RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRCAP (Homo sapiens)

Ensembl gene IDs: ENSG00000080603

Ensembl transcript IDs: ENST00000262518.9, ENST00000395059.6, ENST00000411466.6, ENST00000474008.1, ENST00000483083.3

Found 1004 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCTCTACTCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTaGTCAGGTAAAAACCAAAGGTGGAGTCAATGGCACTGGTGGAAG +
Preference number: 1 (lower is better)
Translates to: SLYSLLPTSQDQPSG*SGKNQRWSQWHWWK
Trigger: CTTCCACCAGTGCCATTGACTCCACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGAGTAGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR GCA 90 bp ACATCAGAAAGACTTTACTTCCCTAAGTCAGGGCTTCCTCTGCTATaGTGCCTCCCTGCCACCTCCTCTCTCCAATTTAACCCAGGCCAC +
Preference number: 1 (lower is better)
Translates to: TSERLYFPKSGLPLL*CLPATSSLQFNPGH
Trigger: GTGGCCTGGGTTAAATTGGAGAGAGGAGGTGGCAGGGAGGCAGCATAGCAGAGGAAGCCCTGACTTAGGGAAGTAAAGTCTTTCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR GCA 90 bp TCAGAAAGACTTTACTTCCCTAAGTCAGGGCTTCCTCTGCTATGCTaGCTCCCTGCCACCTCCTCTCTCCAATTTAACCCAGGCCACATA +
Preference number: 1 (lower is better)
Translates to: SERLYFPKSGLPLLC*LPATSSLQFNPGHI
Trigger: TATGTGGCCTGGGTTAAATTGGAGAGAGGAGGTGGCAGGGAGGCAGCATAGCAGAGGAAGCCCTGACTTAGGGAAGTAAAGTCTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR GCA 90 bp CTGTATTTCAAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTaGCCCCTGAGTATTATAGATGTCAGAGAGCAGGACCCTAGGTAC +
Preference number: 1 (lower is better)
Translates to: LYFKGLYNSPKFPRG*PLSIIDVREQDPRY
Trigger: GTACCTAGGGTCCTGCTCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTTGAAATACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR TCA 90 bp GGACCCACTGGACCTTCCTTCTCCTTAGTTCTGGTTTACTTAAGCTaGACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATA +
Preference number: 1 (lower is better)
Translates to: GPTGPSFSLVLVYLS*TVSLTQVLHRHGPI
Trigger: TATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAAACCAGAACTAAGGAGAAGGAAGGTCCAGTGGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR CCA 90 bp CGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTaGTCCATAACATTAAGCTTTGTAATTCACCAGGTTAAATGTGAC +
Preference number: 1 (lower is better)
Translates to: RPGKRRDLSKCHSST*SITLSFVIHQVKCD
Trigger: GTCACATTTAACCTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR CAA 90 bp GTGATGGAGCTGACTCAGGGCTCCAAGCCAAGCCCAGGGGTGGGGTaGAGTGGCCAGCCACCACGTGAAGAGCCCAGGGAGCTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VMELTQGSKPSPGVG*SGQPPREEPRELGR
Trigger: CCTTCCCAGCTCCCTGGGCTCTTCACGTGGTGGCTGGCCACTCAACCCCACCCCTGGGCTTGGCTTGGAGCCCTGAGTCAGCTCCATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR CAA 90 bp TTGAAGGACTCTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTaGGGTGGTGATGGAGCTGACTCAGGGCTCCAAGCCAAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LKDSEFRLLPQLWFG*GGDGADSGLQAKPR
Trigger: CCTGGGCTTGGCTTGGAGCCCTGAGTCAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAGAGTCCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR TCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGACCAGTTTGGCTAGATaGAGAGCAGGGGAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELTSLAR*RAGEGP
Trigger: TGGGCCCTCCCCTGCTCTTCATCTAGCCAAACTGGT...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTACCCCCTACTTTGGTaGGAAGAAGGGAGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELYPLLW*EEGRRP
Trigger: GGGCCTTCTCCCTTCTTCCCACCAAAGTAGGGGGTA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR TCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGTGAAAGGAAGCACCTaGGCAAGAGGGATAAAAGGG +
Preference number: 2 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELVKGST*ARGIKG
Trigger: CCCTTTTATCCCTCTTGCTCAGGTGCTTCCTTTCAC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCTTCCTCTGCTATGCTaGCTCCCTGCCACCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVLPLLC*LPATSS
Trigger: AGAGGAGGTGGCAGGGAGGCAGCATAGCAGAGGAAG...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTAGTCAGGGCTTCCTCTaGTATGCTGCCTCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCSQGFL*YAASLP
Trigger: TGGCAGGGAGGCAGCATAGCAGAGGAAGCCCTGACT...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCACTGCCCAGCCACGTaGGGTGAAGGGGAAGGGGAC +
Preference number: 2 (lower is better)
Translates to: PHYHTETCKMMPYLIISCHCPAT*GEGEGD
Trigger: GTCCCCTTCCCCTTCACCCCACGTGGCTGGGCAGTG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR TCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGGAGGGCCCAGGGAGTaGACAGAGAATGTAAAAATG +
Preference number: 2 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVGGPRE*TENVKM
Trigger: CATTTTTACATTCTCTGTTCACTCCCTGGGCCCTCC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR GCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACAGGACCCTAGGTACTaGAACCCGTTTCAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRQDPRY*NPFQAK
Trigger: CTTTGCTTGAAACGGGTTGCAGTACCTAGGGTCCTG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR CAA 90 bp GGGAAAGGCACCCTACCACATCAAATTCACCAATCTTCCCTCTTCTaGGGTAGATTTCTGCCTGGAACATATAGTCCTGGGCTAGAGATC +
Preference number: 2 (lower is better)
Translates to: GKGTLPHQIHQSSLF*GRFLPGTYSPGLEI
Trigger: GATCTCTAGCCCAGGACTATATGTTCCAGGCAGAAATCTACCCAAGAAGAGGGAAGATTGGTGAATTTGATGTGGTAGGGTGCCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTTCCATGACAACCAGTTaGCTACCCCCTACTTTGGTG +
Preference number: 2 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCSMTTS*LPPTLV
Trigger: CACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGA...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGCAAAGAATGATGTGTaGCAAGAAGCTGCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVAKNDV*QEAAGK
Trigger: CTTCCCTGCAGCTTCTTGGCACACATCATTCTTTGC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGCCCCTATGTCTCCCTaGAGGCTTTCCCCCTCAAGA +
Preference number: 2 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMAPMSP*RLSPSR
Trigger: TCTTGAGGGGGAAAGCCTCCAGGGAGACATAGGGGC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAAGGTCCTCTAGGCCCTaGCATCAAACCACCTTTCTA +
Preference number: 2 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIRSSRP*HQTTFL
Trigger: TAGAAAGGTGGTTTGATGCCAGGGCCTAGAGGACCT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCAAAGGTGGAGTCAATaGCACTGGTGGAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSQRWSQ*HWWKVG
Trigger: CCCCACCTTCCACCAGTGCCATTGACTCCACCTTTG...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR-3UTR CCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGGGTAAAAACCAAAGGTaGAGTCAATGGCACTGGTGG +
Preference number: 2 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQGKNQR*SQWHWW
Trigger: CCACCAGTGCCATTGACTCCACCTTTGGTTTTTACC...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR-3UTR TCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAGGAAAAGGATATCTGTaGCTTCAAACTGACTGGGGA +
Preference number: 2 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRGKGYL*LQTDWG
Trigger: TCCCCAGTCAGTTTGAAGTCACAGATATCCTTTTCC...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGCCTACCCCCTACTTTaGTGGGAAGAAGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMAYPLL*WEEGRR
Trigger: CCTTCTCCCTTCTTCCCACCAAAGTAGGGGGTAGGC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATATGTGTGAAAGACAGCTaGGGAATCAAGTACAAGGGG +
Preference number: 2 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIICVKDS*GIKYKG
Trigger: CCCCTTGTACTTGATTCCCCAGCTGTCTTTCACACA...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTAAGAGCCCAGGGAGCTaGGAAGGGGTGTGGCTGACT +
Preference number: 2 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGKSPGS*EGVWLT
Trigger: AGTCAGCCACACCCCTTCCCAGCTCCCTGGGCTCTT...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR CAA 90 bp TTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTaGTCTCCCTACTTCTCAGGTCCTCTAGGCCCTGGCATCAAACCA +
Preference number: 2 (lower is better)
Translates to: LPHRNLQNDALLNHF*SPYFSGPLGPGIKP
Trigger: TGGTTTGATGCCAGGGCCTAGAGGACCTGAGAAGTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR TCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATACTCTGGAAAAAGTTGTaGAAGGAAGCACCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIILWKKL*KEAPEQ
Trigger: TTGCTCAGGTGCTTCCTTTCACAACTTTTTCCAGAG...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR TCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCCTGGCTATAGGCCTTaGAGGACTCTGAGTTTCGGC +
Preference number: 2 (lower is better)
Translates to: PHYHTETCKMMPYLIISCPGYRP*RTLSFG
Trigger: GCCGAAACTCAGAGTCCTTCAAGGCCTATAGCCAGG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR TCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGGGAAGGGGTGTGGCTaGCTCAAACCAGTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGGKGCG*LKPVWL
Trigger: TAGCCAAACTGGTTTGAGTCAGCCACACCCCTTCCC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTAGCTTTGGTTTGGCTTaGGTGGTGATGGAGCTGACT +
Preference number: 2 (lower is better)
Translates to: PHYHTETCKMMPYLIISCSFGLA*VVMELT
Trigger: AGTCAGCTCCATCACCACCCAAGCCAAACCAAAGCT...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTCAAGTACAAGGGGGTaGGGACAGAGACTATCTTGC +
Preference number: 2 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGSSTRG*GQRLSC
Trigger: GCAAGATAGTCTCTGTCCCCACCCCCTTGTACTTGA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTGTGTGCCAAGAAGCTaGAGGGAAGTAGATACAAAG +
Preference number: 2 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGCVPRS*REVDTK
Trigger: CTTTGTATCTACTTCCCTGCAGCTTCTTGGCACACA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR CCA 72 bp TTGAAGGACTCTGAGTTTCGGCTCCTGCCTCAGCTTTaGTTTGGCTTGGGTGGTGATGGAGCTGACTCAGGG +
Preference number: 3 (lower is better)
Translates to: LKDSEFRLLPQL*FGLGGDGADSG
Trigger: CCCTGAGTCAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAGAGTCCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR TCA 72 bp CAGGGCTCTTACCTGGCTATAGGCCTTGAAGGACTCTaGGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTT +
Preference number: 3 (lower is better)
Translates to: QGSYLAIGLEGL*VSAPASALVWL
Trigger: AAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAGAGTCCTTCAAGGCCTATAGCCAGGTAAGAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR CCA 72 bp CAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTaGACCTTCCTTCTCCTTAGTTCTGGTTTACTTAAG +
Preference number: 3 (lower is better)
Translates to: QWGKARGRGGTH*TFLLLSSGLLK
Trigger: CTTAAGTAAACCAGAACTAAGGAGAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR GCA 72 bp GGGACTGTGATGATCCCCATTTCCATGACAACCAGTTaGCTACCCCCTACTTTGGTGGGAAGAAGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: GTVMIPISMTTS*LPPTLVGRREK
Trigger: CTTCTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCACAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR GCA 72 bp CTTTACTTCCCTAAGTCAGGGCTTCCTCTGCTATGCTaGCTCCCTGCCACCTCCTCTCTCCAATTTAACCCA +
Preference number: 3 (lower is better)
Translates to: LYFPKSGLPLLC*LPATSSLQFNP
Trigger: TGGGTTAAATTGGAGAGAGGAGGTGGCAGGGAGGCAGCATAGCAGAGGAAGCCCTGACTTAGGGAAGTAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR CCA 72 bp TCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTaGTCAGGTAAAAACCAAAGGTGGAGTCAATGGCAC +
Preference number: 3 (lower is better)
Translates to: SLLPTSQDQPSG*SGKNQRWSQWH
Trigger: GTGCCATTGACTCCACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR-3UTR CAA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTATGTCACTCAAGTACTaGGTCCATAACATTAAGCTT +
Preference number: 3 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPMSLKY*VHNIKL
Trigger: AAGCTTAATGTTATGGACCAAGTACTTGAGTGACAT...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR CCA 72 bp TTTCTTGTCTCCCTACTTCTCAGGTCCTCTAGGCCCTaGCATCAAACCACCTTTCTACCCTTATCTCCAACC +
Preference number: 3 (lower is better)
Translates to: FLVSLLLRSSRP*HQTTFLPLSPT
Trigger: GGTTGGAGATAAGGGTAGAAAGGTGGTTTGATGCCAGGGCCTAGAGGACCTGAGAAGTAGGGAGACAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR GCA 72 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTaGCCCCTGAGTATTATAGATGTCAGAGAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: KGLYNSPKFPRG*PLSIIDVREQD
Trigger: GTCCTGCTCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CAA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGTGCCTACCCCCTACTTaGGTGGGAAGAAGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMCLPPT*VGRREK
Trigger: CTTCTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCA...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CAA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATACAATCTTCCCTCTTCTaGGGTAGATTTCTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIQSSLF*GRFLPG
Trigger: TCCAGGCAGAAATCTACCCAAGAAGAGGGAAGATTG...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR TCA 72 bp AAGGTGAAAGGGGCGAGACAAGTAGAGAGCAAAGAATaGTGTGTGCCAAGAAGCTGCAGGGAAGTAGATACA +
Preference number: 3 (lower is better)
Translates to: KVKGARQVESKE*CVPRSCREVDT
Trigger: TGTATCTACTTCCCTGCAGCTTCTTGGCACACATCATTCTTTGCTCTCTACTTGTCTCGCCCCTTTCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR TCA 72 bp CTACAACCCAGACAAAATGAAACCACCTTGGCTCCCTaGACCCAAGTAACGAAGGATAGGAAAGGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: LQPRQNETTLAP*TQVTKDRKGER
Trigger: CCTTTCACCTTTCCTATCCTTCGTTACTTGGGTTCAGGGAGCCAAGGTGGTTTCATTTTGTCTGGGTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR GCA 72 bp AGTATTATAGATGTCAGAGAGCAGGACCCTAGGTACTaGAACCCGTTTCAAGCAAAGCAGCCATTTTACATG +
Preference number: 3 (lower is better)
Translates to: SIIDVREQDPRY*NPFQAKQPFYM
Trigger: CATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCTAGGGTCCTGCTCTCTGACATCTATAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CAA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTTTCCATGACAACCAGTaGCCTACCCCCTACTTTGGT +
Preference number: 3 (lower is better)
Translates to: PHYHTETCKMMPYLIISCFHDNQ*PTPYFG
Trigger: ACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAA...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR-3UTR CAA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCAGGTGCTAGGATCTTaGCAAGAACAAGAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: PHYHTETCKMMPYLIISCQVLGS*QEQEGG
Trigger: TCCTCCCTCTTGTTCTTGCAAAGATCCTAGCACCTG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR TCA 72 bp GGACCTTCCTTCTCCTTAGTTCTGGTTTACTTAAGCTaGACTGTGAGTTTAACTCAAGTACTACACAGACAT +
Preference number: 3 (lower is better)
Translates to: GPSFSLVLVYLS*TVSLTQVLHRH
Trigger: ATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAAACCAGAACTAAGGAGAAGGAAGGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR CCA 72 bp AAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTaGTCCATAACATTAAGCTTTGTAATTCACCAGGTT +
Preference number: 3 (lower is better)
Translates to: KRRDLSKCHSST*SITLSFVIHQV
Trigger: AACCTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGAGGGAGGGGCGCTGCTaGGCAGGATGCGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWREGRC*AGCAGP
Trigger: GGGACCAGCGCATCCTGCGCAGCAGCGCCCCTCCCT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTGCAGCGGGCGGGGCTaGCCCACAGCAAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELCSGRG*PTASWR
Trigger: GCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGCGGAGGCCGGGGTGCTaGGGCCAATGGAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWRRPGC*GQWRNR
Trigger: CCTGTTCCTCCATTGGCCCCAGCACCCCGGCCTCCG...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGCCCAGGGGTGGGGTTaGGTGGCCAGCCACCACGTG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELAQGWG*VASHHV
Trigger: CACGTGGTGGCTGGCCACTCAACCCCACCCCTGGGC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGGTGCCGGATCACCATaGGCACCACCTTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWGAGSP*APPSGP
Trigger: TGGCCCGGAAGGTGGTGCGCATGGTGATCCGGCACC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGCGCCAAGGTCTGAGCTaGGGCCGGGCCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELRQGLS*GRAQGR
Trigger: CCTACCCTGGGCCCGGCCGCAGCTCAGACCTTGGCG...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTACTGCGCCGGTGGGTaGCTCCACCAGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWYCAGG*LHQSHR
Trigger: CCTGTGGGACTGGTGGAGGCACCCACCGGCGCAGTA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTGGTACTCCCGGAGCTaGCCCCGCAGAAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWWYSRS*PRRSRG
Trigger: TCCCCTGCTTCTGCGGGGCCAGCTCCGGGAGTACCA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGCCTGGAGGTGGGGCTaGGCTCAGGCGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELAWRWG*AQANWG
Trigger: GCCCCAGTTCGCCTGAGCCCAGCCCCACCTCCAGGC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCCGGAGGCCGGGGTGCTaGGGCCAATGGAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFRRPGC*GQWRNR
Trigger: CCTGTTCCTCCATTGGCCCCAGCACCCCGGCCTCCG...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTGGGAACTCGCTCCCTaGCAGGACTGCAGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWWELAP*QDCSGV
Trigger: CACCCCGCTGCAGTCCTGCCAGGGAGCGAGTTCCCA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGAGGGGTGGGCTGGGCTaGGAGCTCAGGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELRGGLG*ELRTWR
Trigger: CCTCCAGGTCCTGAGCTCTCAGCCCAGCCCACCCCT...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGTGTGGTTTGCCCCTTaGGTCTCAGCCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWVWFAP*VSARAP
Trigger: TGGAGCCCGGGCTGAGACTCAAGGGGCAAACCACAC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTGCACCACATTCCTTTaGAGCGGGCGGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPCTTFL*SGRGCP
Trigger: GGGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCA...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGAGCTGGCCTCATTCTaGGCCACCGGCCACCGGGAC +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELELASF*ATGHRD
Trigger: GTCCCGGTGGCCGGTGGCCCAGAATGAGGCCAGCTC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGAGACGGGGAGCTGGCTaGGCCGAGGTGATGGAGGAT +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWRRGAG*AEVMED
Trigger: ATCCTCCATCACCTCGGCCCAGCCAGCTCCCCGTCT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGAGTCAGGCCTGGTCATaGAGGGAGTGGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWSQAWS*REWPRW
Trigger: CCACCGTGGCCACTCCCTCCATGACCAGGCCTGACT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTGCACCACATTCCTTTaGAGCGGGCGGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELCTTFL*SGRGCP
Trigger: GGGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGAGGCGTTCAGACCGCTaGCGCTTCCGCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWRRSDR*RFRFSS
Trigger: GGAGGAAAAGCGGAAGCGGCAGCGGTCTGAACGCCT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCAGCAGCACCTGGCGATaGTGCCAGGACCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFSSTWR*CQDRKR
Trigger: CCTCTTCCGGTCCTGGCACCATCGCCAGGTGCTGCT...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTGCCGGGATACCATGGTaGCAGGCAAGGGAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFAGIPW*QARERH
Trigger: GTGCCGCTCCCTTGCCTGTCACCATGGTATCCCGGC...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTGTGACGGCGAGCAATaGAGGGCTGCTGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELCDGEQ*RAAGVE
Trigger: CTCCACCCCAGCAGCCCTTCATTGCTCGCCGTCACA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCAGGAGGCCCACTGCCTaGATCTGCCTCACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFRRPTA*ICLTLL
Trigger: GAGCAGAGTGAGGCAGATGCAGGCAGTGGGCCTCCT...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTGCTAGGGCCAGTGTCTaGGTAGAAGCCGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFARASV*VEAGLG
Trigger: CCCGAGCCCGGCTTCTACGCAGACACTGGCCCTAGC...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGAGGGCAGCAATTTCCTaGTCAGCCCGGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWRAAIS*SARDIS
Trigger: GGAGATGTCCCGGGCTGAGCAGGAAATTGCTGCCCT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGCAGGGACTCTGGAGATaGCAATGCCTGGGCACACAG +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWQGLWR*QCLGTQ
Trigger: CTGTGTGCCCAGGCATTGGCATCTCCAGAGTCCCTG...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCACTGTTGGGCTGCAGTaGAGGCAAGAGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFTVGLQ*RQEDRA
Trigger: GGCCCTGTCCTCTTGCCTCCACTGCAGCCCAACAGT...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTGGATGAGGGCCACATaGGCAGGCTGGCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWWMRAT*AGWLMR
Trigger: TCTCATCAGCCAGCCTGCCCATGTGGCCCTCATCCA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTCACCAGAGTGGGTGTaGGCATGGGGGCTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELSPEWV*AWGLEQ
Trigger: CTGCTCGAGCCCCCATGCCCACACCCACTCTGGTGA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCAGGTCCAGGAGCCGCTaGGACAACAGGTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFRSRSR*DNRCQW
Trigger: CCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCT...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGCCTGCTCTTGACCATTaGGGATGCTGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWPALDH*GCCQPP
Trigger: TGGAGGCTGGCAGCATCCCCAATGGTCAAGAGCAGG...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGCTCAGGCCCAGGGACTaGGTCAGCCCCATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWLRPRD*VSPIGF
Trigger: AAAACCAATGGGGCTGACCCAGTCCCTGGGCCTGAG...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGTGATGGAGGATTCTTaGGAGGTCGGCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWVMEDS*EVGPSS
Trigger: GGAAGAGGGGCCGACCTCCCAAGAATCCTCCATCAC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTCCAAGACGGGGAGCTaGCTGGGCCGAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELSKTGS*LGRGDG
Trigger: TCCATCACCTCGGCCCAGCCAGCTCCCCGTCTTGGA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGATGCGCTGGTCCCCTTaGTTGGTGGTCCCAACAAGC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWMRWSP*LVVPTS
Trigger: GCTTGTTGGGACCACCAACCAAGGGGACCAGCGCAT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGCCCCTATGTCTCCCTaGAGGCTTTCCCCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWAPMSP*RLSPSR
Trigger: TCTTGAGGGGGAAAGCCTCCAGGGAGACATAGGGGC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTAACAGTCAAGGGGGCTaGGATGGGGATGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPNSQGG*DGDGEW
Trigger: CCACTCACCATCCCCATCTCAGCCCCCTTGACTGTT...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGAGGTCGGGCAGGTaGAGGACCCTCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYRRSGR*RTLRRG
Trigger: TCCTCGCCTGAGGGTCCTTCACCTGCCCGACCTCCT...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGGGGAGGGGCTGCTCTaGATGGTCCCACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGGEGLL*MVPLPG
Trigger: GCCTGGGAGTGGGACCATGCAGAGCAGCCCCTCCCC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGCTCGGAGGCCGGGGTaGTGGGGCCAATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQARRPG*WGQWRN
Trigger: GTTCCTCCATTGGCCCCAGCACCCCGGCCTCCGAGC...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTGCTCGGAGGCCGGGGTaGTGGGGCCAATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGARRPG*WGQWRN
Trigger: GTTCCTCCATTGGCCCCAGCACCCCGGCCTCCGAGC...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACGCTAGGGCCAGTGTCTaGGTAGAAGCCGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYARASV*VEAGLG
Trigger: CCCGAGCCCGGCTTCTACGCAGACACTGGCCCTAGC...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTTACACACAATACGGTaGAAAGGACGAGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWLHTIR*KGRARG
Trigger: GCCCCGGGCTCGTCCTTTGCACCGTATTGTGTGTAA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGCTTGACCATTGGGGATaGTGCCAGCCTCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWLDHWG*CQPPRS
Trigger: TGACCTTGGAGGCTGGCAGCATCCCCAATGGTCAAG...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACCCCAGGCACTAGGGTaGTGGCAGCTCCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGPQALG*WQLPAA
Trigger: AGCAGCGGGGAGCTGCCAGCACCCTAGTGCCTGGGG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGCGAGCAATGAAGGGCTaGTGGGGTGGAGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELRAMKG*WGGVGS
Trigger: ACTGCCCACTCCACCCCAGCAGCCCTTCATTGCTCG...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACTGCCGCTGCTCCTCGTaGTGCCGGATCACCATGCGC +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYCRCSS*CRITMR
Trigger: GCGCATGGTGATCCGGCACCACGAGGAGCAGCGGCA...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTCTAGCCCAATGTGCTaGTACTCCCGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELSSPMC*YSRSWP
Trigger: GGGCCAGCTCCGGGAGTACCAGCACATTGGGCTAGA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGGGGATGGACATCCGTaGCCCTTAGCACCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELGDGHP*PLAPER
Trigger: CCTCTCTGGTGCTAAGGGCCACGGATGTCCATCCCC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGTCGGGGCCACGGCCTaGATGAGGGCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGVGATA*MRATWA
Trigger: TGCCCATGTGGCCCTCATCCAGGCCGTGGCCCCGAC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCGTTGGAAAGGGTCCCTaGGGGTTCCCCGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFVGKGP*GFPVPK
Trigger: TTTGGGAACGGGGAACCCCCAGGGACCCTTTCCAAC...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACCGTGTGAGCTGGGGCTaGGCCCACTGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYRVSWG*AHWRSW
Trigger: CCAGCTTCTCCAGTGGGCCCAGCCCCAGCTCACACG...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGATTGGGTCTGTGAACTaGCTGGGGTCCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWIGSVN*LGSKRL
Trigger: CAGCCTCTTGGACCCCAGCCAGTTCACAGACCCAAT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTACCCCCTACTTTGGTaGGAAGAAGGGAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWYPLLW*EEGRRP
Trigger: GGGCCTTCTCCCTTCTTCCCACCAAAGTAGGGGGTA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGGTGGCCCTCTGCCTTaGGCTGCCGCAACAGCACTG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQGGPLP*AAATAL
Trigger: CAGTGCTGTTGCGGCAGCTCAAGGCAGAGGGCCACC...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACCCCCCTGTGAAAGTCTaGACTTCCACGGTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYPPVKV*TSTVPP
Trigger: CGGCGGCACCGTGGAAGTGCAGACTTTCACAGGGGG...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAGGGCTGGCGTCCGGCTaGAGGGCATGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRGLASG*RACWEL
Trigger: CAGCTCCCAGCATGCCCTGCAGCCGGACGCCAGCCC...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGCCCGTTCCTCTTTCTaGCGCTGCTCCTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRREARSSF*RCSSWC
Trigger: GCACCACGAGGAGCAGCGGCAGAAAGAGGAACGGGC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGGGAAGAGCCTGCTTTaGTGGAGGTTAATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWGKSLL*WRLMAG
Trigger: ACCAGCCATTAACCTCCAGCAAAGCAGGCTCTTCCC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATGCAGCGGGCGGGGCTaGCCCACAGCAAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITCSGRG*PTASWR
Trigger: GCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCA...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGAGAAGGAGCCAGAATTaGTGTCTGTGGAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWRRSQN*CLWSRH
Trigger: ATGGCGGCTCCACAGACAGCAATTCTGGCTCCTTCT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGGGTCGAGGCCTAGGTaGTGGCCTGGGAACTCGCTC +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGGSRPR*WPGNSL
Trigger: GAGCGAGTTCCCAGGCCAGCACCTAGGCCTCGACCC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTGGGGATGGACATCCGTaGCCCTTAGCACCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFGDGHP*PLAPER
Trigger: CCTCTCTGGTGCTAAGGGCCACGGATGTCCATCCCC...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTGGGACAAGGTTGGCGTaGGAGGCCGTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGGTRLA*EAVRSH
Trigger: GTGGGACCTCACGGCCTCCCACGCCAACCTTGTCCC...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTCAGGTGAAGGACTGTaGACCAGCTTGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWSGEGL*TSLRRG
Trigger: GCCTCTTCTCAAGCTGGTCCACAGTCCTTCACCTGA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCAGTTGGACCCAGTGGTaGTCCTGGTGCCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFSWTQW*SWCQRQ
Trigger: CTGTCTTTGGCACCAGGACCACCACTGGGTCCAACT...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGTGGGGCTGGGCCCACTaGAGAAGCTGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQWGWAH*RSWSQR
Trigger: CCTCTGGCTCCAGCTTCTCCAGTGGGCCCAGCCCCA...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTGGCATAGCGCTCAATaGGGGTCAGCTGTTCTACGA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWWHSAQ*GSAVLR
Trigger: TCGTAGAACAGCTGACCCCCATTGAGCGCTATGCCA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACGCTGGTCCCCTTGGTTaGTGGTCCCAACAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYAGPLG*WSQQAG
Trigger: GCCGGCTTGTTGGGACCACCAACCAAGGGGACCAGC...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACCTGCGCAGGATGCGCTaGTCCCCTTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYLRRMR*SPWLVV
Trigger: GACCACCAACCAAGGGGACCAGCGCATCCTGCGCAG...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR CAA 72 bp AGGACTCTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTaGGCTTGGGTGGTGATGGAGCTGACTCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RTLSFGSCLSFG*AWVVMELTQGS
Trigger: GGAGCCCTGAGTCAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAGAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGGAGGGCCCAGGGAGTaGACAGAGAATGTAAAAATG +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWGGPRE*TENVKM
Trigger: CATTTTTACATTCTCTGTTCACTCCCTGGGCCCTCC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTGATAGCGCCAGTTCTTaGGACGGAAGGCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFDSASS*DGRPGG
Trigger: ACCACCAGGCCTTCCGTCGCAAGAACTGGCGCTATC...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGAACCACTGTTGGGCTaGAGTGGAGGCAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELEPLLG*SGGKRT
Trigger: TGTCCTCTTGCCTCCACTGCAGCCCAACAGTGGTTC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGCCTGCTGACACGAGGTaGACCACATTCCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELPADTR*TTFLCS
Trigger: GCTGCAAAGGAATGTGGTGCACCTCGTGTCAGCAGG...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCTCCATTCTCGGGGCTaGCACCACCAGTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGLHSRG*HHQSPP
Trigger: TGGGGGTGACTGGTGGTGGCAGCCCCGAGAATGGAG...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGATGGGCAAATCTCGTaGTTTAGGGGGTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELDGQIS*FRGSSS
Trigger: CGAGGACGACCCCCTAAAGCACGAGATTTGCCCATC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTTCCACGGGCCCCTCTaGTTCACAGTCAGAGCTATT +
Preference number: 4 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPFHGPL*FTVRAI
Trigger: AATAGCTCTGACTGTGAACCAGAGGGGCCCGTGGAA...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTCCTCTTCATCTGCTTaGCTCTGTGATTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWSSSSA*LCDWAS
Trigger: GGATGCCCAATCACAGAGCCAAGCAGATGAAGAGGA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTTTGCGACGGAAGGCCTaGTGGTCCTGCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGLRRKA*WSCSTS
Trigger: GCTGGTGCTGCAGGACCACCAGGCCTTCCGTCGCAA...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTGGCTTGGGCCGGGGTaGGGGGTCAGGAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVWLGPG*GVRSSS
Trigger: GCTACTGCTCCTGACCCCCCACCCCGGCCCAAGCCA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTGGAGGAGGTCGAACTaGGACAGGGCCCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVWRRSN*DRAQGR
Trigger: GCGCCCCTGGGCCCTGTCCCAGTTCGACCTCCTCCA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACGCCACATGGGCAGGCTaGCTGATGAGATGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYATWAG*LMRWCC
Trigger: GCAGCACCATCTCATCAGCCAGCCTGCCCATGTGGC...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGTTGGGAATTGGCATTaGAGAAGAGGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELVGNWH*RRGWPR
Trigger: CCTGGGCCAGCCTCTTCTCCAATGCCAATTCCCAAC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTACTGGTCAACAGAGCTaGGCCCGAAGCAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPTGQQS*ARSRNS
Trigger: ACTGTTTCTGCTTCGGGCCCAGCTCTGTTGACCAGT...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGTCCAGGAGCCGCTaGGACAACAGGTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYRSRSR*DNRCQW
Trigger: CCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCT...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCTGTCAGGCTCATCCTTaGAAACAGGCAGCCGGGATA +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFCQAHP*KQAAGI
Trigger: TATCCCGGCTGCCTGTTTCCAAGGATGAGCCTGACA...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAGAGGGCCGATGGGGCTaGCAACAGGTTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQREGRWG*QQVGAG
Trigger: CCCTGCCCCAACCTGTTGCCAGCCCCATCGGCCCTC...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACCACCTGTTCAGCCTTaGCCTGGGTGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGPPVQP*PGWLHG
Trigger: TCCGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGAGACCTGTTCTTCTTaGGGGGCCTCCCCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQETCSS*GASPSD
Trigger: GTCGGAGGGGGAGGCCCCCCAAGAAGAACAGGTCTC...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGCCAGGACGTCGGCGTaGGGTCCCATCCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVARTSA*GPIPFL
Trigger: GAGGAAGGGGATGGGACCCCACGCCGACGTCCTGGC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGTCATCCTCTTGGGGTTaGAAGTCCCCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWSSSWG*KSPSSS
Trigger: TGATGAAGATGGGGACTTTCAACCCCAAGAGGATGA...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACGACTGTGGACCAGCTTaGGAAGAGGCCTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYDCGPA*EEASPE
Trigger: CTCTGGTGAGGCCTCTTCTCAAGCTGGTCCACAGTC...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGCTGGTAGCATAGTTTaGGTTGATGATGGAGCCAAC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWAGSIV*VDDGAN
Trigger: GTTGGCTCCATCATCAACTCAAACTATGCTACCAGC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGCCTCCAGTGGCTCCTaGAGTGGCTCATCAGATGCT +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRREASSGS*SGSSDA
Trigger: AGCATCTGATGAGCCACTTCAGGAGCCACTGGAGGC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAACCCCCAGCTCAATGTaGCGGCGAGCAATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGTPSSM*RRAMKG
Trigger: GCCCTTCATTGCTCGCCGTCACATTGAGCTGGGGGT...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTCTTTTCTCCACAGGTaGCAGGAGGGGATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELSFLHR*QEGIGS
Trigger: AGACCCAATCCCCTCCTGTCACCTGTGGAGAAAAGA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGCAGGGGACACAGGATTaGTGCCTGTCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQQGTQD*CLSCRP
Trigger: CGGACGGCATGACAGGCAGCAATCCTGTGTCCCCTG...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCGACGCAGCTTGGCCTaGTCCTCCCTCCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNRRSLA*SSLRAR
Trigger: ACGGGCCCGGAGGGAGGAGCAGGCCAAGCTGCGTCG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGCTGCAGCGGATAACATaGTCGTACTTTTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWLQRIT*SYFLGI
Trigger: GATGCCCAAAAAGTACGAGCATGTTATCCGCTGCAG...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAATGAGGCGCTGTGGTaGAGGAGTCGGAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGNEALW*RSRSWH
Trigger: GTGCCAGCTCCGACTCCTGCACCACAGCGCCTCATT...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTGAGGGCAGGCGAGCCTaGATATCGGGAGATAGAATG +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFEGRRA*ISGDRM
Trigger: CATTCTATCTCCCGATATGCAGGCTCGCCTGCCCTC...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACGGGAGCGGCACCAGATaGCGAAACCACAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYGSGTR*RNHKGR
Trigger: TCTTCCCTTGTGGTTTCGGCATCTGGTGCCGCTCCC...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGCTTTGGCCTTTTTACTaGGCCGGTGGGTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRRELWPFY*AGGCLH
Trigger: GTGGAGGCACCCACCGGCGCAGTAAAAAGGCCAAAG...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACTGGGCACACAGCTCTaGCTCAGGCCTCAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGLGTQL*LRPQAQ
Trigger: TTGGGCTTGAGGCCTGAGGCAGAGCTGTGTGCCCAG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGGGCATGCTGGGAGCTaGCCTCATTCTGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVGHAGS*PHSGPP
Trigger: CGGTGGCCCAGAATGAGGCCAGCTCCCAGCATGCCC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGGGGCGAGGGGGCTCTaGCACCTTAGGCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVGARGL*HLRQPL
Trigger: AAGAGGCTGCCTAAGGTGCCAGAGCCCCCTCGCCCC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACGAGCAGCTCTTCCAGTaGCAATTCTCCCTCACGGCG +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYEQLFQ*QFSLTA
Trigger: CGCCGTGAGGGAGAATTGCCACTGGAAGAGCTGCTC...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCATGACGCTCATGAAATaGCCTGTGGCTAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFMTLMK*PVASVS
Trigger: GGAGACACTAGCCACAGGCCATTTCATGAGCGTCAT...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCTGGAGGAGGTCGAACTaGGACAGGGCCCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SGKRLLSTCRAIPLLSTSWRRSN*DRAQGR
Trigger: GCGCCCCTGGGCCCTGTCCCAGTTCGACCTCCTCCA...GGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAACTGTTGGGCTGCAGTaGAGGCAAGAGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGTVGLQ*RQEDRA
Trigger: GGCCCTGTCCTCTTGCCTCCACTGCAGCCCAACAGT...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGGGACAAGGTTGGCGTaGGAGGCCGTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVGTRLA*EAVRSH
Trigger: GTGGGACCTCACGGCCTCCCACGCCAACCTTGTCCC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGATGGGCTCAGGCGAACTaGGGCAGGTGGTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGWAQAN*GRWCWL
Trigger: AAGCCAACACCACCTGCCCCAGTTCGCCTGAGCCCA...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTGCCTGGAGGTGGGGCTaGGCTCAGGCGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSAWRWG*AQANWG
Trigger: GCCCCAGTTCGCCTGAGCCCAGCCCCACCTCCAGGC...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGGAAGGTGTAGCCTaGTGGCACTGTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYREGVA*WHCQGL
Trigger: AAGCCCCTGACAGTGCCACCAGGCTACACCTTCCCT...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTGGGTGCTGGGGCCAATaGAGGAACAGGAGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGGCWGQ*RNRSQS
Trigger: GGACTGACTCCTGTTCCTCCATTGGCCCCAGCACCC...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAGAGGCCTCACCAGAGTaGGTGTGGGCATGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQREASPE*VWAWGL
Trigger: GAGCCCCCATGCCCACACCCACTCTGGTGAGGCCTC...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGCCCAGGGAGGGAGGATaGCACGTGGAGAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQPREGG*HVERRR
Trigger: TCTTCTCCTCTCCACGTGCCATCCTCCCTCCCTGGG...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGAGATGCAGAAGATGCTaGAGCCAGAAGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELRCRRC*SQKGSL
Trigger: CAGGCTTCCCTTCTGGCTCCAGCATCTTCTGCATCT...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAAAGCTGGGGACTGTGTaGAGGCTGGGGCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRKLGTV*RLGPAP
Trigger: TGGCGCTGGCCCCAGCCTCCACACAGTCCCCAGCTT...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGGGCTGGCAACAGGTTaGGGCAGGGTACAGAAATCC +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRREGLATG*GRVQKS
Trigger: GGATTTCTGTACCCTGCCCCAACCTGTTGCCAGCCC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACTGGTCTAGTCGCTGCTaGGGAAACAGTACAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYWSSRC*GNSTAR
Trigger: CCGGGCTGTACTGTTTCCCCAGCAGCGACTAGACCA...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGCAGCCTTGGCCTGGGTaGCTGCACGGATATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRREQPWPG*LHGYPL
Trigger: AAGAGGATATCCGTGCAGCCACCCAGGCCAAGGCTG...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACTGCAGCGGGGTGGTGTaGTGGTGCTGCGAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYCSGVV*WCCEFD
Trigger: ATCAAACTCGCAGCACCACCACACCACCCCGCTGCA...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGGCCCCTCTTCCGTTTaGGTGGGGACGTTGAAATGG +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRREGPSSV*VGTLKW
Trigger: CCATTTCAACGTCCCCACCCAAACGGAAGAGGGGCC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGTTCCAACGGCGCTCCTaGGCAAAGTCAGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQFQRRS*AKSAES
Trigger: GCTCTCTGCTGACTTTGCTCAGGAGCGCCGTTGGAA...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGATGCTCCAGAACTGCCTaGCATCCTTGGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGCSRTA*HPWPWW
Trigger: CCACCATGGCCAAGGATGTCAGGCAGTTCTGGAGCA...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACGCCGGGACTGTTGCTTaGATTGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYAGTVA*IAPPSP
Trigger: TGGAGAAGGTGGTGCAATTCAAGCAACAGTCCCGGC...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAAGGACTGGAGGCAGCTaGGGAAGAGCCGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRRTGGS*GRAEAR
Trigger: CCTTGCCTCGGCTCTTCCTCAGCTGCCTCCAGTCCT...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCCTGCTACTATCCTCCTaGGGAGGCTCTTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSLLLSS*GGSSAS
Trigger: GGAAGCGGAAGAGCCTCCTCAGGAGGATAGTAGCAG...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAACAGTCAAGGGGGCTaGGATGGGGATGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGNSQGG*DGDGEW
Trigger: CCACTCACCATCCCCATCTCAGCCCCCTTGACTGTT...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGATGCTGGGGCCACGGTTaGGTTCAACCCTGGAACATG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGCWGHG*VQPWNM
Trigger: CATGTTCCAGGGTTGAACTCAACCGTGGCCCCAGCA...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGGGGTGGCTAGAGCCTaGGATGCAGAAGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGGVARA*DAEDAG
Trigger: TCCAGCATCTTCTGCATCTCAGGCTCTAGCCACCCC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCTCAGACTCCTCTACTaGACCCTCAGGCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVLRLLY*TLRPQG
Trigger: CCCCTGGGGCCTGAGGGTTCAGTAGAGGAGTCTGAG...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGAGCAGGGGAGGGGCTaGTCTGCATGGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCEQGRG*SAWSHS
Trigger: GGAGTGGGACCATGCAGAGCAGCCCCTCCCCTGCTC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCGGGGAGATGCCGCCTaGCCCACTAGAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNRGDAA*PTRGWG
Trigger: TCCCCAGCCTCTAGTGGGGCAGGCGGCATCTCCCCG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGCTGCTCCTCGTGGTaGCGGATCACCATGCGCACC +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCRCSSW*RITMRT
Trigger: GGTGCGCATGGTGATCCGGCACCACGAGGAGCAGCG...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCGCCAGTGAGGCTAACTaGCCGATGCTGACCACTTCG +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSASEAN*PMLTTS
Trigger: CGAAGTGGTCAGCATCGGGCAGTTAGCCTCACTGGC...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACTCAAGGTCAGTGTCTaGACTGAAGCTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGLKVSV*TEAGAR
Trigger: CCTGGCCCCAGCTTCAGTGCAGACACTGACCTTGAG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAACTCAAGGTCAGTGTCTaGACTGAAGCTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLPTSQDQPSGWSGKNQLKVSV*TEAGAR
Trigger: CCTGGCCCCAGCTTCAGTGCAGACACTGACCTTGAG...TTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCGCCAAGGTCTGAGCTaGGGCCGGGCCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSRQGLS*GRAQGR
Trigger: CCTACCCTGGGCCCGGCCGCAGCTCAGACCTTGGCG...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTTGCTCCTGGAAGGCTaGCTGACGTGGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVLLLEG*LTWGQP
Trigger: TGGCTGGCCCCACGTCAGGCAGCCTTCCAGGAGCAA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACACTCGGTGGCCCTCTaGCTTGAGCTGCCGCAACAG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRHSVAL*LELPQQ
Trigger: CTGTTGCGGCAGCTCAAGGCAGAGGGCCACCGAGTG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCTCTGGAGATGCCAATaGCTGGGCACACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGLWRCQ*LGTQLC
Trigger: GCAGAGCTGTGTGCCCAGGCATTGGCATCTCCAGAG...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGGAGTTGCCATCCCCTaGAGAGGAAATGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGGVAIP*RGNGPR
Trigger: CCTGGGACCATTTCCTCTGCAGGGGATGGCAACTCC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGCTGCTGCGCAGGATaGGCTGGTCCCCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCRCCAG*AGPLGW
Trigger: CCAACCAAGGGGACCAGCGCATCCTGCGCAGCAGCG...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTCCATGACAACCAGTTaGCTACCCCCTACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELSMTTS*LPPTLV
Trigger: CACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGGGCTTCCTCTGCTATaGTGCCTCCCTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVGLPLL*CLPATS
Trigger: GGAGGTGGCAGGGAGGCAGCATAGCAGAGGAAGCCC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCAATTCGACGCAGCTTaGCCTGCTCCTCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVQFDAA*PAPPSG
Trigger: CCCGGAGGGAGGAGCAGGCCAAGCTGCGTCGAATTG...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAGAGCAGCTCTTCCAGTaGCAATTCTCCCTCACGGCG +
Preference number: 4 (lower is better)
Translates to: SLLPTSQDQPSGWSGKNQEQLFQ*QFSLTA
Trigger: CGCCGTGAGGGAGAATTGCCACTGGAAGAGCTGCTC...TTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCGGGTTTGAGAGGGGCTaGAAGGCCCTTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSGFERG*KALPTA
Trigger: AGCTGTTGGAAGGGCCTTCCAGCCCCTCTCAAACCC...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGCAGAAGCAGGGGAATaGGCGTCTTTACCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGAEAGE*ASLPGS
Trigger: CGACCCAGGTAAAGACGCCCATTCCCCTGCTTCTGC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGTCAGCTTGTTGCCCTaGATTTGGAAGGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELVSLLP*IWKVRG
Trigger: ACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGAC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTGGCCAGGGGTTAACGTaGGGCGTGGATTCAACACAG +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGGQGLT*GVDSTQ
Trigger: CTGTGTTGAATCCACGCCCCACGTTAACCCCTGGCC...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGAGTGGGTGTGGGCATaGGGGCTCGAGCAGTACCCA +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVEWVWA*GLEQYP
Trigger: TGGGTACTGCTCGAGCCCCCATGCCCACACCCACTC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGGGGATGGTGAGTaGAGCCGAGGCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIDGDGE*SRGWGR
Trigger: CCTGCCCCAGCCTCGGCTCCACTCACCATCCCCATC...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATGGTGGAGTCACACTaGTCAACAGAGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSMVESH*STELGP
Trigger: CGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCAT...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGACAACAGGTGCCAATaGTGGAGTCACACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELDNRCQ*WSHTGQ
Trigger: TTGACCAGTGTGACTCCACCATTGGCACCTGTTGTC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACAGACAGGAGCAGCACCTaGCGATGGTGCCAGGACCGG +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITDRSST*RWCQDR
Trigger: CCGGTCCTGGCACCATCGCCAGGTGCTGCTCCTGTC...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTATGAGCCTCCAAGAGTaGGTGCTAAAGCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFMSLQE*VLKLGL
Trigger: TAGCCCCAGCTTTAGCACCCACTCTTGGAGGCTCAT...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGAGACAGCGTCTGAGTTaGACCCAGTGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQRQRLS*TQWWSW
Trigger: CCAGGACCACCACTGGGTCCAACTCAGACGCTGTCT...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATGGGGCTGGGCCCACTaGAGAAGCTGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITWGWAH*RSWSQR
Trigger: CCTCTGGCTCCAGCTTCTCCAGTGGGCCCAGCCCCA...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAAGATGAGCACTCGGTaGCCCTCTGCCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGKMSTR*PSALSC
Trigger: GCAGCTCAAGGCAGAGGGCCACCGAGTGCTCATCTT...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGGAACACCTCCTCCTTaGCTTGGTCCAGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRREGTPPP*LGPGLC
Trigger: GCAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGTTTCCACATCAGCACTaGTGCGACGCCGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQFPHQH*CDAEEV
Trigger: GACCTCCTCGGCGTCGCACCAGTGCTGATGTGGAAA...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGTCCTCCACAGAGTCTaGCTGACTGCTACTATCCTC +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRREVLHRV*LTATIL
Trigger: GAGGATAGTAGCAGTCAGTCAGACTCTGTGGAGGAC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGCGCCTCATCCAGAATaGGATAGCGCCAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQAPHPE*DSASSC
Trigger: GCAAGAACTGGCGCTATCTCATTCTGGATGAGGCGC...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGCTAACTGCCCGATGCTaGCCACTTCGCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQLTARC*PLRLRA
Trigger: TGCCCTCAGGCGAAGTGGTCAGCATCGGGCAGTTAG...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACCTGGATTTGGAAGGTaGGAGGTTTGCTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGPGFGR*EVCFPL
Trigger: CAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACCCCAAAGAGAGTGTCTaGGATGGAGATGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYPKESV*DGDEPP
Trigger: TGGAGGCTCATCTCCATCTCAGACACTCTCTTTGGG...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAGGCAGAGGGCACGGATaGGCTAGAAGGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRGRGHG*ARRFLQ
Trigger: CTGGAGGAACCTTCTAGCTCATCCGTGCCCTCTGCC...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGTGGTGCTGCGAGTTTaGTGGGCGGATATGACAGGA +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGVVLRV*WADMTG
Trigger: TCCTGTCATATCCGCCCATCAAACTCGCAGCACCAC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCACAAGGAGGAATCTGTaGAGGAGGGGGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGTRRNL*RRGRRR
Trigger: CCTTCTCCTCCCCCTCCTTCACAGATTCCTCCTTGT...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGGGGAGATTAGTGACTaGGGCAGAGATGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGGEISD*GRDGHR
Trigger: TCTGTGCCCATCTCTGCCTCAGTCACTAATCTCCCC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATACTGGCTGGGCCGAGGTaGTGGAGGATTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIILAGPR*WRILGR
Trigger: CCTCCCAAGAATCCTCCATCACCTCGGCCCAGCCAG...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGGGAAGGGGTGTGGCTaGCTCAAACCAGTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGGKGCG*LKPVWL
Trigger: TAGCCAAACTGGTTTGAGTCAGCCACACCCCTTCCC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGACCACCTTGGCTCCCTaGACCCAAGTAACGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRRETTLAP*TQVTKD
Trigger: ATCCTTCGTTACTTGGGTTCAGGGAGCCAAGGTGGT...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGACGCCTCTGGGCCTCTaGATCATTGCCTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQTPLGL*IIAFLL
Trigger: CAACAGGAAGGCAATGATGCAGAGGCCCAGAGGCGT...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTACGCCTCTGGGCCTCTaGATCATTGCCTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGTPLGL*IIAFLL
Trigger: CAACAGGAAGGCAATGATGCAGAGGCCCAGAGGCGT...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGGAGGCCCACTGCCTaGATCTGCCTCACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVRRPTA*ICLTLL
Trigger: GAGCAGAGTGAGGCAGATGCAGGCAGTGGGCCTCCT...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTGAACCACTGTTGGGCTaGAGTGGAGGCAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGEPLLG*SGGKRT
Trigger: TGTCCTCTTGCCTCCACTGCAGCCCAACAGTGGTTC...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGAATGAGGCGCTGTGGTaGAGGAGTCGGAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQNEALW*RSRSWH
Trigger: GTGCCAGCTCCGACTCCTGCACCACAGCGCCTCATT...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCTGATGAGATGGTGCTaGCCCCCTGCTGACACGAGG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVLMRWC*PPADTR
Trigger: CCTCGTGTCAGCAGGGGGGCAGCACCATCTCATCAG...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCCCTCTGCCTTGAGCTaGCGCAACAGCACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVPSALS*RNSTAN
Trigger: GTTGGCAGTGCTGTTGCGGCAGCTCAAGGCAGAGGG...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGTGCTGGCCGAGGGGCTaGCGTCCGGCTGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMCWPRG*RPAAGH
Trigger: ATGCCCTGCAGCCGGACGCCAGCCCCTCGGCCAGCA...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCACTGTGGCACCATCTaGGGGGCCTGGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCHCGTI*GAWRSI
Trigger: GATGGACCTCCAGGCCCCCCAGATGGTGCCACAGTG...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGCCAGGTCAGCAGCCTaGGATAAGCTGAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVARSAA*DKLNPS
Trigger: GGAGGGGTTCAGCTTATCCCAGGCTGCTGACCTGGC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTAGTCCCAGTGACCTTTaGGGCGAGGGGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCSPSDL*GEGALA
Trigger: TGCCAGAGCCCCCTCGCCCCAAAGGTCACTGGGACT...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGTCTGCTCTTCATCCCTaGCAAGCAAGTACTCCACCC +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRRESALHP*QASTPP
Trigger: GGGTGGAGTACTTGCTTGCCAGGGATGAAGAGCAGA...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGTCTTTACCTGGGTCGTaGCCAGCGTGTAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQSLPGS*PACNPW
Trigger: CCAAGGGTTACACGCTGGCCACGACCCAGGTAAAGA...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACGGGCAAGCAGAGAGATaGTCTGGATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYGQAER*SGWSSQ
Trigger: TTGGGAAGACCATCCAGACCATCTCTCTGCTTGCCC...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGACACATGAAAGGCATTaGGCTTGGTCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQTHERH*AWSSPA
Trigger: GGCAGGGCTGGACCAAGCCCAATGCCTTTCATGTGT...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTACACATGAAAGGCATTaGGCTTGGTCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGTHERH*AWSSPA
Trigger: GGCAGGGCTGGACCAAGCCCAATGCCTTTCATGTGT...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATATTGCGACGGAAGGCCTaGTGGTCCTGCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIILRRKA*WSCSTS
Trigger: GCTGGTGCTGCAGGACCACCAGGCCTTCCGTCGCAA...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGACCTTCATCTTGACTaGCTTGGGCCGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIDLHLD*LGPGWG
Trigger: CCCCCACCCCGGCCCAAGCCAGTCAAGATGAAGGTC...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGGAGAGAACCACTGTTaGGCTGCAGTGGAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGGENHC*AAVEAR
Trigger: TCTTGCCTCCACTGCAGCCCAACAGTGGTTCTCTCC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTGCAGGAGTCGGAGCTaGCACTGCTGTGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVCRSRS*HCCGGS
Trigger: GCTACCACCACAGCAGTGCCAGCTCCGACTCCTGCA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTGTCGGGGCCACGGCCTaGATGAGGGCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSVGATA*MRATWA
Trigger: TGCCCATGTGGCCCTCATCCAGGCCGTGGCCCCGAC...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGGGTGCTGGGGCCAATaGAGGAACAGGAGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVGCWGQ*RNRSQS
Trigger: GGACTGACTCCTGTTCCTCCATTGGCCCCAGCACCC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGGAGAGGAGAAGAGATaGTCAAGGGGGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVGEEKR*SRGQLR
Trigger: CCGGAGCTGCCCCCTTGACCATCTCTTCTCCTCTCC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTGATGGGGATGGTGAGTaGAGCCGAGGCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSDGDGE*SRGWGR
Trigger: CCTGCCCCAGCCTCGGCTCCACTCACCATCCCCATC...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGACAGGAGCAGCACCTaGCGATGGTGCCAGGACCGG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNDRSST*RWCQDR
Trigger: CCGGTCCTGGCACCATCGCCAGGTGCTGCTCCTGTC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGAGAACGAGGGCCGATaGGGCTGGCAACAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCENEGR*GWQQVG
Trigger: CCCAACCTGTTGCCAGCCCCATCGGCCCTCGTTCTC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGTTGCCTCCCTCAATaGCCATGTCCCCCAACATTC +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYSCLPQ*PCPPTF
Trigger: GAATGTTGGGGGACATGGCCATTGAGGGAGGCAACT...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAAGCGGGGTGGTGTGGTaGTGCTGCGAGTTTGATGGG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRSGVVW*CCEFDG
Trigger: CCCATCAAACTCGCAGCACCACCACACCACCCCGCT...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGAGGAGGTTTCTGAACTaGCCACAGAAGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRRERRFLN*PQKPAP
Trigger: TGGAGCTGGCTTCTGTGGCCAGTTCAGAAACCTCCT...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGCTTTCGAAGCACTTTaGGGCCTGGTGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQAFEAL*GLVVVL
Trigger: CAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGC...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAAGGACTCCCACCAACTaGGGCCCCTGCTCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIRTPTN*GPCSFA
Trigger: CGCAAACGAGCAGGGGCCCCAGTTGGTGGGAGTCCT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCAGCCTGGGATAAGCTaGACCCCTCCAGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNQPGIS*TPPGAL
Trigger: CAGTGCCCCTGGAGGGGTTCAGCTTATCCCAGGCTG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCTCAGCTCCATGGCATaGTCCACCTCCCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVLSSMA*STSPSN
Trigger: GTTGGAAGGGGAGGTGGATCATGCCATGGAGCTGAG...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGATCTGCTTGGCTCTGTaGTTGGGCATCCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQICLAL*LGILRL
Trigger: GAGTCTGAGGATGCCCAATCACAGAGCCAAGCAGAT...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTATCTGCTTGGCTCTGTaGTTGGGCATCCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGICLAL*LGILRL
Trigger: GAGTCTGAGGATGCCCAATCACAGAGCCAAGCAGAT...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACGCTGGTGGGAACAATaGTTAAATGGGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGRWWEQ*LNGDPS
Trigger: ACTGGGGTCCCCATTTAATCATTGTTCCCACCAGCG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTTTGTGGTCTGTGCCATaGAGTCATCATAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFLWSVP*SHHRDS
Trigger: GCTGTCTCTATGATGACTTCATGGCACAGACCACAA...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp TCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGCACTGACTTCAGGTaGAGGACTGTGGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLLPTSQDQPSGWSGKNQSTDFR*RTVDQL
Trigger: AAGCTGGTCCACAGTCCTTCACCTGAAGTCAGTGCT...TTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp TCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAACAACCCTGGAACATGTaGAGAGGTGGGAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: SLLPTSQDQPSGWSGKNQQPWNM*RGGSQQ
Trigger: TTGTTGGCTCCCACCTCTTCACATGTTCCAGGGTTG...TTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGTGCTGGGGCCACGGTTaGGTTCAACCCTGGAACATG +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQCWGHG*VQPWNM
Trigger: CATGTTCCAGGGTTGAACTCAACCGTGGCCCCAGCA...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCCCCAAAGAGAGTGTCTaGGATGGAGATGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSPKESV*DGDEPP
Trigger: TGGAGGCTCATCTCCATCTCAGACACTCTCTTTGGG...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGCCAGAGACAGCGTCTaGGTTGGACCCAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCARDSV*VGPSGG
Trigger: ACCACCACTGGGTCCAACTCAGACGCTGTCTCTGGC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCACGAAGACGCTCACTaGCACGAGTCCCCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNHEDAH*HESPAS
Trigger: AGAGGCCGGGGACTCGTGTCAGTGAGCGTCTTCGTG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGGAAAAGGATATCTGTaGCTTCAAACTGACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELGKGYL*LQTDWG
Trigger: TCCCCAGTCAGTTTGAAGTCACAGATATCCTTTTCC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTGTTATCACCAGTACTaGTGGCCGAGGGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVCYHQY*WPRGWR
Trigger: ACGCCAGCCCCTCGGCCAGCAGTACTGGTGATAACA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGACTGTTGCTTGAATTaGACCACCTTCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELDCCLN*TTFSTL
Trigger: CAATGTGGAGAAGGTGGTGCAATTCAAGCAACAGTC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCAGTCTAGCCCAATGTaGTGGTACTCCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVQSSPM*WYSRSW
Trigger: CCAGCTCCGGGAGTACCAGCACATTGGGCTAGACTG...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCCTTAGTTGTGGTCTGTaGCATGAAGTCATCATAGAG +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFLSCGL*HEVIIE
Trigger: CTCTATGATGACTTCATGGCACAGACCACAACTAAG...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCGGCGAGAGAGGCGGTaGCGGGGCAGAAATGTGTCT +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNRRERR*RGRNVS
Trigger: AGACACATTTCTGCCCCGGCACCGCCTCTCTCGCCG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCCTGATGAGATGGTGCTaGCCCCCTGCTGACACGAGG +
Preference number: 4 (lower is better)
Translates to: SGKRLLSTCRAIPLLSTSLMRWC*PPADTR
Trigger: CCTCGTGTCAGCAGGGGGGCAGCACCATCTCATCAG...GGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGGGGTGGTGTGGTGGTaGTGCGAGTTTGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNGVVWW*CEFDGR
Trigger: CCGCCCATCAAACTCGCAGCACCACCACACCACCCC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTGGGAGGGAGGGGCGCTaGTGCGCAGGATGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCGREGR*CAGCAG
Trigger: ACCAGCGCATCCTGCGCAGCAGCGCCCCTCCCTCCC...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACTGAGTTTCGGCTCCTaGCTCAGCTTTGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGLSFGS*LSFGLA
Trigger: AGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCAGGCTATTATCTACTTaGAGAGCAATCCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFRLLST*RAIPLL
Trigger: GAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCT...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATTATCACCAGTACTGCTaGCCGAGGGGCTGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNYHQYC*PRGWRP
Trigger: CGGACGCCAGCCCCTCGGCCAGCAGTACTGGTGATA...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTCATGCTCGTACTTTTTaGGCATCTGCTTCTCAACAT +
Preference number: 4 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPHARTF*ASASQH
Trigger: ATGTTGAGAAGCAGATGCCCAAAAAGTACGAGCATG...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAATCCGCTGGAGGGGATaGACATCCGTGGCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIIRWRG*TSVALS
Trigger: GCTAAGGGCCACGGATGTCCATCCCCTCCAGCGGAT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACCCATGTCTATCCGCTaGAGGGGATGGACATCCGTG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRPMSIR*RGWTSV
Trigger: CACGGATGTCCATCCCCTCCAGCGGATAGACATGGG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTTCACCAGAGTGGGTGTaGGCATGGGGGCTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSSPEWV*AWGLEQ
Trigger: CTGCTCGAGCCCCCATGCCCACACCCACTCTGGTGA...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATAGCAGCACCTGGCGATaGTGCCAGGACCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNSSTWR*CQDRKR
Trigger: CCTCTTCCGGTCCTGGCACCATCGCCAGGTGCTGCT...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGAAGGCTGCCTGACGTaGGGCCAGCCAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYEGCLT*GQPRRW
Trigger: CCACCTCCTTGGCTGGCCCCACGTCAGGCAGCCTTC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTAAGCACTTTGGGGCCTaGTGGTTGTCCTGGCCGACC +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCKHFGA*WLSWPT
Trigger: GGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTT...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCAGGCACTAGGGTGCTaGCAGCTCCCCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMQALGC*QLPAAA
Trigger: GGCAGCAGCGGGGAGCTGCCAGCACCCTAGTGCCTG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGCTGGGTCAGCCCCATTaGTTTTTCCCTTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQLGQPH*FFPSRW
Trigger: CCACCTTGAAGGGAAAAACCAATGGGGCTGACCCAG...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGTGACAGGAGGGGATTaGGTCTGTGAACTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVVTGGD*VCELAG
Trigger: CCCAGCCAGTTCACAGACCCAATCCCCTCCTGTCAC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGGTCCCCTTGGTTGGTaGTCCCAACAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYGPLGW*SQQAGG
Trigger: CCCGCCGGCTTGTTGGGACCACCAACCAAGGGGACC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACCACTGCCCAGCCACGTaGGGTGAAGGGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYHCPAT*GEGEGD
Trigger: GTCCCCTTCCCCTTCACCCCACGTGGCTGGGCAGTG...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAGGGATTGGGGAATGCTaGCTAACAGGTGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: SLLPTSQDQPSGWSGKNQGIGEC*LTGAAF
Trigger: AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCC...TTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAACGGTGCCGCCGTACTaGAGGGAATCACACCAGAAG +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIITVPPY*RESHQK
Trigger: CTTCTGGTGTGATTCCCTTCAGTACGGCGGCACCGT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCTCCCCCTTGGATGCCTaGAGAATGACTGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGSPLDA*RMTGLL
Trigger: TAACAACCCAGTCATTCTTCAGGCATCCAAGGGGGA...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCTGCGTTTGTCTGCATTaGACCGTTCCATCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGCVCLH*TVPSRP
Trigger: AGGCCTTGATGGAACGGTTCAATGCAGACAAACGCA...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTCCGAGTTGAAAGGATaGAGCAGAATATGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELSELKG*SRICVC
Trigger: ACAAACGCATATTCTGCTTCATCCTTTCAACTCGGA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGCCTTGCGGCCTCTGTaGCTAACAGCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMALRPL*LTAGPA
Trigger: GGCTGGCCCTGCTGTTAGTCACAGAGGCCGCAAGGC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAACCAGTTTGGCTAGATaGAGAGCAGGGGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIITSLAR*RAGEGP
Trigger: TGGGCCCTCCCCTGCTCTTCATCTAGCCAAACTGGT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCTCAAGCCGGGACTGTTaGTTGAATTGCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGSSRDC*LNCTTF
Trigger: GAAGGTGGTGCAATTCAAGCAACAGTCCCGGCTTGA...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCCAGAGTCTGACTGACTaGTACTATCCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSQSLTD*YYPPEE
Trigger: CTCCTCAGGAGGATAGTAGCAGTCAGTCAGACTCTG...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGATAGCGCCAGTTCTTaGGACGGAAGGCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCDSASS*DGRPGG
Trigger: ACCACCAGGCCTTCCGTCGCAAGAACTGGCGCTATC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCTACTTTTTGGGCATCTaGTTCTCAACATCCACCTTA +
Preference number: 4 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFYFLGI*FSTSTL
Trigger: TAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTA...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGGGCAGAAATGTGTCTaGCTCATATCGAGAGACACG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGGQKCV*LISRDT
Trigger: CGTGTCTCTCGATATGAGGCAGACACATTTCTGCCC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCGGGCAGAAATGTGTCTaGCTCATATCGAGAGACACG +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSGQKCV*LISRDT
Trigger: CGTGTCTCTCGATATGAGGCAGACACATTTCTGCCC...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACGCTGGGACAACAGGTaGCAATGGTGGAGTCACACT +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRRWDNR*QWWSHT
Trigger: AGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCCACATCAGCACTGGTaGGACGCCGAGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMPHQHW*DAEEVG
Trigger: CCCGACCTCCTCGGCGTCGCACCAGTGCTGATGTGG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATATCCTCGCATTCCTTCTaGTTCAAGCCGAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIISSHSF*FKPKAG
Trigger: GCCCGCCTTCGGCTTGAAGCAGAAGGAATGCGAGGA...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGGGCCCCTGCTCGTTTaGGAGGCAACTTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCGPLLV*EATSQS
Trigger: AGACTGAGAAGTTGCCTCGCAAACGAGCAGGGGCCC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACAGGACCCTAGGTACTaGAACCCGTTTCAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGQDPRY*NPFQAK
Trigger: CTTTGCTTGAAACGGGTTGCAGTACCTAGGGTCCTG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTGGCCTCAAAACCTTGTaGAGGCGTTTGACTAGACCT +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGGLKTL*RRLTRP
Trigger: AGGTCTAGTCAAACGCCTCCACAAGGTTTTGAGGCC...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACTGGCTTGGGCCGGGGTaGGGGGTCAGGAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYWLGPG*GVRSSS
Trigger: GCTACTGCTCCTGACCCCCCACCCCGGCCCAAGCCA...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTTTGTTGCCCTGGATTTaGAAGGTGAGAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFLLPWI*KVRGLL
Trigger: AAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAA...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATGGATGAGGGCCACATaGGCAGGCTGGCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITWMRAT*AGWLMR
Trigger: TCTCATCAGCCAGCCTGCCCATGTGGCCCTCATCCA...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCAACAGGTGCCAATGGTaGAGTCACACTGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGNRCQW*SHTGQQ
Trigger: CTGTTGACCAGTGTGACTCCACCATTGGCACCTGTT...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCGACAACAGGTGCCAATaGTGGAGTCACACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSDNRCQ*WSHTGQ
Trigger: TTGACCAGTGTGACTCCACCATTGGCACCTGTTGTC...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCGAACATGTGAAGAGGTaGGAGCCAACAACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSEHVKR*EPTTEG
Trigger: ACCCTCTGTTGTTGGCTCCCACCTCTTCACATGTTC...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGTTGGAAAGGGTCCCTaGGGGTTCCCCGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIVGKGP*GFPVPK
Trigger: TTTGGGAACGGGGAACCCCCAGGGACCCTTTCCAAC...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCATGATTTCTGACAGCTaGTCTAGTCGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGMISDS*SSRCWG
Trigger: TCCCCAGCAGCGACTAGACCAGCTGTCAGAAATCAT...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTTTTTTACTGCGCCGGTaGGTGCCTCCACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCFLLRR*VPPPVP
Trigger: TGGGACTGGTGGAGGCACCCACCGGCGCAGTAAAAA...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCGGTGTATGAGCTGGTaGAGGGGTACAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNRCMSW*RGTGRR
Trigger: CCTCCTGCCTGTACCCCTCCACCAGCTCATACACCG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGAGTTACCAGCCGTCCTaGCAGCTTTCGAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQSYQPS*QLSKHF
Trigger: AAAGTGCTTCGAAAGCTGCCAGGACGGCTGGTAACT...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTTGGGGTCCAAGAGGCTaGGGCCCAGGAATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCWGPRG*GPGISC
Trigger: ACAGCTTATTCCTGGGCCCCAGCCTCTTGGACCCCA...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTCTCTCCCCTTGGCCCTaGGGTTGCCGTCGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGLSPWP*GCRRLP
Trigger: GGGGAGGCGACGGCAACCCCAGGGCCAAGGGGAGAG...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGCCTACCCCCTACTTTaGTGGGAAGAAGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVAYPLL*WEEGRR
Trigger: CCTTCTCCCTTCTTCCCACCAAAGTAGGGGGTAGGC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCGACCAACCTAGCGGCTaGTCAGGTAAAAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSDQPSG*SGKNQR
Trigger: CCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTC...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATAGACCACACCCCCTGTaGAAGTCTGCACTTCCACGG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNRPHPL*KSALPR
Trigger: CCGTGGAAGTGCAGACTTTCACAGGGGGTGTGGTCT...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACTCTGGAGCACCTGTGTaGGCTGAGACCACACCCCCT +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYSGAPV*AETTPP
Trigger: AGGGGGTGTGGTCTCAGCTCACACAGGTGCTCCAGA...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCTGGATGCCTGAAGAATaGCTGGGTTGTTATCACCAG +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGWMPEE*LGCYHQ
Trigger: CTGGTGATAACAACCCAGTCATTCTTCAGGCATCCA...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTCCAGCTTGTAAGATGTaGTACACACATGAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFPACKM*YTHERH
Trigger: ATGCCTTTCATGTGTGTATCACATCTTACAAGCTGG...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCTTGTGGTCTGTGCCATaGAGTCATCATAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGLWSVP*SHHRDS
Trigger: GCTGTCTCTATGATGACTTCATGGCACAGACCACAA...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGAGGGGTGGGCTGGGCTaGGAGCTCAGGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQRGGLG*ELRTWR
Trigger: CCTCCAGGTCCTGAGCTCTCAGCCCAGCCCACCCCT...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATATCGGGAGATAGAATaGGGCGCTGTGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITYREIE*GAVVQE
Trigger: CTCCTGCACCACAGCGCCTCATTCTATCTCCCGATA...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACCTAACTGCCCGATGCTaGCCACTTCGCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYLTARC*PLRLRA
Trigger: TGCCCTCAGGCGAAGTGGTCAGCATCGGGCAGTTAG...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCGGGGGCTGAAGCACTaGCTTCAGGTGAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNRGLKH*LQVKDC
Trigger: ACAGTCCTTCACCTGAAGTCAGTGCTTCAGCCCCCG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTCGGGGGCTGAAGCACTaGCTTCAGGTGAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSRGLKH*LQVKDC
Trigger: ACAGTCCTTCACCTGAAGTCAGTGCTTCAGCCCCCG...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCACCAGGTGTCTGAGATaGAGACAGGGATGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVTRCLR*RQGWSC
Trigger: ACAGCTCCATCCCTGTCTTCATCTCAGACACCTGGT...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTAGCTGGATTTGGTGCTaGCGGAAAAGGACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCSWIWC*RKRTGQ
Trigger: CTGGCCAGTCCTTTTCCGTCAGCACCAAATCCAGCT...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGGTGCCAGGGCCCCATaGGCCTCACTAAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNGARAP*ASLSWK
Trigger: TTTCCAACTTAGTGAGGCTCATGGGGCCCTGGCACC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGCCTGCTCCAGAATATaGGTCTGCTTGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCACSRI*VCLLAT
Trigger: TGTGGCCAGCAAGCAGACTCATATTCTGGAGCAGGC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTTTGATGGGCGGATATaGCAGGAGTGTGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVFDGRI*QECGLP
Trigger: GGGCAAACCACACTCCTGTCATATCCGCCCATCAAA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAATGCTTGGCCTGTTCTaGAATTTCGGCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGMLGLF*NFGMAL
Trigger: AAGAGCCATGCCGAAATTGCAGAACAGGCCAAGCAT...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGCATCTGCCTCACTCTaGTCTTCATCCCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCASASL*SSSLAS
Trigger: GCTTGCCAGGGATGAAGAGCAGAGTGAGGCAGATGC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCGCATCTGCCTCACTCTaGTCTTCATCCCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SGKRLLSTCRAIPLLSTSASASL*SSSLAS
Trigger: GCTTGCCAGGGATGAAGAGCAGAGTGAGGCAGATGC...GGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGAGGTTTGCTTCCCCCTaGATTAGCCACTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQRFASP*ISHWTL
Trigger: CAACGTCCAGTGGCTAATGCAGGGGGAAGCAAACCT...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACACGCTGGGACAACAGGTaGCAATGGTGGAGTCACACT +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITRWDNR*QWWSHT
Trigger: AGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCG...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACAGTCCCATACACAGGTaGCAGGGCCCCATGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYSPIHR*QGPMSL
Trigger: GAGGCTCATGGGGCCCTGGCACCTGTGTATGGGACT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGTGGTGTGGTGGTGCTaGGAGTTTGATGGGCGGATA +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCVVWWC*EFDGRI
Trigger: TATCCGCCCATCAAACTCGCAGCACCACCACACCAC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGACCATTGGGGATGCTaGCAGCCTCCAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYDHWGC*QPPRSG
Trigger: GCCTGACCTTGGAGGCTGGCAGCATCCCCAATGGTC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCATCCTTGGCCATGGTaGAAGCAATTCGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVHPWPW*KQFDAA
Trigger: AGCTGCGTCGAATTGCTTCCACCATGGCCAAGGATG...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTCAATCTCACGCCTCTaGGCCTCTGCATCATTGCCT +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVSISRL*ASASLP
Trigger: AGGCAATGATGCAGAGGCCCAGAGGCGTGAGATTGA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTGCAGAAGCAGGGGAATaGGCGTCTTTACCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSAEAGE*ASLPGS
Trigger: CGACCCAGGTAAAGACGCCCATTCCCCTGCTTCTGC...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGAGGAGCAGGCGTCTCTaGCTGTTGAAGTTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQRSRRL*LLKLRS
Trigger: ACTCCTCAACTTCAACAGCCAGAGACGCCTGCTCCT...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTACTTAAGCTGAACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: LLKLNCEFNSSTTQTWAYCPTAS*RTWAPV
Trigger: GACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCA...ATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTGCCACATGGGCAGGCTaGCTGATGAGATGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSATWAG*LMRWCC
Trigger: GCAGCACCATCTCATCAGCCAGCCTGCCCATGTGGC...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAATGGTTGGTGGCACCTaGTTAGCAGCAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIMVGGT*LAASGR
Trigger: CCTTCCGCTTGCTGCTAACCAGGTGCCACCAACCAT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATTATTCACCATGGTTaGTGGCACCTGGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSIIHHG*WHLVSS
Trigger: GCTGCTAACCAGGTGCCACCAACCATGGTGAATAAT...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTTGGATTCAACACAGCTaGAAGCCCAGAGCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCWIQHS*KPRARR
Trigger: CCTCCGAGCTCTGGGCTTCCAGCTGTGTTGAATCCA...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGGCCAGGGGTTAACGTaGGGCGTGGATTCAACACAG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNGQGLT*GVDSTQ
Trigger: CTGTGTTGAATCCACGCCCCACGTTAACCCCTGGCC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCCCAGGGAGGGAGGATaGCACGTGGAGAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSPREGG*HVERRR
Trigger: TCTTCTCCTCTCCACGTGCCATCCTCCCTCCCTGGG...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGAGATGCAGAAGATGCTaGAGCCAGAAGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQRCRRC*SQKGSL
Trigger: CAGGCTTCCCTTCTGGCTCCAGCATCTTCTGCATCT...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAATGAGCCTCCAAGAGTaGGTGCTAAAGCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRMSLQE*VLKLGL
Trigger: TAGCCCCAGCTTTAGCACCCACTCTTGGAGGCTCAT...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTACCCAGTGGTGGTCCTaGTGCCAAAGACAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCTQWWS*CQRQCL
Trigger: CAGACACTGTCTTTGGCACCAGGACCACCACTGGGT...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCACCCAGTGGTGGTCCTaGTGCCAAAGACAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SGKRLLSTCRAIPLLSTSTQWWS*CQRQCL
Trigger: CAGACACTGTCTTTGGCACCAGGACCACCACTGGGT...GGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTAGTTGGACCCAGTGGTaGTCCTGGTGCCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCSWTQW*SWCQRQ
Trigger: CTGTCTTTGGCACCAGGACCACCACTGGGTCCAACT...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACCTCCAGGAATTTCATaGCATAGCGCTCAATGGGGG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRPPGIS*HSAQWG
Trigger: CCCCCATTGAGCGCTATGCCATGAAATTCCTGGAGG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGGAGATGCCAATGCCTaGGCACACAGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNGDANA*AHSSAS
Trigger: TGAGGCAGAGCTGTGTGCCCAGGCATTGGCATCTCC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGTGGCTTCTCTGGGCTaGAGGTTGGGGTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYVASLG*RLGSWP
Trigger: AGGCCAAGACCCCAACCTCCAGCCCAGAGAAGCCAC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGTGGAAAGCCTAGGTaGAGGGGCAGCCCACTCACG +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMGGKPR*RGSPLT
Trigger: CGTGAGTGGGCTGCCCCTCCACCTAGGCTTTCCACC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACAAGAGCCCAGGGAGCTaGGAAGGGGTGTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYKSPGS*EGVWLT
Trigger: AGTCAGCCACACCCCTTCCCAGCTCCCTGGGCTCTT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACAGCACCTGTGTGAGCTaGGACCACACCCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYSTCVS*DHTPCE
Trigger: TTCACAGGGGGTGTGGTCTCAGCTCACACAGGTGCT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATTCCAGTGAGGAATCTTaGGCTATGTGCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNSSEES*AMCCGE
Trigger: CTCCCCGCAGCACATAGCTCAAGATTCCTCACTGGA...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGGCTGGTTGAGGCTCTaGGACAGAAGGTCCGAGTAC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYGWLRL*DRRSEY
Trigger: GTACTCGGACCTTCTGTCTCAGAGCCTCAACCAGCC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCCGCTGGTGGGAACAATaGTTAAATGGGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: SGKRLLSTCRAIPLLSTSRWWEQ*LNGDPS
Trigger: ACTGGGGTCCCCATTTAATCATTGTTCCCACCAGCG...GGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACCTTGTGGAGGCGTTTaGCTAGACCTTCATTATACT +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGPCGGV*LDLHYT
Trigger: AGTATAATGAAGGTCTAGTCAAACGCCTCCACAAGG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTCCTGGATTTGGAAGGTaGGAGGTTTGCTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSPGFGR*EVCFPL
Trigger: CAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGG...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAAGCACTGACTTCAGGTaGAGGACTGTGGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIISTDFR*RTVDQL
Trigger: AAGCTGGTCCACAGTCCTTCACCTGAAGTCAGTGCT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACAACCAGGTGTCTGAGATaGAGACAGGGATGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITTRCLR*RQGWSC
Trigger: ACAGCTCCATCCCTGTCTTCATCTCAGACACCTGGT...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCGCCAGAGACAGCGTCTaGGTTGGACCCAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCARDSV*VGPSGG
Trigger: ACCACCACTGGGTCCAACTCAGACGCTGTCTCTGGC...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGCCGGGATACCATGGTaGCAGGCAAGGGAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGAGIPW*QARERH
Trigger: GTGCCGCTCCCTTGCCTGTCACCATGGTATCCCGGC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTCCTGGAAGGCTGCCTaGCGTGGGGCCAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGSWKAA*RGASQG
Trigger: TCCTTGGCTGGCCCCACGTCAGGCAGCCTTCCAGGA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCAGCGGTCCTGGGCCTaGGCATCCATGGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCQRSWA*ASMVGF
Trigger: GAATCCCACCATGGATGCTCAGGCCCAGGACCGCTG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGTGCCTCCTGCTCTTaGCCATTGGGGATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMGASCS*PLGMLP
Trigger: TGGCAGCATCCCCAATGGTCAAGAGCAGGAGGCACC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGGCCGACCAGTCCCTTaGCCCCTAATTTCCACATCA +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNGRPVP*PLISTS
Trigger: TGATGTGGAAATTAGGGGTCAAGGGACTGGTCGGCC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTGGAGGATTCTGGCCCTaGCATGCTGCGGACAGACGG +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCGGFWP*HAADRR
Trigger: CCGTCTGTCCGCAGCATGTCAGGGCCAGAATCCTCC...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACTCCCTTCAAGGTGGATaGGGGTGCCTCATCCACACC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYSLQGG*GCLIHT
Trigger: GGTGTGGATGAGGCACCCTCATCCACCTTGAAGGGA...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGATTGCTGCCTGTCATaGCGTCCGACACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNDCCLS*RPTPSV
Trigger: CACAGATGGTGTCGGACGGCATGACAGGCAGCAATC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGGCTCCTGCATACTGCTaGAATAGCTCCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQAPAYC*NSSSME
Trigger: TTCCATGGAGGAGCTATTGCAGCAGTATGCAGGAGC...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACAGAGTCTGACTGACTaGTACTATCCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRQSLTD*YYPPEE
Trigger: CTCCTCAGGAGGATAGTAGCAGTCAGTCAGACTCTG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAAGTTCTTGATGTTCTaGGCCTCATCCAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYKFLMF*ASSRMR
Trigger: TCTCATTCTGGATGAGGCGCAGAACATCAAGAACTT...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTACTTAAGCTGAACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATCGGCGAGAGAGGCGGTaGCGGGGCAGAAATGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLKLNCEFNSSTTQTWAYRRERR*RGRNVS
Trigger: AGACACATTTCTGCCCCGGCACCGCCTCTCTCGCCG...ATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATATGTGGTGGTAGCAGTTaGCGTGGTGGTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIICGGSS*RGGRSG
Trigger: ACCACTTCTACCACCACGGCAACTGCTACCACCACA...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACAAGAAGGAGCCAGAATTaGTGTCTGTGGAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITRRSQN*CLWSRH
Trigger: ATGGCGGCTCCACAGACAGCAATTCTGGCTCCTTCT...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACCAGTGGTGGTCCTGGTaGCAAAGACAGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYQWWSW*QRQCLG
Trigger: GCCCAGACACTGTCTTTGGCACCAGGACCACCACTG...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATAGCTGGTCTAGTCGCTaGTGGGGAAACAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNSWSSR*WGNSTA
Trigger: GGCTGTACTGTTTCCCCAGCAGCGACTAGACCAGCT...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCTGCCGCAACAGCACTaGCAACGTCTGCAACTTTCC +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNLPQQH*QRLQLS
Trigger: GGAAAGTTGCAGACGTTGGCAGTGCTGTTGCGGCAG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACATTCTGGCCCTGACATaGTGCGGACAGACGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYILALT*CGQTGF
Trigger: GAAGCCCGTCTGTCCGCAGCATGTCAGGGCCAGAAT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCACCTCTCCCAGCATCTaGTGGAGACCTGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVTSPSI*WRPVLL
Trigger: AAGAAGAACAGGTCTCCAGCAGATGCTGGGAGAGGT...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATATCCGACTTTCGGAGTTaGCATCCCCTGCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIISDFRS*HPLQRK
Trigger: TTTCCTCTGCAGGGGATGGCAACTCCGAAAGTCGGA...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATATCTCGAGAACAGAAGTaGTGTCACGGTCCAAGACGG +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIISREQK*CHGPRR
Trigger: CCGTCTTGGACCGTGACAGCACTTCTGTTCTCGAGA...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTCCTTGGCCCTGGGGTTaGCGTCGCCTCCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGPWPWG*RRLPNP
Trigger: TGGATTGGGGAGGCGACGGCAACCCCAGGGCCAAGG...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTTCTCGGCCTCATGCTTaGCCTGTTCTGCAATTTCGG +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCSRPHA*PVLQFR
Trigger: CCGAAATTGCAGAACAGGCCAAGCATGAGGCCGAGA...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATGTGACAGCAGAGGGTaGGGGCTTTATCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITCDSRG*GLYLQH
Trigger: GTGTTGGAGATAAAGCCCCCACCCTCTGCTGTCACA...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGCTTGGCTCTGTGATTaGGCATCCTCAGACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVAWLCD*ASSDSS
Trigger: TGAAGAGTCTGAGGATGCCCAATCACAGAGCCAAGC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTGGTACTCCCGGAGCTaGCCCCGCAGAAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNWYSRS*PRRSRG
Trigger: TCCCCTGCTTCTGCGGGGCCAGCTCCGGGAGTACCA...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCTCTAGCCCAATGTGCTaGTACTCCCGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCSSPMC*YSRSWP
Trigger: GGGCCAGCTCCGGGAGTACCAGCACATTGGGCTAGA...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGAGGGTCGAACAGATTTaGATGATTGCAAACTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELRVEQI*MIANFS
Trigger: AGAAAAGTTTGCAATCATCCAAATCTGTTCGACCCT...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCATCCGCTGGAGGGGATaGACATCCGTGGCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCIRWRG*TSVALS
Trigger: GCTAAGGGCCACGGATGTCCATCCCCTCCAGCGGAT...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAAGACCTTCATCTTGACTaGCTTGGGCCGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQDLHLD*LGPGWG
Trigger: CCCCCACCCCGGCCCAAGCCAGTCAAGATGAAGGTC...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMASWRT*APVKVS
Trigger: GCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGCPTAS*RTWAPV
Trigger: GACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGGAGTGGGTGTGGGCATaGGGGCTCGAGCAGTACCCA +
Preference number: 4 (lower is better)
Translates to: KETATGNHKRDREEFLLLEWVWA*GLEQYP
Trigger: TGGGTACTGCTCGAGCCCCCATGCCCACACCCACTC...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATGAGGCCTCACCAGAGTaGGTGTGGGCATGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNEASPE*VWAWGL
Trigger: GAGCCCCCATGCCCACACCCACTCTGGTGAGGCCTC...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGAACAGGTGCCAATGGTaGAGTCACACTGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQNRCQW*SHTGQQ
Trigger: CTGTTGACCAGTGTGACTCCACCATTGGCACCTGTT...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTGACGGAAAAGGACTaGCCAGAGCCGAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSLTEKD*PEPKLA
Trigger: TGCCAGCTTCGGCTCTGGCCAGTCCTTTTCCGTCAG...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCAGAATTGCTGTCTGTaGAGCCGCCATAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNQNCCL*SRHRSQ
Trigger: CTGGCTCCTATGGCGGCTCCACAGACAGCAATTCTG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCACGTGTGAGCTGGGGCTaGGCCCACTGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQMSLKYLVHNIKLCNSPRVSWG*AHWRSW
Trigger: CCAGCTTCTCCAGTGGGCCCAGCCCCAGCTCACACG...TGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAAAGCTGGGGACTGTGTaGAGGCTGGGGCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: VQMSLKYLVHNIKLCNSPKLGTV*RLGPAP
Trigger: TGGCGCTGGCCCCAGCCTCCACACAGTCCCCAGCTT...TGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCCTGAGCATCCATGGTaGGATTCCAGTCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCPEHPW*DSSRCH
Trigger: ATGACAGCGACTGGAATCCCACCATGGATGCTCAGG...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTTCGAGGCCTAGGTGCTaGCCTGGGAACTCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCSRPRC*PGNSLP
Trigger: AGGGAGCGAGTTCCCAGGCCAGCACCTAGGCCTCGA...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGATATGGACAGGGAGAATaGTTATTGGATTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGYGQGE*LLDLGL
Trigger: CAGCCCCAAATCCAATAACCATTCTCCCTGTCCATA...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATATGTAACGAGTTCCTGTaGCTTCTCTGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIICNEFL*LLWAGG
Trigger: ACCTCCAGCCCAGAGAAGCCACAGGAACTCGTTACA...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACACGTTTCACAGCAGGTaGGGTGATGGCGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYTFHSR*GDGEQC
Trigger: GCACTGCTCGCCATCACCCCACCTGCTGTGAAACGT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGAGCCCACTCACGTCTTaGCCTTGCGGCCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMSPLTS*PCGLCD
Trigger: GTCACAGAGGCCGCAAGGCCAAGACGTGAGTGGGCT...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTCAAGTACAAGGGGGTaGGGACAGAGACTATCTTGC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVSSTRG*GQRLSC
Trigger: GCAAGATAGTCTCTGTCCCCACCCCCTTGTACTTGA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGGTCCTCTAGGCCCTaGCATCAAACCACCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVRSSRP*HQTTFL
Trigger: TAGAAAGGTGGTTTGATGCCAGGGCCTAGAGGACCT...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATACAGTTTGCCCCACAATaGAGTCCAAATGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIQFAPQ*SPNAGP
Trigger: TGGACCTGCATTTGGACTTCATTGTGGGGCAAACTG...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCTGCTACTATCCTCCTaGGGAGGCTCTTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMLLLSS*GGSSAS
Trigger: GGAAGCGGAAGAGCCTCCTCAGGAGGATAGTAGCAG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACTCGAACAGATTTGGATaGTTGCAAACTTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYSNRFG*LQTFLS
Trigger: GCTGAGAAAAGTTTGCAATCATCCAAATCTGTTCGA...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACTATCGGGAGATAGAATaGGGCGCTGTGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYYREIE*GAVVQE
Trigger: CTCCTGCACCACAGCGCCTCATTCTATCTCCCGATA...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGGTTAATGACAATGTCTaGGTTGGAAAGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQVNDNV*VGKGPW
Trigger: CCAGGGACCCTTTCCAACTCAGACATTGTCATTAAC...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTCTCATCAGATGCTGCTaGGGGTGGGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGLIRCC*GWELQA
Trigger: GGCCTGGAGCTCCCACCCTCAGCAGCATCTGATGAG...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTCACAGCAGGTGGGGTaGTGGCGAGCAGTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGSQQVG*WRAVLR
Trigger: ACGGAGCACTGCTCGCCATCACCCCACCTGCTGTGA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGAGGGGATTGGGTCTGTaGACTGGCTGGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMRGLGL*TGWGPR
Trigger: TCTTGGACCCCAGCCAGTTCACAGACCCAATCCCCT...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACTACACTGAGTCTAAATaGCCTCATTACCACACAGAA +
Preference number: 4 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYYTESK*PHYHTE
Trigger: TTCTGTGTGGTAATGAGGTCATTTAGACTCAGTGTA...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGTCATCTTCATCTGGATaGCAAGGCTGTTTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQSSSSG*QGCLLR
Trigger: GCGCAACAAACAGCCTTGGCATCCAGATGAAGATGA...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGCAACTGTTCCTCAGCTaGTATAGTATCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQQLFLS*YSILFI
Trigger: GATGAAGAGGATACTATAGCAGCTGAGGAACAGTTG...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAACAACTGTTCCTCAGCTaGTATAGTATCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SLLPTSQDQPSGWSGKNQQLFLS*YSILFI
Trigger: GATGAAGAGGATACTATAGCAGCTGAGGAACAGTTG...TTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGAGACTTTCAGCTGCTaGAGCAATGTCAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGETFSC*SNVSNF
Trigger: GAAATTACTGACATTGCTGCAGCAGCTGAAAGTCTC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTGAGACTTTCAGCTGCTaGAGCAATGTCAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGETFSC*SNVSNF
Trigger: GAAATTACTGACATTGCTGCAGCAGCTGAAAGTCTC...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCAGTCTAGCCCAATGTaGTGGTACTCCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCQSSPM*WYSRSW
Trigger: CCAGCTCCGGGAGTACCAGCACATTGGGCTAGACTG...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCAAGTTCTTGATGTTCTaGGCCTCATCCAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSKFLMF*ASSRMR
Trigger: TCTCATTCTGGATGAGGCGCAGAACATCAAGAACTT...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGCTTAGTTGTGGTCTGTaGCATGAAGTCATCATAGAG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQLSCGL*HEVIIE
Trigger: CTCTATGATGACTTCATGGCACAGACCACAACTAAG...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTACTGTCCGGCCTTCTTaGTTAGGTACTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSTVRPS*LGTGCS
Trigger: GCTGCAGCCAGTACCTAAGCAAGAAGGCCGGACAGT...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGAGGGCAGGCGAGCCTaGATATCGGGAGATAGAATG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYEGRRA*ISGDRM
Trigger: CATTCTATCTCCCGATATGCAGGCTCGCCTGCCCTC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGCCAGTGAGGCTAACTaGCCGATGCTGACCACTTCG +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMASEAN*PMLTTS
Trigger: CGAAGTGGTCAGCATCGGGCAGTTAGCCTCACTGGC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCAGTGGTGGTCCTGGTaGCAAAGACAGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCQWWSW*QRQCLG
Trigger: GCCCAGACACTGTCTTTGGCACCAGGACCACCACTG...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGCACTGCCAACGTCTaGAACTTTCCGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVSTANV*NFPQSY
Trigger: GTATGATTGCGGAAAGTTGCAGACGTTGGCAGTGCT...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGAATATGCGTTTGTCTaGATTGAACCGTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: PISMTTSCLPPTLVGRREEYAFV*IEPFHQ
Trigger: TTGATGGAACGGTTCAATGCAGACAAACGCATATTC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGATTCTGCCCGACACAATaGCTGCTCCAGAATATGAGT +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRFCPTQ*LLQNMS
Trigger: ACTCATATTCTGGAGCAGGCATTGTGTCGGGCAGAA...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACCTTGGCCTGGGTGGCTaGACGGATATCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYLGLGG*TDILFI
Trigger: GATGAAGAGGATATCCGTGCAGCCACCCAGGCCAAG...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGTTCTCATTAAATTCTaGAAGCTCAGCCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGVLIKF*KLSHLF
Trigger: GAACAGGTGGCTGAGCTTGCAGAATTTAATGAGAAC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGACCAACTGGGGCCCCTaGTCGTTTGCGAGGCAACTT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMTNWGP*SFARQL
Trigger: AAGTTGCCTCGCAAACGAGCAGGGGCCCCAGTTGGT...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAGCAAAGAATGATGTGTaGCAAGAAGCTGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRAKNDV*QEAAGK
Trigger: CTTCCCTGCAGCTTCTTGGCACACATCATTCTTTGC...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGGTTTGAGAGGGGCTaGAAGGCCCTTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMGFERG*KALPTA
Trigger: AGCTGTTGGAAGGGCCTTCCAGCCCCTCTCAAACCC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATTGTGACAGCAGAGGGTaGGGGCTTTATCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNCDSRG*GLYLQH
Trigger: GTGTTGGAGATAAAGCCCCCACCCTCTGCTGTCACA...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTTCTTTACCTGGGTCGTaGCCAGCGTGTAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSSLPGS*PACNPW
Trigger: CCAAGGGTTACACGCTGGCCACGACCCAGGTAAAGA...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTGGAACAATGATTAAATaGGGACCCCAGTTACCTTTC +
Preference number: 4 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGGTMIK*GPQLPF
Trigger: GAAAGGTAACTGGGGTCCCCATTTAATCATTGTTCC...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAATGACGCTCATGAAATaGCCTGTGGCTAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIMTLMK*PVASVS
Trigger: GGAGACACTAGCCACAGGCCATTTCATGAGCGTCAT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTGGAGAGAACCACTGTTaGGCTGCAGTGGAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSGENHC*AAVEAR
Trigger: TCTTGCCTCCACTGCAGCCCAACAGTGGTTCTCTCC...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGTGGGCTCAGGCGAACTaGGGCAGGTGGTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KETATGNHKRDREEFLLLWAQAN*GRWCWL
Trigger: AAGCCAACACCACCTGCCCCAGTTCGCCTGAGCCCA...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGTGCAGGAGTCGGAGCTaGCACTGCTGTGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: KETATGNHKRDREEFLLLCRSRS*HCCGGS
Trigger: GCTACCACCACAGCAGTGCCAGCTCCGACTCCTGCA...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTTGGATTCAACACAGCTaGAAGCCCAGAGCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSWIQHS*KPRARR
Trigger: CCTCCGAGCTCTGGGCTTCCAGCTGTGTTGAATCCA...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACGGAGAGGAGAAGAGATaGTCAAGGGGGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYGEEKR*SRGQLR
Trigger: CCGGAGCTGCCCCCTTGACCATCTCTTCTCCTCTCC...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATACAGGGATGGAGCTGTaGCCAAACCTAGAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNTGMEL*PNLESR
Trigger: CCTTGACTCTAGGTTTGGCCACAGCTCCATCCCTGT...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGAACATGTGAAGAGGTaGGAGCCAACAACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIEHVKR*EPTTEG
Trigger: ACCCTCTGTTGTTGGCTCCCACCTCTTCACATGTTC...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACTTAAGTCAGGGAACTaGGTGCGCATGTTACACACA +
Preference number: 4 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRLKSGN*VRMLHT
Trigger: TGTGTGTAACATGCGCACCCAGTTCCCTGACTTAAG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGTTTCCGCAATCATACTaGATGAGTCTTAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQFPQSY*MSLKSG
Trigger: CCCTGACTTAAGACTCATCCAGTATGATTGCGGAAA...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATTTGGGGCTGAAATaGGTACTGGGGCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIDLGLK*VLGQKL
Trigger: CAGTTTCTGCCCCAGTACCCATTTCAGCCCCAAATC...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGTGGAGGTTGGGGTCTTaGCCTCTGTCAGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMWRLGS*PLSALP
Trigger: CGGAAGAGCTGACAGAGGCCAAGACCCCAACCTCCA...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGCCTGGTGGTTGTCCTaGCCGACCAGTCCCTTGACC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGAWWLS*PTSPLT
Trigger: GGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TTACTTAAGCTGAACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATGACTGTGGACCAGCTTaGGAAGAGGCCTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LLKLNCEFNSSTTQTWAYDCGPA*EEASPE
Trigger: CTCTGGTGAGGCCTCTTCTCAAGCTGGTCCACAGTC...ATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGGGGGTGGCTAGAGCCTaGGATGCAGAAGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: KETATGNHKRDREEFLLLGVARA*DAEDAG
Trigger: TCCAGCATCTTCTGCATCTCAGGCTCTAGCCACCCC...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATTCTGTGACTTCAAACTaGCTGGGGAAAGGCACCCTA +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNSVTSN*LGKGTL
Trigger: TAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGA...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTAAGCAGCAGCTCTaGTTACAGTGGGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSTKQQL*LQWGKA
Trigger: GGCTTTTCCCCACTGTAATCAGAGCTGCTGCTTAGT...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGTCTGCACTTCCACGGTaGCGCCGTACTGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMSALPR*RRTEGN
Trigger: ATTCCCTTCAGTACGGCGGCACCGTGGAAGTGCAGA...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTCCTCTTTCTGCCGCTaGTCCTCGTGGTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGSSFCR*SSWCRI
Trigger: GATCCGGCACCACGAGGAGCAGCGGCAGAAAGAGGA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGAGTACTTTTCAGTTTaGCCCACAATGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQEYFSV*PTMKSK
Trigger: TTTGGACTTCATTGTGGGGCAAACTGAAAAGTACTC...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTAAGTTGAGGAGTGACTaGCAGCGCTGTGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSKLRSD*QRCDLK
Trigger: CTTCAAGTCACAGCGCTGGCAGTCACTCCTCAACTT...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATTGGGGCATCAAAAAGTaGATCAAGGACCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNWGIKK*IKDHSS
Trigger: GGAGCTGTGGTCCTTGATGCACTTTTTGATGCCCCA...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTTGGGGCATCAAAAAGTaGATCAAGGACCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSWGIKK*IKDHSS
Trigger: GGAGCTGTGGTCCTTGATGCACTTTTTGATGCCCCA...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCTACTTTTTGGGCATCTaGTTCTCAACATCCACCTTA +
Preference number: 4 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGYFLGI*FSTSTL
Trigger: TAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTA...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGACTGTCCGGCCTTCTTaGTTAGGTACTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMTVRPS*LGTGCS
Trigger: GCTGCAGCCAGTACCTAAGCAAGAAGGCCGGACAGT...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGGGGAGCGGCACCAGATaGCGAAACCACAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KETATGNHKRDREEFLLLGSGTR*RNHKGR
Trigger: TCTTCCCTTGTGGTTTCGGCATCTGGTGCCGCTCCC...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCTTGGTCCAGGTCTTTaGGGGCAGCTTCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMLGPGL*GQLPLA
Trigger: AGCAAGTGGAAGCTGCCCGCAAAGACCTGGACCAAG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCTCAGCAGAATCTGGTaGCTCCTGCTCTTGACCATT +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNLSRIW*LLLLTI
Trigger: AATGGTCAAGAGCAGGAGGCACCAGATTCTGCTGAG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGGTGATGGCGAGCAGTaGTCCGTCTCCATTCTCGGG +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGGDGEQ*SVSILG
Trigger: CCCGAGAATGGAGACGGAGCACTGCTCGCCATCACC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTAGTCAGGGCTTCCTCTaGTATGCTGCCTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCSQGFL*YAASLP
Trigger: TGGCAGGGAGGCAGCATAGCAGAGGAAGCCCTGACT...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGCAATAGCTCCTCCATaGAAAGCTCACCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNAIAPP*KAHLLE
Trigger: CTCGAGAAGGTGAGCTTTCCATGGAGGAGCTATTGC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTGCTTGGCTCTGTGATTaGGCATCCTCAGACTCTTCA +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSAWLCD*ASSDSS
Trigger: TGAAGAGTCTGAGGATGCCCAATCACAGAGCCAAGC...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCCAGCGTGTAACCCTTaGGCTGGAGACTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMPACNP*AGDFQL
Trigger: CAGCTGAAAGTCTCCAGCCCAAGGGTTACACGCTGG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACCCCATGTCTATCCGCTaGAGGGGATGGACATCCGTG +
Preference number: 4 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYPMSIR*RGWTSV
Trigger: CACGGATGTCCATCCCCTCCAGCGGATAGACATGGG...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTACTTAAGCTGAACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATGGGGATGGCAACACCTaGGGGAGAGAACCACTGTTG +
Preference number: 4 (lower is better)
Translates to: LLKLNCEFNSSTTQTWAYGDGNT*GREPLL
Trigger: CAACAGTGGTTCTCTCCCCCAGGTGTTGCCATCCCC...ATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAAAGGGAAGGTGTAGCCTaGTGGCACTGTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQREGVA*WHCQGL
Trigger: AAGCCCCTGACAGTGCCACCAGGCTACACCTTCCCT...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQASWRT*APVKVS
Trigger: GCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGC...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCGTTGGGAATTGGCATTaGAGAAGAGGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCVGNWH*RRGWPR
Trigger: CCTGGGCCAGCCTCTTCTCCAATGCCAATTCCCAAC...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACACTGGTCAACAGAGCTaGGCCCGAAGCAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYTGQQS*ARSRNS
Trigger: ACTGTTTCTGCTTCGGGCCCAGCTCTGTTGACCAGT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTGACGGAAAAGGACTaGCCAGAGCCGAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCLTEKD*PEPKLA
Trigger: TGCCAGCTTCGGCTCTGGCCAGTCCTTTTCCGTCAG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACTCCTGGAGTAGACGATaGAGCCATAACTGGAACCGG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYSWSRR*SHNWNR
Trigger: CCGGTTCCAGTTATGGCTCCATCGTCTACTCCAGGA...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCTGAGTTGGACCCAGTaGTGGTCCTGGTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMLSWTQ*WSWCQR
Trigger: TCTTTGGCACCAGGACCACCACTGGGTCCAACTCAG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACAGACAGCGTCTGAGTTaGACCCAGTGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYRQRLS*TQWWSW
Trigger: CCAGGACCACCACTGGGTCCAACTCAGACGCTGTCT...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACAGCATTCGGGTCATCTaGGTGAAGATGAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYSIRVI*VKMSTR
Trigger: CCGAGTGCTCATCTTCACCCAGATGACCCGAATGCT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTGGGCCTGAGCATCCATaGTGGGATTCCAGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCGPEHP*WDSSRC
Trigger: ACAGCGACTGGAATCCCACCATGGATGCTCAGGCCC...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTTGTTCAGCCTTGGCCTaGGTGGCTGCACGGATATCC +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCCSALA*VAARIS
Trigger: GGATATCCGTGCAGCCACCCAGGCCAAGGCTGAACA...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTGCCTCTCAGGGGCTTTaGCCTTTTTACTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCASQGL*PFYCAG
Trigger: ACCGGCGCAGTAAAAAGGCCAAAGCCCCTGAGAGGC...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGTTACAGCCACCACCATaGACCCTCCACTCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMLQPPP*TLHSSV
Trigger: GACGGAAGAGTGGAGGGTCCATGGTGGTGGCTGTAA...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTACTTAAGCTGAACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATAAAAGCCAGAGGGCGTaGAGGGACCCACTGGACCTT +
Preference number: 4 (lower is better)
Translates to: LLKLNCEFNSSTTQTWAYKSQRA*RDPLDL
Trigger: AAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTT...ATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR CAA 72 bp AGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTaGTCTCCCTACTTCTCAGGTCCTCTAGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RNLQNDALLNHF*SPYFSGPLGPG
Trigger: GCCAGGGCCTAGAGGACCTGAGAAGTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATCTCAGCTCCATGGCATaGTCCACCTCCCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNLSSMA*STSPSN
Trigger: GTTGGAAGGGGAGGTGGATCATGCCATGGAGCTGAG...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCGTCCTCCACAGAGTCTaGCTGACTGCTACTATCCTC +
Preference number: 4 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCVLHRV*LTATIL
Trigger: GAGGATAGTAGCAGTCAGTCAGACTCTGTGGAGGAC...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGGCGCCTCATCCAGAATaGGATAGCGCCAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KETATGNHKRDREEFLLLAPHPE*DSASSC
Trigger: GCAAGAACTGGCGCTATCTCATTCTGGATGAGGCGC...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAAAGCTGGATTTGGTGCTaGCGGAAAAGGACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQSWIWC*RKRTGQ
Trigger: CTGGCCAGTCCTTTTCCGTCAGCACCAAATCCAGCT...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATGATGGCCATGGTAGGTaGGAAACTGCTCCAATACAT +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNDGHGR*ETAPIH
Trigger: ATGTATTGGAGCAGTTTCTCACCTACCATGGCCATC...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGTGAAAGGAAGCACCTaGGCAAGAGGGATAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYVKGST*ARGIKG
Trigger: CCCTTTTATCCCTCTTGCTCAGGTGCTTCCTTTCAC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGGGACACAGGATTGCTaGCTGTCATGCCGTCCGACA +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGGTQDC*LSCRPT
Trigger: TGTCGGACGGCATGACAGGCAGCAATCCTGTGTCCC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATTCATCTTCATCTGGATaGCAAGGCTGTTTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNSSSSG*QGCLLR
Trigger: GCGCAACAAACAGCCTTGGCATCCAGATGAAGATGA...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGCTCCTGCATACTGCTaGAATAGCTCCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYAPAYC*NSSSME
Trigger: TTCCATGGAGGAGCTATTGCAGCAGTATGCAGGAGC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCCAAACTTTTCTCAGCTaGATCAAAATGTTGATGACG +
Preference number: 4 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSQTFLS*IKMLMT
Trigger: CGTCATCAACATTTTGATGCAGCTGAGAAAAGTTTG...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACTGCTTAGGTACTGGCTaGAGCATCCTGTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYCLGTG*SILLTF
Trigger: GAAGGTCAACAGGATGCTGCAGCCAGTACCTAAGCA...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTTGTGTGCCAAGAAGCTaGAGGGAAGTAGATACAAAG +
Preference number: 4 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCCVPRS*REVDTK
Trigger: CTTTGTATCTACTTCCCTGCAGCTTCTTGGCACACA...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTCTTCCTCTGCTATGCTaGCTCCCTGCCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGLPLLC*LPATSS
Trigger: AGAGGAGGTGGCAGGGAGGCAGCATAGCAGAGGAAG...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGTCTGCAATTTCGGCATaGCTCTTCTCCCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMSAISA*LFSHFG
Trigger: CCCGAAGTGGGAGAAGAGCCATGCCGAAATTGCAGA...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAACCAGCGTGTAACCCTTaGGCTGGAGACTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQPACNP*AGDFQL
Trigger: CAGCTGAAAGTCTCCAGCCCAAGGGTTACACGCTGG...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTGCTGAAGCAGATGCCTaGGGTGATGAAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCAEADA*GDERGG
Trigger: ACCTCCCCTTTCATCACCCCAGGCATCTGCTTCAGC...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAAGCTGAAGCAGATGCCTaGGGTGATGAAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQAEADA*GDERGG
Trigger: ACCTCCCCTTTCATCACCCCAGGCATCTGCTTCAGC...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGGGGATGGCAACACCTaGGGGAGAGAACCACTGTTG +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGGDGNT*GREPLL
Trigger: CAACAGTGGTTCTCTCCCCCAGGTGTTGCCATCCCC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTAGAGGAGTTGGGAATTaGCATTGGAGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSRGVGN*HWRRGW
Trigger: CCAGCCTCTTCTCCAATGCCAATTCCCAACTCCTCT...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTATGGTGGAGTCACACTaGTCAACAGAGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGMVESH*STELGP
Trigger: CGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCAT...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAACTGAGTTGGACCCAGTaGTGGTCCTGGTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQLSWTQ*WSWCQR
Trigger: TCTTTGGCACCAGGACCACCACTGGGTCCAACTCAG...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATATAAGCCTATATATGTaGACATCCCGGGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNISLYM*TSRVWP
Trigger: TGGCCAGACCCGGGATGTCCACATATATAGGCTTAT...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTTACTGGGGCAGAAACTaGGACAGGAACAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCYWGRN*DRNKGR
Trigger: CCTGCCCTTGTTCCTGTCCCAGTTTCTGCCCCAGTA...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCCTCAGGCGAGGAAGTaGCTGAAGATGAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCPQARK*LKMRWM
Trigger: CATCCACCTCATCTTCAGCCACTTCCTCGCCTGAGG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATTTTTTCCCTTCAAGGTaGATGAGGGTGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNFFPSR*MRVPHP
Trigger: TGGATGAGGCACCCTCATCCACCTTGAAGGGAAAAA...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGAGCTGGGAAGGGGTGTaGCTGACTCAAACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMSWEGV*LTQTSL
Trigger: CAAACTGGTTTGAGTCAGCCACACCCCTTCCCAGCT...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACAGCTTTGGTTTGGCTTaGGTGGTGATGGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYSFGLA*VVMELT
Trigger: AGTCAGCTCCATCACCACCCAAGCCAAACCAAAGCT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCGTGGAGGGACCCACTaGACCTTCCTTCTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: KETATGNHKRDREEFLLLRGGTH*TFLLLS
Trigger: ACTAAGGAGAAGGAAGGTCCAGTGGGTCCCTCCACG...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATATGTTTCTTCCTCCTCTaGATGTTCATCTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIICFFLL*MFIFLI
Trigger: GATGAGGAAGATGAACATTCAGAGGAGGAAGAAACA...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTCCTTGAACTCGCGATaGGACTGGAAGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGSLNSR*DWKTWG
Trigger: GCCCCATGTCTTCCAGTCTCATCGCGAGTTCAAGGA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCATCCTTGAACTCGCGATaGGACTGGAAGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: VQMSLKYLVHNIKLCNSPSLNSR*DWKTWG
Trigger: GCCCCATGTCTTCCAGTCTCATCGCGAGTTCAAGGA...TGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCAACCCTGGAACATGTaGAGAGGTGGGAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCQPWNM*RGGSQQ
Trigger: TTGTTGGCTCCCACCTCTTCACATGTTCCAGGGTTG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACACCCCCACTCCGAGTTaGAAGGATGAAGCAGAATAT +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYTPTPS*KDEAEY
Trigger: ATATTCTGCTTCATCCTTTCAACTCGGAGTGGGGGT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGTAGAGAGCAAAGAATaGTGTGTGCCAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYVESKE*CVPRSC
Trigger: GCAGCTTCTTGGCACACATCATTCTTTGCTCTCTAC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGCAGCCATTTTACATaGAAACAGTTATGGGAATGG +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVSSHFT*KQLWEW
Trigger: CCATTCCCATAACTGTTTTCATGTAAAATGGCTGCT...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTAGGCTCCCCCTTGGATaGCTGAAGAATGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCRLPLG*LKNDWV
Trigger: AACCCAGTCATTCTTCAGGCATCCAAGGGGGAGCCT...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGAAGTTGAGGAGTGACTaGCAGCGCTGTGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMKLRSD*QRCDLK
Trigger: CTTCAAGTCACAGCGCTGGCAGTCACTCCTCAACTT...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGTGTGGTGGTAGCAGTTaGCGTGGTGGTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: KETATGNHKRDREEFLLLCGGSS*RGGRSG
Trigger: ACCACTTCTACCACCACGGCAACTGCTACCACCACA...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATCCTGCTGACACGAGGTaGACCACATTCCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNPADTR*TTFLCS
Trigger: GCTGCAAAGGAATGTGGTGCACCTCGTGTCAGCAGG...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGATCCTCTTCATCTTCTaGCCGACACAATGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMILFIF*PTQCLL
Trigger: GAGCAGGCATTGTGTCGGGCAGAAGATGAAGAGGAT...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTCGGGCAGCTTCCACTTaGTCTTCTGCCTGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGRAAST*SSACLS
Trigger: GCTCAAACAGGCAGAAGAGCAAGTGGAAGCTGCCCG...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAAAATTCCCAAGAGGCTaGCCCCTGAGTATTATAGAT +
Preference number: 4 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIKFPRG*PLSIID
Trigger: ATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTT...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTTCATCATCTTCATCTaGATGCCAAGGCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVFIIFI*MPRLFV
Trigger: AACAAACAGCCTTGGCATCCAGATGAAGATGATGAA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTTTCCACGGGCCCCTCTaGTTCACAGTCAGAGCTATT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCFHGPL*FTVRAI
Trigger: AATAGCTCTGACTGTGAACCAGAGGGGCCCGTGGAA...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACTCTGCTCTTCATCCCTaGCAAGCAAGTACTCCACCC +
Preference number: 4 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYSALHP*QASTPP
Trigger: GGGTGGAGTACTTGCTTGCCAGGGATGAAGAGCAGA...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTAGGAGCAGGCGTCTCTaGCTGTTGAAGTTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCRSRRL*LLKLRS
Trigger: ACTCCTCAACTTCAACAGCCAGAGACGCCTGCTCCT...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGCCTCAAAACCTTGTaGAGGCGTTTGACTAGACCT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMGLKTL*RRLTRP
Trigger: AGGTCTAGTCAAACGCCTCCACAAGGTTTTGAGGCC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGATGGTTGGTGGCACCTaGTTAGCAGCAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQMVGGT*LAASGR
Trigger: CCTTCCGCTTGCTGCTAACCAGGTGCCACCAACCAT...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACTCAGGTGAAGGACTGTaGACCAGCTTGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYSGEGL*TSLRRG
Trigger: GCCTCTTCTCAAGCTGGTCCACAGTCCTTCACCTGA...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAAACAGGGATGGAGCTGTaGCCAAACCTAGAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQTGMEL*PNLESR
Trigger: CCTTGACTCTAGGTTTGGCCACAGCTCCATCCCTGT...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCACAGAATTGCTGTCTGTaGAGCCGCCATAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VQMSLKYLVHNIKLCNSPQNCCL*SRHRSQ
Trigger: CTGGCTCCTATGGCGGCTCCACAGACAGCAATTCTG...TGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGTATGAGTCTGCTTGCTaGCCACAGTCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMYESAC*PQSLPP
Trigger: AGGAGGAAGAGACTGTGGCCAGCAAGCAGACTCATA...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTCCCCTGCAGAGGAAATaGTCCCAGGGATGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGPLQRK*SQGWAN
Trigger: ATTTGCCCATCCCTGGGACCATTTCCTCTGCAGGGG...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCTGCCTCAGCTTTaGTTTGGCTTGGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCLLPQL*FGLGGD
Trigger: ATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGCAAAGGTGGAGTCAATaGCACTGGTGGAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQQRWSQ*HWWKVG
Trigger: CCCCACCTTCCACCAGTGCCATTGACTCCACCTTTG...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTTGTTTCTTCCTCCTCTaGATGTTCATCTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSCFFLL*MFIFLI
Trigger: GATGAGGAAGATGAACATTCAGAGGAGGAAGAAACA...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATCGAACAGATTTGGATaGTTGCAAACTTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITSNRFG*LQTFLS
Trigger: GCTGAGAAAAGTTTGCAATCATCCAAATCTGTTCGA...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACCTCTGGAAAAAGTTGTaGAAGGAAGCACCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYLWKKL*KEAPEQ
Trigger: TTGCTCAGGTGCTTCCTTTCACAACTTTTTCCAGAG...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTACAACCCAGACAAAATaGAACCACCTTGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCTTQTK*NHLGSL
Trigger: CAGGGAGCCAAGGTGGTTTCATTTTGTCTGGGTTGT...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACCTGGAGACTTTCAGCTaGTGCAGCAATGTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYLETFS*CSNVSN
Trigger: ATTACTGACATTGCTGCAGCAGCTGAAAGTCTCCAG...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTACTTAAGCTGAACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATTGCTTAGGTACTGGCTaGAGCATCCTGTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: LLKLNCEFNSSTTQTWAYCLGTG*SILLTF
Trigger: GAAGGTCAACAGGATGCTGCAGCCAGTACCTAAGCA...ATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTAGGTTTGCTTCCCCCTaGATTAGCCACTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGRFASP*ISHWTL
Trigger: CAACGTCCAGTGGCTAATGCAGGGGGAAGCAAACCT...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGAAAAACAACAGTGTCTaGTCCTGTCAGGTTCACGCC +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMKNNSV*SCQVHA
Trigger: GGCGTGAACCTGACAGGAGCAGACACTGTTGTTTTT...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGAATATGAGTCTGCTTaGTGGCCACAGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMEYESA*WPQSLP
Trigger: AGGAAGAGACTGTGGCCAGCAAGCAGACTCATATTC...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGGAGGAGAAAAACGATaGCCAAGTTCCCACCCAACC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGGGEKR*PSSHPT
Trigger: GGTTGGGTGGGAACTTGGGCATCGTTTTTCTCCTCC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGTCAATCTCACGCCTCTaGGCCTCTGCATCATTGCCT +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQSISRL*ASASLP
Trigger: AGGCAATGATGCAGAGGCCCAGAGGCGTGAGATTGA...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACTCCTCTTCATCTGCTTaGCTCTGTGATTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYSSSSA*LCDWAS
Trigger: GGATGCCCAATCACAGAGCCAAGCAGATGAAGAGGA...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATGGGCAAGCAGAGAGATaGTCTGGATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNGQAER*SGWSSQ
Trigger: TTGGGAAGACCATCCAGACCATCTCTCTGCTTGCCC...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCATGCTCGTACTTTTTaGGCATCTGCTTCTCAACAT +
Preference number: 4 (lower is better)
Translates to: KDICDFKLTGERHPTTSNHARTF*ASASQH
Trigger: ATGTTGAGAAGCAGATGCCCAAAAAGTACGAGCATG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGAGGGTCGAACAGATTTaGATGATTGCAAACTTTTCT +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQRVEQI*MIANFS
Trigger: AGAAAAGTTTGCAATCATCCAAATCTGTTCGACCCT...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACGTCAGCTTGTTGCCCTaGATTTGGAAGGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYVSLLP*IWKVRG
Trigger: ACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGAC...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTAGAGGAGTTGGGAATTaGCATTGGAGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCRGVGN*HWRRGW
Trigger: CCAGCCTCTTCTCCAATGCCAATTCCCAACTCCTCT...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGTCCTGGAGTAGACGATaGAGCCATAACTGGAACCGG +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQSWSRR*SHNWNR
Trigger: CCGGTTCCAGTTATGGCTCCATCGTCTACTCCAGGA...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTGTCAGGCTCATCCTTaGAAACAGGCAGCCGGGATA +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGCQAHP*KQAAGI
Trigger: TATCCCGGCTGCCTGTTTCCAAGGATGAGCCTGACA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGCAGCCTGGTCAAGAGTaGGAGACCCCCATCTGTATT +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQQPGQE*ETPICI
Trigger: AATACAGATGGGGGTCTCCCACTCTTGACCAGGCTG...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTGGAGGTCCATCCAGTaGGGAATCTTGAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGWRSIQ*GILSYV
Trigger: CACATAGCTCAAGATTCCTCACTGGATGGACCTCCA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCTTGTGGAGGCGTTTaGCTAGACCTTCATTATACT +
Preference number: 4 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCPCGGV*LDLHYT
Trigger: AGTATAATGAAGGTCTAGTCAAACGCCTCCACAAGG...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTGTTAATGACAATGTCTaGGTTGGAAAGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCVNDNV*VGKGPW
Trigger: CCAGGGACCCTTTCCAACTCAGACATTGTCATTAAC...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTAGTCAGGGAACTGGGTaGGCATGTTACACACAATAC +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCSQGTG*ACYTQY
Trigger: GTATTGTGTGTAACATGCGCACCCAGTTCCCTGACT...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTTCCACTTGCTCTTCTaGCTGTTTGAGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGFHLLF*LFELLS
Trigger: CGAGAGGAGCTCAAACAGGCAGAAGAGCAAGTGGAA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACTCTTGGGTAGATTTCTaGCTGGAACATATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYSWVDF*LEHIVL
Trigger: CAGGACTATATGTTCCAGGCAGAAATCTACCCAAGA...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATGCAATAGCTCCTCCATaGAAAGCTCACCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNAIAPP*KAHLLE
Trigger: CTCGAGAAGGTGAGCTTTCCATGGAGGAGCTATTGC...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGGAACAATGATTAAATaGGGACCCCAGTTACCTTTC +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYGTMIK*GPQLPF
Trigger: GAAAGGTAACTGGGGTCCCCATTTAATCATTGTTCC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGATCTCCACAGCAACTaGCAACAGATCTTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGDLHSN*QQIFRG
Trigger: CCCCCTAAAGATCTGTTGCCAGTTGCTGTGGAGATC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTTGTGTGAAAGACAGCTaGGGAATCAAGTACAAGGGG +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCCVKDS*GIKYKG
Trigger: CCCCTTGTACTTGATTCCCCAGCTGTCTTTCACACA...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAACCAGCCAGTGTCACTCAAGTACTTaGTCCATAACATTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: GYYLLAEQSLYSLLPTSQCHSST*SITLSF
Trigger: AAAGCTTAATGTTATGGACCAAGTACTTGAGTGACA...CTGGCTGGTTGGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCCAGCTTGTAAGATGTaGTACACACATGAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMPACKM*YTHERH
Trigger: ATGCCTTTCATGTGTGTATCACATCTTACAAGCTGG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR TCA 90 bp GTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGCTGGTAGCATAGTTTaGGTTGATGATGGAGCCAAC +
Preference number: 4 (lower is better)
Translates to: VQMSLKYLVHNIKLCNSPAGSIV*VDDGAN
Trigger: GTTGGCTCCATCATCAACTCAAACTATGCTACCAGC...TGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGCTGCAGCGGATAACATaGTCGTACTTTTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQLQRIT*SYFLGI
Trigger: GATGCCCAAAAAGTACGAGCATGTTATCCGCTGCAG...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTTCTTGCTTAGGTACTaGCTGCAGCATCCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGFLLRY*LQHPVD
Trigger: GTCAACAGGATGCTGCAGCCAGTACCTAAGCAAGAA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGTTCTTGCTTAGGTACTaGCTGCAGCATCCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQFLLRY*LQHPVD
Trigger: GTCAACAGGATGCTGCAGCCAGTACCTAAGCAAGAA...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTTTGTTGCCCTGGATTTaGAAGGTGAGAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCLLPWI*KVRGLL
Trigger: AAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAA...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTATTATTCACCATGGTTaGTGGCACCTGGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGIIHHG*WHLVSS
Trigger: GCTGCTAACCAGGTGCCACCAACCATGGTGAATAAT...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGGGTAAAAACCAAAGGTaGAGTCAATGGCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQGKNQR*SQWHWW
Trigger: CCACCAGTGCCATTGACTCCACCTTTGGTTTTTACC...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTCGCAATCATACTGGATaGGTCTTAAGTCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGRNHTG*VLSQGT
Trigger: AGTTCCCTGACTTAAGACTCATCCAGTATGATTGCG...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATCTGGAGACTTTCAGCTaGTGCAGCAATGTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNLETFS*CSNVSN
Trigger: ATTACTGACATTGCTGCAGCAGCTGAAAGTCTCCAG...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACCAAACTTTTCTCAGCTaGATCAAAATGTTGATGACG +
Preference number: 4 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYQTFLS*IKMLMT
Trigger: CGTCATCAACATTTTGATGCAGCTGAGAAAAGTTTG...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTTGCCTGAAGAATGACTaGGTTGTTATCACCAGTACT +
Preference number: 4 (lower is better)
Translates to: PHYHTETCKMMPYLIISCCLKND*VVITST
Trigger: AGTACTGGTGATAACAACCCAGTCATTCTTCAGGCA...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
3UTR CAA 72 bp GAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTaGGTCCATAACATTAAGCTTTGTAATTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: EEKGLVQMSLKY*VHNIKLCNSPG
Trigger: ACCTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTCATTATACTCTTGGCTaGCCTCAATCATGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGHYTLG*PQSCQL
Trigger: TAACTGGCATGATTGAGGGCAGCCAAGAGTATAATG...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR GCA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGCATTATACTCTTGGCTaGCCTCAATCATGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQHYTLG*PQSCQL
Trigger: TAACTGGCATGATTGAGGGCAGCCAAGAGTATAATG...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATAAGAGTTCCTTTTACTaGCCATTTATTACCGTGCGG +
Preference number: 4 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNKSSFY*PFITVR
Trigger: CCGCACGGTAATAAATGGGCAGTAAAAGGAACTCTT...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
3UTR CAA 72 bp CAGCGTTTCTTTTTGGGGCCACGGAAAGGTTCTAAGTaGATTGTGTTGATGATTGTACAACCCTATAAATAT +
Preference number: 4 (lower is better)
Translates to: QRFFLGPRKGSK*IVLMIVQPYKY
Trigger: ATATTTATAGGGTTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAAACGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR GCA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTACCACACAGAAACCTaGAAAATGATGCCCTACTTA +
Preference number: 4 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGYHTET*KMMPYL
Trigger: TAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CCA 90 bp GTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCATTCATCATCTTCATCTaGATGCCAAGGCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: VQMSLKYLVHNIKLCNSPFIIFI*MPRLFV
Trigger: AACAAACAGCCTTGGCATCCAGATGAAGATGATGAA...TGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR TCA 90 bp GTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCACTGGTTTACTTAAGCTaGACTGTGAGTTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: VQMSLKYLVHNIKLCNSPLVYLS*TVSLTQ
Trigger: TTGAGTTAAACTCACAGTTCAGCTTAAGTAAACCAG...TGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS CCA 90 bp GGGCTGGCGTCCGGCTGCAGGGCATGCTGGGAGCTGGCCTCATTCTaGGCCACCGGCCACCGGGACCCGCCTTCCAGGGCCCGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: GLASGCRACWELASF*ATGHRDPPSRARGP
Trigger: TGGGCCCCGGGCCCTGGAAGGCGGGTCCCGGTGGCCGGTGGCCCAGAATGAGGCCAGCTCCCAGCATGCCCTGCAGCCGGACGCCAGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS CCA 90 bp TGCTGGCCGAGGGGCTGGCGTCCGGCTGCAGGGCATGCTGGGAGCTaGCCTCATTCTGGGCCACCGGCCACCGGGACCCGCCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: CWPRGWRPAAGHAGS*PHSGPPATGTRLPG
Trigger: CCCTGGAAGGCGGGTCCCGGTGGCCGGTGGCCCAGAATGAGGCCAGCTCCCAGCATGCCCTGCAGCCGGACGCCAGCCCCTCGGCCAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS CCA 90 bp CCAGTACTGCTGGCCGAGGGGCTGGCGTCCGGCTGCAGGGCATGCTaGGAGCTGGCCTCATTCTGGGCCACCGGCCACCGGGACCCGCCT +
Preference number: 5 (lower is better)
Translates to: PVLLAEGLASGCRAC*ELASFWATGHRDPP
Trigger: AGGCGGGTCCCGGTGGCCGGTGGCCCAGAATGAGGCCAGCTCCCAGCATGCCCTGCAGCCGGACGCCAGCCCCTCGGCCAGCAGTACTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS GCA 90 bp TCACCAGTACTGCTGGCCGAGGGGCTGGCGTCCGGCTGCAGGGCATaGTGGGAGCTGGCCTCATTCTGGGCCACCGGCCACCGGGACCCG +
Preference number: 5 (lower is better)
Translates to: SPVLLAEGLASGCRA*WELASFWATGHRDP
Trigger: CGGGTCCCGGTGGCCGGTGGCCCAGAATGAGGCCAGCTCCCAGCATGCCCTGCAGCCGGACGCCAGCCCCTCGGCCAGCAGTACTGGTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS GCA 90 bp GGTGGGTGGGAAAAAGGGCAGACGCTACTCCCAGCGAACCGCCGCTaGCGCTCCCGAGGCCTCACCAAAATGGCCGCCGCCGTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GGWEKGQTLLPANRR*RSRGLTKMAAAVSA
Trigger: GGCCGAGACGGCGGCGGCCATTTTGGTGAGGCCTCGGGAGCGGCAGCGGCGGTTCGCTGGGAGTAGCGTCTGCCCTTTTTCCCACCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS GCA 90 bp AGCTTGGCCTGCTCCTCCCTCCGGGCCCGTTCCTCTTTCTGCCGCTaGTCCTCGTGGTGCCGGATCACCATGCGCACCACCTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SLACSSLRARSSFCR*SSWCRITMRTTFRA
Trigger: GGCCCGGAAGGTGGTGCGCATGGTGATCCGGCACCACGAGGAGCAGCGGCAGAAAGAGGAACGGGCCCGGAGGGAGGAGCAGGCCAAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp TGCTCCTCCCTCCGGGCCCGTTCCTCTTTCTGCCGCTGCTCCTCGTaGTGCCGGATCACCATGCGCACCACCTTCCGGGCCACACCCCGT +
Preference number: 5 (lower is better)
Translates to: CSSLRARSSFCRCSS*CRITMRTTFRATPR
Trigger: ACGGGGTGTGGCCCGGAAGGTGGTGCGCATGGTGATCCGGCACCACGAGGAGCAGCGGCAGAAAGAGGAACGGGCCCGGAGGGAGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp TCCTCCCTCCGGGCCCGTTCCTCTTTCTGCCGCTGCTCCTCGTGGTaGCGGATCACCATGCGCACCACCTTCCGGGCCACACCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: SSLRARSSFCRCSSW*RITMRTTFRATPRF
Trigger: GAAACGGGGTGTGGCCCGGAAGGTGGTGCGCATGGTGATCCGGCACCACGAGGAGCAGCGGCAGAAAGAGGAACGGGCCCGGAGGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp CGACGCAGCTTGGCCTGCTCCTCCCTCCGGGCCCGTTCCTCTTTCTaGCGCTGCTCCTCGTGGTGCCGGATCACCATGCGCACCACCTTC +
Preference number: 5 (lower is better)
Translates to: RRSLACSSLRARSSF*RCSSWCRITMRTTF
Trigger: GAAGGTGGTGCGCATGGTGATCCGGCACCACGAGGAGCAGCGGCAGAAAGAGGAACGGGCCCGGAGGGAGGAGCAGGCCAAGCTGCGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp AACCACAAGGGAAGATGCCTGGGAAGCTGGGGACTGTGTGGAGGCTaGGGCCAGCGCCAAGGTCTGAGCTGCGGCCGGGCCCAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: NHKGRCLGSWGLCGG*GQRQGLSCGRAQGR
Trigger: CCTACCCTGGGCCCGGCCGCAGCTCAGACCTTGGCGCTGGCCCCAGCCTCCACACAGTCCCCAGCTTCCCAGGCATCTTCCCTTGTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 90 bp GTGAGCTGGGGCTGGGCCCACTGGAGAAGCTGGAGCCAGAGGGGGTaGTGGAGCCAGAGACAGCGTCTGAGTTGGACCCAGTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: VSWGWAHWRSWSQRG*WSQRQRLSWTQWWS
Trigger: GGACCACCACTGGGTCCAACTCAGACGCTGTCTCTGGCTCCAGCACCCCCTCTGGCTCCAGCTTCTCCAGTGGGCCCAGCCCCAGCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 90 bp AGCCACCACCATGGACCCTCCACTCTTCCGTCCTCGCATTCCTTCTaGTTCAAGCCGAAGGCGGGCCAGGCGGGTGAGGGGGCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SHHHGPSTLPSSHSF*FKPKAGQAGEGAAS
Trigger: GGAAGCCGCCCCCTCACCCGCCTGGCCCGCCTTCGGCTTGAAGCAGAAGGAATGCGAGGACGGAAGAGTGGAGGGTCCATGGTGGTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp TGCCTCCACTGCCTCTTCGCGCAGCACACAGATGCGGACGGTGGGTaGGAAAAAGGGCAGACGCTACTCCCAGCGAACCGCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: CLHCLFAQHTDADGG*EKGQTLLPANRRCR
Trigger: GCGGCAGCGGCGGTTCGCTGGGAGTAGCGTCTGCCCTTTTTCCCACCCACCGTCCGCATCTGTGTGCTGCGCGAAGAGGCAGTGGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS CCA 90 bp GTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTaGAGGGGCAGCCCACTCACGTCTTGGCCTTGCGGCCTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: VRPGHGGSGHGGKPR*RGSPLTSWPCGLCD
Trigger: GTCACAGAGGCCGCAAGGCCAAGACGTGAGTGGGCTGCCCCTCCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS CCA 90 bp GCCTTGCCTCCACTGCCTCTTCGCGCAGCACACAGATGCGGACGGTaGGTGGGAAAAAGGGCAGACGCTACTCCCAGCGAACCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ALPPLPLRAAHRCGR*VGKRADATPSEPPL
Trigger: CAGCGGCGGTTCGCTGGGAGTAGCGTCTGCCCTTTTTCCCACCCACCGTCCGCATCTGTGTGCTGCGCGAAGAGGCAGTGGAGGCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS GCA 90 bp CCACCGCCTTCGCGGCCTTTAAACTCCCCTGGAGACTGCGGCTACTaGCACCGCCTTGCCTCCACTGCCTCTTCGCGCAGCACACAGATG +
Preference number: 5 (lower is better)
Translates to: PPPSRPLNSPGDCGY*HRLASTASSRSTQM
Trigger: CATCTGTGTGCTGCGCGAAGAGGCAGTGGAGGCAAGGCGGTGGCAGTAGCCGCAGTCTCCAGGGGAGTTTAAAGGCCGCGAAGGCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS CCA 90 bp AGCGGCACCAGATGCCGAAACCACAAGGGAAGATGCCTGGGAAGCTaGGGACTGTGTGGAGGCTGGGGCCAGCGCCAAGGTCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SGTRCRNHKGRCLGS*GLCGGWGQRQGLSC
Trigger: GCAGCTCAGACCTTGGCGCTGGCCCCAGCCTCCACACAGTCCCCAGCTTCCCAGGCATCTTCCCTTGTGGTTTCGGCATCTGGTGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 90 bp CCACTTCGCCTGAGGGCAGGCGAGCCTGCATATCGGGAGATAGAATaGGGCGCTGTGGTGCAGGAGTCGGAGCTGGCACTGCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: PLRLRAGEPAYREIE*GAVVQESELALLWW
Trigger: CCACCACAGCAGTGCCAGCTCCGACTCCTGCACCACAGCGCCTCATTCTATCTCCCGATATGCAGGCTCGCCTGCCCTCAGGCGAAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 90 bp GCCAGGAGTGAAGCAGATGACGATGCTGGAGCCAAAGTCAGCGTGTaGGCTGGGGCTGGGCCCACTGGAGAAGCTGGAGCCAGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: ARSEADDDAGAKVSV*AGAGPTGEAGARGG
Trigger: ACCCCCTCTGGCTCCAGCTTCTCCAGTGGGCCCAGCCCCAGCTCACACGCTGACTTTGGCTCCAGCATCGTCATCTGCTTCACTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 90 bp AGAAGTGCTGTCACGGTCCAAGACGGGGAGCTGGCTGGGCCGAGGTaGTGGAGGATTCTTGGGAGGTCGGCCCCTCTTCCGTTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: RSAVTVQDGELAGPR*WRILGRSAPLPFGW
Trigger: CCACCCAAACGGAAGAGGGGCCGACCTCCCAAGAATCCTCCATCACCTCGGCCCAGCCAGCTCCCCGTCTTGGACCGTGACAGCACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp CTGACATCCTTGGCCATGGTGGAAGCAATTCGACGCAGCTTGGCCTaGTCCTCCCTCCGGGCCCGTTCCTCTTTCTGCCGCTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LTSLAMVEAIRRSLA*SSLRARSSFCRCSS
Trigger: CGAGGAGCAGCGGCAGAAAGAGGAACGGGCCCGGAGGGAGGAGCAGGCCAAGCTGCGTCGAATTGCTTCCACCATGGCCAAGGATGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp TGGATTCAACACAGCTGGAAGCCCAGAGCTCGGAGGCCGGGGTGCTaGGGCCAATGGAGGAACAGGAGTCAGTCCATCCCGAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: WIQHSWKPRARRPGC*GQWRNRSQSIPRGL
Trigger: CAAGCCCCTCGGGATGGACTGACTCCTGTTCCTCCATTGGCCCCAGCACCCCGGCCTCCGAGCTCTGGGCTTCCAGCTGTGTTGAATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp AGCTGGAGCCAGAGGGGGTGCTGGAGCCAGAGACAGCGTCTGAGTTaGACCCAGTGGTGGTCCTGGTGCCAAAGACAGTGTCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SWSQRGCWSQRQRLS*TQWWSWCQRQCLGW
Trigger: CCAGCCCAGACACTGTCTTTGGCACCAGGACCACCACTGGGTCCAACTCAGACGCTGTCTCTGGCTCCAGCACCCCCTCTGGCTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp CCGGCCCCTCCTCCTCCTCTTGGGGTAGGCGGAACACCTCCTCCTTaGCTTGGTCCAGGTCTTTGCGGGCAGCTTCCACTTGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: PAPPPPLGVGGTPPP*LGPGLCGQLPLALL
Trigger: CAGAAGAGCAAGTGGAAGCTGCCCGCAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGCCTACCCCAAGAGGAGGAGGAGGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp AGGTGCTGGCCTGGGAACTCGCTCCCTGGCAGGACTGCAGCGGGGTaGTGTGGTGGTGCTGCGAGTTTGATGGGCGGATATGACAGGAGT +
Preference number: 5 (lower is better)
Translates to: RCWPGNSLPGRTAAG*CGGAASLMGGYDRS
Trigger: ACTCCTGTCATATCCGCCCATCAAACTCGCAGCACCACCACACCACCCCGCTGCAGTCCTGCCAGGGAGCGAGTTCCCAGGCCAGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CAGCTCTCGAGAACAGAAGTGCTGTCACGGTCCAAGACGGGGAGCTaGCTGGGCCGAGGTGATGGAGGATTCTTGGGAGGTCGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: QLSRTEVLSRSKTGS*LGRGDGGFLGGRPL
Trigger: GAGGGGCCGACCTCCCAAGAATCCTCCATCACCTCGGCCCAGCCAGCTCCCCGTCTTGGACCGTGACAGCACTTCTGTTCTCGAGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp GGCATTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATTTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GICSGRGCPTASWRT*APVKVSLLPWIWKV
Trigger: CACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395059.6
CDS TCA 90 bp TGCAGCGGGGTGGTGTGGTGGTGCTGCGAGTTTGATGGGCGGATATaGCAGGAGTGTGGTTTGCCCCTTGAGTCTCAGCCCGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: CSGVVWWCCEFDGRI*QECGLPLESQPGLH
Trigger: GTGGAGCCCGGGCTGAGACTCAAGGGGCAAACCACACTCCTGTCATATCCGCCCATCAAACTCGCAGCACCACCACACCACCCCGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp AGATGGTGCCAAGGAGGGAGGTCCAGGAGCCGCTGGGACAACAGGTaGCAATGGTGGAGTCACACTGGTCAACAGAGCTGGGCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: RWCQGGRSRSRWDNR*QWWSHTGQQSWARS
Trigger: GCTTCGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCTCCCTCCTTGGCACCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 90 bp AAACTCCCCTGGAGACTGCGGCTACTGCCACCGCCTTGCCTCCACTaGCTCTTCGCGCAGCACACAGATGCGGACGGTGGGTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: KLPWRLRLLPPPCLH*LFAQHTDADGGWEK
Trigger: TTTTTCCCACCCACCGTCCGCATCTGTGTGCTGCGCGAAGAGGCAGTGGAGGCAAGGCGGTGGCAGTAGCCGCAGTCTCCAGGGGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS CCA 90 bp CATGGTCCCACTCCCAGGCTCCCCCTTGGATGCCTGAAGAATGACTaGGTTGTTATCACCAGTACTGCTGGCCGAGGGGCTGGCGTCCGG +
Preference number: 5 (lower is better)
Translates to: HGPTPRLPLGCLKND*VVITSTAGRGAGVR
Trigger: CCGGACGCCAGCCCCTCGGCCAGCAGTACTGGTGATAACAACCCAGTCATTCTTCAGGCATCCAAGGGGGAGCCTGGGAGTGGGACCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS CCA 90 bp TTCCTTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATTTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FLCSGRGCPTASWRT*APVKVSLLPWIWKV
Trigger: CACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000483083.3
CDS CCA 90 bp TGCACCACATTCCTTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: CTTFLCSGRGCPTAS*RTWAPVKVSLLPWI
Trigger: AATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000483083.3
CDS CCA 90 bp GGGGCAGCTCCGGGGGCTGAAGCACTGACTTCAGGTGAAGGACTGTaGACCAGCTTGAGAAGAGGCCTCACCAGAGTGGGTGTGGGCATG +
Preference number: 5 (lower is better)
Translates to: GAAPGAEALTSGEGL*TSLRRGLTRVGVGM
Trigger: CATGCCCACACCCACTCTGGTGAGGCCTCTTCTCAAGCTGGTCCACAGTCCTTCACCTGAAGTCAGTGCTTCAGCCCCCGGAGCTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp GGGAAGCCTGAGCTGGAGCTGGATTTGGTGCTGACGGAAAAGGACTaGCCAGAGCCGAAGCTGGCACCAGGACAGGTGAGCATGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GKPELELDLVLTEKD*PEPKLAPGQVSMLG
Trigger: CCCCAGCATGCTCACCTGTCCTGGTGCCAGCTTCGGCTCTGGCCAGTCCTTTTCCGTCAGCACCAAATCCAGCTCCAGCTCAGGCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp TCTCGAGAACAGAAGTGCTGTCACGGTCCAAGACGGGGAGCTGGCTaGGCCGAGGTGATGGAGGATTCTTGGGAGGTCGGCCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SREQKCCHGPRRGAG*AEVMEDSWEVGPSS
Trigger: GGAAGAGGGGCCGACCTCCCAAGAATCCTCCATCACCTCGGCCCAGCCAGCTCCCCGTCTTGGACCGTGACAGCACTTCTGTTCTCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp ATGGTTGGTGGCATTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: MVGGICSGRGCPTAS*RTWAPVKVSLLPWI
Trigger: AATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCCACCAACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395059.6
CDS-3UTR CAA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTAGGGGCGCCCGTGGGTaGTTCACCACCACCACTGTC +
Preference number: 5 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPRGARG*FTTTTV
Trigger: GACAGTGGTGGTGGTGAACAACCCACGGGCGCCCCT...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGGGGCCCCTGCTCGTTaGCGAGGCAACTTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWGAPAR*RGNFSV
Trigger: GACTGAGAAGTTGCCTCGCAAACGAGCAGGGGCCCC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp GCCGGGCTCGGGAGAGGTGACGGAACCGGGGCTGGTAGCATAGTTTaGGTTGATGATGGAGCCAACACAGGGGTTGGAGCTGGTACCGGT +
Preference number: 5 (lower is better)
Translates to: AGLGRGDGTGAGSIV*VDDGANTGVGAGTG
Trigger: ACCGGTACCAGCTCCAACCCCTGTGTTGGCTCCATCATCAACTCAAACTATGCTACCAGCCCCGGTTCCGTCACCTCTCCCGAGCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 90 bp CCTGTCAGCCTCCAGTGGCTCCTGAAGTGGCTCATCAGATGCTGCTaGGGGTGGGAGCTCCAGGCCATTGCTCTCACTCACACACAGGGG +
Preference number: 5 (lower is better)
Translates to: PVSLQWLLKWLIRCC*GWELQAIALTHTQG
Trigger: CCCCTGTGTGTGAGTGAGAGCAATGGCCTGGAGCTCCCACCCTCAGCAGCATCTGATGAGCCACTTCAGGAGCCACTGGAGGCTGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 90 bp CGAAGCACTTTGGGGCCTGGTGGTTGTCCTGGCCGACCAGTCCCTTaGCCCCTAATTTCCACATCAGCACTGGTGCGACGCCGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: RSTLGPGGCPGRPVP*PLISTSALVRRRGG
Trigger: ACCTCCTCGGCGTCGCACCAGTGCTGATGTGGAAATTAGGGGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp ATGGTAACCAGCCAGTCTAGCCCAATGTGCTGGTACTCCCGGAGCTaGCCCCGCAGAAGCAGGGGAATGGGCGTCTTTACCTGGGTCGTG +
Preference number: 5 (lower is better)
Translates to: MVTSQSSPMCWYSRS*PRRSRGMGVFTWVV
Trigger: CACGACCCAGGTAAAGACGCCCATTCCCCTGCTTCTGCGGGGCCAGCTCCGGGAGTACCAGCACATTGGGCTAGACTGGCTGGTTACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp GTCCAGGAGCCGCTGGGACAACAGGTGCCAATGGTGGAGTCACACTaGTCAACAGAGCTGGGCCCGAAGCAGAAACAGTCAAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VQEPLGQQVPMVESH*STELGPKQKQSRGL
Trigger: CAGCCCCCTTGACTGTTTCTGCTTCGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGGCTCCTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp TGCCAAGGAGGGAGGTCCAGGAGCCGCTGGGACAACAGGTGCCAATaGTGGAGTCACACTGGTCAACAGAGCTGGGCCCGAAGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: CQGGRSRSRWDNRCQ*WSHTGQQSWARSRN
Trigger: GTTTCTGCTTCGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCTCCCTCCTTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp TGGCTGGGGCCAGGAGAACGAGGGCCGATGGGGCTGGCAACAGGTTaGGGCAGGGTACAGAAATCCAGGACTTCAGTCCCATACACAGGT +
Preference number: 5 (lower is better)
Translates to: WLGPGERGPMGLATG*GRVQKSRTSVPYTG
Trigger: ACCTGTGTATGGGACTGAAGTCCTGGATTTCTGTACCCTGCCCCAACCTGTTGCCAGCCCCATCGGCCCTCGTTCTCCTGGCCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CCCTCCTCCTCCTCTTGGGGTAGGCGGAACACCTCCTCCTTGGCTTaGTCCAGGTCTTTGCGGGCAGCTTCCACTTGCTCTTCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PSSSSWGRRNTSSLA*SRSLRAASTCSSAC
Trigger: ACAGGCAGAAGAGCAAGTGGAAGCTGCCCGCAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGCCTACCCCAAGAGGAGGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CCGCCGCACCAGTTCCTTTTCCTCTACCACAGTTACCAGCCGTCCTaGCAGCTTTCGAAGCACTTTGGGGCCTGGTGGTTGTCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: PPHQFLFLYHSYQPS*QLSKHFGAWWLSWP
Trigger: CGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGGCTGGTAACTGTGGTAGAGGAAAAGGAACTGGTGCGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 90 bp CACCAGCCTCTGGAGCACCTGTGTGAGCTGAGACCACACCCCCTGTaGAAGTCTGCACTTCCACGGTGCCGCCGTACTGAAGGGAATCAC +
Preference number: 5 (lower is better)
Translates to: HQPLEHLCELRPHPL*KSALPRCRRTEGNH
Trigger: GTGATTCCCTTCAGTACGGCGGCACCGTGGAAGTGCAGACTTTCACAGGGGGTGTGGTCTCAGCTCACACAGGTGCTCCAGAGGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS TCA 90 bp ACCTTTGGGGCGAGGGGGCTCTGGCACCTTAGGCAGCCTCTTCAGTaGCCAGAAACCCTCCTTCCGCAGCTCAGCAATCCGAGTCTCGAT +
Preference number: 5 (lower is better)
Translates to: TFGARGLWHLRQPLQ*PETLLPQLSNPSLD
Trigger: ATCGAGACTCGGATTGCTGAGCTGCGGAAGGAGGGTTTCTGGTCACTGAAGAGGCTGCCTAAGGTGCCAGAGCCCCCTCGCCCCAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS GCA 90 bp GGAGGGGCTGCTCTGCATGGTCCCACTCCCAGGCTCCCCCTTGGATaGCTGAAGAATGACTGGGTTGTTATCACCAGTACTGCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: GGAALHGPTPRLPLG*LKNDWVVITSTAGR
Trigger: TCGGCCAGCAGTACTGGTGATAACAACCCAGTCATTCTTCAGGCATCCAAGGGGGAGCCTGGGAGTGGGACCATGCAGAGCAGCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS GCA 90 bp GGTGGTGCTGCGAGTTTGATGGGCGGATATGACAGGAGTGTGGTTTaGCCCTTGAGTCTCAGCCCGGGCTCCACGAAGACGCTCACTGAC +
Preference number: 5 (lower is better)
Translates to: GGAASLMGGYDRSVV*PLSLSPGSTKTLTD
Trigger: GTCAGTGAGCGTCTTCGTGGAGCCCGGGCTGAGACTCAAGGGGCAAACCACACTCCTGTCATATCCGCCCATCAAACTCGCAGCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CAAGGAGGGAGGTCCAGGAGCCGCTGGGACAACAGGTGCCAATGGTaGAGTCACACTGGTCAACAGAGCTGGGCCCGAAGCAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: QGGRSRSRWDNRCQW*SHTGQQSWARSRNS
Trigger: ACTGTTTCTGCTTCGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCTCCCTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp CAGGCCCAGGGACTGGGTCAGCCCCATTGGTTTTTCCCTTCAAGGTaGATGAGGGTGCCTCATCCACACCTCTCCCAGCATCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QAQGLGQPHWFFPSR*MRVPHPHLSQHLLE
Trigger: CTCCAGCAGATGCTGGGAGAGGTGTGGATGAGGCACCCTCATCCACCTTGAAGGGAAAAACCAATGGGGCTGACCCAGTCCCTGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS-3UTR CAA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGTCCCACTTCGGGCCCTaGTTAGCCAGGTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELSHFGP*LARSAA
Trigger: GGCTGCTGACCTGGCTAACAAGGGCCCGAAGTGGGA...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGTGCACCACATTCCTTaGCAGCGGGCGGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRREVHHIP*QRAGLP
Trigger: GGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCAC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp GTGTGTCAGGCTCATCCTTGGAAACAGGCAGCCGGGATACCATGGTaGCAGGCAAGGGAGCGGCACCAGATGCCGAAACCACAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VCQAHPWKQAAGIPW*QARERHQMPKPQGK
Trigger: CTTCCCTTGTGGTTTCGGCATCTGGTGCCGCTCCCTTGCCTGTCACCATGGTATCCCGGCTGCCTGTTTCCAAGGATGAGCCTGACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 90 bp CATCTTCCTCATCCTCACTCCGGTCCTCCACAGAGTCTGACTGACTaGTACTATCCTCCTGAGGAGGCTCTTCCGCTTCCACGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: HLPHPHSGPPQSLTD*YYPPEEALPLPRAP
Trigger: AGGGGCCCGTGGAAGCGGAAGAGCCTCCTCAGGAGGATAGTAGCAGTCAGTCAGACTCTGTGGAGGACCGGAGTGAGGATGAGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 90 bp ACCTTCAGGCAGCACTGTAAGGGTGGTCCCCTCAGCAGAATCTGGTaGCTCCTGCTCTTGACCATTGGGGATGCTGCCAGCCTCCAAGGT +
Preference number: 5 (lower is better)
Translates to: TFRQHCKGGPLSRIW*LLLLTIGDAASLQG
Trigger: ACCTTGGAGGCTGGCAGCATCCCCAATGGTCAAGAGCAGGAGGCACCAGATTCTGCTGAGGGGACCACCCTTACAGTGCTGCCTGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp GAAGTGGCTCATCAGATGCTGCTGAGGGTGGGAGCTCCAGGCCATTaGTCTCACTCACACACAGGGGCAACTCCTCACCTTCAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: EVAHQMLLRVGAPGH*SHSHTGATPHLQAA
Trigger: TGCTGCCTGAAGGTGAGGAGTTGCCCCTGTGTGTGAGTGAGAGCAATGGCCTGGAGCTCCCACCCTCAGCAGCATCTGATGAGCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CTCACCTTCAGGCAGCACTGTAAGGGTGGTCCCCTCAGCAGAATCTaGTGCCTCCTGCTCTTGACCATTGGGGATGCTGCCAGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LTFRQHCKGGPLSRI*CLLLLTIGDAASLQ
Trigger: TTGGAGGCTGGCAGCATCCCCAATGGTCAAGAGCAGGAGGCACCAGATTCTGCTGAGGGGACCACCCTTACAGTGCTGCCTGAAGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp GGATGGAGCTGCAACCTCAGCTGTAACGAGTTCCTGTGGCTTCTCTaGGCTGGAGGTTGGGGTCTTGGCCTCTGTCAGCTCTTCCGAGGT +
Preference number: 5 (lower is better)
Translates to: GWSCNLSCNEFLWLL*AGGWGLGLCQLFRG
Trigger: ACCTCGGAAGAGCTGACAGAGGCCAAGACCCCAACCTCCAGCCCAGAGAAGCCACAGGAACTCGTTACAGCTGAGGTTGCAGCTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CCGTCCTGGCAGCTTTCGAAGCACTTTGGGGCCTGGTGGTTGTCCTaGCCGACCAGTCCCTTGACCCCTAATTTCCACATCAGCACTGGT +
Preference number: 5 (lower is better)
Translates to: PSWQLSKHFGAWWLS*PTSPLTPNFHISTG
Trigger: ACCAGTGCTGATGTGGAAATTAGGGGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CACAGTTACCAGCCGTCCTGGCAGCTTTCGAAGCACTTTGGGGCCTaGTGGTTGTCCTGGCCGACCAGTCCCTTGACCCCTAATTTCCAC +
Preference number: 5 (lower is better)
Translates to: HSYQPSWQLSKHFGA*WLSWPTSPLTPNFH
Trigger: GTGGAAATTAGGGGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGGCTGGTAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CTTCCATCCTCATCAGAGGAACTACCCTCACTCTCCCCTTGGCCCTaGGGTTGCCGTCGCCTCCCCAATCCACAGCTCTCGAGAACAGAA +
Preference number: 5 (lower is better)
Translates to: LPSSSEELPSLSPWP*GCRRLPNPQLSRTE
Trigger: TTCTGTTCTCGAGAGCTGTGGATTGGGGAGGCGACGGCAACCCCAGGGCCAAGGGGAGAGTGAGGGTAGTTCCTCTGATGAGGATGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS-3UTR CAA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGAGCTGGAGCTGGATTaGGTGCTGACGGAAAAGGAC +
Preference number: 5 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWELELD*VLTEKD
Trigger: GTCCTTTTCCGTCAGCACCAAATCCAGCTCCAGCTC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp TGCGACGGAAGGCCTGGTGGTCCTGCAGCACCAGCTTGTAAGATGTaGTACACACATGAAAGGCATTGGGCTTGGTCCAGCCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: CDGRPGGPAAPACKM*YTHERHWAWSSPAA
Trigger: AGCGGCAGGGCTGGACCAAGCCCAATGCCTTTCATGTGTGTATCACATCTTACAAGCTGGTGCTGCAGGACCACCAGGCCTTCCGTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 90 bp AATTCCAACCCGCCTGGCCCGCTATCTGCTAAGTCCAGGTCATCCTaGATTACAGCCACCACCATGGACCCTCCACTCTTCCGTCCTCGC +
Preference number: 5 (lower is better)
Translates to: NSNPPGPLSAKSRSS*ITATTMDPPLFRPR
Trigger: GCGAGGACGGAAGAGTGGAGGGTCCATGGTGGTGGCTGTAATTCAGGATGACCTGGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp GTGGGCCCTGGAGTAGGAGGCCCACTGCCTGCATCTGCCTCACTCTaGTCTTCATCCCTGGCAAGCAAGTACTCCACCCCAAAATCATCA +
Preference number: 5 (lower is better)
Translates to: VGPGVGGPLPASASL*SSSLASKYSTPKSS
Trigger: TGATGATTTTGGGGTGGAGTACTTGCTTGCCAGGGATGAAGAGCAGAGTGAGGCAGATGCAGGCAGTGGGCCTCCTACTCCAGGGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 90 bp TCAGGAGCAGTAGCCACTTCTAACAGTACCCGGCGAGAGAGGCGGTaGCGGGGCAGAAATGTGTCTGCCTCATATCGAGAGACACGACCT +
Preference number: 5 (lower is better)
Translates to: SGAVATSNSTRRERR*RGRNVSASYRETRP
Trigger: AGGTCGTGTCTCTCGATATGAGGCAGACACATTTCTGCCCCGGCACCGCCTCTCTCGCCGGGTACTGTTAGAAGTGGCTACTGCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp CTTCTGCCCGACACAATGCCTGCTCCAGAATATGAGTCTGCTTGCTaGCCACAGTCTCTTCCTCCTCTTCAGGGGCAGAGGGCACGGATG +
Preference number: 5 (lower is better)
Translates to: LLPDTMPAPEYESAC*PQSLPPLQGQRARM
Trigger: CATCCGTGCCCTCTGCCCCTGAAGAGGAGGAAGAGACTGTGGCCAGCAAGCAGACTCATATTCTGGAGCAGGCATTGTGTCGGGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000474008.1
CDS CCA 90 bp ACCAAGCAAGAGAGGAGAGGAAGGAGTTACAAGACAGGTTTGGGCTaGAGGCGGTGTATGAGCTGGTGGAGGGGTACAGGCAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: TKQERRGRSYKTGLG*RRCMSWWRGTGRRR
Trigger: CCTCCTCCTGCCTGTACCCCTCCACCAGCTCATACACCGCCTCCAGCCCAAACCTGTCTTGTAACTCCTTCCTCTCCTCTCTTGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp AGTTACCAGCCGTCCTGGCAGCTTTCGAAGCACTTTGGGGCCTGGTaGTTGTCCTGGCCGACCAGTCCCTTGACCCCTAATTTCCACATC +
Preference number: 5 (lower is better)
Translates to: SYQPSWQLSKHFGAW*LSWPTSPLTPNFHI
Trigger: GATGTGGAAATTAGGGGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGGCTGGTAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGCAGGGGACACAGGATaGCTGCCTGTCATGCCGTCC +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRREAGDTG*LPVMPS
Trigger: GGACGGCATGACAGGCAGCAATCCTGTGTCCCCTGC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGATCTCGGCCTCATGCTaGGCCTGTTCTGCAATTTCG +
Preference number: 5 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWISASC*ACSAIS
Trigger: CGAAATTGCAGAACAGGCCAAGCATGAGGCCGAGAT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGCAATTCGACGCAGCTaGGCCTGCTCCTCCCTCCGG +
Preference number: 5 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQAIRRS*ACSSLR
Trigger: CCGGAGGGAGGAGCAGGCCAAGCTGCGTCGAATTGC...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGCACTGTCCGGCCTTCTaGCTTAGGTACTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELHCPAF*LRYWLQ
Trigger: CTGCAGCCAGTACCTAAGCAAGAAGGCCGGACAGTG...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGAGGGGCGCCCGTGGGTaGTTCACCACCACCACTGTC +
Preference number: 5 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQRGARG*FTTTTV
Trigger: GACAGTGGTGGTGGTGAACAACCCACGGGCGCCCCT...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGAGAAGGAGCCAGAATaGCTGTCTGTGGAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELEKEPE*LSVEPP
Trigger: TGGCGGCTCCACAGACAGCAATTCTGGCTCCTTCTC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGTTTGGGGCCTGGTGGTaGTCCTGGCCGACCAGTCCC +
Preference number: 5 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQFGAWW*SWPTSP
Trigger: GGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAA...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGGTCCGACTTTCGGAGTaGCCATCCCCTGCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELVRLSE*PSPAEE
Trigger: TTCCTCTGCAGGGGATGGCAACTCCGAAAGTCGGAC...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACGCTGGTCCCCTTGGTaGGTGGTCCCAACAAGCCGG +
Preference number: 5 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGRWSPW*VVPTSR
Trigger: CCGGCTTGTTGGGACCACCAACCAAGGGGACCAGCG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp GGCAGGAGGAGGGGTGCAGGCAGGAGAAGAACAAGGAGGAATCTGTaGAGGAGGGGGAGGAGAAGGCAAGATATGGACAGGGAGAATGGT +
Preference number: 5 (lower is better)
Translates to: GRRRGAGRRRTRRNL*RRGRRRQDMDRENG
Trigger: ACCATTCTCCCTGTCCATATCTTGCCTTCTCCTCCCCCTCCTTCACAGATTCCTCCTTGTTCTTCTCCTGCCTGCACCCCTCCTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 90 bp ACACAGCTCTGCCTCAGGCCTCAAGCCCAAGGGGAGATTAGTGACTaGGGCAGAGATGGGCACAGAAGGTGGACCAAGCAAGAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: TQLCLRPQAQGEISD*GRDGHRRWTKQERR
Trigger: TCTCCTCTCTTGCTTGGTCCACCTTCTGTGCCCATCTCTGCCTCAGTCACTAATCTCCCCTTGGGCTTGAGGCCTGAGGCAGAGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 90 bp AGGATTCTTGGGAGGTCGGCCCCTCTTCCGTTTGGGTGGGGACGTTaGAATGGTGACAGTGGTGACAGTGTTGGCAACAGTAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: RILGRSAPLPFGWGR*NGDSGDSVGNSSSG
Trigger: CCCACTGCTACTGTTGCCAACACTGTCACCACTGTCACCATTTCAACGTCCCCACCCAAACGGAAGAGGGGCCGACCTCCCAAGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp AGTCTTAAGTCAGGGAACTGGGTGCGCATGTTACACACAATACGGTaGAAAGGACGAGCCCGGGGCCAGAGCTCAGAGGCCAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: SLKSGNWVRMLHTIR*KGRARGQSSEANCS
Trigger: GGAGCAATTGGCCTCTGAGCTCTGGCCCCGGGCTCGTCCTTTGCACCGTATTGTGTGTAACATGCGCACCCAGTTCCCTGACTTAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp TGGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATTTaGAAGGTGAGAGGTTTGCTTCCCCCTGCATTAGCCACTGGACGT +
Preference number: 5 (lower is better)
Translates to: WRTWAPVKVSLLPWI*KVRGLLPPALATGR
Trigger: ACGTCCAGTGGCTAATGCAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp GCAAGCTGGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTTGCCCTaGATTTGGAAGGTGAGAGGTTTGCTTCCCCCTGCATTAGCCACT +
Preference number: 5 (lower is better)
Translates to: ASWRTWAPVKVSLLP*IWKVRGLLPPALAT
Trigger: AGTGGCTAATGCAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp CTGCAACAATTAGGGTCTCAGGCCCAGGGACTGGGTCAGCCCCATTaGTTTTTCCCTTCAAGGTGGATGAGGGTGCCTCATCCACACCTC +
Preference number: 5 (lower is better)
Translates to: LQQLGSQAQGLGQPH*FFPSRWMRVPHPHL
Trigger: GAGGTGTGGATGAGGCACCCTCATCCACCTTGAAGGGAAAAACCAATGGGGCTGACCCAGTCCCTGGGCCTGAGACCCTAATTGTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS-3UTR CAA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTGAGAGGAGTTGGGAATaGGCATTGGAGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPERSWE*ALEKRL
Trigger: CAGCCTCTTCTCCAATGCCAATTCCCAACTCCTCTC...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGAGCCAACACAGGGGTaGGAGCTGGTACCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRREEPTQG*ELVPVK
Trigger: CTTCACCGGTACCAGCTCCAACCCCTGTGTTGGCTC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGCCACCTGTTCAGCCTaGGCCTGGGTGGCTGCACGG +
Preference number: 5 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVATCSA*AWVAAR
Trigger: CCGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGGC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACTGGTGCCTCCTGCTCTaGACCATTGGGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYWCLLL*TIGDAA
Trigger: GGCAGCATCCCCAATGGTCAAGAGCAGGAGGCACCA...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAAGCCCAGGGGTGGGGTaGAGTGGCCAGCCACCACGT +
Preference number: 5 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRSPGVG*SGQPPR
Trigger: ACGTGGTGGCTGGCCACTCAACCCCACCCCTGGGCT...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp CAGAAATCCAGGACTTCAGTCCCATACACAGGTGCCAGGGCCCCATaGGCCTCACTAAGTTGGAAAATCCGTTCCAGGCGTTCAGACCGC +
Preference number: 5 (lower is better)
Translates to: QKSRTSVPYTGARAP*ASLSWKIRSRRSDR
Trigger: GCGGTCTGAACGCCTGGAACGGATTTTCCAACTTAGTGAGGCTCATGGGGCCCTGGCACCTGTGTATGGGACTGAAGTCCTGGATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp AAATTCTGCAAGCTCAGCCACCTGTTCAGCCTTGGCCTGGGTGGCTaGACGGATATCCTCTTCATCTTCTGCCCGACACAATGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KFCKLSHLFSLGLGG*TDILFIFCPTQCLL
Trigger: GAGCAGGCATTGTGTCGGGCAGAAGATGAAGAGGATATCCGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGGCTGAGCTTGCAGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp TTCCTCTCCCTCACCAGCAGGAAACCCATCGTTCTCATTAAATTCTaGAAGCTCAGCCACCTGTTCAGCCTTGGCCTGGGTGGCTGCACG +
Preference number: 5 (lower is better)
Translates to: FLSLTSRKPIVLIKF*KLSHLFSLGLGGCT
Trigger: CGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGGCTGAGCTTGCAGAATTTAATGAGAACGATGGGTTTCCTGCTGGTGAGGGAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS-3UTR CAA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGAAAGGCCTCAAAACCTaGTGGAGGCGTTTGACTAGA +
Preference number: 5 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWKGLKT*WRRLTR
Trigger: TCTAGTCAAACGCCTCCACAAGGTTTTGAGGCCTTT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTGAGTTTCGGCTCCTGCCTCAGCTTTGGTTTGGCTTGGGTGGTGATGGAGCTGATCATAGAGACAGCGTaGACGCTTGGAGAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: LSFGSCLSFGLAWVVMELIIETA*TLGEPA
Trigger: TGCAGGCTCTCCAAGCGTCAACGCTGTCTCTATGAT...CAGCTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCAGGAGCCGAAACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTCCAGTCAAAGTCAGCTaGTTGCCCTGGATTTGGAAG +
Preference number: 5 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPPVKVS*LPWIWK
Trigger: CTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGG...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGGGGCTGGCAACAGGTaGGGGCAGGGTACAGAAATC +
Preference number: 5 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGGAGNR*GQGTEI
Trigger: GATTTCTGTACCCTGCCCCAACCTGTTGCCAGCCCC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGGGAGCTCCAGGCCATaGCTCTCACTCACACACAGG +
Preference number: 5 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGGSSRP*LSLTHR
Trigger: CCTGTGTGTGAGTGAGAGCAATGGCCTGGAGCTCCC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCGGCCCCTCTTCCGTTaGGGTGGGGACGTTGAAATG +
Preference number: 5 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGRPLFR*GGDVEM
Trigger: CATTTCAACGTCCCCACCCAAACGGAAGAGGGGCCG...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGGTGATGGAGGATTCTaGGGAGGTCGGCCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGGDGGF*GGRPLF
Trigger: GAAGAGGGGCCGACCTCCCAAGAATCCTCCATCACC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS CCA 90 bp GCTACTATCCTCCTGAGGAGGCTCTTCCGCTTCCACGGGCCCCTCTaGTTCACAGTCAGAGCTATTAGCATCAACCTCATCTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: ATILLRRLFRFHGPL*FTVRAISINLIFIL
Trigger: GAGGATGAAGATGAGGTTGATGCTAATAGCTCTGACTGTGAACCAGAGGGGCCCGTGGAAGCGGAAGAGCCTCCTCAGGAGGATAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 90 bp CGCTATCTGCTAAGTCCAGGTCATCCTGAATTACAGCCACCACCATaGACCCTCCACTCTTCCGTCCTCGCATTCCTTCTGCTTCAAGCC +
Preference number: 5 (lower is better)
Translates to: RYLLSPGHPELQPPP*TLHSSVLAFLLLQA
Trigger: GGCTTGAAGCAGAAGGAATGCGAGGACGGAAGAGTGGAGGGTCCATGGTGGTGGCTGTAATTCAGGATGACCTGGACTTAGCAGATAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS-3UTR CAA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGTCCAGGGCTTTTTaGCGCTTTTCCTCAAGCCGG +
Preference number: 5 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYRSRAF*RFSSSR
Trigger: CCGGCTTGAGGAAAAGCGCAAAAAAGCCCTGGACCT...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp GATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTTCCTTCAAAGGCCTCAAAACCTaGTGGAGGCGTTTGACTAGA +
Preference number: 5 (lower is better)
Translates to: DYSGEKPEGVEGPTGPSFKGLKT*WRRLTR
Trigger: TCTAGTCAAACGCCTCCACAAGGTTTTGAGGCCTTT...GAAGGAAGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGGCTGCAGCATCCTGTaGACCTTCATCTTGACTGGC +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRREGCSIL*TFILTG
Trigger: GCCAGTCAAGATGAAGGTCAACAGGATGCTGCAGCC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTCACTGTCCGGCCTTCTaGCTTAGGTACTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGHCPAF*LRYWLQ
Trigger: CTGCAGCCAGTACCTAAGCAAGAAGGCCGGACAGTG...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTCTGGGGCAGGTGGTGTaGGCTTTAGGGACAAGGTTG +
Preference number: 5 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGLGQVV*ALGTRL
Trigger: CAACCTTGTCCCTAAAGCCAACACCACCTGCCCCAG...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGTGTCAGGCTCATCCTaGGAAACAGGCAGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGVSGSS*ETGSRD
Trigger: ATCCCGGCTGCCTGTTTCCAAGGATGAGCCTGACAC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGCGGGCAGCTTCCACTaGCTCTTCTGCCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGAGSFH*LFCLFE
Trigger: CTCAAACAGGCAGAAGAGCAAGTGGAAGCTGCCCGC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGTGTGGTTTGCCCCTaGAGTCTCAGCCCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVSVVCP*SLSPGS
Trigger: GGAGCCCGGGCTGAGACTCAAGGGGCAAACCACACT...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGGTGGTGCTGCGAGTTaGATGGGCGGATATGACAGG +
Preference number: 5 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGGGAAS*MGGYDR
Trigger: CCTGTCATATCCGCCCATCAAACTCGCAGCACCACC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGGAATGGTTATTGGATTaGGGGCTGAAATGGGTACTG +
Preference number: 5 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWEWLLD*GLKWVL
Trigger: CAGTACCCATTTCAGCCCCAAATCCAATAACCATTC...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGGGGTCGAGCGCAGTTTaGGGGTTAGTGAGACCACAG +
Preference number: 5 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQGSSAV*GLVRPQ
Trigger: CTGTGGTCTCACTAACCCCAAAACTGCGCTCGACCC...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACGTAGGCGGCCCCGCTTaGCCAGCCCAGGACTCCCAC +
Preference number: 5 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYVGGPA*PAQDSH
Trigger: GTGGGAGTCCTGGGCTGGCAAAGCGGGGCCGCCTAC...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGTGCCTACCCCCTACTTaGGTGGGAAGAAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRRECLPPT*VGRREK
Trigger: CTTCTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCA...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp ATGGAAAGCTCACCTTCTCGAGCCAACTCGCTCAGCTCCATGGCATaGTCCACCTCCCCTTCCAACTGTTCCTCAGCTGCTATAGTATCC +
Preference number: 5 (lower is better)
Translates to: MESSPSRANSLSSMA*STSPSNCSSAAIVS
Trigger: GGATACTATAGCAGCTGAGGAACAGTTGGAAGGGGAGGTGGATCATGCCATGGAGCTGAGCGAGTTGGCTCGAGAAGGTGAGCTTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 90 bp CAAGGTCAGGCTGGGTGCAGAAGGGGTGAGAGAAAGGTTCTTCTCTaGCACAGGCAGGATCTCCACAGCAACTGGCAACAGATCTTTAGG +
Preference number: 5 (lower is better)
Translates to: QGQAGCRRGERKVLL*HRQDLHSNWQQIFR
Trigger: CCTAAAGATCTGTTGCCAGTTGCTGTGGAGATCCTGCCTGTGTCAGAGAAGAACCTTTCTCTCACCCCTTCTGCACCCAGCCTGACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 90 bp CAGCTCCATGGCATGATCCACCTCCCCTTCCAACTGTTCCTCAGCTaGTATAGTATCCTCTTCATCCTCCGCTTCCTCTTCGTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: QLHGMIHLPFQLFLS*YSILFILRFLFVGS
Trigger: ACTGCCAACGAAGAGGAAGCGGAGGATGAAGAGGATACTATAGCAGCTGAGGAACAGTTGGAAGGGGAGGTGGATCATGCCATGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS-3UTR CAA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCAGGCGTCTCTGGCTGTaGAAGTTGAGGAGTGACTGC +
Preference number: 5 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSRRLWL*KLRSDC
Trigger: GCAGTCACTCCTCAACTTCAACAGCCAGAGACGCCT...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AGCTCTGATTACAGTGGGGAAAAGCCAGAGGGCGTGGAGGGACCCACTGGACCTACATGCTCGTACTTTTaGGGCATCTGCTTCTCAACA +
Preference number: 5 (lower is better)
Translates to: SSDYSGEKPEGVEGPTGPTCSYF*GICFST
Trigger: TGTTGAGAAGCAGATGCCCAAAAAGTACGAGCATGT...AGGTCCAGTGGGTCCCTCCACGCCCTCTGGCTTTTCCCCACTGTAATCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGAGCTGCATCAAAATGTaGATGACGCTCATGAAATGG +
Preference number: 5 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWSCIKM*MTLMKW
Trigger: CCATTTCATGAGCGTCATCAACATTTTGATGCAGCT...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAGACTAGGAGGGACGGAGGGATTGGGGAATGCTGGCTAACAGGTGCAGCGTTTGTCAAAGTCAGCTTGTaGCCCTGGATTTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KTRRDGGIGECWLTGAAFVKVSL*PWIWKV
Trigger: CACCTTCCAAATCCAGGGCAACAAGCTGACTTTGAC...AAACGCTGCACCTGTTAGCCAGCATTCCCCAATCCCTCCGTCCCTCCTAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACTCCATCCCGAGGGGCTaGTCTCACTACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYSIPRG*SHYNLH
Trigger: GTGAAGATTGTAGTGAGACAAGCCCCTCGGGATGGA...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGAGAGGAGTTGGGAATaGGCATTGGAGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRREERSWE*ALEKRL
Trigger: CAGCCTCTTCTCCAATGCCAATTCCCAACTCCTCTC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACATGACAATGTCTGAGTaGGAAAGGGTCCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYMTMSE*ERVPGG
Trigger: ACCCCCAGGGACCCTTTCCAACTCAGACATTGTCAT...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCAGCTTTCGAAGCACTTaGGGGCCTGGTGGTTGTCCT +
Preference number: 5 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGSFRST*GPGGCP
Trigger: AGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCT...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGACTCAAGCCGGGACTGTaGCTTGAATTGCACCACCTT +
Preference number: 5 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGLKPGL*LELHHL
Trigger: AAGGTGGTGCAATTCAAGCAACAGTCCCGGCTTGAG...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGCTCATCCTCTTGGGGTaGAAAGTCCCCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRRELILLG*KVPIFI
Trigger: GATGAAGATGGGGACTTTCAACCCCAAGAGGATGAG...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGTGCCAGCGCTGTGACTaGAAGTTCTTGATGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRRECQRCD*KFLMFC
Trigger: GCAGAACATCAAGAACTTCAAGTCACAGCGCTGGCA...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGGGAGAGAACCACTGTaGGGCTGCAGTGGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCGREPL*GCSGGK
Trigger: CTTGCCTCCACTGCAGCCCAACAGTGGTTCTCTCCC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCGTGCACCACATTCCTTaGCAGCGGGCGGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCVHHIP*QRAGLP
Trigger: GGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCAC...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGATGCTCTTCTGCCTGTTaGAGCTCCTCTCGGCTCACC +
Preference number: 5 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRCSSAC*SSSRLT
Trigger: GGTGAGCCGAGAGGAGCTCAAACAGGCAGAAGAGCA...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTGCTTGGTCCAGGTCTTaGCGGGCAGCTTCCACTTGC +
Preference number: 5 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCAWSRS*RAASTC
Trigger: GCAAGTGGAAGCTGCCCGCAAAGACCTGGACCAAGC...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCGAACAAGGGCAGGAATaGCAGCCGGAGCTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVEQGQE*QPELKL
Trigger: CAGCTTCAGCTCCGGCTGCAATTCCTGCCCTTGTTC...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCCCTTGGCCCTGGGGTaGCCGTCGCCTCCCCAATCC +
Preference number: 5 (lower is better)
Translates to: PHYHTETCKMMPYLIISCPLALG*PSPPQS
Trigger: GGATTGGGGAGGCGACGGCAACCCCAGGGCCAAGGG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGTTCCATGACAACCAGTaGCCTACCCCCTACTTTGGT +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRREFHDNQ*PTPYFG
Trigger: ACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAA...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTGGCTACTTAATCATTTCTaGTCTCCCTACTTCTCAGGT +
Preference number: 5 (lower is better)
Translates to: NRVRPGHGGSGHGGKPRWLLNHF*SPYFSG
Trigger: ACCTGAGAAGTAGGGAGACAAGAAATGATTAAGTAG...CCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACCAGGCCTGACTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp AGAAGGCAAGATATGGACAGGGAGAATGGTTATTGGATTTGGGGCTaGAATGGGTACTGGGGCAGAAACTGGGACAGGAACAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RRQDMDRENGYWIWG*NGYWGRNWDRNKGR
Trigger: CCTGCCCTTGTTCCTGTCCCAGTTTCTGCCCCAGTACCCATTTCAGCCCCAAATCCAATAACCATTCTCCCTGTCCATATCTTGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp TGCAACTTTCCGCAATCATACTGGATGAGTCTTAAGTCAGGGAACTaGGTGCGCATGTTACACACAATACGGTGCAAAGGACGAGCCCGG +
Preference number: 5 (lower is better)
Translates to: CNFPQSYWMSLKSGN*VRMLHTIRCKGRAR
Trigger: CCGGGCTCGTCCTTTGCACCGTATTGTGTGTAACATGCGCACCCAGTTCCCTGACTTAAGACTCATCCAGTATGATTGCGGAAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp TTCTCATTAAATTCTGCAAGCTCAGCCACCTGTTCAGCCTTGGCCTaGGTGGCTGCACGGATATCCTCTTCATCTTCTGCCCGACACAAT +
Preference number: 5 (lower is better)
Translates to: FSLNSASSATCSALA*VAARISSSSSARHN
Trigger: ATTGTGTCGGGCAGAAGATGAAGAGGATATCCGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGGCTGAGCTTGCAGAATTTAATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS-3UTR CAA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCAACTGCCTGACATCCTaGGCCATGGTGGAAGCAATT +
Preference number: 5 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGNCLTS*AMVEAI
Trigger: AATTGCTTCCACCATGGCCAAGGATGTCAGGCAGTT...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGCCGGGACTGTTGCTaGAATTGCACCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVSRDCC*NCTTFS
Trigger: GGAGAAGGTGGTGCAATTCAAGCAACAGTCCCGGCT...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAAGGACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGGGGAAGAGCCTGCTTaGCTGGAGGTTAATGGCTGG +
Preference number: 5 (lower is better)
Translates to: KGLYNSPKFPRGCPLSIIGEEPA*LEVNGW
Trigger: CCAGCCATTAACCTCCAGCAAAGCAGGCTCTTCCCC...TATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGATGCCAAGGCTGTTTGTaGCGCTGTGTGACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRCQGCL*RCVTAE
Trigger: CTCTGCTGTCACACAGCGCAACAAACAGCCTTGGCA...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TCAAGACTTCAAGTAGTGGTTAACAGAGTCAGGCCTGGTCATGGAGGGAGTGGCGTCAAAGTCAGCTTGTaGCCCTGGATTTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SRLQVVVNRVRPGHGGSGVKVSL*PWIWKV
Trigger: CACCTTCCAAATCCAGGGCAACAAGCTGACTTTGAC...GCCACTCCCTCCATGACCAGGCCTGACTCTGTTAACCACTACTTGAAGTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGCCAGTCAAAGTCAGCTaGTTGCCCTGGATTTGGAAG +
Preference number: 5 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQPVKVS*LPWIWK
Trigger: CTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGG...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAATGCTGGGGCCACGGTaGAGTTCAACCCTGGAACAT +
Preference number: 5 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRMLGPR*SSTLEH
Trigger: ATGTTCCAGGGTTGAACTCAACCGTGGCCCCAGCAT...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGATGCGTTTGTCTGCATaGAACCGTTCCATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQMRLSA*NRSIKA
Trigger: GGCCTTGATGGAACGGTTCAATGCAGACAAACGCAT...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATTCTCTGGGCTGGAGGTaGGGGTCTTGGCCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: KDICDFKLTGERHPTTSNSLGWR*GSWPLS
Trigger: TGACAGAGGCCAAGACCCCAACCTCCAGCCCAGAGA...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACCAATCTTCCCTCTTCTaGGGTAGATTTCTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYQSSLF*GRFLPG
Trigger: TCCAGGCAGAAATCTACCCAAGAAGAGGGAAGATTG...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGATGCCTCAGCTTTGGTTaGGCTTGGGTGGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRCLSFG*AWVVME
Trigger: CTCCATCACCACCCAAGCCAAACCAAAGCTGAGGCA...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS CCA 90 bp GCAAGATATGGACAGGGAGAATGGTTATTGGATTTGGGGCTGAAATaGGTACTGGGGCAGAAACTGGGACAGGAACAAGGGCAGGAATTG +
Preference number: 5 (lower is better)
Translates to: ARYGQGEWLLDLGLK*VLGQKLGQEQGQEL
Trigger: CAATTCCTGCCCTTGTTCCTGTCCCAGTTTCTGCCCCAGTACCCATTTCAGCCCCAAATCCAATAACCATTCTCCCTGTCCATATCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 90 bp CTAAGCTGTAAGGCTGATGGTTCTTGGAACTGTCAGGGGTACCACTaGTTGAAGACGCACGTCTGTGAAGGCCAAAGCAGTCCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: LSCKADGSWNCQGYH*LKTHVCEGQSSPFC
Trigger: ACAAAAAGGACTGCTTTGGCCTTCACAGACGTGCGTCTTCAACCAGTGGTACCCCTGACAGTTCCAAGAACCATCAGCCTTACAGCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS-3UTR CAA 90 bp GTGATGATCCCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAGGACTGTTGCTTGAATaGCACCACCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: VMIPISMTTSCLPPTLVGGLLLE*HHLLHI
Trigger: AATGTGGAGAAGGTGGTGCAATTCAAGCAACAGTCC...TCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGGGATCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACTCTTCCTCATCCTCTaGGGGTTGAAAGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRLFLIL*GLKVPI
Trigger: GATGGGGACTTTCAACCCCAAGAGGATGAGGAAGAG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCTGCCAAGGCTGTTTGTaGCGCTGTGTGACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: SGKRLLSTCRAIPLLSTSCQGCL*RCVTAE
Trigger: CTCTGCTGTCACACAGCGCAACAAACAGCCTTGGCA...GGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCTCTGGCTGTTGAAGTaGAGGAGTGACTGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: KDICDFKLTGERHPTTSNLWLLK*RSDCQR
Trigger: GCGCTGGCAGTCACTCCTCAACTTCAACAGCCAGAG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp ACACGCCCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCACCTTCATTATACTCTaGGCTGCCCTCAATCATGCC +
Preference number: 5 (lower is better)
Translates to: TRPGKRRDLSKCHSSTWSTFIIL*AALNHA
Trigger: GGCATGATTGAGGGCAGCCAAGAGTATAATGAAGGT...GGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGGGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGACCTTGTGGAGGCGTTaGACTAGACCTTCATTATAC +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRRETLWRR*TRPSLY
Trigger: GTATAATGAAGGTCTAGTCAAACGCCTCCACAAGGT...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCTGTTGACCTTCATCTaGACTGGCTTGGGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: KDICDFKLTGERHPTTSNLLTFI*TGLGRG
Trigger: ACCCCGGCCCAAGCCAGTCAAGATGAAGGTCAACAG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATCTGGGGCAGGTGGTGTaGGCTTTAGGGACAAGGTTG +
Preference number: 5 (lower is better)
Translates to: KDICDFKLTGERHPTTSNLGQVV*ALGTRL
Trigger: CAACCTTGTCCCTAAAGCCAACACCACCTGCCCCAG...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTGTGTCAGGCTCATCCTaGGAAACAGGCAGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: KPSGKRLLSTCRAIPLLSVSGSS*ETGSRD
Trigger: ATCCCGGCTGCCTGTTTCCAAGGATGAGCCTGACAC...AGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCGGTGGCCCTCTGCCTaGAGCTGCCGCAACAGCACT +
Preference number: 5 (lower is better)
Translates to: PHYHTETCKMMPYLIISCRWPSA*SCRNST
Trigger: AGTGCTGTTGCGGCAGCTCAAGGCAGAGGGCCACCG...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCACCTCCTCCTTGGCTaGGTCCAGGTCTTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMHLLLG*VQVFAG
Trigger: GCCCGCAAAGACCTGGACCAAGCCAAGGAGGAGGTG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACAGCAGGGAGAATGGTTATaGGATTTGGGGCTGAAATGG +
Preference number: 5 (lower is better)
Translates to: NPPPDQKIRSLLTRMLIQQGEWL*DLGLKW
Trigger: CCATTTCAGCCCCAAATCCAATAACCATTCTCCCTG...CTGTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp GCTGTAAGGCTGATGGTTCTTGGAACTGTCAGGGGTACCACTGGTTaGAGACGCACGTCTGTGAAGGCCAAAGCAGTCCTTTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: AVRLMVLGTVRGTTG*RRTSVKAKAVLFVF
Trigger: AAAAACAAAAAGGACTGCTTTGGCCTTCACAGACGTGCGTCTTCAACCAGTGGTACCCCTGACAGTTCCAAGAACCATCAGCCTTACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS-3UTR CAA 90 bp ACTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTACCACCTTCTCCACATaGCTCCAGAACTGCCTGACA +
Preference number: 5 (lower is better)
Translates to: TLQFPQIPKRLPPEYYRCTTFST*LQNCLT
Trigger: TGTCAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGT...ACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTGGGCCTCTGCATCATaGCCTTCCTGTTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVWASAS*PSCCSS
Trigger: TGAAGAACAACAGGAAGGCAATGATGCAGAGGCCCA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCAACCCTCCACCAGACCAGAAAATCAGAAGCCTCCTTACGCGGATGCTCATACATGCTGAACTTCCACTaGTTTCTTCCTCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: PTLHQTRKSEASLRGCSYMLNFH*FLPPLN
Trigger: ATTCAGAGGAGGAAGAAACAAGTGGAAGTTCAGCAT...GTATGAGCATCCGCGTAAGGAGGCTTCTGATTTTCTGGTCTGGTGGAGGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCCATTTCCATGACAACCAGTTGCCTACCCCCTACTTTGGTGGGAAGAAGGGAGGAGGGTCGAACAGATTaGGATGATTGCAAACTTTTC +
Preference number: 5 (lower is better)
Translates to: PISMTTSCLPPTLVGRREEGRTD*DDCKLF
Trigger: GAAAAGTTTGCAATCATCCAAATCTGTTCGACCCTC...CTCCCTTCTTCCCACCAAAGTAGGGGGTAGGCAACTGGTTGTCATGGAAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTGCTTTAGGGACAAGGTaGGCGTGGGAGGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: PHYHTETCKMMPYLIISCALGTR*AWEAVR
Trigger: CCTCACGGCCTCCCACGCCAACCTTGTCCCTAAAGC...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGGCTTTAGGGACAAGGTaGGCGTGGGAGGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: KETATGNHKRDREEFLLLALGTR*AWEAVR
Trigger: CCTCACGGCCTCCCACGCCAACCTTGTCCCTAAAGC...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGACTTGTTGCCCTGGATTaGGAAGGTGAGAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRLVALD*EGERFA
Trigger: AGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAG...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCGAGCCAACACAGGGGTaGGAGCTGGTACCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCEPTQG*ELVPVK
Trigger: CTTCACCGGTACCAGCTCCAACCCCTGTGTTGGCTC...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTGGCCTCTCAGGGGCTTaGGCCTTTTTACTGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PHYHTETCKMMPYLIISCGLSGA*AFLLRR
Trigger: CCGGCGCAGTAAAAAGGCCAAAGCCCCTGAGAGGCC...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCTGGAGGTTGGGGTCTaGGCCTCTGTCAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMLEVGV*ASVSSS
Trigger: GGAAGAGCTGACAGAGGCCAAGACCCCAACCTCCAG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS CCA 90 bp CTCAAAACCTTGTGGAGGCGTTTGACTAGACCTTCATTATACTCTTaGCTGCCCTCAATCATGCCAGTTAGGGGATTAGAGAACCACTCC +
Preference number: 5 (lower is better)
Translates to: LKTLWRRLTRPSLYS*LPSIMPVRGLENHS
Trigger: GGAGTGGTTCTCTAATCCCCTAACTGGCATGATTGAGGGCAGCCAAGAGTATAATGAAGGTCTAGTCAAACGCCTCCACAAGGTTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS-3UTR CAA 90 bp AGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCTGGGCCTCTGCATCATaGCCTTCCTGTTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SGKRLLSTCRAIPLLSTSWASAS*PSCCSS
Trigger: TGAAGAACAACAGGAAGGCAATGATGCAGAGGCCCA...GGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTGGATGCCAAGGCTGTTaGTTGCGCTGTGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSGCQGC*LRCVTA
Trigger: TGCTGTCACACAGCGCAACAAACAGCCTTGGCATCC...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CTCTACAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCTCCGCTTCCTCTTCGTaGGCAGTAAACTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: LYNSPKFPRGCPLSIIDVSASSS*AVNSSS
Trigger: TGATGAAGAGTTTACTGCCAACGAAGAGGAAGCGGA...GACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTGTAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TCTCTACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAATGCTGAACTTCCACTaGTTTCTTCCTCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: SLLPTSQDQPSGWSGKNQMLNFH*FLPPLN
Trigger: ATTCAGAGGAGGAAGAAACAAGTGGAAGTTCAGCAT...TTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATGCCAGCGCTGTGACTaGAAGTTCTTGATGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITCQRCD*KFLMFC
Trigger: GCAGAACATCAAGAACTTCAAGTCACAGCGCTGGCA...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACAGGCGTCTCTGGCTGTaGAAGTTGAGGAGTGACTGC +
Preference number: 5 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYRRLWL*KLRSDC
Trigger: GCAGTCACTCCTCAACTTCAACAGCCAGAGACGCCT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CAATTCCCCCAAATTCCCAAGAGGCTGCCCCCTGAGTATTATAGATGTCAGAGAACCTTCATTATACTCTaGGCTGCCCTCAATCATGCC +
Preference number: 5 (lower is better)
Translates to: QFPQIPKRLPPEYYRCQRTFIIL*AALNHA
Trigger: GGCATGATTGAGGGCAGCCAAGAGTATAATGAAGGT...TCTCTGACATCTATAATACTCAGGGGGCAGCCTCTTGGGAATTTGGGGGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTATGCTGGGGCCACGGTaGAGTTCAACCCTGGAACAT +
Preference number: 5 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSMLGPR*SSTLEH
Trigger: ATGTTCCAGGGTTGAACTCAACCGTGGCCCCAGCAT...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AAGGATATCTGTGACTTCAAACTGACTGGGGAAAGGCACCCTACCACATCAAATAGTTACAAGACAGGTTaGGGCTGGAGGCGGTGTATG +
Preference number: 5 (lower is better)
Translates to: KDICDFKLTGERHPTTSNSYKTG*GWRRCM
Trigger: CATACACCGCCTCCAGCCCAAACCTGTCTTGTAACT...ATTTGATGTGGTAGGGTGCCTTTCCCCAGTCAGTTTGAAGTCACAGATATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATGTGACTTGAAGTTCTaGATGTTCTGCGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITCDLKF*MFCASS
Trigger: GGATGAGGCGCAGAACATCAAGAACTTCAAGTCACA...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACCTCTGGCTGTTGAAGTaGAGGAGTGACTGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYLWLLK*RSDCQR
Trigger: GCGCTGGCAGTCACTCCTCAACTTCAACAGCCAGAG...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATGGGAGAGAACCACTGTaGGGCTGCAGTGGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNGREPL*GCSGGK
Trigger: CTTGCCTCCACTGCAGCCCAACAGTGGTTCTCTCCC...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAAGAGAAGGAGCCAGAATaGCTGTCTGTGGAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQEKEPE*LSVEPP
Trigger: TGGCGGCTCCACAGACAGCAATTCTGGCTCCTTCTC...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCAGCTTTGGTTTGGCTaGGGTGGTGATGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMQLWFG*GGDGAD
Trigger: GTCAGCTCCATCACCACCCAAGCCAAACCAAAGCTG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS CCA 90 bp CAAACTTTTCTCAGCTGCATCAAAATGTTGATGACGCTCATGAAATaGCCTGTGGCTAGTGTCTCCTTAGTTGTGGTCTGTGCCATGAAG +
Preference number: 5 (lower is better)
Translates to: QTFLSCIKMLMTLMK*PVASVSLVVVCAMK
Trigger: CTTCATGGCACAGACCACAACTAAGGAGACACTAGCCACAGGCCATTTCATGAGCGTCATCAACATTTTGATGCAGCTGAGAAAAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS-3UTR CAA 90 bp CCAGGGAAGAGAAGGGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACAACCTTGTGGAGGCGTTaGACTAGACCTTCATTATAC +
Preference number: 5 (lower is better)
Translates to: PGKRRDLSKCHSSTWSITTLWRR*TRPSLY
Trigger: GTATAATGAAGGTCTAGTCAAACGCCTCCACAAGGT...TGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCCCTTCTCTTCCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCATCATAGAGACAGCGTaGACGCTTGGAGAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: KKQLPEIIKGTEKSSFYCIIETA*TLGEPA
Trigger: TGCAGGCTCTCCAAGCGTCAACGCTGTCTCTATGAT...GCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp GTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCACTGTTGACCTTCATCTaGACTGGCTTGGGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: VQMSLKYLVHNIKLCNSPLLTFI*TGLGRG
Trigger: ACCCCGGCCCAAGCCAGTCAAGATGAAGGTCAACAG...TGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAATGGAAGGTGAGAGGTTaGCTTCCCCCTGCATTAGCC +
Preference number: 5 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQWKVRG*LPPALA
Trigger: GGCTAATGCAGGGGGAAGCAAACCTCTCACCTTCCA...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTTGTTGCCCTGGATTaGGAAGGTGAGAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSLVALD*EGERFA
Trigger: AGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAG...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp ACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGCCCATTTATTACAGTTGGGAATTGGCATaGGAGAAGAGGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TGNHKRDREEFLLLPIYYSWELA*EKRLAQ
Trigger: CTGGGCCAGCCTCTTCTCCAATGCCAATTCCCAACT...GTAATAAATGGGCAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TTCTTTTTGGGGCCACGGAAAGGTTCTAAGTTGATTGTGTTGATGATTGTACAAGAGCTGGAGCTGGATTaGGTGCTGACGGAAAAGGAC +
Preference number: 5 (lower is better)
Translates to: FFLGPRKGSKLIVLMIVQELELD*VLTEKD
Trigger: GTCCTTTTCCGTCAGCACCAAATCCAGCTCCAGCTC...TTGTACAATCATCAACACAATCAACTTAGAACCTTTCCGTGGCCCCAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TACTTCCAACCAGCCAGGACCAACCTAGCGGCTGGTCAGGTAAAAACCAAAGGTATGTCACTCAAGTACTaGGTCCATAACATTAAGCTT +
Preference number: 5 (lower is better)
Translates to: YFQPARTNLAAGQVKTKGMSLKY*VHNIKL
Trigger: AAGCTTAATGTTATGGACCAAGTACTTGAGTGACAT...ACCTTTGGTTTTTACCTGACCAGCCGCTAGGTTGGTCCTGGCTGGTTGGAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTGGATGCCAAGGCTGTTaGTTGCGCTGTGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGGCQGC*LRCVTA
Trigger: TGCTGTCACACAGCGCAACAAACAGCCTTGGCATCC...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAAAACCAAGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTTCCGCTTCCTCTTCGTaGGCAGTAAACTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: KNQVARGYYLLAEQSLYSSASSS*AVNSSS
Trigger: TGATGAAGAGTTTACTGCCAACGAAGAGGAAGCGGA...AGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACTTGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACTGTGACTTGAAGTTCTaGATGTTCTGCGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYCDLKF*MFCASS
Trigger: GGATGAGGCGCAGAACATCAAGAACTTCAAGTCACA...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AGTGGCAAGAGGCTATTATCTACTTGCAGAGCAATCCCTCTACTCTCTACTTCCAGCTGCATCAAAATGTaGATGACGCTCATGAAATGG +
Preference number: 5 (lower is better)
Translates to: SGKRLLSTCRAIPLLSTSSCIKM*MTLMKW
Trigger: CCATTTCATGAGCGTCATCAACATTTTGATGCAGCT...GGAAGTAGAGAGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTCTTGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp GGACTTGTCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATGGCTGCAGCATCCTGTaGACCTTCATCTTGACTGGC +
Preference number: 5 (lower is better)
Translates to: GLVQMSLKYLVHNIKLCNGCSIL*TFILTG
Trigger: GCCAGTCAAGATGAAGGTCAACAGGATGCTGCAGCC...ATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGACAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTTGGAAGGTGAGAGGTTaGCTTCCCCCTGCATTAGCC +
Preference number: 5 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGWKVRG*LPPALA
Trigger: GGCTAATGCAGGGGGAAGCAAACCTCTCACCTTCCA...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TTACTTAAGCTGAACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATTCCATCCCGAGGGGCTaGTCTCACTACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: LLKLNCEFNSSTTQTWAYSIPRG*SHYNLH
Trigger: GTGAAGATTGTAGTGAGACAAGCCCCTCGGGATGGA...ATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGGGAATGGAGAAAGGTAGTTGGGAATTGGCATaGGAGAAGAGGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: FQAKQPFYMKTVMGMEKGSWELA*EKRLAQ
Trigger: CTGGGCCAGCCTCTTCTCCAATGCCAATTCCCAACT...ACCTTTCTCCATTCCCATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp TTACTTAAGCTGAACTGTGAGTTTAACTCAAGTACTACACAGACATGGGCCTATATGACAATGTCTGAGTaGGAAAGGGTCCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LLKLNCEFNSSTTQTWAYMTMSE*ERVPGG
Trigger: ACCCCCAGGGACCCTTTCCAACTCAGACATTGTCAT...ATAGGCCCATGTCTGTGTAGTACTTGAGTTAAACTCACAGTTCAGCTTAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp AGGTACTGCAACCCGTTTCAAGCAAAGCAGCCATTTTACATGAAAACAGTTATGCAGGTGCTAGGATCTTaGCAAGAACAAGAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: RYCNPFQAKQPFYMKTVMQVLGS*QEQEGG
Trigger: TCCTCCCTCTTGTTCTTGCAAAGATCCTAGCACCTG...CATAACTGTTTTCATGTAAAATGGCTGCTTTGCTTGAAACGGGTTGCAGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 90 bp TCCCAAAGTCCAAAGCAGTCTTCTTTAATAAACAGGAGGAACTCCTaGAGGCGCAGCAGTTTTCTCCTGCATAGGCTAAAAGATCTTACT +
Preference number: 5 (lower is better)
Translates to: SQSPKQSSLINRRNS*RRSSFLLHRLKDLT
Trigger: AGTAAGATCTTTTAGCCTATGCAGGAGAAAACTGCTGCGCCTTCAGGAGTTCCTCCTGTTTATTAAAGAAGACTGCTTTGGACTTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS-3UTR CAA 90 bp CCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTCTCCCTACAAGCAGAATATGCGTTaGTCTGCATTGAACCGTTCC +
Preference number: 5 (lower is better)
Translates to: PHRNLQNDALLNHFLSPYKQNMR*SALNRS
Trigger: GGAACGGTTCAATGCAGACAAACGCATATTCTGCTT...GTAGGGAGACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp CCTCATTACCACACAGAAACCTGCAAAATGATGCCCTACTTAATCATTTCTTGTACATGCTCGTACTTTTaGGGCATCTGCTTCTCAACA +
Preference number: 5 (lower is better)
Translates to: PHYHTETCKMMPYLIISCTCSYF*GICFST
Trigger: TGTTGAGAAGCAGATGCCCAAAAAGTACGAGCATGT...ACAAGAAATGATTAAGTAGGGCATCATTTTGCAGGTTTCTGTGTGGTAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS-3UTR CAA 90 bp AAAGAAACAGCTACCGGAAATCATAAAAGGGACAGAGAAGAGTTCCTTTTACTGGAGGCTATTATCTACTaGCAGAGCAATCCCTCTACT +
Preference number: 5 (lower is better)
Translates to: KETATGNHKRDREEFLLLEAIIY*QSNPST
Trigger: AGTAGAGGGATTGCTCTGCAAGTAGATAATAGCCTC...CAGTAAAAGGAACTCTTCTCTGTCCCTTTTATGATTTCCGGTAGCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGGAGGGTCGAACAGATTaGGATGATTGCAAACTTTTC +
Preference number: 5 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQEGRTD*DDCKLF
Trigger: GAAAAGTTTGCAATCATCCAAATCTGTTCGACCCTC...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS-3UTR CAA 90 bp TCCAAATGTCACTCAAGTACTTGGTCCATAACATTAAGCTTTGTAATTCACCAGTATATTAAAAACCTATaGTACAGTTTAGGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: SKCHSSTWSITLSFVIHQYIKNL*YSLGPG
Trigger: GCCTGGCCCTAAACTGTACAATAGGTTTTTAATATA...CTGGTGAATTACAAAGCTTAATGTTATGGACCAAGTACTTGAGTGACATTTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483083.3
CDS CCA 72 bp AGGGGCTGGCGTCCGGCTGCAGGGCATGCTGGGAGCTaGCCTCATTCTGGGCCACCGGCCACCGGGACCCGC +
Preference number: 6 (lower is better)
Translates to: RGWRPAAGHAGS*PHSGPPATGTR
Trigger: GCGGGTCCCGGTGGCCGGTGGCCCAGAATGAGGCCAGCTCCCAGCATGCCCTGCAGCCGGACGCCAGCCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS GCA 72 bp CTGCTGGCCGAGGGGCTGGCGTCCGGCTGCAGGGCATaGTGGGAGCTGGCCTCATTCTGGGCCACCGGCCAC +
Preference number: 6 (lower is better)
Translates to: LLAEGLASGCRA*WELASFWATGH
Trigger: GTGGCCGGTGGCCCAGAATGAGGCCAGCTCCCAGCATGCCCTGCAGCCGGACGCCAGCCCCTCGGCCAGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS CCA 72 bp TCCGGCTGCAGGGCATGCTGGGAGCTGGCCTCATTCTaGGCCACCGGCCACCGGGACCCGCCTTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SGCRACWELASF*ATGHRDPPSRA
Trigger: GGCCCTGGAAGGCGGGTCCCGGTGGCCGGTGGCCCAGAATGAGGCCAGCTCCCAGCATGCCCTGCAGCCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS CCA 72 bp CGCTGCTGCGCAGGATGCGCTGGTCCCCTTGGTTGGTaGTCCCAACAAGCCGGCGGGGGCCAGGACGTCGGC +
Preference number: 6 (lower is better)
Translates to: RCCAGCAGPLGW*SQQAGGGQDVG
Trigger: GCCGACGTCCTGGCCCCCGCCGGCTTGTTGGGACCACCAACCAAGGGGACCAGCGCATCCTGCGCAGCAGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp GGGCGCTGCTGCGCAGGATGCGCTGGTCCCCTTGGTTaGTGGTCCCAACAAGCCGGCGGGGGCCAGGACGTC +
Preference number: 6 (lower is better)
Translates to: GRCCAGCAGPLG*WSQQAGGGQDV
Trigger: GACGTCCTGGCCCCCGCCGGCTTGTTGGGACCACCAACCAAGGGGACCAGCGCATCCTGCGCAGCAGCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp GCCAGGGAGGGAGGGGCGCTGCTGCGCAGGATGCGCTaGTCCCCTTGGTTGGTGGTCCCAACAAGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: AREGGALLRRMR*SPWLVVPTSRR
Trigger: CCGCCGGCTTGTTGGGACCACCAACCAAGGGGACCAGCGCATCCTGCGCAGCAGCGCCCCTCCCTCCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TCACCAGTACTGCTGGCCGAGGGGCTGGCGTCCGGCTaGAGGGCATGCTGGGAGCTGGCCTCATTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SPVLLAEGLASG*RACWELASFWA
Trigger: GGCCCAGAATGAGGCCAGCTCCCAGCATGCCCTGCAGCCGGACGCCAGCCCCTCGGCCAGCAGTACTGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS GCA 72 bp CGGGCCCGTTCCTCTTTCTGCCGCTGCTCCTCGTGGTaGCGGATCACCATGCGCACCACCTTCCGGGCCACA +
Preference number: 6 (lower is better)
Translates to: RARSSFCRCSSW*RITMRTTFRAT
Trigger: TGTGGCCCGGAAGGTGGTGCGCATGGTGATCCGGCACCACGAGGAGCAGCGGCAGAAAGAGGAACGGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TGCTCCTCCCTCCGGGCCCGTTCCTCTTTCTGCCGCTaGTCCTCGTGGTGCCGGATCACCATGCGCACCACC +
Preference number: 6 (lower is better)
Translates to: CSSLRARSSFCR*SSWCRITMRTT
Trigger: GGTGGTGCGCATGGTGATCCGGCACCACGAGGAGCAGCGGCAGAAAGAGGAACGGGCCCGGAGGGAGGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TTGGCCTGCTCCTCCCTCCGGGCCCGTTCCTCTTTCTaGCGCTGCTCCTCGTGGTGCCGGATCACCATGCGC +
Preference number: 6 (lower is better)
Translates to: LACSSLRARSSF*RCSSWCRITMR
Trigger: GCGCATGGTGATCCGGCACCACGAGGAGCAGCGGCAGAAAGAGGAACGGGCCCGGAGGGAGGAGCAGGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp ACGAGGTGCACCACATTCCTTTGCAGCGGGCGGGGCTaGCCCACAGCAAGCTGGCGCACCTGGGCACCAGTC +
Preference number: 6 (lower is better)
Translates to: TRCTTFLCSGRG*PTASWRTWAPV
Trigger: GACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCACCTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000483083.3
CDS GCA 72 bp GAAAAAGGGCAGACGCTACTCCCAGCGAACCGCCGCTaGCGCTCCCGAGGCCTCACCAAAATGGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: EKGQTLLPANRR*RSRGLTKMAAA
Trigger: GGCGGCGGCCATTTTGGTGAGGCCTCGGGAGCGGCAGCGGCGGTTCGCTGGGAGTAGCGTCTGCCCTTTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS TCA 72 bp GTCACGGTCCAAGACGGGGAGCTGGCTGGGCCGAGGTaGTGGAGGATTCTTGGGAGGTCGGCCCCTCTTCCG +
Preference number: 6 (lower is better)
Translates to: VTVQDGELAGPR*WRILGRSAPLP
Trigger: CGGAAGAGGGGCCGACCTCCCAAGAATCCTCCATCACCTCGGCCCAGCCAGCTCCCCGTCTTGGACCGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TTCACCATGGTTGGTGGCATTTGCAGCGGGCGGGGCTaGCCCACAGCAAGCTGGCGCACCTGGGCACCAGTC +
Preference number: 6 (lower is better)
Translates to: FTMVGGICSGRG*PTASWRTWAPV
Trigger: GACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCCACCAACCATGGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395059.6
CDS GCA 72 bp TGGAGACTGCGGCTACTGCCACCGCCTTGCCTCCACTaGCTCTTCGCGCAGCACACAGATGCGGACGGTGGG +
Preference number: 6 (lower is better)
Translates to: WRLRLLPPPCLH*LFAQHTDADGG
Trigger: CCCACCGTCCGCATCTGTGTGCTGCGCGAAGAGGCAGTGGAGGCAAGGCGGTGGCAGTAGCCGCAGTCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS CCA 72 bp GGGCAGGTGGTGTTGGCTTTAGGGACAAGGTTGGCGTaGGAGGCCGTGAGGTCCCACTCAGGACCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GQVVLALGTRLA*EAVRSHSGPPG
Trigger: CCCTGGGGGTCCTGAGTGGGACCTCACGGCCTCCCACGCCAACCTTGTCCCTAAAGCCAACACCACCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CAGCCCGGTGGGCAGCCTCGGTATAAGTCCAAAAGGTaGGGTGGCTGGGGCCAGGAGAACGAGGGCCGATGG +
Preference number: 6 (lower is better)
Translates to: QPGGQPRYKSKR*GGWGQENEGRW
Trigger: CCATCGGCCCTCGTTCTCCTGGCCCCAGCCACCCCACCTTTTGGACTTATACCGAGGCTGCCCACCGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp GGTCATGGAGGGAGTGGCCACGGTGGAAAGCCTAGGTaGAGGGGCAGCCCACTCACGTCTTGGCCTTGCGGC +
Preference number: 6 (lower is better)
Translates to: GHGGSGHGGKPR*RGSPLTSWPCG
Trigger: GCCGCAAGGCCAAGACGTGAGTGGGCTGCCCCTCCACCTAGGCTTTCCACCGTGGCCACTCCCTCCATGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 72 bp CTTGAGTCTCAGCCCGGGCTCCACGAAGACGCTCACTaGCACGAGTCCCCGGCCTCTCAGGGGCTTTGGCCT +
Preference number: 6 (lower is better)
Translates to: LESQPGLHEDAH*HESPASQGLWP
Trigger: AGGCCAAAGCCCCTGAGAGGCCGGGGACTCGTGTCAGTGAGCGTCTTCGTGGAGCCCGGGCTGAGACTCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp CATGGACCCTCCACTCTTCCGTCCTCGCATTCCTTCTaGTTCAAGCCGAAGGCGGGCCAGGCGGGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: HGPSTLPSSHSF*FKPKAGQAGEG
Trigger: CCCCTCACCCGCCTGGCCCGCCTTCGGCTTGAAGCAGAAGGAATGCGAGGACGGAAGAGTGGAGGGTCCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TCGCGGCCTTTAAACTCCCCTGGAGACTGCGGCTACTaGCACCGCCTTGCCTCCACTGCCTCTTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: SRPLNSPGDCGY*HRLASTASSRS
Trigger: GCTGCGCGAAGAGGCAGTGGAGGCAAGGCGGTGGCAGTAGCCGCAGTCTCCAGGGGAGTTTAAAGGCCGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS CCA 72 bp AGCGGGCGGGGCTGCCCCACAGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATT +
Preference number: 6 (lower is better)
Translates to: SGRGCPTASWRT*APVKVSLLPWI
Trigger: AATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp GGCATTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: GICSGRGCPTAS*RTWAPVKVSLL
Trigger: CAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395059.6
CDS CCA 72 bp CTCTTGGCCACCGCCTTCGCGGCCTTTAAACTCCCCTaGAGACTGCGGCTACTGCCACCGCCTTGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: LLATAFAAFKLP*RLRLLPPPCLH
Trigger: GTGGAGGCAAGGCGGTGGCAGTAGCCGCAGTCTCCAGGGGAGTTTAAAGGCCGCGAAGGCGGTGGCCAAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS TCA 72 bp CCTGTGAAAGTCTGCACTTCCACGGTGCCGCCGTACTaGAGGGAATCACACCTGCGTCCTCGGGGGCGTGCG +
Preference number: 6 (lower is better)
Translates to: PVKVCTSTVPPY*RESHLRPRGRA
Trigger: CGCACGCCCCCGAGGACGCAGGTGTGATTCCCTTCAGTACGGCGGCACCGTGGAAGTGCAGACTTTCACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS GCA 72 bp AGAGTGGGTGCTAAAGCTGGGGCTAGGGCCAGTGTCTaGGTAGAAGCCGGGCTCGGGAGAGGTGACGGAACC +
Preference number: 6 (lower is better)
Translates to: RVGAKAGARASV*VEAGLGRGDGT
Trigger: GGTTCCGTCACCTCTCCCGAGCCCGGCTTCTACGCAGACACTGGCCCTAGCCCCAGCTTTAGCACCCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp GTCGCCTCCCCAATCCACAGCTCTCGAGAACAGAAGTaGTGTCACGGTCCAAGACGGGGAGCTGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: VASPIHSSREQK*CHGPRRGAGWA
Trigger: GGCCCAGCCAGCTCCCCGTCTTGGACCGTGACAGCACTTCTGTTCTCGAGAGCTGTGGATTGGGGAGGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp TTCCTTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: FLCSGRGCPTAS*RTWAPVKVSLL
Trigger: CAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000483083.3
CDS CCA 72 bp GGGAGGTCCAGGAGCCGCTGGGACAACAGGTGCCAATaGTGGAGTCACACTGGTCAACAGAGCTGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: GRSRSRWDNRCQ*WSHTGQQSWAR
Trigger: TCGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CCTGGGAACTCGCTCCCTGGCAGGACTGCAGCGGGGTaGTGTGGTGGTGCTGCGAGTTTGATGGGCGGATAT +
Preference number: 6 (lower is better)
Translates to: PGNSLPGRTAAG*CGGAASLMGGY
Trigger: ATATCCGCCCATCAAACTCGCAGCACCACCACACCACCCCGCTGCAGTCCTGCCAGGGAGCGAGTTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CAGCCGTCCTGGCAGCTTTCGAAGCACTTTGGGGCCTaGTGGTTGTCCTGGCCGACCAGTCCCTTGACCCCT +
Preference number: 6 (lower is better)
Translates to: QPSWQLSKHFGA*WLSWPTSPLTP
Trigger: AGGGGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CAGAAGTGCTGTCACGGTCCAAGACGGGGAGCTGGCTaGGCCGAGGTGATGGAGGATTCTTGGGAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: QKCCHGPRRGAG*AEVMEDSWEVG
Trigger: GCCGACCTCCCAAGAATCCTCCATCACCTCGGCCCAGCCAGCTCCCCGTCTTGGACCGTGACAGCACTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp TGCCTCTTCGCGCAGCACACAGATGCGGACGGTGGGTaGGAAAAAGGGCAGACGCTACTCCCAGCGAACCGC +
Preference number: 6 (lower is better)
Translates to: CLFAQHTDADGG*EKGQTLLPANR
Trigger: GCGGTTCGCTGGGAGTAGCGTCTGCCCTTTTTCCCACCCACCGTCCGCATCTGTGTGCTGCGCGAAGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS CAA 72 bp GAACTGGGGCAGGTGGTGTTGGCTTTAGGGACAAGGTaGGCGTGGGAGGCCGTGAGGTCCCACTCAGGACCC +
Preference number: 6 (lower is better)
Translates to: ELGQVVLALGTR*AWEAVRSHSGP
Trigger: GGGTCCTGAGTGGGACCTCACGGCCTCCCACGCCAACCTTGTCCCTAAAGCCAACACCACCTGCCCCAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp CCCGGCCCCTCCTCCTCCTCTTGGGGTAGGCGGAACACCTCCTCCTaGGCTTGGTCCAGGTCTTTGCGGGCAGCTTCCACTTGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PGPSSSSWGRRNTSS*AWSRSLRAASTCSS
Trigger: AGAAGAGCAAGTGGAAGCTGCCCGCAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGCCTACCCCAAGAGGAGGAGGAGGGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 90 bp AAGCTGGAGCCAGAGGGGGTGCTGGAGCCAGAGACAGCGTCTGAGTaGGACCCAGTGGTGGTCCTGGTGCCAAAGACAGTGTCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: KLEPEGVLEPETASE*DPVVVLVPKTVSGL
Trigger: CAGCCCAGACACTGTCTTTGGCACCAGGACCACCACTGGGTCCAACTCAGACGCTGTCTCTGGCTCCAGCACCCCCTCTGGCTCCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 72 bp CTGAGGGCAGGCGAGCCTGCATATCGGGAGATAGAATaGGGCGCTGTGGTGCAGGAGTCGGAGCTGGCACTG +
Preference number: 6 (lower is better)
Translates to: LRAGEPAYREIE*GAVVQESELAL
Trigger: CAGTGCCAGCTCCGACTCCTGCACCACAGCGCCTCATTCTATCTCCCGATATGCAGGCTCGCCTGCCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp GCCTTGCCTCCACTGCCTCTTCGCGCAGCACACAGATaGGGACGGTGGGTGGGAAAAAGGGCAGACGCTACT +
Preference number: 6 (lower is better)
Translates to: ALPPLPLRAAHR*GRWVGKRADAT
Trigger: AGTAGCGTCTGCCCTTTTTCCCACCCACCGTCCGCATCTGTGTGCTGCGCGAAGAGGCAGTGGAGGCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS CCA 72 bp AGCCAGTCTAGCCCAATGTGCTGGTACTCCCGGAGCTaGCCCCGCAGAAGCAGGGGAATGGGCGTCTTTACC +
Preference number: 6 (lower is better)
Translates to: SQSSPMCWYSRS*PRRSRGMGVFT
Trigger: GGTAAAGACGCCCATTCCCCTGCTTCTGCGGGGCCAGCTCCGGGAGTACCAGCACATTGGGCTAGACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp AGGTCCAGGAGCCGCTGGGACAACAGGTGCCAATGGTaGAGTCACACTGGTCAACAGAGCTGGGCCCGAAGC +
Preference number: 6 (lower is better)
Translates to: RSRSRWDNRCQW*SHTGQQSWARS
Trigger: GCTTCGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp GAAGCCAGCTCCAGGGACTCTGGAGATGCCAATGCCTaGGCACACAGCTCTGCCTCAGGCCTCAAGCCCAAG +
Preference number: 6 (lower is better)
Translates to: EASSRDSGDANA*AHSSASGLKPK
Trigger: CTTGGGCTTGAGGCCTGAGGCAGAGCTGTGTGCCCAGGCATTGGCATCTCCAGAGTCCCTGGAGCTGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CACCTCTCCCAGCATCTGCTGGAGACCTGTTCTTCTTaGGGGGCCTCCCCCTCCGACGTTTCACAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: HLSQHLLETCSS*GASPSDVSQQV
Trigger: CACCTGCTGTGAAACGTCGGAGGGGGAGGCCCCCCAAGAAGAACAGGTCTCCAGCAGATGCTGGGAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp TCATCAGAGGAACTACCCTCACTCTCCCCTTGGCCCTaGGGTTGCCGTCGCCTCCCCAATCCACAGCTCTCG +
Preference number: 6 (lower is better)
Translates to: SSEELPSLSPWP*GCRRLPNPQLS
Trigger: CGAGAGCTGTGGATTGGGGAGGCGACGGCAACCCCAGGGCCAAGGGGAGAGTGAGGGTAGTTCCTCTGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CCACTGCCTCTTCGCGCAGCACACAGATGCGGACGGTaGGTGGGAAAAAGGGCAGACGCTACTCCCAGCGAA +
Preference number: 6 (lower is better)
Translates to: PLPLRAAHRCGR*VGKRADATPSE
Trigger: TTCGCTGGGAGTAGCGTCTGCCCTTTTTCCCACCCACCGTCCGCATCTGTGTGCTGCGCGAAGAGGCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411466.6
CDS CAA 90 bp TCGAAGCACTTTGGGGCCTGGTGGTTGTCCTGGCCGACCAGTCCCTaGACCCCTAATTTCCACATCAGCACTGGTGCGACGCCGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SKHFGAWWLSWPTSP*TPNFHISTGATPRR
Trigger: CCTCCTCGGCGTCGCACCAGTGCTGATGTGGAAATTAGGGGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp CTGGACGTTGTGCCAGTGAGGCTAACTGCCCGATGCTaGCCACTTCGCCTGAGGGCAGGCGAGCCTGCATAT +
Preference number: 6 (lower is better)
Translates to: LDVVPVRLTARC*PLRLRAGEPAY
Trigger: ATATGCAGGCTCGCCTGCCCTCAGGCGAAGTGGTCAGCATCGGGCAGTTAGCCTCACTGGCACAACGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 72 bp GTGGTCCCCTCAGCAGAATCTGGTGCCTCCTGCTCTTaGCCATTGGGGATGCTGCCAGCCTCCAAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: VVPSAESGASCS*PLGMLPASKVR
Trigger: CCTGACCTTGGAGGCTGGCAGCATCCCCAATGGTCAAGAGCAGGAGGCACCAGATTCTGCTGAGGGGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp TTGGGGCCTGGTGGTTGTCCTGGCCGACCAGTCCCTTaGCCCCTAATTTCCACATCAGCACTGGTGCGACGC +
Preference number: 6 (lower is better)
Translates to: LGPGGCPGRPVP*PLISTSALVRR
Trigger: GCGTCGCACCAGTGCTGATGTGGAAATTAGGGGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp CCGGCGAGAGAGGCGGTGCCGGGGCAGAAATGTGTCTaGCTCATATCGAGAGACACGACCTTCCAGGCCAAT +
Preference number: 6 (lower is better)
Translates to: PAREAVPGQKCV*LISRDTTFQAN
Trigger: ATTGGCCTGGAAGGTCGTGTCTCTCGATATGAGGCAGACACATTTCTGCCCCGGCACCGCCTCTCTCGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp CCGATGCTGACCACTTCGCCTGAGGGCAGGCGAGCCTaGATATCGGGAGATAGAATGAGGCGCTGTGGTGCA +
Preference number: 6 (lower is better)
Translates to: PMLTTSPEGRRA*ISGDRMRRCGA
Trigger: TGCACCACAGCGCCTCATTCTATCTCCCGATATGCAGGCTCGCCTGCCCTCAGGCGAAGTGGTCAGCATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp CAAGGAGGGAGGTCCAGGAGCCGCTGGGACAACAGGTaGCAATGGTGGAGTCACACTGGTCAACAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: QGGRSRSRWDNR*QWWSHTGQQSW
Trigger: CCAGCTCTGTTGACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCTCCCTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp AATCTGGTGCCTCCTGCTCTTGACCATTGGGGATGCTaGCAGCCTCCAAGGTCAGGCTGGGTGCAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: NLVPPALDHWGC*QPPRSGWVQKG
Trigger: CCCCTTCTGCACCCAGCCTGACCTTGGAGGCTGGCAGCATCCCCAATGGTCAAGAGCAGGAGGCACCAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CATCCTTGGCCATGGTGGAAGCAATTCGACGCAGCTTaGCCTGCTCCTCCCTCCGGGCCCGTTCCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: HPWPWWKQFDAA*PAPPSGPVPLS
Trigger: AGAAAGAGGAACGGGCCCGGAGGGAGGAGCAGGCCAAGCTGCGTCGAATTGCTTCCACCATGGCCAAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp ACCAGATGGTGCCAAGGAGGGAGGTCCAGGAGCCGCTaGGACAACAGGTGCCAATGGTGGAGTCACACTGGT +
Preference number: 6 (lower is better)
Translates to: TRWCQGGRSRSR*DNRCQWWSHTG
Trigger: ACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGGCTCCTGGACCTCCCTCCTTGGCACCATCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp GAGCTGGAGCTGGATTTGGTGCTGACGGAAAAGGACTaGCCAGAGCCGAAGCTGGCACCAGGACAGGTGAGC +
Preference number: 6 (lower is better)
Translates to: ELELDLVLTEKD*PEPKLAPGQVS
Trigger: GCTCACCTGTCCTGGTGCCAGCTTCGGCTCTGGCCAGTCCTTTTCCGTCAGCACCAAATCCAGCTCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CCAGGAGAACGAGGGCCGATGGGGCTGGCAACAGGTTaGGGCAGGGTACAGAAATCCAGGACTTCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: PGERGPMGLATG*GRVQKSRTSVP
Trigger: TGGGACTGAAGTCCTGGATTTCTGTACCCTGCCCCAACCTGTTGCCAGCCCCATCGGCCCTCGTTCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CCTCCTCCTCTTGGGGTAGGCGGAACACCTCCTCCTTaGCTTGGTCCAGGTCTTTGCGGGCAGCTTCCACTT +
Preference number: 6 (lower is better)
Translates to: PPPLGVGGTPPP*LGPGLCGQLPL
Trigger: AAGTGGAAGCTGCCCGCAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGCCTACCCCAAGAGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp GTTCCTGTGGCTTCTCTGGGCTGGAGGTTGGGGTCTTaGCCTCTGTCAGCTCTTCCGAGGTCCTGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: VPVASLGWRLGS*PLSALPRSCQP
Trigger: AGGCTGACAGGACCTCGGAAGAGCTGACAGAGGCCAAGACCCCAACCTCCAGCCCAGAGAAGCCACAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CAGTTACCAGCCGTCCTGGCAGCTTTCGAAGCACTTTaGGGCCTGGTGGTTGTCCTGGCCGACCAGTCCCTT +
Preference number: 6 (lower is better)
Translates to: QLPAVLAAFEAL*GLVVVLADQSL
Trigger: AAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGGCTGGTAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp ACATCCTTGGCCATGGTGGAAGCAATTCGACGCAGCTaGGCCTGCTCCTCCCTCCGGGCCCGTTCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: TSLAMVEAIRRS*ACSSLRARSSF
Trigger: GAAAGAGGAACGGGCCCGGAGGGAGGAGCAGGCCAAGCTGCGTCGAATTGCTTCCACCATGGCCAAGGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp ACAGTTACCAGCCGTCCTGGCAGCTTTCGAAGCACTTaGGGGCCTGGTGGTTGTCCTGGCCGACCAGTCCCT +
Preference number: 6 (lower is better)
Translates to: TVTSRPGSFRST*GPGGCPGRPVP
Trigger: AGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGGCTGGTAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp GCTCATCCTTGGAAACAGGCAGCCGGGATACCATGGTaGCAGGCAAGGGAGCGGCACCAGATGCCGAAACCA +
Preference number: 6 (lower is better)
Translates to: AHPWKQAAGIPW*QARERHQMPKP
Trigger: TGGTTTCGGCATCTGGTGCCGCTCCCTTGCCTGTCACCATGGTATCCCGGCTGCCTGTTTCCAAGGATGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp CCGAGTCTCGATCTCGGCCTCATGCTTGGCCTGTTCTaGAATTTCGGCATGGCTCTTCTCCCACTTCGGGCC +
Preference number: 6 (lower is better)
Translates to: PSLDLGLMLGLF*NFGMALLPLRA
Trigger: GGCCCGAAGTGGGAGAAGAGCCATGCCGAAATTGCAGAACAGGCCAAGCATGAGGCCGAGATCGAGACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS GCA 72 bp GGAGTAGGAGGCCCACTGCCTGCATCTGCCTCACTCTaGTCTTCATCCCTGGCAAGCAAGTACTCCACCCCA +
Preference number: 6 (lower is better)
Translates to: GVGGPLPASASL*SSSLASKYSTP
Trigger: TGGGGTGGAGTACTTGCTTGCCAGGGATGAAGAGCAGAGTGAGGCAGATGCAGGCAGTGGGCCTCCTACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp AGGGTAGGAACTGGGGCAGGGCTCAAGGTCAGTGTCTaGACTGAAGCTGGGGCCAGGAGTGAAGCAGATGAC +
Preference number: 6 (lower is better)
Translates to: RVGTGAGLKVSV*TEAGARSEADD
Trigger: GTCATCTGCTTCACTCCTGGCCCCAGCTTCAGTGCAGACACTGACCTTGAGCCCTGCCCCAGTTCCTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp ATGGGGGTCAGCTGTTCTACGAGGGCAGCAATTTCCTaGTCAGCCCGGGACATCTCCTCATCCTCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: MGVSCSTRAAIS*SARDISSSSAP
Trigger: TGGGGCTGAGGATGAGGAGATGTCCCGGGCTGAGCAGGAAATTGCTGCCCTCGTAGAACAGCTGACCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp GCGAGTTTGATGGGCGGATATGACAGGAGTGTGGTTTaGCCCTTGAGTCTCAGCCCGGGCTCCACGAAGACG +
Preference number: 6 (lower is better)
Translates to: ASLMGGYDRSVV*PLSLSPGSTKT
Trigger: CGTCTTCGTGGAGCCCGGGCTGAGACTCAAGGGGCAAACCACACTCCTGTCATATCCGCCCATCAAACTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp GGGTGGCTGTGTCCGACTTTCGGAGTTGCCATCCCCTaGAGAGGAAATGGTCCCAGGGATGGGCAAATCTCG +
Preference number: 6 (lower is better)
Translates to: GWLCPTFGVAIP*RGNGPRDGQIS
Trigger: CGAGATTTGCCCATCCCTGGGACCATTTCCTCTGCAGGGGATGGCAACTCCGAAAGTCGGACACAGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp TCATACATGGTAACCAGCCAGTCTAGCCCAATGTGCTaGTACTCCCGGAGCTGGCCCCGCAGAAGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: SYMVTSQSSPMC*YSRSWPRRSRG
Trigger: TCCCCTGCTTCTGCGGGGCCAGCTCCGGGAGTACCAGCACATTGGGCTAGACTGGCTGGTTACCATGTATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CCGGGGGCTGAAGCACTGACTTCAGGTGAAGGACTGTaGACCAGCTTGAGAAGAGGCCTCACCAGAGTGGGT +
Preference number: 6 (lower is better)
Translates to: PGAEALTSGEGL*TSLRRGLTRVG
Trigger: ACCCACTCTGGTGAGGCCTCTTCTCAAGCTGGTCCACAGTCCTTCACCTGAAGTCAGTGCTTCAGCCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp TGGAGCCAGAGACAGCGTCTGAGTTGGACCCAGTGGTaGTCCTGGTGCCAAAGACAGTGTCTGGGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: WSQRQRLSWTQW*SWCQRQCLGWS
Trigger: ACTCCAGCCCAGACACTGTCTTTGGCACCAGGACCACCACTGGGTCCAACTCAGACGCTGTCTCTGGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CTGCAAGCTCAGCCACCTGTTCAGCCTTGGCCTGGGTaGCTGCACGGATATCCTCTTCATCTTCTGCCCGAC +
Preference number: 6 (lower is better)
Translates to: LQAQPPVQPWPG*LHGYPLHLLPD
Trigger: GTCGGGCAGAAGATGAAGAGGATATCCGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGGCTGAGCTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp AGAACAGAAGTGCTGTCACGGTCCAAGACGGGGAGCTaGCTGGGCCGAGGTGATGGAGGATTCTTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: RTEVLSRSKTGS*LGRGDGGFLGG
Trigger: ACCTCCCAAGAATCCTCCATCACCTCGGCCCAGCCAGCTCCCCGTCTTGGACCGTGACAGCACTTCTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 90 bp GCCTGTTCTGCAATTTCGGCATGGCTCTTCTCCCACTTCGGGCCCTaGTTAGCCAGGTCAGCAGCCTGGGATAAGCTGAACCCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ACSAISAWLFSHFGP*LARSAAWDKLNPSR
Trigger: CCTGGAGGGGTTCAGCTTATCCCAGGCTGCTGACCTGGCTAACAAGGGCCCGAAGTGGGAGAAGAGCCATGCCGAAATTGCAGAACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS CAA 90 bp TGCCCCACAGCAAGCTGGCGCACCTGGGCACCAGTCAAAGTCAGCTaGTTGCCCTGGATTTGGAAGGTGAGAGGTTTGCTTCCCCCTGCA +
Preference number: 6 (lower is better)
Translates to: CPTASWRTWAPVKVS*LPWIWKVRGLLPPA
Trigger: TGCAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp GCTGCGAGTTTGATGGGCGGATATGACAGGAGTGTGGTTTGCCCCTaGAGTCTCAGCCCGGGCTCCACGAAGACGCTCACTGACACGAGT +
Preference number: 6 (lower is better)
Translates to: AASLMGGYDRSVVCP*SLSPGSTKTLTDTS
Trigger: ACTCGTGTCAGTGAGCGTCTTCGTGGAGCCCGGGCTGAGACTCAAGGGGCAAACCACACTCCTGTCATATCCGCCCATCAAACTCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 90 bp GGCCGAGGTGATGGAGGATTCTTGGGAGGTCGGCCCCTCTTCCGTTaGGGTGGGGACGTTGAAATGGTGACAGTGGTGACAGTGTTGGCA +
Preference number: 6 (lower is better)
Translates to: GRGDGGFLGGRPLFR*GGDVEMVTVVTVLA
Trigger: TGCCAACACTGTCACCACTGTCACCATTTCAACGTCCCCACCCAAACGGAAGAGGGGCCGACCTCCCAAGAATCCTCCATCACCTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 90 bp CTGGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATTaGGAAGGTGAGAGGTTTGCTTCCCCCTGCATTAGCCACTGGACG +
Preference number: 6 (lower is better)
Translates to: LAHLGTSQSQLVALD*EGERFASPCISHWT
Trigger: CGTCCAGTGGCTAATGCAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp TTCAGTCCCATACACAGGTGCCAGGGCCCCATGAGCCTCACTAAGTaGGAAAATCCGTTCCAGGCGTTCAGACCGCTGCCGCTTCCGCTT +
Preference number: 6 (lower is better)
Translates to: FSPIHRCQGPMSLTK*ENPFQAFRPLPLPL
Trigger: AAGCGGAAGCGGCAGCGGTCTGAACGCCTGGAACGGATTTTCCAACTTAGTGAGGCTCATGGGGCCCTGGCACCTGTGTATGGGACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 90 bp AGGTGGACCAAGCAAGAGAGGAGAGGAAGGAGTTACAAGACAGGTTaGGGCTGGAGGCGGTGTATGAGCTGGTGGAGGGGTACAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RWTKQERRGRSYKTG*GWRRCMSWWRGTGR
Trigger: CCTGCCTGTACCCCTCCACCAGCTCATACACCGCCTCCAGCCCAAACCTGTCTTGTAACTCCTTCCTCTCCTCTCTTGCTTGGTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp GTGGTGTGGTGGTGCTGCGAGTTTGATGGGCGGATATaGCAGGAGTGTGGTTTGCCCCTTGAGTCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: VVWWCCEFDGRI*QECGLPLESQP
Trigger: GGGCTGAGACTCAAGGGGCAAACCACACTCCTGTCATATCCGCCCATCAAACTCGCAGCACCACCACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp GGGAGGTCGGCCCCTCTTCCGTTTGGGTGGGGACGTTaGAATGGTGACAGTGGTGACAGTGTTGGCAACAGT +
Preference number: 6 (lower is better)
Translates to: GRSAPLPFGWGR*NGDSGDSVGNS
Trigger: ACTGTTGCCAACACTGTCACCACTGTCACCATTTCAACGTCCCCACCCAAACGGAAGAGGGGCCGACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TTCTCATACATGGTAACCAGCCAGTCTAGCCCAATGTaGTGGTACTCCCGGAGCTGGCCCCGCAGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: FSYMVTSQSSPM*WYSRSWPRRSR
Trigger: CCTGCTTCTGCGGGGCCAGCTCCGGGAGTACCAGCACATTGGGCTAGACTGGCTGGTTACCATGTATGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp GTAGCCACTTCTAACAGTACCCGGCGAGAGAGGCGGTaGCGGGGCAGAAATGTGTCTGCCTCATATCGAGAG +
Preference number: 6 (lower is better)
Translates to: VATSNSTRRERR*RGRNVSASYRE
Trigger: CTCTCGATATGAGGCAGACACATTTCTGCCCCGGCACCGCCTCTCTCGCCGGGTACTGTTAGAAGTGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp GCGTCTTTACCTGGGTCGTGGCCAGCGTGTAACCCTTaGGCTGGAGACTTTCAGCTGCTGCAGCAATGTCAG +
Preference number: 6 (lower is better)
Translates to: ASLPGSWPACNP*AGDFQLLQQCQ
Trigger: CTGACATTGCTGCAGCAGCTGAAAGTCTCCAGCCCAAGGGTTACACGCTGGCCACGACCCAGGTAAAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CCGCTGGGACAACAGGTGCCAATGGTGGAGTCACACTaGTCAACAGAGCTGGGCCCGAAGCAGAAACAGTCA +
Preference number: 6 (lower is better)
Translates to: PLGQQVPMVESH*STELGPKQKQS
Trigger: TGACTGTTTCTGCTTCGGGCCCAGCTCTGTTGACCAGTGTGACTCCACCATTGGCACCTGTTGTCCCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CAGAGACAGCGTCTGAGTTGGACCCAGTGGTGGTCCTaGTGCCAAAGACAGTGTCTGGGCTGGAGTTGGTAC +
Preference number: 6 (lower is better)
Translates to: QRQRLSWTQWWS*CQRQCLGWSWY
Trigger: GTACCAACTCCAGCCCAGACACTGTCTTTGGCACCAGGACCACCACTGGGTCCAACTCAGACGCTGTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp GAGAGGAGAGGAAGGAGTTACAAGACAGGTTTGGGCTaGAGGCGGTGTATGAGCTGGTGGAGGGGTACAGGC +
Preference number: 6 (lower is better)
Translates to: ERRGRSYKTGLG*RRCMSWWRGTG
Trigger: GCCTGTACCCCTCCACCAGCTCATACACCGCCTCCAGCCCAAACCTGTCTTGTAACTCCTTCCTCTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp GGACCAGAGCGCAATGTCAGTGTGTCAGGCTCATCCTaGGAAACAGGCAGCCGGGATACCATGGTGACAGGC +
Preference number: 6 (lower is better)
Translates to: GPERNVSVSGSS*ETGSRDTMVTG
Trigger: GCCTGTCACCATGGTATCCCGGCTGCCTGTTTCCAAGGATGAGCCTGACACACTGACATTGCGCTCTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 72 bp ATACACAGGTGCCAGGGCCCCATGAGCCTCACTAAGTaGGAAAATCCGTTCCAGGCGTTCAGACCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: IHRCQGPMSLTK*ENPFQAFRPLP
Trigger: CGGCAGCGGTCTGAACGCCTGGAACGGATTTTCCAACTTAGTGAGGCTCATGGGGCCCTGGCACCTGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp TTGATGGGCGGATATGACAGGAGTGTGGTTTGCCCCTaGAGTCTCAGCCCGGGCTCCACGAAGACGCTCACT +
Preference number: 6 (lower is better)
Translates to: LMGGYDRSVVCP*SLSPGSTKTLT
Trigger: AGTGAGCGTCTTCGTGGAGCCCGGGCTGAGACTCAAGGGGCAAACCACACTCCTGTCATATCCGCCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp TCATCAGATGCTGCTGAGGGTGGGAGCTCCAGGCCATaGCTCTCACTCACACACAGGGGCAACTCCTCACCT +
Preference number: 6 (lower is better)
Translates to: SSDAAEGGSSRP*LSLTHRGNSSP
Trigger: AGGTGAGGAGTTGCCCCTGTGTGTGAGTGAGAGCAATGGCCTGGAGCTCCCACCCTCAGCAGCATCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp CTAGAGACCCTGGACGCAGCCGGGTCGAGCGCAGTTTaGGGGTTAGTGAGACCACAGGTGGTGTCAATTCCA +
Preference number: 6 (lower is better)
Translates to: LETLDAAGSSAV*GLVRPQVVSIP
Trigger: TGGAATTGACACCACCTGTGGTCTCACTAACCCCAAAACTGCGCTCGACCCGGCTGCGTCCAGGGTCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 90 bp CCCACAGCAAGCTGGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTaGCCCTGGATTTGGAAGGTGAGAGGTTTGCTTCCCCCTGCATTA +
Preference number: 6 (lower is better)
Translates to: PTASWRTWAPVKVSL*PWIWKVRGLLPPAL
Trigger: TAATGCAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 72 bp GGGAGAGGTGACGGAACCGGGGCTGGTAGCATAGTTTaGGTTGATGATGGAGCCAACACAGGGGTTGGAGCT +
Preference number: 6 (lower is better)
Translates to: GRGDGTGAGSIV*VDDGANTGVGA
Trigger: AGCTCCAACCCCTGTGTTGGCTCCATCATCAACTCAAACTATGCTACCAGCCCCGGTTCCGTCACCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 72 bp GGTCCCTGGGGGTTCCCCGTTCCCAAAGAGAGTGTCTaGGATGGAGATGAGCCTCCAAGAGTGGGTGCTAAA +
Preference number: 6 (lower is better)
Translates to: GPWGFPVPKESV*DGDEPPRVGAK
Trigger: TTTAGCACCCACTCTTGGAGGCTCATCTCCATCTCAGACACTCTCTTTGGGAACGGGGAACCCCCAGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp CATCCTCACTCCGGTCCTCCACAGAGTCTGACTGACTaGTACTATCCTCCTGAGGAGGCTCTTCCGCTTCCA +
Preference number: 6 (lower is better)
Translates to: HPHSGPPQSLTD*YYPPEEALPLP
Trigger: TGGAAGCGGAAGAGCCTCCTCAGGAGGATAGTAGCAGTCAGTCAGACTCTGTGGAGGACCGGAGTGAGGATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp TCGGTGGCCCTCTGCCTTGAGCTGCCGCAACAGCACTaGCAACGTCTGCAACTTTCCGCAATCATACTGGAT +
Preference number: 6 (lower is better)
Translates to: SVALCLELPQQH*QRLQLSAIILD
Trigger: ATCCAGTATGATTGCGGAAAGTTGCAGACGTTGGCAGTGCTGTTGCGGCAGCTCAAGGCAGAGGGCCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp AAGCTCAGCCACCTGTTCAGCCTTGGCCTGGGTGGCTaGACGGATATCCTCTTCATCTTCTGCCCGACACAA +
Preference number: 6 (lower is better)
Translates to: KLSHLFSLGLGG*TDILFIFCPTQ
Trigger: TTGTGTCGGGCAGAAGATGAAGAGGATATCCGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGGCTGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CTCCTGAGGAGGCTCTTCCGCTTCCACGGGCCCCTCTaGTTCACAGTCAGAGCTATTAGCATCAACCTCATC +
Preference number: 6 (lower is better)
Translates to: LLRRLFRFHGPL*FTVRAISINLI
Trigger: GATGAGGTTGATGCTAATAGCTCTGACTGTGAACCAGAGGGGCCCGTGGAAGCGGAAGAGCCTCCTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp AAGAGAGTGTCTGAGATGGAGATGAGCCTCCAAGAGTaGGTGCTAAAGCTGGGGCTAGGGCCAGTGTCTGCG +
Preference number: 6 (lower is better)
Translates to: KRVSEMEMSLQE*VLKLGLGPVSA
Trigger: CGCAGACACTGGCCCTAGCCCCAGCTTTAGCACCCACTCTTGGAGGCTCATCTCCATCTCAGACACTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CAGCTTTCGAAGCACTTTGGGGCCTGGTGGTTGTCCTaGCCGACCAGTCCCTTGACCCCTAATTTCCACATC +
Preference number: 6 (lower is better)
Translates to: QLSKHFGAWWLS*PTSPLTPNFHI
Trigger: GATGTGGAAATTAGGGGTCAAGGGACTGGTCGGCCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp GGACTGGGTCAGCCCCATTGGTTTTTCCCTTCAAGGTaGATGAGGGTGCCTCATCCACACCTCTCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: GLGQPHWFFPSR*MRVPHPHLSQH
Trigger: ATGCTGGGAGAGGTGTGGATGAGGCACCCTCATCCACCTTGAAGGGAAAAACCAATGGGGCTGACCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp TTAGGGTCTCAGGCCCAGGGACTGGGTCAGCCCCATTaGTTTTTCCCTTCAAGGTGGATGAGGGTGCCTCAT +
Preference number: 6 (lower is better)
Translates to: LGSQAQGLGQPH*FFPSRWMRVPH
Trigger: ATGAGGCACCCTCATCCACCTTGAAGGGAAAAACCAATGGGGCTGACCCAGTCCCTGGGCCTGAGACCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp GCAATTTCGGCATGGCTCTTCTCCCACTTCGGGCCCTaGTTAGCCAGGTCAGCAGCCTGGGATAAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: AISAWLFSHFGP*LARSAAWDKLN
Trigger: GTTCAGCTTATCCCAGGCTGCTGACCTGGCTAACAAGGGCCCGAAGTGGGAGAAGAGCCATGCCGAAATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS CAA 72 bp CCGTGGGTTGTTCACCACCACCACTGTCCGGCCTTCTaGCTTAGGTACTGGCTGCAGCATCCTGTTGACCTT +
Preference number: 6 (lower is better)
Translates to: PWVVHHHHCPAF*LRYWLQHPVDL
Trigger: AAGGTCAACAGGATGCTGCAGCCAGTACCTAAGCAAGAAGGCCGGACAGTGGTGGTGGTGAACAACCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 72 bp AGCTGGCGCACCTGGGCACCAGTCAAAGTCAGCTTGTaGCCCTGGATTTGGAAGGTGAGAGGTTTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: SWRTWAPVKVSL*PWIWKVRGLLP
Trigger: GGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAGGTGCGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp AATTGCACCACCTTCTCCACATTGCTCCAGAACTGCCTGACATCCTaGGCCATGGTGGAAGCAATTCGACGCAGCTTGGCCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: NCTTFSTLLQNCLTS*AMVEAIRRSLACSS
Trigger: GGAGGAGCAGGCCAAGCTGCGTCGAATTGCTTCCACCATGGCCAAGGATGTCAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTGCAATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp TGCATGGTCCCACTCCCAGGCTCCCCCTTGGATGCCTaGAGAATGACTGGGTTGTTATCACCAGTACTGCTG +
Preference number: 6 (lower is better)
Translates to: CMVPLPGSPLDA*RMTGLLSPVLL
Trigger: CAGCAGTACTGGTGATAACAACCCAGTCATTCTTCAGGCATCCAAGGGGGAGCCTGGGAGTGGGACCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS TCA 72 bp AGGACTTCAGTCCCATACACAGGTGCCAGGGCCCCATaGGCCTCACTAAGTTGGAAAATCCGTTCCAGGCGT +
Preference number: 6 (lower is better)
Translates to: RTSVPYTGARAP*ASLSWKIRSRR
Trigger: ACGCCTGGAACGGATTTTCCAACTTAGTGAGGCTCATGGGGCCCTGGCACCTGTGTATGGGACTGAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp AGTCTCTTCCTCCTCTTCAGGGGCAGAGGGCACGGATaGGCTAGAAGGTTCCTCCAGGGGCATATCAAACAG +
Preference number: 6 (lower is better)
Translates to: SLFLLFRGRGHG*ARRFLQGHIKQ
Trigger: CTGTTTGATATGCCCCTGGAGGAACCTTCTAGCTCATCCGTGCCCTCTGCCCCTGAAGAGGAGGAAGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000474008.1
CDS TCA 72 bp GCTGGGTGCAGAAGGGGTGAGAGAAAGGTTCTTCTCTaGCACAGGCAGGATCTCCACAGCAACTGGCAACAG +
Preference number: 6 (lower is better)
Translates to: AGCRRGERKVLL*HRQDLHSNWQQ
Trigger: CTGTTGCCAGTTGCTGTGGAGATCCTGCCTGTGTCAGAGAAGAACCTTTCTCTCACCCCTTCTGCACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp GCTCTGCATGGTCCCACTCCCAGGCTCCCCCTTGGATaGCTGAAGAATGACTGGGTTGTTATCACCAGTACT +
Preference number: 6 (lower is better)
Translates to: ALHGPTPRLPLG*LKNDWVVITST
Trigger: AGTACTGGTGATAACAACCCAGTCATTCTTCAGGCATCCAAGGGGGAGCCTGGGAGTGGGACCATGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000411466.6
CDS GCA 72 bp TGCAGAGGAAATGGTCCCAGGGATGGGCAAATCTCGTaGTTTAGGGGGTCGTCCTCGCCTTCTTTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: CRGNGPRDGQIS*FRGSSSPSFLH
Trigger: GTGGAGAAAAGAAGGCGAGGACGACCCCCTAAAGCACGAGATTTGCCCATCCCTGGGACCATTTCCTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp GACACAATGCCTGCTCCAGAATATGAGTCTGCTTGCTaGCCACAGTCTCTTCCTCCTCTTCAGGGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: DTMPAPEYESAC*PQSLPPLQGQR
Trigger: CCTCTGCCCCTGAAGAGGAGGAAGAGACTGTGGCCAGCAAGCAGACTCATATTCTGGAGCAGGCATTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000474008.1
CDS CCA 72 bp CAGTTCCTTTTCCTCTACCACAGTTACCAGCCGTCCTaGCAGCTTTCGAAGCACTTTGGGGCCTGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: QFLFLYHSYQPS*QLSKHFGAWWL
Trigger: CAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGGCTGGTAACTGTGGTAGAGGAAAAGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp TCACTACAATCTTCACCACGCCTGTATTATTCACCATaGTTGGTGGCATTTGCAGCGGGCGGGGCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: SLQSSPRLYYSP*LVAFAAGGAAP
Trigger: TGGGGCAGCCCCGCCCGCTGCAAATGCCACCAACCATGGTGAATAATACAGGCGTGGTGAAGATTGTAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395059.6
CDS CAA 72 bp ACCTTCTCCACATTGCTCCAGAACTGCCTGACATCCTaGGCCATGGTGGAAGCAATTCGACGCAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: TFSTLLQNCLTS*AMVEAIRRSLA
Trigger: GGCCAAGCTGCGTCGAATTGCTTCCACCATGGCCAAGGATGTCAGGCAGTTCTGGAGCAATGTGGAGAAGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp GTCAGCTTGTTGCCCTGGATTTGGAAGGTGAGAGGTTaGCTTCCCCCTGCATTAGCCACTGGACGTTGTGCC +
Preference number: 6 (lower is better)
Translates to: VSLLPWIWKVRG*LPPALATGRCA
Trigger: GGCACAACGTCCAGTGGCTAATGCAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp TTCCGTTTGGGTGGGGACGTTGAAATGGTGACAGTGGTGACAGTGTaGGCAACAGTAGCAGTGGGACAAACTAGCAGTGGTGGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: FRLGGDVEMVTVVTV*ATVAVGQTSSGGSG
Trigger: CCCACTCCCACCACTGCTAGTTTGTCCCACTGCTACTGTTGCCAACACTGTCACCACTGTCACCATTTCAACGTCCCCACCCAAACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp CCTGTGAAAGTCTGCACTTCCACGGTGCCGCCGTACTaGAGGGAATCACACCAGAAGCCAACAAGCCTTAAC +
Preference number: 6 (lower is better)
Translates to: PVKVCTSTVPPY*RESHQKPTSLN
Trigger: GTTAAGGCTTGTTGGCTTCTGGTGTGATTCCCTTCAGTACGGCGGCACCGTGGAAGTGCAGACTTTCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262518.9
CDS TCA 72 bp ATCTTCCTCATCCTCACTCCGGTCCTCCACAGAGTCTaGCTGACTGCTACTATCCTCCTGAGGAGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: IFLILTPVLHRV*LTATILLRRLF
Trigger: GAAGAGCCTCCTCAGGAGGATAGTAGCAGTCAGTCAGACTCTGTGGAGGACCGGAGTGAGGATGAGGAAGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 72 bp AGGCCTGGTGGTCCTGCAGCACCAGCTTGTAAGATGTaGTACACACATGAAAGGCATTGGGCTTGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RPGGPAAPACKM*YTHERHWAWSS
Trigger: GCTGGACCAAGCCCAATGCCTTTCATGTGTGTATCACATCTTACAAGCTGGTGCTGCAGGACCACCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp TGGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATTTaGAAGGTGAGAGGTTTGCTTCCCCCTGCATTAGCC +
Preference number: 6 (lower is better)
Translates to: WAPVKVSLLPWI*KVRGLLPPALA
Trigger: GGCTAATGCAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CTAAGTCCAGGTCATCCTGAATTACAGCCACCACCATaGACCCTCCACTCTTCCGTCCTCGCATTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LSPGHPELQPPP*TLHSSVLAFLL
Trigger: CAGAAGGAATGCGAGGACGGAAGAGTGGAGGGTCCATGGTGGTGGCTGTAATTCAGGATGACCTGGACTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp CTGGGCACCAGTCAAAGTCAGCTTGTTGCCCTGGATTaGGAAGGTGAGAGGTTTGCTTCCCCCTGCATTAGC +
Preference number: 6 (lower is better)
Translates to: LGTSQSQLVALD*EGERFASPCIS
Trigger: GCTAATGCAGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAGCTGACTTTGACTGGTGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 72 bp CCAGGGATGATGCTGGAGTTAATGACAATGTCTGAGTaGGAAAGGGTCCCTGGGGGTTCCCCGTTCCCAAAG +
Preference number: 6 (lower is better)
Translates to: PGMMLELMTMSE*ERVPGGSPFPK
Trigger: CTTTGGGAACGGGGAACCCCCAGGGACCCTTTCCAACTCAGACATTGTCATTAACTCCAGCATCATCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 72 bp GCTGATGGTTCTTGGAACTGTCAGGGGTACCACTGGTaGAAGACGCACGTCTGTGAAGGCCAAAGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: ADGSWNCQGYHW*KTHVCEGQSSP
Trigger: AGGACTGCTTTGGCCTTCACAGACGTGCGTCTTCAACCAGTGGTACCCCTGACAGTTCCAAGAACCATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS CAA 90 bp GACCCAGTGGTGGTCCTGGTGCCAAAGACAGTGTCTGGGCTGGAGTaGGTACCAGGGATGATGCTGGAGTTAATGACAATGTCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: DPVVVLVPKTVSGLE*VPGMMLELMTMSEL
Trigger: CAACTCAGACATTGTCATTAACTCCAGCATCATCCCTGGTACCAACTCCAGCCCAGACACTGTCTTTGGCACCAGGACCACCACTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp CCATCGTTCTCATTAAATTCTGCAAGCTCAGCCACCTGTTCAGCCTaGGCCTGGGTGGCTGCACGGATATCCTCTTCATCTTCTGCCCGA +
Preference number: 6 (lower is better)
Translates to: PSFSLNSASSATCSA*AWVAARISSSSSAR
Trigger: TCGGGCAGAAGATGAAGAGGATATCCGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGGCTGAGCTTGCAGAATTTAATGAGAACGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp ATTGCACCACCTTCTCCACATTGCTCCAGAACTGCCTaGCATCCTTGGCCATGGTGGAAGCAATTCGACGCA +
Preference number: 6 (lower is better)
Translates to: IAPPSPHCSRTA*HPWPWWKQFDA
Trigger: TGCGTCGAATTGCTTCCACCATGGCCAAGGATGTCAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTGCAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp ATCCATCCAGGCGCAGGTAGAGATGGCCATGGTAGGTaGGAAACTGCTCCAATACATCCAGCATTCGGGTCA +
Preference number: 6 (lower is better)
Translates to: IHPGAGRDGHGR*ETAPIHPAFGS
Trigger: TGACCCGAATGCTGGATGTATTGGAGCAGTTTCTCACCTACCATGGCCATCTCTACCTGCGCCTGGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp CTGATGGTTCTTGGAACTGTCAGGGGTACCACTGGTTaGAGACGCACGTCTGTGAAGGCCAAAGCAGTCCTT +
Preference number: 6 (lower is better)
Translates to: LMVLGTVRGTTG*RRTSVKAKAVL
Trigger: AAGGACTGCTTTGGCCTTCACAGACGTGCGTCTTCAACCAGTGGTACCCCTGACAGTTCCAAGAACCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS GCA 72 bp AGCAGGCGTCTCTGGCTGTTGAAGTTGAGGAGTGACTaGCAGCGCTGTGACTTGAAGTTCTTGATGTTCTGC +
Preference number: 6 (lower is better)
Translates to: SRRLWLLKLRSD*QRCDLKFLMFC
Trigger: GCAGAACATCAAGAACTTCAAGTCACAGCGCTGGCAGTCACTCCTCAACTTCAACAGCCAGAGACGCCTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp CTCACCAGCAGGAAACCCATCGTTCTCATTAAATTCTaGAAGCTCAGCCACCTGTTCAGCCTTGGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: LTSRKPIVLIKF*KLSHLFSLGLG
Trigger: ACCCAGGCCAAGGCTGAACAGGTGGCTGAGCTTGCAGAATTTAATGAGAACGATGGGTTTCCTGCTGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TTTTTGAGACGGTTTTGCTCGTCACCCAGGCTAAAGTaGAATGGCGCCATCTCAACTCACTGCAACCTCCGC +
Preference number: 6 (lower is better)
Translates to: FLRRFCSSPRLK*NGAISTHCNLR
Trigger: GCGGAGGTTGCAGTGAGTTGAGATGGCGCCATTGCACTTTAGCCTGGGTGACGAGCAAAACCGTCTCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS CCA 72 bp AAGGCTGATGGTTCTTGGAACTGTCAGGGGTACCACTaGTTGAAGACGCACGTCTGTGAAGGCCAAAGCAGT +
Preference number: 6 (lower is better)
Translates to: KADGSWNCQGYH*LKTHVCEGQSS
Trigger: ACTGCTTTGGCCTTCACAGACGTGCGTCTTCAACCAGTGGTACCCCTGACAGTTCCAAGAACCATCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS CAA 72 bp GAGGCTCTGAGACAGAAGGTCCGAGTACTTTTCAGTTaGCCCCACAATGAAGTCCAAATGCAGGTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: EALRQKVRVLFS*PHNEVQMQVQG
Trigger: GCCCTGGACCTGCATTTGGACTTCATTGTGGGGCAAACTGAAAAGTACTCGGACCTTCTGTCTCAGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp TGTGGTCTGTGCCATGAAGTCATCATAGAGACAGCGTaGACGCTTGGAGAGCCTGCAGCGGATAACATGCTC +
Preference number: 6 (lower is better)
Translates to: CGLCHEVIIETA*TLGEPAADNML
Trigger: GAGCATGTTATCCGCTGCAGGCTCTCCAAGCGTCAACGCTGTCTCTATGATGACTTCATGGCACAGACCACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 72 bp GGTGGGGACGTTGAAATGGTGACAGTGGTGACAGTGTaGGCAACAGTAGCAGTGGGACAAACTAGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: GGDVEMVTVVTV*ATVAVGQTSSG
Trigger: ACCACTGCTAGTTTGTCCCACTGCTACTGTTGCCAACACTGTCACCACTGTCACCATTTCAACGTCCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 90 bp GAGTTGGTACCAGGGATGATGCTGGAGTTAATGACAATGTCTGAGTaGGAAAGGGTCCCTGGGGGTTCCCCGTTCCCAAAGAGAGTGTCT +
Preference number: 6 (lower is better)
Translates to: ELVPGMMLELMTMSE*ERVPGGSPFPKRVS
Trigger: AGACACTCTCTTTGGGAACGGGGAACCCCCAGGGACCCTTTCCAACTCAGACATTGTCATTAACTCCAGCATCATCCCTGGTACCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp TCACGGCGAAGCAGCTCAATCTCACGCCTCTGGGCCTCTGCATCATaGCCTTCCTGTTGTTCTTCAACTTCAATCGTTTCCTCATCATCC +
Preference number: 6 (lower is better)
Translates to: SRRSSSISRLWASAS*PSCCSSTSIVSSSS
Trigger: GGATGATGAGGAAACGATTGAAGTTGAAGAACAACAGGAAGGCAATGATGCAGAGGCCCAGAGGCGTGAGATTGAGCTGCTTCGCCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp GGCCAGCGTGTAACCCTTGGGCTGGAGACTTTCAGCTaGTGCAGCAATGTCAGTAATTTCTTTCTTTGGACC +
Preference number: 6 (lower is better)
Translates to: GQRVTLGLETFS*CSNVSNFFLWT
Trigger: GGTCCAAAGAAAGAAATTACTGACATTGCTGCAGCAGCTGAAAGTCTCCAGCCCAAGGGTTACACGCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp GGTACAGAAATCCAGGACTTCAGTCCCATACACAGGTaGCAGGGCCCCATGAGCCTCACTAAGTTGGAAAAT +
Preference number: 6 (lower is better)
Translates to: GTEIQDFSPIHR*QGPMSLTKLEN
Trigger: ATTTTCCAACTTAGTGAGGCTCATGGGGCCCTGGCACCTGTGTATGGGACTGAAGTCCTGGATTTCTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TCCTCCAGGGGCATATCAAACAGCTCTCGGATGGTCTaGTATCGGATAGAACAGAGGGAAGTGTCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: SSRGISNSSRMV*YRIEQREVSES
Trigger: TGACTCTGACACTTCCCTCTGTTCTATCCGATAGCAGACCATCCGAGAGCTGTTTGATATGCCCCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS CAA 72 bp TCATTAAATTCTGCAAGCTCAGCCACCTGTTCAGCCTaGGCCTGGGTGGCTGCACGGATATCCTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: SLNSASSATCSA*AWVAARISSSS
Trigger: AGATGAAGAGGATATCCGTGCAGCCACCCAGGCCAAGGCTGAACAGGTGGCTGAGCTTGCAGAATTTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 90 bp CCCACACCCCCACTCCGAGTTGAAAGGATGAAGCAGAATATGCGTTaGTCTGCATTGAACCGTTCCATCAAGGCCTGTCTCTGTTCAACT +
Preference number: 6 (lower is better)
Translates to: PTPPLRVERMKQNMR*SALNRSIKACLCST
Trigger: AGTTGAACAGAGACAGGCCTTGATGGAACGGTTCAATGCAGACAAACGCATATTCTGCTTCATCCTTTCAACTCGGAGTGGGGGTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp CTGCCAACGTCTGCAACTTTCCGCAATCATACTGGATaGGTCTTAAGTCAGGGAACTGGGTGCGCATGTTAC +
Preference number: 6 (lower is better)
Translates to: LPTSATFRNHTG*VLSQGTGCACY
Trigger: GTAACATGCGCACCCAGTTCCCTGACTTAAGACTCATCCAGTATGATTGCGGAAAGTTGCAGACGTTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS TCA 72 bp GATATGGACAGGGAGAATGGTTATTGGATTTGGGGCTaGAATGGGTACTGGGGCAGAAACTGGGACAGGAAC +
Preference number: 6 (lower is better)
Translates to: DMDRENGYWIWG*NGYWGRNWDRN
Trigger: GTTCCTGTCCCAGTTTCTGCCCCAGTACCCATTTCAGCCCCAAATCCAATAACCATTCTCCCTGTCCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS GCA 72 bp TTGAATTGCACCACCTTCTCCACATTGCTCCAGAACTaGCTGACATCCTTGGCCATGGTGGAAGCAATTCGA +
Preference number: 6 (lower is better)
Translates to: LNCTTFSTLLQN*LTSLAMVEAIR
Trigger: TCGAATTGCTTCCACCATGGCCAAGGATGTCAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTGCAATTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp ATGACAAAGATGAACCTCTCAATGATTTCTGACAGCTaGTCTAGTCGCTGCTGGGGAAACAGTACAGCCCGG +
Preference number: 6 (lower is better)
Translates to: MTKMNLSMISDS*SSRCWGNSTAR
Trigger: CCGGGCTGTACTGTTTCCCCAGCAGCGACTAGACCAGCTGTCAGAAATCATTGAGAGGTTCATCTTTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp CCCACAATGAAGTCCAAATGCAGGTCCAGGGCTTTTTaGCGCTTTTCCTCAAGCCGGGACTGTTGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: PTMKSKCRSRAF*RFSSSRDCCLN
Trigger: ATTCAAGCAACAGTCCCGGCTTGAGGAAAAGCGCAAAAAAGCCCTGGACCTGCATTTGGACTTCATTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CAA 72 bp CTGTTGAAGTTGAGGAGTGACTGCCAGCGCTGTGACTaGAAGTTCTTGATGTTCTGCGCCTCATCCAGAATG +
Preference number: 6 (lower is better)
Translates to: LLKLRSDCQRCD*KFLMFCASSRM
Trigger: CATTCTGGATGAGGCGCAGAACATCAAGAACTTCAAGTCACAGCGCTGGCAGTCACTCCTCAACTTCAACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 72 bp TTGGAGAGCCTGCAGCGGATAACATGCTCGTACTTTTaGGGCATCTGCTTCTCAACATCCACCTTAACTCGG +
Preference number: 6 (lower is better)
Translates to: LESLQRITCSYF*GICFSTSTLTR
Trigger: CCGAGTTAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTACGAGCATGTTATCCGCTGCAGGCTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 72 bp CAATGGAGGAACAGGAGTCAGTCCATCCCGAGGGGCTaGTCTCACTACAATCTTCACCACGCCTGTATTATT +
Preference number: 6 (lower is better)
Translates to: QWRNRSQSIPRG*SHYNLHHACII
Trigger: AATAATACAGGCGTGGTGAAGATTGTAGTGAGACAAGCCCCTCGGGATGGACTGACTCCTGTTCCTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp CTCCTTAGTTGTGGTCTGTGCCATGAAGTCATCATAGAGACAGCGTaGACGCTTGGAGAGCCTGCAGCGGATAACATGCTCGTACTTTTT +
Preference number: 6 (lower is better)
Translates to: LLSCGLCHEVIIETA*TLGEPAADNMLVLF
Trigger: AAAAAGTACGAGCATGTTATCCGCTGCAGGCTCTCCAAGCGTCAACGCTGTCTCTATGATGACTTCATGGCACAGACCACAACTAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 90 bp AGCTGTAAGGCTGATGGTTCTTGGAACTGTCAGGGGTACCACTGGTaGAAGACGCACGTCTGTGAAGGCCAAAGCAGTCCTTTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: SCKADGSWNCQGYHW*KTHVCEGQSSPFCF
Trigger: AAAACAAAAAGGACTGCTTTGGCCTTCACAGACGTGCGTCTTCAACCAGTGGTACCCCTGACAGTTCCAAGAACCATCAGCCTTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS TCA 72 bp CCATCTCCCAGTTCAACATCACGCTGGTGGGAACAATaGTTAAATGGGGACCCCAGTTACCTTTCTCACAAG +
Preference number: 6 (lower is better)
Translates to: PSPSSTSRWWEQ*LNGDPSYLSHK
Trigger: CTTGTGAGAAAGGTAACTGGGGTCCCCATTTAATCATTGTTCCCACCAGCGTGATGTTGAACTGGGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp TCGTTGGCAGTAAACTCTTCATCATCTTCATCTGGATaGCAAGGCTGTTTGTTGCGCTGTGTGACAGCAGAG +
Preference number: 6 (lower is better)
Translates to: SLAVNSSSSSSG*QGCLLRCVTAE
Trigger: CTCTGCTGTCACACAGCGCAACAAACAGCCTTGGCATCCAGATGAAGATGATGAAGAGTTTACTGCCAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS GCA 72 bp CTGCAGCGGATAACATGCTCGTACTTTTTGGGCATCTaGTTCTCAACATCCACCTTAACTCGGCGCAGTAAA +
Preference number: 6 (lower is better)
Translates to: LQRITCSYFLGI*FSTSTLTRRSK
Trigger: TTTACTGCGCCGAGTTAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTACGAGCATGTTATCCGCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CTCTTCGTTGGCAGTAAACTCTTCATCATCTTCATCTaGATGCCAAGGCTGTTTGTTGCGCTGTGTGACAGC +
Preference number: 6 (lower is better)
Translates to: LFVGSKLFIIFI*MPRLFVALCDS
Trigger: GCTGTCACACAGCGCAACAAACAGCCTTGGCATCCAGATGAAGATGATGAAGAGTTTACTGCCAACGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CCA 72 bp CAGTTCAACATCACGCTGGTGGGAACAATGATTAAATaGGGACCCCAGTTACCTTTCTCACAAGCCAAGTGG +
Preference number: 6 (lower is better)
Translates to: QFNITLVGTMIK*GPQLPFSQAKW
Trigger: CCACTTGGCTTGTGAGAAAGGTAACTGGGGTCCCCATTTAATCATTGTTCCCACCAGCGTGATGTTGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS CAA 72 bp CCACTCCGAGTTGAAAGGATGAAGCAGAATATGCGTTaGTCTGCATTGAACCGTTCCATCAAGGCCTGTCTC +
Preference number: 6 (lower is better)
Translates to: PLRVERMKQNMR*SALNRSIKACL
Trigger: GAGACAGGCCTTGATGGAACGGTTCAATGCAGACAAACGCATATTCTGCTTCATCCTTTCAACTCGGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6
CDS CCA 72 bp CTCAGCTGCATCAAAATGTTGATGACGCTCATGAAATaGCCTGTGGCTAGTGTCTCCTTAGTTGTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: LSCIKMLMTLMK*PVASVSLVVVC
Trigger: ACAGACCACAACTAAGGAGACACTAGCCACAGGCCATTTCATGAGCGTCATCAACATTTTGATGCAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262518.9
ENST00000395059.6
ENST00000483083.3
CDS TCA 72 bp CCAAAGCAGTCTTCTTTAATAAACAGGAGGAACTCCTaGAGGCGCAGCAGTTTTCTCCTGCATAGGCTAAAA +
Preference number: 6 (lower is better)
Translates to: PKQSSLINRRNS*RRSSFLLHRLK
Trigger: TTTTAGCCTATGCAGGAGAAAACTGCTGCGCCTTCAGGAGTTCCTCCTGTTTATTAAAGAAGACTGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474008.1
CDS CAA 72 bp GTTGAAAGGATGAAGCAGAATATGCGTTTGTCTGCATaGAACCGTTCCATCAAGGCCTGTCTCTGTTCAACT +
Preference number: 6 (lower is better)
Translates to: VERMKQNMRLSA*NRSIKACLCST
Trigger: AGTTGAACAGAGACAGGCCTTGATGGAACGGTTCAATGCAGACAAACGCATATTCTGCTTCATCCTTTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262518.9
ENST00000395059.6