RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SQOR (Homo sapiens)

Ensembl gene IDs: ENSG00000137767

Ensembl transcript IDs: ENST00000260324.12, ENST00000561493.5, ENST00000561735.5, ENST00000563296.1, ENST00000565227.1, ENST00000565997.1, ENST00000566934.1, ENST00000568606.5

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACTTGGTCACTGCTAATAATGAAGAAAAGAGGCTGCATCCCCTTTaGGTGGAGATGTGCTACAAATCCCTTTCCTCATCCAGGAACCAG +
Preference number: 1 (lower is better)
Translates to: HLVTANNEEKRLHPL*VEMCYKSLSSSRNQ
Trigger: CTGGTTCCTGGATGAGGAAAGGGATTTGTAGCACATCTCCACCCAAAGGGGATGCAGCCTCTTTTCTTCATTATTAGCAGTGACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
3UTR GCA 90 bp TATTATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTaGTGTTCAAAGGTACTGAAAAGGGAGGCATTTGGTCACCATTAC +
Preference number: 1 (lower is better)
Translates to: YYSQRIKPIMSSPHG*CSKVLKREAFGHHY
Trigger: GTAATGGTGACCAAATGCCTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR CCA 90 bp ATTTACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATaGAAGACAGAACACTTGGTCACTGCTAATAATGAAGAAAAGAGG +
Preference number: 1 (lower is better)
Translates to: IYYYYLSSSKRGPRA*KTEHLVTANNEEKR
Trigger: CCTCTTTTCTTCATTATTAGCAGTGACCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
3UTR-3UTR TCA 90 bp AAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGAGAAGCCATCCAAGATaGGCAAGTGCTGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: KPIMSSPHGCCSKVLKRERSHPR*ASAEPS
Trigger: GGATGGCTCAGCACTTGCTCATCTTGGATGGCTTCT...CTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR-3UTR TCA 90 bp ACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGAGAAGCCATCCAAGATaGGCAAGTGCTGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: TLYKDRFQVLRAALGHSVRSHPR*ASAEPS
Trigger: GGATGGCTCAGCACTTGCTCATCTTGGATGGCTTCT...CACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR-3UTR GCA 90 bp AAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGGTTCCAAGTCCTTCGTaGTGCTCTTGGTCATTCAGT +
Preference number: 2 (lower is better)
Translates to: KPIMSSPHGCCSKVLKREVPSPS*CSWSFS
Trigger: ACTGAATGACCAAGAGCAGCACGAAGGACTTGGAAC...CTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR-3UTR TCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGCTCTTGGTCATTCAGTaGCTGCAGTTTTGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRLLVIQ*LQFWPR
Trigger: TCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAG...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR-3UTR GCA 90 bp TCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGTGGTCATTCAGTGACTaGAGTTTTGGCCCAGAAGCC +
Preference number: 2 (lower is better)
Translates to: SPLPIKELFTRIGSKSFVWSFSD*SFGPEA
Trigger: GGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCA...CACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR-3UTR GCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGCCAAGTCCTTCGTGCTaGTCTTGGTCATTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRPSPSC*SWSFSD
Trigger: GTCACTGAATGACCAAGAGCAGCACGAAGGACTTGG...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR-3UTR GCA 90 bp ATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACACTTGGTCAATGAAGAAAAGAGGCTaGATCCCCTTTGGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: IYPAAKEGLEHGRQNTWSMKKRG*IPFGWR
Trigger: TCTCCACCCAAAGGGGATGCAGCCTCTTTTCTTCAT...TGACCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565997.1
3UTR-3UTR GCA 90 bp TGGAAGACAGAACACTTGGTCACTGCTAATAATGAAGAAAAGAGGCTGCATCCCCTTTGGGTGGAGATGTaGTACAAATCCCTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: WKTEHLVTANNEEKRLHPLWVEM*YKSLSS
Trigger: TGAGGAAAGGGATTTGTAGCACATCTCCACCCAAAG...GGGATGCAGCCTCTTTTCTTCATTATTAGCAGTGACCAAGTGTTCTGTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
3UTR GCA 72 bp CCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTaGAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAA +
Preference number: 3 (lower is better)
Translates to: PSPSCCSWSFSD*SFGPEAIQDEQ
Trigger: TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR-3UTR CAA 90 bp AAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGTCAGTGACTGCAGTTTaGGCCCAGAAGCCATCCAAG +
Preference number: 3 (lower is better)
Translates to: KPIMSSPHGCCSKVLKRESVTAV*AQKPSK
Trigger: CTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGA...CTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR-3UTR CAA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTCAGTGACTGCAGTTTaGGCCCAGAAGCCATCCAAG +
Preference number: 3 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRSVTAV*AQKPSK
Trigger: CTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGA...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR GCA 72 bp CAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTaGTGTTCAAAGGTACTGAAAAGGGAGGCATTTGGT +
Preference number: 3 (lower is better)
Translates to: QRIKPIMSSPHG*CSKVLKREAFG
Trigger: ACCAAATGCCTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTTGATTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR CCA 72 bp TGGTTGCTGTTCAAAGGTACTGAAAAGGGAGGCATTTaGTCACCATTACCCATCAAGGAACTCTTTACAAGG +
Preference number: 3 (lower is better)
Translates to: WLLFKGTEKGGI*SPLPIKELFTR
Trigger: CCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTTTCAGTACCTTTGAACAGCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR CCA 72 bp TATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATaGAAGACAGAACACTTGGTCACTGCTAATAATGAA +
Preference number: 3 (lower is better)
Translates to: YYLSSSKRGPRA*KTEHLVTANNE
Trigger: TTCATTATTAGCAGTGACCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR TCA 90 bp TGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATAGGGGGCCGACCTGCTaGGTGCCCAGCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CCSWSFSDCSFGPEAIQDRGPTC*VPSLSR
Trigger: CCTGCTCAGGCTGGGCACTCAGCAGGTCGGCCCCCT...ATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGGCAAGGGGGCCGACCTGCTaGGTGCCCAGCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PIMSSPHGCCSKVLKREARGPTC*VPSLSR
Trigger: CCTGCTCAGGCTGGGCACTCAGCAGGTCGGCCCCCT...TGCCTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGGCATGCGGGCAGCCATGGTaGTTCCGCCACTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PIMSSPHGCCSKVLKREACGQPW*FRHCPH
Trigger: GTGGGGGCAGTGGCGGAATCACCATGGCTGCCCGCA...TGCCTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGTGGTTCCTGGCCGCATaGCTGGCCCCGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSWSFSDCSFGPEAIQDEWFLAA*LAPVCS
Trigger: GCTGCACACCGGGGCCAGCCATGCGGCCAGGAACCA...CTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGCTGGGCACGGGGCCCTaGTACCACAGCCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PIKELFTRIGSKSFVLLLLGTGP*YHSHQW
Trigger: CCACTGGTGGCTGTGGTATCAGGGCCCCGTGCCCAG...CAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGGATCAGGCCGGGCGTaGGCGGAGCCTTCGGTCACT +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTGSGRA*AEPSVT
Trigger: AGTGACCGAAGGCTCCGCTCACGCCCGGCCTGATCC...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260324.12
CDS-3UTR TCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTTGCGGGCAGCCATGGTaGTTCCGCCACTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTCGQPW*FRHCPH
Trigger: GTGGGGGCAGTGGCGGAATCACCATGGCTGCCCGCA...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAATCCTGGCCGCATGGCTaGCCCCGGTGTGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQSWPHG*PRCAAE
Trigger: TTCAGCTGCACACCGGGGCCAGCCATGCGGCCAGGA...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGCTGGGCACGGGGCCCTaGTACCACAGCCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: YSQRIKPIMSSPHGCCSKLGTGP*YHSHQW
Trigger: CCACTGGTGGCTGTGGTATCAGGGCCCCGTGCCCAG...CTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCCACAGGACTGGTCTTaGGGACATCTGGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RFQVLRAALGHSVTAVLAPQDWS*GHLVGS
Trigger: TGAGCCCACCAGATGTCCTCAAGACCAGTCCTGTGG...GGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp TTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGGTCCAGCAAGCCCTGTaGCCGCTGTCTAGGCATACA +
Preference number: 4 (lower is better)
Translates to: FQVLRAALGHSVTAVLAQVQQAL*PLSRHT
Trigger: TGTATGCCTAGACAGCGGGCACAGGGCTTGCTGGAC...CTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568606.5
CDS-3UTR CCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCCTGGCCGCATGGCTaGCCCCGGTGTGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHSWPHG*PRCAAE
Trigger: TTCAGCTGCACACCGGGGCCAGCCATGCGGCCAGGA...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGCCTCATAATGGTTCCTaGCCGCATGGCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PIKELFTRIGSKSFVLLLPHNGS*PHGWPR
Trigger: CCGGGGCCAGCCATGCGGCCAGGAACCATTATGAGG...CAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCGTGAGGTTCCGCTCCTaGATGATCTCCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RFQVLRAALGHSVTAVLAVRFRS*MISCRA
Trigger: TGCCCTGCAGGAGATCATCCAGGAGCGGAACCTCAC...GGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAAGGTTCCGCTCCTGGATaGTCTCCTGCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQGSAPG*SPAGHL
Trigger: CAGATGCCCTGCAGGAGATCATCCAGGAGCGGAACC...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTGGTTCCGCTCCTGGATaGTCTCCTGCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVGSAPG*SPAGHL
Trigger: CAGATGCCCTGCAGGAGATCATCCAGGAGCGGAACC...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGTGCAGCAGCGGTCTTTaGCGTAGGAAGGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: FQVLRAALGHSVTAVLAQCSSGL*RRKVGA
Trigger: TGCACCAACCTTCCTACGTCAAAGACCGCTGCTGCA...CTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp TGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGGAGCCTTCGGTCACTaGGTTGGCGCAGCAAAAACC +
Preference number: 4 (lower is better)
Translates to: CCSWSFSDCSFGPEAIQDGAFGH*VGAAKT
Trigger: GGTTTTTGCTGCGCCAACGCAGTGACCGAAGGCTCC...ATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260324.12
CDS-3UTR CCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTAGGCAGGCAAAGAGCTaGGCACGGGGCCCTGATACC +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTRQAKS*ARGPDT
Trigger: GGTATCAGGGCCCCGTGCCCAGCTCTTTGCCTGCCT...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAAGGTGAGGTTCCGCTCCTaGATGATCTCCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGHSVTAVLAQKPSKMSKVRFRS*MISCRA
Trigger: TGCCCTGCAGGAGATCATCCAGGAGCGGAACCTCAC...CTTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATCTTGCGCAGAAACGCTaGTCCTCCCCAGTAACCCCT +
Preference number: 4 (lower is better)
Translates to: CCSWSFSDCSFGPEAIQDLAQKR*SSPVTP
Trigger: AGGGGTTACTGGGGAGGACCAGCGTTTCTGCGCAAG...ATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCGTGGGACGACCAGATaGGGACAATTGTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: CSWSFSDCSFGPEAIQDERGTTR*GQLFGT
Trigger: GGTGCCAAACAATTGTCCTCATCTGGTCGTCCCACG...CTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTCCACAGGACTGGTCTTaGGGACATCTGGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVPQDWS*GHLVGS
Trigger: TGAGCCCACCAGATGTCCTCAAGACCAGTCCTGTGG...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGTGCAGCAGCGGTCTTTaGCGTAGGAAGGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: CSWSFSDCSFGPEAIQDECSSGL*RRKVGA
Trigger: TGCACCAACCTTCCTACGTCAAAGACCGCTGCTGCA...CTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTAGGCAGGCAAAGAGCTaGGCACGGGGCCCTGATACC +
Preference number: 4 (lower is better)
Translates to: KELFTRIGSKSFVLLLVIRQAKS*ARGPDT
Trigger: GGTATCAGGGCCCCGTGCCCAGCTCTTTGCCTGCCT...AATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGCCTCATAATGGTTCCTaGCCGCATGGCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRPHNGS*PHGWPR
Trigger: CCGGGGCCAGCCATGCGGCCAGGAACCATTATGAGG...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAACGTGGGACGACCAGATaGGGACAATTGTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQRGTTR*GQLFGT
Trigger: GGTGCCAAACAATTGTCCTCATCTGGTCGTCCCACG...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGTCGTCGTCATCTGTGTaGATGCAGTTCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FQVLRAALGHSVTAVLAQSSSSV*MQFLSG
Trigger: CCCAGACAAGAACTGCATTCACACAGATGACGACGA...CTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGGCAAGAAGCCATCCAAGATaGGCAAGTGCTGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: PIMSSPHGCCSKVLKREARSHPR*ASAEPS
Trigger: GGATGGCTCAGCACTTGCTCATCTTGGATGGCTTCT...TGCCTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCGAATCAAGCCCATCATaGGTAGCCCACATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RFQVLRAALGHSVTAVLAESSPS*VAHMVA
Trigger: AGCAACCATGTGGGCTACTCATGATGGGCTTGATTC...GGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp ATCCCCTTTGGGTGGAGATGTGCTACAAATCCCTTTCCTCATCCAGGAACCAGGAGGCTGCATCCCCTTTaGGTGGAGATGTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: IPFGWRCATNPFPHPGTRRLHPL*VEMCYK
Trigger: TTTGTAGCACATCTCCACCCAAAGGGGATGCAGCCT...CCTGGTTCCTGGATGAGGAAAGGGATTTGTAGCACATCTCCACCCAAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR CCA 90 bp TTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGCATACAAGTACCATGTaGCTGGGGAGGCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FQVLRAALGHSVTAVLAQHTSTM*LGRPQN
Trigger: ATTCTGAGGCCTCCCCAGCCACATGGTACTTGTATG...CTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568606.5
CDS-3UTR TCA 90 bp TGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATAAGTACATGATCTTCTaGGGGGCTCCAGCACACTTC +
Preference number: 4 (lower is better)
Translates to: CCSWSFSDCSFGPEAIQDKYMIF*GAPAHF
Trigger: GAAGTGTGCTGGAGCCCCTCAGAAGATCATGTACTT...ATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAACCTATCAAGTATTCCTaGCTGGGCAGCTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQPIKYS*LGSYCS
Trigger: GCTGCAGTAGCTGCCCAGTCAGGAATACTTGATAGG...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp TGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATTGGTCATTCAGTGACTaGAGTTTTGGCCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CCSWSFSDCSFGPEAIQDWSFSD*SFGPEA
Trigger: GGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCA...ATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTCTTCGGTCACTGCGTTaGCGCAGCAAAAACCTTCGC +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTLRSLR*RSKNLR
Trigger: GCGAAGGTTTTTGCTGCGCCAACGCAGTGACCGAAG...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260324.12
CDS-3UTR CCA 90 bp TGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCCATTCTACACCAGATaGAATCACACTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: CSWSFSDCSFGPEAIQDEPFYTR*NHTCRG
Trigger: CCCACGGCAAGTGTGATTCCATCTGGTGTAGAATGG...CTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCACTTGGGTCTCTCCTaGTTTGTCCAGGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RFQVLRAALGHSVTAVLAHLGLS*FVQVLK
Trigger: TTTGAGAACCTGGACAAACCAGGAGAGACCCAAGTG...GGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGGTCTTGAGGACATCTaGTGGGCTCATTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: PIKELFTRIGSKSFVLLLGLEDI*WAHWRC
Trigger: ACACCTCCAATGAGCCCACCAGATGTCCTCAAGACC...CAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TCCCCTTTGGGTGGAGATGTGCTACAAATCCCTTTCCTCATCCAGGAACCAGGCAATCCCAAACACATTTaGGTACCTCCTGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SPLGGDVLQIPFLIQEPGNPKHI*VPPVLQ
Trigger: CTGCAACACAGGAGGTACCCAAATGTGTTTGGGATT...GCCTGGTTCCTGGATGAGGAAAGGGATTTGTAGCACATCTCCACCCAAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR TCA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTCGTCGTCATCTGTGTaGATGCAGTTCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVSSSSV*MQFLSG
Trigger: CCCAGACAAGAACTGCATTCACACAGATGACGACGA...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAAGACCCTATTTTGGGATaGGCGAAACCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQDPILG*AKPSGR
Trigger: CCTACCTGAAGGTTTCGCTCATCCCAAAATAGGGTC...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGTATTTGGGAAGGTaGAGATGGCATTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CCSWSFSDCSFGPEAIQDEYLGR*RWHCPL
Trigger: AAGAGGGCAATGCCATCTTCACCTTCCCAAATACTC...ATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGGCTTCCCTGTCTTCCTaGAGTAGGCTTCTGATAAGT +
Preference number: 4 (lower is better)
Translates to: CSWSFSDCSFGPEAIQDEASLSS*SRLLIS
Trigger: ACTTATCAGAAGCCTACTTCAGGAAGACAGGGAAGC...CTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCGGCTCATTGGAGGTGTaGCATGAAGCATTTCATATG +
Preference number: 4 (lower is better)
Translates to: RFQVLRAALGHSVTAVLAGSLEV*HEAFHM
Trigger: CATATGAAATGCTTCATGTCACACCTCCAATGAGCC...GGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp ACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGCCTATCAAGTATTCCTaGCTGGGCAGCTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLYKDRFQVLRAALGHSVPIKYS*LGSYCS
Trigger: GCTGCAGTAGCTGCCCAGTCAGGAATACTTGATAGG...CACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATAGAAGCCATCCAAGATaGGCAAGTGCTGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHRSHPR*ASAEPS
Trigger: GGATGGCTCAGCACTTGCTCATCTTGGATGGCTTCT...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTCTCCTGCAGGGCATCTaGATACTTCTTAACCCCGAA +
Preference number: 4 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVLLQGI*ILLNPE
Trigger: TTCGGGGTTAAGAAGTATGCAGATGCCCTGCAGGAG...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCGGGTACCTCCTGTGTTaGAGAGTTTCTTTATCCACA +
Preference number: 4 (lower is better)
Translates to: RFQVLRAALGHSVTAVLAGYLLC*RVSLST
Trigger: TGTGGATAAAGAAACTCTGCAACACAGGAGGTACCC...GGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp CCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGGCACTAGATGAAACAACTTaGGCAGAAACGCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PIMSSPHGCCSKVLKREALDETT*AETLVL
Trigger: GAGGACCAGCGTTTCTGCGCAAGTTGTTTCATCTAG...TGCCTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTGGTCATTCAGTGACTaGAGTTTTGGCCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVWSFSD*SFGPEA
Trigger: GGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCA...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTCCAAGTCCTTCGTGCTaGTCTTGGTCATTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVPSPSC*SWSFSD
Trigger: GTCACTGAATGACCAAGAGCAGCACGAAGGACTTGG...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp ATCCCCTTTGGGTGGAGATGTGCTACAAATCCCTTTCCTCATCCAGGAACCAGGCTTTGGGTGGAGATGTaGTACAAATCCCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: IPFGWRCATNPFPHPGTRLWVEM*YKSLSS
Trigger: TGAGGAAAGGGATTTGTAGCACATCTCCACCCAAAG...CCTGGTTCCTGGATGAGGAAAGGGATTTGTAGCACATCTCCACCCAAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR CCA 90 bp TGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATCACCAGTGTCCAGATTaGCTGGTAGAAATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: CCSWSFSDCSFGPEAIQDHQCPD*LVEMSL
Trigger: GAGAGACATTTCTACCAGCCAATCTGGACACTGGTG...ATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGATGAGGACAATTGTTTaGCACCAGCACCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: KPIMSSPHGCCSKVLKREMRTIV*HQHPPV
Trigger: CACTGGTGGGTGCTGGTGCCAAACAATTGTCCTCAT...CTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGAATCACACTTGCCGTaGGACGACCAGATGAGGACA +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTESHLP*DDQMRT
Trigger: TGTCCTCATCTGGTCGTCCCACGGCAAGTGTGATTC...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATGAATCACACTTGCCGTaGGACGACCAGATGAGGACA +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHESHLP*DDQMRT
Trigger: TGTCCTCATCTGGTCGTCCCACGGCAAGTGTGATTC...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGCCATTCTACACCAGATaGAATCACACTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: KPIMSSPHGCCSKVLKREPFYTR*NHTCRG
Trigger: CCCACGGCAAGTGTGATTCCATCTGGTGTAGAATGG...CTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGGTCTTGAGGACATCTaGTGGGCTCATTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTGLEDI*WAHWRC
Trigger: ACACCTCCAATGAGCCCACCAGATGTCCTCAAGACC...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp ACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGTCAAGTATTCCTGACTaGGCAGCTACTGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: TLYKDRFQVLRAALGHSVSSIPD*AATAAA
Trigger: CGCTGCTGCAGTAGCTGCCCAGTCAGGAATACTTGA...CACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp GAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTCAAGTATTCCTGACTaGGCAGCTACTGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ELFTRIGSKSFVLLLVIQSSIPD*AATAAA
Trigger: CGCTGCTGCAGTAGCTGCCCAGTCAGGAATACTTGA...CTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp GAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGCAAGTACCATGTGGCTaGGGAGGCCTCAGAATCATG +
Preference number: 4 (lower is better)
Translates to: ELFTRIGSKSFVLLLVIQQVPCG*GGLRIM
Trigger: CATGATTCTGAGGCCTCCCCAGCCACATGGTACTTG...CTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568606.5
CDS-3UTR TCA 90 bp CCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGAGTATTTGGGAAGGTaGAGATGGCATTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: PIKELFTRIGSKSFVLLLEYLGR*RWHCPL
Trigger: AAGAGGGCAATGCCATCTTCACCTTCCCAAATACTC...CAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTAAGTACATGATCTTCTaGGGGGCTCCAGCACACTTC +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTKYMIF*GAPAHF
Trigger: GAAGTGTGCTGGAGCCCCTCAGAAGATCATGTACTT...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGGCTTCCCTGTCTTCCTaGAGTAGGCTTCTGATAAGT +
Preference number: 4 (lower is better)
Translates to: KPIMSSPHGCCSKVLKREASLSS*SRLLIS
Trigger: ACTTATCAGAAGCCTACTTCAGGAAGACAGGGAAGC...CTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp ATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACACTTGGCCTATCAAGTATTCCTaGCTGGGCAGCTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: IIYPAAKEGLEHGRQNTWPIKYS*LGSYCS
Trigger: GCTGCAGTAGCTGCCCAGTCAGGAATACTTGATAGG...CCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR GCA 90 bp CTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAAGCGTCATCTGTGTGAATaGAGTTCTTGTCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LGHSVTAVLAQKPSKMSKRHLCE*SSCLGS
Trigger: TGAACCCAGACAAGAACTGCATTCACACAGATGACG...CTTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTGGAAAGGCGCTCTTTaGTTTGATCAAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVWKGAL*FDQRGR
Trigger: CCTTCCCCTTTGATCAAAGCAAAGAGCGCCTTTCCA...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCAGTAGCCCACATGGTTaGTGTTCAAAGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: RFQVLRAALGHSVTAVLASSPHG*CSKVLK
Trigger: TTTCAGTACCTTTGAACAGCAACCATGTGGGCTACT...GGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCACTGGGCTCAACAATaGCCACATTCTCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: SPLPIKELFTRIGSKSFVHWAQQ*PHSLHP
Trigger: TGGGTGCAGAGAATGTGGCCATTGTTGAGCCCAGTG...CACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGCACCAGTGTCCAGATTaGCTGGTAGAAATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PIKELFTRIGSKSFVLLLHQCPD*LVEMSL
Trigger: GAGAGACATTTCTACCAGCCAATCTGGACACTGGTG...CAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTATGAGGACAATTGTTTaGCACCAGCACCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTMRTIV*HQHPPV
Trigger: CACTGGTGGGTGCTGGTGCCAAACAATTGTCCTCAT...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGCACTTGGGTCTCTCCTaGTTTGTCCAGGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PIKELFTRIGSKSFVLLLHLGLS*FVQVLK
Trigger: TTTGAGAACCTGGACAAACCAGGAGAGACCCAAGTG...CAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAAATCTGGTGGGCTCATTaGAGGTGTGACATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQIWWAH*RCDMKH
Trigger: ATGCTTCATGTCACACCTCCAATGAGCCCACCAGAT...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGGACCCTATTTTGGGATaGGCGAAACCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SPLPIKELFTRIGSKSFVDPILG*AKPSGR
Trigger: CCTACCTGAAGGTTTCGCTCATCCCAAAATAGGGTC...CACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATGGTCACCAGTGGACATaGTGTGTAGCCATCATACTT +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHGHQWT*CVAIIL
Trigger: AAGTATGATGGCTACACATCATGTCCACTGGTGACC...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTTCAGGTCAGCTTTCATaGGATACATGGAAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTSGQLS*DTWKGA
Trigger: AGCGCCTTTCCATGTATCTCATGAAAGCTGACCTGA...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp ATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACACTTGGTCATCAGGTCAGCTTTCATaGGATACATGGAAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: IYPAAKEGLEHGRQNTWSSGQLS*DTWKGA
Trigger: AGCGCCTTTCCATGTATCTCATGAAAGCTGACCTGA...TGACCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR TCA 90 bp TATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGCTCTTGGTCATTCAGTaGCTGCAGTTTTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: YSQRIKPIMSSPHGCCSKLLVIQ*LQFWPR
Trigger: TCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAG...CTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGGAATCAAGCCCATCATaGGTAGCCCACATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRESSPS*VAHMVA
Trigger: AGCAACCATGTGGGCTACTCATGATGGGCTTGATTC...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp GAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGCCCTCTTTGAAGTCCTaGAGAGCTTTCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: ELFTRIGSKSFVLLLVIQPSLKS*RAFHVF
Trigger: GAAGACATGGAAAGCTCTGCAGGACTTCAAAGAGGG...CTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGCTCCTGCAGGGCATCTaGATACTTCTTAACCCCGAA +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRLLQGI*ILLNPE
Trigger: TTCGGGGTTAAGAAGTATGCAGATGCCCTGCAGGAG...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTCCTGGATGATCTCCTaGAGGGCATCTGCATACTTC +
Preference number: 4 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGSWMIS*RASAYF
Trigger: GAAGTATGCAGATGCCCTGCAGGAGATCATCCAGGA...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTCCTGGATGATCTCCTaGAGGGCATCTGCATACTTC +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRSWMIS*RASAYF
Trigger: GAAGTATGCAGATGCCCTGCAGGAGATCATCCAGGA...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp GAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGGAAAGGCGCTCTTTaGTTTGATCAAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELFTRIGSKSFVLLLVIQWKGAL*FDQRGR
Trigger: CCTTCCCCTTTGATCAAAGCAAAGAGCGCCTTTCCA...CTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTCCAAGTCCTTCGTGCTaGTCTTGGTCATTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGPSPSC*SWSFSD
Trigger: GTCACTGAATGACCAAGAGCAGCACGAAGGACTTGG...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATGTTCCAAGTCCTTCGTaGTGCTCTTGGTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHVPSPS*CSWSFS
Trigger: ACTGAATGACCAAGAGCAGCACGAAGGACTTGGAAC...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp ACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGATCTGGTGGGCTCATTaGAGGTGTGACATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: TLYKDRFQVLRAALGHSVIWWAH*RCDMKH
Trigger: ATGCTTCATGTCACACCTCCAATGAGCCCACCAGAT...CACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAAGAAAAGGGAGGCATTTaGTCACCATTACCCATCAAG +
Preference number: 4 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQEKGGI*SPLPIK
Trigger: CTTGATGGGTAATGGTGACCAAATGCCTCCCTTTTC...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGCATTCTTTCATCTGGTaGATATTCTCTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FQVLRAALGHSVTAVLAQHSFIW*IFSESL
Trigger: CAAGGACTCAGAGAATATCCACCAGATGAAAGAATG...CTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568606.5
CDS-3UTR TCA 90 bp TATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGCTTCTGATAAGTACATaGTCTTCTGAGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YSQRIKPIMSSPHGCCSKLLIST*SSEGLQ
Trigger: CTGGAGCCCCTCAGAAGATCATGTACTTATCAGAAG...CTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTCTTCTGATAAGTACATaGTCTTCTGAGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGLLIST*SSEGLQ
Trigger: CTGGAGCCCCTCAGAAGATCATGTACTTATCAGAAG...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGGGTCACCAGTGGACATaGTGTGTAGCCATCATACTT +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRGHQWT*CVAIIL
Trigger: AAGTATGATGGCTACACATCATGTCCACTGGTGACC...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp AAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTTCAGGTCAGCTTTCATaGGATACATGGAAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KELFTRIGSKSFVLLLVISGQLS*DTWKGA
Trigger: AGCGCCTTTCCATGTATCTCATGAAAGCTGACCTGA...AATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATAAGATGAGCAAGTGCTaGGCCATCCTTAACTCATAC +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHKMSKC*AILNSY
Trigger: GTATGAGTTAAGGATGGCTCAGCACTTGCTCATCTT...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGCCCTCTTTGAAGTCCTaGAGAGCTTTCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRPSLKS*RAFHVF
Trigger: GAAGACATGGAAAGCTCTGCAGGACTTCAAAGAGGG...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp ATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACACTTGGTCAGGGTACCTCCTGTGTTaGAGAGTTTCTTTATCCACA +
Preference number: 4 (lower is better)
Translates to: IYPAAKEGLEHGRQNTWSGYLLC*RVSLST
Trigger: TGTGGATAAAGAAACTCTGCAACACAGGAGGTACCC...TGACCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR GCA 90 bp TGGAAGACAGAACACTTGGTCACTGCTAATAATGAAGAAAAGAGGCTGCATCCCTGGAAAGGCGCTCTTTaGTTTGATCAAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WKTEHLVTANNEEKRLHPWKGAL*FDQRGR
Trigger: CCTTCCCCTTTGATCAAAGCAAAGAGCGCCTTTCCA...GGGATGCAGCCTCTTTTCTTCATTATTAGCAGTGACCAAGTGTTCTGTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR GCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGCTAGATGAAACAACTTaGGCAGAAACGCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRLDETT*AETLVL
Trigger: GAGGACCAGCGTTTCTGCGCAAGTTGTTTCATCTAG...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp TCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGGTTCCAAGTCCTTCGTaGTGCTCTTGGTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: SPLPIKELFTRIGSKSFVVPSPS*CSWSFS
Trigger: ACTGAATGACCAAGAGCAGCACGAAGGACTTGGAAC...CACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATAGAAATGTCTCTCACTaGGCTCAACAATGGCCACAT +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHRNVSH*AQQWPH
Trigger: ATGTGGCCATTGTTGAGCCCAGTGAGAGACATTTCT...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CATGGAAGACAGAACACTTGGTCACTGCTAATAATGAAGAAAAGAGGCTGCATCAGAGGGCCTAGAGCATaGAAGACAGAACACTTGGTC +
Preference number: 4 (lower is better)
Translates to: HGRQNTWSLLIMKKRGCIRGPRA*KTEHLV
Trigger: GACCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCT...GATGCAGCCTCTTTTCTTCATTATTAGCAGTGACCAAGTGTTCTGTCTTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR TCA 90 bp TATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGGCTCATTGGAGGTGTaGCATGAAGCATTTCATATG +
Preference number: 4 (lower is better)
Translates to: YSQRIKPIMSSPHGCCSKGSLEV*HEAFHM
Trigger: CATATGAAATGCTTCATGTCACACCTCCAATGAGCC...CTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp ATTTACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACATGCAGCAGCGGTCTTTaGCGTAGGAAGGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: IYYYYLSSSKRGPRAWKTCSSGL*RRKVGA
Trigger: TGCACCAACCTTCCTACGTCAAAGACCGCTGCTGCA...TGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR TCA 90 bp TCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGAAGATGAGCAAGTGCTaGGCCATCCTTAACTCATAC +
Preference number: 4 (lower is better)
Translates to: SPLPIKELFTRIGSKSFVKMSKC*AILNSY
Trigger: GTATGAGTTAAGGATGGCTCAGCACTTGCTCATCTT...CACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTCGTCATCTGTGTGAATaGAGTTCTTGTCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGRHLCE*SSCLGS
Trigger: TGAACCCAGACAAGAACTGCATTCACACAGATGACG...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp ACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGAGTAGCCCACATGGTTaGTGTTCAAAGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: TLYKDRFQVLRAALGHSVSSPHG*CSKVLK
Trigger: TTTCAGTACCTTTGAACAGCAACCATGTGGGCTACT...CACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATAATTCGACCCTATTTTaGGATGAGCGAAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHNSTLF*DERNLQ
Trigger: CTGAAGGTTTCGCTCATCCCAAAATAGGGTCGAATT...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTTCATATGAAATCACTTaGGTCTCTCCTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTSYEIT*VSPGLS
Trigger: GGACAAACCAGGAGAGACCCAAGTGATTTCATATGA...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTAATCCCAAACACATTTaGGTACCTCCTGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: KELFTRIGSKSFVLLLVINPKHI*VPPVLQ
Trigger: CTGCAACACAGGAGGTACCCAAATGTGTTTGGGATT...AATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTGAAAAGGGAGGCATTTaGTCACCATTACCCATCAAG +
Preference number: 4 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGEKGGI*SPLPIK
Trigger: CTTGATGGGTAATGGTGACCAAATGCCTCCCTTTTC...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
3UTR CAA 72 bp AGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACACTaGGTCACTGCTAATAATGAAGAAAAGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SKRGPRAWKTEH*VTANNEEKRLH
Trigger: ATGCAGCCTCTTTTCTTCATTATTAGCAGTGACCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR TCA 90 bp ACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGATGAAGCATTTCATATaGAATCACTTGGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TLYKDRFQVLRAALGHSVMKHFI*NHLGLS
Trigger: GGAGAGACCCAAGTGATTTCATATGAAATGCTTCAT...CACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp CCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGATTGGAGGTGTGACATaGAGCATTTCATATGAAATC +
Preference number: 4 (lower is better)
Translates to: PIKELFTRIGSKSFVLLLIGGVT*SISYEI
Trigger: GATTTCATATGAAATGCTTCATGTCACACCTCCAAT...CAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp ATTTCATTTTATTATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTCACTGGGCTCAACAATaGCCACATTCTCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: ISFYYSQRIKPIMSSPHGHWAQQ*PHSLHP
Trigger: TGGGTGCAGAGAATGTGGCCATTGTTGAGCCCAGTG...ACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATAATAAAATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTAATGCAGTTCTTGTCTaGGTTCAACTCAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGNAVLV*VQLSHS
Trigger: AGAGTGACTGAGTTGAACCCAGACAAGAACTGCATT...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp TATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGAATGCAGTTCTTGTCTaGGTTCAACTCAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: YSQRIKPIMSSPHGCCSKNAVLV*VQLSHS
Trigger: AGAGTGACTGAGTTGAACCCAGACAAGAACTGCATT...CTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGAATTCGACCCTATTTTaGGATGAGCGAAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRNSTLF*DERNLQ
Trigger: CTGAAGGTTTCGCTCATCCCAAAATAGGGTCGAATT...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp AAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTTCATATGAAATCACTTaGGTCTCTCCTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KELFTRIGSKSFVLLLVISYEIT*VSPGLS
Trigger: GGACAAACCAGGAGAGACCCAAGTGATTTCATATGA...AATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp ATTTACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACATCAAGTATTCCTGACTaGGCAGCTACTGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: IYYYYLSSSKRGPRAWKTSSIPD*AATAAA
Trigger: CGCTGCTGCAGTAGCTGCCCAGTCAGGAATACTTGA...TGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR CCA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATAGTCATTCTTTCATCTaGTGGATATTCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHSHSFI*WIFSES
Trigger: GGACTCAGAGAATATCCACCAGATGAAAGAATGACT...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568606.5
CDS-3UTR CCA 90 bp TACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAATGCATCCCCTTTGGGTaGAGATGTGCTACAAATCCC +
Preference number: 4 (lower is better)
Translates to: YYYYLSSSKRGPRAWKTECIPFG*RCATNP
Trigger: GGGATTTGTAGCACATCTCCACCCAAAGGGGATGCA...TTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR TCA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGATGAAGCATTTCATATaGAATCACTTGGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRMKHFI*NHLGLS
Trigger: GGAGAGACCCAAGTGATTTCATATGAAATGCTTCAT...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp GAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGATTGGAGGTGTGACATaGAGCATTTCATATGAAATC +
Preference number: 4 (lower is better)
Translates to: ELFTRIGSKSFVLLLVIQIGGVT*SISYEI
Trigger: GATTTCATATGAAATGCTTCATGTCACACCTCCAAT...CTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR TCA 90 bp TACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAAGGTCACCAGTGGACATaGTGTGTAGCCATCATACTT +
Preference number: 4 (lower is better)
Translates to: YYYYLSSSKRGPRAWKTEGHQWT*CVAIIL
Trigger: AAGTATGATGGCTACACATCATGTCCACTGGTGACC...TTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR TCA 90 bp ATTTCATTTTATTATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTCTCTTGGTCATTCAGTaGCTGCAGTTTTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ISFYYSQRIKPIMSSPHGLLVIQ*LQFWPR
Trigger: TCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAG...ACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATAATAAAATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR GCA 90 bp TACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACCAGGAACCAGGCAGTaGACTTACCTTAGCATCATA +
Preference number: 4 (lower is better)
Translates to: YYYYLSSSKRGPRAWKTEPGTRQ*TYLSII
Trigger: TATGATGCTAAGGTAAGTGCACTGCCTGGTTCCTGG...TTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR GCA 90 bp TACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAAATGAAGAAAAGAGGCTaGATCCCCTTTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: YYYYLSSSKRGPRAWKTEMKKRG*IPFGWR
Trigger: TCTCCACCCAAAGGGGATGCAGCCTCTTTTCTTCAT...TTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR GCA 90 bp ATTTCATTTTATTATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTGGGTACCTCCTGTGTTaGAGAGTTTCTTTATCCACA +
Preference number: 4 (lower is better)
Translates to: ISFYYSQRIKPIMSSPHGGYLLC*RVSLST
Trigger: TGTGGATAAAGAAACTCTGCAACACAGGAGGTACCC...ACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATAATAAAATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp ATTTCATTTTATTATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTCCAGCACACTTCACTaGAGTATTTGGGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ISFYYSQRIKPIMSSPHGSSTLH*SIWEGE
Trigger: TTCACCTTCCCAAATACTCCAGTGAAGTGTGCTGGA...ACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATAATAAAATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CCA 90 bp ATTTCATTTTATTATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTAATCCCAAACACATTTaGGTACCTCCTGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ISFYYSQRIKPIMSSPHGNPKHI*VPPVLQ
Trigger: CTGCAACACAGGAGGTACCCAAATGTGTTTGGGATT...ACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATAATAAAATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS CCA 90 bp GAGCGCTCACGGGGCACAGAACCAGGAACAAGCGTCCATCCGGCCTaGGGTGCTGCCGGCTGGACAGACTCGCCCCTTGCGCGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: ERSRGTEPGTSVHPA*GAAGWTDSPLARPE
Trigger: TTCAGGGCGCGCAAGGGGCGAGTCTGTCCAGCCGGCAGCACCCCAGGCCGGATGGACGCTTGTTCCTGGTTCTGTGCCCCGTGAGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561735.5
CDS CCA 90 bp AGGCAGGATCAGGCCGGGCGTGAGCGGAGCCTTCGGTCACTGCGTTaGCGCAGCAAAAACCTTCGCTCCCTTCTGGGTCTCAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RQDQAGRERSLRSLR*RSKNLRSLLGLKAW
Trigger: CCAGGCCTTGAGACCCAGAAGGGAGCGAAGGTTTTTGCTGCGCCAACGCAGTGACCGAAGGCTCCGCTCACGCCCGGCCTGATCCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260324.12
CDS GCA 90 bp TCTTCAGGCAGGATCAGGCCGGGCGTGAGCGGAGCCTTCGGTCACTaGGTTGGCGCAGCAAAAACCTTCGCTCCCTTCTGGGTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: SSGRIRPGVSGAFGH*VGAAKTFAPFWVSR
Trigger: CCTTGAGACCCAGAAGGGAGCGAAGGTTTTTGCTGCGCCAACGCAGTGACCGAAGGCTCCGCTCACGCCCGGCCTGATCCTGCCTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260324.12
CDS CCA 90 bp AGCAAGCCCTGTGCCCGCTGTCTAGGCATACAAGTACCATGTGGCTaGGGAGGCCTCAGAATCATGGAGGGAGGCGAAAGGCGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: SKPCARCLGIQVPCG*GGLRIMEGGERRFL
Trigger: TAAGAAGCGCCTTTCGCCTCCCTCCATGATTCTGAGGCCTCCCCAGCCACATGGTACTTGTATGCCTAGACAGCGGGCACAGGGCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568606.5
CDS-3UTR CAA 90 bp AGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCGCCACAGGACTGGTCTaGAGGACATCTGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RFQVLRAALGHSVTAVLAATGLV*RTSGGL
Trigger: GAGCCCACCAGATGTCCTCAAGACCAGTCCTGTGGC...GGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS GCA 90 bp CTGGTAGAAATGTCTCTCACTGGGCTCAACAATGGCCACATTCTCTaGACCCACTTTCCTCTTCATGCGGGCAGCCATGGTGATTCCGCC +
Preference number: 5 (lower is better)
Translates to: LVEMSLTGLNNGHIL*THFPLHAGSHGDSA
Trigger: GGCGGAATCACCATGGCTGCCCGCATGAAGAGGAAAGTGGGTGCAGAGAATGTGGCCATTGTTGAGCCCAGTGAGAGACATTTCTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS TCA 90 bp CCATTCTACACCAGATGGAATCACACTTGCCGTGGGACGACCAGATaGGGACAATTGTTTGGCACCAGCACCCACCAGTGTCCAGATTGG +
Preference number: 5 (lower is better)
Translates to: PFYTRWNHTCRGTTR*GQLFGTSTHQCPDW
Trigger: CCAATCTGGACACTGGTGGGTGCTGGTGCCAAACAATTGTCCTCATCTGGTCGTCCCACGGCAAGTGTGATTCCATCTGGTGTAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS TCA 90 bp CAGGATCAGGTCATGCAGTCATTCTTTCATCTGGTGGATATTCTCTaGGTCCTTGCCTTCTGTGTCCAGCAAGCCCTGTGCCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QDQVMQSFFHLVDIL*VLAFCVQQALCPLS
Trigger: AGACAGCGGGCACAGGGCTTGCTGGACACAGAAGGCAAGGACTCAGAGAATATCCACCAGATGAAAGAATGACTGCATGACCTGATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565227.1
ENST00000568606.5
CDS GCA 90 bp TCCGGGAGAAGGAAAATAAATCCAAATCAGGGCTCTGGGAAGATTTaGAGACACGTGGGCAGGAAGGGCTGGCAACAGGAATGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: SGRRKINPNQGSGKI*RHVGRKGWQQEWVE
Trigger: TTCCACCCATTCCTGTTGCCAGCCCTTCCTGCCCACGTGTCTGCAAATCTTCCCAGAGCCCTGATTTGGATTTATTTTCCTTCTCCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563296.1
ENST00000565227.1
CDS CCA 90 bp ATGGAATCACACTTGCCGTGGGACGACCAGATGAGGACAATTGTTTaGCACCAGCACCCACCAGTGTCCAGATTGGCTGGTAGAAATGTC +
Preference number: 5 (lower is better)
Translates to: MESHLPWDDQMRTIV*HQHPPVSRLAGRNV
Trigger: GACATTTCTACCAGCCAATCTGGACACTGGTGGGTGCTGGTGCCAAACAATTGTCCTCATCTGGTCGTCCCACGGCAAGTGTGATTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS CCA 90 bp AATCAGGGCTCTGGGAAGATTTGCAGACACGTGGGCAGGAAGGGCTaGCAACAGGAATGGGTGGAAATAGAGAATGGAACAGTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: NQGSGKICRHVGRKG*QQEWVEIENGTVKG
Trigger: CCCTTTCACTGTTCCATTCTCTATTTCCACCCATTCCTGTTGCCAGCCCTTCCTGCCCACGTGTCTGCAAATCTTCCCAGAGCCCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563296.1
ENST00000565227.1
CDS GCA 90 bp TTGGTGCAGTCCCCAATCCCAAACACATTTGGGTACCTCCTGTGTTaGAGAGTTTCTTTATCCACATCCACCCAACCAGCAGCATCAGCC +
Preference number: 5 (lower is better)
Translates to: LVQSPIPNTFGYLLC*RVSLSTSTQPAASA
Trigger: GGCTGATGCTGCTGGTTGGGTGGATGTGGATAAAGAAACTCTGCAACACAGGAGGTACCCAAATGTGTTTGGGATTGGGGACTGCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000565997.1
ENST00000568606.5
CDS CCA 90 bp GCACCATCTTCAGGCAGGATCAGGTCATGCAGTCATTCTTTCATCTaGTGGATATTCTCTGAGTCCTTGCCTTCTGTGTCCAGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: APSSGRIRSCSHSFI*WIFSESLPSVSSKP
Trigger: GGGCTTGCTGGACACAGAAGGCAAGGACTCAGAGAATATCCACCAGATGAAAGAATGACTGCATGACCTGATCCTGCCTGAAGATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565227.1
ENST00000568606.5
CDS-3UTR CAA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAACAGATGGAATCACACTaGCCGTGGGACGACCAGATG +
Preference number: 5 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQQMESH*PWDDQM
Trigger: CATCTGGTCGTCCCACGGCAAGTGTGATTCCATCTG...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGTTTGACGTAGGAAGGTaGGTGCAGTCCCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: CSWSFSDCSFGPEAIQDEFDVGR*VQSPIP
Trigger: TGGGATTGGGGACTGCACCAACCTTCCTACGTCAAA...CTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp CCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGGCATCAGTGACTGCAGTTTaGGCCCAGAAGCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: PIMSSPHGCCSKVLKREASVTAV*AQKPSK
Trigger: CTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGA...TGCCTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS CCA 90 bp CCATCTTCAGGCAGGATCAGGTCATGCAGTCATTCTTTCATCTGGTaGATATTCTCTGAGTCCTTGCCTTCTGTGTCCAGCAAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: PSSGRIRSCSHSFIW*IFSESLPSVSSKPC
Trigger: ACAGGGCTTGCTGGACACAGAAGGCAAGGACTCAGAGAATATCCACCAGATGAAAGAATGACTGCATGACCTGATCCTGCCTGAAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565227.1
ENST00000568606.5
CDS-3UTR CAA 90 bp CTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAAGCCACCAGTGTCCAGATaGGCTGGTAGAAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: LGHSVTAVLAQKPSKMSKPPVSR*AGRNVS
Trigger: AGAGACATTTCTACCAGCCAATCTGGACACTGGTGG...CTTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTGATGAGGACAATTGTTaGGCACCAGCACCCACCAGT +
Preference number: 5 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVDEDNC*APAPTS
Trigger: ACTGGTGGGTGCTGGTGCCAAACAATTGTCCTCATC...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAAGATGAGGACAATTGTTaGGCACCAGCACCCACCAGT +
Preference number: 5 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQDEDNC*APAPTS
Trigger: ACTGGTGGGTGCTGGTGCCAAACAATTGTCCTCATC...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGATGGCATTGCCCTCTTaGAAGTCCTGCAGAGCTTTC +
Preference number: 5 (lower is better)
Translates to: CSWSFSDCSFGPEAIQDEMALPS*KSCRAF
Trigger: GAAAGCTCTGCAGGACTTCAAAGAGGGCAATGCCAT...CTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS GCA 90 bp GTTAACAGTGAGGTTCCGCTCCTGGATGATCTCCTGCAGGGCATCTaGATACTTCTTAACCCCGAAAATGGCTCCAAGAGAAGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: VNSEVPLLDDLLQGI*ILLNPENGSKRSVE
Trigger: TTCAACACTTCTCTTGGAGCCATTTTCGGGGTTAAGAAGTATGCAGATGCCCTGCAGGAGATCATCCAGGAGCGGAACCTCACTGTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGAAGGTGAAGATGGCATaGCCCTCTTTGAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: KPIMSSPHGCCSKVLKREKVKMA*PSLKSC
Trigger: GCAGGACTTCAAAGAGGGCAATGCCATCTTCACCTT...CTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCTCAAATACAGCCTCTaGTTTATCGGCTCGGACTTC +
Preference number: 5 (lower is better)
Translates to: CSWSFSDCSFGPEAIQDELKYSL*FIGSDF
Trigger: GAAGTCCGAGCCGATAAACAAGAGGCTGTATTTGAG...CTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp ACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGTTTGACGTAGGAAGGTaGGTGCAGTCCCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: TLYKDRFQVLRAALGHSVFDVGR*VQSPIP
Trigger: TGGGATTGGGGACTGCACCAACCTTCCTACGTCAAA...CACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp ACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGTCAGTGACTGCAGTTTaGGCCCAGAAGCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: TLYKDRFQVLRAALGHSVSVTAV*AQKPSK
Trigger: CTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGA...CACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATATATTCTCTGAGTCCTaGCCTTCTGTGTCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: CCSWSFSDCSFGPEAIQDIFSES*PSVSSK
Trigger: CTTGCTGGACACAGAAGGCAAGGACTCAGAGAATAT...ATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568606.5
CDS-3UTR CAA 90 bp TTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGTCAGTCACTCTAGCTTaGATCCATTCTACACCAGAT +
Preference number: 5 (lower is better)
Translates to: FQVLRAALGHSVTAVLAQSVTLA*IHSTPD
Trigger: ATCTGGTGTAGAATGGATCAAAGCTAGAGTGACTGA...CTGGGCCAAAACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TCTTGGTCATTCAGTGACTGCAGTTTTGGCCCAGAAGCCATCCAAGATGAGCAATGGGTACCTCCTGTGTaGCAGAGTTTCTTTATCCAC +
Preference number: 5 (lower is better)
Translates to: SWSFSDCSFGPEAIQDEQWVPPV*QSFFIH
Trigger: GTGGATAAAGAAACTCTGCAACACAGGAGGTACCCA...TTGCTCATCTTGGATGGCTTCTGGGCCAAAACTGCAGTCACTGAATGACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGGTACTGAAAAGGGAGCAATCCCAAACACATTaGGGTACCTCCTGTGTTGCA +
Preference number: 5 (lower is better)
Translates to: KPIMSSPHGCCSKVLKREQSQTH*GTSCVA
Trigger: TGCAACACAGGAGGTACCCAAATGTGTTTGGGATTG...CTCCCTTTTCAGTACCTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTAAGGCGCTCTTTGCTTaGATCAAAGGGGAAGGTTTC +
Preference number: 5 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVKALFA*IKGEGF
Trigger: GAAACCTTCCCCTTTGATCAAAGCAAAGAGCGCCTT...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGCCACCAGTGTCCAGATaGGCTGGTAGAAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRPPVSR*AGRNVS
Trigger: AGAGACATTTCTACCAGCCAATCTGGACACTGGTGG...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTATGGCATTGCCCTCTTaGAAGTCCTGCAGAGCTTTC +
Preference number: 5 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGMALPS*KSCRAF
Trigger: GAAAGCTCTGCAGGACTTCAAAGAGGGCAATGCCAT...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGAAGGTGAAGATGGCATaGCCCTCTTTGAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SPLPIKELFTRIGSKSFVKVKMA*PSLKSC
Trigger: GCAGGACTTCAAAGAGGGCAATGCCATCTTCACCTT...CACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTGCAGTTGTGTTGAAAATGATATaGGCCTTGGATCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: KDRFQVLRAALGHSVTAVVLKMI*ALDRFP
Trigger: AGGGAAGCGATCCAAGGCCAATATCATTTTCAACAC...AACTGCAGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp CTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTCAGTGACTTGGGTCTCTCCTGGTTaGTCCAGGTTCTCAAATACA +
Preference number: 5 (lower is better)
Translates to: LYKDRFQVLRAALGHSVTWVSPG*SRFSNT
Trigger: TGTATTTGAGAACCTGGACAAACCAGGAGAGACCCA...AGTCACTGAATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp ATTTCATTTTATTATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTGCCACAGGACTGGTCTaGAGGACATCTGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: ISFYYSQRIKPIMSSPHGATGLV*RTSGGL
Trigger: GAGCCCACCAGATGTCCTCAAGACCAGTCCTGTGGC...ACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATAATAAAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TCCCCTTTGGGTGGAGATGTGCTACAAATCCCTTTCCTCATCCAGGAACCAGGCAGCCATCATACTTCTTaGTTGGTGTTTGATTCTTCA +
Preference number: 5 (lower is better)
Translates to: SPLGGDVLQIPFLIQEPGSHHTS*LVFDSS
Trigger: TGAAGAATCAAACACCAACAAAGAAGTATGATGGCT...GCCTGGTTCCTGGATGAGGAAAGGGATTTGTAGCACATCTCCACCCAAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR CAA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATAAGGCGCTCTTTGCTTaGATCAAAGGGGAAGGTTTC +
Preference number: 5 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHKALFA*IKGEGF
Trigger: GAAACCTTCCCCTTTGATCAAAGCAAAGAGCGCCTT...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp ATCCCCTTTGGGTGGAGATGTGCTACAAATCCCTTTCCTCATCCAGGAACCAGGTGGAAGACAGAACACTaGGTCACTGCTAATAATGAA +
Preference number: 5 (lower is better)
Translates to: IPFGWRCATNPFPHPGTRWKTEH*VTANNE
Trigger: TTCATTATTAGCAGTGACCAAGTGTTCTGTCTTCCA...CCTGGTTCCTGGATGAGGAAAGGGATTTGTAGCACATCTCCACCCAAAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS CCA 90 bp GTAGGAGATCTTCTCGTCGTCATCTGTGTGAATGCAGTTCTTGTCTaGGTTCAACTCAGTCACTCTAGCTTTGATCCATTCTACACCAGA +
Preference number: 5 (lower is better)
Translates to: VGDLLVVICVNAVLV*VQLSHSSFDPFYTR
Trigger: TCTGGTGTAGAATGGATCAAAGCTAGAGTGACTGAGTTGAACCCAGACAAGAACTGCATTCACACAGATGACGACGAGAAGATCTCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS-3UTR CAA 90 bp CAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATGTGTTGAAAATGATATaGGCCTTGGATCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QGTLYKDRFQVLRAALGHVLKMI*ALDRFP
Trigger: AGGGAAGCGATCCAAGGCCAATATCATTTTCAACAC...ATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTGCTGTTCAAAGCTCAAATACAGCCTCTaGTTTATCGGCTCGGACTTC +
Preference number: 5 (lower is better)
Translates to: YSQRIKPIMSSPHGCCSKLKYSL*FIGSDF
Trigger: GAAGTCCGAGCCGATAAACAAGAGGCTGTATTTGAG...CTTTGAACAGCAACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTGGGTCTCTCCTGGTTaGTCCAGGTTCTCAAATACA +
Preference number: 5 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGWVSPG*SRFSNT
Trigger: TGTATTTGAGAACCTGGACAAACCAGGAGAGACCCA...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGTGGGTACCTCCTGTGTaGCAGAGTTTCTTTATCCAC +
Preference number: 5 (lower is better)
Translates to: SPLPIKELFTRIGSKSFVWVPPV*QSFFIH
Trigger: GTGGATAAAGAAACTCTGCAACACAGGAGGTACCCA...CACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp ATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACACTTGGTGGGTACCTCCTGTGTaGCAGAGTTTCTTTATCCAC +
Preference number: 5 (lower is better)
Translates to: IIYPAAKEGLEHGRQNTWWVPPV*QSFFIH
Trigger: GTGGATAAAGAAACTCTGCAACACAGGAGGTACCCA...CCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR CAA 90 bp ATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACACTTGGAAGGCGCTCTTTGCTTaGATCAAAGGGGAAGGTTTC +
Preference number: 5 (lower is better)
Translates to: IIYPAAKEGLEHGRQNTWKALFA*IKGEGF
Trigger: GAAACCTTCCCCTTTGATCAAAGCAAAGAGCGCCTT...CCAAGTGTTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR CAA 90 bp AAGGAACTCTTTACAAGGATAGGTTCCAAGTCCTTCGTGCTGCTCTTGGTCATTAAAATGATATTGGCCTaGGATCGCTTCCCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: KELFTRIGSKSFVLLLVIKMILA*DRFPVF
Trigger: GAAGACAGGGAAGCGATCCAAGGCCAATATCATTTT...AATGACCAAGAGCAGCACGAAGGACTTGGAACCTATCCTTGTAAAGAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp TACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAATTTGACGTAGGAAGGTaGGTGCAGTCCCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: YYYYLSSSKRGPRAWKTEFDVGR*VQSPIP
Trigger: TGGGATTGGGGACTGCACCAACCTTCCTACGTCAAA...TTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS TCA 90 bp TTAGCATCATATTCCAATACAGGAAAGGCATCAGGTCAGCTTTCATaGGATACATGGAAAGGCGCTCTTTGCTTTGATCAAAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LASYSNTGKASGQLS*DTWKGALCFDQRGR
Trigger: CCTTCCCCTTTGATCAAAGCAAAGAGCGCCTTTCCATGTATCTCATGAAAGCTGACCTGATGCCTTTCCTGTATTGGAATATGATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000565997.1
ENST00000568606.5
CDS-3UTR CAA 90 bp TACTATTATTATTTATCCAGCAGCAAAAGAGGGCCTAGAGCATGGAAGACAGAACAATCCCAAACACATTaGGGTACCTCCTGTGTTGCA +
Preference number: 5 (lower is better)
Translates to: YYYYLSSSKRGPRAWKTEQSQTH*GTSCVA
Trigger: TGCAACACAGGAGGTACCCAAATGTGTTTGGGATTG...TTCTGTCTTCCATGCTCTAGGCCCTCTTTTGCTGCTGGATAAATAATAATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565997.1
CDS-3UTR CAA 90 bp AAAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGAGCCATCATACTTCTTaGTTGGTGTTTGATTCTTCA +
Preference number: 5 (lower is better)
Translates to: KGRHLVTITHQGTLYKDRSHHTS*LVFDSS
Trigger: TGAAGAATCAAACACCAACAAAGAAGTATGATGGCT...CCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp AAGGGAGGCATTTGGTCACCATTACCCATCAAGGAACTCTTTACAAGGATAGGTAGCCATCATACTTCTTaGTTGGTGTTTGATTCTTCA +
Preference number: 5 (lower is better)
Translates to: KGGIWSPLPIKELFTRIGSHHTS*LVFDSS
Trigger: TGAAGAATCAAACACCAACAAAGAAGTATGATGGCT...ACCTATCCTTGTAAAGAGTTCCTTGATGGGTAATGGTGACCAAATGCCTCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS-3UTR CAA 90 bp ATTTCATTTTATTATTCCCAAAGAATCAAGCCCATCATGAGTAGCCCACATGGTTCAGTCACTCTAGCTTaGATCCATTCTACACCAGAT +
Preference number: 5 (lower is better)
Translates to: ISFYYSQRIKPIMSSPHGSVTLA*IHSTPD
Trigger: ATCTGGTGTAGAATGGATCAAAGCTAGAGTGACTGA...ACCATGTGGGCTACTCATGATGGGCTTGATTCTTTGGGAATAATAAAATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS CCA 72 bp GGAACAAGCGTCCATCCGGCCTGGGGTGCTGCCGGCTaGACAGACTCGCCCCTTGCGCGCCCTGAAGGGCGG +
Preference number: 6 (lower is better)
Translates to: GTSVHPAWGAAG*TDSPLARPEGR
Trigger: CCGCCCTTCAGGGCGCGCAAGGGGCGAGTCTGTCCAGCCGGCAGCACCCCAGGCCGGATGGACGCTTGTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561735.5
CDS CCA 72 bp CGGGGCACAGAACCAGGAACAAGCGTCCATCCGGCCTaGGGTGCTGCCGGCTGGACAGACTCGCCCCTTGCG +
Preference number: 6 (lower is better)
Translates to: RGTEPGTSVHPA*GAAGWTDSPLA
Trigger: CGCAAGGGGCGAGTCTGTCCAGCCGGCAGCACCCCAGGCCGGATGGACGCTTGTTCCTGGTTCTGTGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561735.5
CDS CCA 72 bp GCACCAGCACCTCATAATGGTTCCTGGCCGCATGGCTaGCCCCGGTGTGCAGCTGAAGGGGGCCGACCTGCT +
Preference number: 6 (lower is better)
Translates to: APAPHNGSWPHG*PRCAAEGGRPA
Trigger: AGCAGGTCGGCCCCCTTCAGCTGCACACCGGGGCCAGCCATGCGGCCAGGAACCATTATGAGGTGCTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000565227.1
ENST00000568606.5
CDS CCA 72 bp CAGGCCGGGCGTGAGCGGAGCCTTCGGTCACTGCGTTaGCGCAGCAAAAACCTTCGCTCCCTTCTGGGTCTC +
Preference number: 6 (lower is better)
Translates to: QAGRERSLRSLR*RSKNLRSLLGL
Trigger: GAGACCCAGAAGGGAGCGAAGGTTTTTGCTGCGCCAACGCAGTGACCGAAGGCTCCGCTCACGCCCGGCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260324.12
CDS GCA 72 bp AGGATCAGGCCGGGCGTGAGCGGAGCCTTCGGTCACTaGGTTGGCGCAGCAAAAACCTTCGCTCCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: RIRPGVSGAFGH*VGAAKTFAPFW
Trigger: CCAGAAGGGAGCGAAGGTTTTTGCTGCGCCAACGCAGTGACCGAAGGCTCCGCTCACGCCCGGCCTGATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260324.12
CDS CCA 72 bp TGTGCCCGCTGTCTAGGCATACAAGTACCATGTGGCTaGGGAGGCCTCAGAATCATGGAGGGAGGCGAAAGG +
Preference number: 6 (lower is better)
Translates to: CARCLGIQVPCG*GGLRIMEGGER
Trigger: CCTTTCGCCTCCCTCCATGATTCTGAGGCCTCCCCAGCCACATGGTACTTGTATGCCTAGACAGCGGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568606.5
CDS CCA 72 bp CACTTGCCGTGGGACGACCAGATGAGGACAATTGTTTaGCACCAGCACCCACCAGTGTCCAGATTGGCTGGT +
Preference number: 6 (lower is better)
Translates to: HLPWDDQMRTIV*HQHPPVSRLAG
Trigger: ACCAGCCAATCTGGACACTGGTGGGTGCTGGTGCCAAACAATTGTCCTCATCTGGTCGTCCCACGGCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS CAA 72 bp ACACTTGCCGTGGGACGACCAGATGAGGACAATTGTTaGGCACCAGCACCCACCAGTGTCCAGATTGGCTGG +
Preference number: 6 (lower is better)
Translates to: TLAVGRPDEDNC*APAPTSVQIGW
Trigger: CCAGCCAATCTGGACACTGGTGGGTGCTGGTGCCAAACAATTGTCCTCATCTGGTCGTCCCACGGCAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS CAA 90 bp CCTGACTGGGCAGCTACTGCAGCAGCGGTCTTTGACGTAGGAAGGTaGGTGCAGTCCCCAATCCCAAACACATTTGGGTACCTCCTGTGT +
Preference number: 6 (lower is better)
Translates to: PDWAATAAAVFDVGR*VQSPIPNTFGYLLC
Trigger: ACACAGGAGGTACCCAAATGTGTTTGGGATTGGGGACTGCACCAACCTTCCTACGTCAAAGACCGCTGCTGCAGTAGCTGCCCAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000565997.1
ENST00000568606.5
CDS GCA 72 bp ATGTCTCTCACTGGGCTCAACAATGGCCACATTCTCTaGACCCACTTTCCTCTTCATGCGGGCAGCCATGGT +
Preference number: 6 (lower is better)
Translates to: MSLTGLNNGHIL*THFPLHAGSHG
Trigger: ACCATGGCTGCCCGCATGAAGAGGAAAGTGGGTGCAGAGAATGTGGCCATTGTTGAGCCCAGTGAGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS CAA 72 bp GCAGCTACTGCAGCAGCGGTCTTTGACGTAGGAAGGTaGGTGCAGTCCCCAATCCCAAACACATTTGGGTAC +
Preference number: 6 (lower is better)
Translates to: AATAAAVFDVGR*VQSPIPNTFGY
Trigger: GTACCCAAATGTGTTTGGGATTGGGGACTGCACCAACCTTCCTACGTCAAAGACCGCTGCTGCAGTAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000565997.1
ENST00000568606.5
CDS GCA 72 bp GAGGTTCCGCTCCTGGATGATCTCCTGCAGGGCATCTaGATACTTCTTAACCCCGAAAATGGCTCCAAGAGA +
Preference number: 6 (lower is better)
Translates to: EVPLLDDLLQGI*ILLNPENGSKR
Trigger: TCTCTTGGAGCCATTTTCGGGGTTAAGAAGTATGCAGATGCCCTGCAGGAGATCATCCAGGAGCGGAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS CCA 72 bp AGCAGCATCAGCCACAGGACTGGTCTTGAGGACATCTaGTGGGCTCATTGGAGGTGTGACATGAAGCATTTC +
Preference number: 6 (lower is better)
Translates to: SSISHRTGLEDI*WAHWRCDMKHF
Trigger: GAAATGCTTCATGTCACACCTCCAATGAGCCCACCAGATGTCCTCAAGACCAGTCCTGTGGCTGATGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS CAA 90 bp ATCCGGGAGAAGGAAAATAAATCCAAATCAGGGCTCTGGGAAGATTaGCAGACACGTGGGCAGGAAGGGCTGGCAACAGGAATGGGTGGA +
Preference number: 6 (lower is better)
Translates to: IREKENKSKSGLWED*QTRGQEGLATGMGG
Trigger: TCCACCCATTCCTGTTGCCAGCCCTTCCTGCCCACGTGTCTGCAAATCTTCCCAGAGCCCTGATTTGGATTTATTTTCCTTCTCCCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563296.1
ENST00000565227.1
CDS CAA 90 bp GTTGGTGCAGTCCCCAATCCCAAACACATTTGGGTACCTCCTGTGTaGCAGAGTTTCTTTATCCACATCCACCCAACCAGCAGCATCAGC +
Preference number: 6 (lower is better)
Translates to: VGAVPNPKHIWVPPV*QSFFIHIHPTSSIS
Trigger: GCTGATGCTGCTGGTTGGGTGGATGTGGATAAAGAAACTCTGCAACACAGGAGGTACCCAAATGTGTTTGGGATTGGGGACTGCACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000565997.1
ENST00000568606.5
CDS CAA 90 bp AGGTCATGCAGTCATTCTTTCATCTGGTGGATATTCTCTGAGTCCTaGCCTTCTGTGTCCAGCAAGCCCTGTGCCCGCTGTCTAGGCATA +
Preference number: 6 (lower is better)
Translates to: RSCSHSFIWWIFSES*PSVSSKPCARCLGI
Trigger: TATGCCTAGACAGCGGGCACAGGGCTTGCTGGACACAGAAGGCAAGGACTCAGAGAATATCCACCAGATGAAAGAATGACTGCATGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565227.1
ENST00000568606.5
CDS CCA 72 bp GTACATGATCTTCTGAGGGGCTCCAGCACACTTCACTaGAGTATTTGGGAAGGTGAAGATGGCATTGCCCTC +
Preference number: 6 (lower is better)
Translates to: VHDLLRGSSTLH*SIWEGEDGIAL
Trigger: GAGGGCAATGCCATCTTCACCTTCCCAAATACTCCAGTGAAGTGTGCTGGAGCCCCTCAGAAGATCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000566934.1
ENST00000568606.5
CDS CAA 72 bp AGTGGCACCATCTTCAGGCAGGATCAGGCTGTATCCTaGGTGAGTCAGGACCCTTTGTTCTGCGATCTCTTT +
Preference number: 6 (lower is better)
Translates to: SGTIFRQDQAVS*VSQDPLFCDLF
Trigger: AAAGAGATCGCAGAACAAAGGGTCCTGACTCACCAAGGATACAGCCTGATCCTGCCTGAAGATGGTGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561493.5
CDS TCA 72 bp GCACCATCTTCAGGCAGGATCAGGCTGTATCCTTGGTaGGTCAGGACCCTTTGTTCTGCGATCTCTTTTAGA +
Preference number: 6 (lower is better)
Translates to: APSSGRIRLYPW*VRTLCSAISFR
Trigger: TCTAAAAGAGATCGCAGAACAAAGGGTCCTGACTCACCAAGGATACAGCCTGATCCTGCCTGAAGATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561493.5
CDS CCA 72 bp CAATTGTTTGGCACCAGCACCCACCAGTGTCCAGATTaGCTGGTAGAAATGTCTCTCACTGGGCTCAACAAT +
Preference number: 6 (lower is better)
Translates to: QLFGTSTHQCPD*LVEMSLTGLNN
Trigger: ATTGTTGAGCCCAGTGAGAGACATTTCTACCAGCCAATCTGGACACTGGTGGGTGCTGGTGCCAAACAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS CCA 72 bp AGCATCAGCCACAGGACTGGTCTTGAGGACATCTGGTaGGCTCATTGGAGGTGTGACATGAAGCATTTCATA +
Preference number: 6 (lower is better)
Translates to: SISHRTGLEDIW*AHWRCDMKHFI
Trigger: TATGAAATGCTTCATGTCACACCTCCAATGAGCCCACCAGATGTCCTCAAGACCAGTCCTGTGGCTGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS GCA 72 bp TCCCCAATCCCAAACACATTTGGGTACCTCCTGTGTTaGAGAGTTTCTTTATCCACATCCACCCAACCAGCA +
Preference number: 6 (lower is better)
Translates to: SPIPNTFGYLLC*RVSLSTSTQPA
Trigger: TGCTGGTTGGGTGGATGTGGATAAAGAAACTCTGCAACACAGGAGGTACCCAAATGTGTTTGGGATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000565997.1
ENST00000568606.5
CDS CCA 72 bp TCAGGCAGGATCAGGTCATGCAGTCATTCTTTCATCTaGTGGATATTCTCTGAGTCCTTGCCTTCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: SGRIRSCSHSFI*WIFSESLPSVS
Trigger: GGACACAGAAGGCAAGGACTCAGAGAATATCCACCAGATGAAAGAATGACTGCATGACCTGATCCTGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565227.1
ENST00000568606.5
CDS TCA 72 bp GCTTTCATGAGATACATGGAAAGGCGCTCTTTGCTTTaGTCAAAGGGGAAGGTTTCTAGCGGCTCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: AFMRYMERRSLL*SKGKVSSGSAL
Trigger: CAAAGCAGAGCCGCTAGAAACCTTCCCCTTTGATCAAAGCAAAGAGCGCCTTTCCATGTATCTCATGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000565997.1
ENST00000568606.5
CDS GCA 72 bp GGGAAGGTGAAGATGGCATTGCCCTCTTTGAAGTCCTaGAGAGCTTTCCATGTCTTCTCTACAGTCTTAACT +
Preference number: 6 (lower is better)
Translates to: GKVKMALPSLKS*RAFHVFSTVLT
Trigger: AGTTAAGACTGTAGAGAAGACATGGAAAGCTCTGCAGGACTTCAAAGAGGGCAATGCCATCTTCACCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000566934.1
ENST00000568606.5
CDS GCA 72 bp CAGTGGCACCATCTTCAGGCAGGATCAGGTTACTCATaGAGTCATTCTTTCATCTGGTGGATATTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: QWHHLQAGSGYS*SHSFIWWIFSE
Trigger: CTCAGAGAATATCCACCAGATGAAAGAATGACTGCATGAGTAACCTGATCCTGCCTGAAGATGGTGCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563296.1
CDS CCA 72 bp GGATCAGGTTACTCATGCAGTCATTCTTTCATCTGGTaGATATTCTCTGAGTCCTTGCCTTCTGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: GSGYSCSHSFIW*IFSESLPSVSS
Trigger: GCTGGACACAGAAGGCAAGGACTCAGAGAATATCCACCAGATGAAAGAATGACTGCATGAGTAACCTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563296.1
CDS CCA 72 bp GCAGGATCAGGTTACTCATGCAGTCATTCTTTCATCTaGTGGATATTCTCTGAGTCCTTGCCTTCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: AGSGYSCSHSFI*WIFSESLPSVS
Trigger: GGACACAGAAGGCAAGGACTCAGAGAATATCCACCAGATGAAAGAATGACTGCATGAGTAACCTGATCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563296.1
CDS CAA 72 bp GGAGTATTTGGGAAGGTGAAGATGGCATTGCCCTCTTaGAAGTCCTGCAGAGCTTTCCATGTCTTCTCTACA +
Preference number: 6 (lower is better)
Translates to: GVFGKVKMALPS*KSCRAFHVFST
Trigger: TGTAGAGAAGACATGGAAAGCTCTGCAGGACTTCAAAGAGGGCAATGCCATCTTCACCTTCCCAAATACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000566934.1
ENST00000568606.5
CDS CAA 90 bp CACTTCACTGGAGTATTTGGGAAGGTGAAGATGGCATTGCCCTCTTaGAAGTCCTGCAGAGCTTTCCATGTCTTCTCTACAGTCTTAACT +
Preference number: 6 (lower is better)
Translates to: HFTGVFGKVKMALPS*KSCRAFHVFSTVLT
Trigger: AGTTAAGACTGTAGAGAAGACATGGAAAGCTCTGCAGGACTTCAAAGAGGGCAATGCCATCTTCACCTTCCCAAATACTCCAGTGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000566934.1
ENST00000568606.5
CDS TCA 72 bp TTGAGGACATCTGGTGGGCTCATTGGAGGTGTGACATaGAGCATTTCATATGAAATCACTTGGGTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LRTSGGLIGGVT*SISYEITWVSP
Trigger: AGGAGAGACCCAAGTGATTTCATATGAAATGCTTCATGTCACACCTCCAATGAGCCCACCAGATGTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS TCA 72 bp AAGAATCACACGGTTGTAGCCGGTCACCAGTGGACATaGTGTGTAGCCATCATACTTCTTTGTTGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: KNHTVVAGHQWT*CVAIILLCWCL
Trigger: CAAACACCAACAAAGAAGTATGATGGCTACACATCATGTCCACTGGTGACCGGCTACAACCGTGTGATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000565997.1
ENST00000568606.5
CDS CCA 72 bp CTTCTCGTCGTCATCTGTGTGAATGCAGTTCTTGTCTaGGTTCAACTCAGTCACTCTAGCTTTGATCCATTC +
Preference number: 6 (lower is better)
Translates to: LLVVICVNAVLV*VQLSHSSFDPF
Trigger: GAATGGATCAAAGCTAGAGTGACTGAGTTGAACCCAGACAAGAACTGCATTCACACAGATGACGACGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS CAA 72 bp CAGTTCTTGTCTGGGTTCAACTCAGTCACTCTAGCTTaGATCCATTCTACACCAGATGGAATCACACTTGCC +
Preference number: 6 (lower is better)
Translates to: QFLSGFNSVTLA*IHSTPDGITLA
Trigger: GGCAAGTGTGATTCCATCTGGTGTAGAATGGATCAAAGCTAGAGTGACTGAGTTGAACCCAGACAAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260324.12
ENST00000561493.5
ENST00000561735.5
ENST00000566934.1
ENST00000568606.5
CDS CAA 90 bp CACTTGGGTCTCTCCTGGTTTGTCCAGGTTCTCAAATACAGCCTCTaGTTTATCGGCTCGGACTTCAATGAGGTTTTTCTTGTAGTTAAC +
Preference number: 6 (lower is better)
Translates to: HLGLSWFVQVLKYSL*FIGSDFNEVFLVVN
Trigger: GTTAACTACAAGAAAAACCTCATTGAAGTCCGAGCCGATAAACAAGAGGCTGTATTTGAGAACCTGGACAAACCAGGAGAGACCCAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS CAA 72 bp CTCTCCTGGTTTGTCCAGGTTCTCAAATACAGCCTCTaGTTTATCGGCTCGGACTTCAATGAGGTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: LSWFVQVLKYSL*FIGSDFNEVFL
Trigger: AAGAAAAACCTCATTGAAGTCCGAGCCGATAAACAAGAGGCTGTATTTGAGAACCTGGACAAACCAGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260324.12
ENST00000568606.5
CDS TCA 72 bp CTGCAGAGCTTTCCATGTCTTCTCTACAGTCTTAACTaGATAATTCGACCCTATTTTGGGATGAGCGAAACC +
Preference number: 6 (lower is better)
Translates to: LQSFPCLLYSLN*IIRPYFGMSET
Trigger: GGTTTCGCTCATCCCAAAATAGGGTCGAATTATTCAGTTAAGACTGTAGAGAAGACATGGAAAGCTCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260324.12
ENST00000566934.1
ENST00000568606.5
CDS TCA 72 bp AGACTTGATTCCTACCCATGTGAAGTTTGCGAGGAATaGAAGTGCACTTGGGGATATGGGAAACTGAAAGAA +
Preference number: 6 (lower is better)
Translates to: RLDSYPCEVCEE*KCTWGYGKLKE
Trigger: TTCTTTCAGTTTCCCATATCCCCAAGTGCACTTTCATTCCTCGCAAACTTCACATGGGTAGGAATCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563296.1