGEWGC
Trigger: GCACCCCCACTCTCCAGGGAGAGCACAGAGAGCCCAGAAATGAGCCATGTGCCCATTGCCGGGGAAGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 72 bp CCCATCTCCACCCGTGCTGTGGTCCATCTGCAGTGGTaGCTCTCTCTCACTCTCTTTATGGGGCCACTCCCC +
Preference number: 3 (lower is better)
Translates to: PISTRAVVHLQW*LSLTLFMGPLP
Trigger: GGGGAGTGGCCCCATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp TGCTCTGCCACATCAGGCCCATCTCCACCCGTGCTGTaGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCT +
Preference number: 3 (lower is better)
Translates to: CSATSGPSPPVL*SICSGDSLSLS
Trigger: AGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAGATGGGCCTGATGTGGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTCATGCACCGCTGGCCTaGGAGACTAAGGAGGAGATG +
Preference number: 3 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSHAPLA*ETKEEM
Trigger: CATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCATG...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 72 bp ACATCAGGCCCATCTCCACCCGTGCTGTGGTCCATCTaGAGTGGTGACTCTCTCTCACTCTCTTTATGGGGC +
Preference number: 3 (lower is better)
Translates to: TSGPSPPVLWSI*SGDSLSLSLWG
Trigger: GCCCCATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAGATGGGCCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 72 bp AGAGGCATGCCACTCCAAAGAAGTAACTGCCCTCAGTaGGACTGCATGAACAGAGGCTGGTGGCTGTTGGCC +
Preference number: 3 (lower is better)
Translates to: RGMPLQRSNCPQ*DCMNRGWWLLA
Trigger: GGCCAACAGCCACCAGCCTCTGTTCATGCAGTCTCACTGAGGGCAGTTACTTCTTTGGAGTGGCATGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 72 bp GTGGCTCCACCACTTTGCATCCCCACCAGCCGTGAATaGGAGTTCCTGTTGCTCCACATTCTCACTAGCATT +
Preference number: 3 (lower is better)
Translates to: VAPPLCIPTSRE*EFLLLHILTSI
Trigger: AATGCTAGTGAGAATGTGGAGCAACAGGAACTCTCATTCACGGCTGGTGGGGATGCAAAGTGGTGGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 72 bp CACTCCAAAGAAGTAACTGCCCTCAGTGAGACTGCATaGACAGAGGCTGGTGGCTGTTGGCCCAAGATCATA +
Preference number: 3 (lower is better)
Translates to: HSKEVTALSETA*TEAGGCWPKII
Trigger: TATGATCTTGGGCCAACAGCCACCAGCCTCTGTTCATGCAGTCTCACTGAGGGCAGTTACTTCTTTGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 72 bp TCCCGGCTACGTGAAGCCTTTGAGAGCAGATTTTGCTaGTTTGCAGTGGGGGAAGCAACTAACTCAGACTGT +
Preference number: 3 (lower is better)
Translates to: SRLREAFESRFC*FAVGEATNSDC
Trigger: ACAGTCTGAGTTAGTTGCTTCCCCCACTGCAAAGCAGCAAAATCTGCTCTCAAAGGCTTCACGTAGCCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp AGAAATGGGCTTTTGGGTTCCAAGTTCTGTCAGTGTTaGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: RNGLLGSKFCQC*VTEVVHRGLSE
Trigger: CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGAACCCAAAAGCCCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp AACAGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATaGGAGCCTGCAGTGGTCAGTGGATTGTTCAGCATA +
Preference number: 3 (lower is better)
Translates to: NRGWWLLAQDHK*EPAVVSGLFSI
Trigger: TATGCTGAACAATCCACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp AACGTCGACAGTAATCACATAATAGTAGTGTCATGCTaGCTGTGCATCCTCAAGCCACTCTCTCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: NVDSNHIIVVSC*LCILKPLSPQH
Trigger: GTGCTGGGGAGAGAGTGGCTTGAGGATGCACAGCCAGCATGACACTACTATTATGTGATTACTGTCGACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR TCA 72 bp CTCATTCAGGCCAGGACCCCTAGGAAGACTTCATACTaGTTTACAGCAAAGCACGTGTTGGCCAGTAAGTGT +
Preference number: 3 (lower is better)
Translates to: LIQARTPRKTSY*FTAKHVLASKC
Trigger: ACACTTACTGGCCAACACGTGCTTTGCTGTAAATCAGTATGAAGTCTTCCTAGGGGTCCTGGCCTGAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR GCA 72 bp ATGAACGTCGACAGTAATCACATAATAGTAGTGTCATaGTGGCTGTGCATCCTCAAGCCACTCTCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: MNVDSNHIIVVS*WLCILKPLSPQ
Trigger: CTGGGGAGAGAGTGGCTTGAGGATGCACAGCCAGCATGACACTACTATTATGTGATTACTGTCGACGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR CCA 72 bp TGCATGCACCGCTGGCCTTGGAGACTAAGGAGGAGATaGGTACAACTATTGTTCTCTGCCTCATTGGATTTT +
Preference number: 3 (lower is better)
Translates to: CMHRWPWRLRRR*VQLLFSASLDF
Trigger: AAAATCCAATGAGGCAGAGAACAATAGTTGTACCCATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp GTAAGTGTGCATTCAGATGTTGTGTCATCAGTGAGGTaGGTATTCTCCTGGAAGCTGCAGTGTTGCCAAGCA +
Preference number: 3 (lower is better)
Translates to: VSVHSDVVSSVR*VFSWKLQCCQA
Trigger: TGCTTGGCAACACTGCAGCTTCCAGGAGAATACCCACCTCACTGATGACACAACATCTGAATGCACACTTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR-3UTR CAA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATTGCCTTTGCCTCACCTaGGAAGGGCCACGAGGAGCT +
Preference number: 3 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYCLCLT*EGPRGA
Trigger: AGCTCCTCGTGGCCCTTCCAAGGTGAGGCAAAGGCA...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATTGGCTTCCCTGCAGCTaGAGGCAGGAGGTAACCAGC +
Preference number: 3 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYWLPCS*RQEVTS
Trigger: GCTGGTTACCTCCTGCCTCAAGCTGCAGGGAAGCCA...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGGAGAGAAATGGGCTTTaGGGTTCCAAGTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: NSRDSQHLQIIMQQLGREERNGL*GSKFCQ
Trigger: CTGACAGAACTTGGAACCCAAAAGCCCATTTCTCTC...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp CATGCATGCGGCAATCATGGAACACTTCCACACTGCTaGTGGGAATGTAAACTATTAGAGCCACCATGGAAA +
Preference number: 3 (lower is better)
Translates to: HACGNHGTLPHC*WECKLLEPPWK
Trigger: TTTCCATGGTGGCTCTAATAGTTTACATTCCCACCAGCAGTGTGGAAGTGTTCCATGATTGCCGCATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAGGCTCACTCCTCACCTaGAGAAGTTTACAGCTGTGT +
Preference number: 3 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAGSLLT*RSLQLC
Trigger: ACACAGCTGTAAACTTCTCAAGGTGAGGAGTGAGCC...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp TCAGATGTTGTGTCATCAGTGAGGTGGGTATTCTCCTaGAAGCTGCAGTGTTGCCAAGCAATGAATAAGAAC +
Preference number: 3 (lower is better)
Translates to: SDVVSSVRWVFS*KLQCCQAMNKN
Trigger: GTTCTTATTCATTGCTTGGCAACACTGCAGCTTCCAGGAGAATACCCACCTCACTGATGACACAACATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR-3UTR CAA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCTTAGTTGGTCTCACTTaGAGATGCTCATTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTLVGLT*RCSFPS
Trigger: AGAGGGAAATGAGCATCTCAAAGTGAGACCAACTAA...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp GGAGGAGATGGGTACAACTATTGTTCTCTGCCTCATTaGATTTTAGCTTTGGTCATGATAGCAGTTGGCTGT +
Preference number: 3 (lower is better)
Translates to: GGDGYNYCSLPH*ILALVMIAVGC
Trigger: ACAGCCAACTGCTATCATGACCAAAGCTAAAATCCAATGAGGCAGAGAACAATAGTTGTACCCATCTCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCATCAGTCTTCTGGATTTaGGCCATTCTGATAGGTGTG +
Preference number: 3 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLASVFWI*AILIGV
Trigger: CACACCTATCAGAATGGCCAAAATCCAGAAGACTGA...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATACAGCAAAGCACGTGTaGGCCAGTAAGTGTGCATTC +
Preference number: 3 (lower is better)
Translates to: VICFHSDHVRQGKVIISHTAKHV*ASKCAF
Trigger: GAATGCACACTTACTGGCCAACACGTGCTTTGCTGT...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR CCA 72 bp ATGTTTATAGCAGCACAATTCACAACTGCAAAATCGTaGAACCAACCCAAATGCCCATCAGTCAACAAGTGG +
Preference number: 3 (lower is better)
Translates to: MFIAAQFTTAKS*NQPKCPSVNKW
Trigger: CCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATTTTGCAGTTGTGAATTGTGCTGCTATAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp GTCTTCTGGATTTTGGCCATTCTGATAGGTGTGTGGTaGTACTGTTGTTTCAATTTGCAATCCCCTAATGTC +
Preference number: 3 (lower is better)
Translates to: VFWILAILIGVW*YCCFNLQSPNV
Trigger: GACATTAGGGGATTGCAAATTGAAACAACAGTACCACCACACACCTATCAGAATGGCCAAAATCCAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp GGAAGACTTCATACTGATTTACAGCAAAGCACGTGTTaGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCA +
Preference number: 3 (lower is better)
Translates to: GRLHTDLQQSTC*PVSVHSDVVSS
Trigger: TGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGTAAATCAGTATGAAGTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR-3UTR CAA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCACATTGGATTTTAGCTTaGGTCATGATAGCAGTTGGC +
Preference number: 3 (lower is better)
Translates to: FTALKFVCILPVHPSLHPHWILA*VMIAVG
Trigger: GCCAACTGCTATCATGACCAAAGCTAAAATCCAATG...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 72 bp CCTTTGTGTCCTCATAGCTTAGCTCCCACATATCAATaGGAACATAGGTTGTTTGGTTTTCCATTCCTGAGT +
Preference number: 3 (lower is better)
Translates to: PLCPHSLAPTYQ*EHRLFGFPFLS
Trigger: ACTCAGGAATGGAAAACCAAACAACCTATGTTCTCATTGATATGTGGGAGCTAAGCTATGAGGACACAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR GCA 72 bp TTGTTTAGTAAGAGTATGTTTACCTTTTTAGGAATCTaGCAGACTGTCTTCCCAAGTGGCTCCACCACTTTG +
Preference number: 3 (lower is better)
Translates to: LFSKSMFTFLGI*QTVFPSGSTTL
Trigger: CAAAGTGGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACTCTTACTAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATCATAGAGAAGCGCCATaGGAAAGCTTCAAGTTGAAG +
Preference number: 3 (lower is better)
Translates to: VICFHSDHVRQGKVIISHHREAP*ESFKLK
Trigger: CTTCAACTTGAAGCTTTCCAATGGCGCTTCTCTATG...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR-3UTR CAA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATCATAGAGAAGCGCCATaGGAAAGCTTCAAGTTGAAG +
Preference number: 3 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYHREAP*ESFKLK
Trigger: CTTCAACTTGAAGCTTTCCAATGGCGCTTCTCTATG...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAACTATACCATATATGTaGTCTTTTATTCCTCACCCC +
Preference number: 3 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLATIPYM*SFIPHP
Trigger: GGGGTGAGGAATAAAAGACAACATATATGGTATAGT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCAGGGATAGCCAACATTaGCAAATAATAATGCAACAG +
Preference number: 3 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTRDSQH*QIIMQQ
Trigger: CTGTTGCATTATTATTTGCAAATGTTGGCTATCCCT...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp ATCTTAAGAAAGGTGGTTAAGCTTTGGTTACAGCAATaGCCGATAGAGAAGATTATGGCTGTATCAGACACA +
Preference number: 3 (lower is better)
Translates to: ILRKVVKLWLQQ*PIEKIMAVSDT
Trigger: TGTGTCTGATACAGCCATAATCTTCTCTATCGGCCATTGCTGTAACCAAAGCTTAACCACCTTTCTTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp TTAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCATTACTGGGTATCAGATGGGTACAACTATaGTTCTCTGCCTCATTGGAT +
Preference number: 3 (lower is better)
Translates to: LELKVELPFDPAIPLLGIRWVQL*FSASLD
Trigger: ATCCAATGAGGCAGAGAACAATAGTTGTACCCATCT...GATACCCAGTAATGGGATTGCTGGATCAAATGGTAGTTCTACTTTTAGTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 72 bp CTTGAGAAGTTTACAGCTGTGTTGGGTAGACAAAATTaGTATATAGACAACAGCAGGGATAGCCAACATTTG +
Preference number: 3 (lower is better)
Translates to: LEKFTAVLGRQN*YIDNSRDSQHL
Trigger: CAAATGTTGGCTATCCCTGCTGTTGTCTATATATCAATTTTGTCTACCCAACACAGCTGTAAACTTCTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp TGGTTGATCAATATCTTAAGAAAGGTGGTTAAGCTTTaGTTACAGCAATGGCCGATAGAGAAGATTATGGCT +
Preference number: 3 (lower is better)
Translates to: WLINILRKVVKL*LQQWPIEKIMA
Trigger: AGCCATAATCTTCTCTATCGGCCATTGCTGTAACCAAAGCTTAACCACCTTTCTTAAGATATTGATCAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 72 bp ACTCCAGATGAGATGATAAGGCAAAGCAATGCCAGATaGATTCATCAAGATAAAAAGCAGTATGGCAATGTT +
Preference number: 3 (lower is better)
Translates to: TPDEMIRQSNAR*IHQDKKQYGNV
Trigger: AACATTGCCATACTGCTTTTTATCTTGATGAATTCATCTGGCATTGCTTTGCCTTATCATCTCATCTGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR TCA 72 bp ATTGCGCCAACATTCCCTTCATATATCTTTCAAGAGTaGTGGAGAATGATACTAATGCCAAGTATCATTTCC +
Preference number: 3 (lower is better)
Translates to: IAPTFPSYIFQE*WRMILMPSIIS
Trigger: GGAAATGATACTTGGCATTAGTATCATTCTCCATCACTCTTGAAAGATATATGAAGGGAATGTTGGCGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR-3UTR CAA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGATTTTAGCTACTTACTaGTTTCTTACCTGTCACTCC +
Preference number: 3 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRILATY*FLTCHS
Trigger: GGAGTGACAGGTAAGAAACAAGTAAGTAGCTAAAAT...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CCA 72 bp GAATGTAAACTATTAGAGCCACCATGGAAAACAGTGTaGAAATTCCTTAGAACTAAAAGTAGAACTACCATT +
Preference number: 3 (lower is better)
Translates to: ECKLLEPPWKTV*KFLRTKSRTTI
Trigger: AATGGTAGTTCTACTTTTAGTTCTAAGGAATTTCCACACTGTTTTCCATGGTGGCTCTAATAGTTTACATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp CTCCACCCGTGCTGTGGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCTTTATACCGGAGTCCCGCACTaGCGGGACTCTGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LHPCCGPSAVVTLSHSLYTGVPH*RDSAER
Trigger: CCTTTCTGCAGAGTCCCGGCAGTGCGGGACTCCGGT...ATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTAGCGAGGGCAGCTCCTaGACCACCCAGGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISSEGSS*TTQAAR
Trigger: GCGGGCCGCCTGGGTGGTGCAGGAGCTGCCCTCGCT...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR TCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGCCCACCAGCCGTGAATaGGAGTTCCTGTTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSEPTSRE*EFLLLH
Trigger: GTGGAGCAACAGGAACTCTCATTCACGGCTGGTGGG...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp CTCCACCCGTGCTGTGGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCTTTATGCCATGACTGCACAATaGCTACCCCCAGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LHPCCGPSAVVTLSHSLYAMTAQ*LPPASV
Trigger: CACAGAGGCTGGGGGTAGCCATTGTGCAGTCATGGC...ATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTCCGGCAATGGGCACATaGCTCATTTCTGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSPAMGT*LISGLS
Trigger: AGAGAGCCCAGAAATGAGCCATGTGCCCATTGCCGG...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTGTGCTGTGGTCCATCTaGAGTGGTGACTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSVLWSI*SGDSLS
Trigger: TGAGAGAGAGTCACCACTGCAGATGGACCACAGCAC...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTGAATGCACAAATGCATaGACCGCTGGCCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSECTNA*TAGLGD
Trigger: GTCTCCAAGGCCAGCGGTGCATGCATTTGTGCATTC...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCCTGTCAGCCCAGATGTaGGGACCCAGGGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTLSAQM*GPRVSA
Trigger: TGCGGAGACCCTGGGTCCTCACATCTGGGCTGACAG...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGTCTGTCAGTGTTGGGTaGCTGAAGTCGTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSESVSVG*LKSCTE
Trigger: CTCTGTGCACGACTTCAGTCACCCAACACTGACAGA...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGAAATGCATGCACCGCTaGCCTTGGAGACTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSEKCMHR*PWRLRR
Trigger: CCTCCTTAGTCTCCAAGGCCAGCGGTGCATGCATTT...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp CTCCACCCGTGCTGTGGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCTTTATCCAGAGGATCTGAATTaGGAACGGAGTTTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LHPCCGPSAVVTLSHSLYPEDLN*ERSFPG
Trigger: GCCGGGAAAACTCCGTTCCCAATTCAGATCCTCTGG...ATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGCGGAGGTACCACTCATaGTGCTCTTTTGCTCTACCA +
Preference number: 4 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSERRYHS*CSFALP
Trigger: TGGTAGAGCAAAAGAGCATCATGAGTGGTACCTCCG...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGGTCCATCTGCAGTGGTaGCTCTCTCTCACTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSEVHLQW*LSLTLF
Trigger: AAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGAC...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TTAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCATTACTGGGTATCAGCGAGGGCAGCTCCTaGACCACCCAGGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LELKVELPFDPAIPLLGISEGSS*TTQAAR
Trigger: GCGGGCCGCCTGGGTGGTGCAGGAGCTGCCCTCGCT...GATACCCAGTAATGGGATTGCTGGATCAAATGGTAGTTCTACTTTTAGTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGGGTCTCACTTTGAGATaGTCATTTCCCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSEGLTLR*SFPSAF
Trigger: GAAGGCAGAGGGAAATGAGCATCTCAAAGTGAGACC...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGCAGCACCCACTGCTGTaGTTGATATACAGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSEQHPLL*LIYSKC
Trigger: GCACTTACTGTATATCAAGCACAGCAGTGGGTGCTG...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTGCCATGACTGCACAATaGCTACCCCCAGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISAMTAQ*LPPASV
Trigger: CACAGAGGCTGGGGGTAGCCATTGTGCAGTCATGGC...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCTCTCCACCCGTGCTGTaGTCCATCTGCAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTSPPVL*SICSGD
Trigger: GTCACCACTGCAGATGGACCACAGCACGGGTGGAGA...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp CTCCACCCGTGCTGTGGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCTTTATTTTGCTGCTTTGCAGTaGGGGAAGCAACTAACTCAG +
Preference number: 4 (lower is better)
Translates to: LHPCCGPSAVVTLSHSLYFAALQ*GKQLTQ
Trigger: CTGAGTTAGTTGCTTCCCCCACTGCAAAGCAGCAAA...ATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAGCCCATCTCCACCCGTaGTGTGGTCCATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAAHLHP*CGPSAV
Trigger: CACTGCAGATGGACCACAGCACGGGTGGAGATGGGC...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp GGTAACCAGCCATTATGGGGCAGGATCCCTATAGGCCAAAATGTGGAGACTTTAGACTGTCTTCCCAAGTaGCTCCACCACTTTGCATCC +
Preference number: 4 (lower is better)
Translates to: GNQPLWGRIPIGQNVETLDCLPK*LHHFAS
Trigger: GGATGCAAAGTGGTGGAGCCACTTGGGAAGACAGTC...TAAAGTCTCCACATTTTGGCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTGATCCGGGCAGACAATaGGTACCATGGGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISDPGRQ*VPWAGI
Trigger: AATGCCAGCCCATGGTACCCATTGTCTGCCCGGATC...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR TCA 90 bp CTCCACCCGTGCTGTGGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCTTTATCTTGGCAAATGTTGTTaGATGCACAAATGCATGCAC +
Preference number: 4 (lower is better)
Translates to: LHPCCGPSAVVTLSHSLYLGKCC*MHKCMH
Trigger: GTGCATGCATTTGTGCATTCAACAACATTTGCCAAG...ATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATACCGGAGTCCCGCACTaGCGGGACTCTGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VICFHSDHVRQGKVIISHTGVPH*RDSAER
Trigger: CCTTTCTGCAGAGTCCCGGCAGTGCGGGACTCCGGT...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCGGGTGTGCACTGTCATaGCCTCTCTGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTGCALS*PLCSAT
Trigger: TGTGGCAGAGCAGAGAGGCCATGACAGTGCACACCC...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTTGCAGGTTTTCTGTGTaGACATGTTTTCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSCRFSV*TCFQLL
Trigger: AAGGAGTTGAAAACATGTCCACACAGAAAACCTGCA...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTATGGGTACCATGGGCTaGCATTTGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISMGTMG*HLGCRH
Trigger: GTGCCTACATCCCAAATGCCAGCCCATGGTACCCAT...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR CAA 72 bp GGCTACGTGAAGCCTTTGAGAGCAGATTTTGCTGCTTaGCAGTGGGGGAAGCAACTAACTCAGACTGTCAAT +
Preference number: 4 (lower is better)
Translates to: GYVKPLRADFAA*QWGKQLTQTVN
Trigger: ATTGACAGTCTGAGTTAGTTGCTTCCCCCACTGCAAAGCAGCAAAATCTGCTCTCAAAGGCTTCACGTAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTCGGAGGTACCACTCATaGTGCTCTTTTGCTCTACCA +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISRRYHS*CSFALP
Trigger: TGGTAGAGCAAAAGAGCATCATGAGTGGTACCTCCG...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR TCA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCATCAGTGTTGGGTGACTaGAGTCGTGCACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FTALKFVCILPVHPSLHPSVLGD*SRAQRP
Trigger: AGGCCTCTGTGCACGACTTCAGTCACCCAACACTGA...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCAGGCACAGCTTGCAGTaGGCCAAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTRHSLQ*AKIAPL
Trigger: CAATGGTGCGATCTTGGCTCACTGCAAGCTGTGCCT...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp GGTAACCAGCCATTATGGGGCAGGATCCCTATAGGCCAAAATGTGGAGACTTTAGCTCACTCCTCACCTTaGGAAGTTTACAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GNQPLWGRIPIGQNVETLAHSSP*EVYSCV
Trigger: AACACAGCTGTAAACTTCTCAAGGTGAGGAGTGAGC...TAAAGTCTCCACATTTTGGCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCAAGAGGTGCAAAGAGTaGTGGCTCACTCCTCACCTT +
Preference number: 4 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTKRCKE*WLTPHL
Trigger: AAGGTGAGGAGTGAGCCATCACTCTTTGCACCTCTT...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCCATCCCCACCAGCCGTaGATGAGAGTTCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTHPHQP*MRVPVA
Trigger: AGCAACAGGAACTCTCATTCACGGCTGGTGGGGATG...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCACCAAGATCGCACCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAPRSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGCGATCTTGG...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCGAGAGCAGATTTTGCTaGTTTGCAGTGGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTESRFC*FAVGEA
Trigger: TGCTTCCCCCACTGCAAAGCAGCAAAATCTGCTCTC...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp CTCCACCCGTGCTGTGGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCTTTATCTATTAGAGCCACCATaGAAAACAGTGTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: LHPCCGPSAVVTLSHSLYLLEPP*KTVWKF
Trigger: GAATTTCCACACTGTTTTCCATGGTGGCTCTAATAG...ATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCTGCATGCGGCAATCATaGAACACTTCCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTCMRQS*NTSTLL
Trigger: CAGCAGTGTGGAAGTGTTCCATGATTGCCGCATGCA...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGAAAAACAGTAGATGTTaGCATGCATGCGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSEKNSRC*HACGNH
Trigger: ATGATTGCCGCATGCATGCCAACATCTACTGTTTTT...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTAGGTGGGTATTCTCCTaGAAGCTGCAGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISRWVFS*KLQCCQ
Trigger: TTGGCAACACTGCAGCTTCCAGGAGAATACCCACCT...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTGTGTCATCAGTGAGGTaGGTATTCTCCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISVSSVR*VFSWKL
Trigger: CAGCTTCCAGGAGAATACCCACCTCACTGATGACAC...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR TCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCACCTCCCCAGAGGATCTaGATTGGGAACGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAPPQRI*IGNGVF
Trigger: GAAAACTCCGTTCCCAATTCAGATCCTCTGGGGAGG...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTATGTTGTGTCATCAGTaGGGTGGGTATTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISMLCHQ*GGYSPG
Trigger: TCCAGGAGAATACCCACCTCACTGATGACACAACAT...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR GCA 90 bp TTAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCATTACTGGGTATCGGTCTCCGCAGGGTGTaGACTGTCATGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LELKVELPFDPAIPLLGIGLRRV*TVMASL
Trigger: CAGAGAGGCCATGACAGTGCACACCCTGCGGAGACC...GATACCCAGTAATGGGATTGCTGGATCAAATGGTAGTTCTACTTTTAGTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGGGCGCCATGTTTAGTTaGTCTCACTTTGAGATGCTC +
Preference number: 4 (lower is better)
Translates to: NSRDSQHLQIIMQQLGREGAMFS*SHFEML
Trigger: GAGCATCTCAAAGTGAGACCAACTAAACATGGCGCC...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp TTAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCATTACTGGGTATCTCTCTGTGCTCTCCCTaGAGAGTGGGGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LELKVELPFDPAIPLLGISLCSP*RVGVQR
Trigger: CCTCTGCACCCCCACTCTCCAGGGAGAGCACAGAGA...GATACCCAGTAATGGGATTGCTGGATCAAATGGTAGTTCTACTTTTAGTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCATCTCTTCCCCGGCAATaGGCACATGGCTCATTTCTG +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLASLPRQ*AHGSFL
Trigger: CAGAAATGAGCCATGTGCCCATTGCCGGGGAAGAGA...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCGGTAACCAGCCATTATaGGGCAGGATCCCTATAGGC +
Preference number: 4 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTGNQPL*GRIPIG
Trigger: GCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTAAGTTCTGTCAGTGTTaGGTGACTGAAGTCGTGCAC +
Preference number: 4 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFKFCQC*VTEVVH
Trigger: GTGCACGACTTCAGTCACCCAACACTGACAGAACTT...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTCAGCAAAGCACGTGTTaGCCAGTAAGTGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISQQSTC*PVSVHS
Trigger: TGAATGCACACTTACTGGCCAACACGTGCTTTGCTG...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTCTCCCACTTAACTCCTaGGGAAGACATTCACATGAG +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISLPLNS*GRHSHE
Trigger: CTCATGTGAATGTCTTCCCCAGGAGTTAAGTGGGAG...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTATAGTAGTGTCATGCTaGCTGTGCATCCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISIVVSC*LCILKP
Trigger: TGGCTTGAGGATGCACAGCCAGCATGACACTACTAT...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR GCA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGGGGTGCAGAGGACACTaGTTTCTGCTGCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRGCRGH*FLLQAP
Trigger: TGGCGCCTGCAGCAGAAAGCAGTGTCCTCTGCACCC...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTGGAACACTTCCACACTaGTGGTGGGAATGTAAACTA +
Preference number: 4 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFGTLPH*WWECKL
Trigger: TAGTTTACATTCCCACCAGCAGTGTGGAAGTGTTCC...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTAGATGTTGGCATGCATaGGGCAATCATGGAACACTT +
Preference number: 4 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFRCWHA*GNHGTL
Trigger: AAGTGTTCCATGATTGCCGCATGCATGCCAACATCT...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCATCTGCTCAGAGGCATaGCACTCCAAAGAAGTAACT +
Preference number: 4 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTICSEA*HSKEVT
Trigger: AGTTACTTCTTTGGAGTGGCATGCCTCTGAGCAGAT...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATGCACTGCCGGGACTCTaGAGAAAGGGTTCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: VICFHSDHVRQGKVIISHALPGL*RKGSQV
Trigger: GACTTGAGAACCCTTTCTGCAGAGTCCCGGCAGTGC...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR GCA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTCACACTGCAAGTGCTTaGATACCAACATTTCCGATG +
Preference number: 4 (lower is better)
Translates to: TAKHVLASKCAFRCCVISHTASA*IPTFPM
Trigger: CATCGGAAATGTTGGTATGCAAGCACTTGCAGTGTG...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCACGGAAGGAGAGAAATaGGCTTTTGGGTTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTTEGEK*AFGFQV
Trigger: AACTTGGAACCCAAAAGCCCATTTCTCTCCTTCCGT...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AATTTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGATGCACCGCTGGCCTTaGAGACTAAGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: NFFIRPPIEGHLGCFQFLMHRWP*RLRRRW
Trigger: CCATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCAT...CAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp GGTAACCAGCCATTATGGGGCAGGATCCCTATAGGCCAAAATGTGGAGACTTTACTTCCACACTGCTGGTaGGAATGTAAACTATTAGAG +
Preference number: 4 (lower is better)
Translates to: GNQPLWGRIPIGQNVETLLPHCW*ECKLLE
Trigger: CTCTAATAGTTTACATTCCCACCAGCAGTGTGGAAG...TAAAGTCTCCACATTTTGGCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 72 bp ATGTTGTTGAATGCACAAATGCATGCACCGCTGGCCTaGGAGACTAAGGAGGAGATGGGTACAACTATTGTT +
Preference number: 4 (lower is better)
Translates to: MLLNAQMHAPLA*ETKEEMGTTIV
Trigger: AACAATAGTTGTACCCATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCATGCATTTGTGCATTCAACAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 72 bp GCAAGAGGTGCAAAGAGTGATGGCTCACTCCTCACCTaGAGAAGTTTACAGCTGTGTTGGGTAGACAAAATT +
Preference number: 4 (lower is better)
Translates to: ARGAKSDGSLLT*RSLQLCWVDKI
Trigger: AATTTTGTCTACCCAACACAGCTGTAAACTTCTCAAGGTGAGGAGTGAGCCATCACTCTTTGCACCTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAAACAGGTACAGGCTATaGGGGGAAAGCTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLANRYRL*GESFAK
Trigger: CTTTGCAAAGCTTTCCCCTCATAGCCTGTACCTGTT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 72 bp TGGCCTTGGAGACTAAGGAGGAGATGGGTACAACTATaGTTCTCTGCCTCATTGGATTTTAGCTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: WPWRLRRRWVQL*FSASLDFSFGH
Trigger: ATGACCAAAGCTAAAATCCAATGAGGCAGAGAACAATAGTTGTACCCATCTCCTCCTTAGTCTCCAAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 72 bp TTCTCACTAGCATTGGTGATGTCAGTCTTCTGGATTTaGGCCATTCTGATAGGTGTGTGGTGGTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: FSLALVMSVFWI*AILIGVWWYCC
Trigger: ACAACAGTACCACCACACACCTATCAGAATGGCCAAAATCCAGAAGACTGACATCACCAATGCTAGTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCACCACCTAAATTCCTTTaGGGTGATTTCAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAPPKFL*GDFNWG
Trigger: ACCCCAGTTGAAATCACCTCAAAGGAATTTAGGTGG...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp GGTAACCAGCCATTATGGGGCAGGATCCCTATAGGCCAAAATGTGGAGACTTTAATGGCCAACAAAGTATaGAAAAATGCTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: GNQPLWGRIPIGQNVETLMANKV*KNAQHH
Trigger: GTGATGTTGAGCATTTTTTCATACTTTGTTGGCCAT...TAAAGTCTCCACATTTTGGCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAAGTAACTGCCCTCAGTaGGACTGCATGAACAGAGGC +
Preference number: 4 (lower is better)
Translates to: IVEPTQMPISQQVVYIYISNCPQ*DCMNRG
Trigger: GCCTCTGTTCATGCAGTCTCACTGAGGGCAGTTACT...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCAACAATAGGAAATAATTaGTGCCCTCCCCAGAGGATC +
Preference number: 4 (lower is better)
Translates to: FTALKFVCILPVHPSLHPTIGNN*CPPQRI
Trigger: GATCCTCTGGGGAGGGCATCAATTATTTCCTATTGT...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATTGCGTCTTGGAATCATaGTTCAGATCCGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: VICFHSDHVRQGKVIISHCVLES*FRSGQT
Trigger: TGTCTGCCCGGATCTGAATCATGATTCCAAGACGCA...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR GCA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCATTTCAGGAATCCTGCTaGAAAAAGGCAAGGGGAACA +
Preference number: 4 (lower is better)
Translates to: FTALKFVCILPVHPSLHPFQESC*KKARGT
Trigger: TGTTCCCCTTGCCTTTTTGCAGCAGGATTCCTGAAA...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp GGTAACCAGCCATTATGGGGCAGGATCCCTATAGGCCAAAATGTGGAGACTTTAGAAGGACATCTTGGTTaGTTCCAATTTTTGGCAATT +
Preference number: 4 (lower is better)
Translates to: GNQPLWGRIPIGQNVETLEGHLG*FQFLAI
Trigger: AATTGCCAAAAATTGGAAGCAACCAAGATGTCCTTC...TAAAGTCTCCACATTTTGGCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTCTTTACCAGGACACTTaGGCTGTTTCAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFLYQDT*AVSISS
Trigger: ACTAGATATTGAAACAGCCCAAGTGTCCTGGTAAAG...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAGCAAATGTTGTTGAATaGACAAATGCATGCACCGCT +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAANVVE*TNACTA
Trigger: AGCGGTGCATGCATTTGTGCATTCAACAACATTTGC...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp AATTTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGTGGAACCAACCCAAATaGCCATCAGTCAACAAGTGG +
Preference number: 4 (lower is better)
Translates to: NFFIRPPIEGHLGCFQFLWNQPK*PSVNKW
Trigger: CCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCA...CAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCATGTTATCATATGCTTaGCACTCAGTTTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTMLSYA*HSVLFP
Trigger: GGGAAACAAAACTGAGTGCCAAGCATATGATAACAT...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATAGACAATGGGTACCATaGGCTGGCATTTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: VICFHSDHVRQGKVIISHRQWVP*AGIWDV
Trigger: TACATCCCAAATGCCAGCCCATGGTACCCATTGTCT...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
3UTR CAA 72 bp TACAACTATTGTTCTCTGCCTCATTGGATTTTAGCTTaGGTCATGATAGCAGTTGGCTGTGGTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: YNYCSLPHWILA*VMIAVGCGLPT
Trigger: TGTAGGAAGACCACAGCCAACTGCTATCATGACCAAAGCTAAAATCCAATGAGGCAGAGAACAATAGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 72 bp GTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTaGGGTAAACACCTAGGAGCAAATCTACTAGATTGT +
Preference number: 4 (lower is better)
Translates to: VQVFCVDMFSTP*GKHLGANLLDC
Trigger: ACAATCTAGTAGATTTGCTCCTAGGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCAGTAGAACTACCATTTaGTCCAGCAATCCCATTACT +
Preference number: 4 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTSRTTI*SSNPIT
Trigger: AGTAATGGGATTGCTGGATCAAATGGTAGTTCTACT...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TTAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCATTACTGGGTATCTTTAGTGGTGATTTGTaGGATCCTGGTGCACCCATC +
Preference number: 4 (lower is better)
Translates to: LELKVELPFDPAIPLLGIFSGDL*DPGAPI
Trigger: GATGGGTGCACCAGGATCTCACAAATCACCACTAAA...GATACCCAGTAATGGGATTGCTGGATCAAATGGTAGTTCTACTTTTAGTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATATATCCGCCCACCTATTaGAGGACATCTTGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: IVEPTQMPISQQVVYIYIYPPTY*RTSWLL
Trigger: AAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATA...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATATTTGTGAGATCCTGGTaGACCCATCTCCTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: IVEPTQMPISQQVVYIYIFVRSW*THLLSS
Trigger: ACTACTCAGGAGATGGGTGCACCAGGATCTCACAAA...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCCATAGGGTCTGTACTTaGTCCAACAAATTCTCCATA +
Preference number: 4 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTHRVCT*SNKFSI
Trigger: TATGGAGAATTTGTTGGAGCAAGTACAGACCCTATG...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAAATTTGTTTGTATTCTaGCTGTTCATCCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLANLFVF*LFIPPF
Trigger: GAAGGGAGGGATGAACAGGCAGAATACAAACAAATT...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCCTTTGGTTACAGCAATaGCCGATAGAGAAGATTATG +
Preference number: 4 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTLWLQQ*PIEKIM
Trigger: CATAATCTTCTCTATCGGCCATTGCTGTAACCAAAG...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAGGTGGAGAGAGGACCTaGAATAGGTCGATGAATATC +
Preference number: 4 (lower is better)
Translates to: IVEPTQMPISQQVVYIYIGGERT*NRSMNI
Trigger: GATATTCATCGACCTATTCCAGGTCCTCTCTCCACC...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCAAGTGGGTTAAGGACATaGATAGACAATTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FTALKFVCILPVHPSLHPSGLRT*IDNSQK
Trigger: CTTTTGAGAATTGTCTATTCATGTCCTTAACCCACT...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATTTTGAGAGCAGATTTTaGTGCTTTGCAGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYFESRF*CFAVGE
Trigger: TTCCCCCACTGCAAAGCAGCAAAATCTGCTCTCAAA...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR GCA 90 bp TTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGGCAGAGCATGTTATCATATaGTTGGCACTCAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FFIRPPIEGHLGCFQFLAEHVII*LALSFV
Trigger: AACAAAACTGAGTGCCAAGCATATGATAACATGCTC...TGCCAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGGGTCATGATAGCAGTTaGCTGTGGTCTTCCTACAGA +
Preference number: 4 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRGHDSS*LWSSYR
Trigger: TCTGTAGGAAGACCACAGCCAACTGCTATCATGACC...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAACAACTGCAAAATCGTaGAACCAACCCAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: IVEPTQMPISQQVVYIYITTAKS*NQPKCP
Trigger: TGGGCATTTGGGTTGGTTCCACGATTTTGCAGTTGT...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATCAGCAATCCCATTACTaGGTATCTACCCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYQQSHY*VSTQRK
Trigger: TTTCCTCTGGGTAGATACCCAGTAATGGGATTGCTG...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp GTTATTTGTTTCCATTCTGACCATGTGCGCCAGGGTAAAGTCATAATTAGTCATTTTCTCTCTGCGTCTTaGAATCATGATTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: VICFHSDHVRQGKVIISHFLSAS*NHDSDP
Trigger: CGGATCTGAATCATGATTCCAAGACGCAGAGAGAAA...ATGACTAATTATGACTTTACCCTGGCGCACATGGTCAGAATGGAAACAAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR GCA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCAAACTAAAGAGCTTTTaGATGGTAAAAGCAACAGTC +
Preference number: 4 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTKLKSF*MVKATV
Trigger: GACTGTTGCTTTTACCATGCAAAAGCTCTTTAGTTT...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAGACAACGCACAGAGTaGGAGAAAATCTTCACAATC +
Preference number: 4 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYRQRTE*EKIFTI
Trigger: GATTGTGAAGATTTTCTCCCACTCTGTGCGTTGTCT...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
3UTR CAA 72 bp CTTTACCAGGACACTTGGGCTGTTTCAATATCTAGTTaGACATTGATTATTGGAATTATCTGCTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYQDTWAVSISS*TLIIGIICSEA
Trigger: TGCCTCTGAGCAGATAATTCCAATAATCAATGTCAAACTAGATATTGAAACAGCCCAAGTGTCCTGGTAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR TCA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAATATGTTTCTAGACTaGTTGCGCCAACATTCCCTT +
Preference number: 4 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYNMFLD*LRQHSL
Trigger: AAGGGAATGTTGGCGCAATCAGTCTAGAAACATATT...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp TTAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCATTACTGGGTATCCTCATCAGATTTAACTaGAAGCTCTCAAGGCTACTT +
Preference number: 4 (lower is better)
Translates to: LELKVELPFDPAIPLLGILIRFN*KLSRLL
Trigger: AAGTAGCCTTGAGAGCTTCCAGTTAAATCTGATGAG...GATACCCAGTAATGGGATTGCTGGATCAAATGGTAGTTCTACTTTTAGTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAGACTAAGGAGGAGATaGGTACAACTATTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYRLRRR*VQLLFS
Trigger: AGAGAACAATAGTTGTACCCATCTCCTCCTTAGTCT...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGAAGGTGGTTAAGCTTTaGTTACAGCAATGGCCGATA +
Preference number: 4 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRKVVKL*LQQWPI
Trigger: TATCGGCCATTGCTGTAACCAAAGCTTAACCACCTT...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp AATTTCTTTATCCGCCCACCTATTGAAGGACATCTTGGTTGCTTCCAATTTTTGTTTGACATTGATTATTaGAATTATCTGCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NFFIRPPIEGHLGCFQFLFDIDY*NYLLRG
Trigger: GCCTCTGAGCAGATAATTCCAATAATCAATGTCAAA...CAAAAATTGGAAGCAACCAAGATGTCCTTCAATAGGTGGGCGGATAAAGAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CCA 90 bp TTAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCATTACTGGGTATCCCATGGAAAACAGTGTaGAAATTCCTTAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: LELKVELPFDPAIPLLGIPWKTV*KFLRTK
Trigger: TTTAGTTCTAAGGAATTTCCACACTGTTTTCCATGG...GATACCCAGTAATGGGATTGCTGGATCAAATGGTAGTTCTACTTTTAGTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS CCA 90 bp GCGTCTTGGAATCATGATTCAGATCCGGGCAGACAATGGGTACCATaGGCTGGCATTTGGGATGTAGGCACACTGCAAGTGCTTGCATAC +
Preference number: 5 (lower is better)
Translates to: ASWNHDSDPGRQWVP*AGIWDVGTLQVLAY
Trigger: GTATGCAAGCACTTGCAGTGTGCCTACATCCCAAATGCCAGCCCATGGTACCCATTGTCTGCCCGGATCTGAATCATGATTCCAAGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CAA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCTGCCTTTGCCTCACCTaGGAAGGGCCACGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTCLCLT*EGPRGA
Trigger: AGCTCCTCGTGGCCCTTCCAAGGTGAGGCAAAGGCA...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGTGGCTTCCCTGCAGCTaGAGGCAGGAGGTAACCAGC +
Preference number: 5 (lower is better)
Translates to: NSRDSQHLQIIMQQLGREWLPCS*RQEVTS
Trigger: GCTGGTTACCTCCTGCCTCAAGCTGCAGGGAAGCCA...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGCCCAGAGGATCTGAATaGGGAACGGAGTTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: NSRDSQHLQIIMQQLGREPRGSE*GTEFSR
Trigger: CCGGGAAAACTCCGTTCCCAATTCAGATCCTCTGGG...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTACCATGGGCTGGCATTaGGGATGTAGGCACACTGCA +
Preference number: 5 (lower is better)
Translates to: TAKHVLASKCAFRCCVISTMGWH*GCRHTA
Trigger: TGCAGTGTGCCTACATCCCAAATGCCAGCCCATGGT...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CAA 90 bp AGAGGCTGGTGGCTGTTGGCCCAAGATCATAAATGGGAGCCTGCAGTGGTCAGTAGTGCTTGGCAAATGTaGTTGAATGCACAAATGCAT +
Preference number: 5 (lower is better)
Translates to: RGWWLLAQDHKWEPAVVSSAWQM*LNAQMH
Trigger: ATGCATTTGTGCATTCAACAACATTTGCCAAGCACT...ACTGACCACTGCAGGCTCCCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp TCCAAGTTCTGTCAGTGTTGGGTGACTGAAGTCGTGCACAGAGGCCTCTCTGAGATGTTTTCAACTCCTTaGGGTAAACACCTAGGAGCA +
Preference number: 5 (lower is better)
Translates to: SKFCQCWVTEVVHRGLSEMFSTP*GKHLGA
Trigger: TGCTCCTAGGTGTTTACCCAAAGGAGTTGAAAACAT...CTCAGAGAGGCCTCTGTGCACGACTTCAGTCACCCAACACTGACAGAACTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCGCTGAGGCAGAAGAATaGTTTGAACCCGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTAEAEE*FEPGRH
Trigger: GTGCCTCCCGGGTTCAAACAATTCTTCTGCCTCAGC...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp AGTATGTTTACCTTTTTAGGAATCTGCCAGACTGTCTTCCCAAGTGGCTCCACCATAATAATGCAACAGTaGGGCCGGGAGCTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SMFTFLGICQTVFPSGSTIIMQQ*GRELWL
Trigger: AAGCCACAGCTCCCGGCCCAACTGTTGCATTATTAT...GGTGGAGCCACTTGGGAAGACAGTCTGGCAGATTCCTAAAAAGGTAAACATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS CCA 90 bp GCAATGAATAAGAACAACGAATCCCAGCAATTTCTCTCTGCGTCTTaGAATCATGATTCAGATCCGGGCAGACAATGGGTACCATGGGCT +
Preference number: 5 (lower is better)
Translates to: AMNKNNESQQFLSAS*NHDSDPGRQWVPWA
Trigger: AGCCCATGGTACCCATTGTCTGCCCGGATCTGAATCATGATTCCAAGACGCAGAGAGAAATTGCTGGGATTCGTTGTTCTTATTCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CAA 90 bp CTCCACCCGTGCTGTGGTCCATCTGCAGTGGTGACTCTCTCTCACTCTCTTTATACTATACCATATATGTaGTCTTTTATTCCTCACCCC +
Preference number: 5 (lower is better)
Translates to: LHPCCGPSAVVTLSHSLYTIPYM*SFIPHP
Trigger: GGGGTGAGGAATAAAAGACAACATATATGGTATAGT...ATAAAGAGAGTGAGAGAGAGTCACCACTGCAGATGGACCACAGCACGGGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTGCACACTGCAAGTGCTaGCATACCAACATTTCCGAT +
Preference number: 5 (lower is better)
Translates to: TAKHVLASKCAFRCCVISAHCKC*HTNISD
Trigger: ATCGGAAATGTTGGTATGCAAGCACTTGCAGTGTGC...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CAA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTCATAGAGAAGCGCCATaGGAAAGCTTCAAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFHREAP*ESFKLK
Trigger: CTTCAACTTGAAGCTTTCCAATGGCGCTTCTCTATG...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATACATGCACCGCTGGCCTaGGAGACTAAGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: IVEPTQMPISQQVVYIYIHAPLA*ETKEEM
Trigger: CATCTCCTCCTTAGTCTCCAAGGCCAGCGGTGCATG...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCAGGCTCACTCCTCACCTaGAGAAGTTTACAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: FTALKFVCILPVHPSLHPGSLLT*RSLQLC
Trigger: ACACAGCTGTAAACTTCTCAAGGTGAGGAGTGAGCC...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp ATGCAACAGTCAGGAGTATCAACAGCTAGCTTTACCAGGACACTTGGGCTGTTTTTAGTTGGTCTCACTTaGAGATGCTCATTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: MQQSGVSTASFTRTLGLFLVGLT*RCSFPS
Trigger: AGAGGGAAATGAGCATCTCAAAGTGAGACCAACTAA...AAACAGCCCAAGTGTCCTGGTAAAGCTAGCTGTTGATACTCCTGACTGTTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp GGTAACCAGCCATTATGGGGCAGGATCCCTATAGGCCAAAATGTGGAGACTTTATGCCCTAAAATTTGTTaGTATTCTGCCTGTTCATCC +
Preference number: 5 (lower is better)
Translates to: GNQPLWGRIPIGQNVETLCPKIC*YSACSS
Trigger: GGATGAACAGGCAGAATACAAACAAATTTTAGGGCA...TAAAGTCTCCACATTTTGGCCTATAGGGATCCTGCCCCATAATGGCTGGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGCAAATAAGCCTCCCCTaGGTATTTTGTATCCAGTAT +
Preference number: 5 (lower is better)
Translates to: NSRDSQHLQIIMQQLGREQISLP*VFCIQY
Trigger: ATACTGGATACAAAATACCAAGGGGAGGCTTATTTG...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp ACAGCAAAGCACGTGTTGGCCAGTAAGTGTGCATTCAGATGTTGTGTCATCAGTCAAATAAGCCTCCCCTaGGTATTTTGTATCCAGTAT +
Preference number: 5 (lower is better)
Translates to: TAKHVLASKCAFRCCVISQISLP*VFCIQY
Trigger: ATACTGGATACAAAATACCAAGGGGAGGCTTATTTG...ACTGATGACACAACATCTGAATGCACACTTACTGGCCAACACGTGCTTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS-3UTR CAA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAAGAGGCTGGTGGCTGTaGGCCCAAGATCATAAATGG +
Preference number: 5 (lower is better)
Translates to: IVEPTQMPISQQVVYIYIRGWWL*AQDHKW
Trigger: CCATTTATGATCTTGGGCCAACAGCCACCAGCCTCT...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp TTCATGTGCAGGTTTTCTGTGTGGACATGTTTTCAACTCCTTTGGGTAAACACCTCAGTCTTCTGGATTTaGGCCATTCTGATAGGTGTG +
Preference number: 5 (lower is better)
Translates to: FMCRFSVWTCFQLLWVNTSVFWI*AILIGV
Trigger: CACACCTATCAGAATGGCCAAAATCCAGAAGACTGA...GGTGTTTACCCAAAGGAGTTGAAAACATGTCCACACAGAAAACCTGCACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCAAGATGGGTACAACTATaGTTCTCTGCCTCATTGGAT +
Preference number: 5 (lower is better)
Translates to: FTALKFVCILPVHPSLHPRWVQL*FSASLD
Trigger: ATCCAATGAGGCAGAGAACAATAGTTGTACCCATCT...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp AACAGCAGGGATAGCCAACATTTGCAAATAATAATGCAACAGTTGGGCCGGGAGAGGGATAGCCAACATTaGCAAATAATAATGCAACAG +
Preference number: 5 (lower is better)
Translates to: NSRDSQHLQIIMQQLGRERDSQH*QIIMQQ
Trigger: CTGTTGCATTATTATTTGCAAATGTTGGCTATCCCT...CTCCCGGCCCAACTGTTGCATTATTATTTGCAAATGTTGGCTATCCCTGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp AATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATGCAGATTTTGCTGCTTaGCAGTGGGGGAAGCAACTA +
Preference number: 5 (lower is better)
Translates to: NRGTNPNAHQSTSGIYIYADFAA*QWGKQL
Trigger: TAGTTGCTTCCCCCACTGCAAAGCAGCAAAATCTGC...ATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp ATCGTGGAACCAACCCAAATGCCCATCAGTCAACAAGTGGTATATATATATATAGAGAGAAATGGGCTTTaGGGTTCCAAGTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: IVEPTQMPISQQVVYIYIERNGL*GSKFCQ
Trigger: CTGACAGAACTTGGAACCCAAAAGCCCATTTCTCTC...TATATATATATATACCACTTGTTGACTGATGGGCATTTGGGTTGGTTCCACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGGGCTACGTGAAGCCTTaGAGAGCAGATTTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRGYVKP*RADFAA
Trigger: AGCAGCAAAATCTGCTCTCAAAGGCTTCACGTAGCC...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp TTCACTGCCCTAAAATTTGTTTGTATTCTGCCTGTTCATCCCTCCCTTCATCCAGGTTGCTTCCAATTTTaGGCAATTTTGAGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: FTALKFVCILPVHPSLHPGCFQF*AILSKA
Trigger: AGCTTTACTCAAAATTGCCAAAAATTGGAAGCAACC...TGGATGAAGGGAGGGATGAACAGGCAGAATACAAACAAATTTTAGGGCAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp GACATAGGAATTAACATATATCTTAAGGTATACCATGTCAATCACAGCAAGAGGCATTGGATTTTAGCTTaGGTCATGATAGCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: DIGINIYLKVYHVNHSKRHWILA*VMIAVG
Trigger: GCCAACTGCTATCATGACCAAAGCTAAAATCCAATG...CCTCTTGCTGTGATTGACATGGTATACCTTAAGATATATGTTAATTCCTATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS-3UTR CAA 90 bp TTAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCATTACTGGGTATCATTTTAGCTACTTACTaGTTTCTTACCTGTCACTCC +
Preference number: 5 (lower is better)
Translates to: LELKVELPFDPAIPLLGIILATY*FLTCHS
Trigger: GGAGTGACAGGTAAGAAACAAGTAAGTAGCTAAAAT...GATACCCAGTAATGGGATTGCTGGATCAAATGGTAGTTCTACTTTTAGTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274192.7
CDS CAA 72 bp AGATCCGGGCAGACAATGGGTACCATGGGCTGGCATTaGGGATGTAGGCACACTGCAAGTGCTTGCATACCA +
Preference number: 6 (lower is better)
Translates to: RSGQTMGTMGWH*GCRHTASACIP
Trigger: TGGTATGCAAGCACTTGCAGTGTGCCTACATCCCAAATGCCAGCCCATGGTACCCATTGTCTGCCCGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS TCA 72 bp CGAATCCCAGCAATTTCTCTCTGCGTCTTGGAATCATaGTTCAGATCCGGGCAGACAATGGGTACCATGGGC +
Preference number: 6 (lower is better)
Translates to: RIPAISLCVLES*FRSGQTMGTMG
Trigger: GCCCATGGTACCCATTGTCTGCCCGGATCTGAATCATGATTCCAAGACGCAGAGAGAAATTGCTGGGATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS CCA 72 bp AATCATGATTCAGATCCGGGCAGACAATGGGTACCATaGGCTGGCATTTGGGATGTAGGCACACTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: NHDSDPGRQWVP*AGIWDVGTLQV
Trigger: CACTTGCAGTGTGCCTACATCCCAAATGCCAGCCCATGGTACCCATTGTCTGCCCGGATCTGAATCATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5
CDS GCA 72 bp CCTCAGAGAACATGGGGAGGCATAAATCGTGTGATCTaGACAGGAACTCAAAAGCCTGTTCTTCCTCTATTA +
Preference number: 6 (lower is better)
Translates to: PQRTWGGINRVI*TGTQKPVLPLL
Trigger: TAATAGAGGAAGAACAGGCTTTTGAGTTCCTGTGCAGATCACACGATTTATGCCTCCCCATGTTCTCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504286.1
CDS CCA 72 bp AAGAACAACGAATCCCAGCAATTTCTCTCTGCGTCTTaGAATCATGATTCAGATCCGGGCAGACAATGGGTA +
Preference number: 6 (lower is better)
Translates to: KNNESQQFLSAS*NHDSDPGRQWV
Trigger: TACCCATTGTCTGCCCGGATCTGAATCATGATTCCAAGACGCAGAGAGAAATTGCTGGGATTCGTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510531.5