Pregenerated sensors for SPTSSA (Homo sapiens)
Ensembl gene IDs: ENSG00000165389Ensembl transcript IDs: ENST00000298130.5
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTCACCTGGATACTCATTGAAACTAATGATTCTCAACTTCTCCTaGCTTCAACTCACCAGAGGAATATTAGACATCCACTTGTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: RSPGYSLKLMILNFS*LQLTRGILDIHLLV Trigger: CACTAACAAGTGGATGTCTAATATTCCTCTGGTGAGTTGAAGGCAGGAGAAGTTGAGAATCATTAGTTTCAATGAGTATCCAGGTGACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR CCA 90 bp | ACTCACCAGAGGAATATTAGACATCCACTTGTTAGTGGTTCTCTATaGGGGATAGTAGAGGAAAGCCAAATTTGGGCATTAATAGAACAA | + |
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Preference number: 1 (lower is better) Translates to: THQRNIRHPLVSGSL*GIVEESQIWALIEQ Trigger: TTGTTCTATTAATGCCCAAATTTGGCTTTCCTCTACTATCCCCCATAGAGAACCACTAACAAGTGGATGTCTAATATTCCTCTGGTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCATCAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCTGTTGCACTCCATCCTaGGCGACAGGGCAAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: LHQTVSINFSDHLSRDISCCTPS*ATGQDS Trigger: GGAGTCTTGCCCTGTCGCCCAGGATGGAGTGCAACA...GGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCAGGAGGTCAGGAGTTTaGGACCATCCTGGCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: QTVSINFSDHLSRDISHFRRSGV*DHPGQH Trigger: GTGTTGGCCAGGATGGTCTCAAACTCCTGACCTCCT...GAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR GCA 90 bp | CAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCCCGAGATCATGCTGTTaGACTCCATCCTGGGCGACA | + |
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Preference number: 2 (lower is better) Translates to: QTVSINFSDHLSRDISHFPRSCC*TPSWAT Trigger: TGTCGCCCAGGATGGAGTGCAACAGCATGATCTCGG...GAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR TCA 90 bp | AACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTGGCAGGAGAATCACTTaGTCCCAGGAGATGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NFSDHLSRDISHFSFDSPGRRIT*SQEMEV Trigger: AACCTCCATCTCCTGGGATCAAGTGATTCTCCTGCC...AGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATCAAATTGCCGGTTTCTaGGTAGAGGGCCAGGATAGG | + |
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Preference number: 2 (lower is better) Translates to: SDHLSRDISHFSFDSPQDQIAGF*VEGQDR Trigger: CCTATCCTGGCCCTCTACTCAGAAACCGGCAATTTG...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATAAAATACCTCAATTTTaGCCGGGCGCGGTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SDHLSRDISHFSFDSPQDKIPQF*PGAVAH Trigger: GTGAGCCACCGCGCCCGGCCAAAATTGAGGTATTTT...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR GCA 90 bp | CCTTCAACTCACCAGAGGAATATTAGACATCCACTTGTTAGTGGTTCTCTATGGAGTGAACCGAGATCATaGTGTTGCACTCCATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PSTHQRNIRHPLVSGSLWSEPRS*CCTPSW Trigger: CCAGGATGGAGTGCAACAGCATGATCTCGGTTCACT...CCATAGAGAACCACTAACAAGTGGATGTCTAATATTCCTCTGGTGAGTTGAAGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATGTTAGTGGTTCTCTATaGGGGATAGTAGAGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SDHLSRDISHFSFDSPQDVSGSL*GIVEES Trigger: GCTTTCCTCTACTATCCCCCATAGAGAACCACTAAC...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR GCA 90 bp | AACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTATAAGACATACTTACTaGTTATCTGGTCCTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: NFSDHLSRDISHFSFDSPIRHTY*LSGPPQ Trigger: CTGTGGAGGACCAGATAAGCAGTAAGTATGTCTTAT...AGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR TCA 72 bp | GGAGAATCACTTGATCCCAGGAGATGGAGGTTGCAGTaGACCGAGATCATGCTGTTGCACTCCATCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: GESLDPRRWRLQ*TEIMLLHSILG Trigger: GCCCAGGATGGAGTGCAACAGCATGATCTCGGTTCACTGCAACCTCCATCTCCTGGGATCAAGTGATTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR CAA 90 bp | CCTTCAACTCACCAGAGGAATATTAGACATCCACTTGTTAGTGGTTCTCTATGGACCGAGATCATGCTGTaGCACTCCATCCTGGGCGAC | + |
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Preference number: 3 (lower is better) Translates to: PSTHQRNIRHPLVSGSLWTEIML*HSILGD Trigger: GTCGCCCAGGATGGAGTGCAACAGCATGATCTCGGT...CCATAGAGAACCACTAACAAGTGGATGTCTAATATTCCTCTGGTGAGTTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR CAA 90 bp | AACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTAGGCAGGAGAATCACTaGATCCCAGGAGATGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: NFSDHLSRDISHFSFDSPRQENH*IPGDGG Trigger: ACCTCCATCTCCTGGGATCAAGTGATTCTCCTGCCT...AGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR CAA 90 bp | TTGCATCAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCATATTAGACATCCACTaGTTAGTGGTTCTCTATGGG | + |
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Preference number: 3 (lower is better) Translates to: LHQTVSINFSDHLSRDISILDIH*LVVLYG Trigger: CCCATAGAGAACCACTAACAAGTGGATGTCTAATAT...GGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR TCA 72 bp | CAGACATTTGCATCAGACAGTGAGCATAAACTTCTCTaGTCACCTCTCAAGAGACATCTCCCATTTCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: QTFASDSEHKLL*SPLKRHLPFLF Trigger: AAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAAATGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR-3UTR CAA 90 bp | TTGCATCAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCTCACCTGGATACTCATaGAAACTAATGATTCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: LHQTVSINFSDHLSRDISSPGYS*KLMILN Trigger: GTTGAGAATCATTAGTTTCAATGAGTATCCAGGTGA...GGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR GCA 72 bp | GGATACTCATTGAAACTAATGATTCTCAACTTCTCCTaGCTTCAACTCACCAGAGGAATATTAGACATCCAC | + |
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Preference number: 3 (lower is better) Translates to: GYSLKLMILNFS*LQLTRGILDIH Trigger: GTGGATGTCTAATATTCCTCTGGTGAGTTGAAGGCAGGAGAAGTTGAGAATCATTAGTTTCAATGAGTATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR CCA 72 bp | AGGAATATTAGACATCCACTTGTTAGTGGTTCTCTATaGGGGATAGTAGAGGAAAGCCAAATTTGGGCATTA | + |
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Preference number: 3 (lower is better) Translates to: RNIRHPLVSGSL*GIVEESQIWAL Trigger: TAATGCCCAAATTTGGCTTTCCTCTACTATCCCCCATAGAGAACCACTAACAAGTGGATGTCTAATATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR CCA 72 bp | GTGACTCACTTTATTGAGATATTCACTTTATTGCAGTaGTCTGAAACTGAACCCACAATAACTACAAGGTAT | + |
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Preference number: 3 (lower is better) Translates to: VTHFIEIFTLLQ*SETEPTITTRY Trigger: ATACCTTGTAGTTATTGTGGGTTCAGTTTCAGACCACTGCAATAAAGTGAATATCTCAATAAAGTGAGTCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR GCA 90 bp | CAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCGCGCCATCCCCGCCATaGGCCTCCCGCGATGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QTVSINFSDHLSRDISHFAPSPP*ASRDAA Trigger: AGCTGCATCGCGGGAGGCGCATGGCGGGGATGGCGC...GAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR TCA 90 bp | AACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTGCATGTAGAGCGCCGTaGCCAGCAGGTACTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: NFSDHLSRDISHFSFDSPACRAP*PAGTGS Trigger: ACTACCAGTACCTGCTGGTCACGGCGCTCTACATGC...AGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATTGTTGCACTCCATCCTaGGCGACAGGGCAAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: SDHLSRDISHFSFDSPQDCCTPS*ATGQDS Trigger: GGAGTCTTGCCCTGTCGCCCAGGATGGAGTGCAACA...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR TCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATAGGAGGTCAGGAGTTTaGGACCATCCTGGCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: SDHLSRDISHFSFDSPQDRRSGV*DHPGQH Trigger: GTGTTGGCCAGGATGGTCTCAAACTCCTGACCTCCT...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR GCA 90 bp | CCTTCAACTCACCAGAGGAATATTAGACATCCACTTGTTAGTGGTTCTCTATGGCCGAGATCATGCTGTTaGACTCCATCCTGGGCGACA | + |
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Preference number: 4 (lower is better) Translates to: PSTHQRNIRHPLVSGSLWPRSCC*TPSWAT Trigger: TGTCGCCCAGGATGGAGTGCAACAGCATGATCTCGG...CCATAGAGAACCACTAACAAGTGGATGTCTAATATTCCTCTGGTGAGTTGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR TCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATGGCAGGAGAATCACTTaGTCCCAGGAGATGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SDHLSRDISHFSFDSPQDGRRIT*SQEMEV Trigger: AACCTCCATCTCCTGGGATCAAGTGATTCTCCTGCC...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR TCA 90 bp | CCTTCAACTCACCAGAGGAATATTAGACATCCACTTGTTAGTGGTTCTCTATGGCAAATTGCCGGTTTCTaGGTAGAGGGCCAGGATAGG | + |
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Preference number: 4 (lower is better) Translates to: PSTHQRNIRHPLVSGSLWQIAGF*VEGQDR Trigger: CCTATCCTGGCCCTCTACTCAGAAACCGGCAATTTG...CCATAGAGAACCACTAACAAGTGGATGTCTAATATTCCTCTGGTGAGTTGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CCA 90 bp | AACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTAAAATACCTCAATTTTaGCCGGGCGCGGTGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: NFSDHLSRDISHFSFDSPKIPQF*PGAVAH Trigger: GTGAGCCACCGCGCCCGGCCAAAATTGAGGTATTTT...AGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR GCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATAGTGAACCGAGATCATaGTGTTGCACTCCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SDHLSRDISHFSFDSPQDSEPRS*CCTPSW Trigger: CCAGGATGGAGTGCAACAGCATGATCTCGGTTCACT...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR GCA 90 bp | CAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCATTCTCAACTTCTCCTaGCTTCAACTCACCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QTVSINFSDHLSRDISHFILNFS*LQLTRG Trigger: TCCTCTGGTGAGTTGAAGGCAGGAGAAGTTGAGAAT...GAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR GCA 90 bp | TTGCATCAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCAGAGTGAAGACAAATTaGCGGTTTCTGAGTAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LHQTVSINFSDHLSRDISRVKTN*RFLSRG Trigger: CCCTCTACTCAGAAACCGGCAATTTGTCTTCACTCT...GGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR TCA 90 bp | AACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTGAGCATAAACTTCTCTaGTCACCTCTCAAGAGACAT | + |
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Preference number: 4 (lower is better) Translates to: NFSDHLSRDISHFSFDSPEHKLL*SPLKRH Trigger: ATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTC...AGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CCA 90 bp | CAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCATCCTGGTCGCATCTTaGTCATTGTACGATTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: QTVSINFSDHLSRDISHFILVAS*SLYDFK Trigger: TTTGAAATCGTACAATGACCAAGATGCGACCAGGAT...GAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR GCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATATAAGACATACTTACTaGTTATCTGGTCCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: SDHLSRDISHFSFDSPQDIRHTY*LSGPPQ Trigger: CTGTGGAGGACCAGATAAGCAGTAAGTATGTCTTAT...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CCA 90 bp | AACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTTTCACTTTATTGCAGTaGTCTGAAACTGAACCCACA | + |
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Preference number: 4 (lower is better) Translates to: NFSDHLSRDISHFSFDSPFTLLQ*SETEPT Trigger: TGTGGGTTCAGTTTCAGACCACTGCAATAAAGTGAA...AGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR GCA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATAGATATTCACTTTATTaGAGTGGTCTGAAACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SDHLSRDISHFSFDSPQDRYSLY*SGLKLN Trigger: GTTCAGTTTCAGACCACTGCAATAAAGTGAATATCT...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| 3UTR CAA 72 bp | CTTCATGTGACTCACTTTATTGAGATATTCACTTTATaGCAGTGGTCTGAAACTGAACCCACAATAACTACA | + |
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Preference number: 4 (lower is better) Translates to: LHVTHFIEIFTL*QWSETEPTITT Trigger: TGTAGTTATTGTGGGTTCAGTTTCAGACCACTGCAATAAAGTGAATATCTCAATAAAGTGAGTCACATGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CAA 90 bp | TTGCATCAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCACCGAGATCATGCTGTaGCACTCCATCCTGGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: LHQTVSINFSDHLSRDISTEIML*HSILGD Trigger: GTCGCCCAGGATGGAGTGCAACAGCATGATCTCGGT...GGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CAA 90 bp | CAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCGAAACCAGCATGGAATaGAACACCGTCCGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: QTVSINFSDHLSRDISHFETSME*NTVRSQ Trigger: CTGGGAGCGGACGGTGTTCAATTCCATGCTGGTTTC...GAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CAA 90 bp | TTGCATCAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCAGGCAGGAGAATCACTaGATCCCAGGAGATGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LHQTVSINFSDHLSRDISRQENH*IPGDGG Trigger: ACCTCCATCTCCTGGGATCAAGTGATTCTCCTGCCT...GGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CAA 90 bp | CAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCGATCCTGGTCGCATCTaGGTCATTGTACGATTTCAA | + |
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Preference number: 5 (lower is better) Translates to: QTVSINFSDHLSRDISHFDPGRI*VIVRFQ Trigger: TTGAAATCGTACAATGACCAAGATGCGACCAGGATC...GAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CAA 90 bp | TTGCATCAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCTCTCCCATTTCTCTTTaGACTCTCCTCAAGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: LHQTVSINFSDHLSRDISSPISL*TLLKIS Trigger: GGAAATCTTGAGGAGAGTCAAAAGAGAAATGGGAGA...GGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CAA 90 bp | TCTGATCACCTCTCAAGAGACATCTCCCATTTCTCTTTTGACTCTCCTCAAGATATATTAGACATCCACTaGTTAGTGGTTCTCTATGGG | + |
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Preference number: 5 (lower is better) Translates to: SDHLSRDISHFSFDSPQDILDIH*LVVLYG Trigger: CCCATAGAGAACCACTAACAAGTGGATGTCTAATAT...ATCTTGAGGAGAGTCAAAAGAGAAATGGGAGATGTCTCTTGAGAGGTGATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CAA 90 bp | CAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCCATTTCTCACCTGGATACTCATaGAAACTAATGATTCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: QTVSINFSDHLSRDISHFSPGYS*KLMILN Trigger: GTTGAGAATCATTAGTTTCAATGAGTATCCAGGTGA...GAAATGGGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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| CDS-3UTR CAA 90 bp | TTGCATCAGACAGTGAGCATAAACTTCTCTGATCACCTCTCAAGAGACATCTCCGAGATATTCACTTTATaGCAGTGGTCTGAAACTGAA | + |
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Preference number: 5 (lower is better) Translates to: LHQTVSINFSDHLSRDISEIFTL*QWSETE Trigger: TTCAGTTTCAGACCACTGCAATAAAGTGAATATCTC...GGAGATGTCTCTTGAGAGGTGATCAGAGAAGTTTATGCTCACTGTCTGATGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298130.5 |
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