Pregenerated sensors for SRA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000213523Ensembl transcript IDs: ENST00000336283.8, ENST00000336283.9, ENST00000520427.1, ENST00000523259.5, ENST00000602657.1, ENST00000602775.5, ENST00000602875.5
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACATGAACTCCCTCTGGCCCAGGTGGGACTTCTTCCCTCATAGGTaGGTCAGGCCCAGTGGGACAGTCTTGGTGGTGGTAAGAAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: HMNSLWPRWDFFPHR*VRPSGTVLVVVRRE Trigger: CTCCCTTCTTACCACCACCAAGACTGTCCCACTGGGCCTGACCCACCTATGAGGGAAGAAGTCCCACCTGGGCCAGAGGGAGTTCATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR CCA 90 bp | CCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTaGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGG | + |
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Preference number: 1 (lower is better) Translates to: PVKIERYLPQLEQRD*PEFGKEGLLHKPRR Trigger: CCGCCGGGGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CCA 90 bp | AAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTaGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: KRSQCQSRSKDTSPN*NRETGPNSARRVCC Trigger: GCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTGACTCCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CCA 90 bp | CGGGATCATCTTCACCTCTTTCAGCCACTTCTGCCCCACCAACGTTaGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATAC | + |
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Preference number: 1 (lower is better) Translates to: RDHLHLFQPLLPHQR*ANQKESVPVKIERY Trigger: GTATCTTTCGATCTTGACTGGCACTGACTCCTTTTGGTTGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGAAGATGATCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR TCA 90 bp | TACCCAAGGCCCACCGCAGAGATGTTTTTATTGAAATGCATGTTATaGGTAACACATGAACTCCCTCTGGCCCAGGTGGGACTTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: YPRPTAEMFLLKCML*VTHELPLAQVGLLP Trigger: GGGAAGAAGTCCCACCTGGGCCAGAGGGAGTTCATGTGTTACTCATAACATGCATTTCAATAAAAACATCTCTGCGGTGGGCCTTGGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR TCA 90 bp | GTTGAGGGAAAAGTCTCCCCGTTCTATTTGAGTCTGTTCTCATGCTaGAATGAAACCATCCAAACACAGCTGCTCCGCCCAGCACAGGAT | + |
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Preference number: 1 (lower is better) Translates to: VEGKVSPFYLSLFSC*NETIQTQLLRPAQD Trigger: ATCCTGTGCTGGGCGGAGCAGCTGTGTTTGGATGGTTTCATTTCAGCATGAGAACAGACTCAAATAGAACGGGGAGACTTTTCCCTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR TCA 90 bp | CACCGCAGAGATGTTTTTATTGAAATGCATGTTATGAGTAACACATaGACTCCCTCTGGCCCAGGTGGGACTTCTTCCCTCATAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: HRRDVFIEMHVMSNT*TPSGPGGTSSLIGG Trigger: CCCACCTATGAGGGAAGAAGTCCCACCTGGGCCAGAGGGAGTTCATGTGTTACTCATAACATGCATTTCAATAAAAACATCTCTGCGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR TCA 90 bp | CCACTCAATGTGGTTCTAATCTCTGTAACAGTAGTATCTCAAGGGTaGTACAGTGCAAATAGGACTGTCTTTCCTTTTGTTGAGGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: PLNVVLISVTVVSQG*YSANRTVFPFVEGK Trigger: TTTTCCCTCAACAAAAGGAAAGACAGTCCTATTTGCACTGTATCACCCTTGAGATACTACTGTTACAGAGATTAGAACCACATTGAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGACTAGCTTGGCACCGGAAGGGTTCATCTCTCCTACCCAAGGCCCACCGTCCCTCTGGCCCAGGTaGGACTTCTTCCCTCATAGG | + |
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Preference number: 2 (lower is better) Translates to: EGTSLAPEGFISPTQGPPSLWPR*DFFPHR Trigger: CCTATGAGGGAAGAAGTCCCACCTGGGCCAGAGGGA...CGGTGGGCCTTGGGTAGGAGAGATGAACCCTTCCGGTGCCAAGCTAGTCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR-3UTR GCA 90 bp | TCGGGATCATCTTCACCTCTTTCAGCCACTTCTGCCCCACCAACGTTGGGCCAAGCAAGGAGGGTCTGTTaGACAAGCCCCGGCGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SGSSSPLSATSAPPTLGQARRVC*TSPGGD Trigger: GTCCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGC...TTGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGAAGATGATCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CAA 90 bp | CAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATaGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QKESVPVKIERYLPQ*EQRDWPEFGKEGLL Trigger: CAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTGACTCCTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTCATCTCTCCTACCCAAGGCCCACCGCAGAGATGTTTTTATTGAAATGCCCAAGGCATAGGAGATaGTGTCCGGTGAGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RVHLSYPRPTAEMFLLKCPRHRR*CPVSLG Trigger: CCCCAGACTCACCGGACACCATCTCCTATGCCTTGG...GCATTTCAATAAAAACATCTCTGCGGTGGGCCTTGGGTAGGAGAGATGAACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR CAA 90 bp | TCGGGATCATCTTCACCTCTTTCAGCCACTTCTGCCCCACCAACGTaGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: SGSSSPLSATSAPPT*GQPKGVSASQDRKI Trigger: TATCTTTCGATCTTGACTGGCACTGACTCCTTTTGGTTGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGAAGATGATCCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR-3UTR TCA 90 bp | TCATCTCTCCTACCCAAGGCCCACCGCAGAGATGTTTTTATTGAAATGCATGTTAAGAAGGGAGCCAAGTaGCAGAAGGTCTCCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSLLPKAHRRDVFIEMHVKKGAK*QKVSKA Trigger: TGCCTTGGAGACCTTCTGTCACTTGGCTCCCTTCTT...AACATGCATTTCAATAAAAACATCTCTGCGGTGGGCCTTGGGTAGGAGAGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR-3UTR CCA 90 bp | AACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAATTTTGTCGCTCCCGTTaGACACAGTGGAATCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: NQKESVPVKIERYLPQLEFCRSR*TQWNLV Trigger: GACCAGATTCCACTGTGTCCAACGGGAGCGACAAAA...TTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTGACTCCTTTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR-3UTR CAA 90 bp | TCACCTCTTTCAGCCACTTCTGCCCCACCAACGTTGGGCCAACCAAAAGGAGTCCGGCGGGGACCAGTTTaGTCGCTCCCGTTGGACACA | + |
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Preference number: 3 (lower is better) Translates to: SPLSATSAPPTLGQPKGVRRGPV*SLPLDT Trigger: TGTGTCCAACGGGAGCGACAAAACTGGTCCCCGCCG...GACTCCTTTTGGTTGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR-3UTR CAA 90 bp | AGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCCGGCAAGGAGGGTCTGTaGCACAAGCCCCGGCGGGGA | + |
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Preference number: 3 (lower is better) Translates to: SASQDRKIPPPIGTERLAGKEGL*HKPRRG Trigger: TCCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGCC...GGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR-3UTR CAA 90 bp | GCCACTTCTGCCCCACCAACGTTGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAAGATACCTCCCCCAATaGGAACAGAGAGACTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: ATSAPPTLGQPKGVSASQRYLPQ*EQRDWP Trigger: GGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCT...TTGACTGGCACTGACTCCTTTTGGTTGGCCCAACGTTGGTGGGGCAGAAGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CCA 72 bp | CAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTaGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: QCQSRSKDTSPN*NRETGPNSARR Trigger: CCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CCA 72 bp | CTTCACCTCTTTCAGCCACTTCTGCCCCACCAACGTTaGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATC | + |
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Preference number: 3 (lower is better) Translates to: LHLFQPLLPHQR*ANQKESVPVKI Trigger: GATCTTGACTGGCACTGACTCCTTTTGGTTGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR-3UTR CAA 90 bp | AATTGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCGTTTTGTCGCTCCCGTaGGACACAGTGGAATCTGGT | + |
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Preference number: 3 (lower is better) Translates to: NWNRETGPNSARRVCCTSVLSLP*DTVESG Trigger: ACCAGATTCCACTGTGTCCAACGGGAGCGACAAAAC...GCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CCA 72 bp | ATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTaGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAG | + |
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Preference number: 3 (lower is better) Translates to: IERYLPQLEQRD*PEFGKEGLLHK Trigger: CTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR GCA 72 bp | TGTTCTCATGCTGAAATGAAACCATCCAAACACAGCTaGTCCGCCCAGCACAGGATGTGCTTTCAGTCTACT | + |
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Preference number: 3 (lower is better) Translates to: CSHAEMKPSKHS*SAQHRMCFQST Trigger: AGTAGACTGAAAGCACATCCTGTGCTGGGCGGAGCAGCTGTGTTTGGATGGTTTCATTTCAGCATGAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| 3UTR TCA 72 bp | GTGGTTCTAATCTCTGTAACAGTAGTATCTCAAGGGTaGTACAGTGCAAATAGGACTGTCTTTCCTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VVLISVTVVSQG*YSANRTVFPFV Trigger: AACAAAAGGAAAGACAGTCCTATTTGCACTGTATCACCCTTGAGATACTACTGTTACAGAGATTAGAACCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| CDS-3UTR GCA 90 bp | GAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGGCAAGGAGGGTCTGTTaGACAAGCCCCGGCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EQRDWPEFGKEGLLHKPRARRVC*TSPGGD Trigger: GTCCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGC...CCGGGGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR GCA 90 bp | GAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGGCGGTGGATGTCATCTaGTGCGTCCCACCGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: EQRDWPEFGKEGLLHKPRAVDVI*CVPPVA Trigger: AGCCACCGGTGGGACGCAGCAGATGACATCCACCGC...CCGGGGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CAA 72 bp | GGAGCAGGGCAGTCGAGGACACCAGAGGGGACTAGCTaGGCACCGGAAGGGTTCATCTCTCCTACCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GAGQSRTPEGTS*APEGFISPTQG Trigger: GCCTTGGGTAGGAGAGATGAACCCTTCCGGTGCCAAGCTAGTCCCCTCTGGTGTCCTCGACTGCCCTGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336283.8 |
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| CDS-3UTR TCA 90 bp | GAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGTCACATGGTCAACCATaGGGGAGCGGTGGATGTCAT | + |
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Preference number: 4 (lower is better) Translates to: ERLARIRQGGSVAQAPAGSHGQP*GSGGCH Trigger: ATGACATCCACCGCTCCCTCATGGTTGACCATGTGA...CCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | CTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGACCAGTAGTTCCTCAGTCACATaGTCAACCATGAGGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LARIRQGGSVAQAPAGTSSSSVT*STMRER Trigger: CCGCTCCCTCATGGTTGACCATGTGACTGAGGAACT...ACTGGTCCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CAA 72 bp | GAGGGTCTGTTGCACAAGCCCCGGCGGGGACCAGTTTaGTCGCTCCCGTTGGACACAGTGGAATCTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: EGLLHKPRRGPV*SLPLDTVESGH Trigger: ATGACCAGATTCCACTGTGTCCAACGGGAGCGACAAAACTGGTCCCCGCCGGGGCTTGTGCAACAGACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | GAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGACTCCCGTTGGACACAGTaGAATCTGGTCATTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ETGPNSARRVCCTSPGGDSRWTQ*NLVIWC Trigger: ACACCAAATGACCAGATTCCACTGTGTCCAACGGGA...GTCCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | AGATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTGCTGCGTCCCACCGGTaGCTTGAAAGCTCTTGCACC | + |
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Preference number: 4 (lower is better) Translates to: RYLPQLEQRDWPEFGKEGAASHR*LESSCT Trigger: GGTGCAAGAGCTTTCAAGCCACCGGTGGGACGCAGC...ACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | CGGCGGGGACCAGTTTTGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTTGACCATGAGGGAGCGGTaGATGTCATCTGCTGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: RRGPVLSLPLDTVESGHLTMRER*MSSAAS Trigger: GGACGCAGCAGATGACATCCACCGCTCCCTCATGGT...CAAATGACCAGATTCCACTGTGTCCAACGGGAGCGACAAAACTGGTCCCCGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR GCA 90 bp | GAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGACCAAAAGGAGTCAGTaGCAGTCAAGATCGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: ERLARIRQGGSVAQAPAGTKRSQ*QSRSKD Trigger: ATCTTTCGATCTTGACTGGCACTGACTCCTTTTGGT...CCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | ATTGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCGATACCTCCCCCAATTaGAACAGAGAGACTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: IGTERLARIRQGGSVAQADTSPN*NRETGP Trigger: CGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATC...GGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | TCTTCGGGATCATCTTCACCTCTTTCAGCCACTTCTGCCCCACCAACGTTGGGCCTGCCCCACCAACGTTaGGCCAACCAAAAGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSGSSSPLSATSAPPTLGLPHQR*ANQKES Trigger: TGACTCCTTTTGGTTGGCCCAACGTTGGTGGGGCAG...GCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGAAGATGATCCCGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR GCA 90 bp | AATTGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCTCTTTCAGCCACTTCTaGCCCACCAACGTTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: NWNRETGPNSARRVCCTSSFSHF*PTNVGP Trigger: TGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGA...GCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | TCGGGATCATCTTCACCTCTTTCAGCCACTTCTGCCCCACCAACGTTGGGCCAATTGGAACAGAGAGACTaGCCCGAATTCGGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SGSSSPLSATSAPPTLGQLEQRD*PEFGKE Trigger: CTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAA...TTGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGAAGATGATCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| 3UTR CAA 72 bp | TCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATaGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SVPVKIERYLPQ*EQRDWPEFGKE Trigger: CTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR GCA 90 bp | ATTGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCAGGTACAATTGCCTTaGTCTCTCTCTGGAGGGATA | + |
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Preference number: 4 (lower is better) Translates to: IGTERLARIRQGGSVAQAQVQLP*SLSGGI Trigger: TATCCCTCCAGAGAGAGAGCAAGGCAATTGTACCTG...GGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | AAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGTTTTGTCGCTCCCGTTaGACACAGTGGAATCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: KDTSPNWNRETGPNSARRFCRSR*TQWNLV Trigger: GACCAGATTCCACTGTGTCCAACGGGAGCGACAAAA...CCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR GCA 90 bp | ATCTTCACCTCTTTCAGCCACTTCTGCCCCACCAACGTTGGGCCAACCAAAAGGTGTGTCAGGTACAATTaGCTTGCTCTCTCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IFTSFSHFCPTNVGPTKRCVRYN*LALSLE Trigger: CTCCAGAGAGAGAGCAAGGCAATTGTACCTGACACA...CCTTTTGGTTGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | AAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGCCTTGCTCTCTCTCTaGAGGGATATCTTAAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: KDTSPNWNRETGPNSARRALLSL*RDILSK Trigger: CTTACTTAAGATATCCCTCCAGAGAGAGAGCAAGGC...CCTCCTTGCCGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | CAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCGGACACAGTGGAATCTaGTCATTTGGTGTCAATGCT | + |
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Preference number: 4 (lower is better) Translates to: QCQSRSKDTSPNWNRETGGHSGI*SFGVNA Trigger: AGCATTGACACCAAATGACCAGATTCCACTGTGTCC...GCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR GCA 90 bp | CCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAAGTCATTTGGTGTCAATaGTGTGTCAGGTACAATTGC | + |
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Preference number: 4 (lower is better) Translates to: PVKIERYLPQLEQRDWPEVIWCQ*CVRYNC Trigger: GCAATTGTACCTGACACAGCATTGACACCAAATGAC...TTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CCA 90 bp | TCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTCGTGGAATCTGGTCATTTaGTGTCAATGCTGTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRSKDTSPNWNRETGPNSWNLVI*CQCCVR Trigger: CCTGACACAGCATTGACACCAAATGACCAGATTCCA...CGAATTCGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS GCA 90 bp | GAGCGCCTGGGTCCGCCGGCCTGGGTCTGCAGCCCGTATGAGAACTaGGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCTGCGGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: ERLGPPAWVCSPYEN*GGSFQPRSLLPAEA Trigger: CGCCTCCGCAGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACCCAGGCGCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS CCA 90 bp | GCGGCGACCCTCTTGGTAAGCAGCGAGCGCCTGGGTCCGCCGGCCTaGGTCTGCAGCCCGTATGAGAACTGCGGCGGGTCGTTCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AATLLVSSERLGPPA*VCSPYENCGGSFQP Trigger: CGGCTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACCCAGGCGCTCGCTGCTTACCAAGAGGGTCGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS TCA 90 bp | AAGCAGCGAGCGCCTGGGTCCGCCGGCCTGGGTCTGCAGCCCGTATaGGAACTGCGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KQRAPGSAGLGLQPV*ELRRVVPAAFLVAR Trigger: CCGGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACCCAGGCGCTCGCTGCTT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336283.9 |
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| CDS GCA 90 bp | GAGCGCCTGGGTCCGCCGGCCTGGGTCTGCAGCCCGTATGAGAACTaGGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCCGGCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: ERLGPPAWVCSPYEN*GGSFQPRSLLPGFT Trigger: CGTGAAGCCGGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACCCAGGCGCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336283.9 |
||
| CDS TCA 90 bp | AAGCAGCGAGCGCCTGGGTCCGCCGGCCTGGGTCTGCAGCCCGTATaGGAACTGCGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQRAPGSAGLGLQPV*ELRRVVPAAFLVAC Trigger: GCAGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACCCAGGCGCTCGCTGCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS GCA 90 bp | ACCCTCTTGGTAAGCAGCGAGCGCCTGGGTCCGCCGGCCTGGGTCTaGAGCCCGTATGAGAACTGCGGCGGGTCGTTCCAGCCGCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLVSSERLGPPAWV*SPYENCGGSFQPRS Trigger: GGAACGCGGCTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACCCAGGCGCTCGCTGCTTACCAAGAGGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS GCA 90 bp | ACACGTCCAGGGCCAGGCGGGTTGCCGGAATCCGTGGAGGATGGATaGTGGTTCACAACCGTCGGGAGCCGCTGTGGGGACCCTGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRPGPGGLPESVEDG*WFTTVGSRCGDPAA Trigger: TGCCGCAGGGTCCCCACAGCGGCTCCCGACGGTTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGACGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CCA 90 bp | CGTCCAGGGCCAGGCGGGTTGCCGGAATCCGTGGAGGATGGATGCTaGTTCACAACCGTCGGGAGCCGCTGTGGGGACCCTGCGGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RPGPGGLPESVEDGC*FTTVGSRCGDPAAT Trigger: AGTTGCCGCAGGGTCCCCACAGCGGCTCCCGACGGTTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS GCA 90 bp | GCCCCTCACGCGGGCCAGTTGAGACACGTCCAGGGCCAGGCGGGTTaGCGGAATCCGTGGAGGATGGATGCTGGTTCACAACCGTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: APHAGQLRHVQGQAG*RNPWRMDAGSQPSG Trigger: TCCCGACGGTTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGACGTGTCTCAACTGGCCCGCGTGAGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CCA 90 bp | GGCCAGTTGAGACACGTCCAGGGCCAGGCGGGTTGCCGGAATCCGTaGAGGATGGATGCTGGTTCACAACCGTCGGGAGCCGCTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQLRHVQGQAGCRNP*RMDAGSQPSGAAVG Trigger: CCCCACAGCGGCTCCCGACGGTTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGACGTGTCTCAACTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520427.1 |
||
| CDS-3UTR CAA 90 bp | AGAGACTGGCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGAGGCAAGGAGGGTCTGTaGCACAAGCCCCGGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RDWPEFGKEGLLHKPRRGGKEGL*HKPRRG Trigger: TCCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGCC...TCCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGCCGAATTCGGGCCAGTCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000602657.1 |
||
| CDS GCA 90 bp | GCCCGTATGAGAACTGCGGCGGGTCGTTCCAGCCGCGTTCCTTGTTaGCTGCGGAGGCGAGGGATGTGTGAAGCGAGCCCGGAACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARMRTAAGRSSRVPC*LRRRGMCEASPELH Trigger: GTGGAGTTCCGGGCTCGCTTCACACATCCCTCGCCTCCGCAGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAGTTCTCATACGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS TCA 90 bp | TCGTTCCAGCCGCGTTCCTTGTTGCCTGCGGAGGCGAGGGATGTGTaGAGCGAGCCCGGAACTCCACTGTTAGCTTATACTGGGGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFQPRSLLPAEARDV*SEPGTPLLAYTGAG Trigger: GCCGGCCCCAGTATAAGCTAACAGTGGAGTTCCGGGCTCGCTTCACACATCCCTCGCCTCCGCAGGCAACAAGGAACGCGGCTGGAACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520427.1 |
||
| CDS CCA 90 bp | TCAGCACATCCTCCATCACAGCCTCAGACTCGACTGGGAAACTTGTaGGCTCCACGCCAGAGGCAGGACCACTCCCCACAGGTGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SAHPPSQPQTRLGNL*APRQRQDHSPQVGT Trigger: GGTCCCCACCTGTGGGGAGTGGTCCTGCCTCTGGCGTGGAGCCCACAAGTTTCCCAGTCGAGTCTGAGGCTGTGATGGAGGATGTGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 |
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| CDS TCA 90 bp | TCGTTCCAGCCGCGTTCCTTGTTGCCTGCGGAGGCGAGGGATGTGTaGAGCGAGCCCGGAACTCCACTGTTAGCTTATACTGGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SFQPRSLLPAEARDV*SEPGTPLLAYTGAG Trigger: CCCAGCCCCAGTATAAGCTAACAGTGGAGTTCCGGGCTCGCTTCACACATCCCTCGCCTCCGCAGGCAACAAGGAACGCGGCTGGAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS CCA 90 bp | GAGGGATGTGTGAAGCGAGCCCGGAACTCCACTGTTAGCTTATACTaGGGCTGGGGGAGACAGAGGGTCCATACTAAGCGCCGCAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: EGCVKRARNSTVSLY*GWGRQRVHTKRRNR Trigger: GCGGTTGCGGCGCTTAGTATGGACCCTCTGTCTCCCCCAGCCCCAGTATAAGCTAACAGTGGAGTTCCGGGCTCGCTTCACACATCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS TCA 90 bp | ACTTTCCTCCAGCCCACTGTTCCTGCAGCAGTGCCAGGCGTCGGCTaGTGTCATCACATACCTGCTTCTCTGGGGGATCCATCCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TFLQPTVPAAVPGVG*CHHIPASLGDPSWG Trigger: ACCCCAGGATGGATCCCCCAGAGAAGCAGGTATGTGATGACATCAGCCGACGCCTGGCACTGCTGCAGGAACAGTGGGCTGGAGGAAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602875.5 |
||
| CDS CCA 90 bp | TTCCAAAGGTCTCAGCACATCCTCCATCACAGCCTCAGACTCGACTaGGAAACTTGTGGGCTCCACGCCAGAGGCAGGACCACTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FQRSQHILHHSLRLD*ETCGLHARGRTTPH Trigger: GTGGGGAGTGGTCCTGCCTCTGGCGTGGAGCCCACAAGTTTCCCAGTCGAGTCTGAGGCTGTGATGGAGGATGTGCTGAGACCTTTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 |
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| CDS TCA 90 bp | ACTTTCCTCCAGCCCACTGTTCCTGCAGCAGTGCCAGGCGTCGGCTaGTGTCATCACATACCTGCTTCCTTGTGTGGCCACGGCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TFLQPTVPAAVPGVG*CHHIPASLCGHGSL Trigger: AAGACTGCCGTGGCCACACAAGGAAGCAGGTATGTGATGACATCAGCCGACGCCTGGCACTGCTGCAGGAACAGTGGGCTGGAGGAAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000602775.5 |
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| CDS CCA 90 bp | TGGGAGCCCTCTCTAACCTCTGATGTGCCAGAGCTTACCCTTGTGTaGCCACGGCAGTCTTCCAATGCCTGTTCCAAAGGTCTCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: WEPSLTSDVPELTLV*PRQSSNACSKGLST Trigger: TGTGCTGAGACCTTTGGAACAGGCATTGGAAGACTGCCGTGGCCACACAAGGGTAAGCTCTGGCACATCAGAGGTTAGAGAGGGCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523259.5 |
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| CDS CCA 90 bp | CCGGCGGGGACCAGTTTTGTCGCTCCCGTTGGACACAGTGGAATCTaGTCATTTGGTGTCAATGCTGTGTCAGGTACAATTGCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAGTSFVAPVGHSGI*SFGVNAVSGTIALL Trigger: GAGCAAGGCAATTGTACCTGACACAGCATTGACACCAAATGACCAGATTCCACTGTGTCCAACGGGAGCGACAAAACTGGTCCCCGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CAA 90 bp | CCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACACGGCGGGGACCAGTTTaGTCGCTCCCGTTGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: PKGVSASQDRKIPPPIGTRRGPV*SLPLDT Trigger: TGTGTCCAACGGGAGCGACAAAACTGGTCCCCGCCG...TGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTGACTCCTTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CAA 90 bp | AGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCCTCTGCCCCACCAACGTaGGGCCAACCAAAAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SASQDRKIPPPIGTERLASAPPT*GQPKGV Trigger: GACTCCTTTTGGTTGGCCCAACGTTGGTGGGGCAGA...GGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602657.1 |
||
| CDS TCA 90 bp | AGGCATAGGAGATGGTGTCCGGTGAGTCTGGGGAACCGAGGATTATaGAGCCTGCTGGAAGCCTGGTATGGTATGGTTCTTCTCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RHRRWCPVSLGNRGL*SLLEAWYGMVLLSC Trigger: ACAGCTGAGAAGAACCATACCATACCAGGCTTCCAGCAGGCTTCATAATCCTCGGTTCCCCAGACTCACCGGACACCATCTCCTATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS GCA 90 bp | GTCATCACATACCTGCTTCCTTGTGTGGCCACGGCAGTCTTCCAATaGCTGTTCCAAAGGTCTCAGCACATCCTCCATCACAGCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VITYLLPCVATAVFQ*LFQRSQHILHHSLR Trigger: TCTGAGGCTGTGATGGAGGATGTGCTGAGACCTTTGGAACAGGCATTGGAAGACTGCCGTGGCCACACAAGGAAGCAGGTATGTGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000602775.5 |
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| CDS CCA 90 bp | TCAGAGGGTCTATCTCTGGGAACCATTCCTGCATTTGGCTGTGGATaGGAGCCCTCTCTAACCTCTGATGTGCCAGAGCTTACCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SEGLSLGTIPAFGCG*EPSLTSDVPELTLV Trigger: CACAAGGGTAAGCTCTGGCACATCAGAGGTTAGAGAGGGCTCCCATCCACAGCCAAATGCAGGAATGGTTCCCAGAGATAGACCCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523259.5 |
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| CDS-3UTR CAA 90 bp | AACGTTGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCGTCCCACCGGTGGCTaGAAAGCTCTTGCACCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NVGPTKRSQCQSRSKDTSRPTGG*KALAPV Trigger: TACTGGTGCAAGAGCTTTCAAGCCACCGGTGGGACG...GGAGGTATCTTTCGATCTTGACTGGCACTGACTCCTTTTGGTTGGCCCAACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CAA 90 bp | TCGGGATCATCTTCACCTCTTTCAGCCACTTCTGCCCCACCAACGTTGGGCCAATCAGGTACAATTGCCTaGCTCTCTCTCTGGAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGSSSPLSATSAPPTLGQSGTIA*LSLWRD Trigger: ATCCCTCCAGAGAGAGAGCAAGGCAATTGTACCTGA...TTGGCCCAACGTTGGTGGGGCAGAAGTGGCTGAAAGAGGTGAAGATGATCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS GCA 90 bp | CTCTTCTTTACAGGTATTGACAACTTTCCTCCAGCCCACTGTTCCTaGAGCAGTGCCAGGCGTCGGCTGATGTCATCACATACCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFFTGIDNFPPAHCS*SSARRRLMSSHTCF Trigger: GAAGCAGGTATGTGATGACATCAGCCGACGCCTGGCACTGCTGCAGGAACAGTGGGCTGGAGGAAAGTTGTCAATACCTGTAAAGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS CCA 90 bp | TTAAAACTTAGTTCCTCAGTCACATGGTCAACCATGAGGGAGCGGTaGATGTCATCTGCTGCGTCCCACCGGTGGCTTGAAAGCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKLSSSVTWSTMRER*MSSAASHRWLESSC Trigger: GCAAGAGCTTTCAAGCCACCGGTGGGACGCAGCAGATGACATCCACCGCTCCCTCATGGTTGACCATGTGACTGAGGAACTAAGTTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CAA 90 bp | ACTTCTGCCCCACCAACGTTGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCTGTGTCAGGTACAATaGCCTTGCTCTCTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSAPPTLGQPKGVSASQDLCQVQ*PCSLSG Trigger: TCCAGAGAGAGAGCAAGGCAATTGTACCTGACACAG...ATCTTGACTGGCACTGACTCCTTTTGGTTGGCCCAACGTTGGTGGGGCAGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CAA 90 bp | CAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCGTTTTGTCGCTCCCGTaGGACACAGTGGAATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QCQSRSKDTSPNWNRETGVLSLP*DTVESG Trigger: ACCAGATTCCACTGTGTCCAACGGGAGCGACAAAAC...GCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS CCA 90 bp | GAGTCTGGGGAACCGAGGATTATGAAGCCTGCTGGAAGCCTGGTATaGTATGGTTCTTCTCAGCTGTGGCTGCAGATTTCTCTTCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESGEPRIMKPAGSLV*YGSSQLWLQISLHW Trigger: CCAATGAAGAGAAATCTGCAGCCACAGCTGAGAAGAACCATACCATACCAGGCTTCCAGCAGGCTTCATAATCCTCGGTTCCCCAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS-3UTR CAA 90 bp | CCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAAGATACCTCCCCCAATaGGAACAGAGAGACTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PKGVSASQDRKIPPPIGTRYLPQ*EQRDWP Trigger: GGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCT...TGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCACTGACTCCTTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS GCA 90 bp | TGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTTGGTGTCAATaGTGTGTCAGGTACAATTGCCTTGCTCTCTCTCTGGAGGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: CRSRWTQWNLVIWCQ*CVRYNCLALSLEGY Trigger: ATATCCCTCCAGAGAGAGAGCAAGGCAATTGTACCTGACACAGCATTGACACCAAATGACCAGATTCCACTGTGTCCAACGGGAGCGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS CCA 90 bp | GACCAGTTTTGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTTaGTGTCAATGCTGTGTCAGGTACAATTGCCTTGCTCTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DQFCRSRWTQWNLVI*CQCCVRYNCLALSL Trigger: CAGAGAGAGAGCAAGGCAATTGTACCTGACACAGCATTGACACCAAATGACCAGATTCCACTGTGTCCAACGGGAGCGACAAAACTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CAA 90 bp | TGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGTCTTCTTTACAGGTATaGACAACTTTCCTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CQSRSKDTSPNWNRETGPSSLQV*TTFLQP Trigger: GGGCTGGAGGAAAGTTGTCAATACCTGTAAAGAAGA...CGGGCCAGTCTCTCTGTTCCAATTGGGGGAGGTATCTTTCGATCTTGACTGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS-3UTR CAA 90 bp | AACGTTGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCGTGGAATCTGGTCATTaGGTGTCAATGCTGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NVGPTKRSQCQSRSKDTSVESGH*VSMLCQ Trigger: CTGACACAGCATTGACACCAAATGACCAGATTCCAC...GGAGGTATCTTTCGATCTTGACTGGCACTGACTCCTTTTGGTTGGCCCAACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS TCA 90 bp | AATGGCATGGAGATACAGAAAATCAGGTTGTTCACTAATAGGAGCTaGATTCAACTCTTGTTCCCACAGCATCTTCTACTGATTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NGMEIQKIRLFTNRS*IQLLFPQHLLLIGL Trigger: AAGACCAATCAGTAGAAGATGCTGTGGGAACAAGAGTTGAATTCAGCTCCTATTAGTGAACAACCTGATTTTCTGTATCTCCATGCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523259.5 |
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| CDS CAA 72 bp | ACTCTGGGGGATCCATCCTGGGGTGCGGCGACCCTCTaGGTAAGCAGCGAGCGCCTGGGTCCGCCGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TLGDPSWGAATL*VSSERLGPPAW Trigger: CCAGGCCGGCGGACCCAGGCGCTCGCTGCTTACCAAGAGGGTCGCCGCACCCCAGGATGGATCCCCCAGAGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 |
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| CDS CAA 72 bp | CGCGTCATTTCCGGGGCGGCCCCTCACGCGGGCCAGTaGAGACACGTCCAGGGCCAGGCGGGTTGCCGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RVISGAAPHAGQ*RHVQGQAGCRN Trigger: ATTCCGGCAACCCGCCTGGCCCTGGACGTGTCTCAACTGGCCCGCGTGAGGGGCCGCCCCGGAAATGACGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520427.1 |
||
| CDS CAA 72 bp | TCTCTGGGGGATCCATCCTGGGGTGCGGCGACCCTCTaGGTAAGCAGCGAGCGCCTGGGTCCGCCGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGDPSWGAATL*VSSERLGPPAW Trigger: CCAGGCCGGCGGACCCAGGCGCTCGCTGCTTACCAAGAGGGTCGCCGCACCCCAGGATGGATCCCCCAGAGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602875.5 |
||
| CDS GCA 72 bp | GGTCCGCCGGCCTGGGTCTGCAGCCCGTATGAGAACTaGGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPPAWVCSPYEN*GGSFQPRSLLP Trigger: GGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336283.9 |
||
| CDS GCA 72 bp | GTAAGCAGCGAGCGCCTGGGTCCGCCGGCCTGGGTCTaGAGCCCGTATGAGAACTGCGGCGGGTCGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSSERLGPPAWV*SPYENCGGSFQ Trigger: CTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACCCAGGCGCTCGCTGCTTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
||
| CDS CCA 72 bp | CTCTTGGTAAGCAGCGAGCGCCTGGGTCCGCCGGCCTaGGTCTGCAGCCCGTATGAGAACTGCGGCGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLVSSERLGPPA*VCSPYENCGGS Trigger: CGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACCCAGGCGCTCGCTGCTTACCAAGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS CCA 72 bp | GGCTTCACGTACAGCTCCGCCATCTCCACTTCCGCTTaGCCAGCGGGGCAGCGCGTCATTTCCGGGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GFTYSSAISTSA*PAGQRVISGAA Trigger: GGCCGCCCCGGAAATGACGCGCTGCCCCGCTGGCCAAGCGGAAGTGGAGATGGCGGAGCTGTACGTGAAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CAA 72 bp | CGGCTTCACGTACAGCTCCGCCATCTCCACTTCCGCTaGGCCAGCGGGGCAGCGCGTCATTTCCGGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RLHVQLRHLHFR*ASGAARHFRGG Trigger: GCCGCCCCGGAAATGACGCGCTGCCCCGCTGGCCAAGCGGAAGTGGAGATGGCGGAGCTGTACGTGAAGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CAA 90 bp | GGCCCCTCACGCGGGCCAGTTGAGACACGTCCAGGGCCAGGCGGGTaGCCGGAATCCGTGGAGGATGGATGCTGGTTCACAACCGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: GPSRGPVETRPGPGG*PESVEDGCWFTTVG Trigger: CCCGACGGTTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGACGTGTCTCAACTGGCCCGCGTGAGGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CAA 90 bp | ATACCTGCTTCTCTGGGGGATCCATCCTGGGGTGCGGCGACCCTCTaGGTAAGCAGCGAGCGCCTGGGTCCGCCGGCCTGGGTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IPASLGDPSWGAATL*VSSERLGPPAWVCS Trigger: GCTGCAGACCCAGGCCGGCGGACCCAGGCGCTCGCTGCTTACCAAGAGGGTCGCCGCACCCCAGGATGGATCCCCCAGAGAAGCAGGTAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602875.5 |
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| CDS GCA 72 bp | CTGCGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCTaGGGAGGCGAGGGATGTGTGAAGCGAGCCCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LRRVVPAAFLVA*GGEGCVKRARN Trigger: GTTCCGGGCTCGCTTCACACATCCCTCGCCTCCGCAGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS GCA 72 bp | GGTCCGCCGGCCTGGGTCTGCAGCCCGTATGAGAACTaGGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: GPPAWVCSPYEN*GGSFQPRSLLP Trigger: AGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAGTTCTCATACGGGCTGCAGACCCAGGCCGGCGGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS GCA 72 bp | AGAACTGCGGCGGGTCGTTCCAGCCGCGTTCCTTGTTaGCTGCGGAGGCGAGGGATGTGTGAAGCGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: RTAAGRSSRVPC*LRRRGMCEASP Trigger: CGGGCTCGCTTCACACATCCCTCGCCTCCGCAGGCAACAAGGAACGCGGCTGGAACGACCCGCCGCAGTTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS CCA 72 bp | CCAGGCGGGTTGCCGGAATCCGTGGAGGATGGATGCTaGTTCACAACCGTCGGGAGCCGCTGTGGGGACCCT | + |
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Preference number: 6 (lower is better) Translates to: PGGLPESVEDGC*FTTVGSRCGDP Trigger: AGGGTCCCCACAGCGGCTCCCGACGGTTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CCA 72 bp | TCCAGGGCCAGGCGGGTTGCCGGAATCCGTGGAGGATaGATGCTGGTTCACAACCGTCGGGAGCCGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SRARRVAGIRGG*MLVHNRREPLW Trigger: CCACAGCGGCTCCCGACGGTTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CCA 72 bp | GAAGTCTCTGATGCGGGGACTCTGGGGGATCCATCCTaGGGTGCGGCGACCCTCTTGGTAAGCAGCGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: EVSDAGTLGDPS*GAATLLVSSER Trigger: GCGCTCGCTGCTTACCAAGAGGGTCGCCGCACCCCAGGATGGATCCCCCAGAGTCCCCGCATCAGAGACTTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 |
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| CDS CCA 72 bp | AGACACGTCCAGGGCCAGGCGGGTTGCCGGAATCCGTaGAGGATGGATGCTGGTTCACAACCGTCGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RHVQGQAGCRNP*RMDAGSQPSGA Trigger: GGCTCCCGACGGTTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGACGTGTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CAA 72 bp | CGCGGGCCAGTTGAGACACGTCCAGGGCCAGGCGGGTaGCCGGAATCCGTGGAGGATGGATGCTGGTTCACA | + |
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Preference number: 6 (lower is better) Translates to: RGPVETRPGPGG*PESVEDGCWFT Trigger: TGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGACGTGTCTCAACTGGCCCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS GCA 72 bp | GCGGGCCAGTTGAGACACGTCCAGGGCCAGGCGGGTTaGCGGAATCCGTGGAGGATGGATGCTGGTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: AGQLRHVQGQAG*RNPWRMDAGSQ Trigger: TTGTGAACCAGCATCCATCCTCCACGGATTCCGGCAACCCGCCTGGCCCTGGACGTGTCTCAACTGGCCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS GCA 72 bp | TCACATACCTGCTTCTCTGGGGGATCCATCCTGGGGTaGGGCGACCCTCTTGGTAAGCAGCGAGCGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SHTCFSGGSILG*GDPLGKQRAPG Trigger: CCCAGGCGCTCGCTGCTTACCAAGAGGGTCGCCGCACCCCAGGATGGATCCCCCAGAGAAGCAGGTATGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602875.5 |
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| CDS CCA 72 bp | GGATGGATGCTGGTTCACAACCGTCGGGAGCCGCTGTaGGGACCCTGCGGCAACTCCCTAAGACTCGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GWMLVHNRREPL*GPCGNSLRLEG Trigger: GCCTTCGAGTCTTAGGGAGTTGCCGCAGGGTCCCCACAGCGGCTCCCGACGGTTGTGAACCAGCATCCATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520427.1 |
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| CDS CAA 90 bp | GTCTCAGCACATCCTCCATCACAGCCTCAGACTCGACTGGGAAACTaGTGGGCTCCACGCCAGAGGCAGGACCACTCCCCACAGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VSAHPPSQPQTRLGN*WAPRQRQDHSPQVG Trigger: CCCCACCTGTGGGGAGTGGTCCTGCCTCTGGCGTGGAGCCCACAAGTTTCCCAGTCGAGTCTGAGGCTGTGATGGAGGATGTGCTGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 |
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| CDS CCA 72 bp | CCTCCATCACAGCCTCAGACTCGACTGGGAAACTTGTaGGCTCCACGCCAGAGGCAGGACCACTCCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: PPSQPQTRLGNL*APRQRQDHSPQ Trigger: CTGTGGGGAGTGGTCCTGCCTCTGGCGTGGAGCCCACAAGTTTCCCAGTCGAGTCTGAGGCTGTGATGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 |
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| CDS CCA 72 bp | TGTCATCACATACCTGCTTCTCTGGGGGATCCATCCTaGGGTGCGGCGACCCTCTTGGTAAGCAGCGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: CHHIPASLGDPS*GAATLLVSSER Trigger: GCGCTCGCTGCTTACCAAGAGGGTCGCCGCACCCCAGGATGGATCCCCCAGAGAAGCAGGTATGTGATGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602875.5 |
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| CDS TCA 72 bp | CAGCCCACTGTTCCTGCAGCAGTGCCAGGCGTCGGCTaGTGTCATCACATACCTGCTTCCTTGTGTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: QPTVPAAVPGVG*CHHIPASLCGH Trigger: GTGGCCACACAAGGAAGCAGGTATGTGATGACATCAGCCGACGCCTGGCACTGCTGCAGGAACAGTGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000602775.5 |
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| CDS TCA 72 bp | CAGCCCACTGTTCCTGCAGCAGTGCCAGGCGTCGGCTaGTGTCATCACATACCTGCTTCTCTGGGGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: QPTVPAAVPGVG*CHHIPASLGDP Trigger: TGGATCCCCCAGAGAAGCAGGTATGTGATGACATCAGCCGACGCCTGGCACTGCTGCAGGAACAGTGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602875.5 |
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| CDS CCA 72 bp | TCTCAGCACATCCTCCATCACAGCCTCAGACTCGACTaGGAAACTTGTGGGCTCCACGCCAGAGGCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: SQHILHHSLRLD*ETCGLHARGRT Trigger: GGTCCTGCCTCTGGCGTGGAGCCCACAAGTTTCCCAGTCGAGTCTGAGGCTGTGATGGAGGATGTGCTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 |
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| CDS CAA 90 bp | TTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGACCAGTTTaGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTTGGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: FGKEGLLHKPRRGPV*SLPLDTVESGHLVS Trigger: TGACACCAAATGACCAGATTCCACTGTGTCCAACGGGAGCGACAAAACTGGTCCCCGCCGGGGCTTGTGCAACAGACCCTCCTTGCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS CCA 72 bp | AGGGAGCGGTGGATGTCATCTGCTGCGTCCCACCGGTaGCTTGAAAGCTCTTGCACCAGTAGAGCCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: RERWMSSAASHR*LESSCTSRAIL Trigger: GAGAATGGCTCTACTGGTGCAAGAGCTTTCAAGCCACCGGTGGGACGCAGCAGATGACATCCACCGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602657.1 ENST00000602775.5 ENST00000602875.5 |
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| CDS CCA 72 bp | CTGACCTCAGTCACATGGTCAACCATGAGGGAGCGGTaGATGTCATCTGCTGCGTCCCACCGGTGGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LTSVTWSTMRER*MSSAASHRWLE Trigger: TTCAAGCCACCGGTGGGACGCAGCAGATGACATCCACCGCTCCCTCATGGTTGACCATGTGACTGAGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS CCA 72 bp | AGTTCCTCAGTCACATGGTCAACCATGAGGGAGCGGTaGATGTCATCTGCTGCGTCCCACCGGTGGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSSVTWSTMRER*MSSAASHRWLE Trigger: TTCAAGCCACCGGTGGGACGCAGCAGATGACATCCACCGCTCCCTCATGGTTGACCATGTGACTGAGGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS TCA 72 bp | ACAGAAGGTCTCCAAGGCATAGGAGATGGTGTCCGGTaGGTCTGGGGAACCGAGGATTATGAAGCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TEGLQGIGDGVR*VWGTEDYEACW Trigger: CCAGCAGGCTTCATAATCCTCGGTTCCCCAGACTCACCGGACACCATCTCCTATGCCTTGGAGACCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS TCA 72 bp | CAGCCCACTGTTCCTGCAGCAGTGCCAGGCGTCGGCTaGTGTCATCACATACCTGCTTCTAAGAGACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: QPTVPAAVPGVG*CHHIPASKRQK Trigger: CTTCTGTCTCTTAGAAGCAGGTATGTGATGACATCAGCCGACGCCTGGCACTGCTGCAGGAACAGTGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523259.5 |
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| CDS CCA 72 bp | GGCGGGGACCAGTTTTGTCGCTCCCGTTGGACACAGTaGAATCTGGTCATTTGGTGTCAATGCTGTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GGDQFCRSRWTQ*NLVIWCQCCVR Trigger: CCTGACACAGCATTGACACCAAATGACCAGATTCCACTGTGTCCAACGGGAGCGACAAAACTGGTCCCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS GCA 72 bp | TACCTGCTTCCTTGTGTGGCCACGGCAGTCTTCCAATaGCTGTTCCAAAGGTCTCAGCACATCCTCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: YLLPCVATAVFQ*LFQRSQHILHH Trigger: GTGATGGAGGATGTGCTGAGACCTTTGGAACAGGCATTGGAAGACTGCCGTGGCCACACAAGGAAGCAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000602775.5 |
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| CDS GCA 72 bp | ACAGGTATTGACAACTTTCCTCCAGCCCACTGTTCCTaGAGCAGTGCCAGGCGTCGGCTGATGTCATCACAT | + |
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Preference number: 6 (lower is better) Translates to: TGIDNFPPAHCS*SSARRRLMSSH Trigger: ATGTGATGACATCAGCCGACGCCTGGCACTGCTGCAGGAACAGTGGGCTGGAGGAAAGTTGTCAATACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS GCA 72 bp | AGAGCTTACCCTTGTGTGGCCACGGCAGTCTTCCAATaGCTGTTCCAAAGGTCTCAGCACATCCTCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: RAYPCVATAVFQ*LFQRSQHILHH Trigger: GTGATGGAGGATGTGCTGAGACCTTTGGAACAGGCATTGGAAGACTGCCGTGGCCACACAAGGGTAAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523259.5 |
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| CDS TCA 72 bp | AGATGGTGTCCGGTGAGTCTGGGGAACCGAGGATTATaGAGCCTGCTGGAAGCCTGGTATGGTATGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RWCPVSLGNRGL*SLLEAWYGMVL Trigger: AAGAACCATACCATACCAGGCTTCCAGCAGGCTTCATAATCCTCGGTTCCCCAGACTCACCGGACACCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000336283.9 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS CCA 72 bp | TCTCTAACCTCTGATGTGCCAGAGCTTACCCTTGTGTaGCCACGGCAGTCTTCCAATGCCTGTTCCAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SLTSDVPELTLV*PRQSSNACSKG Trigger: ACCTTTGGAACAGGCATTGGAAGACTGCCGTGGCCACACAAGGGTAAGCTCTGGCACATCAGAGGTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523259.5 |
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| CDS CAA 90 bp | TTGAAAGCTCTTGCACCAGTAGAGCCATTCTCTTCTTTACAGGTATaGACAACTTTCCTCCAGCCCACTGTTCCTGCAGCAGTGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LKALAPVEPFSSLQV*TTFLQPTVPAAVPG Trigger: GCCTGGCACTGCTGCAGGAACAGTGGGCTGGAGGAAAGTTGTCAATACCTGTAAAGAAGAGAATGGCTCTACTGGTGCAAGAGCTTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS CAA 90 bp | GGACCAGTTTTGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTaGGTGTCAATGCTGTGTCAGGTACAATTGCCTTGCTCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GPVLSLPLDTVESGH*VSMLCQVQLPCSLS Trigger: AGAGAGAGAGCAAGGCAATTGTACCTGACACAGCATTGACACCAAATGACCAGATTCCACTGTGTCCAACGGGAGCGACAAAACTGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS CCA 72 bp | GAACCGAGGATTATGAAGCCTGCTGGAAGCCTGGTATaGTATGGTTCTTCTCAGCTGTGGCTGCAGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: EPRIMKPAGSLV*YGSSQLWLQIS Trigger: AGAAATCTGCAGCCACAGCTGAGAAGAACCATACCATACCAGGCTTCCAGCAGGCTTCATAATCCTCGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336283.9 ENST00000520427.1 ENST00000523259.5 ENST00000602775.5 ENST00000602875.5 |
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| CDS GCA 72 bp | CGTTGGACACAGTGGAATCTGGTCATTTGGTGTCAATaGTGTGTCAGGTACAATTGCCTTGCTCTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RWTQWNLVIWCQ*CVRYNCLALSL Trigger: CAGAGAGAGAGCAAGGCAATTGTACCTGACACAGCATTGACACCAAATGACCAGATTCCACTGTGTCCAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602657.1 |
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| CDS CCA 72 bp | AATTCAACTCTTGTTCCCACAGCATCTTCTACTGATTaGTCTTCAAAAGTCTTATTAATGCTCCTGAAATCC | + |
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Preference number: 6 (lower is better) Translates to: NSTLVPTASSTD*SSKVLLMLLKS Trigger: GGATTTCAGGAGCATTAATAAGACTTTTGAAGACCAATCAGTAGAAGATGCTGTGGGAACAAGAGTTGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523259.5 |
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