RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRC (Homo sapiens)

Ensembl gene IDs: ENSG00000197122

Ensembl transcript IDs: ENST00000358208.8, ENST00000373558.2, ENST00000373567.6, ENST00000373578.7, ENST00000467556.1, ENST00000472968.1, ENST00000477066.5, ENST00000477475.1, ENST00000489153.1, ENST00000493775.1, ENST00000497734.5

Found 815 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCATCCCACCCACCCACCATCATCAGGCCAGGCAAGGCCTTGTGCTaGCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: SSHPPTIIRPGKALC*PAWKQRQRVCLGSL
Trigger: GAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGGCCTGATGATGGTGGGTGGGTGGGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp CCACCCACCATCATCAGGCCAGGCAAGGCCTTGTGCTGCCCAGCCTaGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACAG +
Preference number: 1 (lower is better)
Translates to: PPTIIRPGKALCCPA*KQRQRVCLGSLCLQ
Trigger: CTGTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGGCCTGATGATGGTGGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp GGGCCTGGACCAGAGCTGAGCAGTTGCAGAGGCCATGGCCACATGTaGGGCAGACTCTGCAGCCCAGAGAGACAGCAGGGGCCACCCAAG +
Preference number: 1 (lower is better)
Translates to: GPGPELSSCRGHGHM*GRLCSPERQQGPPK
Trigger: CTTGGGTGGCCCCTGCTGTCTCTCTGGGCTGCAGAGTCTGCCCCACATGTGGCCATGGCCTCTGCAACTGCTCAGCTCTGGTCCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp TACTCATCCCACCCACCCACCATCATCAGGCCAGGCAAGGCCTTGTaGTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGC +
Preference number: 1 (lower is better)
Translates to: YSSHPPTIIRPGKAL*CPAWKQRQRVCLGS
Trigger: GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGGCCTGATGATGGTGGGTGGGTGGGATGAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp TGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTaGCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCA +
Preference number: 1 (lower is better)
Translates to: CPAWKQRQRVCLGSL*LQVFPEWMARGRVA
Trigger: TGCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp GATGTCCCAGGGCTAGGCTCACCATGTGTGTCCTGCCACAGGGCCTaGACCAGAGCTGAGCAGTTGCAGAGGCCATGGCCACATGTGGGG +
Preference number: 1 (lower is better)
Translates to: DVPGLGSPCVSCHRA*TRAEQLQRPWPHVG
Trigger: CCCCACATGTGGCCATGGCCTCTGCAACTGCTCAGCTCTGGTCCAGGCCCTGTGGCAGGACACACATGGTGAGCCTAGCCCTGGGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp GCCAGGACCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTaGTTGCCTCCAGAGCCGAGGGGCTCGCTCCCTTTCATAGCCGGC +
Preference number: 1 (lower is better)
Translates to: ARTRASWTLGSSMSA*LPPEPRGSLPFIAG
Trigger: GCCGGCTATGAAAGGGAGCGAGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp TCCACCACACACCCAAAGGCCGAACAGAGCCAGAGCCCAGTCTCCTaGTGTCCCAGGGCTAGGCTCACCATGTGTGTCCTGCCACAGGGC +
Preference number: 1 (lower is better)
Translates to: STTHPKAEQSQSPVS*CPRARLTMCVLPQG
Trigger: GCCCTGTGGCAGGACACACATGGTGAGCCTAGCCCTGGGACATCAGGAGACTGGGCTCTGGCTCTGTTCGGCCTTTGGGTGTGTGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp GAGCTGAGCAGTTGCAGAGGCCATGGCCACATGTGGGGCAGACTCTaGAGCCCAGAGAGACAGCAGGGGCCACCCAAGGTTACACAGCCA +
Preference number: 1 (lower is better)
Translates to: ELSSCRGHGHMWGRL*SPERQQGPPKVTQP
Trigger: TGGCTGTGTAACCTTGGGTGGCCCCTGCTGTCTCTCTGGGCTGCAGAGTCTGCCCCACATGTGGCCATGGCCTCTGCAACTGCTCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp AGCTCAGCCCCACATCTGCCTCCATGCTGTTCCCAACAGCTGGGCTaGGCGGGCAGCGGCAGTGGGAATCTGCCATCTCGAATGCATCCT +
Preference number: 1 (lower is better)
Translates to: SSAPHLPPCCSQQLG*AGSGSGNLPSRMHP
Trigger: AGGATGCATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGCATGGAGGCAGATGTGGGGCTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp GCTGTTCCCAACAGCTGGGCTGAGCGGGCAGCGGCAGTGGGAATCTaGCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTC +
Preference number: 1 (lower is better)
Translates to: AVPNSWAERAAAVGI*HLECILRPLVSWAV
Trigger: GACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp GGAGGCCAGGACCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTaGTTGATTGCCTCCAGAGCCGAGGGGCTCGCTCCCTTTCATAGC +
Preference number: 1 (lower is better)
Translates to: GGQDQGLLDSWLFYV*LIASRAEGLAPFHS
Trigger: GCTATGAAAGGGAGCGAGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGGTCCTGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp CCTCCAGAGCCGAGGGGCTCGCTCCCTTTCATAGCCGGCTGGCTCTaGAGGTCAAACATCACCCACAAGCCGATTGAAGCCTCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: PPEPRGSLPFIAGWL*RSNITHKPIEASLS
Trigger: GGAGAGAGAGGCTTCAATCGGCTTGTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTATGAAAGGGAGCGAGCCCCTCGGCTCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp AGCTGGGCTGAGCGGGCAGCGGCAGTGGGAATCTGCCATCTCGAATaGATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCA +
Preference number: 1 (lower is better)
Translates to: SWAERAAAVGICHLE*ILRPLVSWAVPVFP
Trigger: TGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCTCAGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp GCCTCCATGCTGTTCCCAACAGCTGGGCTGAGCGGGCAGCGGCAGTaGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCT +
Preference number: 1 (lower is better)
Translates to: ASMLFPTAGLSGQRQ*ESAISNASSDPLFP
Trigger: AGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGCATGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp ACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCCTCCTGGACTCTTaGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCGAGGGGCTC +
Preference number: 1 (lower is better)
Translates to: TKYGEGGQDQGLLDS*LFYVCLIASRAEGL
Trigger: GAGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGGTCCTGGCCTCCTTCCCCGTACTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp GAGACAGCAGGGGCCACCCAAGGTTACACAGCCAGTCCTGGTGCATaGCAGTGGGTAACACGTCCTCTTTCACCCCCGCTTAGGCACTCT +
Preference number: 1 (lower is better)
Translates to: ETAGATQGYTASPGA*QWVTRPLSPPLRHS
Trigger: AGAGTGCCTAAGCGGGGGTGAAAGAGGACGTGTTACCCACTGCCATGCACCAGGACTGGCTGTGTAACCTTGGGTGGCCCCTGCTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp TTCTGCCGTAGCTGTCTCCAATCTGATGTCACCCCTGCCTTGGCCTaGAGCCCTCCAGCTACTAGTGCTGCCCAAAGACCCCTCAAGGGG +
Preference number: 1 (lower is better)
Translates to: FCRSCLQSDVTPALA*SPPATSAAQRPLKG
Trigger: CCCCTTGAGGGGTCTTTGGGCAGCACTAGTAGCTGGAGGGCTTCAGGCCAAGGCAGGGGTGACATCAGATTGGAGACAGCTACGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp TTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGAATTGTTaGTTCCTGAGGATGACAGAGGGAGCACCGGGTTCCAAGCCCGCC +
Preference number: 1 (lower is better)
Translates to: FLGCPSLSMMPPTNC*FLRMTEGAPGSKPA
Trigger: GGCGGGCTTGGAACCCGGTGCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp CCACATTCTGCCGTAGCTGTCTCCAATCTGATGTCACCCCTGCCTTaGCCTGAAGCCCTCCAGCTACTAGTGCTGCCCAAAGACCCCTCA +
Preference number: 1 (lower is better)
Translates to: PHSAVAVSNLMSPLP*PEALQLLVLPKDPS
Trigger: TGAGGGGTCTTTGGGCAGCACTAGTAGCTGGAGGGCTTCAGGCCAAGGCAGGGGTGACATCAGATTGGAGACAGCTACGGCAGAATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp CATAGCCGGCTGGCTCTGAAGGTCAAACATCACCCACAAGCCGATTaGAGCCTCTCTCTCCACACCTGCACCTTTTACCCTGATTCCCCA +
Preference number: 1 (lower is better)
Translates to: HSRLALKVKHHPQAD*SLSLHTCTFYPDSP
Trigger: TGGGGAATCAGGGTAAAAGGTGCAGGTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp CCCACCCACTCCCCAATGTCACTGCTACCATCCACCACGGACATTTaGGTCCTGAACTTGTCATGCTCAGGGAAGTCCTGTGATGTGCCT +
Preference number: 1 (lower is better)
Translates to: PTHSPMSLLPSTTDI*VLNLSCSGKSCDVP
Trigger: AGGCACATCACAGGACTTCCCTGAGCATGACAAGTTCAGGACTCAAATGTCCGTGGTGGATGGTAGCAGTGACATTGGGGAGTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp CAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGCAGGCTTaGCAGCCCCACCCACTCCCCAATGTCACTGCTACCATCCACCAC +
Preference number: 1 (lower is better)
Translates to: QRYSRRVFVISSRQA*QPHPLPNVTATIHH
Trigger: GTGGTGGATGGTAGCAGTGACATTGGGGAGTGGGTGGGGCTGTCAAGCCTGCCTAGAGGAGATCACAAATACACGACGAGAATACCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp GCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATaGCACAAACTGTCAGCTGCCCCTTTACAGATGGGCACACTGAGG +
Preference number: 1 (lower is better)
Translates to: AHMHTHTHTQGPLAR*HKLSAAPLQMGTLR
Trigger: CCTCAGTGTGCCCATCTGTAAAGGGGCAGCTGACAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp GCAGGGCCTGGCTGGCTCAAGAACCCCTGGCAGTGGGAATGTTATTaGTATGATGAGGGGGCCATGGTGAAATGTACAACATGTTTGGGG +
Preference number: 1 (lower is better)
Translates to: AGPGWLKNPWQWECY*YDEGAMVKCTTCLG
Trigger: CCCCAAACATGTTGTACATTTCACCATGGCCCCCTCATCATAGCAATAACATTCCCACTGCCAGGGGTTCTTGAGCCAGCCAGGCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTaGCAAGATGCCACAAACTGTCAGCTGCCCCTTTACAGATGGGCA +
Preference number: 1 (lower is better)
Translates to: GDTHTCTHIHTHRDP*QDATNCQLPLYRWA
Trigger: TGCCCATCTGTAAAGGGGCAGCTGACAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 90 bp TCATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTaGTCACCCCCTAACACAGGTGCAGATGTTCACAAACAGCCACAT +
Preference number: 1 (lower is better)
Translates to: SCSGKSCDVPCPSPR*SPPNTGADVHKQPH
Trigger: ATGTGGCTGTTTGTGAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp TTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTaGGAGCTCGCTGGGGTGAGTGAGCCCAGATTTGACTGGAATGGA +
Preference number: 1 (lower is better)
Translates to: LRHLTQRALGSWRGI*ELAGVSEPRFDWNG
Trigger: TCCATTCCAGTCAAATCTGGGCTCACTCACCCCAGCGAGCTCTCAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp ACTCCCCAATGTCACTGCTACCATCCACCACGGACATTTGAGTCCTaGACTTGTCATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTT +
Preference number: 1 (lower is better)
Translates to: TPQCHCYHPPRTFES*TCHAQGSPVMCLVL
Trigger: AAGGACAAGGCACATCACAGGACTTCCCTGAGCATGACAAGTTCAGGACTCAAATGTCCGTGGTGGATGGTAGCAGTGACATTGGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 90 bp GCCCCATCTCGCTTTCCAGCACACAGTAGATGTTCAATAAACTGTTaGTCAGATTCTGAGGTCTGTTTGTGTTTAATCAGACAATATGCA +
Preference number: 1 (lower is better)
Translates to: APSRFPAHSRCSINC*SDSEVCLCLIRQYA
Trigger: TGCATATTGTCTGATTAAACACAAACAGACCTCAGAATCTGATCAACAGTTTATTGAACATCTACTGTGTGCTGGAAAGCGAGATGGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAG +
Preference number: 2 (lower is better)
Translates to: VQGEACGHSGSWTESPCWEGPRP*QFSPTE
Trigger: CTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTC...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTAGCTCCAGGAGGGAGTaGAGGGAGAGGCGTGCGGCC +
Preference number: 2 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSSSRRE*RERRAA
Trigger: GGCCGCACGCCTCTCCCTGCACTCCCTCCTGGAGCT...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCGTGAGCGGAGTAGGCTaGGGCTGGAAAAGGGCACCC +
Preference number: 2 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSVSGVG*GWKRAP
Trigger: GGGTGCCCTTTTCCAGCCTCAGCCTACTCCGCTCAC...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATGTGCAGGGAGAGGCGTaGGGCCACAGCGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHVQGEA*GHSGSW
Trigger: CCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCAGCTCCAGGAGGGAGTaGAGGGAGAGGCGTGCGGCC +
Preference number: 2 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPSSRRE*RERRAA
Trigger: GGCCGCACGCCTCTCCCTGCACTCCCTCCTGGAGCT...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 90 bp GGCCAGGACCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTaGATTGCCTCCAGAGCCGAGGGGCTCGCTCCCTTTCATAGCCGG +
Preference number: 2 (lower is better)
Translates to: GQDQGLLDSWLFYVC*IASRAEGLAPFHSR
Trigger: CCGGCTATGAAAGGGAGCGAGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGGTCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGGTGAGCGGAGTAGGCTaGGGCTGGAAAAGGGCACCC +
Preference number: 2 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGVSGVG*GWKRAP
Trigger: GGGTGCCCTTTTCCAGCCTCAGCCTACTCCGCTCAC...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCGTGCAGGGAGAGGCGTaGGGCCACAGCGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: WESAISNASSDPLFPGLSVQGEA*GHSGSW
Trigger: CCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGCTCCAGGAGGGAGTaGAGGGAGAGGCGTGCGGCC +
Preference number: 2 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHSSRRE*RERRAA
Trigger: GGCCGCACGCCTCTCCCTGCACTCCCTCCTGGAGCT...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTGACATAGACCGGGGGTaGCACAGAAGTGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSDIDRG*HRSGEG
Trigger: TCCTTCCCCACTTCTGTGCCACCCCCGGTCTATGTC...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCGGGGTGGCACAGAAGTaGGGAAGGAGTTCAGTGAGC +
Preference number: 2 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGGVAQK*GRSSVS
Trigger: GCTCACTGAACTCCTTCCCCACTTCTGTGCCACCCC...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCTTGTGCTGCCCAGCCTaGAAGCAGCGGCAGAGGGTC +
Preference number: 2 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPLCCPA*KQRQRV
Trigger: GACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAA...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCGGCAAGGCCTTGTGCTaGCCAGCCTGGAAGCAGCGG +
Preference number: 2 (lower is better)
Translates to: WESAISNASSDPLFPGLSGKALC*PAWKQR
Trigger: CCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCC...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAG +
Preference number: 2 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHEGPRP*QFSPTE
Trigger: CTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTC...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAG +
Preference number: 2 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGEGPRP*QFSPTE
Trigger: CTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTC...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGGCCACAGCGGGAGCTaGACAGAGTCACCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLGHSGS*TESPCW
Trigger: CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCGGCCACAGCGGGAGCTaGACAGAGTCACCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: WESAISNASSDPLFPGLSGHSGS*TESPCW
Trigger: CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCC...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACTTGTGCTGCCCAGCCTaGAAGCAGCGGCAGAGGGTC +
Preference number: 2 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHLCCPA*KQRQRV
Trigger: GACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAA...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCCTGGCAGGGCCTGGCTaGCTCAAGAACCCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFLAGPG*LKNPWQ
Trigger: CTGCCAGGGGTTCTTGAGCCAGCCAGGCCCTGCCAG...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCGCAAGTCTGGGCCTTaGAATTTCGGAGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPRKSGP*NFGAPG
Trigger: GCCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCG...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGTGGACAGAGTCACCGTaGTGGTCTCGCATACCCACC +
Preference number: 2 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGWTESP*WSRIPT
Trigger: GGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCA...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGGGCAAGGCCTTGTGCTaGCCAGCCTGGAAGCAGCGG +
Preference number: 2 (lower is better)
Translates to: TLFPPHELKGADLGRRTGGKALC*PAWKQR
Trigger: CCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCC...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATGGCAAGGCCTTGTGCTaGCCAGCCTGGAAGCAGCGG +
Preference number: 2 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDGKALC*PAWKQR
Trigger: CCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCC...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCGCTCAGCCCCACATCTaGCTCCATGCTGTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPAQPHI*LHAVPN
Trigger: GTTGGGAACAGCATGGAGGCAGATGTGGGGCTGAGC...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGGGCCACAGCGGGAGCTaGACAGAGTCACCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMGHSGS*TESPCW
Trigger: CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCC...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTTGTGCTGCCCAGCCTaGAAGCAGCGGCAGAGGGTC +
Preference number: 2 (lower is better)
Translates to: WESAISNASSDPLFPGLSLCCPA*KQRQRV
Trigger: GACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGAGCGGGCAGCGGCAGTaGGAATCTGCCATCTCGAAT +
Preference number: 2 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGSGQRQ*ESAISN
Trigger: ATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCT...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGCTGTTCCCAACAGCTaGGCTGAGCGGGCAGCGGCA +
Preference number: 2 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDAVPNS*AERAAA
Trigger: TGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 90 bp TTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGAATTGTaGGTTCCTGAGGATGACAGAGGGAGCACCGGGTTCCAAGCCCGC +
Preference number: 2 (lower is better)
Translates to: FPGLSQSFHDASDEL*VPEDDRGSTGFQAR
Trigger: GCGGGCTTGGAACCCGGTGCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGGTGAGCGGAGTAGGCTaGGGCTGGAAAAGGGCACCC +
Preference number: 2 (lower is better)
Translates to: TLFPPHELKGADLGRRTGVSGVG*GWKRAP
Trigger: GGGTGCCCTTTTCCAGCCTCAGCCTACTCCGCTCAC...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACCTGTCTCCCCATGGGTaGAATGGGGGCAAGGAAGTG +
Preference number: 2 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHLSPHG*NGGKEV
Trigger: CACTTCCTTGCCCCCATTTCACCCATGGGGAGACAG...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACTACAGATGGGCACACTaGGGCCCAGGGAGAATCCAC +
Preference number: 2 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHYRWAH*GPGRIH
Trigger: GTGGATTCTCCCTGGGCCTCAGTGTGCCCATCTGTA...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCACCCCTGCCTTGGCCTaGAGCCCTCCAGCTACTAGT +
Preference number: 2 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFTPALA*SPPATS
Trigger: ACTAGTAGCTGGAGGGCTTCAGGCCAAGGCAGGGGT...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATCCAGGCAAGGCCTTGTaGTGCCCAGCCTGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDPGKAL*CPAWKQ
Trigger: CTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGG...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCTATGTCTGCTTGATTaGCTCCAGAGCCGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGLCLLD*LQSRGA
Trigger: AGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAG...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCGGGGTGGCACAGAAGTaGGGAAGGAGTTCAGTGAGC +
Preference number: 2 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSGVAQK*GRSSVS
Trigger: GCTCACTGAACTCCTTCCCCACTTCTGTGCCACCCC...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATGGCCATGGCCACATGTaGGGCAGACTCTGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDGHGHM*GRLCSP
Trigger: TGGGCTGCAGAGTCTGCCCCACATGTGGCCATGGCC...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 90 bp CAGCGGCAGTGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTaGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGAA +
Preference number: 2 (lower is better)
Translates to: QRQWESAISNASSDP*FPGLSQSFHDASDE
Trigger: TTCGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCACTGCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCATAGCCGGCTGGCTCTaGAGGTCAAACATCACCCAC +
Preference number: 2 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSIAGWL*RSNITH
Trigger: GTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTAT...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAATAGCCGGCTGGCTCTaGAGGTCAAACATCACCCAC +
Preference number: 2 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGIAGWL*RSNITH
Trigger: GTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTAT...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTGGACAGAGTCACCGTaGTGGTCTCGCATACCCACC +
Preference number: 2 (lower is better)
Translates to: WESAISNASSDPLFPGLSWTESP*WSRIPT
Trigger: GGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCGACATAGACCGGGGGTaGCACAGAAGTGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFDIDRG*HRSGEG
Trigger: TCCTTCCCCACTTCTGTGCCACCCCCGGTCTATGTC...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCTCAACTGTCTCCCCATaGGTGAAATGGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPSTVSP*VKWGQG
Trigger: TCCTTGCCCCCATTTCACCCATGGGGAGACAGTTGA...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCAGCGGGCAGCGGCAGTaGGAATCTGCCATCTCGAAT +
Preference number: 2 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFSGQRQ*ESAISN
Trigger: ATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCT...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCGCCAGTCCTGGTGCATaGCAGTGGGTAACACGTCCT +
Preference number: 2 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFASPGA*QWVTRP
Trigger: AGGACGTGTTACCCACTGCCATGCACCAGGACTGGC...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 90 bp TTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGAATaGTTGGTTCCTGAGGATGACAGAGGGAGCACCGGGTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LFPGLSQSFHDASDE*LVPEDDRGSTGFQA
Trigger: GGCTTGGAACCCGGTGCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCTGTCTCCCCATGGGTaGAATGGGGGCAAGGAAGTG +
Preference number: 2 (lower is better)
Translates to: TLFPPHELKGADLGRRTGLSPHG*NGGKEV
Trigger: CACTTCCTTGCCCCCATTTCACCCATGGGGAGACAG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAGAGAGCTCGCTGGGGTaGGTGAGCCCAGATTTGACT +
Preference number: 2 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRESSLG*VSPDLT
Trigger: AGTCAAATCTGGGCTCACTCACCCCAGCGAGCTCTC...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCCACATCTGCCTCCATaGTGTTCCCAACAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TLFPPHELKGADLGRRTGPHLPP*CSQQLG
Trigger: GCCCAGCTGTTGGGAACAGCATGGAGGCAGATGTGG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCCCATCGCTCCTCTTTaGAAAGGCTCTTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: WESAISNASSDPLFPGLSPIAPL*KGSLAS
Trigger: GCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGG...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAAGCGGGCAGCGGCAGTaGGAATCTGCCATCTCGAAT +
Preference number: 2 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRSGQRQ*ESAISN
Trigger: ATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCT...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 90 bp TGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTaGGCAAGATGCCACAAACTGTCAGCTGCCCCTTTACAGATGGGC +
Preference number: 2 (lower is better)
Translates to: WRHAHMHTHTHTQGP*ARCHKLSAAPLQMG
Trigger: GCCCATCTGTAAAGGGGCAGCTGACAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCTGGACAGAGTCACCGTaGTGGTCTCGCATACCCACC +
Preference number: 2 (lower is better)
Translates to: SFHDASDELLVPEDDRGSWTESP*WSRIPT
Trigger: GGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCA...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCTGTCTCGGCAGCCTCTaGCTACAGGTGTTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFCLGSL*LQVFPE
Trigger: TTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGACA...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGCGGCAGTGGGAATCTaGCATCTCGAATGCATCCTC +
Preference number: 2 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDAAVGI*HLECIL
Trigger: GAGGATGCATTCGAGATGGCAGATTCCCACTGCCGC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAG +
Preference number: 2 (lower is better)
Translates to: HEEHTQRYSRRVFVISSREGPRP*QFSPTE
Trigger: CTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTC...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGTTTGGAAAGGCTCTTTaGCCAGCTCTCGACATAGAC +
Preference number: 2 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGFGKAL*PALDID
Trigger: GTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAA...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCTTTGGAAAGGCTCTTTaGCCAGCTCTCGACATAGAC +
Preference number: 2 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPFGKAL*PALDID
Trigger: GTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAA...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGCCCATCGCTCCTCTTTaGAAAGGCTCTTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMPIAPL*KGSLAS
Trigger: GCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGG...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATCCCATCGCTCCTCTTTaGAAAGGCTCTTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDPIAPL*KGSLAS
Trigger: GCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGG...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGACCCATCGCTCCTCTTTaGAAAGGCTCTTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRPIAPL*KGSLAS
Trigger: GCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGG...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 90 bp CGCTTAGGCACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTaGGGGAGGAGAACAGGGCCAGGAATTGAAATGCCACGGGACAAA +
Preference number: 2 (lower is better)
Translates to: RLGTLFPPHELKGAD*GRRTGPGIEMPRDK
Trigger: TTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGTGCCTAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGTGTCTCGGCAGCCTCTaGCTACAGGTGTTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: TLFPPHELKGADLGRRTGCLGSL*LQVFPE
Trigger: TTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGACA...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACATCTGCCATCTCGAATaGATCCTCAGACCCCTTGTT +
Preference number: 2 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHICHLE*ILRPLV
Trigger: AACAAGGGGTCTGAGGATGCATTCGAGATGGCAGAT...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGACAGAGTCACCGTGCTaGTCTCGCATACCCACCGCC +
Preference number: 2 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRTESPC*SRIPTA
Trigger: GGCGGTGGGTATGCGAGACCAGCACGGTGACTCTGT...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGATTTGGAAAGGCTCTTTaGCCAGCTCTCGACATAGAC +
Preference number: 2 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGFGKAL*PALDID
Trigger: GTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAA...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACTTTGGAAAGGCTCTTTaGCCAGCTCTCGACATAGAC +
Preference number: 2 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHFGKAL*PALDID
Trigger: GTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAA...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGTCAACTGTCTCCCCATaGGTGAAATGGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: TLFPPHELKGADLGRRTGSTVSP*VKWGQG
Trigger: TCCTTGCCCCCATTTCACCCATGGGGAGACAGTTGA...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATTCAACTGTCTCCCCATaGGTGAAATGGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDSTVSP*VKWGQG
Trigger: TCCTTGCCCCCATTTCACCCATGGGGAGACAGTTGA...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCCCTCCGACGAATTGTTaGTTCCTGAGGATGACAGAG +
Preference number: 2 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFPPTNC*FLRMTE
Trigger: CTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGG...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGAGACCCCTTGTTTCCTaGGCTGTCCCAGTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: TLFPPHELKGADLGRRTGRPLVS*AVPVFP
Trigger: TGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCT...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAGTCCCAGTCTTTCCATaGTGCCTCCGACGAATTGTT +
Preference number: 2 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRVPVFP*CLRRIV
Trigger: AACAATTCGTCGGAGGCATCATGGAAAGACTGGGAC...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGGTCCCAGTCTTTCCATaGTGCCTCCGACGAATTGTT +
Preference number: 2 (lower is better)
Translates to: TLFPPHELKGADLGRRTGVPVFP*CLRRIV
Trigger: AACAATTCGTCGGAGGCATCATGGAAAGACTGGGAC...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGATCTGCCATCTCGAATaGATCCTCAGACCCCTTGTT +
Preference number: 2 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLICHLE*ILRPLV
Trigger: AACAAGGGGTCTGAGGATGCATTCGAGATGGCAGAT...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGGCTCAGCCCCACATCTaGCTCCATGCTGTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRAQPHI*LHAVPN
Trigger: GTTGGGAACAGCATGGAGGCAGATGTGGGGCTGAGC...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCCAAACAGCCACATTCTaGCGTAGCTGTCTCCAATCT +
Preference number: 2 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFQTATF*RSCLQS
Trigger: AGATTGGAGACAGCTACGGCAGAATGTGGCTGTTTG...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGGGGGTGGCACAGAAGTaGGGAAGGAGTTCAGTGAGC +
Preference number: 2 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRGVAQK*GRSSVS
Trigger: GCTCACTGAACTCCTTCCCCACTTCTGTGCCACCCC...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGCCTCCGACGAATTGTTaGTTCCTGAGGATGACAGAG +
Preference number: 2 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMPPTNC*FLRMTE
Trigger: CTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGG...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGGCTCAAGAACCCCTaGCAGTGGGAATGTTATTGC +
Preference number: 2 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRWLKNP*QWECYC
Trigger: GCAATAACATTCCCACTGCCAGGGGTTCTTGAGCCA...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCGGACGGGAGAAGACTTaGGTAATAAAGACGTATGAA +
Preference number: 2 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPGREKT*VIKTYE
Trigger: TTCATACGTCTTTATTACCCAAGTCTTCTCCCGTCC...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTCTGCATAGTCATCTaGAATCTACAAAACACTGTT +
Preference number: 2 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPLCIVI*NLQNTV
Trigger: AACAGTGTTTTGTAGATTTCAGATGACTATGCAGAG...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGGGAAGTCCTGTGATGTaGCTTGTCCTTCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRGSPVM*LVLLPG
Trigger: ACCTGGGAGAAGGACAAGGCACATCACAGGACTTCC...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGACTCCCCAATGTCACTaGTACCATCCACCACGGACA +
Preference number: 2 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRTPQCH*YHPPRT
Trigger: TGTCCGTGGTGGATGGTAGCAGTGACATTGGGGAGT...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGTGGCTCTTCTATGTCTaGTTGATTGCCTCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRWLFYV*LIASRA
Trigger: GGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCA...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCCTGTTGATCAGATTCTaGGGTCTGTTTGTGTTTAAT +
Preference number: 2 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFLLIRF*GLFVFN
Trigger: ATTAAACACAAACAGACCTCAGAATCTGATCAACAG...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR GCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGCAGTGGGAATGTTATTaGTATGATGAGGGGGCCATG +
Preference number: 2 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRQWECY*YDEGAM
Trigger: CATGGCCCCCTCATCATAGCAATAACATTCCCACTG...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR TCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGACTCTGCATAGTCATCTaGAATCTACAAAACACTGTT +
Preference number: 2 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRLCIVI*NLQNTV
Trigger: AACAGTGTTTTGTAGATTTCAGATGACTATGCAGAG...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 72 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTaGTGGTCTCGCATACCCACCGCCCTCTCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: ACGHSGSWTESP*WSRIPTALSGH
Trigger: GTGGCCTGAGAGGGCGGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp TGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTaGTCTCGCATACCCACCGCCCTCTCAGGCCACCCT +
Preference number: 3 (lower is better)
Translates to: CGHSGSWTESPC*SRIPTALSGHP
Trigger: AGGGTGGCCTGAGAGGGCGGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp GGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTaGACAGAGTCACCGTGCTGGTCTCGCATACCCACC +
Preference number: 3 (lower is better)
Translates to: GVQGEACGHSGS*TESPCWSRIPT
Trigger: GGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp CAGAGGGAGCACCGGGTTCCAAGCCCGCCTCCACTCTaGACTGCTCCGTGGCCTTGGGCATGTCACATCCCC +
Preference number: 3 (lower is better)
Translates to: QREHRVPSPPPL*TAPWPWACHIP
Trigger: GGGGATGTGACATGCCCAAGGCCACGGAGCAGTTCAGAGTGGAGGCGGGCTTGGAACCCGGTGCTCCCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp GCAGGCAGGCGGGGCCAGGGGCCCATCGCTCCTCTTTaGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCG +
Preference number: 3 (lower is better)
Translates to: AGRRGQGPIAPL*KGSLASSRHRP
Trigger: CGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCTGCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp ATCATCAGGCCAGGCAAGGCCTTGTGCTGCCCAGCCTaGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: IIRPGKALCCPA*KQRQRVCLGSL
Trigger: GAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGGCCTGATGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp CAGCCCCACATCTGCCTCCATGCTGTTCCCAACAGCTaGGCTGAGCGGGCAGCGGCAGTGGGAATCTGCCAT +
Preference number: 3 (lower is better)
Translates to: QPHICLHAVPNS*AERAAAVGICH
Trigger: ATGGCAGATTCCCACTGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGCATGGAGGCAGATGTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp CCAGAGCTGAGCAGTTGCAGAGGCCATGGCCACATGTaGGGCAGACTCTGCAGCCCAGAGAGACAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: PELSSCRGHGHM*GRLCSPERQQG
Trigger: CCCCTGCTGTCTCTCTGGGCTGCAGAGTCTGCCCCACATGTGGCCATGGCCTCTGCAACTGCTCAGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp GCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTaGCCAGCTCTCGACATAGACCGGGGGTGGCACAGA +
Preference number: 3 (lower is better)
Translates to: ARGPSLLFGKAL*PALDIDRGWHR
Trigger: TCTGTGCCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp GGGTGCCGACTTGGGGAGGAGAACAGGGCCAGGAATTaGAATGCCACGGGACAAAGTACGGGGAAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: GCRLGEENRARN*NATGQSTGKEA
Trigger: GGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTTCTCCTCCCCAAGTCGGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp CACCCAAAGGCCGAACAGAGCCAGAGCCCAGTCTCCTaGTGTCCCAGGGCTAGGCTCACCATGTGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: HPKAEQSQSPVS*CPRARLTMCVL
Trigger: CAGGACACACATGGTGAGCCTAGCCCTGGGACATCAGGAGACTGGGCTCTGGCTCTGTTCGGCCTTTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 72 bp TGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTaGCTACAGGTGTTTCCAGAATGGATGGCAAGGGGC +
Preference number: 3 (lower is better)
Translates to: WKQRQRVCLGSL*LQVFPEWMARG
Trigger: GCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 72 bp AGCAGGGGCCACCCAAGGTTACACAGCCAGTCCTGGTaGATGGCAGTGGGTAACACGTCCTCTTTCACCCCC +
Preference number: 3 (lower is better)
Translates to: SRGHPRLHSQSW*MAVGNTSSFTP
Trigger: GGGGGTGAAAGAGGACGTGTTACCCACTGCCATGCACCAGGACTGGCTGTGTAACCTTGGGTGGCCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp CCCTTCCATGCCACCAAAGAGGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAGAGAGGACCAACAGCA +
Preference number: 3 (lower is better)
Translates to: PFHATKEEGPRP*QFSPTERGPTA
Trigger: TGCTGTTGGTCCTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCATGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp CCGAGGGGCTCGCTCCCTTTCATAGCCGGCTGGCTCTaGAGGTCAAACATCACCCACAAGCCGATTGAAGCC +
Preference number: 3 (lower is better)
Translates to: PRGSLPFIAGWL*RSNITHKPIEA
Trigger: GGCTTCAATCGGCTTGTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTATGAAAGGGAGCGAGCCCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 72 bp AACAGCTGGGCTGAGCGGGCAGCGGCAGTGGGAATCTaGCATCTCGAATGCATCCTCAGACCCCTTGTTTCC +
Preference number: 3 (lower is better)
Translates to: NSWAERAAAVGI*HLECILRPLVS
Trigger: GGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCTCAGCCCAGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp CTGGCAGGGCCTGGCTGGCTCAAGAACCCCTGGCAGTaGGAATGTTATTGCTATGATGAGGGGGCCATGGTG +
Preference number: 3 (lower is better)
Translates to: LAGPGWLKNPWQ*ECYCYDEGAMV
Trigger: CACCATGGCCCCCTCATCATAGCAATAACATTCCCACTGCCAGGGGTTCTTGAGCCAGCCAGGCCCTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCGCATCCTCAGACCCCTaGTTTCCTGGGCTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFASSDP*FPGLSQ
Trigger: CTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGC...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGTCACCCACAAGCCGATaGAAGCCTCTCTCTCCACAC +
Preference number: 3 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGSPTSR*KPLSPH
Trigger: GTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTGA...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp AGCTGTCTCCAATCTGATGTCACCCCTGCCTTGGCCTaGAGCCCTCCAGCTACTAGTGCTGCCCAAAGACCC +
Preference number: 3 (lower is better)
Translates to: SCLQSDVTPALA*SPPATSAAQRP
Trigger: GGGTCTTTGGGCAGCACTAGTAGCTGGAGGGCTTCAGGCCAAGGCAGGGGTGACATCAGATTGGAGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp ACCCAAGGTTACACAGCCAGTCCTGGTGCATGGCAGTaGGTAACACGTCCTCTTTCACCCCCGCTTAGGCAC +
Preference number: 3 (lower is better)
Translates to: TQGYTASPGAWQ*VTRPLSPPLRH
Trigger: GTGCCTAAGCGGGGGTGAAAGAGGACGTGTTACCCACTGCCATGCACCAGGACTGGCTGTGTAACCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp GCCGTAGCTGTCTCCAATCTGATGTCACCCCTGCCTTaGCCTGAAGCCCTCCAGCTACTAGTGCTGCCCAAA +
Preference number: 3 (lower is better)
Translates to: AVAVSNLMSPLP*PEALQLLVLPK
Trigger: TTTGGGCAGCACTAGTAGCTGGAGGGCTTCAGGCCAAGGCAGGGGTGACATCAGATTGGAGACAGCTACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGCTTTGGAAAGGCTCTTaGGCCAGCTCTCGACATAGA +
Preference number: 3 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGLWKGS*ASSRHR
Trigger: TCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAG...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCGCCCATCGCTCCTCTTaGGAAAGGCTCTTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: WESAISNASSDPLFPGLSAHRSS*ERLFGQ
Trigger: CTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGC...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCGCCCATCGCTCCTCTTaGGAAAGGCTCTTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFAHRSS*ERLFGQ
Trigger: CTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGC...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCGAACAGGGCCAGGAATaGAAATGCCACGGGACAAAG +
Preference number: 3 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPEQGQE*KCHGTK
Trigger: CTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTTC...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAGCCCATCGCTCCTCTTaGGAAAGGCTCTTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRAHRSS*ERLFGQ
Trigger: CTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGC...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCTCACCCACAAGCCGATaGAAGCCTCTCTCTCCACAC +
Preference number: 3 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFSPTSR*KPLSPH
Trigger: GTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTGA...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATTTAAAGGGTGCCGACTaGGGGAGGAGAACAGGGCCA +
Preference number: 3 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDLKGAD*GRRTGP
Trigger: TGGCCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAA...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp TCTCGTCGTGTATTTGTGATCTCCTCTAGGCAGGCTTaGCAGCCCCACCCACTCCCCAATGTCACTGCTACC +
Preference number: 3 (lower is better)
Translates to: SRRVFVISSRQA*QPHPLPNVTAT
Trigger: GGTAGCAGTGACATTGGGGAGTGGGTGGGGCTGTCAAGCCTGCCTAGAGGAGATCACAAATACACGACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CCA 72 bp TGTCCCAGTCTTTCCATGATGCCTCCGACGAATTGTTaGTTCCTGAGGATGACAGAGGGAGCACCGGGTTCC +
Preference number: 3 (lower is better)
Translates to: CPSLSMMPPTNC*FLRMTEGAPGS
Trigger: GGAACCCGGTGCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGACTGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCTTTGGAAAGGCTCTTaGGCCAGCTCTCGACATAGA +
Preference number: 3 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSLWKGS*ASSRHR
Trigger: TCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAG...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGATGCCTCCGACGAATaGTTGGTTCCTGAGGATGAC +
Preference number: 3 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLDASDE*LVPEDD
Trigger: GTCATCCTCAGGAACCAACAATTCGTCGGAGGCATC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp CTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTaGGAGCTCGCTGGGGTGAGTGAGCCCAGATTTGAC +
Preference number: 3 (lower is better)
Translates to: LTQRALGSWRGI*ELAGVSEPRFD
Trigger: GTCAAATCTGGGCTCACTCACCCCAGCGAGCTCTCAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 72 bp GGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTaGTCACCCCCTAACACAGGTGCAGATGTTCACAAA +
Preference number: 3 (lower is better)
Translates to: GKSCDVPCPSPR*SPPNTGADVHK
Trigger: TTTGTGAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATGCCTCCGACGAATTGTaGGTTCCTGAGGATGACAGA +
Preference number: 3 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDASDEL*VPEDDR
Trigger: TCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGC...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp CTGGCTCTGAAGGTCAAACATCACCCACAAGCCGATTaGAGCCTCTCTCTCCACACCTGCACCTTTTACCCT +
Preference number: 3 (lower is better)
Translates to: LALKVKHHPQAD*SLSLHTCTFYP
Trigger: AGGGTAAAAGGTGCAGGTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTGATGTTTGACCTTCAGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp TGTCACTGCTACCATCCACCACGGACATTTGAGTCCTaGACTTGTCATGCTCAGGGAAGTCCTGTGATGTGC +
Preference number: 3 (lower is better)
Translates to: CHCYHPPRTFES*TCHAQGSPVMC
Trigger: GCACATCACAGGACTTCCCTGAGCATGACAAGTTCAGGACTCAAATGTCCGTGGTGGATGGTAGCAGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp TCCCCAATGTCACTGCTACCATCCACCACGGACATTTaGGTCCTGAACTTGTCATGCTCAGGGAAGTCCTGT +
Preference number: 3 (lower is better)
Translates to: SPMSLLPSTTDI*VLNLSCSGKSC
Trigger: ACAGGACTTCCCTGAGCATGACAAGTTCAGGACTCAAATGTCCGTGGTGGATGGTAGCAGTGACATTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR GCA 72 bp GGCTGGCTCAAGAACCCCTGGCAGTGGGAATGTTATTaGTATGATGAGGGGGCCATGGTGAAATGTACAACA +
Preference number: 3 (lower is better)
Translates to: GWLKNPWQWECY*YDEGAMVKCTT
Trigger: TGTTGTACATTTCACCATGGCCCCCTCATCATAGCAATAACATTCCCACTGCCAGGGGTTCTTGAGCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGGAACAGGGCCAGGAATaGAAATGCCACGGGACAAAG +
Preference number: 3 (lower is better)
Translates to: HEEHTQRYSRRVFVISSREQGQE*KCHGTK
Trigger: CTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTTC...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR-3UTR CAA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGATCCACCACGGACATTaGAGTCCTGAACTTGTCATG +
Preference number: 3 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRIHHGH*SPELVM
Trigger: CATGACAAGTTCAGGACTCAAATGTCCGTGGTGGAT...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR TCA 72 bp GAATGGACGGGAGAAGACTTGGGTAATAAAGACGTATaGAAGGAAAAGTTGAAATTTCATAGGCAGGCACTG +
Preference number: 3 (lower is better)
Translates to: EWTGEDLGNKDV*KEKLKFHRQAL
Trigger: CAGTGCCTGCCTATGAAATTTCAACTTTTCCTTTCATACGTCTTTATTACCCAAGTCTTCTCCCGTCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGAGCGGGCCCGCCCTCTaGGGGGAGGTGACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWSGPAL*GEVTVS
Trigger: GGACACCGTCACCTCCCCGCAGAGGGCGGGCCCGCT...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACAGCCTCCGAACAGCTTaGGCTCGGCGGCCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYSLRTA*ARRPRG
Trigger: CCCCCGCGGCCGCCGAGCCCAAGCTGTTCGGAGGCT...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACGTGCAGGGAGAGGCGTaGGGCCACAGCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYVQGEA*GHSGSW
Trigger: CCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTGCCGTCGGCCGAGGCTaGCTTGCTGGGGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGAVGRG*LAGGLR
Trigger: TCGCAGACCCCCAGCAAGCCAGCCTCGGCCGACGGC...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTGTCTGGGCCCGCCTGTaGCTAGAGGTTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGVWARL*LEVLPG
Trigger: CCCGGGGAGAACCTCTAGGCACAGGCGGGCCCAGAC...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACAGGCTGCGGCGCCGCTaGCTGGCATCCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYRLRRR*LASLGL
Trigger: CAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCT...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTGTCTGTCCTGTGCTaGGCGAGTGGGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGLSVLC*ASGPAT
Trigger: GGTGGCTGGCCCACTCGCTCAGCACAGGACAGACAG...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCGCCAGCACTGGCACATaGGGTCGTGCAGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPASTGT*GRAGTR
Trigger: CCGAGTCCCTGCACGACCTCATGTGCCAGTGCTGGC...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGGCAAGGCCTTGTGCTaGCCAGCCTGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRGKALC*PAWKQR
Trigger: CCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCC...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTGGCAAGGCCTTGTGCTaGCCAGCCTGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGGKALC*PAWKQR
Trigger: CCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCC...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGCTGTCCCAGAGGACCTaGGAGGCAGCCTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWLSQRT*EAAWGL
Trigger: AAGACCCCAGGCTGCCTCCCAGGTCCTCTGGGACAG...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTGCCGTCGGCCGAGGCTaGCTTGCTGGGGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSAVGRG*LAGGLR
Trigger: TCGCAGACCCCCAGCAAGCCAGCCTCGGCCGACGGC...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACCCTGAGTCTGCGGCTTaGACGTGGGGCACACGGTGG +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYPESAA*TWGTRW
Trigger: CCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGG...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTGGCCACAGCGGGAGCTaGACAGAGTCACCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGGHSGS*TESPCW
Trigger: CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCC...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCGGCCACAGCGGGAGCTaGACAGAGTCACCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPGHSGS*TESPCW
Trigger: CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCC...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTTGTGCTGCCCAGCCTaGAAGCAGCGGCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWLCCPA*KQRQRV
Trigger: GACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAA...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCGCTGTTCCCAACAGCTaGGCTGAGCGGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPAVPNS*AERAAA
Trigger: TGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGC...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTGGCAGGGCCTGGCTaGCTCAAGAACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGLAGPG*LKNPWQ
Trigger: CTGCCAGGGGTTCTTGAGCCAGCCAGGCCCTGCCAG...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCTGGCAGGGCCTGGCTaGCTCAAGAACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRLAGPG*LKNPWQ
Trigger: CTGCCAGGGGTTCTTGAGCCAGCCAGGCCCTGCCAG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACACTGGGTGCGGGAGGTaGTGTAGAAGCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYTGCGR*CRSRRC
Trigger: ACAGCGGCGGCTTCTACATCACCTCCCGCACCCAGT...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACCAGAGCCCAGTCTCCTaGTGTCCCAGGGCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYQSPVS*CPRARL
Trigger: GAGCCTAGCCCTGGGACATCAGGAGACTGGGCTCTG...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGAGCGGGCCCGCCCTCTaGGGGGAGGTGACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGSGPAL*GEVTVS
Trigger: GGACACCGTCACCTCCCCGCAGAGGGCGGGCCCGCT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGATGACCTGGGCCTCCTaGAGGAAGGCCTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWMTWAS*RKASGD
Trigger: GTCTCCAGAGGCCTTCCTGCAGGAGGCCCAGGTCAT...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAGTGCAGGGAGAGGCGTaGGGCCACAGCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTVQGEA*GHSGSW
Trigger: CCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCGGCAAGGCCTTGTGCTaGCCAGCCTGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSGKALC*PAWKQR
Trigger: CCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCC...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCTGTCCCAGAGGACCTaGGAGGCAGCCTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRLSQRT*EAAWGL
Trigger: AAGACCCCAGGCTGCCTCCCAGGTCCTCTGGGACAG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTAGAGGGCCACAAAGGTaGTCACTCCACCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRRGPQR*SLHRPA
Trigger: CGCTGGCCGGTGGAGTGACCACCTTTGTGGCCCTCT...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTACTCCTCAGCCTGGATaGAGTCGGAGGGCGCCACGT +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRTPQPG*SRRAPR
Trigger: ACGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGT...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTTCTCCCAGGCATCCTTaGCCAGGCCCTGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRSPRHP*PGPESA
Trigger: CGCAGACTCAGGGCCTGGCCAAGGATGCCTGGGAGA...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTTTGTGCTGCCCAGCCTaGAAGCAGCGGCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRLCCPA*KQRQRV
Trigger: GACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAA...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGGCCATGGCCACATGTaGGGCAGACTCTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRGHGHM*GRLCSP
Trigger: TGGGCTGCAGAGTCTGCCCCACATGTGGCCATGGCC...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACCGGTGTCCGAGGAGTTaGAGCCTCCGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYRCPRS*SLRTAW
Trigger: CCAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCG...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCCACGTACGCCATGCCTaGGGCGATCTGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPHVRHA*GDLSSH
Trigger: ATGGCTGCTCAGATCGCCTCAGGCATGGCGTACGTG...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCACGTACGCCATGCCTaGGGCGATCTGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRHVRHA*GDLSSH
Trigger: ATGGCTGCTCAGATCGCCTCAGGCATGGCGTACGTG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGCTGTCTCCCCATGGGTaGAATGGGGGCAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWLSPHG*NGGKEV
Trigger: CACTTCCTTGCCCCCATTTCACCCATGGGGAGACAG...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGGAGAGCTCGCTGGGGTaGGTGAGCCCAGATTTGACT +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWESSLG*VSPDLT
Trigger: AGTCAAATCTGGGCTCACTCACCCCAGCGAGCTCTC...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCTACCACTCCTCAGCCTaGATGGAGTCGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSYHSSA*MESEGA
Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTA...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGGGCCATCGGCGTGTTTaGAGTAGTAGGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWGHRRV*SSRPPA
Trigger: AGCTGGTGGCCTACTACTCCAAACACGCCGATGGCC...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCTCTCCCAGGCATCCTTaGCCAGGCCCTGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSSPRHP*PGPESA
Trigger: CGCAGACTCAGGGCCTGGCCAAGGATGCCTGGGAGA...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACTCCTTCCGCCAGCACTaGCACATGAGGTCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYSFRQH*HMRSCR
Trigger: CCTGCACGACCTCATGTGCCAGTGCTGGCGGAAGGA...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTTCTGTTCTCTGTTCTaGGCCGGCGGGCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGFCSLF*AGGRAG
Trigger: GCCCGCCCGCCCGCCGGCCCAGAACAGAGAACAGAA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373578.7
CDS-3UTR TCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCGGTGTCCGAGGAGTTaGAGCCTCCGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSRCPRS*SLRTAW
Trigger: CCAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCG...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCTCCCTCTGTGTTGTTaGCAATCTGGAGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRLPLCC*QSGAAR
Trigger: GCGAGCGGCTCCAGATTGTCAACAACACAGAGGGAG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCCCTCTGTGTTGTTaGCAATCTGGAGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGLPLCC*QSGAAR
Trigger: GCGAGCGGCTCCAGATTGTCAACAACACAGAGGGAG...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATTGGGGCACACGGTGGTaGGGCGGTGGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHWGTRW*GGGTGH
Trigger: ATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCA...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGTGGGGCACACGGTGGTaGGGCGGTGGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREWGTRW*GGGTGH
Trigger: ATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCA...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCCAGGCTTCAGGGTTTTaGTGGCCACCCTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPQASGF*WPPWWY
Trigger: GTACCACCAGGGTGGCCATCAAAACCCTGAAGCCTG...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTGCCTGTCTCCCCCTTaGGAAAGTCCAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWCLSPP*ESPANS
Trigger: GGAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCA...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCCACCCACAAGCCGATTaGAGCCTCTCTCTCCACACC +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPHPQAD*SLSLHT
Trigger: GGTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTG...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTTACAGATGGGCACACTaGGGCCCAGGGAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGYRWAH*GPGRIH
Trigger: GTGGATTCTCCCTGGGCCTCAGTGTGCCCATCTGTA...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCGGCCGAGGCTGGCTTaGTGGGGGTCTGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSRPRLA*WGSARR
Trigger: CCGCCTCGCAGACCCCCAGCAAGCCAGCCTCGGCCG...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCAGCGGGCCCGCCCTCTaGGGGGAGGTGACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSSGPAL*GEVTVS
Trigger: GGACACCGTCACCTCCCCGCAGAGGGCGGGCCCGCT...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCTGGCACATGAGGTCGTaGAGGGACTCGGGACACTCC +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSWHMRS*RDSGHS
Trigger: GGAGTGTCCCGAGTCCCTGCACGACCTCATGTGCCA...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGGTCTGGGCCCGCCTGTaGCTAGAGGTTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGVWARL*LEVLPG
Trigger: CCCGGGGAGAACCTCTAGGCACAGGCGGGCCCAGAC...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGGCGGCAGTGGGAATCTaGCATCTCGAATGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWAAVGI*HLECIL
Trigger: GAGGATGCATTCGAGATGGCAGATTCCCACTGCCGC...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCCACATCTGCCTCCATaGTGTTCCCAACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGPHLPP*CSQQLG
Trigger: GCCCAGCTGTTGGGAACAGCATGGAGGCAGATGTGG...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCCACAGCCAGTCCTGGTaGATGGCAGTGGGTAACACG +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPHSQSW*MAVGNT
Trigger: CGTGTTACCCACTGCCATGCACCAGGACTGGCTGTG...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGGGACCCTTGGCAAGATaGCACAAACTGTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWGPLAR*HKLSAA
Trigger: GGCAGCTGACAGTTTGTGGCATCTTGCCAAGGGTCC...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGAGGCTGCGGCGCCGCTaGCTGGCATCCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRERLRRR*LASLGL
Trigger: CAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCT...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGAGCCTCCGAACAGCTTaGGCTCGGCGGCCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVSLRTA*ARRPRG
Trigger: CCCCCGCGGCCGCCGAGCCCAAGCTGTTCGGAGGCT...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCACGGTGGTGAGGCGGTaGCACAGGCCATCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGTVVRR*HRPSAC
Trigger: ACACGCCGATGGCCTGTGCCACCGCCTCACCACCGT...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTTCGCCAAAGCAGCCCTaGCCCAGCTTGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSSPKQP*PSLTSS
Trigger: GCTGGAGGTCAAGCTGGGCCAGGGCTGCTTTGGCGA...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTGCAGGAAGGCCTCTaGAGACATCGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGLQEGL*RHRARL
Trigger: AAGCCTGGCACGATGTCTCCAGAGGCCTTCCTGCAG...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACGGGGTGGCACAGAAGTaGGGAAGGAGTTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYGVAQK*GRSSVS
Trigger: GCTCACTGAACTCCTTCCCCACTTCTGTGCCACCCC...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACAGCGGGCAGCGGCAGTaGGAATCTGCCATCTCGAAT +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYSGQRQ*ESAISN
Trigger: ATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCT...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTAGCGGGCAGCGGCAGTaGGAATCTGCCATCTCGAAT +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRSGQRQ*ESAISN
Trigger: ATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCT...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTGCCAGTCCTGGTGCATaGCAGTGGGTAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGASPGA*QWVTRP
Trigger: AGGACGTGTTACCCACTGCCATGCACCAGGACTGGC...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCCAGTCCTGGTGCATaGCAGTGGGTAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRASPGA*QWVTRP
Trigger: AGGACGTGTTACCCACTGCCATGCACCAGGACTGGC...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCAGTTGCAGAGGCCATaGCCACATGTGGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRQLQRP*PHVGQT
Trigger: AGTCTGCCCCACATGTGGCCATGGCCTCTGCAACTG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCAGTTGCAGAGGCCATaGCCACATGTGGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGQLQRP*PHVGQT
Trigger: AGTCTGCCCCACATGTGGCCATGGCCTCTGCAACTG...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 72 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTaGGCCAGCTCTCGACATAGACCGGGGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGS*ASSRHRPGVAQ
Trigger: CTGTGCCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCCCTCTGTGTTGTTaGCAATCTGGAGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSLPLCC*QSGAAR
Trigger: GCGAGCGGCTCCAGATTGTCAACAACACAGAGGGAG...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCACTGGGTGCGGGAGGTaGTGTAGAAGCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGTGCGR*CRSRRC
Trigger: ACAGCGGCGGCTTCTACATCACCTCCCGCACCCAGT...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTTGCCTGTCTCCCCCTTaGGAAAGTCCAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGCLSPP*ESPANS
Trigger: GGAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCA...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCGTGAGCGGAGTAGGCTaGGGCTGGAAAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGVSGVG*GWKRAP
Trigger: GGGTGCCCTTTTCCAGCCTCAGCCTACTCCGCTCAC...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTTCTATGTCTGCTTaGTTGCCTCCAGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWSSMSA*LPPEPR
Trigger: CCTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGA...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCCAGAGCCCAGTCTCCTaGTGTCCCAGGGCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGQSPVS*CPRARL
Trigger: GAGCCTAGCCCTGGGACATCAGGAGACTGGGCTCTG...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCAGTTGGAGAGGGATTTaGGAGCTCGCTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPSWRGI*ELAGVS
Trigger: ACTCACCCCAGCGAGCTCTCAAATCCCTCTCCAACT...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCGTCTGGGCCCGCCTGTaGCTAGAGGTTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPVWARL*LEVLPG
Trigger: CCCGGGGAGAACCTCTAGGCACAGGCGGGCCCAGAC...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGAGCTCCAGGAGGGAGTaGAGGGAGAGGCGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWSSRRE*RERRAA
Trigger: GGCCGCACGCCTCTCCCTGCACTCCCTCCTGGAGCT...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGAGCTCCAGGAGGGAGTaGAGGGAGAGGCGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGSSRRE*RERRAA
Trigger: GGCCGCACGCCTCTCCCTGCACTCCCTCCTGGAGCT...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCGGCAGTGGGAATCTaGCATCTCGAATGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRAAVGI*HLECIL
Trigger: GAGGATGCATTCGAGATGGCAGATTCCCACTGCCGC...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCTTCATAGGCAGGCACTaGTTGGCCTCCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPFIGRH*LASFPT
Trigger: AGTGGGGAAGGAGGCCAAGCAGTGCCTGCCTATGAA...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGAGGCTGCGGCGCCGCTaGCTGGCATCCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWRLRRR*LASLGL
Trigger: CAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCT...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGCCGTCGGCCGAGGCTaGCTTGCTGGGGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVAVGRG*LAGGLR
Trigger: TCGCAGACCCCCAGCAAGCCAGCCTCGGCCGACGGC...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGCCTGAGTCTGCGGCTTaGACGTGGGGCACACGGTGG +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGPESAA*TWGTRW
Trigger: CCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGG...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCCTGAGTCTGCGGCTTaGACGTGGGGCACACGGTGG +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREPESAA*TWGTRW
Trigger: CCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATCTCCCAGGCATCCTTaGCCAGGCCCTGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTSPRHP*PGPESA
Trigger: CGCAGACTCAGGGCCTGGCCAAGGATGCCTGGGAGA...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATCGCCAAAGCAGCCCTaGCCCAGCTTGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTSPKQP*PSLTSS
Trigger: GCTGGAGGTCAAGCTGGGCCAGGGCTGCTTTGGCGA...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTGCAGGAAGGCCTCTaGAGACATCGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSLQEGL*RHRARL
Trigger: AAGCCTGGCACGATGTCTCCAGAGGCCTTCCTGCAG...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTTCCTTCCGCCAGCACTaGCACATGAGGTCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSSFRQH*HMRSCR
Trigger: CCTGCACGACCTCATGTGCCAGTGCTGGCGGAAGGA...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGGTTCTCCCCGGGCTaGTACTGGGGCTCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHRFSPG*YWGSVD
Trigger: GTCCACCGAGCCCCAGTACCAGCCCGGGGAGAACCT...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGAGGTTCTCCCCGGGCTaGTACTGGGGCTCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGRFSPG*YWGSVD
Trigger: GTCCACCGAGCCCCAGTACCAGCCCGGGGAGAACCT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTEGPRP*QFSPTE
Trigger: CTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTC...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTACAGAGTCACCGTGCTaGTCTCGCATACCCACCGCC +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSTESPC*SRIPTA
Trigger: GGCGGTGGGTATGCGAGACCAGCACGGTGACTCTGT...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCAACTGTCTCCCCATaGGTGAAATGGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWSTVSP*VKWGQG
Trigger: TCCTTGCCCCCATTTCACCCATGGGGAGACAGTTGA...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACAGGACCAGGGCCTCCTaGACTCTTGGCTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYRTRAS*TLGSSM
Trigger: CATAGAAGAGCCAAGAGTCCAGGAGGCCCTGGTCCT...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCGGCCATGGCCACATGTaGGGCAGACTCTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGGHGHM*GRLCSP
Trigger: TGGGCTGCAGAGTCTGCCCCACATGTGGCCATGGCC...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGACTGGGTGCGGGAGGTaGTGTAGAAGCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRETGCGR*CRSRRC
Trigger: ACAGCGGCGGCTTCTACATCACCTCCCGCACCCAGT...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATGCCATGTCCACCAGCTaGGGCAGCCGCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHAMSTS*GSRRYL
Trigger: CAAGTACCTGCGGCTGCCTCAGCTGGTGGACATGGC...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGACTCATTGTCTTCAATaGGCCGAGCCAGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWTHCLQ*AEPAQS
Trigger: ACTTTGGGCTGGCTCGGCTCATTGAAGACAATGAGT...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGGTCCCAGTCTTTCCATaGTGCCTCCGACGAATTGTT +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWVPVFP*CLRRIV
Trigger: AACAATTCGTCGGAGGCATCATGGAAAGACTGGGAC...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCAGAGCCCAGTCTCCTaGTGTCCCAGGGCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREQSPVS*CPRARL
Trigger: GAGCCTAGCCCTGGGACATCAGGAGACTGGGCTCTG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCCACCACGGACATTTaGGTCCTGAACTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWSTTDI*VLNLSC
Trigger: GCATGACAAGTTCAGGACTCAAATGTCCGTGGTGGA...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACTGGCATCCTTGGGCTTaGTCTTGTTGCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYWHPWA*SCCYPW
Trigger: CCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCA...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCGCCGCTGTCCAGCTTaGGGATCTTGTAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSRRCPA*GSCSAS
Trigger: TGAAGCACTACAAGATCCGCAAGCTGGACAGCGGCG...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAATGACCTGGGCCTCCTaGAGGAAGGCCTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTMTWAS*RKASGD
Trigger: GTCTCCAGAGGCCTTCCTGCAGGAGGCCCAGGTCAT...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTTGGACAGAGTCACCGTaGTGGTCTCGCATACCCACC +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSWTESP*WSRIPT
Trigger: GGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCA...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTTGTCTCGGCAGCCTCTaGCTACAGGTGTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRCLGSL*LQVFPE
Trigger: TTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGACA...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGTGCGGCGCCGCTGGCTaGCATCCTTGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTCGAAG*HPWACS
Trigger: AGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCA...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCCGTCGGCCGAGGCTaGCTTGCTGGGGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLAVGRG*LAGGLR
Trigger: TCGCAGACCCCCAGCAAGCCAGCCTCGGCCGACGGC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGAGGGCCACAAAGGTaGTCACTCCACCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHRGPQR*SLHRPA
Trigger: CGCTGGCCGGTGGAGTGACCACCTTTGTGGCCCTCT...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGACTCCTCAGCCTGGATaGAGTCGGAGGGCGCCACGT +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRETPQPG*SRRAPR
Trigger: ACGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGT...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTACCACTCCTCAGCCTaGATGGAGTCGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGYHSSA*MESEGA
Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTA...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTCGCCAAAGCAGCCCTaGCCCAGCTTGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGSPKQP*PSLTSS
Trigger: GCTGGAGGTCAAGCTGGGCCAGGGCTGCTTTGGCGA...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGGGCCACAGCGGGAGCTaGACAGAGTCACCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTGHSGS*TESPCW
Trigger: CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCC...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACTCAACTGTCTCCCCATaGGTGAAATGGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYSTVSP*VKWGQG
Trigger: TCCTTGCCCCCATTTCACCCATGGGGAGACAGTTGA...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTAGACCCCTTGTTTCCTaGGCTGTCCCAGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRRPLVS*AVPVFP
Trigger: TGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCT...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCAGGACCAGGGCCTCCTaGACTCTTGGCTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSRTRAS*TLGSSM
Trigger: CATAGAAGAGCCAAGAGTCCAGGAGGCCCTGGTCCT...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGACACACAGGGACCCTTaGCAAGATGCCACAAACTGT +
Preference number: 4 (lower is better)
Translates to: VQGEACGHSGSWTESPCWTHRDP*QDATNC
Trigger: ACAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGT...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGCTGGCAGGGCCTGGCTaGCTCAAGAACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTLAGPG*LKNPWQ
Trigger: CTGCCAGGGGTTCTTGAGCCAGCCAGGCCCTGCCAG...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACTGTCTGTCCTGTGCTaGGCGAGTGGGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGLSVLC*ASGPAT
Trigger: GGTGGCTGGCCCACTCGCTCAGCACAGGACAGACAG...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCGTCGAAGTCAGACACTaGGAGGCAGTAGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSVEVRH*EAVGTF
Trigger: AAAGGTGCCTACTGCCTCTCAGTGTCTGACTTCGAC...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGTGGGGCACACGGTGGTaGGGCGGTGGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLWGTRW*GGGTGH
Trigger: ATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCA...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCACGTACGCCATGCCTaGGGCGATCTGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREHVRHA*GDLSSH
Trigger: ATGGCTGCTCAGATCGCCTCAGGCATGGCGTACGTG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACACTCATTGTCTTCAATaGGCCGAGCCAGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYTHCLQ*AEPAQS
Trigger: ACTTTGGGCTGGCTCGGCTCATTGAAGACAATGAGT...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGCCCGTCCCTTTGTGGTaGGCTCAGTCAGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGPVPLW*AQSAGS
Trigger: GGATCCTGCTGACTGAGCTCACCACAAAGGGACGGG...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGGTGAGCGGAGTAGGCTaGGGCTGGAAAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWVSGVG*GWKRAP
Trigger: GGGTGCCCTTTTCCAGCCTCAGCCTACTCCGCTCAC...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCGTGAGCGGAGTAGGCTaGGGCTGGAAAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPVSGVG*GWKRAP
Trigger: GGGTGCCCTTTTCCAGCCTCAGCCTACTCCGCTCAC...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTGTCCCAGTCTTTCCATaGTGCCTCCGACGAATTGTT +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGVPVFP*CLRRIV
Trigger: AACAATTCGTCGGAGGCATCATGGAAAGACTGGGAC...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTATAGCCGGCTGGCTCTaGAGGTCAAACATCACCCAC +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSIAGWL*RSNITH
Trigger: GTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTAT...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCGAGAGCTCGCTGGGGTaGGTGAGCCCAGATTTGACT +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGESSLG*VSPDLT
Trigger: AGTCAAATCTGGGCTCACTCACCCCAGCGAGCTCTC...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTAGTTGGAGAGGGATTTaGGAGCTCGCTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSSWRGI*ELAGVS
Trigger: ACTCACCCCAGCGAGCTCTCAAATCCCTCTCCAACT...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCGGACATTTGAGTCCTaGACTTGTCATGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRRTFES*TCHAQG
Trigger: TCCCTGAGCATGACAAGTTCAGGACTCAAATGTCCG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCTCGTCGTGTATTTGTaGTCTCCTCTAGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRLVVYL*SPLGRL
Trigger: AAGCCTGCCTAGAGGAGATCACAAATACACGACGAG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGTCGTGGCCAGAGTTaGCTCCGGTGCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGCRGQS*LRCTGV
Trigger: CACACCTGTGCACCGGAGTCAACTCTGGCCACGACA...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGTGTCGTGGCCAGAGTTaGCTCCGGTGCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRECRGQS*LRCTGV
Trigger: CACACCTGTGCACCGGAGTCAACTCTGGCCACGACA...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATATGACCTGGGCCTCCTaGAGGAAGGCCTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHMTWAS*RKASGD
Trigger: GTCTCCAGAGGCCTTCCTGCAGGAGGCCCAGGTCAT...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTACCACAGCATACAACTaGACCAGCTTCTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGTTAYN*TSFSCL
Trigger: GAGGCATGAGAAGCTGGTGCAGTTGTATGCTGTGGT...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCACCACAGCATACAACTaGACCAGCTTCTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPTTAYN*TSFSCL
Trigger: GAGGCATGAGAAGCTGGTGCAGTTGTATGCTGTGGT...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCACATGAGGTCGTaGAGGGACTCGGGACACTCC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGWHMRS*RDSGHS
Trigger: GGAGTGTCCCGAGTCCCTGCACGACCTCATGTGCCA...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTGGACAGAGTCACCGTaGTGGTCTCGCATACCCACC +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGWTESP*WSRIPT
Trigger: GGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGGTGCAGGGAGAGGCGTaGGGCCACAGCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGVQGEA*GHSGSW
Trigger: CCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCAGCTCCAGGAGGGAGTaGAGGGAGAGGCGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFSSRRE*RERRAA
Trigger: GGCCGCACGCCTCTCCCTGCACTCCCTCCTGGAGCT...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGCCAGGCAAGGCCTTGTaGTGCCCAGCCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWPGKAL*CPAWKQ
Trigger: CTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGG...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTTGGCTCTTCTATGTCTaGTTGATTGCCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RECRERRAATAGAGQSHRWLFYV*LIASRA
Trigger: GGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCA...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGATGCGGCGCCGCTGGCTaGCATCCTTGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGCGAAG*HPWACS
Trigger: AGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCA...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCAGGCTGCGGCGCCGCTaGCTGGCATCCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFRLRRR*LASLGL
Trigger: CAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCT...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGTACCACTCCTCAGCCTaGATGGAGTCGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGYHSSA*MESEGA
Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTA...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGTACCACTCCTCAGCCTaGATGGAGTCGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTYHSSA*MESEGA
Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTA...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCTGAGTCTGCGGCTTaGACGTGGGGCACACGGTGG +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGPESAA*TWGTRW
Trigger: CCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGG...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGTCTCCCAGGCATCCTTaGCCAGGCCCTGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTSPRHP*PGPESA
Trigger: CGCAGACTCAGGGCCTGGCCAAGGATGCCTGGGAGA...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCAGGTTCTCCCCGGGCTaGTACTGGGGCTCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSRFSPG*YWGSVD
Trigger: GTCCACCGAGCCCCAGTACCAGCCCGGGGAGAACCT...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGACAGAGTCACCGTGCTaGTCTCGCATACCCACCGCC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGTESPC*SRIPTA
Trigger: GGCGGTGGGTATGCGAGACCAGCACGGTGACTCTGT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAGACATAGACCGGGGGTaGCACAGAAGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTDIDRG*HRSGEG
Trigger: TCCTTCCCCACTTCTGTGCCACCCCCGGTCTATGTC...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCCCTCCGACGAATTGTTaGTTCCTGAGGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPPPTNC*FLRMTE
Trigger: CTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGG...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCGGCCTCCTGGACTCTTaGCTCTTCTATGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSGLLDS*LFYVCL
Trigger: CAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCC...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCCTGGTGCATGGCAGTaGGTAACACGTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSPGAWQ*VTRPLS
Trigger: TGAAAGAGGACGTGTTACCCACTGCCATGCACCAGG...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGCGCAAGTCTGGGCCTTaGAATTTCGGAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGRKSGP*NFGAPG
Trigger: GCCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCG...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGCTGTCTGTCCTGTGCTaGGCGAGTGGGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLLSVLC*ASGPAT
Trigger: GGTGGCTGGCCCACTCGCTCAGCACAGGACAGACAG...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATGTAGTGCTTCACGTTaGGGCCCTTGGCGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTCSASR*GPWRCR
Trigger: TCGACAACGCCAAGGGCCTCAACGTGAAGCACTACA...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGGGGCACACGGTGGTaGGGCGGTGGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRWGTRW*GGGTGH
Trigger: ATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCA...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAGCCATGTCCACCAGCTaGGGCAGCCGCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGAMSTS*GSRRYL
Trigger: CAAGTACCTGCGGCTGCCTCAGCTGGTGGACATGGC...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCCCGTCCCTTTGTGGTaGGCTCAGTCAGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPPVPLW*AQSAGS
Trigger: GGATCCTGCTGACTGAGCTCACCACAAAGGGACGGG...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCGCCAGCACTGGCACATaGGGTCGTGCAGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSASTGT*GRAGTR
Trigger: CCGAGTCCCTGCACGACCTCATGTGCCAGTGCTGGC...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCGCCAGCACTGGCACATaGGGTCGTGCAGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFASTGT*GRAGTR
Trigger: CCGAGTCCCTGCACGACCTCATGTGCCAGTGCTGGC...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAATAGCCGGCTGGCTCTaGAGGTCAAACATCACCCAC +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTIAGWL*RSNITH
Trigger: GTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTAT...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGACCCCTGCCTTGGCCTaGAGCCCTCCAGCTACTAGT +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTTPALA*SPPATS
Trigger: ACTAGTAGCTGGAGGGCTTCAGGCCAAGGCAGGGGT...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCCGCCGCTGTCCAGCTTaGGGATCTTGTAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGRRCPA*GSCSAS
Trigger: TGAAGCACTACAAGATCCGCAAGCTGGACAGCGGCG...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCAAAGTCCGCCACTTTaGACACCAGGTTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSQSPPL*TPGSLP
Trigger: TGGGAGAGAACCTGGTGTGCAAAGTGGCGGACTTTG...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAGTCTGGGCCCGCCTGTaGCTAGAGGTTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRVWARL*LEVLPG
Trigger: CCCGGGGAGAACCTCTAGGCACAGGCGGGCCCAGAC...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGCAAGGCCTTGTaGTGCCCAGCCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGPGKAL*CPAWKQ
Trigger: CTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGG...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCCAGGCAAGGCCTTGTaGTGCCCAGCCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSPGKAL*CPAWKQ
Trigger: CTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGG...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACATCTGCCATCTCGAATaGATCCTCAGACCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYICHLE*ILRPLV
Trigger: AACAAGGGGTCTGAGGATGCATTCGAGATGGCAGAT...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGGCTCAGCCCCACATCTaGCTCCATGCTGTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGAQPHI*LHAVPN
Trigger: GTTGGGAACAGCATGGAGGCAGATGTGGGGCTGAGC...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGCACAGCCAGTCCTGGTaGATGGCAGTGGGTAACACG +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGHSQSW*MAVGNT
Trigger: CGTGTTACCCACTGCCATGCACCAGGACTGGCTGTG...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTTCATAGGCAGGCACTaGTTGGCCTCCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGFIGRH*LASFPT
Trigger: AGTGGGGAAGGAGGCCAAGCAGTGCCTGCCTATGAA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCAAACAGCCACATTCTaGCGTAGCTGTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGQTATF*RSCLQS
Trigger: AGATTGGAGACAGCTACGGCAGAATGTGGCTGTTTG...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCTCGCCAAAGCAGCCCTaGCCCAGCTTGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSSPKQP*PSLTSS
Trigger: GCTGGAGGTCAAGCTGGGCCAGGGCTGCTTTGGCGA...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSEGPRP*QFSPTE
Trigger: CTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTC...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVEGPRP*QFSPTE
Trigger: CTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTC...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCACAGAGTCACCGTGCTaGTCTCGCATACCCACCGCC +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPTESPC*SRIPTA
Trigger: GGCGGTGGGTATGCGAGACCAGCACGGTGACTCTGT...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGGGGGTGGCACAGAAGTaGGGAAGGAGTTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGGVAQK*GRSSVS
Trigger: GCTCACTGAACTCCTTCCCCACTTCTGTGCCACCCC...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGGACATAGACCGGGGGTaGCACAGAAGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREDIDRG*HRSGEG
Trigger: TCCTTCCCCACTTCTGTGCCACCCCCGGTCTATGTC...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGATTGTGCTGCCCAGCCTaGAAGCAGCGGCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGLCCPA*KQRQRV
Trigger: GACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAA...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCGCTGTTCCCAACAGCTaGGCTGAGCGGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFAVPNS*AERAAA
Trigger: TGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGC...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCCTGGTGCATGGCAGTaGGTAACACGTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSPGAWQ*VTRPLS
Trigger: TGAAAGAGGACGTGTTACCCACTGCCATGCACCAGG...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCGGCCATGGCCACATGTaGGGCAGACTCTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSGHGHM*GRLCSP
Trigger: TGGGCTGCAGAGTCTGCCCCACATGTGGCCATGGCC...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATCAGTTGCAGAGGCCATaGCCACATGTGGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHQLQRP*PHVGQT
Trigger: AGTCTGCCCCACATGTGGCCATGGCCTCTGCAACTG...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGCGCAAGTCTGGGCCTTaGAATTTCGGAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTRKSGP*NFGAPG
Trigger: GCCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCG...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGATGTCACCCCTGCCTTaGCCTGAAGCCCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREMSPLP*PEALQL
Trigger: TAGCTGGAGGGCTTCAGGCCAAGGCAGGGGTGACAT...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGCTGTCTGTCCTGTGCTaGGCGAGTGGGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMLSVLC*ASGPAT
Trigger: GGTGGCTGGCCCACTCGCTCAGCACAGGACAGACAG...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTCGGGTTCTCTGCATTaGGCAGTAACCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGSGSLH*AVTALT
Trigger: AGTCAGAGCGGTTACTGCTCAATGCAGAGAACCCGA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATCGGGTTCTCTGCATTaGGCAGTAACCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTSGSLH*AVTALT
Trigger: AGTCAGAGCGGTTACTGCTCAATGCAGAGAACCCGA...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAGTCGAAGTCAGACACTaGGAGGCAGTAGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTVEVRH*EAVGTF
Trigger: AAAGGTGCCTACTGCCTCTCAGTGTCTGACTTCGAC...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCACTGGGTGCGGGAGGTaGTGTAGAAGCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFTGCGR*CRSRRC
Trigger: ACAGCGGCGGCTTCTACATCACCTCCCGCACCCAGT...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCAGGCTTCAGGGTTTTaGTGGCCACCCTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGQASGF*WPPWWY
Trigger: GTACCACCAGGGTGGCCATCAAAACCCTGAAGCCTG...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCAGGCTTCAGGGTTTTaGTGGCCACCCTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPQASGF*WPPWWY
Trigger: GTACCACCAGGGTGGCCATCAAAACCCTGAAGCCTG...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACCCCGTCCCTTTGTGGTaGGCTCAGTCAGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHPVPLW*AQSAGS
Trigger: GGATCCTGCTGACTGAGCTCACCACAAAGGGACGGG...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGGCCAGCACTGGCACATaGGGTCGTGCAGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMASTGT*GRAGTR
Trigger: CCGAGTCCCTGCACGACCTCATGTGCCAGTGCTGGC...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCTGTCTCCCCATGGGTaGAATGGGGGCAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGLSPHG*NGGKEV
Trigger: CACTTCCTTGCCCCCATTTCACCCATGGGGAGACAG...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGCTGTCTCCCCATGGGTaGAATGGGGGCAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWLSPHG*NGGKEV
Trigger: CACTTCCTTGCCCCCATTTCACCCATGGGGAGACAG...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCACCCACAAGCCGATTaGAGCCTCTCTCTCCACACC +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPHPQAD*SLSLHT
Trigger: GGTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTG...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCATGAGGGGGCCATGGTaGAATGTACAACATGTTTGG +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSMRGPW*NVQHVW
Trigger: CCAAACATGTTGTACATTTCACCATGGCCCCCTCAT...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATCTATGTCTGCTTGATTaGCTCCAGAGCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHLCLLD*LQSRGA
Trigger: AGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAG...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCTATGTCTGCTTGATTaGCTCCAGAGCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRELCLLD*LQSRGA
Trigger: AGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGGGACCCTTGGCAAGATaGCACAAACTGTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGGPLAR*HKLSAA
Trigger: GGCAGCTGACAGTTTGTGGCATCTTGCCAAGGGTCC...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATTTCATAGGCAGGCACTaGTTGGCCTCCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHFIGRH*LASFPT
Trigger: AGTGGGGAAGGAGGCCAAGCAGTGCCTGCCTATGAA...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCGGAAGTCCTGTGATGTaGCTTGTCCTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGGSPVM*LVLLPG
Trigger: ACCTGGGAGAAGGACAAGGCACATCACAGGACTTCC...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAACCTTCAAGACTGTGTaGTTCGGTGGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTTFKTV*FGGGEG
Trigger: TCCTTCCCCACCACCGAAGCACACAGTCTTGAAGGT...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGTGCGGCGCCGCTGGCTaGCATCCTTGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGCGAAG*HPWACS
Trigger: AGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCA...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATTGCGGCGCCGCTGGCTaGCATCCTTGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDCGAAG*HPWACS
Trigger: AGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCA...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCAGAGGGCCACAAAGGTaGTCACTCCACCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSRGPQR*SLHRPA
Trigger: CGCTGGCCGGTGGAGTGACCACCTTTGTGGCCCTCT...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCGGCCATCGGCGTGTTTaGAGTAGTAGGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPGHRRV*SSRPPA
Trigger: AGCTGGTGGCCTACTACTCCAAACACGCCGATGGCC...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATACGGTGGTGAGGCGGTaGCACAGGCCATCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDTVVRR*HRPSAC
Trigger: ACACGCCGATGGCCTGTGCCACCGCCTCACCACCGT...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATACGGTGGTGAGGCGGTaGCACAGGCCATCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDTVVRR*HRPSAC
Trigger: ACACGCCGATGGCCTGTGCCACCGCCTCACCACCGT...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCTGCAGGAAGGCCTCTaGAGACATCGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGLQEGL*RHRARL
Trigger: AAGCCTGGCACGATGTCTCCAGAGGCCTTCCTGCAG...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATAGGTTCTCCCCGGGCTaGTACTGGGGCTCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDRFSPG*YWGSVD
Trigger: GTCCACCGAGCCCCAGTACCAGCCCGGGGAGAACCT...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGCCCATCGCTCCTCTTTaGAAAGGCTCTTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGPIAPL*KGSLAS
Trigger: GCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGG...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCCCATCGCTCCTCTTTaGAAAGGCTCTTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREPIAPL*KGSLAS
Trigger: GCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAGCTGTTCCCAACAGCTaGGCTGAGCGGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRAVPNS*AERAAA
Trigger: TGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGC...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGGCCATGGCCACATGTaGGGCAGACTCTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLGHGHM*GRLCSP
Trigger: TGGGCTGCAGAGTCTGCCCCACATGTGGCCATGGCC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATCTGGCAGGGCCTGGCTaGCTCAAGAACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDLAGPG*LKNPWQ
Trigger: CTGCCAGGGGTTCTTGAGCCAGCCAGGCCCTGCCAG...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGATGTCACCCCTGCCTTaGCCTGAAGCCCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGMSPLP*PEALQL
Trigger: TAGCTGGAGGGCTTCAGGCCAAGGCAGGGGTGACAT...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGCGGTGTCCGAGGAGTTaGAGCCTCCGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLRCPRS*SLRTAW
Trigger: CCAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCG...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATTCGGGTTCTCTGCATTaGGCAGTAACCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHSGSLH*AVTALT
Trigger: AGTCAGAGCGGTTACTGCTCAATGCAGAGAACCCGA...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTGTAAATGGGCTCCTCTaGAACCACAGCATACAACTG +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSVNGLL*NHSIQL
Trigger: CAGTTGTATGCTGTGGTTTCAGAGGAGCCCATTTAC...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGTGCCTGTCTCCCCCTTaGGAAAGTCCAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTCLSPP*ESPANS
Trigger: GGAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCA...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATGCCATGTCCACCAGCTaGGGCAGCCGCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDAMSTS*GSRRYL
Trigger: CAAGTACCTGCGGCTGCCTCAGCTGGTGGACATGGC...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGGCCATGTCCACCAGCTaGGGCAGCCGCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGAMSTS*GSRRYL
Trigger: CAAGTACCTGCGGCTGCCTCAGCTGGTGGACATGGC...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGTGAGCGGAGTAGGCTaGGGCTGGAAAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDVSGVG*GWKRAP
Trigger: GGGTGCCCTTTTCCAGCCTCAGCCTACTCCGCTCAC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGCACCCACAAGCCGATTaGAGCCTCTCTCTCCACACC +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVHPQAD*SLSLHT
Trigger: GGTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTG...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGATAGCCGGCTGGCTCTaGAGGTCAAACATCACCCAC +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWIAGWL*RSNITH
Trigger: GTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTAT...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGACAGAGCCCAGTCTCCTaGTGTCCCAGGGCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRQSPVS*CPRARL
Trigger: GAGCCTAGCCCTGGGACATCAGGAGACTGGGCTCTG...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGTACAGATGGGCACACTaGGGCCCAGGGAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVYRWAH*GPGRIH
Trigger: GTGGATTCTCCCTGGGCCTCAGTGTGCCCATCTGTA...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGATACAGATGGGCACACTaGGGCCCAGGGAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGYRWAH*GPGRIH
Trigger: GTGGATTCTCCCTGGGCCTCAGTGTGCCCATCTGTA...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTCAGGGAAGTCCTGTaGTGTGCCTTGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPLREVL*CALSFS
Trigger: GGAGAAGGACAAGGCACATCACAGGACTTCCCTGAG...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGCTCAGGGAAGTCCTGTaGTGTGCCTTGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTLREVL*CALSFS
Trigger: GGAGAAGGACAAGGCACATCACAGGACTTCCCTGAG...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCCGGACATTTGAGTCCTaGACTTGTCATGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGRTFES*TCHAQG
Trigger: TCCCTGAGCATGACAAGTTCAGGACTCAAATGTCCG...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGTGTCGTGGCCAGAGTTaGCTCCGGTGCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLCRGQS*LRCTGV
Trigger: CACACCTGTGCACCGGAGTCAACTCTGGCCACGACA...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCACCAGTCTCCCTCTCTaGCATCCACCTTCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPTSLPL*HPPSSC
Trigger: ACACGAGGAAGGTGGATGTCAGAGAGGGAGACTGGT...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373558.2
CDS-3UTR GCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGAGCGGGCCCGCCCTCTaGGGGGAGGTGACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLSGPAL*GEVTVS
Trigger: GGACACCGTCACCTCCCCGCAGAGGGCGGGCCCGCT...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGTGGCACATGAGGTCGTaGAGGGACTCGGGACACTCC +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLWHMRS*RDSGHS
Trigger: GGAGTGTCCCGAGTCCCTGCACGACCTCATGTGCCA...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGTGGACAGAGTCACCGTaGTGGTCTCGCATACCCACC +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVWTESP*WSRIPT
Trigger: GGTGGGTATGCGAGACCAGCACGGTGACTCTGTCCA...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATTGTCTCGGCAGCCTCTaGCTACAGGTGTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHCLGSL*LQVFPE
Trigger: TTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGACA...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGCCAGGCAAGGCCTTGTaGTGCCCAGCCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMPGKAL*CPAWKQ
Trigger: CTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCCTGG...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCGCTCAGCCCCACATCTaGCTCCATGCTGTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSAQPHI*LHAVPN
Trigger: GTTGGGAACAGCATGGAGGCAGATGTGGGGCTGAGC...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGCTATGTCTGCTTGATTaGCTCCAGAGCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWLCLLD*LQSRGA
Trigger: AGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAG...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTATGTCTGCTTGATTaGCTCCAGAGCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPLCLLD*LQSRGA
Trigger: AGCCCCTCGGCTCTGGAGGCAATCAAGCAGACATAG...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCACAGCCAGTCCTGGTaGATGGCAGTGGGTAACACG +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSHSQSW*MAVGNT
Trigger: CGTGTTACCCACTGCCATGCACCAGGACTGGCTGTG...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGGGACCCTTGGCAAGATaGCACAAACTGTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGGPLAR*HKLSAA
Trigger: GGCAGCTGACAGTTTGTGGCATCTTGCCAAGGGTCC...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCAAACAGCCACATTCTaGCGTAGCTGTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSQTATF*RSCLQS
Trigger: AGATTGGAGACAGCTACGGCAGAATGTGGCTGTTTG...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGACCTTCAAGACTGTGTaGTTCGGTGGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGTFKTV*FGGGEG
Trigger: TCCTTCCCCACCACCGAAGCACACAGTCTTGAAGGT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCGTGTCCCTAGGCAAGTaGCTTTCCCTCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSVSLGK*LSLSGP
Trigger: AGGCCCAGAGAGGGAAAGCCACTTGCCTAGGGACAC...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS-3UTR CCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGAGCCTCCGAACAGCTTaGGCTCGGCGGCCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLSLRTA*ARRPRG
Trigger: CCCCCGCGGCCGCCGAGCCCAAGCTGTTCGGAGGCT...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATAGAGGGCCACAAAGGTaGTCACTCCACCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDRGPQR*SLHRPA
Trigger: CGCTGGCCGGTGGAGTGACCACCTTTGTGGCCCTCT...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGACTCCTCAGCCTGGATaGAGTCGGAGGGCGCCACGT +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGTPQPG*SRRAPR
Trigger: ACGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGT...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCGGCCATCGGCGTGTTTaGAGTAGTAGGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSGHRRV*SSRPPA
Trigger: AGCTGGTGGCCTACTACTCCAAACACGCCGATGGCC...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCGGCCACAGCGGGAGCTaGACAGAGTCACCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SFHDASDELLVPEDDRGSGHSGS*TESPCW
Trigger: CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCC...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACGGGGTGGCACAGAAGTaGGGAAGGAGTTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHGVAQK*GRSSVS
Trigger: GCTCACTGAACTCCTTCCCCACTTCTGTGCCACCCC...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGACATAGACCGGGGGTaGCACAGAAGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVDIDRG*HRSGEG
Trigger: TCCTTCCCCACTTCTGTGCCACCCCCGGTCTATGTC...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTTTTGGAAAGGCTCTTTaGCCAGCTCTCGACATAGAC +
Preference number: 4 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSFGKAL*PALDID
Trigger: GTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAA...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACACCTCCGACGAATTGTTaGTTCCTGAGGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTPPTNC*FLRMTE
Trigger: CTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGG...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCCCTTGTTTCCTaGGCTGTCCCAGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHRPLVS*AVPVFP
Trigger: TGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCT...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAAGCGGGCAGCGGCAGTaGGAATCTGCCATCTCGAAT +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGSGQRQ*ESAISN
Trigger: ATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCT...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCAGCGGGCAGCGGCAGTaGGAATCTGCCATCTCGAAT +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSSGQRQ*ESAISN
Trigger: ATTCGAGATGGCAGATTCCCACTGCCGCTGCCCGCT...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCAGGACCAGGGCCTCCTaGACTCTTGGCTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPRTRAS*TLGSSM
Trigger: CATAGAAGAGCCAAGAGTCCAGGAGGCCCTGGTCCT...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACGCCAGTCCTGGTGCATaGCAGTGGGTAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHASPGA*QWVTRP
Trigger: AGGACGTGTTACCCACTGCCATGCACCAGGACTGGC...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAACACACAGGGACCCTTaGCAAGATGCCACAAACTGT +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTTHRDP*QDATNC
Trigger: ACAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGT...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCAAGAACCCCTGGCAGTaGGAATGTTATTGCTATGAT +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPKNPWQ*ECYCYD
Trigger: ATCATAGCAATAACATTCCCACTGCCAGGGGTTCTT...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCGCAAGTCTGGGCCTTaGAATTTCGGAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSRKSGP*NFGAPG
Trigger: GCCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCG...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGATGTCACCCCTGCCTTaGCCTGAAGCCCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVMSPLP*PEALQL
Trigger: TAGCTGGAGGGCTTCAGGCCAAGGCAGGGGTGACAT...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCGAGGGGAAGGGTCTTTaGATTTTTCTTCAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPEGKGL*IFLQRF
Trigger: AAAACGCTGAAGAAAAATCCAAAGACCCTTCCCCTC...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 72 bp GGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGAATaGTTGGTTCCTGAGGATGACAGAGGGAGCACCGGG +
Preference number: 4 (lower is better)
Translates to: GLSQSFHDASDE*LVPEDDRGSTG
Trigger: CCCGGTGCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGACTGGGACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATCGGTGTCCGAGGAGTTaGAGCCTCCGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDRCPRS*SLRTAW
Trigger: CCAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCG...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATGCCGCTCGCCTTTCTTaGAGGACAGGTCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDAARLS*RTGLSP
Trigger: CGGAGACAGACCTGTCCTTCAAGAAAGGCGAGCGGC...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGGTCGAAGTCAGACACTaGGAGGCAGTAGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWVEVRH*EAVGTF
Trigger: AAAGGTGCCTACTGCCTCTCAGTGTCTGACTTCGAC...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACTGTAGTGCTTCACGTTaGGGCCCTTGGCGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHCSASR*GPWRCR
Trigger: TCGACAACGCCAAGGGCCTCAACGTGAAGCACTACA...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCCAGGCTTCAGGGTTTTaGTGGCCACCCTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFQASGF*WPPWWY
Trigger: GTACCACCAGGGTGGCCATCAAAACCCTGAAGCCTG...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGACTCATTGTCTTCAATaGGCCGAGCCAGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGTHCLQ*AEPAQS
Trigger: ACTTTGGGCTGGCTCGGCTCATTGAAGACAATGAGT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAACAGGGCCAGGAATTaGAATGCCACGGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHNRARN*NATGQS
Trigger: ACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTT...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGTACAGATGGGCACACTaGGGCCCAGGGAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLYRWAH*GPGRIH
Trigger: GTGGATTCTCCCTGGGCCTCAGTGTGCCCATCTGTA...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATACCCCTGCCTTGGCCTaGAGCCCTCCAGCTACTAGT +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDTPALA*SPPATS
Trigger: ACTAGTAGCTGGAGGGCTTCAGGCCAAGGCAGGGGT...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGTGGCATCCTTGGGCTTaGTCTTGTTGCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTWHPWA*SCCYPW
Trigger: CCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCA...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGACCACAGCATACAACTaGACCAGCTTCTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGTTAYN*TSFSCL
Trigger: GAGGCATGAGAAGCTGGTGCAGTTGTATGCTGTGGT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGCAAAGTCCGCCACTTTaGACACCAGGTTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTQSPPL*TPGSLP
Trigger: TGGGAGAGAACCTGGTGTGCAAAGTGGCGGACTTTG...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAGGGAATTTGGCACCTTaGCGCGCCGTGTACTCATTG +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGGNLAP*RAVYSL
Trigger: CAATGAGTACACGGCGCGGCAAGGTGCCAAATTCCC...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATTGGCACATGAGGTCGTaGAGGGACTCGGGACACTCC +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDWHMRS*RDSGHS
Trigger: GGAGTGTCCCGAGTCCCTGCACGACCTCATGTGCCA...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGAGCTCCAGGAGGGAGTaGAGGGAGAGGCGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRSSRRE*RERRAA
Trigger: GGCCGCACGCCTCTCCCTGCACTCCCTCCTGGAGCT...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGTGTCTCGGCAGCCTCTaGCTACAGGTGTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWCLGSL*LQVFPE
Trigger: TTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGACA...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCATCTGCCATCTCGAATaGATCCTCAGACCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGICHLE*ILRPLV
Trigger: AACAAGGGGTCTGAGGATGCATTCGAGATGGCAGAT...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACGCGGCAGTGGGAATCTaGCATCTCGAATGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHAAVGI*HLECIL
Trigger: GAGGATGCATTCGAGATGGCAGATTCCCACTGCCGC...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCCCACATCTGCCTCCATaGTGTTCCCAACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFPHLPP*CSQQLG
Trigger: GCCCAGCTGTTGGGAACAGCATGGAGGCAGATGTGG...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGATTCATAGGCAGGCACTaGTTGGCCTCCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGFIGRH*LASFPT
Trigger: AGTGGGGAAGGAGGCCAAGCAGTGCCTGCCTATGAA...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACACAAACAGCCACATTCTaGCGTAGCTGTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTQTATF*RSCLQS
Trigger: AGATTGGAGACAGCTACGGCAGAATGTGGCTGTTTG...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGGGAAGTCCTGTGATGTaGCTTGTCCTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTGSPVM*LVLLPG
Trigger: ACCTGGGAGAAGGACAAGGCACATCACAGGACTTCC...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGGGAAGTCCTGTGATGTaGCTTGTCCTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGGSPVM*LVLLPG
Trigger: ACCTGGGAGAAGGACAAGGCACATCACAGGACTTCC...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGACCAGCACCCCTGCCCTaGACTCCTAGGAAACACACG +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRPAPLP*TPRKHT
Trigger: CGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTGCTGG...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCGTGTCCCTAGGCAAGTaGCTTTCCCTCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFVSLGK*LSLSGP
Trigger: AGGCCCAGAGAGGGAAAGCCACTTGCCTAGGGACAC...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGAGTAGGCACCTTTCGTaGTCTCACTTTCTCGCACGA +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRESRHLS*SHFLAR
Trigger: TCGTGCGAGAAAGTGAGACCACGAAAGGTGCCTACT...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGTAGGCACCTTTCGTaGTCTCACTTTCTCGCACGA +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHSRHLS*SHFLAR
Trigger: TCGTGCGAGAAAGTGAGACCACGAAAGGTGCCTACT...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATCCTTCCGCCAGCACTaGCACATGAGGTCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRSFRQH*HMRSCR
Trigger: CCTGCACGACCTCATGTGCCAGTGCTGGCGGAAGGA...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGACAGAGTCACCGTGCTaGTCTCGCATACCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMTESPC*SRIPTA
Trigger: GGCGGTGGGTATGCGAGACCAGCACGGTGACTCTGT...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCGGGGTGGCACAGAAGTaGGGAAGGAGTTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFGVAQK*GRSSVS
Trigger: GCTCACTGAACTCCTTCCCCACTTCTGTGCCACCCC...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATTTGGAAAGGCTCTTTaGCCAGCTCTCGACATAGAC +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTFGKAL*PALDID
Trigger: GTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAA...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGGGCCTCCTGGACTCTTaGCTCTTCTATGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGGLLDS*LFYVCL
Trigger: CAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCC...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCCTGGTGCATGGCAGTaGGTAACACGTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGPGAWQ*VTRPLS
Trigger: TGAAAGAGGACGTGTTACCCACTGCCATGCACCAGG...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATACACACAGGGACCCTTaGCAAGATGCCACAAACTGT +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHTHRDP*QDATNC
Trigger: ACAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGT...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATCGCAAGTCTGGGCCTTaGAATTTCGGAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDRKSGP*NFGAPG
Trigger: GCCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCG...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCTCAGCGTCCTCATCTaGTTTCAAATCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRELSVLI*FQILAL
Trigger: CAGAGCCAGGATTTGAAACCAGATGAGGACGCTGAG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373578.7
CDS-3UTR TCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGCTGACTCCCGTCTGGTaGTCTTGCCAAAATACCACT +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWLTPVW*SCQNTT
Trigger: AGTGGTATTTTGGCAAGATCACCAGACGGGAGTCAG...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCTCGGGTTCTCTGCATTaGGCAGTAACCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSSGSLH*AVTALT
Trigger: AGTCAGAGCGGTTACTGCTCAATGCAGAGAACCCGA...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCGTCGAAGTCAGACACTaGGAGGCAGTAGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSVEVRH*EAVGTF
Trigger: AAAGGTGCCTACTGCCTCTCAGTGTCTGACTTCGAC...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCACTCATTGTCTTCAATaGGCCGAGCCAGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPTHCLQ*AEPAQS
Trigger: ACTTTGGGCTGGCTCGGCTCATTGAAGACAATGAGT...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCCCCGTCCCTTTGTGGTaGGCTCAGTCAGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: SFHDASDELLVPEDDRGSPVPLW*AQSAGS
Trigger: GGATCCTGCTGACTGAGCTCACCACAAAGGGACGGG...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGGTCCCAGTCTTTCCATaGTGCCTCCGACGAATTGTT +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWVPVFP*CLRRIV
Trigger: AACAATTCGTCGGAGGCATCATGGAAAGACTGGGAC...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCACCCACAAGCCGATTaGAGCCTCTCTCTCCACACC +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGHPQAD*SLSLHT
Trigger: GGTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATGAGAGCTCGCTGGGGTaGGTGAGCCCAGATTTGACT +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDESSLG*VSPDLT
Trigger: AGTCAAATCTGGGCTCACTCACCCCAGCGAGCTCTC...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGGAGAGCTCGCTGGGGTaGGTGAGCCCAGATTTGACT +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMESSLG*VSPDLT
Trigger: AGTCAAATCTGGGCTCACTCACCCCAGCGAGCTCTC...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGAGTTGGAGAGGGATTTaGGAGCTCGCTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLSWRGI*ELAGVS
Trigger: ACTCACCCCAGCGAGCTCTCAAATCCCTCTCCAACT...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCAGTTGGAGAGGGATTTaGGAGCTCGCTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFSWRGI*ELAGVS
Trigger: ACTCACCCCAGCGAGCTCTCAAATCCCTCTCCAACT...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTTGTTCAATAAACTGTTaGTCAGATTCTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: CRERRAATAGAGQSHRAGCSINC*SDSEVC
Trigger: ACAGACCTCAGAATCTGATCAACAGTTTATTGAACA...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGCTCAGGGAAGTCCTGTaGTGTGCCTTGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLLREVL*CALSFS
Trigger: GGAGAAGGACAAGGCACATCACAGGACTTCCCTGAG...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGTCCACCACGGACATTTaGGTCCTGAACTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWSTTDI*VLNLSC
Trigger: GCATGACAAGTTCAGGACTCAAATGTCCGTGGTGGA...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATCCTTCCTCGTGTTGTTaGCAATCTGGAGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDPSSCC*QSGAAR
Trigger: GCGAGCGGCTCCAGATTGTCAACAACACGAGGAAGG...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373558.2
CDS-3UTR GCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGATGGCATCCTTGGGCTTaGTCTTGTTGCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGWHPWA*SCCYPW
Trigger: CCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCA...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCCGCCGCTGTCCAGCTTaGGGATCTTGTAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFRRCPA*GSCSAS
Trigger: TGAAGCACTACAAGATCCGCAAGCTGGACAGCGGCG...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGCAAAGTCCGCCACTTTaGACACCAGGTTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVQSPPL*TPGSLP
Trigger: TGGGAGAGAACCTGGTGTGCAAAGTGGCGGACTTTG...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGGGAATTTGGCACCTTaGCGCGCCGTGTACTCATTG +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLGNLAP*RAVYSL
Trigger: CAATGAGTACACGGCGCGGCAAGGTGCCAAATTCCC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGATCTGCCATCTCGAATaGATCCTCAGACCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGICHLE*ILRPLV
Trigger: AACAAGGGGTCTGAGGATGCATTCGAGATGGCAGAT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCGCGGCAGTGGGAATCTaGCATCTCGAATGCATCCTC +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSAAVGI*HLECIL
Trigger: GAGGATGCATTCGAGATGGCAGATTCCCACTGCCGC...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGCCACATCTGCCTCCATaGTGTTCCCAACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMPHLPP*CSQQLG
Trigger: GCCCAGCTGTTGGGAACAGCATGGAGGCAGATGTGG...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGGCTCAGCCCCACATCTaGCTCCATGCTGTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMAQPHI*LHAVPN
Trigger: GTTGGGAACAGCATGGAGGCAGATGTGGGGCTGAGC...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGGCTCAGCCCCACATCTaGCTCCATGCTGTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGAQPHI*LHAVPN
Trigger: GTTGGGAACAGCATGGAGGCAGATGTGGGGCTGAGC...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGTGGCTCTTCTATGTCTaGTTGATTGCCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGWLFYV*LIASRA
Trigger: GGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCA...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGGCCAGGAATTGAAATaGCACGGGACAAAGTACGGG +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVGQELK*HGTKYG
Trigger: CCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCC...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACGGCCAGGAATTGAAATaGCACGGGACAAAGTACGGG +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHGQELK*HGTKYG
Trigger: CCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCC...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCGGACCCTTGGCAAGATaGCACAAACTGTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSGPLAR*HKLSAA
Trigger: GGCAGCTGACAGTTTGTGGCATCTTGCCAAGGGTCC...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCAGTGGGAATGTTATTaGTATGATGAGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREQWECY*YDEGAM
Trigger: CATGGCCCCCTCATCATAGCAATAACATTCCCACTG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCTGTCCTTCTCCCAGGTaGTCACCCCCTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFCPSPR*SPPNTG
Trigger: ACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACA...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGGTGTTGTTGACAATCTaGAGCCGCTCGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWVLLTI*SRSPFL
Trigger: CAAGAAAGGCGAGCGGCTCCAGATTGTCAACAACAC...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGAGTAGGCACCTTTCGTaGTCTCACTTTCTCGCACGA +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTSRHLS*SHFLAR
Trigger: TCGTGCGAGAAAGTGAGACCACGAAAGGTGCCTACT...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATGGCCATCGGCGTGTTTaGAGTAGTAGGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDGHRRV*SSRPPA
Trigger: AGCTGGTGGCCTACTACTCCAAACACGCCGATGGCC...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCCTCCGACGAATTGTTaGTTCCTGAGGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGPPTNC*FLRMTE
Trigger: CTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGG...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAAGACCCCTTGTTTCCTaGGCTGTCCCAGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGRPLVS*AVPVFP
Trigger: TGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCT...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCAGACCCCTTGTTTCCTaGGCTGTCCCAGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSRPLVS*AVPVFP
Trigger: TGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCT...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGGCTGTTCCCAACAGCTaGGCTGAGCGGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRAVPNS*AERAAA
Trigger: TGCCGCTGCCCGCTCAGCCCAGCTGTTGGGAACAGC...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGAGGACCAGGGCCTCCTaGACTCTTGGCTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLRTRAS*TLGSSM
Trigger: CATAGAAGAGCCAAGAGTCCAGGAGGCCCTGGTCCT...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGCCAGTCCTGGTGCATaGCAGTGGGTAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDASPGA*QWVTRP
Trigger: AGGACGTGTTACCCACTGCCATGCACCAGGACTGGC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCTTACACAGCCAGTCCTaGTGCATGGCAGTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSLHSQS*CMAVGN
Trigger: GTTACCCACTGCCATGCACCAGGACTGGCTGTGTAA...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 72 bp CTGTCCCAGTCTTTCCATGATGCCTCCGACGAATTGTaGGTTCCTGAGGATGACAGAGGGAGCACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSQSFHDASDEL*VPEDDRGSTGF
Trigger: GAACCCGGTGCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGACTGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACCTGACTCCCGTCTGGTaGTCTTGCCAAAATACCACT +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHLTPVW*SCQNTT
Trigger: AGTGGTATTTTGGCAAGATCACCAGACGGGAGTCAG...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGCTGACTCCCGTCTGGTaGTCTTGCCAAAATACCACT +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVLTPVW*SCQNTT
Trigger: AGTGGTATTTTGGCAAGATCACCAGACGGGAGTCAG...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGTGTAGTGCTTCACGTTaGGGCCCTTGGCGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGCSASR*GPWRCR
Trigger: TCGACAACGCCAAGGGCCTCAACGTGAAGCACTACA...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATATAGCCGGCTGGCTCTaGAGGTCAAACATCACCCAC +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDIAGWL*RSNITH
Trigger: GTGGGTGATGTTTGACCTTCAGAGCCAGCCGGCTAT...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCTCTTCTATGTCTGCTTaGTTGCCTCCAGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFSSMSA*LPPEPR
Trigger: CCTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGA...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAACAGGGCCAGGAATTaGAATGCCACGGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHNRARN*NATGQS
Trigger: ACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTT...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCATAGTCATCTaGAATCTACAAAACACTGTT +
Preference number: 4 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSLCIVI*NLQNTV
Trigger: AACAGTGTTTTGTAGATTTCAGATGACTATGCAGAG...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTGGCATCCTTGGGCTTaGTCTTGTTGCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSWHPWA*SCCYPW
Trigger: CCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGACCACAGCATACAACTaGACCAGCTTCTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVTTAYN*TSFSCL
Trigger: GAGGCATGAGAAGCTGGTGCAGTTGTATGCTGTGGT...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGGGGAATTTGGCACCTTaGCGCGCCGTGTACTCATTG +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMGNLAP*RAVYSL
Trigger: CAATGAGTACACGGCGCGGCAAGGTGCCAAATTCCC...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAGGGAATTTGGCACCTTaGCGCGCCGTGTACTCATTG +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRGNLAP*RAVYSL
Trigger: CAATGAGTACACGGCGCGGCAAGGTGCCAAATTCCC...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGGGCAAGGCCTTGTGCTaGCCAGCCTGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLGKALC*PAWKQR
Trigger: CCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTTGCC...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGGCCAGGAATTGAAATaGCACGGGACAAAGTACGGG +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLGQELK*HGTKYG
Trigger: CCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGCAGTGGGAATGTTATTaGTATGATGAGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTQWECY*YDEGAM
Trigger: CATGGCCCCCTCATCATAGCAATAACATTCCCACTG...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCAGTGGGAATGTTATTaGTATGATGAGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGQWECY*YDEGAM
Trigger: CATGGCCCCCTCATCATAGCAATAACATTCCCACTG...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGTGTCCTTCTCCCAGGTaGTCACCCCCTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMCPSPR*SPPNTG
Trigger: ACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACA...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCACTCCCCAATGTCACTaGTACCATCCACCACGGACA +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFTPQCH*YHPPRT
Trigger: TGTCCGTGGTGGATGGTAGCAGTGACATTGGGGAGT...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGACTCCCCAATGTCACTaGTACCATCCACCACGGACA +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLTPQCH*YHPPRT
Trigger: TGTCCGTGGTGGATGGTAGCAGTGACATTGGGGAGT...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCACCTTCAAGACTGTGTaGTTCGGTGGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFTFKTV*FGGGEG
Trigger: TCCTTCCCCACCACCGAAGCACACAGTCTTGAAGGT...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATGCTGGCTGGCATCCTTaGGCTTGCTCTTGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDAGWHP*ACSCCY
Trigger: GTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGC...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCCCATCGCTCCTCTTTaGAAAGGCTCTTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGPIAPL*KGSLAS
Trigger: GCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTCAACTGTCTCCCCATaGGTGAAATGGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSSTVSP*VKWGQG
Trigger: TCCTTGCCCCCATTTCACCCATGGGGAGACAGTTGA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCGGCCTCCTGGACTCTTaGCTCTTCTATGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFGLLDS*LFYVCL
Trigger: CAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCC...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCTTACACAGCCAGTCCTaGTGCATGGCAGTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFLHSQS*CMAVGN
Trigger: GTTACCCACTGCCATGCACCAGGACTGGCTGTGTAA...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAGGACGGGAGAAGACTTaGGTAATAAAGACGTATGAA +
Preference number: 4 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTGREKT*VIKTYE
Trigger: TTCATACGTCTTTATTACCCAAGTCTTCTCCCGTCC...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCGAGGGGAAGGGTCTTTaGATTTTTCTTCAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGEGKGL*IFLQRF
Trigger: AAAACGCTGAAGAAAAATCCAAAGACCCTTCCCCTC...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 72 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTaGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCC +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDP*FPGLSQSFHDA
Trigger: GGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 72 bp GCTGGCTCTGAAGGTCAAACATCACCCACAAGCCGATaGAAGCCTCTCTCTCCACACCTGCACCTTTTACCC +
Preference number: 4 (lower is better)
Translates to: AGSEGQTSPTSR*KPLSPHLHLLP
Trigger: GGGTAAAAGGTGCAGGTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTGATGTTTGACCTTCAGAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGTCTTCTATGTCTGCTTaGTTGCCTCCAGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMSSMSA*LPPEPR
Trigger: CCTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGA...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAATGAGGGGGCCATGGTaGAATGTACAACATGTTTGG +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGMRGPW*NVQHVW
Trigger: CCAAACATGTTGTACATTTCACCATGGCCCCCTCAT...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGACCCCTGCCTTGGCCTaGAGCCCTCCAGCTACTAGT +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRTPALA*SPPATS
Trigger: ACTAGTAGCTGGAGGGCTTCAGGCCAAGGCAGGGGT...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGCTCGTCGTGTATTTGTaGTCTCCTCTAGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLLVVYL*SPLGRL
Trigger: AAGCCTGCCTAGAGGAGATCACAAATACACGACGAG...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCAAAGTCCGCCACTTTaGACACCAGGTTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGQSPPL*TPGSLP
Trigger: TGGGAGAGAACCTGGTGTGCAAAGTGGCGGACTTTG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTGGCTCTTCTATGTCTaGTTGATTGCCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSWLFYV*LIASRA
Trigger: GGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCTGGGCTTGCTCTTGTTaGTACCCATGGTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSWACSC*YPWSFL
Trigger: CAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCA...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS-3UTR GCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAACTCCCCAATGTCACTaGTACCATCCACCACGGACA +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRTPQCH*YHPPRT
Trigger: TGTCCGTGGTGGATGGTAGCAGTGACATTGGGGAGT...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGCCAGCACCCCTGCCCTaGACTCCTAGGAAACACACG +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRPAPLP*TPRKHT
Trigger: CGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTGCTGG...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACCATAGCTGGGCAAGTTaGTTCACTTCTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHHSWAS*FTSLSF
Trigger: GAAGCTCAGAGAAGTGAAGCAACTTGCCCAGCTATG...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373578.7
CDS-3UTR CCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGTGTTGTTGACAATCTaGAGCCGCTCGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLVLLTI*SRSPFL
Trigger: CAAGAAAGGCGAGCGGCTCCAGATTGTCAACAACAC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCGTGTTGTTGACAATCTaGAGCCGCTCGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSVLLTI*SRSPFL
Trigger: CAAGAAAGGCGAGCGGCTCCAGATTGTCAACAACAC...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCAGTAGGCACCTTTCGTaGTCTCACTTTCTCGCACGA +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFSRHLS*SHFLAR
Trigger: TCGTGCGAGAAAGTGAGACCACGAAAGGTGCCTACT...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGTCCTTCCGCCAGCACTaGCACATGAGGTCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRSFRQH*HMRSCR
Trigger: CCTGCACGACCTCATGTGCCAGTGCTGGCGGAAGGA...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGGAAGGGCCTCGCCCCTaGCAATTCAGCCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLEGPRP*QFSPTE
Trigger: CTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTC...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATTCAACTGTCTCCCCATaGGTGAAATGGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDSTVSP*VKWGQG
Trigger: TCCTTGCCCCCATTTCACCCATGGGGAGACAGTTGA...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATTTACACAGCCAGTCCTaGTGCATGGCAGTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDLHSQS*CMAVGN
Trigger: GTTACCCACTGCCATGCACCAGGACTGGCTGTGTAA...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGAAGAACCCCTGGCAGTaGGAATGTTATTGCTATGAT +
Preference number: 4 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREKNPWQ*ECYCYD
Trigger: ATCATAGCAATAACATTCCCACTGCCAGGGGTTCTT...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGAAGAACCCCTGGCAGTaGGAATGTTATTGCTATGAT +
Preference number: 4 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGKNPWQ*ECYCYD
Trigger: ATCATAGCAATAACATTCCCACTGCCAGGGGTTCTT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTGGCTCAAGAACCCCTaGCAGTGGGAATGTTATTGC +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSWLKNP*QWECYC
Trigger: GCAATAACATTCCCACTGCCAGGGGTTCTTGAGCCA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCTGGCTCAAGAACCCCTaGCAGTGGGAATGTTATTGC +
Preference number: 4 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFWLKNP*QWECYC
Trigger: GCAATAACATTCCCACTGCCAGGGGTTCTTGAGCCA...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 72 bp CTCCCCAATGTCACTGCTACCATCCACCACGGACATTaGAGTCCTGAACTTGTCATGCTCAGGGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPNVTATIHHGH*SPELVMLREVL
Trigger: CAGGACTTCCCTGAGCATGACAAGTTCAGGACTCAAATGTCCGTGGTGGATGGTAGCAGTGACATTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATCTGACTCCCGTCTGGTaGTCTTGCCAAAATACCACT +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDLTPVW*SCQNTT
Trigger: AGTGGTATTTTGGCAAGATCACCAGACGGGAGTCAG...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCTCTTCTATGTCTGCTTaGTTGCCTCCAGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SFHDASDELLVPEDDRGSSSMSA*LPPEPR
Trigger: CCTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGA...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAAACAGGGCCAGGAATTaGAATGCCACGGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRNRARN*NATGQS
Trigger: ACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTT...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCATGAGGGGGCCATGGTaGAATGTACAACATGTTTGG +
Preference number: 4 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFMRGPW*NVQHVW
Trigger: CCAAACATGTTGTACATTTCACCATGGCCCCCTCAT...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGCGGACATTTGAGTCCTaGACTTGTCATGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMRTFES*TCHAQG
Trigger: TCCCTGAGCATGACAAGTTCAGGACTCAAATGTCCG...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGTCCACCACGGACATTTaGGTCCTGAACTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGSTTDI*VLNLSC
Trigger: GCATGACAAGTTCAGGACTCAAATGTCCGTGGTGGA...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATCTCGTCGTGTATTTGTaGTCTCCTCTAGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDLVVYL*SPLGRL
Trigger: AAGCCTGCCTAGAGGAGATCACAAATACACGACGAG...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGCACAGCCAGTCCTGGTaGATGGCAGTGGGTAACACG +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRHSQSW*MAVGNT
Trigger: CGTGTTACCCACTGCCATGCACCAGGACTGGCTGTG...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGCAGTGGGAATGTTATTaGTATGATGAGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLQWECY*YDEGAM
Trigger: CATGGCCCCCTCATCATAGCAATAACATTCCCACTG...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGCCAGCACCCCTGCCCTaGACTCCTAGGAAACACACG +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLPAPLP*TPRKHT
Trigger: CGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTGCTGG...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGTGTTGTTGACAATCTaGAGCCGCTCGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDVLLTI*SRSPFL
Trigger: CAAGAAAGGCGAGCGGCTCCAGATTGTCAACAACAC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGCTGCAGGAAGGCCTCTaGAGACATCGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRLQEGL*RHRARL
Trigger: AAGCCTGGCACGATGTCTCCAGAGGCCTTCCTGCAG...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATCCTCCGACGAATTGTTaGTTCCTGAGGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDPPTNC*FLRMTE
Trigger: CTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGG...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCCCTGGTGCATGGCAGTaGGTAACACGTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SFHDASDELLVPEDDRGSPGAWQ*VTRPLS
Trigger: TGAAAGAGGACGTGTTACCCACTGCCATGCACCAGG...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGCAGTTGCAGAGGCCATaGCCACATGTGGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRQLQRP*PHVGQT
Trigger: AGTCTGCCCCACATGTGGCCATGGCCTCTGCAACTG...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGAACACACAGGGACCCTTaGCAAGATGCCACAAACTGT +
Preference number: 4 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRTHRDP*QDATNC
Trigger: ACAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGT...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGAAGAACCCCTGGCAGTaGGAATGTTATTGCTATGAT +
Preference number: 4 (lower is better)
Translates to: SLLFGKALWPALDIDRGWKNPWQ*ECYCYD
Trigger: ATCATAGCAATAACATTCCCACTGCCAGGGGTTCTT...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGGAGGGGAAGGGTCTTTaGATTTTTCTTCAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGEGKGL*IFLQRF
Trigger: AAAACGCTGAAGAAAAATCCAAAGACCCTTCCCCTC...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGTAAATGGGCTCCTCTaGAACCACAGCATACAACTG +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDVNGLL*NHSIQL
Trigger: CAGTTGTATGCTGTGGTTTCAGAGGAGCCCATTTAC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGGTAAATGGGCTCCTCTaGAACCACAGCATACAACTG +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGADLGRRTGVNGLL*NHSIQL
Trigger: CAGTTGTATGCTGTGGTTTCAGAGGAGCCCATTTAC...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGTGCCTGTCTCCCCCTTaGGAAAGTCCAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRCLSPP*ESPANS
Trigger: GGAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCA...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCAACAGGGCCAGGAATTaGAATGCCACGGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: SFHDASDELLVPEDDRGSNRARN*NATGQS
Trigger: ACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTT...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATTGTTCAATAAACTGTTaGTCAGATTCTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHCSINC*SDSEVC
Trigger: ACAGACCTCAGAATCTGATCAACAGTTTATTGAACA...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGTTGCTTCACTTCTCTaGGCTTCTGTTCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLVASLL*ASVLCS
Trigger: AGAACAGAGAACAGAAGCTCAGAGAAGTGAAGCAAC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373578.7
CDS-3UTR CCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGGACATAGACCGGGGGTaGCACAGAAGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLDIDRG*HRSGEG
Trigger: TCCTTCCCCACTTCTGTGCCACCCCCGGTCTATGTC...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGTTTGGAAAGGCTCTTTaGCCAGCTCTCGACATAGAC +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMFGKAL*PALDID
Trigger: GTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAA...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCTGGCTCAAGAACCCCTaGCAGTGGGAATGTTATTGC +
Preference number: 4 (lower is better)
Translates to: SFHDASDELLVPEDDRGSWLKNP*QWECYC
Trigger: GCAATAACATTCCCACTGCCAGGGGTTCTTGAGCCA...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAGGACGGGAGAAGACTTaGGTAATAAAGACGTATGAA +
Preference number: 4 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGGREKT*VIKTYE
Trigger: TTCATACGTCTTTATTACCCAAGTCTTCTCCCGTCC...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
3UTR CAA 72 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTaGGGGAGGAGAACAGGGCCAGGAATTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: TLFPPHELKGAD*GRRTGPGIEMP
Trigger: TGGCATTTCAATTCCTGGCCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGTGTAGTGCTTCACGTTaGGGCCCTTGGCGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLCSASR*GPWRCR
Trigger: TCGACAACGCCAAGGGCCTCAACGTGAAGCACTACA...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCATGAGGGGGCCATGGTaGAATGTACAACATGTTTGG +
Preference number: 4 (lower is better)
Translates to: SFHDASDELLVPEDDRGSMRGPW*NVQHVW
Trigger: CCAAACATGTTGTACATTTCACCATGGCCCCCTCAT...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGCTGTTGATCAGATTCTaGGGTCTGTTTGTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTLLIRF*GLFVFN
Trigger: ATTAAACACAAACAGACCTCAGAATCTGATCAACAG...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGTGTTCAATAAACTGTTaGTCAGATTCTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGCSINC*SDSEVC
Trigger: ACAGACCTCAGAATCTGATCAACAGTTTATTGAACA...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGTGTCCTTCTCCCAGGTaGTCACCCCCTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLCPSPR*SPPNTG
Trigger: ACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACA...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGTTACACAGCCAGTCCTaGTGCATGGCAGTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRLHSQS*CMAVGN
Trigger: GTTACCCACTGCCATGCACCAGGACTGGCTGTGTAA...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCTCTGCATAGTCATCTaGAATCTACAAAACACTGTT +
Preference number: 4 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSLCIVI*NLQNTV
Trigger: AACAGTGTTTTGTAGATTTCAGATGACTATGCAGAG...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACCTGTTGATCAGATTCTaGGGTCTGTTTGTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHLLIRF*GLFVFN
Trigger: ATTAAACACAAACAGACCTCAGAATCTGATCAACAG...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGCTGTTGATCAGATTCTaGGGTCTGTTTGTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVLLIRF*GLFVFN
Trigger: ATTAAACACAAACAGACCTCAGAATCTGATCAACAG...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGTGTCTCGGCAGCCTCTaGCTACAGGTGTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLCLGSL*LQVFPE
Trigger: TTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGACA...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGGGACGGGAGAAGACTTaGGTAATAAAGACGTATGAA +
Preference number: 4 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMGREKT*VIKTYE
Trigger: TTCATACGTCTTTATTACCCAAGTCTTCTCCCGTCC...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCTCTGCATAGTCATCTaGAATCTACAAAACACTGTT +
Preference number: 4 (lower is better)
Translates to: WESAISNASSDPLFPGLSLCIVI*NLQNTV
Trigger: AACAGTGTTTTGTAGATTTCAGATGACTATGCAGAG...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR TCA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGCTGTTGATCAGATTCTaGGGTCTGTTTGTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLLLIRF*GLFVFN
Trigger: ATTAAACACAAACAGACCTCAGAATCTGATCAACAG...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR GCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGTGGCTCTTCTATGTCTaGTTGATTGCCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLWLFYV*LIASRA
Trigger: GGCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCA...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCTCTTGTTGCTACCCATaGTCCTTTTTGGGAGAGTTA +
Preference number: 4 (lower is better)
Translates to: SFHDASDELLVPEDDRGSSCCYP*SFLGEL
Trigger: TAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGA...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS-3UTR TCA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATCTCTGCATAGTCATCTaGAATCTACAAAACACTGTT +
Preference number: 4 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDLCIVI*NLQNTV
Trigger: AACAGTGTTTTGTAGATTTCAGATGACTATGCAGAG...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CCA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGGGACGGGAGAAGACTTaGGTAATAAAGACGTATGAA +
Preference number: 4 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLGREKT*VIKTYE
Trigger: TTCATACGTCTTTATTACCCAAGTCTTCTCCCGTCC...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS GCA 90 bp AAGCGCCCCCGCCAGCGCCGTGCACGTTCTCGGCGGGCTCCAGGCTaGGGCGCCGCTGGCTGGCATCCTTGGGCTTGCTCTTGTTGCTAC +
Preference number: 5 (lower is better)
Translates to: KRPRQRRARSRRAPG*GAAGWHPWACSCCY
Trigger: GTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGTGCACGGCGCTGGCGGGGGCGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACTCGGCCGAGGCTGGCTaGCTGGGGGTCTGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYSAEAG*LGVCEA
Trigger: CGCCTCGCAGACCCCCAGCAAGCCAGCCTCGGCCGA...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS TCA 90 bp TGGCCAGGCCCTGAGTCTGCGGCTTGGACGTGGGGCACACGGTGGTaGGGCGGTGGCACAGGCCATCGGCGTGTTCCAGCACGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: WPGPESAAWTWGTRW*GGGTGHRRVPARKP
Trigger: GGGCTTGCGTGCTGGAACACGCCGATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGGGCCTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS-3UTR CAA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCCAGCCCTGGCCCAGCTaGACCTCCAGCCGCAGCGAC +
Preference number: 5 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPQPWPS*TSSRSD
Trigger: GTCGCTGCGGCTGGAGGTCAAGCTGGGCCAGGGCTG...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS GCA 90 bp ACCCAGCCCAGGATCCAAGCCGAGAAGCCGGTCTGGGCCCGCCTGTaGCTAGAGGTTCTCCCCGGGCTGGTACTGGGGCTCGGTGGACGT +
Preference number: 5 (lower is better)
Translates to: TQPRIQAEKPVWARL*LEVLPGLVLGLGGR
Trigger: ACGTCCACCGAGCCCCAGTACCAGCCCGGGGAGAACCTCTAGGCACAGGCGGGCCCAGACCGGCTTCTCGGCTTGGATCCTGGGCTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000477066.5
CDS CCA 90 bp CCAGCGCCGTGCACGTTCTCGGCGGGCTCCAGGCTGCGGCGCCGCTaGCTGGCATCCTTGGGCTTGCTCTTGTTGCTACCCATGGTCCTG +
Preference number: 5 (lower is better)
Translates to: PAPCTFSAGSRLRRR*LASLGLLLLLPMVL
Trigger: CAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGTGCACGGCGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS CCA 90 bp CCAGCGCCGTGCACGTTCTCGGCGGGCTCCAGGCTGCGGCGCCGCTaGCTGGCATCCTTGGGCTTGCTCTTGTTGCTACCCATGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PAPCTFSAGSRLRRR*LASLGLLLLLPMVL
Trigger: AAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGTGCACGGCGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGATAGGCAGGCACTGCTaGGCCTCCTTCCCCACTGGC +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWIGRHC*ASFPTG
Trigger: GCCAGTGGGGAAGGAGGCCAAGCAGTGCCTGCCTAT...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGCCGCAAGTCTGGGCCTaGGAATTTCGGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWPQVWA*EFRSPR
Trigger: CCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCGG...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS TCA 90 bp TGGCCAGGCCCTGAGTCTGCGGCTTGGACGTGGGGCACACGGTGGTaGGGCGGTGGCACAGGCCATCGGCGTGTTTGGAGTAGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: WPGPESAAWTWGTRW*GGGTGHRRVWSSRP
Trigger: TGGCCTACTACTCCAAACACGCCGATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGGGCCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS GCA 90 bp AGCACGCAAGCCCCGCGAGCTCCCTCTGCCGCTCTCTTCCCTCTTTaGTGCAATCGATCTGGCCGCCCCCTCCTCCTCTCCCAGCAACCG +
Preference number: 5 (lower is better)
Translates to: STQAPRAPSAALFPL*CNRSGRPLLLSQQP
Trigger: CGGTTGCTGGGAGAGGAGGAGGGGGCGGCCAGATCGATTGCAGCAAAGAGGGAAGAGAGCGGCAGAGGGAGCTCGCGGGGCTTGCGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS GCA 90 bp CAGGCCATCGGCGTGTTCCAGCACGCAAGCCCCGCGAGCTCCCTCTaGCGCTCTCTTCCCTCTTTGCTGCAATCGATCTGGCCGCCCCCT +
Preference number: 5 (lower is better)
Translates to: QAIGVFQHASPASSL*RSLPSLLQSIWPPP
Trigger: AGGGGGCGGCCAGATCGATTGCAGCAAAGAGGGAAGAGAGCGGCAGAGGGAGCTCGCGGGGCTTGCGTGCTGGAACACGCCGATGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS-3UTR CAA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATTCGGCCGAGGCTGGCTaGCTGGGGGTCTGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHSAEAG*LGVCEA
Trigger: CGCCTCGCAGACCCCCAGCAAGCCAGCCTCGGCCGA...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTTCTCCCACCAGGATGTaGGCTGCACGAAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRSPTRM*AARRSR
Trigger: CCGGGACCTTCGTGCAGCCAACATCCTGGTGGGAGA...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCTCTCCCACCAGGATGTaGGCTGCACGAAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPSPTRM*AARRSR
Trigger: CCGGGACCTTCGTGCAGCCAACATCCTGGTGGGAGA...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGCACTTGATGGGGAATTaGGCACCTTGCCGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWHLMGN*APCRAV
Trigger: CACGGCGCGGCAAGGTGCCAAATTCCCCATCAAGTG...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS GCA 90 bp CTTACTCTGGGGCTCCTCAGGGCAGCCCCCTCCATACCAGCCAGCTaGAGAGAAAGGCGGGCAGTGGGACACTGCGTGGAGCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LTLGLLRAAPSIPAS*RERRAVGHCVEQGE
Trigger: CTCTCCCTGCTCCACGCAGTGTCCCACTGCCCGCCTTTCTCTGCAGCTGGCTGGTATGGAGGGGGCTGCCCTGAGGAGCCCCAGAGTAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS GCA 90 bp ACGCAAGCCCCGCGAGCTCCCTCTGCCGCTCTCTTCCCTCTTTGCTaGAATCGATCTGGCCGCCCCCTCCTCCTCTCCCAGCAACCGGTT +
Preference number: 5 (lower is better)
Translates to: TQAPRAPSAALFPLC*NRSGRPLLLSQQPV
Trigger: AACCGGTTGCTGGGAGAGGAGGAGGGGGCGGCCAGATCGATTGCAGCAAAGAGGGAAGAGAGCGGCAGAGGGAGCTCGCGGGGCTTGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS CCA 90 bp CGCCGTGCACGTTCTCGGCGGGCTCCAGGCTGCGGCGCCGCTGGCTaGCATCCTTGGGCTTGCTCTTGTTGCTACCCATGGTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: RRARSRRAPGCGAAG*HPWACSCCYPWSFL
Trigger: CAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGTGCACGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS CCA 90 bp GCGAGCTCCCTCTGCCGCTCTCTTCCCTCTTTGCTGCAATCGATCTaGCCGCCCCCTCCTCCTCTCCCAGCAACCGGTTCAGACCGGTCC +
Preference number: 5 (lower is better)
Translates to: ASSLCRSLPSLLQSI*PPPPPLPATGSDRS
Trigger: GGACCGGTCTGAACCGGTTGCTGGGAGAGGAGGAGGGGGCGGCCAGATCGATTGCAGCAAAGAGGGAAGAGAGCGGCAGAGGGAGCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTAGGCAGCCTGGGGTCTaGGCACAAACACCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRRQPGV*AQTPGV
Trigger: CACACCTGGTGTTTGTGCCAAGACCCCAGGCTGCCT...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGAGCCGCTCGCCTTTCTaGAAGGACAGGTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWSRSPF*KDRSVS
Trigger: GGAGACAGACCTGTCCTTCAAGAAAGGCGAGCGGCT...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATCAGCCCTGGCCCAGCTaGACCTCCAGCCGCAGCGAC +
Preference number: 5 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHQPWPS*TSSRSD
Trigger: GTCGCTGCGGCTGGAGGTCAAGCTGGGCCAGGGCTG...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGGGGGAATTTGGCACCTaGCCGCGCCGTGTACTCATT +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWGEFGT*PRRVLI
Trigger: AATGAGTACACGGCGCGGCAAGGTGCCAAATTCCCC...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCATCCTCAGACCCCTaGTTTCCTGGGCTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRASSDP*FPGLSQ
Trigger: CTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGC...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS CCA 90 bp CTTCTTGGAGGGGGCACTCAAGAGGCCAGAACTGGCTGCACCAGATaGGTCTGGGTGCTTGAGGACCAAGGGTGTGGGGAGGCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LLGGGTQEARTGCTR*VWVLEDQGCGEAGG
Trigger: CCCTCCCGCCTCCCCACACCCTTGGTCCTCAAGCACCCAGACCCATCTGGTGCAGCCAGTTCTGGCCTCTTGAGTGCCCCCTCCAAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467556.1
CDS CCA 90 bp CTTCTGCCCACTCACAGTGCTTCTCCCTGGATATGGCTGGGGCGCTaGACAGCCAGACCTCCCACCCCAGCCCAGGAGAGGCACTCTGCA +
Preference number: 5 (lower is better)
Translates to: LLPTHSASPWIWLGR*TARPPTPAQERHSA
Trigger: TGCAGAGTGCCTCTCCTGGGCTGGGGTGGGAGGTCTGGCTGTCCAGCGCCCCAGCCATATCCAGGGAGAAGCACTGTGAGTGGGCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472968.1
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCCTTGGGCTTGCTCTaGTTGCTACCCATGGTCCTG +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWSLGLL*LLPMVL
Trigger: CAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGA...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS-3UTR CAA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCACGGTGTCCGAGGAGTaGAAGCCTCCGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPTVSEE*KPPNSL
Trigger: CAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCGT...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCAGCCCTGGCCCAGCTaGACCTCCAGCCGCAGCGAC +
Preference number: 5 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPQPWPS*TSSRSD
Trigger: GTCGCTGCGGCTGGAGGTCAAGCTGGGCCAGGGCTG...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCCAGCAAACTCCCCTaGCTCATGTACTCCGTGACG +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWSSKLP*LMYSVT
Trigger: CGTCACGGAGTACATGAGCAAGGGGAGTTTGCTGGA...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTGGCAGCCGCAGGTACTaGCCTGTCTCCCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSGSRRY*PVSPLR
Trigger: TCTCAAGGGGGAGACAGGCAAGTACCTGCGGCTGCC...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCGGGGAATTTGGCACCTaGCCGCGCCGTGTACTCATT +
Preference number: 5 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPGEFGT*PRRVLI
Trigger: AATGAGTACACGGCGCGGCAAGGTGCCAAATTCCCC...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCCCATCGCTCCTCTTaGGAAAGGCTCTTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRAHRSS*ERLFGQ
Trigger: CTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGC...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCGCCCATCGCTCCTCTTaGGAAAGGCTCTTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPAHRSS*ERLFGQ
Trigger: CTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGC...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTTTAAAGGGTGCCGACTaGGGGAGGAGAACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: CRERRAATAGAGQSHRAGLKGAD*GRRTGP
Trigger: TGGCCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAA...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTATAGGCAGGCACTGCTaGGCCTCCTTCCCCACTGGC +
Preference number: 5 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSIGRHC*ASFPTG
Trigger: GCCAGTGGGGAAGGAGGCCAAGCAGTGCCTGCCTAT...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCATGTCGTGGCCAGAGTaGACTCCGGTGCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPMSWPE*TPVHRC
Trigger: ACACCTGTGCACCGGAGTCAACTCTGGCCACGACAT...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS GCA 90 bp CGGCGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTTGGGCTTaGTCTTGTTGCTACCCATGGTCCTTTTTGGGAGAGTTAGCCTCT +
Preference number: 5 (lower is better)
Translates to: RRAPGCGAAGWHPWA*SCCYPWSFLGELAS
Trigger: AGAGGCTAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS CCA 90 bp CCTGGTAGAAGGCAGGGGCTGTCCCAGAGGACCTGGGAGGCAGCCTaGGGTCTTGGCACAAACACCAGGTGTGGAGTCAGGGGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: PGRRQGLSQRTWEAA*GLGTNTRCGVRGLE
Trigger: TTCGAGACCCCTGACTCCACACCTGGTGTTTGTGCCAAGACCCCAGGCTGCCTCCCAGGTCCTCTGGGACAGCCCCTGCCTTCTACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373578.7
ENST00000497734.5
CDS-3UTR CAA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGTCGGCCGAGGCTGGCTaGCTGGGGGTCTGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLSAEAG*LGVCEA
Trigger: CGCCTCGCAGACCCCCAGCAAGCCAGCCTCGGCCGA...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCAGTCTCCCTCTGTGTaGTTGACAATCTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRQSPSV*LTIWSR
Trigger: GCGGCTCCAGATTGTCAACAACACAGAGGGAGACTG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTTTGAGGCCCTTGGCGTaGTCGAAGTCAGACACTGAG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRLRPLA*SKSDTE
Trigger: CTCAGTGTCTGACTTCGACAACGCCAAGGGCCTCAA...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCGGCAGCCGCAGGTACTaGCCTGTCTCCCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGGSRRY*PVSPLR
Trigger: TCTCAAGGGGGAGACAGGCAAGTACCTGCGGCTGCC...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGGATGCCTCCGACGAATaGTTGGTTCCTGAGGATGAC +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWDASDE*LVPEDD
Trigger: GTCATCCTCAGGAACCAACAATTCGTCGGAGGCATC...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCACACACAGGGACCCTaGGCAAGATGCCACAAACTG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRHTQGP*ARCHKL
Trigger: CAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGTG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACCACACACAGGGACCCTaGGCAAGATGCCACAAACTG +
Preference number: 5 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYHTQGP*ARCHKL
Trigger: CAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGTG...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTCTCGCATACCCCACACACAGGGACCCTaGGCAAGATGCCACAAACTG +
Preference number: 5 (lower is better)
Translates to: ACGHSGSWTESPCWSRIPHTQGP*ARCHKL
Trigger: CAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGTG...GGGTATGCGAGACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGAAGGGCCTTAGGCAGTaGGAGAGGGATTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWKGLRQ*ERDLRA
Trigger: AGCTCTCAAATCCCTCTCCAACTGCCTAAGGCCCTT...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCCCGCAAGTCTGGGCCTaGGAATTTCGGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGPQVWA*EFRSPR
Trigger: CCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCGG...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACACCGCAAGTCTGGGCCTaGGAATTTCGGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTPQVWA*EFRSPR
Trigger: CCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCGG...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCCCTCAAGGGGTAGTTaGTTCTCGCATTCCGCCCCA +
Preference number: 5 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSPSRGS*FSHSAP
Trigger: TGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTACCTTCCTCGTGTTGTaGACAATCTGGAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRTFLVL*TIWSRS
Trigger: CGAGCGGCTCCAGATTGTCAACAACACGAGGAAGGT...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373558.2
CDS TCA 90 bp GGTCAAAGGGGAGGCACGAGATCCGATGCAGCCAGGAAAGCGAGGTaGCCAGGGAAAGAGGCCCCAGCGGACCCAGACACAGATGAGTGC +
Preference number: 5 (lower is better)
Translates to: GQRGGTRSDAARKAR*PGKEAPADPDTDEC
Trigger: GCACTCATCTGTGTCTGGGTCCGCTGGGGCCTCTTTCCCTGGTCACCTCGCTTTCCTGGCTGCATCGGATCTCGTGCCTCCCCTTTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477475.1
CDS GCA 90 bp CAAGGCAGGCTTCTTGGAGGGGGCACTCAAGAGGCCAGAACTGGCTaGACCAGATGGGTCTGGGTGCTTGAGGACCAAGGGTGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: QGRLLGGGTQEARTG*TRWVWVLEDQGCGE
Trigger: CTCCCCACACCCTTGGTCCTCAAGCACCCAGACCCATCTGGTGCAGCCAGTTCTGGCCTCTTGAGTGCCCCCTCCAAGAAGCCTGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467556.1
CDS GCA 90 bp GCAGAGGGCAGAAGGCAAAGGTCAAAGGGGAGGCACGAGATCCGATaGAGCCAGGAAAGCGAGGTGACCAGGGAAAGAGGCCCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: AEGRRQRSKGRHEIR*SQESEVTRERGPSG
Trigger: TCCGCTGGGGCCTCTTTCCCTGGTCACCTCGCTTTCCTGGCTGCATCGGATCTCGTGCCTCCCCTTTGACCTTTGCCTTCTGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477475.1
CDS CCA 90 bp CGTTCTCGGCGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTTaGGCTTGCTCTTGTTGCTACCCATGGTCCTTTTTGGGAGAGTTA +
Preference number: 5 (lower is better)
Translates to: RSRRAPGCGAAGWHP*ACSCCYPWSFLGEL
Trigger: TAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGAGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS-3UTR CAA 90 bp TGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGTTTGGGCTTGCTCTTGTaGCTACCCATGGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: CRERRAATAGAGQSHRAGLGLLL*LPMVLV
Trigger: TACCAGGACCATGGGTAGCAACAAGAGCAAGCCCAA...ACCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS-3UTR CAA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATTCGGCCGAGGCTGGCTaGCTGGGGGTCTGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDSAEAG*LGVCEA
Trigger: CGCCTCGCAGACCCCCAGCAAGCCAGCCTCGGCCGA...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGGGCAGCCGCAGGTACTaGCCTGTCTCCCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREGSRRY*PVSPLR
Trigger: TCTCAAGGGGGAGACAGGCAAGTACCTGCGGCTGCC...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCCACTTGATGGGGAATTaGGCACCTTGCCGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGHLMGN*APCRAV
Trigger: CACGGCGCGGCAAGGTGCCAAATTCCCCATCAAGTG...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGCTGGCTTTGGAAAGGCTCTTaGGCCAGCTCTCGACATAGA +
Preference number: 5 (lower is better)
Translates to: VQGEACGHSGSWTESPCWLWKGS*ASSRHR
Trigger: TCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAG...CCAGCACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTCTGCCTACGCCTCCGACGAATTGTaGGTTCCTGAGGATGACAGA +
Preference number: 5 (lower is better)
Translates to: AAQPGSSGRGSVSAASAYASDEL*VPEDDR
Trigger: TCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGC...GTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCGCATCCTCAGACCCCTaGTTTCCTGGGCTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGASSDP*FPGLSQ
Trigger: CTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGC...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTCTCTTCTATGTCTGCTaGATTGCCTCCAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHRLFYVC*IASRAE
Trigger: CTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGAG...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGAGTGCAGGGAGAGGCGTGCGGCCACAGCGGGAGCTGGACAGAGTCACCGTGAACAGGGCCAGGAATaGAAATGCCACGGGACAAAG +
Preference number: 5 (lower is better)
Translates to: RECRERRAATAGAGQSHREQGQE*KCHGTK
Trigger: CTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTTC...ACGGTGACTCTGTCCAGCTCCCGCTGTGGCCGCACGCCTCTCCCTGCACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTTTAAAGGGTGCCGACTaGGGGAGGAGAACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSLKGAD*GRRTGP
Trigger: TGGCCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAA...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCAGCCCTGGCCCAGCTaGACCTCCAGCCGCAGCGAC +
Preference number: 5 (lower is better)
Translates to: TLFPPHELKGADLGRRTGQPWPS*TSSRSD
Trigger: GTCGCTGCGGCTGGAGGTCAAGCTGGGCCAGGGCTG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACACCAGGCTTCAGGGTTTaGATGGCCACCCTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTPGFRV*MATLVV
Trigger: TACCACCAGGGTGGCCATCAAAACCCTGAAGCCTGG...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCTTGCCTGTCTCCCCCTaGAGAAAGTCCAGCAAACTC +
Preference number: 5 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSLPVSP*RKSSKL
Trigger: GAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCAA...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAGGGGAATTTGGCACCTaGCCGCGCCGTGTACTCATT +
Preference number: 5 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTGEFGT*PRRVLI
Trigger: AATGAGTACACGGCGCGGCAAGGTGCCAAATTCCCC...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTGCGTTTTCAGGACTTTaGTGGATCGACCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSAFSGL*WIDPAP
Trigger: GGGTGCTGGGTCGATCCACAAAAGTCCTGAAAACGC...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAATGTCGTGGCCAGAGTaGACTCCGGTGCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTMSWPE*TPVHRC
Trigger: ACACCTGTGCACCGGAGTCAACTCTGGCCACGACAT...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS TCA 90 bp ATCCTGGCTCTGTCTCTCATAGCTGGGCAAGTTGCTTCACTTCTCTaGGCTTCTGTTCTCTGTTCTGGGCCGGCGGGCGGGCGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: ILALSLIAGQVASLL*ASVLCSGPAGGRAH
Trigger: GTGAGCCCGCCCGCCCGCCGGCCCAGAACAGAGAACAGAAGCTCAGAGAAGTGAAGCAACTTGCCCAGCTATGAGAGACAGAGCCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCGCTGGCTGGCATCCTaGGGCTTGCTCTTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRERWLAS*GLLLLL
Trigger: TAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTCTCCCTCTGTGTTGTaGACAATCTGGAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGSPSVL*TIWSRS
Trigger: CGAGCGGCTCCAGATTGTCAACAACACAGAGGGAGA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTCCAGCAAACTCCCCTaGCTCATGTACTCCGTGACG +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGSSKLP*LMYSVT
Trigger: CGTCACGGAGTACATGAGCAAGGGGAGTTTGCTGGA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGCACTTGATGGGGAATTaGGCACCTTGCCGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGHLMGN*APCRAV
Trigger: CACGGCGCGGCAAGGTGCCAAATTCCCCATCAAGTG...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AAGGCCTTGTGCTGCCCAGCCTGGAAGCAGCGGCAGAGGGTCTGTCTCGGCAGCCTTTGGAAAGGCTCTTaGGCCAGCTCTCGACATAGA +
Preference number: 5 (lower is better)
Translates to: KALCCPAWKQRQRVCLGSLWKGS*ASSRHR
Trigger: TCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAG...GCTGCCGAGACAGACCCTCTGCCGCTGCTTCCAGGCTGGGCAGCACAAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTGCCTCCGACGAATTGTaGGTTCCTGAGGATGACAGA +
Preference number: 5 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSASDEL*VPEDDR
Trigger: TCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGC...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTGATGCCTCCGACGAATaGTTGGTTCCTGAGGATGAC +
Preference number: 5 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSDASDE*LVPEDD
Trigger: GTCATCCTCAGGAACCAACAATTCGTCGGAGGCATC...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTCACCCACAAGCCGATaGAAGCCTCTCTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGSPTSR*KPLSPH
Trigger: GTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTGA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATCCCTCAAGGGGTAGTTaGTTCTCGCATTCCGCCCCA +
Preference number: 5 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHPSRGS*FSHSAP
Trigger: TGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS GCA 90 bp CCAGGCTGCGGCGCCGCTGGCTGGCATCCTTGGGCTTGCTCTTGTTaGTACCCATGGTCCTTTTTGGGAGAGTTAGCCTCTCAAAACCTC +
Preference number: 5 (lower is better)
Translates to: PGCGAAGWHPWACSC*YPWSFLGELASQNL
Trigger: GAGGTTTTGAGAGGCTAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS GCA 90 bp TCCCACAGTAAGTCAGTGACCCCTGATGCCCAGGTAAGGGCCTTCTaGTGCCCAGAATCACCCCTCAGGGCACCTGTAAGCAGACCTGGT +
Preference number: 5 (lower is better)
Translates to: SHSKSVTPDAQVRAF*CPESPLRAPVSRPG
Trigger: ACCAGGTCTGCTTACAGGTGCCCTGAGGGGTGATTCTGGGCAGCAGAAGGCCCTTACCTGGGCATCAGGGGTCACTGACTTACTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467556.1
CDS GCA 90 bp CACAGTAAGTCAGTGACCCCTGATGCCCAGGTAAGGGCCTTCTGCTaGCCAGAATCACCCCTCAGGGCACCTGTAAGCAGACCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: HSKSVTPDAQVRAFC*PESPLRAPVSRPEQ
Trigger: CTGCTCAGGTCTGCTTACAGGTGCCCTGAGGGGTGATTCTGGGCAGCAGAAGGCCCTTACCTGGGCATCAGGGGTCACTGACTTACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477475.1
CDS GCA 90 bp TCCCACAGTAAGTCAGTGACCCCTGATGCCCAGGTAAGGGCCTTCTaGTGCCCAGAATCACCCCTCAGGGCACCTGTAAGCAGACCTGAG +
Preference number: 5 (lower is better)
Translates to: SHSKSVTPDAQVRAF*CPESPLRAPVSRPE
Trigger: CTCAGGTCTGCTTACAGGTGCCCTGAGGGGTGATTCTGGGCAGCAGAAGGCCCTTACCTGGGCATCAGGGGTCACTGACTTACTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477475.1
CDS GCA 90 bp CTTTGTTTTACGGGTGGGGAAACAGGCCCAGCAGGAGTCATGACTTaGCCAAGGCCACCAGGGCAGAGGGATTCAGGGACCACAGACAGG +
Preference number: 5 (lower is better)
Translates to: LCFTGGETGPAGVMT*PRPPGQRDSGTTDR
Trigger: CCTGTCTGTGGTCCCTGAATCCCTCTGCCCTGGTGGCCTTGGGCAAGTCATGACTCCTGCTGGGCCTGTTTCCCCACCCGTAAAACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493775.1
CDS-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCAGGCAGCCTGGGGTCTaGGCACAAACACCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSRQPGV*AQTPGV
Trigger: CACACCTGGTGTTTGTGCCAAGACCCCAGGCTGCCT...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGCTGGCATCCTTGGGCTaGCTCTTGTTGCTACCCATG +
Preference number: 5 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRELASLG*LLLLPM
Trigger: CATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAG...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATTCTCCCTCTGTGTTGTaGACAATCTGGAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHSPSVL*TIWSRS
Trigger: CGAGCGGCTCCAGATTGTCAACAACACAGAGGGAGA...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGTTCACGTTGAGGCCCTaGGCGTTGTCGAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREFTLRP*ALSKSD
Trigger: GTCTGACTTCGACAACGCCAAGGGCCTCAACGTGAA...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTTCACGTTGAGGCCCTaGGCGTTGTCGAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGFTLRP*ALSKSD
Trigger: GTCTGACTTCGACAACGCCAAGGGCCTCAACGTGAA...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTCTCCCACCAGGATGTaGGCTGCACGAAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: WESAISNASSDPLFPGLSSPTRM*AARRSR
Trigger: CCGGGACCTTCGTGCAGCCAACATCCTGGTGGGAGA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCTCTCCCACCAGGATGTaGGCTGCACGAAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFSPTRM*AARRSR
Trigger: CCGGGACCTTCGTGCAGCCAACATCCTGGTGGGAGA...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGCACTTGATGGGGAATTaGGCACCTTGCCGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVHLMGN*APCRAV
Trigger: CACGGCGCGGCAAGGTGCCAAATTCCCCATCAAGTG...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGCGGGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCTTTGGAAAGGCTCTTaGGCCAGCTCTCGACATAGA +
Preference number: 5 (lower is better)
Translates to: RRGQGPIAPLWKGSLASSLWKGS*ASSRHR
Trigger: TCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAG...AGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCGCCCATCGCTCCTCTTaGGAAAGGCTCTTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPAHRSS*ERLFGQ
Trigger: CTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGC...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACAAAGGGCCTTAGGCAGTaGGAGAGGGATTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: GPGAHRSSLERLFGQLSTKGLRQ*ERDLRA
Trigger: AGCTCTCAAATCCCTCTCCAACTGCCTAAGGCCCTT...TGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGCCCTCAAGGGGTAGTTaGTTCTCGCATTCCGCCCCA +
Preference number: 5 (lower is better)
Translates to: SLLFGKALWPALDIDRGWPSRGS*FSHSAP
Trigger: TGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCCTCAAGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACCGCTGGCTGGCATCCTaGGGCTTGCTCTTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: PSRGSLFSHSAPSRFPAHRWLAS*GLLLLL
Trigger: TAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCG...GTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGAACGGTGTCCGAGGAGTaGAAGCCTCCGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGTVSEE*KPPNSL
Trigger: CAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCGT...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCAGCCGCTCGCCTTTCTaGAAGGACAGGTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSSRSPF*KDRSVS
Trigger: GGAGACAGACCTGTCCTTCAAGAAAGGCGAGCGGCT...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTCCCGTCTGGTGATCTaGCCAAAATACCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGSRLVI*PKYHSS
Trigger: TGAGGAGTGGTATTTTGGCAAGATCACCAGACGGGA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGTTGAGGCCCTTGGCGTaGTCGAAGTCAGACACTGAG +
Preference number: 5 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTLRPLA*SKSDTE
Trigger: CTCAGTGTCTGACTTCGACAACGCCAAGGGCCTCAA...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CATGCTCAGGGAAGTCCTGTGATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCTTCACGTTGAGGCCCTaGGCGTTGTCGAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: HAQGSPVMCLVLLPGAHPFTLRP*ALSKSD
Trigger: GTCTGACTTCGACAACGCCAAGGGCCTCAACGTGAA...GGGGTGAGCACCTGGGAGAAGGACAAGGCACATCACAGGACTTCCCTGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCCAGGCTTCAGGGTTTaGATGGCCACCCTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSPGFRV*MATLVV
Trigger: TACCACCAGGGTGGCCATCAAAACCCTGAAGCCTGG...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGACCAGGGTCCAGCAAACTCCCCTaGCTCATGTACTCCGTGACG +
Preference number: 5 (lower is better)
Translates to: PGIEMPRDKVRGRRPGPGSSKLP*LMYSVT
Trigger: CGTCACGGAGTACATGAGCAAGGGGAGTTTGCTGGA...CCCTGGTCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGCCAGGGGCCCATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATGCCTCCGACGAATTGTaGGTTCCTGAGGATGACAGA +
Preference number: 5 (lower is better)
Translates to: GQGPIAPLWKGSLASSRHASDEL*VPEDDR
Trigger: TCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGC...ATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGATGGGCCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGGATGCCTCCGACGAATaGTTGGTTCCTGAGGATGAC +
Preference number: 5 (lower is better)
Translates to: MPPKRKGLAPGNSAPQREDASDE*LVPEDD
Trigger: GTCATCCTCAGGAACCAACAATTCGTCGGAGGCATC...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCTTAAAGGGTGCCGACTaGGGGAGGAGAACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSLKGAD*GRRTGP
Trigger: TGGCCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAA...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGCACACACAGGGACCCTaGGCAAGATGCCACAAACTG +
Preference number: 5 (lower is better)
Translates to: SLLFGKALWPALDIDRGWHTQGP*ARCHKL
Trigger: CAGTTTGTGGCATCTTGCCAAGGGTCCCTGTGTGTG...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATATAGGCAGGCACTGCTaGGCCTCCTTCCCCACTGGC +
Preference number: 5 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDIGRHC*ASFPTG
Trigger: GCCAGTGGGGAAGGAGGCCAAGCAGTGCCTGCCTAT...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATATAGGCAGGCACTGCTaGGCCTCCTTCCCCACTGGC +
Preference number: 5 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDIGRHC*ASFPTG
Trigger: GCCAGTGGGGAAGGAGGCCAAGCAGTGCCTGCCTAT...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCCGCAAGTCTGGGCCTaGGAATTTCGGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: TLFPPHELKGADLGRRTGPQVWA*EFRSPR
Trigger: CCTGGGGCTCCGAAATTCCAAGGCCCAGACTTGCGG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS TCA 90 bp AACTTCTTTGTTTTACGGGTGGGGAAACAGGCCCAGCAGGAGTCATaGCTTGCCCAAGGCCACCAGGGCAGAGGGATTCAGGGACCACAG +
Preference number: 5 (lower is better)
Translates to: NFFVLRVGKQAQQES*LAQGHQGRGIQGPQ
Trigger: CTGTGGTCCCTGAATCCCTCTGCCCTGGTGGCCTTGGGCAAGTCATGACTCCTGCTGGGCCTGTTTCCCCACCCGTAAAACAAAGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493775.1
CDS GCA 90 bp CACAGTAAGTCAGTGACCCCTGATGCCCAGGTAAGGGCCTTCTGCTaGCCAGAATCACCCCTCAGGGCACCTGTAAGCAGACCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: HSKSVTPDAQVRAFC*PESPLRAPVSRPGK
Trigger: TTTACCAGGTCTGCTTACAGGTGCCCTGAGGGGTGATTCTGGGCAGCAGAAGGCCCTTACCTGGGCATCAGGGGTCACTGACTTACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467556.1
CDS-3UTR CAA 90 bp TCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGTTGGGCTTGCTCTTGTaGCTACCCATGGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: SLLFGKALWPALDIDRGWLGLLL*LPMVLV
Trigger: TACCAGGACCATGGGTAGCAACAAGAGCAAGCCCAA...CCACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCTGGCATCCTTGGGCTaGCTCTTGTTGCTACCCATG +
Preference number: 5 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSLASLG*LLLLPM
Trigger: CATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAG...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGAGCCGCTCGCCTTTCTaGAAGGACAGGTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLSRSPF*KDRSVS
Trigger: GGAGACAGACCTGTCCTTCAAGAAAGGCGAGCGGCT...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGCAGTCTCCCTCTGTGTaGTTGACAATCTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVQSPSV*LTIWSR
Trigger: GCGGCTCCAGATTGTCAACAACACAGAGGGAGACTG...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCCAGTCTCCCTCTGTGTaGTTGACAATCTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSQSPSV*LTIWSR
Trigger: GCGGCTCCAGATTGTCAACAACACAGAGGGAGACTG...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGCCACCAAAGAGGAAGGGCCTCGCCCCTGGCAATTCAGCCCCACAGAGAGAGTCCCGTCTGGTGATCTaGCCAAAATACCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: MPPKRKGLAPGNSAPQRESRLVI*PKYHSS
Trigger: TGAGGAGTGGTATTTTGGCAAGATCACCAGACGGGA...CTCTCTCTGTGGGGCTGAATTGCCAGGGGCGAGGCCCTTCCTCTTTGGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGTTGAGGCCCTTGGCGTaGTCGAAGTCAGACACTGAG +
Preference number: 5 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVLRPLA*SKSDTE
Trigger: CTCAGTGTCTGACTTCGACAACGCCAAGGGCCTCAA...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ACAGGGCCAGGAATTGAAATGCCACGGGACAAAGTACGGGGAAGGAGGCCAGGATTCACGTTGAGGCCCTaGGCGTTGTCGAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: TGPGIEMPRDKVRGRRPGFTLRP*ALSKSD
Trigger: GTCTGACTTCGACAACGCCAAGGGCCTCAACGTGAA...TCCTGGCCTCCTTCCCCGTACTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGCTCTTCTATGTCTGCTaGATTGCCTCCAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTLFYVC*IASRAE
Trigger: CTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGAG...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGATGCCTCCGACGAAGGGCCTTAGGCAGTaGGAGAGGGATTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: PQTPCFLGCPSLSMMPPTKGLRQ*ERDLRA
Trigger: AGCTCTCAAATCCCTCTCCAACTGCCTAAGGCCCTT...CGTCGGAGGCATCATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCATGTCGTGGCCAGAGTaGACTCCGGTGCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFMSWPE*TPVHRC
Trigger: ACACCTGTGCACCGGAGTCAACTCTGGCCACGACAT...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCGCTGGCTGGCATCCTaGGGCTTGCTCTTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: TLFPPHELKGADLGRRTGRWLAS*GLLLLL
Trigger: TAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCAAGATCCAGGCTTCAGGGTTTaGATGGCCACCCTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GDTHTCTHIHTHRDPWQDPGFRV*MATLVV
Trigger: TACCACCAGGGTGGCCATCAAAACCCTGAAGCCTGG...ATCTTGCCAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGGGGAATTTGGCACCTaGCCGCGCCGTGTACTCATT +
Preference number: 5 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDGEFGT*PRRVLI
Trigger: AATGAGTACACGGCGCGGCAAGGTGCCAAATTCCCC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTCACCCACAAGCCGATaGAAGCCTCTCTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: WESAISNASSDPLFPGLSSPTSR*KPLSPH
Trigger: GTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTGA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATGTGCCTTGTCCTTCTCCCAGGTGCTCACCCCCTAACACAGGTGCAGATGTTCTCACCCACAAGCCGATaGAAGCCTCTCTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: MCLVLLPGAHPLTQVQMFSPTSR*KPLSPH
Trigger: GTGTGGAGAGAGAGGCTTCAATCGGCTTGTGGGTGA...GAACATCTGCACCTGTGTTAGGGGGTGAGCACCTGGGAGAAGGACAAGGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ATCGCTCCTCTTTGGAAAGGCTCTTTGGCCAGCTCTCGACATAGACCGGGGGTGGAACAGGGCCAGGAATaGAAATGCCACGGGACAAAG +
Preference number: 5 (lower is better)
Translates to: IAPLWKGSLASSRHRPGVEQGQE*KCHGTK
Trigger: CTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTTC...CACCCCCGGTCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAGAGGAGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGTTAAAGGGTGCCGACTaGGGGAGGAGAACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: TLFPPHELKGADLGRRTGLKGAD*GRRTGP
Trigger: TGGCCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAA...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GTCTCGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGATCCACCACGGACATTaGAGTCCTGAACTTGTCATG +
Preference number: 5 (lower is better)
Translates to: VSAASAYRCFQNGWQGAGIHHGH*SPELVM
Trigger: CATGACAAGTTCAGGACTCAAATGTCCGTGGTGGAT...CCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCTCCACCTTCCTCGTGTaGTTGACAATCTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFSTFLV*LTIWSR
Trigger: GCGGCTCCAGATTGTCAACAACACGAGGAAGGTGGA...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373558.2
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCTGGCATCCTTGGGCTaGCTCTTGTTGCTACCCATG +
Preference number: 5 (lower is better)
Translates to: TLFPPHELKGADLGRRTGLASLG*LLLLPM
Trigger: CATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp AGGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGACTGGCATCCTTGGGCTaGCTCTTGTTGCTACCCATG +
Preference number: 5 (lower is better)
Translates to: RGSLFSHSAPSRFPAHSRLASLG*LLLLPM
Trigger: CATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAG...TCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGTCTCCCTCTGTGTTGTaGACAATCTGGAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: TLFPPHELKGADLGRRTGSPSVL*TIWSRS
Trigger: CGAGCGGCTCCAGATTGTCAACAACACAGAGGGAGA...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCTCCCGTCTGGTGATCTaGCCAAAATACCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSSRLVI*PKYHSS
Trigger: TGAGGAGTGGTATTTTGGCAAGATCACCAGACGGGA...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATTCCAGCAAACTCCCCTaGCTCATGTACTCCGTGACG +
Preference number: 5 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDSSKLP*LMYSVT
Trigger: CGTCACGGAGTACATGAGCAAGGGGAGTTTGCTGGA...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCTTGCCTGTCTCCCCCTaGAGAAAGTCCAGCAAACTC +
Preference number: 5 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFLPVSP*RKSSKL
Trigger: GAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCAA...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGGCCTCCGACGAATTGTaGGTTCCTGAGGATGACAGA +
Preference number: 5 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLASDEL*VPEDDR
Trigger: TCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGC...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGCGTTTTCAGGACTTTaGTGGATCGACCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDAFSGL*WIDPAP
Trigger: GGGTGCTGGGTCGATCCACAAAAGTCCTGAAAACGC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS TCA 90 bp AACACGTCTGCTAAGCGACTAAATGACCTTTACAGAGACGACAACTaGGGCCCGAGGTCCCACAGTAAGTCAGTGACCCCTGATGCCCAG +
Preference number: 5 (lower is better)
Translates to: NTSAKRLNDLYRDDN*GPRSHSKSVTPDAQ
Trigger: CTGGGCATCAGGGGTCACTGACTTACTGTGGGACCTCGGGCCTCAGTTGTCGTCTCTGTAAAGGTCATTTAGTCGCTTAGCAGACGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477475.1
CDS-3UTR CAA 90 bp CGCACATGGAGACACGCACACATGCACACACATACACACACACAGGGACCCTTGTCCCGTCTGGTGATCTaGCCAAAATACCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: RTWRHAHMHTHTHTQGPLSRLVI*PKYHSS
Trigger: TGAGGAGTGGTATTTTGGCAAGATCACCAGACGGGA...CAAGGGTCCCTGTGTGTGTGTATGTGTGTGCATGTGTGCGTGTCTCCATGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGTTGCCTGTCTCCCCCTaGAGAAAGTCCAGCAAACTC +
Preference number: 5 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMLPVSP*RKSSKL
Trigger: GAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCAA...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CACCCCTGCCCTGCACTCCTAGGAAACACACGAAGAGCACACACAACGGTATTCCTTTGGAAAGGCTCTTaGGCCAGCTCTCGACATAGA +
Preference number: 5 (lower is better)
Translates to: HPCPALLGNTRRAHTTVFLWKGS*ASSRHR
Trigger: TCTATGTCGAGAGCTGGCCAAAGAGCCTTTCCAAAG...GAATACCGTTGTGTGTGCTCTTCGTGTGTTTCCTAGGAGTGCAGGGCAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCCTCATGAGTTAAAGGGTGCCGACTTGGGGAGGAGAACAGGGCTCTTCTATGTCTGCTaGATTGCCTCCAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: TLFPPHELKGADLGRRTGLFYVC*IASRAE
Trigger: CTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGAG...CCCTGTTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGGAAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGCTCTTCTATGTCTGCTaGATTGCCTCCAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMLFYVC*IASRAE
Trigger: CTCGGCTCTGGAGGCAATCAAGCAGACATAGAAGAG...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATGAACAGGGCCAGGAATaGAAATGCCACGGGACAAAG +
Preference number: 5 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDEQGQE*KCHGTK
Trigger: CTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTTC...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CCAGGGCCTCCTGGACTCTTGGCTCTTCTATGTCTGCTTGATTGCCTCCAGAGCATCCACCACGGACATTaGAGTCCTGAACTTGTCATG +
Preference number: 5 (lower is better)
Translates to: PGPPGLLALLCLLDCLQSIHHGH*SPELVM
Trigger: CATGACAAGTTCAGGACTCAAATGTCCGTGGTGGAT...GCTCTGGAGGCAATCAAGCAGACATAGAAGAGCCAAGAGTCCAGGAGGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CGGCAGCCTCTGCCTACAGGTGTTTCCAGAATGGATGGCAAGGGGCAGGGTGGCTGTTTGTATAGACGGTaGCAAATCAACCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: RQPLPTGVSRMDGKGQGGCLYRR*QINLQD
Trigger: GTCTTGAAGGTTGATTTGCAACCGTCTATACAAACA...GCCACCCTGCCCCTTGCCATCCATTCTGGAAACACCTGTAGGCAGAGGCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGCGCTGGCTGGCATCCTaGGGCTTGCTCTTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRRWLAS*GLLLLL
Trigger: TAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCG...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp CACGAAGAGCACACACAACGGTATTCTCGTCGTGTATTTGTGATCTCCTCTAGGACGGTGTCCGAGGAGTaGAAGCCTCCGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: HEEHTQRYSRRVFVISSRTVSEE*KPPNSL
Trigger: CAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCGT...CCTAGAGGAGATCACAAATACACGACGAGAATACCGTTGTGTGTGCTCTTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCGAACAGGGCCAGGAATaGAAATGCCACGGGACAAAG +
Preference number: 5 (lower is better)
Translates to: SFHDASDELLVPEDDRGSEQGQE*KCHGTK
Trigger: CTTTGTCCCGTGGCATTTCAATTCCTGGCCCTGTTC...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGACGGTGTCCGAGGAGTaGAAGCCTCCGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLTVSEE*KPPNSL
Trigger: CAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCGT...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGAGCCGCTCGCCTTTCTaGAAGGACAGGTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLSRSPF*KDRSVS
Trigger: GGAGACAGACCTGTCCTTCAAGAAAGGCGAGCGGCT...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GGGGTAGTTTGTTCTCGCATTCCGCCCCATCTCGCTTTCCAGCACACAGTAGATTTGGGCTTGCTCTTGTaGCTACCCATGGTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: GVVCSRIPPHLAFQHTVDLGLLL*LPMVLF
Trigger: AAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAA...ATCTACTGTGTGCTGGAAAGCGAGATGGGGCGGAATGCGAGAACAAACTACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS-3UTR CAA 90 bp TCTTTCCATGATGCCTCCGACGAATTGTTGGTTCCTGAGGATGACAGAGGGAGCATCCACCACGGACATTaGAGTCCTGAACTTGTCATG +
Preference number: 5 (lower is better)
Translates to: SFHDASDELLVPEDDRGSIHHGH*SPELVM
Trigger: CATGACAAGTTCAGGACTCAAATGTCCGTGGTGGAT...GCTCCCTCTGTCATCCTCAGGAACCAACAATTCGTCGGAGGCATCATGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp GACAGTATTAAGACACCTTACACAAAGGGCCTTAGGCAGTTGGAGAGGGATTTGTCCTTGGGCTTGCTCTaGTTGCTACCCATGGTCCTT +
Preference number: 5 (lower is better)
Translates to: DSIKTPYTKGLRQLERDLSLGLL*LLPMVL
Trigger: AAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGA...CAAATCCCTCTCCAACTGCCTAAGGCCCTTTGTGTAAGGTGTCTTAATACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS-3UTR CAA 90 bp TGGGAATCTGCCATCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCTGTTTGTATAGACGGTaGCAAATCAACCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: WESAISNASSDPLFPGLSCLYRR*QINLQD
Trigger: GTCTTGAAGGTTGATTTGCAACCGTCTATACAAACA...GGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGATGGCAGATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS-3UTR CAA 90 bp TCTCGAATGCATCCTCAGACCCCTTGTTTCCTGGGCTGTCCCAGTCTTTCCATGTGTTTGTATAGACGGTaGCAAATCAACCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SRMHPQTPCFLGCPSLSMCLYRR*QINLQD
Trigger: GTCTTGAAGGTTGATTTGCAACCGTCTATACAAACA...CATGGAAAGACTGGGACAGCCCAGGAAACAAGGGGTCTGAGGATGCATTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS GCA 72 bp GTCTGCGAGGCGGGGAAAGCGCCCCCGCCAGCGCCGTaGACGTTCTCGGCGGGCTCCAGGCTGCGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: VCEAGKAPPPAP*TFSAGSRLRRR
Trigger: GCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGTGCACGGCGCTGGCGGGGGCGCTTTCCCCGCCTCGCAGAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS TCA 72 bp GCCGCTCCTCAGGCTCCTTCCGCCAGCACTGGCACATaGGGTCGTGCAGGGACTCGGGACACTCCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: AAPQAPSASTGT*GRAGTRDTPAG
Trigger: GCCCGCCGGAGTGTCCCGAGTCCCTGCACGACCTCATGTGCCAGTGCTGGCGGAAGGAGCCTGAGGAGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000477066.5
CDS GCA 72 bp AAGGTGGTCACTCCACCGGCCAGCGGGCCCGCCCTCTaGGGGGAGGTGACGGTGTCCGAGGAGTTGAAGCCT +
Preference number: 6 (lower is better)
Translates to: KVVTPPASGPAL*GEVTVSEELKP
Trigger: AGGCTTCAACTCCTCGGACACCGTCACCTCCCCGCAGAGGGCGGGCCCGCTGGCCGGTGGAGTGACCACCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000472968.1
CDS CCA 72 bp TGCGGCTTGGACGTGGGGCACACGGTGGTGAGGCGGTaGCACAGGCCATCGGCGTGTTCCAGCACGCAAGCC +
Preference number: 6 (lower is better)
Translates to: CGLDVGHTVVRR*HRPSACSSTQA
Trigger: GGCTTGCGTGCTGGAACACGCCGATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCACGTCCAAGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS TCA 72 bp CCTGAGTCTGCGGCTTGGACGTGGGGCACACGGTGGTaGGGCGGTGGCACAGGCCATCGGCGTGTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PESAAWTWGTRW*GGGTGHRRVPA
Trigger: TGCTGGAACACGCCGATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS GCA 72 bp AGGATCCAAGCCGAGAAGCCGGTCTGGGCCCGCCTGTaGCTAGAGGTTCTCCCCGGGCTGGTACTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: RIQAEKPVWARL*LEVLPGLVLGL
Trigger: GAGCCCCAGTACCAGCCCGGGGAGAACCTCTAGGCACAGGCGGGCCCAGACCGGCTTCTCGGCTTGGATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000477066.5
CDS GCA 72 bp GGGCTCCTCAGGGCAGCCCCCTCCATACCAGCCAGCTaGAGAGAAAGGCGGGCAGTGGGACACTGCGTGGAG +
Preference number: 6 (lower is better)
Translates to: GLLRAAPSIPAS*RERRAVGHCVE
Trigger: CTCCACGCAGTGTCCCACTGCCCGCCTTTCTCTGCAGCTGGCTGGTATGGAGGGGGCTGCCCTGAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS CAA 90 bp TCGGCGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTTGGGCTaGCTCTTGTTGCTACCCATGGTCCTGGTAGAAGGCAGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: SAGSRLRRRWLASLG*LLLLPMVLVEGRGC
Trigger: ACAGCCCCTGCCTTCTACCAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS CAA 90 bp CAGCACGCAAGCCCCGCGAGCTCCCTCTGCCGCTCTCTTCCCTCTTaGCTGCAATCGATCTGGCCGCCCCCTCCTCCTCTCCCAGCAACC +
Preference number: 6 (lower is better)
Translates to: QHASPASSLCRSLPS*LQSIWPPPPPLPAT
Trigger: GGTTGCTGGGAGAGGAGGAGGGGGCGGCCAGATCGATTGCAGCAAAGAGGGAAGAGAGCGGCAGAGGGAGCTCGCGGGGCTTGCGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS TCA 72 bp CCTGAGTCTGCGGCTTGGACGTGGGGCACACGGTGGTaGGGCGGTGGCACAGGCCATCGGCGTGTTTGGAGT +
Preference number: 6 (lower is better)
Translates to: PESAAWTWGTRW*GGGTGHRRVWS
Trigger: ACTCCAAACACGCCGATGGCCTGTGCCACCGCCTCACCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
CDS GCA 72 bp CCCGGTGGACGTAGTTCATCCGCTCCACGTACGCCATaGCTGAGGCGATCTGCAGGCGGAACCGTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: PGGRSSSAPRTP*LRRSAGGTVGA
Trigger: GGCTCCCACGGTTCCGCCTGCAGATCGCCTCAGGCATGGCGTACGTGGAGCGGATGAACTACGTCCACCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493775.1
CDS CAA 72 bp GCGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTaGGGCTTGCTCTTGTTGCTACCCATGGTCCTGGTA +
Preference number: 6 (lower is better)
Translates to: AGSRLRRRWLAS*GLLLLLPMVLV
Trigger: TACCAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS CAA 72 bp AGCCCCGCGAGCTCCCTCTGCCGCTCTCTTCCCTCTTaGCTGCAATCGATCTGGCCGCCCCCTCCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: SPASSLCRSLPS*LQSIWPPPPPL
Trigger: GAGAGGAGGAGGGGGCGGCCAGATCGATTGCAGCAAAGAGGGAAGAGAGCGGCAGAGGGAGCTCGCGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477066.5
CDS CAA 90 bp ACGTTCTCGGCGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTaGGGCTTGCTCTTGTTGCTACCCATGGTCCTGGTAGAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: TFSAGSRLRRRWLAS*GLLLLLPMVLVEGR
Trigger: CCTGCCTTCTACCAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS TCA 72 bp GTGGACGTAGTTCATCCGCTCCACGTACGCCATGCCTaGGGCGATCTGCAGGCGGAACCGTGGGAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: VDVVHPLHVRHA*GDLQAEPWEPG
Trigger: GCCAGGCTCCCACGGTTCCGCCTGCAGATCGCCTCAGGCATGGCGTACGTGGAGCGGATGAACTACGTCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493775.1
CDS GCA 72 bp TTCATCCGCTCCACGTACGCCATGCCTGAGGCGATCTaGAGGCGGAACCGTGGGAGCCTGGCTCAGGTGCCA +
Preference number: 6 (lower is better)
Translates to: FIRSTYAMPEAI*RRNRGSLAQVP
Trigger: TGGCACCTGAGCCAGGCTCCCACGGTTCCGCCTGCAGATCGCCTCAGGCATGGCGTACGTGGAGCGGATGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493775.1
CDS GCA 72 bp ACGGGTGGGGAAACAGGCCCAGCAGGAGTCATGACTTaGCCAAGGCCACCAGGGCAGAGGGATTCAGGGACC +
Preference number: 6 (lower is better)
Translates to: TGGETGPAGVMT*PRPPGQRDSGT
Trigger: GGTCCCTGAATCCCTCTGCCCTGGTGGCCTTGGGCAAGTCATGACTCCTGCTGGGCCTGTTTCCCCACCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493775.1
CDS CCA 72 bp CGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTTaGGCTTGCTCTTGTTGCTACCCATGGTCCTTTTTG +
Preference number: 6 (lower is better)
Translates to: RAPGCGAAGWHP*ACSCCYPWSFL
Trigger: CAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS CCA 72 bp GGGGGCACTCAAGAGGCCAGAACTGGCTGCACCAGATaGGTCTGGGTGCTTGAGGACCAAGGGTGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: GGTQEARTGCTR*VWVLEDQGCGE
Trigger: CTCCCCACACCCTTGGTCCTCAAGCACCCAGACCCATCTGGTGCAGCCAGTTCTGGCCTCTTGAGTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467556.1
CDS CAA 72 bp TCCAGGCTGCGGCGCCGCTGGCTGGCATCCTTGGGCTaGCTCTTGTTGCTACCCATGGTCCTGGTAGAAGGC +
Preference number: 6 (lower is better)
Translates to: SRLRRRWLASLG*LLLLPMVLVEG
Trigger: GCCTTCTACCAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358208.8
ENST00000373578.7
CDS CAA 72 bp GCGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTaGGGCTTGCTCTTGTTGCTACCCATGGTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: AGSRLRRRWLAS*GLLLLLPMVLF
Trigger: AAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS CAA 90 bp TCGGCGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTTGGGCTaGCTCTTGTTGCTACCCATGGTCCTTTTTGGGAGAGTTAGCCTC +
Preference number: 6 (lower is better)
Translates to: SAGSRLRRRWLASLG*LLLLPMVLFGRVSL
Trigger: GAGGCTAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS CAA 90 bp ACGTTCTCGGCGGGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTaGGGCTTGCTCTTGTTGCTACCCATGGTCCTTTTTGGGAGAGTT +
Preference number: 6 (lower is better)
Translates to: TFSAGSRLRRRWLAS*GLLLLLPMVLFGRV
Trigger: AACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS TCA 72 bp CCAGGGCAGAGGGATTCAGGGACCACAGACAGGCCATaGGGACCTTCTTACCAGGGTAGGGCACCCGTCCCT +
Preference number: 6 (lower is better)
Translates to: PGQRDSGTTDRP*GPSYQGRAPVP
Trigger: AGGGACGGGTGCCCTACCCTGGTAAGAAGGTCCTCATGGCCTGTCTGTGGTCCCTGAATCCCTCTGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493775.1
CDS GCA 72 bp CCCGGTGGACGTAGTTCATCCGCTCCACGTACGCCATaGCTGAGGCGATCTGAGCAGCCATGTCCACCAGCT +
Preference number: 6 (lower is better)
Translates to: PGGRSSSAPRTP*LRRSEQPCPPA
Trigger: AGCTGGTGGACATGGCTGCTCAGATCGCCTCAGGCATGGCGTACGTGGAGCGGATGAACTACGTCCACCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000477066.5
CDS GCA 72 bp CCAGGCTGCGGCGCCGCTGGCTGGCATCCTTGGGCTTaGTCTTGTTGCTACCCATGGTCCTTTTTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PGCGAAGWHPWA*SCCYPWSFLGE
Trigger: CTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS CCA 72 bp ACTCAAGAGGCCAGAACTGGCTGCACCAGATGGGTCTaGGTGCTTGAGGACCAAGGGTGTGGGGAGGCGGGA +
Preference number: 6 (lower is better)
Translates to: TQEARTGCTRWV*VLEDQGCGEAG
Trigger: TCCCGCCTCCCCACACCCTTGGTCCTCAAGCACCCAGACCCATCTGGTGCAGCCAGTTCTGGCCTCTTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467556.1
CDS CAA 72 bp TCCAGGCTGCGGCGCCGCTGGCTGGCATCCTTGGGCTaGCTCTTGTTGCTACCCATGGTCCTTTTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: SRLRRRWLASLG*LLLLPMVLFGR
Trigger: TCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS GCA 72 bp TCAGTGACCCCTGATGCCCAGGTAAGGGCCTTCTGCTaGCCAGAATCACCCCTCAGGGCACCTGTAAGCAGA +
Preference number: 6 (lower is better)
Translates to: SVTPDAQVRAFC*PESPLRAPVSR
Trigger: TCTGCTTACAGGTGCCCTGAGGGGTGATTCTGGGCAGCAGAAGGCCCTTACCTGGGCATCAGGGGTCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467556.1
ENST00000477475.1
CDS GCA 72 bp AAGTCAGTGACCCCTGATGCCCAGGTAAGGGCCTTCTaGTGCCCAGAATCACCCCTCAGGGCACCTGTAAGC +
Preference number: 6 (lower is better)
Translates to: KSVTPDAQVRAF*CPESPLRAPVS
Trigger: GCTTACAGGTGCCCTGAGGGGTGATTCTGGGCAGCAGAAGGCCCTTACCTGGGCATCAGGGGTCACTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467556.1
ENST00000477475.1
CDS CAA 72 bp CTGCGGCGCCGCTGGCTGGCATCCTTGGGCTTGCTCTaGTTGCTACCCATGGTCCTTTTTGGGAGAGTTAGC +
Preference number: 6 (lower is better)
Translates to: LRRRWLASLGLL*LLPMVLFGRVS
Trigger: GCTAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS CAA 90 bp GGCTCCAGGCTGCGGCGCCGCTGGCTGGCATCCTTGGGCTTGCTCTaGTTGCTACCCATGGTCCTTTTTGGGAGAGTTAGCCTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: GSRLRRRWLASLGLL*LLPMVLFGRVSLSK
Trigger: TTTTGAGAGGCTAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS TCA 72 bp CTGTCTCTCATAGCTGGGCAAGTTGCTTCACTTCTCTaGGCTTCTGTTCTCTGTTCTGGGCCGGCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: LSLIAGQVASLL*ASVLCSGPAGG
Trigger: CCCGCCCGCCGGCCCAGAACAGAGAACAGAAGCTCAGAGAAGTGAAGCAACTTGCCCAGCTATGAGAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373578.7
CDS GCA 72 bp GGCGCCGCTGGCTGGCATCCTTGGGCTTGCTCTTGTTaGTACCCATGGTCCTTTTTGGGAGAGTTAGCCTCT +
Preference number: 6 (lower is better)
Translates to: GAAGWHPWACSC*YPWSFLGELAS
Trigger: AGAGGCTAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS GCA 72 bp AGAAGGCAAAGGTCAAAGGGGAGGCACGAGATCCGATaGAGCCAGGAAAGCGAGGTGACCAGGGAAAGAGGC +
Preference number: 6 (lower is better)
Translates to: RRQRSKGRHEIR*SQESEVTRERG
Trigger: GCCTCTTTCCCTGGTCACCTCGCTTTCCTGGCTGCATCGGATCTCGTGCCTCCCCTTTGACCTTTGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477475.1
CDS CAA 72 bp TCTCGCACGAGGAAGGTCCCTCTCGGGTTCTCTGCATaGAGCAGTAACCGCTCTGACTCCCGTCTGGTGATC +
Preference number: 6 (lower is better)
Translates to: SRTRKVPLGFSA*SSNRSDSRLVI
Trigger: GATCACCAGACGGGAGTCAGAGCGGTTACTGCTCAATGCAGAGAACCCGAGAGGGACCTTCCTCGTGCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000489153.1
CDS TCA 72 bp GCTGAGGCAGCCGCAGGTACTTGCCTGTCTCCCCCTTaGGAAAGTCCAGCAAACTCCCCTTGCTCATGTACT +
Preference number: 6 (lower is better)
Translates to: AEAAAGTCLSPP*ESPANSPCSCT
Trigger: AGTACATGAGCAAGGGGAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCAAGTACCTGCGGCTGCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000467556.1
ENST00000477066.5
ENST00000477475.1
CDS CCA 72 bp GCCAGCCACCAGTCTCCCTCTGTGTTGTTGACAATCTaGAGCCGCTCGCCTTTCTTGAAGGACAGGTCTGTC +
Preference number: 6 (lower is better)
Translates to: ASHQSPSVLLTI*SRSPFLKDRSV
Trigger: GACAGACCTGTCCTTCAAGAAAGGCGAGCGGCTCCAGATTGTCAACAACACAGAGGGAGACTGGTGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358208.8
ENST00000373567.6
ENST00000373578.7
ENST00000472968.1
CDS TCA 72 bp CACGTTGAGGCCCTTGGCGTTGTCGAAGTCAGACACTaGGAGGCAGTAGGCACCTTTCGTGGTCTCACTTTC +
Preference number: 6 (lower is better)
Translates to: HVEALGVVEVRH*EAVGTFRGLTF
Trigger: GAAAGTGAGACCACGAAAGGTGCCTACTGCCTCTCAGTGTCTGACTTCGACAACGCCAAGGGCCTCAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000489153.1
CDS CAA 90 bp GTCTCACTTTCTCGCACGAGGAAGGTCCCTCTCGGGTTCTCTGCATaGAGCAGTAACCGCTCTGACTCCCGTCTGGTGATCTTGCCAAAA +
Preference number: 6 (lower is better)
Translates to: VSLSRTRKVPLGFSA*SSNRSDSRLVILPK
Trigger: TTTTGGCAAGATCACCAGACGGGAGTCAGAGCGGTTACTGCTCAATGCAGAGAACCCGAGAGGGACCTTCCTCGTGCGAGAAAGTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358208.8
ENST00000373558.2
ENST00000373567.6
ENST00000373578.7
ENST00000489153.1
CDS TCA 72 bp GCTAAGCGACTAAATGACCTTTACAGAGACGACAACTaGGGCCCGAGGTCCCACAGTAAGTCAGTGACCCCT +
Preference number: 6 (lower is better)
Translates to: AKRLNDLYRDDN*GPRSHSKSVTP
Trigger: AGGGGTCACTGACTTACTGTGGGACCTCGGGCCTCAGTTGTCGTCTCTGTAAAGGTCATTTAGTCGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477475.1
CDS CCA 72 bp GGCTGGCATCCTTGGGCTTGCTCTTGTTGCTACCCATaGTCCTTTTTGGGAGAGTTAGCCTCTCAAAACCTC +
Preference number: 6 (lower is better)
Translates to: GWHPWACSCCYP*SFLGELASQNL
Trigger: GAGGTTTTGAGAGGCTAACTCTCCCAAAAAGGACCATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373567.6
CDS CCA 72 bp TCTCTGACATCCACCTTCCTCGTGTTGTTGACAATCTaGAGCCGCTCGCCTTTCTTGAAGGACAGGTCTGTC +
Preference number: 6 (lower is better)
Translates to: SLTSTFLVLLTI*SRSPFLKDRSV
Trigger: GACAGACCTGTCCTTCAAGAAAGGCGAGCGGCTCCAGATTGTCAACAACACGAGGAAGGTGGATGTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373558.2
CDS CCA 72 bp CCTAACATCAGACGCTCAACTTCTTTGTTTTACGGGTaGGGAAACAGGCCCAGCAGGAGTCATGACTTGCCC +
Preference number: 6 (lower is better)
Translates to: PNIRRSTSLFYG*GNRPSRSHDLP
Trigger: GGGCAAGTCATGACTCCTGCTGGGCCTGTTTCCCCACCCGTAAAACAAAGAAGTTGAGCGTCTGATGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493775.1