RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPX (Homo sapiens)

Ensembl gene IDs: ENSG00000134548

Ensembl transcript IDs: ENST00000256969.7, ENST00000535033.5, ENST00000535139.5, ENST00000537527.1, ENST00000543800.5, ENST00000544637.5, ENST00000546199.1, ENST00000649016.1

Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGGAGCTCTGAGCTCTGGATCTTTGGCAAACCTTCTACCTCAATaGCTGTCTCCTCTCAGCAACCACACTGAAGTGTTCCTATCACAG +
Preference number: 1 (lower is better)
Translates to: KGALSSGSLANLLPQ*LSPLSNHTEVFLSQ
Trigger: CTGTGATAGGAACACTTCAGTGTGGTTGCTGAGAGGAGACAGTCATTGAGGTAGAAGGTTTGCCAAAGATCCAGAGCTCAGAGCTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR CCA 90 bp GAATGCAAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTaGATCTTTGGCAAACCTTCTACCTCAATGACTGTCTCCTCTCAG +
Preference number: 1 (lower is better)
Translates to: ECKVIPKEHKGSSEL*IFGKPSTSMTVSSQ
Trigger: CTGAGAGGAGACAGTCATTGAGGTAGAAGGTTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTTGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR GCA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAATCCTATTTCCCATCCTaGCATGTTTCTCACCTTCCT +
Preference number: 2 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKSYFPS*HVSHLP
Trigger: AGGAAGGTGAGAAACATGGCAGGATGGGAAATAGGA...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR TCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTCTCAGCAACCACACTaGAGTGTTCCTATCACAGAG +
Preference number: 2 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYSQQPH*SVPITE
Trigger: CTCTGTGATAGGAACACTTCAGTGTGGTTGCTGAGA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR TCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATAGCACAAAGGGAGCTCTaGGCTCTGGATCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: VMENELPLTKLACSLLPIAQREL*ALDLWQ
Trigger: TTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGC...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR TCA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCTCTTCTGGTGATTTCTaGAGGGACGCCAGTAAGATG +
Preference number: 2 (lower is better)
Translates to: SSIFSPVKQTVFQESGLISSGDF*RDASKM
Trigger: CATCTTACTGGCGTCCCTTCAGAAATCACCAGAAGA...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546199.1
3UTR-3UTR TCA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCTTCTTCATCTTCTGGTaGTTTCTGAAGGGACGCCAG +
Preference number: 2 (lower is better)
Translates to: SSIFSPVKQTVFQESGLIFFIFW*FLKGRQ
Trigger: CTGGCGTCCCTTCAGAAATCACCAGAAGATGAAGAA...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546199.1
3UTR-3UTR GCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTCCTATTTCCCATCCTaGCATGTTTCTCACCTTCCT +
Preference number: 2 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYSYFPS*HVSHLP
Trigger: AGGAAGGTGAGAAACATGGCAGGATGGGAAATAGGA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR CCA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAATTCCTTCCACATTCTTaGGGATGGGATAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKFLPHS*GWDKRK
Trigger: TTTCCTTTTATCCCATCCCCAAGAATGTGGAAGGAA...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR TCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATCAGGACCTGAAGCAATaGAAGAAGATGATGTTCTCA +
Preference number: 2 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYQDLKQ*KKMMFS
Trigger: TGAGAACATCATCTTCTTTCATTGCTTCAGGTCCTG...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR TCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATAAGGAGAATTTCTGCTaGGTGAAAACAAAATGCAAG +
Preference number: 2 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYKENFC*VKTKCK
Trigger: CTTGCATTTTGTTTTCACTCAGCAGAAATTCTCCTT...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR GCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATAGAGTGTGTCTCCATCTaGTTATTTCCCAGTAACTTT +
Preference number: 2 (lower is better)
Translates to: VMENELPLTKLACSLLPIECVSI*LFPSNF
Trigger: AAAGTTACTGGGAAATAAGCAGATGGAGACACACTC...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR TCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTCAGGACCTGAAGCAATaGAAGAAGATGATGTTCTCA +
Preference number: 2 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPQDLKQ*KKMMFS
Trigger: TGAGAACATCATCTTCTTTCATTGCTTCAGGTCCTG...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR CCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTTTCCTTCCACATTCTTaGGGATGGGATAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPFLPHS*GWDKRK
Trigger: TTTCCTTTTATCCCATCCCCAAGAATGTGGAAGGAA...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR TCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTAAGGAGAATTTCTGCTaGGTGAAAACAAAATGCAAG +
Preference number: 2 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPKENFC*VKTKCK
Trigger: CTTGCATTTTGTTTTCACTCAGCAGAAATTCTCCTT...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR CCA 72 bp GTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTaGATCTTTGGCAAACCTTCTACCTCAATGACTGTC +
Preference number: 3 (lower is better)
Translates to: VIPKEHKGSSEL*IFGKPSTSMTV
Trigger: GACAGTCATTGAGGTAGAAGGTTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR TCA 72 bp ATGCAAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTaGGCTCTGGATCTTTGGCAAACCTTCTACCTCAAT +
Preference number: 3 (lower is better)
Translates to: MQGNSQRAQREL*ALDLWQTFYLN
Trigger: ATTGAGGTAGAAGGTTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR GCA 72 bp CACAGGAGTATGTGTGTATGCGTGTGTGGGTATATGTaGATGTGTGTGTATTCAGATGGTACTGAACTCAAG +
Preference number: 3 (lower is better)
Translates to: HRSMCVCVCGYM*MCVYSDGTELK
Trigger: CTTGAGTTCAGTACCATCTGAATACACACACATGCACATATACCCACACACGCATACACACATACTCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR-3UTR CAA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATACTGAGCTCTGGATCTTaGGCAAACCTTCTACCTCAA +
Preference number: 3 (lower is better)
Translates to: VMENELPLTKLACSLLPILSSGS*ANLLPQ
Trigger: TTGAGGTAGAAGGTTTGCCAAAGATCCAGAGCTCAG...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR TCA 72 bp TACTTGAATCTGTTGAGTCTGTTTGGTCATGGAAAATaGGTTACCTCTAACAAAACTGGCTTGTTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: YLNLLSLFGHGK*VTSNKTGLFPS
Trigger: AGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGACCAAACAGACTCAACAGATTCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR GCA 72 bp ATACATTATTATGTTTGCCACAGGAGTATGTGTGTATaGGTGTGTGGGTATATGTGCATGTGTGTGTATTCA +
Preference number: 3 (lower is better)
Translates to: IHYYVCHRSMCV*VCGYMCMCVYS
Trigger: TGAATACACACACATGCACATATACCCACACACGCATACACACATACTCCTGTGGCAAACATAATAATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
3UTR TCA 72 bp TATTTCCCAGTAACTTTTAGATCCATGTTTCTAAACTaGATGCAAGGTAATTCCCAAAGAGCACAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: YFPVTFRSMFLN*MQGNSQRAQRE
Trigger: CTCCCTTTGTGCTCTTTGGGAATTACCTTGCATTCAGTTTAGAAACATGGATCTAAAAGTTACTGGGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAAGGCTCTGGTCGGAGATaGAGCGGCGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKGSGRR*SGDPVP
Trigger: GGGCACAGGGTCGCCGCTTCATCTCCGACCAGAGCC...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATGGCTCTGGTCGGAGATaGAGCGGCGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYGSGRR*SGDPVP
Trigger: GGGCACAGGGTCGCCGCTTCATCTCCGACCAGAGCC...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCGGCTCTGGTCGGAGATaGAGCGGCGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSIFSPVKQTVFQESGLIGSGRR*SGDPVP
Trigger: GGGCACAGGGTCGCCGCTTCATCTCCGACCAGAGCC...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546199.1
CDS-3UTR CCA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCGGCTTCGTCCGGCAGTaGCCGGTCGGAGAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSIFSPVKQTVFQESGLIGFVRQ*PVGEVL
Trigger: AAGGACCTCTCCGACCGGCCACTGCCGGACGAAGCC...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546199.1
CDS-3UTR TCA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAAGCACAAAGGGAGCTCTaGGCTCTGGATCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKAQREL*ALDLWQ
Trigger: TTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGC...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR GCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATGAAGCGGCGACCCTGTaGCCCTTTCAGGTAGAGCAT +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYEAATL*PFQVEH
Trigger: ATGCTCTACCTGAAAGGGGCACAGGGTCGCCGCTTC...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR GCA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCGAAGCGGCGACCCTGTaGCCCTTTCAGGTAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SSIFSPVKQTVFQESGLIEAATL*PFQVEH
Trigger: ATGCTCTACCTGAAAGGGGCACAGGGTCGCCGCTTC...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546199.1
CDS-3UTR CCA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCTCCTTTCTCCGGCTCTaGTCGGAGATGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: SSIFSPVKQTVFQESGLISFLRL*SEMKRR
Trigger: TCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGA...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546199.1
CDS-3UTR CCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATAGGGCACCTCCCCATCTaGAGTAGAGTTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPIGHLPI*SRVWES
Trigger: GGACTCCCAAACTCTACTCCAGATGGGGAGGTGCCC...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS-3UTR CCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATATCCTTTCTCCGGCTCTaGTCGGAGATGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPISFLRL*SEMKRR
Trigger: TCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGA...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR GCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATAGCCAAGGTTGTTGCTaGCAGACTTCTGAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYSQGCC*QTSESL
Trigger: AAGGGACTCAGAAGTCTGGCAGCAACAACCTTGGCT...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS-3UTR GCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATAAGAGCCAAGGTTGTTaGTGCCAGACTTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYKSQGC*CQTSES
Trigger: GGACTCAGAAGTCTGGCAGCAACAACCTTGGCTCTT...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS-3UTR CCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTTCGTCTTTCCGGCAGTaGCCGGTCGGAGAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPSSFRQ*PVGEVL
Trigger: AAGGACCTCTCCGACCGGCCACTGCCGGAAAGACGA...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATATTGCTGCCAGACTTCTaGGTCCCTTCATGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPILLPDF*VPSCSA
Trigger: CGCAGAACATGAAGGGACTCAGAAGTCTGGCAGCAA...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS-3UTR TCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTTCTTCATCTTCTGGTaGTTTCTGAAGGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYFFIFW*FLKGRQ
Trigger: CTGGCGTCCCTTCAGAAATCACCAGAAGATGAAGAA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR GCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTGAAGCGGCGACCCTGTaGCCCTTTCAGGTAGAGCAT +
Preference number: 4 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPEAATL*PFQVEH
Trigger: ATGCTCTACCTGAAAGGGGCACAGGGTCGCCGCTTC...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTTCCTTTCTCCGGCTCTaGTCGGAGATGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPSFLRL*SEMKRR
Trigger: TCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGA...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAATTGATTACTCCTGGATaGGCTATAGAGAGTCATACT +
Preference number: 4 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKLITPG*AIESHT
Trigger: AGTATGACTCTCTATAGCTCATCCAGGAGTAATCAA...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CCA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCGGAATAGTTAGTAGTTaGGGATTTGGGCTTCGTCCG +
Preference number: 4 (lower is better)
Translates to: SSIFSPVKQTVFQESGLIGIVSS*GFGLRP
Trigger: CGGACGAAGCCCAAATCCCCAACTACTAACTATTCC...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546199.1
CDS-3UTR TCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATATCTTCTGGTGATTTCTaGAGGGACGCCAGTAAGATG +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPISSGDF*RDASKM
Trigger: CATCTTACTGGCGTCCCTTCAGAAATCACCAGAAGA...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAAAAGGAGAATTTCTGCTaGGTGAAAACAAAATGCAAG +
Preference number: 4 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKKENFC*VKTKCK
Trigger: CTTGCATTTTGTTTTCACTCAGCAGAAATTCTCCTT...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATATCTCAGCAACCACACTaGAGTGTTCCTATCACAGAG +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPISQQPH*SVPITE
Trigger: CTCTGTGATAGGAACACTTCAGTGTGGTTGCTGAGA...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTTCTGCGGAGCGCAGCTaGAGTTTCCCAGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPSAERS*SFPGKQ
Trigger: TTGTTTTCCTGGGAAACTCCAGCTGCGCTCCGCAGA...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS-3UTR TCA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCCAGGACCTGAAGCAATaGAAGAAGATGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SSIFSPVKQTVFQESGLIQDLKQ*KKMMFS
Trigger: TGAGAACATCATCTTCTTTCATTGCTTCAGGTCCTG...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546199.1
CDS-3UTR TCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTTGATTACTCCTGGATaGGCTATAGAGAGTCATACT +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYLITPG*AIESHT
Trigger: AGTATGACTCTCTATAGCTCATCCAGGAGTAATCAA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR GCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATGAGTGTGTCTCCATCTaGTTATTTCCCAGTAACTTT +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYECVSI*LFPSNF
Trigger: AAAGTTACTGGGAAATAAGCAGATGGAGACACACTC...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTGGGAGCTCTGAGCTCTaGATCTTTGGCAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPGSSEL*IFGKPS
Trigger: AGAAGGTTTGCCAAAGATCCAGAGCTCAGAGCTCCC...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTTTCTTCATCTTCTGGTaGTTTCTGAAGGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPFFIFW*FLKGRQ
Trigger: CTGGCGTCCCTTCAGAAATCACCAGAAGATGAAGAA...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATACAGGACCTGAAGCAATaGAAGAAGATGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPIQDLKQ*KKMMFS
Trigger: TGAGAACATCATCTTCTTTCATTGCTTCAGGTCCTG...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTCCATGTTTCTAAACTaGATGCAAGGTAATTCCCAA +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYSMFLN*MQGNSQ
Trigger: TTGGGAATTACCTTGCATTCAGTTTAGAAACATGGA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR GCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTCAGGCATATTACTGTaGACTTATGTTATCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYSGILL*TYVIRV
Trigger: CACTCTGATAACATAAGTGCACAGTAATATGCCTGA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATAGGAATAGTTAGTAGTTaGGGATTTGGGCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPIGIVSS*GFGLRL
Trigger: AAGACGAAGCCCAAATCCCCAACTACTAACTATTCC...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTCTGTTGAGTCTGTTTaGTCATGGAAAATGAGTTAC +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYSVESV*SWKMSY
Trigger: GTAACTCATTTTCCATGACCAAACAGACTCAACAGA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR GCA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATCAGTTAATAAAACATTaGAGCTCAGTCCTCTATTAC +
Preference number: 4 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYQLIKH*SSVLYY
Trigger: GTAATAGAGGACTGAGCTGCAATGTTTTATTAACTG...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535033.5
CDS-3UTR CCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATATTCCTTCCACATTCTTaGGGATGGGATAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPIFLPHS*GWDKRK
Trigger: TTTCCTTTTATCCCATCCCCAAGAATGTGGAAGGAA...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTGGAATAGTTAGTAGTTaGGGATTTGGGCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPGIVSS*GFGLRL
Trigger: AAGACGAAGCCCAAATCCCCAACTACTAACTATTCC...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CCA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATATCTGTTGAGTCTGTTTaGTCATGGAAAATGAGTTAC +
Preference number: 4 (lower is better)
Translates to: VMENELPLTKLACSLLPISVESV*SWKMSY
Trigger: GTAACTCATTTTCCATGACCAAACAGACTCAACAGA...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR TCA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTTCCATGTTTCTAAACTaGATGCAAGGTAATTCCCAA +
Preference number: 4 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPSMFLN*MQGNSQ
Trigger: TTGGGAATTACCTTGCATTCAGTTTAGAAACATGGA...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS CCA 90 bp GGCTTGGGGAGCCGCAGCGCCAGCCTGGGCCGCCCTTGCCACCATTaGCGCGGGGCTGGACGCGCGAGCTCCCAGCTCCGGCGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: GLGSRSASLGRPCHH*RGAGRASSQLRRSA
Trigger: TGCCGAGCGCCGGAGCTGGGAGCTCGCGCGTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTGGCGCTGCGGCTCCCCAAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS CCA 90 bp CCGCAGCGCCAGCCTGGGCCGCCCTTGCCACCATTGGCGCGGGGCTaGACGCGCGAGCTCCCAGCTCCGGCGCTCGGCATCCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PQRQPGPPLPPLARG*TRELPAPALGIQLL
Trigger: CAGCAGCTGGATGCCGAGCGCCGGAGCTGGGAGCTCGCGCGTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTGGCGCTGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS CCA 90 bp GAACAGCCGCAAGCCAATAAGGCTTGGGGAGCCGCAGCGCCAGCCTaGGCCGCCCTTGCCACCATTGGCGCGGGGCTGGACGCGCGAGCT +
Preference number: 5 (lower is better)
Translates to: EQPQANKAWGAAAPA*AALATIGAGLDARA
Trigger: AGCTCGCGCGTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTGGCGCTGCGGCTCCCCAAGCCTTATTGGCTTGCGGCTGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS TCA 90 bp GCAGTGGCCGGTCGGAGAGGTCCTTTCTCCGGCTCTGGTCGGAGATaGAGCGGCGACCCTCTGCAAAAACGAGACCTGGGGCTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: AVAGRRGPFSGSGRR*SGDPLQKRDLGLSD
Trigger: GTCGCTGAGCCCCAGGTCTCGTTTTTGCAGAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACCGGCCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535139.5
ENST00000649016.1
CDS GCA 90 bp GAGGTCCTTTCTCCGGCTCTGGTCGGAGATGAAGCGGCGACCCTCTaGAAAAACGAGACCTGGGGCTCAGCGACAGCCTGGCCCGGGACA +
Preference number: 5 (lower is better)
Translates to: EVLSPALVGDEAATL*KNETWGSATAWPGT
Trigger: TGTCCCGGGCCAGGCTGTCGCTGAGCCCCAGGTCTCGTTTTTGCAGAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535139.5
ENST00000649016.1
CDS CCA 90 bp CGTCTTTCCGGCAGTGGCCGGTCGGAGAGGTCCTTTCTCCGGCTCTaGTCGGAGATGAAGCGGCGACCCTCGGTCTCTTTGATGGCCTCG +
Preference number: 5 (lower is better)
Translates to: RLSGSGRSERSFLRL*SEMKRRPSVSLMAS
Trigger: CGAGGCCATCAAAGAGACCGAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACCGGCCACTGCCGGAAAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544637.5
CDS CCA 90 bp CGTCTTTCCGGCAGTGGCCGGTCGGAGAGGTCCTTTCTCCGGCTCTaGTCGGAGATGAAGCGGCGACCCTCTGCAAAAACGAGACCTGGG +
Preference number: 5 (lower is better)
Translates to: RLSGSGRSERSFLRL*SEMKRRPSAKTRPG
Trigger: CCCAGGTCTCGTTTTTGCAGAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACCGGCCACTGCCGGAAAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535139.5
ENST00000649016.1
CDS TCA 90 bp TGGCCTGATCCTGGCTCACTGCAGTCTCCACATTTCTGGCTCAGGTaGTTCTCCTGCCCCAACCTCCCGAGTAGCTGGGGCTACAGGCGC +
Preference number: 5 (lower is better)
Translates to: WPDPGSLQSPHFWLR*FSCPNLPSSWGYRR
Trigger: GCGCCTGTAGCCCCAGCTACTCGGGAGGTTGGGGCAGGAGAATCACCTGAGCCAGAAATGTGGAGACTGCAGTGAGCCAGGATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CCA 90 bp AGGGACGCCAGTAAGATGGTTGCTGCCTCCGGAATAGTTAGTAGTTaGGGATTTGGGCTTCGTCTTTCCGGCAGTGGCCGGTCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RDASKMVAASGIVSS*GFGLRLSGSGRSER
Trigger: CCTCTCCGACCGGCCACTGCCGGAAAGACGAAGCCCAAATCCCCAACTACTAACTATTCCGGAGGCAGCAACCATCTTACTGGCGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256969.7
ENST00000535033.5
ENST00000535139.5
ENST00000544637.5
ENST00000649016.1
CDS TCA 90 bp TTGCAAACAGTCACGCCGCCAAAGGATTATCCAGAGGAACAGAACTaGGAGGCTCTCAGATCTTCTGGATTGGAGATACTTAGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: LQTVTPPKDYPEEQN*EALRSSGLEILRQS
Trigger: ACTCTGCCTAAGTATCTCCAATCCAGAAGATCTGAGAGCCTCTCAGTTCTGTTCCTCTGGATAATCCTTTGGCGGCGTGACTGTTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 90 bp GAATCACCTTCTATCCTGTACTCAGTCCCCTATTCAGACAGCTGCTaGCAGGTGACTCCATCTCTCCACTGTAGTCATTTCTTCATCCTT +
Preference number: 5 (lower is better)
Translates to: ESPSILYSVPYSDSC*QVTPSLHCSHFFIL
Trigger: AAGGATGAAGAAATGACTACAGTGGAGAGATGGAGTCACCTGGCAGCAGCTGTCTGAATAGGGGACTGAGTACAGGATAGAAGGTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000649016.1
CDS GCA 90 bp TGTGTCTGTTTGCACAGTGCTGAACACTCTTGGCTGAATGAGAGATaGTGCCATTTGCTGAGTATCTGCACACACAAATGCCAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: CVCLHSAEHSWLNER*CHLLSICTHKCQCS
Trigger: TGAGCACTGGCATTTGTGTGTGCAGATACTCAGCAAATGGCAGCATCTCTCATTCAGCCAAGAGTGTTCAGCACTGTGCAAACAGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS-3UTR CAA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAACAGGTAGAGCATAGCTaGAGGAGTCCAGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKQVEHS*RSPVPS
Trigger: AGAAGGAACTGGACTCCTCAAGCTATGCTCTACCTG...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS TCA 90 bp TCGTTGACAGGCGGTTCCGTTCTCCAGATGATTCTTGCAATCAGCTaGCTAAGTTTCTCTATGGATTTTGCAAACAGTCACGCCGCCAAA +
Preference number: 5 (lower is better)
Translates to: SLTGGSVLQMILAIS*LSFSMDFANSHAAK
Trigger: TTTGGCGGCGTGACTGTTTGCAAAATCCATAGAGAAACTTAGTCAGCTGATTGCAAGAATCATCTGGAGAACGGAACCGCCTGTCAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 90 bp GTCTGTTTGCACAGTGCTGAACACTCTTGGCTGAATGAGAGATGCTaGCATTTGCTGAGTATCTGCACACACAAATGCCAGTGCTCATTA +
Preference number: 5 (lower is better)
Translates to: VCLHSAEHSWLNERC*HLLSICTHKCQCSL
Trigger: TAATGAGCACTGGCATTTGTGTGTGCAGATACTCAGCAAATGGCAGCATCTCTCATTCAGCCAAGAGTGTTCAGCACTGTGCAAACAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS-3UTR CAA 90 bp TCCAGTATATTTTCACCAGTTAAGCAGACTGTCTTCCAGGAATCTGGTTTGATCTTAGTAGTTGGGGATTaGGGCTTCGTCCGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SSIFSPVKQTVFQESGLILVVGD*GFVRQW
Trigger: CCACTGCCGGACGAAGCCCAAATCCCCAACTACTAA...GATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTGAAAATATACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546199.1
CDS-3UTR CAA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTTAGTAGTTGGGGATTaGGGCTTCGTCTTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYLVVGD*GFVFPA
Trigger: TGCCGGAAAGACGAAGCCCAAATCCCCAACTACTAA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAATCTAACAAAACTGGCTaGTTCCCTTCTTCCAATACG +
Preference number: 5 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKSNKTG*FPSSNT
Trigger: CGTATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGA...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS TCA 90 bp GGCATTTCCAGGCTATCCACATCCAAAAGCTTTGCTGAACAAATTTaGGACTTAGAGACTAACAGTATCAGCAGTGTAAGGTGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GISRLSTSKSFAEQI*DLETNSISSVRWQL
Trigger: CAACTGCCACCTTACACTGCTGATACTGTTAGTCTCTAAGTCTCAAATTTGTTCAGCAAAGCTTTTGGATGTGGATAGCCTGGAAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 90 bp CCAGATGATTCTTGCAATCAGCTGACTAAGTTTCTCTATGGATTTTaGAAACAGTCACGCCGCCAAAGGATTATCCAGAGGAACAGAACT +
Preference number: 5 (lower is better)
Translates to: PDDSCNQLTKFLYGF*KQSRRQRIIQRNRT
Trigger: AGTTCTGTTCCTCTGGATAATCCTTTGGCGGCGTGACTGTTTGCAAAATCCATAGAGAAACTTAGTCAGCTGATTGCAAGAATCATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS-3UTR CAA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATACAGGTAGAGCATAGCTaGAGGAGTCCAGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: VMENELPLTKLACSLLPIQVEHS*RSPVPS
Trigger: AGAAGGAACTGGACTCCTCAAGCTATGCTCTACCTG...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS TCA 90 bp GCCAGACTTCTGAGTCCCTTCATGTTCTGCGTCTTTTCAGAACCCTaGAATAACTATAACTTTATCTGTGAGTTTTCGACTCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: ARLLSPFMFCVFSEP*NNYNFICEFSTLAL
Trigger: CAGAGCAAGAGTCGAAAACTCACAGATAAAGTTATAGTTATTTCAGGGTTCTGAAAAGACGCAGAACATGAAGGGACTCAGAAGTCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS GCA 90 bp GGTATTTACATCGTTGACAGGCGGTTCCGTTCTCCAGATGATTCTTaGAATCAGCTGACTAAGTTTCTCTATGGATTTTGCAAACAGTCA +
Preference number: 5 (lower is better)
Translates to: GIYIVDRRFRSPDDS*NQLTKFLYGFCKQS
Trigger: TGACTGTTTGCAAAATCCATAGAGAAACTTAGTCAGCTGATTGCAAGAATCATCTGGAGAACGGAACCGCCTGTCAACGATGTAAATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CCA 90 bp GAATATTCAGGCCCTATCTTTTCTCCATGCCACACTGCTTCTCTGTaGAATGAAACCAGTGTTTTCAGTCACCTTAATGCTCAATTCAGA +
Preference number: 5 (lower is better)
Translates to: EYSGPIFSPCHTASL*NETSVFSHLNAQFR
Trigger: TCTGAATTGAGCATTAAGGTGACTGAAAACACTGGTTTCATTCCACAGAGAAGCAGTGTGGCATGGAGAAAAGATAGGGCCTGAATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS-3UTR CAA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATAGTCCACAGGGACATCTaGTCAGTCTTCAAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: VMENELPLTKLACSLLPIVHRDI*SVFKQD
Trigger: ATCTTGCTTGAAGACTGACAAGATGTCCCTGTGGAC...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS-3UTR CAA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATTCTAACAAAACTGGCTaGTTCCCTTCTTCCAATACG +
Preference number: 5 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYSNKTG*FPSSNT
Trigger: CGTATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGA...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATGAGTACTTGAATCTGTaGAGTCTGTTTGGTCATGGA +
Preference number: 5 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYEYLNL*SLFGHG
Trigger: TCCATGACCAAACAGACTCAACAGATTCAAGTACTC...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp AAGGTAATTCCCAAAGAGCACAAAGGGAGCTCTGAGCTCTGGATCTTTGGCAAACTTAACACAGTGAAATaGCAATTCCAAGTTACAGAG +
Preference number: 5 (lower is better)
Translates to: KVIPKEHKGSSELWIFGKLNTVK*QFQVTE
Trigger: CTCTGTAACTTGGAATTGCAATTTCACTGTGTTAAG...TTTGCCAAAGATCCAGAGCTCAGAGCTCCCTTTGTGCTCTTTGGGAATTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTTTAGTAGTTGGGGATTaGGGCTTCGTCTTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPLVVGD*GFVFPA
Trigger: TGCCGGAAAGACGAAGCCCAAATCCCCAACTACTAA...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp GCTTGTTCCCTTCTTCCAATACGTAAACAACAGAGTGTGTCTCCATCTGCTTATGGTACTGAACTCAAGTaGGCTTTTAAAAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: ACSLLPIRKQQSVSPSAYGTELK*AFKKEE
Trigger: CTCTTCCTTTTTAAAAGCCAACTTGAGTTCAGTACC...ATAAGCAGATGGAGACACACTCTGTTGTTTACGTATTGGAAGAAGGGAACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTGGAGCTTTTAAAATCTaGGTGTTAAGGGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPGAFKI*VLRAPP
Trigger: GGGAGGTGCCCTTAACACCAAGATTTTAAAAGCTCC...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS-3UTR CAA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTCTGAGCTCTGGATCTTaGGCAAACCTTCTACCTCAA +
Preference number: 5 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPLSSGS*ANLLPQ
Trigger: TTGAGGTAGAAGGTTTGCCAAAGATCCAGAGCTCAG...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATAGAGTACTTGAATCTGTaGAGTCTGTTTGGTCATGGA +
Preference number: 5 (lower is better)
Translates to: VMENELPLTKLACSLLPIEYLNL*SLFGHG
Trigger: TCCATGACCAAACAGACTCAACAGATTCAAGTACTC...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATAGGTACTGAACTCAAGTaGGCTTTTAAAAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VMENELPLTKLACSLLPIGTELK*AFKKEE
Trigger: CTCTTCCTTTTTAAAAGCCAACTTGAGTTCAGTACC...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS-3UTR CAA 90 bp GTCATGGAAAATGAGTTACCTCTAACAAAACTGGCTTGTTCCCTTCTTCCAATAGCAGTTAATAAAACATaGCAGCTCAGTCCTCTATTA +
Preference number: 5 (lower is better)
Translates to: VMENELPLTKLACSLLPIAVNKT*QLSPLL
Trigger: TAATAGAGGACTGAGCTGCAATGTTTTATTAACTGC...TATTGGAAGAAGGGAACAAGCCAGTTTTGTTAGAGGTAACTCATTTTCCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535033.5
CDS CCA 90 bp GTTCTGATGGACATTTATTCTTTGGGGAGTTGTTCAAAAACAAACTaGACTGCTTTAATTGAAAGTGAATTTGCTCTCCAAGGAAGTGTT +
Preference number: 5 (lower is better)
Translates to: VLMDIYSLGSCSKTN*TALIESEFALQGSV
Trigger: AACACTTCCTTGGAGAGCAAATTCACTTTCAATTAAAGCAGTCCAGTTTGTTTTTGAACAACTCCCCAAAGAATAAATGTCCATCAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CCA 90 bp ACAGGAAATACCTCCTTTCAATCATGCAATAGGTTTATAAACACCTaGATGCTCACACAGCTTAGCAGTGGTGATTTAATAATAAATGAA +
Preference number: 5 (lower is better)
Translates to: TGNTSFQSCNRFINT*MLTQLSSGDLIINE
Trigger: TTCATTTATTATTAAATCACCACTGCTAAGCTGTGTGAGCATCCAGGTGTTTATAAACCTATTGCATGATTGAAAGGAGGTATTTCCTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS-3UTR CAA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTACTCTTGCTCTGAAATaGGAGCTTTTAAAATCTTGG +
Preference number: 5 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPTLALK*ELLKSW
Trigger: CCAAGATTTTAAAAGCTCCAATTTCAGAGCAAGAGT...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS-3UTR CAA 90 bp TTTATCTTCTTAATTGATTACTCCTGGATGAGCTATAGAGAGTCATACTCTCCTCTTAACACAGTGAAATaGCAATTCCAAGTTACAGAG +
Preference number: 5 (lower is better)
Translates to: FIFLIDYSWMSYRESYSPLNTVK*QFQVTE
Trigger: CTCTGTAACTTGGAATTGCAATTTCACTGTGTTAAG...AGGAGAGTATGACTCTCTATAGCTCATCCAGGAGTAATCAATTAAGAAGATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256969.7
ENST00000535033.5
CDS CAA 90 bp AGGCTTGGGGAGCCGCAGCGCCAGCCTGGGCCGCCCTTGCCACCATaGGCGCGGGGCTGGACGCGCGAGCTCCCAGCTCCGGCGCTCGGC +
Preference number: 6 (lower is better)
Translates to: RLGEPQRQPGPPLPP*ARGWTRELPAPALG
Trigger: GCCGAGCGCCGGAGCTGGGAGCTCGCGCGTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTGGCGCTGCGGCTCCCCAAGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS GCA 72 bp GGCTTGGGGAGCCGCAGCGCCAGCCTGGGCCGCCCTTaGCACCATTGGCGCGGGGCTGGACGCGCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: GLGSRSASLGRP*HHWRGAGRASS
Trigger: GGAGCTCGCGCGTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTGGCGCTGCGGCTCCCCAAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS CCA 72 bp AGCCGCAGCGCCAGCCTGGGCCGCCCTTGCCACCATTaGCGCGGGGCTGGACGCGCGAGCTCCCAGCTCCGG +
Preference number: 6 (lower is better)
Translates to: SRSASLGRPCHH*RGAGRASSQLR
Trigger: CCGGAGCTGGGAGCTCGCGCGTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTGGCGCTGCGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS CAA 72 bp GAGCCGCAGCGCCAGCCTGGGCCGCCCTTGCCACCATaGGCGCGGGGCTGGACGCGCGAGCTCCCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: EPQRQPGPPLPP*ARGWTRELPAP
Trigger: CGGAGCTGGGAGCTCGCGCGTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTGGCGCTGCGGCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS CCA 72 bp CAGCCTGGGCCGCCCTTGCCACCATTGGCGCGGGGCTaGACGCGCGAGCTCCCAGCTCCGGCGCTCGGCATC +
Preference number: 6 (lower is better)
Translates to: QPGPPLPPLARG*TRELPAPALGI
Trigger: GATGCCGAGCGCCGGAGCTGGGAGCTCGCGCGTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS TCA 72 bp CAGGGGCCCTGGAGCTCTGGAGGAAAGCCCCGCGCCTaGCCGGACGCCGCAAGGGCGCTTTGGAGCGGAGGT +
Preference number: 6 (lower is better)
Translates to: QGPWSSGGKPRA*PDAARALWSGG
Trigger: ACCTCCGCTCCAAAGCGCCCTTGCGGCGTCCGGTCAGGCGCGGGGCTTTCCTCCAGAGCTCCAGGGCCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535139.5
CDS CCA 72 bp CAAGCCAATAAGGCTTGGGGAGCCGCAGCGCCAGCCTaGGCCGCCCTTGCCACCATTGGCGCGGGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: QANKAWGAAAPA*AALATIGAGLD
Trigger: GTCCAGCCCCGCGCCAATGGTGGCAAGGGCGGCCCAGGCTGGCGCTGCGGCTCCCCAAGCCTTATTGGCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000543800.5
CDS CCA 72 bp GGCAGTGGCCGGTCGGAGAGGTCCTTTCTCCGGCTCTaGTCGGAGATGAAGCGGCGACCCTGTGCCCCTTTC +
Preference number: 6 (lower is better)
Translates to: GSGRSERSFLRL*SEMKRRPCAPF
Trigger: GAAAGGGGCACAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACCGGCCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256969.7
ENST00000535033.5
ENST00000546199.1
CDS CCA 72 bp GGCAGTGGCCGGTCGGAGAGGTCCTTTCTCCGGCTCTaGTCGGAGATGAAGCGGCGACCCTCGGTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: GSGRSERSFLRL*SEMKRRPSVSL
Trigger: CAAAGAGACCGAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACCGGCCACTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544637.5
CDS CCA 72 bp GGCAGTGGCCGGTCGGAGAGGTCCTTTCTCCGGCTCTaGTCGGAGATGAAGCGGCGACCCTCTGCAAAAACG +
Preference number: 6 (lower is better)
Translates to: GSGRSERSFLRL*SEMKRRPSAKT
Trigger: CGTTTTTGCAGAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACCGGCCACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535139.5
ENST00000649016.1
CDS TCA 72 bp GGTCGGAGAGGTCCTTTCTCCGGCTCTGGTCGGAGATaGAGCGGCGACCCTGTGCCCCTTTCAGGTAGAGCA +
Preference number: 6 (lower is better)
Translates to: GRRGPFSGSGRR*SGDPVPLSGRA
Trigger: TGCTCTACCTGAAAGGGGCACAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256969.7
ENST00000535033.5
ENST00000546199.1
CDS TCA 72 bp GGTCGGAGAGGTCCTTTCTCCGGCTCTGGTCGGAGATaGAGCGGCGACCCTCTGCAAAAACGAGACCTGGGG +
Preference number: 6 (lower is better)
Translates to: GRRGPFSGSGRR*SGDPLQKRDLG
Trigger: CCCCAGGTCTCGTTTTTGCAGAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535139.5
ENST00000649016.1
CDS CAA 90 bp GGAGATGAAGCGGCGACCCTGTGCCCCTTTCAGGTAGAGCATAGCTaGAGGAGTCCAGTTCCTTCTCTCCAACAGTCTCTGCGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: GDEAATLCPFQVEHS*RSPVPSLQQSLRSA
Trigger: TGCGCTCCGCAGAGACTGTTGGAGAGAAGGAACTGGACTCCTCAAGCTATGCTCTACCTGAAAGGGGCACAGGGTCGCCGCTTCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS CCA 72 bp AGTAAGATGGTTGCTGCCTCCGGAATAGTTAGTAGTTaGGGATTTGGGCTTCGTCCGGCAGTGGCCGGTCGG +
Preference number: 6 (lower is better)
Translates to: SKMVAASGIVSS*GFGLRPAVAGR
Trigger: CCGACCGGCCACTGCCGGACGAAGCCCAAATCCCCAACTACTAACTATTCCGGAGGCAGCAACCATCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546199.1
CDS CAA 72 bp GCGGCGACCCTGTGCCCCTTTCAGGTAGAGCATAGCTaGAGGAGTCCAGTTCCTTCTCTCCAACAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: AATLCPFQVEHS*RSPVPSLQQSL
Trigger: CAGAGACTGTTGGAGAGAAGGAACTGGACTCCTCAAGCTATGCTCTACCTGAAAGGGGCACAGGGTCGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS CAA 72 bp GCGGCGACCCTGTGCCCCTTTCAGGTAGAGCATAGCTaGAGGAGTCCAGTTCCTTCTCTCCAACAGTCTCTA +
Preference number: 6 (lower is better)
Translates to: AATLCPFQVEHS*RSPVPSLQQSL
Trigger: TAGAGACTGTTGGAGAGAAGGAACTGGACTCCTCAAGCTATGCTCTACCTGAAAGGGGCACAGGGTCGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535033.5
ENST00000546199.1
CDS CCA 72 bp AGTAAGATGGTTGCTGCCTCCGGAATAGTTAGTAGTTaGGGATTTGGGCTTCGTCTTTCCGGCAGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: SKMVAASGIVSS*GFGLRLSGSGR
Trigger: CCGGCCACTGCCGGAAAGACGAAGCCCAAATCCCCAACTACTAACTATTCCGGAGGCAGCAACCATCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256969.7
ENST00000535033.5
ENST00000535139.5
ENST00000544637.5
ENST00000649016.1
CDS GCA 72 bp CCTTCTATCCTGTACTCAGTCCCCTATTCAGACAGCTaGTGCCAGGTGACTCCATCTCTCCACTGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: PSILYSVPYSDS*CQVTPSLHCSH
Trigger: ATGACTACAGTGGAGAGATGGAGTCACCTGGCAGCAGCTGTCTGAATAGGGGACTGAGTACAGGATAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000649016.1
CDS CCA 72 bp CTGACTTCCAGGATGCCTTCTAGTGGTGGCCATCCATaGCATTTCCAGGCTATCCACATCCAAAAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: LTSRMPSSGGHP*HFQAIHIQKLC
Trigger: GCAAAGCTTTTGGATGTGGATAGCCTGGAAATGCCATGGATGGCCACCACTAGAAGGCATCCTGGAAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 72 bp TCTATCCTGTACTCAGTCCCCTATTCAGACAGCTGCTaGCAGGTGACTCCATCTCTCCACTGTAGTCATTTC +
Preference number: 6 (lower is better)
Translates to: SILYSVPYSDSC*QVTPSLHCSHF
Trigger: GAAATGACTACAGTGGAGAGATGGAGTCACCTGGCAGCAGCTGTCTGAATAGGGGACTGAGTACAGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000649016.1
CDS TCA 72 bp GTCACGCCGCCAAAGGATTATCCAGAGGAACAGAACTaGGAGGCTCTCAGATCTTCTGGATTGGAGATACTT +
Preference number: 6 (lower is better)
Translates to: VTPPKDYPEEQN*EALRSSGLEIL
Trigger: AAGTATCTCCAATCCAGAAGATCTGAGAGCCTCTCAGTTCTGTTCCTCTGGATAATCCTTTGGCGGCGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 72 bp CAGGAAAACAAACACCAGGAAAAGAGCCAAGGTTGTTaGTGCCAGACTTCTGAGTCCCTTCATGTTCTGCGT +
Preference number: 6 (lower is better)
Translates to: QENKHQEKSQGC*CQTSESLHVLR
Trigger: ACGCAGAACATGAAGGGACTCAGAAGTCTGGCAGCAACAACCTTGGCTCTTTTCCTGGTGTTTGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS CAA 90 bp TTGCACAGTGCTGAACACTCTTGGCTGAATGAGAGATGCTGCCATTaGCTGAGTATCTGCACACACAAATGCCAGTGCTCATTACAACCT +
Preference number: 6 (lower is better)
Translates to: LHSAEHSWLNERCCH*LSICTHKCQCSLQP
Trigger: AGGTTGTAATGAGCACTGGCATTTGTGTGTGCAGATACTCAGCAAATGGCAGCATCTCTCATTCAGCCAAGAGTGTTCAGCACTGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 72 bp GAAAACAAACACCAGGAAAAGAGCCAAGGTTGTTGCTaGCAGACTTCTGAGTCCCTTCATGTTCTGCGTCTT +
Preference number: 6 (lower is better)
Translates to: ENKHQEKSQGCC*QTSESLHVLRL
Trigger: AAGACGCAGAACATGAAGGGACTCAGAAGTCTGGCAGCAACAACCTTGGCTCTTTTCCTGGTGTTTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS GCA 72 bp TTGCACAGTGCTGAACACTCTTGGCTGAATGAGAGATaGTGCCATTTGCTGAGTATCTGCACACACAAATGC +
Preference number: 6 (lower is better)
Translates to: LHSAEHSWLNER*CHLLSICTHKC
Trigger: GCATTTGTGTGTGCAGATACTCAGCAAATGGCAGCATCTCTCATTCAGCCAAGAGTGTTCAGCACTGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CAA 72 bp AGGATGAGAGATACGATGAGGAAGAGGAGGCTGGCTTaGGCAGTATGTGTAGGAATCACCTTCTATCCTGTA +
Preference number: 6 (lower is better)
Translates to: RMRDTMRKRRLA*AVCVGITFYPV
Trigger: TACAGGATAGAAGGTGATTCCTACACATACTGCCAAAGCCAGCCTCCTCTTCCTCATCGTATCTCTCATCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537527.1
ENST00000649016.1
CDS GCA 72 bp GAGCGTCAGGCATTTCTCTTTAGTGGGATCAGTCCTTaGAGTAGTCTACACAGCAATCCAAGAGCTAAACAT +
Preference number: 6 (lower is better)
Translates to: ERQAFLFSGISP*SSLHSNPRAKH
Trigger: ATGTTTAGCTCTTGGATTGCTGTGTAGACTACTGCAAGGACTGATCCCACTAAAGAGAAATGCCTGACGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS TCA 72 bp TGGTACAAATCTTTGCTCTACCATTTATGTGCTGAGTaGTGTTGGGCAAGTTACTTGACCCCTCTAACCCTC +
Preference number: 6 (lower is better)
Translates to: WYKSLLYHLCAE*CWASYLTPLTL
Trigger: GAGGGTTAGAGGGGTCAAGTAACTTGCCCAACATCACTCAGCACATAAATGGTAGAGCAAAGATTTGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS TCA 72 bp GACCTGGTACAAATCTTTGCTCTACCATTTATGTGCTaGGTGATGTTGGGCAAGTTACTTGACCCCTCTAAC +
Preference number: 6 (lower is better)
Translates to: DLVQIFALPFMC*VMLGKLLDPSN
Trigger: GTTAGAGGGGTCAAGTAACTTGCCCAACATCACTCAGCACATAAATGGTAGAGCAAAGATTTGTACCAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 72 bp TCTTGCAATCAGCTGACTAAGTTTCTCTATGGATTTTaGAAACAGTCACGCCGCCAAAGGATTATCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SCNQLTKFLYGF*KQSRRQRIIQR
Trigger: CCTCTGGATAATCCTTTGGCGGCGTGACTGTTTGCAAAATCCATAGAGAAACTTAGTCAGCTGATTGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 72 bp ATCGTTGACAGGCGGTTCCGTTCTCCAGATGATTCTTaGAATCAGCTGACTAAGTTTCTCTATGGATTTTGC +
Preference number: 6 (lower is better)
Translates to: IVDRRFRSPDDS*NQLTKFLYGFC
Trigger: GCAAAATCCATAGAGAAACTTAGTCAGCTGATTGCAAGAATCATCTGGAGAACGGAACCGCCTGTCAACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CAA 72 bp TGCTTTGGCTTTTGTGTTCTTCAGGTATTTACATCGTaGACAGGCGGTTCCGTTCTCCAGATGATTCTTGCA +
Preference number: 6 (lower is better)
Translates to: CFGFCVLQVFTS*TGGSVLQMILA
Trigger: TGCAAGAATCATCTGGAGAACGGAACCGCCTGTCAACGATGTAAATACCTGAAGAACACAAAAGCCAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CAA 72 bp CATCAGGATCTAGCACTGATCTTACTAGCTATTCCATaGTCAGTGCCTCACTTGATGTGTTACTGGTATAAG +
Preference number: 6 (lower is better)
Translates to: HQDLALILLAIP*SVPHLMCYWYK
Trigger: CTTATACCAGTAACACATCAAGTGAGGCACTGACAATGGAATAGCTAGTAAGATCAGTGCTAGATCCTGATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS TCA 72 bp CTGAGTCCCTTCATGTTCTGCGTCTTTTCAGAACCCTaGAATAACTATAACTTTATCTGTGAGTTTTCGACT +
Preference number: 6 (lower is better)
Translates to: LSPFMFCVFSEP*NNYNFICEFST
Trigger: AGTCGAAAACTCACAGATAAAGTTATAGTTATTTCAGGGTTCTGAAAAGACGCAGAACATGAAGGGACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256969.7
CDS TCA 72 bp GGTCACTGTTACCATAAACAACCATCCCTAATAACATaGCTTATATTCCACCTATATCAGGTTTCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: GHCYHKQPSLIT*LIFHLYQVSRG
Trigger: TCCTCTGGAAACCTGATATAGGTGGAATATAAGTCATGTTATTAGGGATGGTTGTTTATGGTAACAGTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CAA 90 bp CTCACACAGCTTAGCAGTGGTGATTTAATAATAAATGAATTGACTTaGCCTTCACATAATGTGTCTGTTTGCACAGTGCTGAACACTCTT +
Preference number: 6 (lower is better)
Translates to: LTQLSSGDLIINELT*PSHNVSVCTVLNTL
Trigger: AAGAGTGTTCAGCACTGTGCAAACAGACACATTATGTGAAGGCAAAGTCAATTCATTTATTATTAAATCACCACTGCTAAGCTGTGTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS TCA 72 bp TCTGACTTTCATGTTTATGATTCTAGCATTCAGAGTTaGTTGCTTAGCTTATTCAGAGGTGGTCATTCCACT +
Preference number: 6 (lower is better)
Translates to: SDFHVYDSSIQS*LLSLFRGGHST
Trigger: AGTGGAATGACCACCTCTGAATAAGCTAAGCAATCAACTCTGAATGCTAGAATCATAAACATGAAAGTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS GCA 72 bp AAAATGATGACTACAGGAAATACCTCCTTTCAATCATaGAATAGGTTTATAAACACCTGGATGCTCACACAG +
Preference number: 6 (lower is better)
Translates to: KMMTTGNTSFQS*NRFINTWMLTQ
Trigger: CTGTGTGAGCATCCAGGTGTTTATAAACCTATTGCATGATTGAAAGGAGGTATTTCCTGTAGTCATCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CAA 90 bp GATCTAGCACTGATCTTACTAGCTATTCCATTGTCAGTGCCTCACTaGATGTGTTACTGGTATAAGGAAACATTTTATGAAGTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: DLALILLAIPLSVPH*MCYWYKETFYEVEE
Trigger: TTCTTCAACTTCATAAAATGTTTCCTTATACCAGTAACACATCAAGTGAGGCACTGACAATGGAATAGCTAGTAAGATCAGTGCTAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CAA 90 bp TTCTCTGCCTTAATGCTTGAAATGGTTCTGATGGACATTTATTCTTaGGGGAGTTGTTCAAAAACAAACTGGACTGCTTTAATTGAAAGT +
Preference number: 6 (lower is better)
Translates to: FSALMLEMVLMDIYS*GSCSKTNWTALIES
Trigger: ACTTTCAATTAAAGCAGTCCAGTTTGTTTTTGAACAACTCCCCAAAGAATAAATGTCCATCAGAACCATTTCAAGCATTAAGGCAGAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649016.1
CDS CCA 72 bp GACATTTATTCTTTGGGGAGTTGTTCAAAAACAAACTaGACTGCTTTAATTGAAAGTGAATTTGCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: DIYSLGSCSKTN*TALIESEFALQ
Trigger: TTGGAGAGCAAATTCACTTTCAATTAAAGCAGTCCAGTTTGTTTTTGAACAACTCCCCAAAGAATAAATGTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649016.1