RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPTLC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100596

Ensembl transcript IDs: ENST00000216484.7, ENST00000554901.1, ENST00000556607.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTaGCACTGCCCCTGCCCCTCACCCACCAGGAGTGCACATCACTCT +
Preference number: 1 (lower is better)
Translates to: MQATGSARSNQFFAH*HCPCPSPTRSAHHS
Trigger: AGAGTGATGTGCACTCCTGGTGGGTGAGGGGCAGGGGCAGTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 90 bp AAACAACAGTTACTCACATTCTTTCTTCACGGCCTACGGCATGACTaGCAGTTCTGCACTGTTGCCCAATCCCGGATCACTAGGAACCAG +
Preference number: 1 (lower is better)
Translates to: KQQLLTFFLHGLRHD*QFCTVAQSRITRNQ
Trigger: CTGGTTCCTAGTGATCCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATGCCGTAGGCCGTGAAGAAAGAATGTGAGTAACTGTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 90 bp AGAAACCTGGGAAGAGCGTTGGAAAAAGCAGACTCTGAGTTGGCTTaGGTCTCCTCGTGCATAGAAGCATTCACTCATCCATGCAGATGG +
Preference number: 1 (lower is better)
Translates to: RNLGRALEKADSELA*VSSCIEAFTHPCRW
Trigger: CCATCTGCATGGATGAGTGAATGCTTCTATGCACGAGGAGACTCAAGCCAACTCAGAGTCTGCTTTTTCCAACGCTCTTCCCAGGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR GCA 90 bp TTACTCACATTCTTTCTTCACGGCCTACGGCATGACTGGCAGTTCTaGACTGTTGCCCAATCCCGGATCACTAGGAACCAGAAATCCTTA +
Preference number: 1 (lower is better)
Translates to: LLTFFLHGLRHDWQF*TVAQSRITRNQKSL
Trigger: TAAGGATTTCTGGTTCCTAGTGATCCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATGCCGTAGGCCGTGAAGAAAGAATGTGAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 90 bp GTAAACAAAACCTTGTCCCCAGCTCCACCAAGCCACTCCCAAGGGTaGACTGTGAATGTGACACTTCCAGACTCACCAGAGATTAGAAAA +
Preference number: 1 (lower is better)
Translates to: VNKTLSPAPPSHSQG*TVNVTLPDSPEIRK
Trigger: TTTTCTAATCTCTGGTGAGTCTGGAAGTGTCACATTCACAGTCCACCCTTGGGAGTGGCTTGGTGGAGCTGGGGACAAGGTTTTGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 90 bp GCTTTGCAAAAGAAACCTGGGAAGAGCGTTGGAAAAAGCAGACTCTaGGTTGGCTTGAGTCTCCTCGTGCATAGAAGCATTCACTCATCC +
Preference number: 1 (lower is better)
Translates to: ALQKKPGKSVGKSRL*VGLSLLVHRSIHSS
Trigger: GGATGAGTGAATGCTTCTATGCACGAGGAGACTCAAGCCAACTCAGAGTCTGCTTTTTCCAACGCTCTTCCCAGGTTTCTTTTGCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 90 bp CAAGACTTAATGTTAAGGGTAAAGACACCACGCCACCCTAGTCAGTaGCATGTACTCCACTTTCCAGGAAGACCTGGGCCAAATGACCAA +
Preference number: 1 (lower is better)
Translates to: QDLMLRVKTPRHPSQ*HVLHFPGRPGPNDQ
Trigger: TTGGTCATTTGGCCCAGGTCTTCCTGGAAAGTGGAGTACATGTCACTGACTAGGGTGGCGTGGTGTCTTTACCCTTAACATTAAGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR GCA 90 bp ATGTACTCCACTTTCCAGGAAGACCTGGGCCAAATGACCAAGCTTTaGAAAAGAAACCTGGGAAGAGCGTTGGAAAAAGCAGACTCTGAG +
Preference number: 1 (lower is better)
Translates to: MYSTFQEDLGQMTKL*KRNLGRALEKADSE
Trigger: CTCAGAGTCTGCTTTTTCCAACGCTCTTCCCAGGTTTCTTTTGCAAAGCTTGGTCATTTGGCCCAGGTCTTCCTGGAAAGTGGAGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 90 bp AGGGATCATCAAGACTGTGTGGACATGCTAGCTGAATTGACAGGGTaGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGCTTTTTATA +
Preference number: 1 (lower is better)
Translates to: RDHQDCVDMLAELTG*VPVSCEEPARMLFI
Trigger: TATAAAAAGCATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAGCATGTCCACACAGTCTTGATGATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 90 bp AAAGGCGCCAATTTTGGCAGGCATGTAGAGCATCAAAGGCACTACTaGAGAGTCTTCATTTCCATAGATGATGAAGCCCATCTCTTTCAG +
Preference number: 1 (lower is better)
Translates to: KGANFGRHVEHQRHY*RVFISIDDEAHLFQ
Trigger: CTGAAAGAGATGGGCTTCATCATCTATGGAAATGAAGACTCTCCAGTAGTGCCTTTGATGCTCTACATGCCTGCCAAAATTGGCGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556607.1
3UTR CCA 90 bp AGAAGGCATTACGGAGACAAATCACTGGAAGCATGTTCAACTCCTTaGTGTTTGAAGAGGCATGACACAAACATAGAGCCCTTAGTGGTT +
Preference number: 1 (lower is better)
Translates to: RRHYGDKSLEACSTP*CLKRHDTNIEPLVV
Trigger: AACCACTAAGGGCTCTATGTTTGTGTCATGCCTCTTCAAACACCAAGGAGTTGAACATGCTTCCAGTGATTTGTCTCCGTAATGCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 90 bp CCTTGCAAATTCCAGTTTACAGGTAACTTGGTCAGGGGAAAAATATaGGTCAACGAAGTAAGATCTCAGCTCTCCCATAAGCTATTGCTC +
Preference number: 1 (lower is better)
Translates to: PCKFQFTGNLVRGKI*VNEVRSQLSHKLLL
Trigger: GAGCAATAGCTTATGGGAGAGCTGAGATCTTACTTCGTTGACCCATATTTTTCCCCTGACCAAGTTACCTGTAAACTGGAATTTGCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR GCA 90 bp ATAGCAATGCTTCAAACAACAACTGCCCATAACCCTACAAATCCTTaGAAAACAACAGTTACTCACATTCTTTCTTCACGGCCTACGGCA +
Preference number: 1 (lower is better)
Translates to: IAMLQTTTAHNPTNP*KTTVTHILSSRPTA
Trigger: TGCCGTAGGCCGTGAAGAAAGAATGTGAGTAACTGTTGTTTTGCAAGGATTTGTAGGGTTATGGGCAGTTGTTGTTTGAAGCATTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 90 bp GAAAAAGTGCTAAGGACTAGTCACACCTCTATCAATCGACTCAGATaGTCAGTTTTGGTAGTCATGGTTAACCGGTATCTGTTTGAATCC +
Preference number: 1 (lower is better)
Translates to: EKVLRTSHTSINRLR*SVLVVMVNRYLFES
Trigger: GGATTCAAACAGATACCGGTTAACCATGACTACCAAAACTGATCATCTGAGTCGATTGATAGAGGTGTGACTAGTCCTTAGCACTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 90 bp CCAAAGCATTTTTGCTTGACTGATTCCTCTACTATTATGACTGGCTaGCTATTAAAACCAGGTGAAAGTGGACAGAAATCTAAGTCAAGT +
Preference number: 1 (lower is better)
Translates to: PKHFCLTDSSTIMTG*LLKPGESGQKSKSS
Trigger: ACTTGACTTAGATTTCTGTCCACTTTCACCTGGTTTTAATAGCCAGCCAGTCATAATAGTAGAGGAATCAGTCAAGCAAAAATGCTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554901.1
3UTR TCA 90 bp ACCATTATGAAGAAGTATTTGATGGTAAAGGAAGAAATCATCTGGTaGCCAGAAGAAAATGGAATAAGACCAAACCCTTGGGAGATTACA +
Preference number: 1 (lower is better)
Translates to: TIMKKYLMVKEEIIW*PEENGIRPNPWEIT
Trigger: TGTAATCTCCCAAGGGTTTGGTCTTATTCCATTTTCTTCTGGTCACCAGATGATTTCTTCCTTTACCATCAAATACTTCTTCATAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 90 bp TACACTGTTTTTCCATTCTGTTCCCAATCCTTCTCCTGTAATACTTaGTGGATACAAAAAGACAAACTGATCCTGGGTATAATATGCCAA +
Preference number: 1 (lower is better)
Translates to: YTVFPFCSQSFSCNT*WIQKDKLILGIICQ
Trigger: TTGGCATATTATACCCAGGATCAGTTTGTCTTTTTGTATCCATCAAGTATTACAGGAGAAGGATTGGGAACAGAATGGAAAAACAGTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp GCCTTGAGACCTCTGAGACCTGGATGGGAAGTAAGTGGAAGGCACTaGCTCCCTAGGGAGGAGGGCCAGGTAAGTATCCAGGCTGCGGAG +
Preference number: 2 (lower is better)
Translates to: ALRPLRPGWEVSGRH*LPREEGQVSIQAAE
Trigger: CTCCGCAGCCTGGATACTTACCTGGCCCTCCTCCCTAGGGAGCAAGTGCCTTCCACTTACTTCCCATCCAGGTCTCAGAGGTCTCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp CTGCCCCTCACCCACCAGGAGTGCACATCACTCTACGGAGCAGCTTaGTACCCAACACTCAGATGTGAGAGTGGCCTTCTCACCAGGGTG +
Preference number: 2 (lower is better)
Translates to: LPLTHQECTSLYGAA*YPTLRCESGLLTRV
Trigger: CACCCTGGTGAGAAGGCCACTCTCACATCTGAGTGTTGGGTACAAAGCTGCTCCGTAGAGTGATGTGCACTCCTGGTGGGTGAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTAGGTGGGATTATAGGTaGCCGCCACCACGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLRWDYR*PPPRPA
Trigger: AGCTGGGCGTGGTGGCGGGCACCTATAATCCCACCT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTCCCAACACTCAGATGTaGGAGTGGCCTTCTCACCAG +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLPNTQM*EWPSHQ
Trigger: CTGGTGAGAAGGCCACTCTCACATCTGAGTGTTGGG...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCACAATCTCGTCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSTISSH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGACGAGATTGT...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTGGGGAATGGCCTGTGTaGTTAGCCAGAGACAGGCTA +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLGEWPV*LARDRL
Trigger: TAGCCTGTCTCTGGCTAACCACACAGGCCATTCCCC...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTAAGTCTGCAAGGTGCTaGGAGAGGGGAATGGCCTGT +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLKSARC*ERGMAC
Trigger: ACAGGCCATTCCCCTCTCCCAGCACCTTGCAGACTT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGACCGCCACTGCTGCTTaGTCCACTCCTCATATGGGC +
Preference number: 2 (lower is better)
Translates to: LAELTGWVPVSCEEPARMTATAA*STPHMG
Trigger: GCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGT...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGCAATTCTTTGCACACTaGCACTGCCCCTGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: LAELTGWVPVSCEEPARMQFFAH*HCPCPS
Trigger: TGAGGGGCAGGGGCAGTGGCAGTGTGCAAAGAATTG...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTCCTCTGAGACCTGGATaGGAAGTAAGTGGAAGGCAC +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLPLRPG*EVSGRH
Trigger: GTGCCTTCCACTTACTTCCCATCCAGGTCTCAGAGG...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCCAGGCTAGAGTGCAGTaGCACAATCTCGTCTCACTG +
Preference number: 2 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSQARVQ*HNLVSL
Trigger: CAGTGAGACGAGATTGTGCCACTGCACTCTAGCCTG...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTGCAATGTCTTTCACGTaGGATGGCCACAGAAGTGTG +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLAMSFT*DGHRSV
Trigger: CACACTTCTGTGGCCATCTCACGTGAAAGACATTGC...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGGGGGTCTTGCTGTGTTaGCCAGGCTACGCTCAAATT +
Preference number: 2 (lower is better)
Translates to: LAELTGWVPVSCEEPARMGVLLC*PGYAQI
Trigger: AATTTGAGCGTAGCCTGGGCAACACAGCAAGACCCC...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGATGGCCACAGAAGTGTaGTTCCTGGAACTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: LAELTGWVPVSCEEPARMMATEV*FLELAH
Trigger: GTGAGCCAGTTCCAGGAACCACACTTCTGTGGCCAT...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCGTCTTTCACGTGAGATaGCCACAGAAGTGTGGTTCC +
Preference number: 2 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSVFHVR*PQKCGS
Trigger: GGAACCACACTTCTGTGGCCATCTCACGTGAAAGAC...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp ACAACGACACCGATGTTCCGCTTCAGCATCTCCCGTCCAAAGGCGCCAATTTTGCTTTCAGGCGTCTCCTaGAATACCTGGTGTTTTCAG +
Preference number: 2 (lower is better)
Translates to: TTTPMFRFSISRPKAPILLSGVS*NTWCFQ
Trigger: CTGAAAACACCAGGTATTTCAGGAGACGCCTGAAAG...CAAAATTGGCGCCTTTGGACGGGAGATGCTGAAGCGGAACATCGGTGTCGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556607.1
3UTR-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCGAAAGCAGTAGGAAATaGAAGCCACAGGCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSESSRK*KPQALQ
Trigger: TTGCAGAGCCTGTGGCTTGCATTTCCTACTGCTTTC...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp GTTACAGAGAGGGATCATCAAGACTGTGTGGACATGCTAGCTGAATaGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATG +
Preference number: 2 (lower is better)
Translates to: VTERDHQDCVDMLAE*TGWVPVSCEEPARM
Trigger: CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAGCATGTCCACACAGTCTTGATGATCCCTCTCTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCGCCAGCAGTAGCTCTTaGTGGGCCCAAGTCTGCAAG +
Preference number: 2 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLASSSS*WAQVCK
Trigger: CTTGCAGACTTGGGCCCATCAAGAGCTACTGCTGGC...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCGCCGGTACTGACATTTaGATTTGCAGTGACTTCATG +
Preference number: 2 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSAGTDI*ICSDFM
Trigger: CATGAAGTCACTGCAAATTCAAATGTCAGTACCGGC...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGAGGGTGGGATATGGGTaGTCTGAAAACAGTAAGTGC +
Preference number: 2 (lower is better)
Translates to: LAELTGWVPVSCEEPARMRVGYG*SENSKC
Trigger: GCACTTACTGTTTTCAGAGCACCCATATCCCACCCT...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCCAGTATAAAGCTCTCTaGAAGAAGTCCCTTTACCTG +
Preference number: 2 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSQYKAL*KKSLYL
Trigger: CAGGTAAAGGGACTTCTTTCAGAGAGCTTTATACTG...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp CATTCTTTCTTCACGGCCTACGGCATGACTGGCAGTTCTGCACTGTaGCCCAATCCCGGATCACTAGGAACCAGAAATCCTTATCAATTT +
Preference number: 2 (lower is better)
Translates to: HSFFTAYGMTGSSAL*PNPGSLGTRNPYQF
Trigger: AAATTGATAAGGATTTCTGGTTCCTAGTGATCCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATGCCGTAGGCCGTGAAGAAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACTGGGAGATTACACAATaGGCCTTTCAGCAGTCATCG +
Preference number: 2 (lower is better)
Translates to: EMQATGSARSNQFFAHCHWEITQ*AFQQSS
Trigger: CGATGACTGCTGAAAGGCTCATTGTGTAATCTCCCA...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCACTCGGCCTGTAACATaGCTTTCATACACTGTTTTT +
Preference number: 2 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSTRPVT*LSYTVF
Trigger: AAAAACAGTGTATGAAAGTCATGTTACAGGCCGAGT...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTCTGCTATACGTAATGTaGACAAACATATCACAGCTG +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLLLYVM*TNISQL
Trigger: CAGCTGTGATATGTTTGTGCACATTACGTATAGCAG...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGAAATGTCATTTAGAGTaGAGGTGGCCACCTTCAGTA +
Preference number: 2 (lower is better)
Translates to: LAELTGWVPVSCEEPARMKCHLE*RWPPSV
Trigger: TACTGAAGGTGGCCACCTCCACTCTAAATGACATTT...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTATGTGGTATTCCAGTaGGATTCTATGGTAGGAAAC +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLYVVFQ*DSMVGN
Trigger: GTTTCCTACCATAGAATCCCACTGGAATACCACATA...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGACGGAGACAAATCACTaGAAGCATGTTCAACTCCTT +
Preference number: 2 (lower is better)
Translates to: LAELTGWVPVSCEEPARMTETNH*KHVQLL
Trigger: AAGGAGTTGAACATGCTTCCAGTGATTTGTCTCCGT...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp AGGGGGTGGGACGTGTTACGGTTAGAGCTTGGGAAGAACCAGAATTaGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGAT +
Preference number: 2 (lower is better)
Translates to: RGWDVLRLELGKNQN*RTSSDCDHYEEVFD
Trigger: ATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCAAATTCTGGTTCTTCCCAAGCTCTAACCGTAACACGTCCCACCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp CAGTTTAAGGCCATTTATCATGTGCACTATGTAGTAAACAAAACCTaGTCCCCAGCTCCACCAAGCCACTCCCAAGGGTGGACTGTGAAT +
Preference number: 2 (lower is better)
Translates to: QFKAIYHVHYVVNKT*SPAPPSHSQGWTVN
Trigger: ATTCACAGTCCACCCTTGGGAGTGGCTTGGTGGAGCTGGGGACAAGGTTTTGTTTACTACATAGTGCACATGATAAATGGCCTTAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCAGAAACCGCCACTGCTaGTTGGTCCACTCCTCATAT +
Preference number: 2 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLRNRHC*LVHSSY
Trigger: ATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCT...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAATGTGGTTCCTGGAACTaGCTCACAAAGGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKECGSWN*LTKATG
Trigger: GCCTGTGGCCTTTGTGAGCCAGTTCCAGGAACCACA...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTACCTAGGATATGACTaGACCCTAGATTTACATTAC +
Preference number: 2 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLYLGYD*TLDLHY
Trigger: GTAATGTAAATCTAGGGTCCAGTCATATCCTAGGTA...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGGGCACATATTTCATGTaGATAAAGTTGAGGCGAGAA +
Preference number: 2 (lower is better)
Translates to: LAELTGWVPVSCEEPARMGTYFM*IKLRRE
Trigger: TTCTCGCCTCAACTTTATCCACATGAAATATGTGCC...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAACAGAAGTGTGGTTCCTaGAACTGGCTCACAAAGGCC +
Preference number: 2 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEQKCGS*NWLTKA
Trigger: GGCCTTTGTGAGCCAGTTCCAGGAACCACACTTCTG...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCTCACCCACCAGGAGTaGACATCACTCTACGGAGCA +
Preference number: 2 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKLTHQE*TSLYGA
Trigger: TGCTCCGTAGAGTGATGTGCACTCCTGGTGGGTGAG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCATGACTGGCAGTTCTaGACTGTTGCCCAATCCCGG +
Preference number: 2 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKHDWQF*TVAQSR
Trigger: CCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGCCAGCCCTCTAATTTaGCTCTCTGGCTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYASPLI*LSGWAH
Trigger: ATGTGCCCAGCCAGAGAGCCAAATTAGAGGGCTGGC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp AGAAATCATCTGGTGACCAGAAGAAAATGGAATAAGACCAAACCCTaGGGAGATTACACAATGAGCCTTTCAGCAGTCATCGCTTACTGT +
Preference number: 2 (lower is better)
Translates to: RNHLVTRRKWNKTKP*GDYTMSLSAVIAYC
Trigger: ACAGTAAGCGATGACTGCTGAAAGGCTCATTGTGTAATCTCCCAAGGGTTTGGTCTTATTCCATTTTCTTCTGGTCACCAGATGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCTCTGATGTGATCTGCTaGAAGAGGTCTTATAAACCT +
Preference number: 2 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLSDVIC*KRSYKP
Trigger: AGGTTTATAAGACCTCTTTCAGCAGATCACATCAGA...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGCCTTCTCACCAGGGTaGGATATGGGTGCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYAFSPG*DMGALK
Trigger: TTTCAGAGCACCCATATCCCACCCTGGTGAGAAGGC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCCATTTGAATTTGCAGTaGCTTCATGCAAGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLHLNLQ*LHASQN
Trigger: ATTTTGGCTTGCATGAAGTCACTGCAAATTCAAATG...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGTTTTCCCCCTCTTATTaGGCCAGGGTCTCACTCTGT +
Preference number: 2 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKFSPSY*ARVSLC
Trigger: ACAGAGTGAGACCCTGGCTCAATAAGAGGGGGAAAA...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGGACTCTGAGTTGGCTTaGGTCTCCTCGTGCATAGAA +
Preference number: 2 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKDSELA*VSSCIE
Trigger: TTCTATGCACGAGGAGACTCAAGCCAACTCAGAGTC...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGTCCTGGCTTCTGATGTaGTCTGCTGAAAGAGGTCTT +
Preference number: 2 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKSWLLM*SAERGL
Trigger: AAGACCTCTTTCAGCAGATCACATCAGAAGCCAGGA...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGCTCATTGCATCCTCTaGCTCTTGGGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYAHCIL*LLGSSN
Trigger: ATTGCTTGAACCCAAGAGGCAGAGGATGCAATGAGC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGGTTACGGTTAGAGCTTaGGAAGAACCAGAATTTGCG +
Preference number: 2 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKVTVRA*EEPEFA
Trigger: CGCAAATTCTGGTTCTTCCCAAGCTCTAACCGTAAC...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTCTACTATTATGACTaGCTGGCTATTAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFLYYYD*LAIKTR
Trigger: CCTGGTTTTAATAGCCAGCCAGTCATAATAGTAGAG...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554901.1
3UTR-3UTR GCA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTTCCAAAGCATTTTTaGTTGACTGATTCCTCTACT +
Preference number: 2 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFLPKHF*LTDSST
Trigger: AGTAGAGGAATCAGTCAAGCAAAAATGCTTTGGAAG...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554901.1
3UTR-3UTR CCA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCACTATTATGACTGGCTaGCTATTAAAACCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFTIMTG*LLKPGE
Trigger: TTCACCTGGTTTTAATAGCCAGCCAGTCATAATAGT...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554901.1
3UTR-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATATGATACCTAGGATATaGCTGGACCCTAGATTTACA +
Preference number: 2 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYMIPRI*LDPRFT
Trigger: TGTAAATCTAGGGTCCAGTCATATCCTAGGTATCAT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGACACCCAGGAGAATTTaGATTGAGAATCTTTACCGA +
Preference number: 2 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKTPRRI*IENLYR
Trigger: TCGGTAAAGATTCTCAATCCAAATTCTCCTGGGTGT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp CAGAGTCTTGAATCAGGCCGTGTTAAACTGTGTAAGAAACTACTCTaGTATGCCTCAAATCGACTTATTCTCAATGACTGTATTTATATA +
Preference number: 2 (lower is better)
Translates to: QSLESGRVKLCKKLL*YASNRLILNDCIYI
Trigger: TATATAAATACAGTCATTGAGAATAAGTCGATTTGAGGCATACAAGAGTAGTTTCTTACACAGTTTAACACGGCCTGATTCAAGACTCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 90 bp CTGATGTTCAGCATTGCTTATTTAATTCTTCCAAAGCATTTTTGCTaGACTGATTCCTCTACTATTATGACTGGCTGGCTATTAAAACCA +
Preference number: 2 (lower is better)
Translates to: LMFSIAYLILPKHFC*TDSSTIMTGWLLKP
Trigger: TGGTTTTAATAGCCAGCCAGTCATAATAGTAGAGGAATCAGTCAAGCAAAAATGCTTTGGAAGAATTAAATAAGCAATGCTGAACATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554901.1
3UTR-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATATGATAAATGCTTTCTaGGCAGAGGATTTACCAACA +
Preference number: 2 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYMINAF*AEDLPT
Trigger: TGTTGGTAAATCCTCTGCTCAGAAAGCATTTATCAT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGGATGCCAGATTCAATTaGCTTAGGACATCAAGAATA +
Preference number: 2 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKDARFN*LRTSRI
Trigger: TATTCTTGATGTCCTAAGTCAATTGAATCTGGCATC...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATATCCTGGGTATAATATaGCAAAAGTCCTCTTCACTT +
Preference number: 2 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYILGII*QKSSSL
Trigger: AAGTGAAGAGGACTTTTGGCATATTATACCCAGGAT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATAAGCACTACGATGGCTaGATTCTTCAAACAAATAAG +
Preference number: 2 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYKHYDG*ILQTNK
Trigger: CTTATTTGTTTGAAGAATCCAGCCATCGTAGTGCTT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR GCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGAAACTACTCTTGTATaGCTCAAATCGACTTATTCT +
Preference number: 2 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYETTLV*LKSTYS
Trigger: AGAATAAGTCGATTTGAGGCATACAAGAGTAGTTTC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp TATCCAGGCTGCGGAGCCAGGGCCAGCAGTAGCTCTTaGTGGGCCCAAGTCTGCAAGGTGCTGGGAGAGGGG +
Preference number: 3 (lower is better)
Translates to: YPGCGARASSSS*WAQVCKVLGEG
Trigger: CCCCTCTCCCAGCACCTTGCAGACTTGGGCCCATCAAGAGCTACTGCTGGCCCTGGCTCCGCAGCCTGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp ACCTTGTCCCCAGCTCCACCAAGCCACTCCCAAGGGTaGACTGTGAATGTGACACTTCCAGACTCACCAGAG +
Preference number: 3 (lower is better)
Translates to: TLSPAPPSHSQG*TVNVTLPDSPE
Trigger: CTCTGGTGAGTCTGGAAGTGTCACATTCACAGTCCACCCTTGGGAGTGGCTTGGTGGAGCTGGGGACAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGAGCCAGCCCTCTAATTaGGCTCTCTGGCTGGGCACA +
Preference number: 3 (lower is better)
Translates to: LAELTGWVPVSCEEPARMSQPSN*ALWLGT
Trigger: TGTGCCCAGCCAGAGAGCCAAATTAGAGGGCTGGCT...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp ACTCTACGGAGCAGCTTTGTACCCAACACTCAGATGTaGGAGTGGCCTTCTCACCAGGGTGGGATATGGGTG +
Preference number: 3 (lower is better)
Translates to: TLRSSFVPNTQM*EWPSHQGGIWV
Trigger: CACCCATATCCCACCCTGGTGAGAAGGCCACTCTCACATCTGAGTGTTGGGTACAAAGCTGCTCCGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR GCA 72 bp TTCTTTCTTCACGGCCTACGGCATGACTGGCAGTTCTaGACTGTTGCCCAATCCCGGATCACTAGGAACCAG +
Preference number: 3 (lower is better)
Translates to: FFLHGLRHDWQF*TVAQSRITRNQ
Trigger: CTGGTTCCTAGTGATCCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATGCCGTAGGCCGTGAAGAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCATTCCAAGGTTGGCCTaGAGACCTCTGAGACCTGGA +
Preference number: 3 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSIPRLA*RPLRPG
Trigger: TCCAGGTCTCAGAGGTCTCAAGGCCAACCTTGGAAT...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp ACAGTTACTCACATTCTTTCTTCACGGCCTACGGCATaGCTGGCAGTTCTGCACTGTTGCCCAATCCCGGAT +
Preference number: 3 (lower is better)
Translates to: TVTHILSSRPTA*LAVLHCCPIPD
Trigger: ATCCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATGCCGTAGGCCGTGAAGAAAGAATGTGAGTAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp ATGTTAAGGGTAAAGACACCACGCCACCCTAGTCAGTaGCATGTACTCCACTTTCCAGGAAGACCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: MLRVKTPRHPSQ*HVLHFPGRPGP
Trigger: TGGCCCAGGTCTTCCTGGAAAGTGGAGTACATGTCACTGACTAGGGTGGCGTGGTGTCTTTACCCTTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp TTACTCACATTCTTTCTTCACGGCCTACGGCATGACTaGCAGTTCTGCACTGTTGCCCAATCCCGGATCACT +
Preference number: 3 (lower is better)
Translates to: LLTFFLHGLRHD*QFCTVAQSRIT
Trigger: AGTGATCCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATGCCGTAGGCCGTGAAGAAAGAATGTGAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp CAAGACTGTGTGGACATGCTAGCTGAATTGACAGGGTaGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATG +
Preference number: 3 (lower is better)
Translates to: QDCVDMLAELTG*VPVSCEEPARM
Trigger: CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAGCATGTCCACACAGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACCTCTACGGAGCAGCTTaGTACCCAACACTCAGATGT +
Preference number: 3 (lower is better)
Translates to: EMQATGSARSNQFFAHCHLYGAA*YPTLRC
Trigger: ACATCTGAGTGTTGGGTACAAAGCTGCTCCGTAGAG...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp GGAAGAGCGTTGGAAAAAGCAGACTCTGAGTTGGCTTaGGTCTCCTCGTGCATAGAAGCATTCACTCATCCA +
Preference number: 3 (lower is better)
Translates to: GRALEKADSELA*VSSCIEAFTHP
Trigger: TGGATGAGTGAATGCTTCTATGCACGAGGAGACTCAAGCCAACTCAGAGTCTGCTTTTTCCAACGCTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp ACATGTACTCCACTTTCCAGGAAGACCTGGGCCAAATaGCCAAGCTTTGCAAAAGAAACCTGGGAAGAGCGT +
Preference number: 3 (lower is better)
Translates to: TCTPLSRKTWAK*PSFAKETWEER
Trigger: ACGCTCTTCCCAGGTTTCTTTTGCAAAGCTTGGTCATTTGGCCCAGGTCTTCCTGGAAAGTGGAGTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp TTTAAAAAGGGGGTGGGACGTGTTACGGTTAGAGCTTaGGAAGAACCAGAATTTGCGCACATCCTCAGACTG +
Preference number: 3 (lower is better)
Translates to: FKKGVGRVTVRA*EEPEFAHILRL
Trigger: CAGTCTGAGGATGTGCGCAAATTCTGGTTCTTCCCAAGCTCTAACCGTAACACGTCCCACCCCCTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp CAACACTCAGATGTGAGAGTGGCCTTCTCACCAGGGTaGGATATGGGTGCTCTGAAAACAGTAAGTGCTTTA +
Preference number: 3 (lower is better)
Translates to: QHSDVRVAFSPG*DMGALKTVSAL
Trigger: TAAAGCACTTACTGTTTTCAGAGCACCCATATCCCACCCTGGTGAGAAGGCCACTCTCACATCTGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTAACCGGTATCTGTTaGAATCCTATCAGAGTCTTG +
Preference number: 3 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLLTGIC*NPIRVL
Trigger: CAAGACTCTGATAGGATTCAAACAGATACCGGTTAA...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTGTAAGAAACTACTCTaGTATGCCTCAAATCGACTT +
Preference number: 3 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLCKKLL*YASNRL
Trigger: AAGTCGATTTGAGGCATACAAGAGTAGTTTCTTACA...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp AAGAAACCTGGGAAGAGCGTTGGAAAAAGCAGACTCTaGGTTGGCTTGAGTCTCCTCGTGCATAGAAGCATT +
Preference number: 3 (lower is better)
Translates to: KKPGKSVGKSRL*VGLSLLVHRSI
Trigger: AATGCTTCTATGCACGAGGAGACTCAAGCCAACTCAGAGTCTGCTTTTTCCAACGCTCTTCCCAGGTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGGTAAGTGGAAGGCACTaGCTCCCTAGGGAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKVSGRH*LPREEG
Trigger: GCCCTCCTCCCTAGGGAGCAAGTGCCTTCCACTTAC...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR GCA 72 bp AGGCTAAGTGTACAAACAGAACCAAGGCGTCTGATATaGTATCTTCAAAGCCCAGCACCACCATATATTGGT +
Preference number: 3 (lower is better)
Translates to: RLSVQTEPRRLI*YLQSPAPPYIG
Trigger: ACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCTTGGTTCTGTTTGTACACTTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGGCAGTTCTGCACTGTaGCCCAATCCCGGATCACTA +
Preference number: 3 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYGSSAL*PNPGSL
Trigger: TAGTGATCCGGGATTGGGCAACAGTGCAGAACTGCC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp CTAAGGACTAGTCACACCTCTATCAATCGACTCAGATaGTCAGTTTTGGTAGTCATGGTTAACCGGTATCTG +
Preference number: 3 (lower is better)
Translates to: LRTSHTSINRLR*SVLVVMVNRYL
Trigger: CAGATACCGGTTAACCATGACTACCAAAACTGATCATCTGAGTCGATTGATAGAGGTGTGACTAGTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp TTCCAGTTTACAGGTAACTTGGTCAGGGGAAAAATATaGGTCAACGAAGTAAGATCTCAGCTCTCCCATAAG +
Preference number: 3 (lower is better)
Translates to: FQFTGNLVRGKI*VNEVRSQLSHK
Trigger: CTTATGGGAGAGCTGAGATCTTACTTCGTTGACCCATATTTTTCCCCTGACCAAGTTACCTGTAAACTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp AATTTTGGCAGGCATGTAGAGCATCAAAGGCACTACTaGAGAGTCTTCATTTCCATAGATGATGAAGCCCAT +
Preference number: 3 (lower is better)
Translates to: NFGRHVEHQRHY*RVFISIDDEAH
Trigger: ATGGGCTTCATCATCTATGGAAATGAAGACTCTCCAGTAGTGCCTTTGATGCTCTACATGCCTGCCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556607.1
3UTR-3UTR CAA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAAATAAGACCAAACCCTaGGGAGATTACACAATGAGC +
Preference number: 3 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKENKTKP*GDYTMS
Trigger: GCTCATTGTGTAATCTCCCAAGGGTTTGGTCTTATT...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGGGGAAGAACCAGAATTaGCGCACATCCTCAGACTGT +
Preference number: 3 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKGKNQN*RTSSDC
Trigger: ACAGTCTGAGGATGTGCGCAAATTCTGGTTCTTCCC...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp AATGGAATAAGACCAAACCCTTGGGAGATTACACAATaGGCCTTTCAGCAGTCATCGCTTACTGTTTTTCTT +
Preference number: 3 (lower is better)
Translates to: NGIRPNPWEITQ*AFQQSSLTVFL
Trigger: AAGAAAAACAGTAAGCGATGACTGCTGAAAGGCTCATTGTGTAATCTCCCAAGGGTTTGGTCTTATTCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp TTTTGCTTGACTGATTCCTCTACTATTATGACTGGCTaGCTATTAAAACCAGGTGAAAGTGGACAGAAATCT +
Preference number: 3 (lower is better)
Translates to: FCLTDSSTIMTG*LLKPGESGQKS
Trigger: AGATTTCTGTCCACTTTCACCTGGTTTTAATAGCCAGCCAGTCATAATAGTAGAGGAATCAGTCAAGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
3UTR-3UTR CAA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGAATCCTATCAGAGTCTaGAATCAGGCCGTGTTAAAC +
Preference number: 3 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKNPIRV*NQAVLN
Trigger: GTTTAACACGGCCTGATTCAAGACTCTGATAGGATT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATATGCTTCTGTTCACCTaGATGACTACAGAAGCAAGA +
Preference number: 3 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYMLLFT*MTTEAR
Trigger: TCTTGCTTCTGTAGTCATCAAGGTGAACAGAAGCAT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR-3UTR CAA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCAGCACCACCATATATaGGTTTTCTCTAGAGTTGGA +
Preference number: 3 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKQHHHI*VFSRVG
Trigger: TCCAACTCTAGAGAAAACCAATATATGGTGGTGCTG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR TCA 72 bp TTTCCATTCTGTTCCCAATCCTTCTCCTGTAATACTTaGTGGATACAAAAAGACAAACTGATCCTGGGTATA +
Preference number: 3 (lower is better)
Translates to: FPFCSQSFSCNT*WIQKDKLILGI
Trigger: TATACCCAGGATCAGTTTGTCTTTTTGTATCCATCAAGTATTACAGGAGAAGGATTGGGAACAGAATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CCA 72 bp AGAACCAGCAAGGATGCTTTTTATAATTCCAACCATTaGCTTCACATCACTGAGGTAACAAGACTTAATGTT +
Preference number: 3 (lower is better)
Translates to: RTSKDAFYNSNH*LHITEVTRLNV
Trigger: AACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATAAAAAGCATCCTTGCTGGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR GCA 72 bp TGGATACAAAAAGACAAACTGATCCTGGGTATAATATaGCAAAAGTCCTCTTCACTTAAACTTTGGTTCAAC +
Preference number: 3 (lower is better)
Translates to: WIQKDKLILGII*QKSSSLKLWFN
Trigger: GTTGAACCAAAGTTTAAGTGAAGAGGACTTTTGGCATATTATACCCAGGATCAGTTTGTCTTTTTGTATCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 72 bp CCTCTGAGACCTGGATGGGAAGTAAGTGGAAGGCACTaGCTCCCTAGGGAGGAGGGCCAGGTAAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: PLRPGWEVSGRH*LPREEGQVSIQ
Trigger: CTGGATACTTACCTGGCCCTCCTCCCTAGGGAGCAAGTGCCTTCCACTTACTTCCCATCCAGGTCTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp ACCACAACGACACCGATGTTCCGCTTCAGCATCTCCCGTCCAAAGGCGCCAATTAGGCTGGTGCCATCCTaGCCCATGATGCACTTCATG +
Preference number: 4 (lower is better)
Translates to: TTTTPMFRFSISRPKAPIRLVPS*PMMHFM
Trigger: CATGAAGTGCATCATGGGGCAGGATGGCACCAGCCT...AATTGGCGCCTTTGGACGGGAGATGCTGAAGCGGAACATCGGTGTCGTTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR TCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGTCACGGCCTACGGCATaGCTGGCAGTTCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMSRPTA*LAVLHC
Trigger: ACAGTGCAGAACTGCCAGTCATGCCGTAGGCCGTGA...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCAGGCTGGTGCCATCCTaGCCCATGATGCACTTCATG +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSRLVPS*PMMHFM
Trigger: CATGAAGTGCATCATGGGGCAGGATGGCACCAGCCT...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCCTCACCCACCAGGAGTaGACATCACTCTACGGAGCA +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSLTHQE*TSLYGA
Trigger: TGCTCCGTAGAGTGATGTGCACTCCTGGTGGGTGAG...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCGCCAGCCCTCTAATTTaGCTCTCTGGCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSASPLI*LSGWAH
Trigger: ATGTGCCCAGCCAGAGAGCCAAATTAGAGGGCTGGC...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 72 bp ACCCACCAGGAGTGCACATCACTCTACGGAGCAGCTTaGTACCCAACACTCAGATGTGAGAGTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: THQECTSLYGAA*YPTLRCESGLL
Trigger: GAGAAGGCCACTCTCACATCTGAGTGTTGGGTACAAAGCTGCTCCGTAGAGTGATGTGCACTCCTGGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 72 bp TTCACGGCCTACGGCATGACTGGCAGTTCTGCACTGTaGCCCAATCCCGGATCACTAGGAACCAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: FTAYGMTGSSAL*PNPGSLGTRNP
Trigger: AGGATTTCTGGTTCCTAGTGATCCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATGCCGTAGGCCGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCCATACCCCACATACGTaGGCACAGCAACCAGCATTG +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSHTPHT*AQQPAL
Trigger: CAATGCTGGTTGCTGTGCTCACGTATGTGGGGTATG...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCAGAGGTACCAACCGATaGCGGGAATACTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSRGTNR*REYFSC
Trigger: GCAGCTGAAGTATTCCCGTCATCGGTTGGTACCTCT...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTCGCCACCCTAGTCAGTaGCATGTACTCCACTTTCCA +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLRHPSQ*HVLHFP
Trigger: TGGAAAGTGGAGTACATGTCACTGACTAGGGTGGCG...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTGGTTCCAGTGTCCTGTaGAGAACCAGCAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLGSSVL*RTSKDA
Trigger: AGCATCCTTGCTGGTTCTTCACAGGACACTGGAACC...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGACAATCTCGTCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMTISSH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGACGAGATTGT...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGTCGCCAAGGCTGGAGTaGAGTGGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMSPRLE*SGVILA
Trigger: AGCCAAGATCACACCACTGCACTCCAGCCTTGGCGA...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp CTCCCGTCCAAAGGCGCCAATTTTGGCAGGCATGTAGAGCATCAAAGGCACTACTTTGGTATGAGCTGCTaGCAGGCAAAACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LPSKGANFGRHVEHQRHYFGMSC*QAKPGS
Trigger: AGAGCCAGGTTTTGCCTGTCAGCAGCTCATACCAAA...GTAGTGCCTTTGATGCTCTACATGCCTGCCAAAATTGGCGCCTTTGGACGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR TCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACGCCAGCAGTAGCTCTTaGTGGGCCCAAGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHASSSS*WAQVCK
Trigger: CTTGCAGACTTGGGCCCATCAAGAGCTACTGCTGGC...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCTTTCCTGCCGAGTACTaGACACTCCAGCTCCATACT +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSFPAEY*TLQLHT
Trigger: AGTATGGAGCTGGAGTGTGCAGTACTCGGCAGGAAA...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp ACCACAACGACACCGATGTTCCGCTTCAGCATCTCCCGTCCAAAGGCGCCAATTCAAAGGCGCCAATTTTaGCAGGCATGTAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: TTTTPMFRFSISRPKAPIQRRQF*QACRAS
Trigger: TGATGCTCTACATGCCTGCCAAAATTGGCGCCTTTG...AATTGGCGCCTTTGGACGGGAGATGCTGAAGCGGAACATCGGTGTCGTTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR CCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGCCTCTGAGACCTGGATaGGAAGTAAGTGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMPLRPG*EVSGRH
Trigger: GTGCCTTCCACTTACTTCCCATCCAGGTCTCAGAGG...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACACCGCCACTGCTGCTTaGTCCACTCCTCATATGGGC +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHTATAA*STPHMG
Trigger: GCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGT...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTAGCCACTCCCAAGGGTaGACTGTGAATGTGACACTT +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLSHSQG*TVNVTL
Trigger: AAGTGTCACATTCACAGTCCACCCTTGGGAGTGGCT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACCCATTTTGTGTAACATaGTGGATCTGGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHPFCVT*WIWPAA
Trigger: CGCCGCCGGCCAGATCCATCATGTTACACAAAATGG...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGGGCTCCCAGAACCAGTaGTGCATGATTCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMGSQNQ*CMIQFI
Trigger: GATGAACTGAATCATGCATCACTGGTTCTGGGAGCC...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp CAGGAAATCCAACCACAACGACACCGATGTTCCGCTTCAGCATCTCCCGTCCAACTTTCAGGCGTCTCCTaGAATACCTGGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: QEIQPQRHRCSASASPVQLSGVS*NTWCFQ
Trigger: CTGAAAACACCAGGTATTTCAGGAGACGCCTGAAAG...TTGGACGGGAGATGCTGAAGCGGAACATCGGTGTCGTTGTGGTTGGATTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCCGGGAATACTTCAGCTaGAATAGGTCCCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSREYFS*NRSPTS
Trigger: TGAAGTTGGGGACCTATTGCAGCTGAAGTATTCCCG...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACAGGAGAAACCGCCACTaGTGCTTGGTCCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHRRNRH*CLVHSS
Trigger: TGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCT...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGGCTCATTGCATCCTCTaGCTCTTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMAHCIL*LLGSSN
Trigger: ATTGCTTGAACCCAAGAGGCAGAGGATGCAATGAGC...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTGTTACGGTTAGAGCTTaGGAAGAACCAGAATTTGCG +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLVTVRA*EEPEFA
Trigger: CGCAAATTCTGGTTCTTCCCAAGCTCTAACCGTAAC...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACCAGGAAATCTCTCCATaGAAGCCACTCATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHQEISP*KPLIPL
Trigger: CAGGGGGATGAGTGGCTTCCATGGAGAGATTTCCTG...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCGGCCTACGGCATGACTaGCAGTTCTGCACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLGLRHD*QFCTVA
Trigger: GGCAACAGTGCAGAACTGCCAGTCATGCCGTAGGCC...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAACTGGGCACATGGCAATaGCTAGGGGCCTGGGCACAC +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKELGTWQ*LGAWAH
Trigger: GTGTGCCCAGGCCCCTAGCCATTGCCATGTGCCCAG...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGACCTGGGAAGAGCGTTaGAAAAAGCAGACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMTWEER*KKQTLS
Trigger: ACTCAGAGTCTGCTTTTTCCAACGCTCTTCCCAGGT...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 72 bp AGGGATCATCAAGACTGTGTGGACATGCTAGCTGAATaGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCA +
Preference number: 4 (lower is better)
Translates to: RDHQDCVDMLAE*TGWVPVSCEEP
Trigger: TGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAGCATGTCCACACAGTCTTGATGATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGCCTCATATGGGCTTTTaGCATCTCCTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMPHMGF*HLLAMH
Trigger: ATGCATAGCTAGGAGATGTCAAAAGCCCATATGAGG...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACGACTCTGAGTTGGCTTaGGTCTCCTCGTGCATAGAA +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHDSELA*VSSCIE
Trigger: TTCTATGCACGAGGAGACTCAAGCCAACTCAGAGTC...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCCATGACTGGCAGTTCTaGACTGTTGCCCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLHDWQF*TVAQSR
Trigger: CCGGGATTGGGCAACAGTGCAGAACTGCCAGTCATG...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACCTCAAGCAATCTGCCTaGTTCAGCCTCCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHLKQSA*FSLPKC
Trigger: ACACTTTGGGAGGCTGAAGCAGGCAGATTGCTTGAG...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACGCATTCACTCATCCATaGAGATGGCAACAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHAFTHP*RWQQGR
Trigger: CCTGCCTTGTTGCCATCTGCATGGATGAGTGAATGC...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCTCTCTTAATGTTAGCTaGCTGTTACAGAGAGGGATC +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSSLNVS*LLQRGI
Trigger: GATCCCTCTCTGTAACAGGCAGCTAACATTAAGAGA...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCCACAGCAACCAGCATTaGTGTTTCTTCAAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSHSNQH*CFFKSF
Trigger: GAAGCTTTTGAAGAAACACCAATGCTGGTTGCTGTG...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCTGTGGTTCCTGGAACTaGCTCACAAAGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLCGSWN*LTKATG
Trigger: GCCTGTGGCCTTTGTGAGCCAGTTCCAGGAACCACA...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACGTCTTTCACGTGAGATaGCCACAGAAGTGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHVFHVR*PQKCGS
Trigger: GGAACCACACTTCTGTGGCCATCTCACGTGAAAGAC...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTACGGAGACAAATCACTaGAAGCATGTTCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLTETNH*KHVQLL
Trigger: AAGGAGTTGAACATGCTTCCAGTGATTTGTCTCCGT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp CAGGAAATCCAACCACAACGACACCGATGTTCCGCTTCAGCATCTCCCGTCCAATACACACTCTTTACCTaGAAAGTCACGGTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QEIQPQRHRCSASASPVQYTLFT*KVTVRE
Trigger: TTCTCTCACCGTGACTTTCCAGGTAAAGAGTGTGTA...TTGGACGGGAGATGCTGAAGCGGAACATCGGTGTCGTTGTGGTTGGATTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR TCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTAGCAGGAATGTTCATTaGATTCGTTGCAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLSRNVH*IRCKSH
Trigger: ATGGGATTTGCAACGAATTCAATGAACATTCCTGCT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTATCAATCGACTCAGATaGTCAGTTTTGGTAGTCATG +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLINRLR*SVLVVM
Trigger: CATGACTACCAAAACTGATCATCTGAGTCGATTGAT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACTCCTGGCTTCTGATGTaGTCTGCTGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHSWLLM*SAERGL
Trigger: AAGACCTCTTTCAGCAGATCACATCAGAAGCCAGGA...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTCATCAAAGGCACTACTaGAGAGTCTTCATTTCCATA +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLHQRHY*RVFISI
Trigger: TATGGAAATGAAGACTCTCCAGTAGTGCCTTTGATG...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACCAAAGGCGCCAATTTTaGCAGGCATGTAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHQRRQF*QACRAS
Trigger: TGATGCTCTACATGCCTGCCAAAATTGGCGCCTTTG...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp CTCCCGTCCAAAGGCGCCAATTTTGGCAGGCATGTAGAGCATCAAAGGCACTACTATCAAGTATTTCTTTaGTATGAGCTGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LPSKGANFGRHVEHQRHYYQVFL*YELLTG
Trigger: GCCTGTCAGCAGCTCATACCAAAGAAATACTTGATA...GTAGTGCCTTTGATGCTCTACATGCCTGCCAAAATTGGCGCCTTTGGACGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR CCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCGCCTTCTCACCAGGGTaGGATATGGGTGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLAFSPG*DMGALK
Trigger: TTTCAGAGCACCCATATCCCACCCTGGTGAGAAGGC...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCCACTGCGCCCAGCCATaGGCACATATTTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLHCAQP*AHISCG
Trigger: TCCACATGAAATATGTGCCCATGGCTGGGCGCAGTG...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCTTTGGTATGAGCTGCTaGCAGGCAAAACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLFGMSC*QAKPGS
Trigger: AGAGCCAGGTTTTGCCTGTCAGCAGCTCATACCAAA...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTATGATAAATGCTTTCTaGGCAGAGGATTTACCAACA +
Preference number: 4 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLMINAF*AEDLPT
Trigger: TGTTGGTAAATCCTCTGCTCAGAAAGCATTTATCAT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCGATGCCAGATTCAATTaGCTTAGGACATCAAGAATA +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSDARFN*LRTSRI
Trigger: TATTCTTGATGTCCTAAGTCAATTGAATCTGGCATC...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCTTTTCCCCCTCTTATTaGGCCAGGGTCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLFSPSY*ARVSLC
Trigger: ACAGAGTGAGACCCTGGCTCAATAAGAGGGGGAAAA...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACCTATCAGCTCCTTCTTaGCTCCAATATATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHLSAPS*LQYILQ
Trigger: CTGGAGGATATATTGGAGGCAAGAAGGAGCTGATAG...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AATTTTGGCAGGCATGTAGAGCATCAAAGGCACTACTGGAGAGTCTTCATTTCCATGGAGGTGATGATCTaGTCCACTACAGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: NFGRHVEHQRHYWRVFISMEVMI*STTGGD
Trigger: GTCACCTCCTGTAGTGGAGCAGATCATCACCTCCAT...GGAAATGAAGACTCTCCAGTAGTGCCTTTGATGCTCTACATGCCTGCCAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR GCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAACAATTCTTTGCACACTaGCACTGCCCCTGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEQFFAH*HCPCPS
Trigger: TGAGGGGCAGGGGCAGTGGCAGTGTGCAAAGAATTG...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCGCTAAATATAGTCTCTaGATCTCTCCTTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSAKYSL*ISPWFF
Trigger: AAAGAACCAAGGAGAGATGCAGAGACTATATTTAGC...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCAACCCTACAAATCCTTaGAAAACAACAGTTACTCAC +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSNPTNP*KTTVTH
Trigger: GTGAGTAACTGTTGTTTTGCAAGGATTTGTAGGGTT...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCGATATTTGCATGGGATaGTTCTTAAGTCATCTCAAG +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSDICMG*FLSHLK
Trigger: CTTGAGATGACTTAAGAAGCATCCCATGCAAATATC...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGGGGAATGGCCTGTGTaGTTAGCCAGAGACAGGCTA +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEGEWPV*LARDRL
Trigger: TAGCCTGTCTCTGGCTAACCACACAGGCCATTCCCC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCAAGCACTACGATGGCTaGATTCTTCAAACAAATAAG +
Preference number: 4 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSKHYDG*ILQTNK
Trigger: CTTATTTGTTTGAAGAATCCAGCCATCGTAGTGCTT...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATCTCTGGCTGGGCACATaGCAATGGCTAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYLWLGT*QWLGAW
Trigger: CCAGGCCCCTAGCCATTGCCATGTGCCCAGCCAGAG...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TCCTCTACTATTATGACTGGCTGGCTATTAAAACCAGGTGAAAGTGGACAGAAATCTAATGGTTGCTCCTaGCAGTCTGGCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSTIMTGWLLKPGESGQKSNGCS*QSGSQN
Trigger: GTTCTGGGAGCCAGACTGTCAGGAGCAACCATTAGA...TTTCTGTCCACTTTCACCTGGTTTTAATAGCCAGCCAGTCATAATAGTAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACCAGTATAAAGCTCTCTaGAAGAAGTCCCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHQYKAL*KKSLYL
Trigger: CAGGTAAAGGGACTTCTTTCAGAGAGCTTTATACTG...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCCTCCCAGGCTCAAGTaGTTCTCCCACACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKPPRLK*FSHTGG
Trigger: CCCACCTGTGTGGGAGAATCACTTGAGCCTGGGAGG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAATGTGGACATGCTAGCTaGATTGACAGGGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKECGHAS*IDRVGS
Trigger: GGAACCCACCCTGTCAATTCAGCTAGCATGTCCACA...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCAGGCTGGTGCCATCCTaGCCCATGATGCACTTCATG +
Preference number: 4 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFRLVPS*PMMHFM
Trigger: CATGAAGTGCATCATGGGGCAGGATGGCACCAGCCT...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp AATTTTGGCAGGCATGTAGAGCATCAAAGGCACTACTGGAGAGTCTTCATTTCCCGGGAATACTTCAGCTaGAATAGGTCCCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: NFGRHVEHQRHYWRVFISREYFS*NRSPTS
Trigger: TGAAGTTGGGGACCTATTGCAGCTGAAGTATTCCCG...GGAAATGAAGACTCTCCAGTAGTGCCTTTGATGCTCTACATGCCTGCCAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR GCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCGAAAGCAGTAGGAAATaGAAGCCACAGGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLESSRK*KPQALQ
Trigger: TTGCAGAGCCTGTGGCTTGCATTTCCTACTGCTTTC...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGAGGTGGGATTATAGGTaGCCGCCACCACGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKRWDYR*PPPRPA
Trigger: AGCTGGGCGTGGTGGCGGGCACCTATAATCCCACCT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAATGGCCACAGAAGTGTaGTTCCTGGAACTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEMATEV*FLELAH
Trigger: GTGAGCCAGTTCCAGGAACCACACTTCTGTGGCCAT...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 72 bp GACGTGTTACGGTTAGAGCTTGGGAAGAACCAGAATTaGCGCACATCCTCAGACTGTGACCATTATGAAGAA +
Preference number: 4 (lower is better)
Translates to: DVLRLELGKNQN*RTSSDCDHYEE
Trigger: TTCTTCATAATGGTCACAGTCTGAGGATGTGCGCAAATTCTGGTTCTTCCCAAGCTCTAACCGTAACACGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp GCCAATTTTGGCAGGCATGTAGAGCATCAAAGGCACTACTGGAGAGTCTTCATTAGTATTTCTTTGGTATaGGCTGCTGACAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: ANFGRHVEHQRHYWRVFISISLV*AADRQN
Trigger: GTTTTGCCTGTCAGCAGCTCATACCAAAGAAATACT...AATGAAGACTCTCCAGTAGTGCCTTTGATGCTCTACATGCCTGCCAAAATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR GCA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGTTAGTAAATAGTAACTaGAGTGCAAAAGCTATGTGG +
Preference number: 4 (lower is better)
Translates to: LAELTGWVPVSCEEPARMLVNSN*SAKAMW
Trigger: CCACATAGCTTTTGCACTGCAGTTACTATTTACTAA...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAAGAAACCGCCACTGCTaGTTGGTCCACTCCTCATAT +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKERNRHC*LVHSSY
Trigger: ATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCT...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACTATCAAGTATTTCTTTaGTATGAGCTGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHYQVFL*YELLTG
Trigger: GCCTGTCAGCAGCTCATACCAAAGAAATACTTGATA...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACTTTAATGTATTAAGATaGCTGCTGGGCACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHFNVLR*LLGTEH
Trigger: ATGCTCAGTGCCCAGCAGCCATCTTAATACATTAAA...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAAAGCAGACTCTGAGTTaGCTTGAGTCTCCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEKQTLS*LESPRA
Trigger: TGCACGAGGAGACTCAAGCCAACTCAGAGTCTGCTT...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTCATACCCCACATACGTaGGCACAGCAACCAGCATTG +
Preference number: 4 (lower is better)
Translates to: SWTHKILLELSVRISTIPHTPHT*AQQPAL
Trigger: CAATGCTGGTTGCTGTGCTCACGTATGTGGGGTATG...AGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGGCTGCTTCTTGACATaGTCCAGTATTCCGTGCAAA +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEGCFLT*SSIPCK
Trigger: TTTGCACGGAATACTGGATCATGTCAAGAAGCAGCC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATCCCAACACTCAGATGTaGGAGTGGCCTTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYPNTQM*EWPSHQ
Trigger: CTGGTGAGAAGGCCACTCTCACATCTGAGTGTTGGG...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAAGGGTGGGATATGGGTaGTCTGAAAACAGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKERVGYG*SENSKC
Trigger: GCACTTACTGTTTTCAGAGCACCCATATCCCACCCT...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTGCTCCTGACAGTCTaGCTCCCAGAACCAGTGATG +
Preference number: 4 (lower is better)
Translates to: GLIKFYWNSLYGYLQFLMLLLTV*LPEPVM
Trigger: CATCACTGGTTCTGGGAGCCAGACTGTCAGGAGCAA...CATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGAGGTGACAATGACGTaGCATACACTGCACTATGAG +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEEVTMT*HTLHYE
Trigger: CTCATAGTGCAGTGTATGCCACGTCATTGTCACCTC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp GGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGGGCTCCCAGAACCAGTaGTGCATGATTCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: GLIKFYWNSLYGYLQFLMGSQNQ*CMIQFI
Trigger: GATGAACTGAATCATGCATCACTGGTTCTGGGAGCC...CATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATTCTAATGGTTGCTCCTaGCAGTCTGGCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYSNGCS*QSGSQN
Trigger: GTTCTGGGAGCCAGACTGTCAGGAGCAACCATTAGA...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCACTCGGCCTGTAACATaGCTTTCATACACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLTRPVT*LSYTVF
Trigger: AAAAACAGTGTATGAAAGTCATGTTACAGGCCGAGT...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATCTGGTCTTGAATTCCTaGCCTCAAGTGAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYLVLNS*PQVSHL
Trigger: CAGGTGGCTCACTTGAGGTCAGGAATTCAAGACCAG...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGCCGGTACTGACATTTaGATTTGCAGTGACTTCATG +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEAGTDI*ICSDFM
Trigger: CATGAAGTCACTGCAAATTCAAATGTCAGTACCGGC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTATGGAGGTGATGATCTaGTCCACTACAGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SWTHKILLELSVRISTIPMEVMI*STTGGD
Trigger: GTCACCTCCTGTAGTGGAGCAGATCATCACCTCCAT...AGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACGAAACTACTCTTGTATaGCTCAAATCGACTTATTCT +
Preference number: 4 (lower is better)
Translates to: EMQATGSARSNQFFAHCHETTLV*LKSTYS
Trigger: AGAATAAGTCGATTTGAGGCATACAAGAGTAGTTTC...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGGGGTCTTGCTGTGTTaGCCAGGCTACGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYGVLLC*PGYAQI
Trigger: AATTTGAGCGTAGCCTGGGCAACACAGCAAGACCCC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGGTACTGCTCTTATCTaGACCTTTCATTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEGTALI*TFHSSS
Trigger: GGAGCTTGAATGAAAGGTGCAGATAAGAGCAGTACC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTCAACATGGACCAGACTaGTTAGAAAAGGGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SWTHKILLELSVRISTIPQHGPD*LEKGSW
Trigger: CCACGACCCCTTTTCTAAGCAGTCTGGTCCATGTTG...AGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CCA 90 bp TCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTACTCCTCAAGGACTTTaGCGGCTGCTTCTTGACATG +
Preference number: 4 (lower is better)
Translates to: SWTHKILLELSVRISTIPTPQGL*RLLLDM
Trigger: CATGTCAAGAAGCAGCCGCCAAAGTCCTTGAGGAGT...AGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGTTGCTCCTGACAGTCTaGCTCCCAGAACCAGTGATG +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKLLLTV*LPEPVM
Trigger: CATCACTGGTTCTGGGAGCCAGACTGTCAGGAGCAA...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCGAGGTGACAATGACGTaGCATACACTGCACTATGAG +
Preference number: 4 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFEVTMT*HTLHYE
Trigger: CTCATAGTGCAGTGTATGCCACGTCATTGTCACCTC...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CCA 90 bp AATTTTGGCAGGCATGTAGAGCATCAAAGGCACTACTGGAGAGTCTTCATTTCCCATCAAAGGCACTACTaGAGAGTCTTCATTTCCATA +
Preference number: 4 (lower is better)
Translates to: NFGRHVEHQRHYWRVFISHQRHY*RVFISI
Trigger: TATGGAAATGAAGACTCTCCAGTAGTGCCTTTGATG...GGAAATGAAGACTCTCCAGTAGTGCCTTTGATGCTCTACATGCCTGCCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556607.1
CDS-3UTR CCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCAGAAGTGTGGTTCCTaGAACTGGCTCACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKQKCGS*NWLTKA
Trigger: GGCCTTTGTGAGCCAGTTCCAGGAACCACACTTCTG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATAGCCTACCAAGTAGGTaGGATTATAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYSLPSR*DYRCPP
Trigger: TGGCGGGCACCTATAATCCCACCTACTTGGTAGGCT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATCAGGCTAGAGTGCAGTaGCACAATCTCGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYQARVQ*HNLVSL
Trigger: CAGTGAGACGAGATTGTGCCACTGCACTCTAGCCTG...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGATATCCAAAGAGGGTaGGTACGCCATACCCCACAT +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYDIQRG*VRHTPH
Trigger: ATGTGGGGTATGGCGTACTCACCCTCTTTGGATATC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp CATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTCAGGATATCCAAAGAGGGTaGGTACGCCATACCCCACAT +
Preference number: 4 (lower is better)
Translates to: HKILLELSVRISTIPDVQDIQRG*VRHTPH
Trigger: ATGTGGGGTATGGCGTACTCACCCTCTTTGGATATC...CTGAACATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp GGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGGGCTGCTTCTTGACATaGTCCAGTATTCCGTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLIKFYWNSLYGYLQFLMGCFLT*SSIPCK
Trigger: TTTGCACGGAATACTGGATCATGTCAAGAAGCAGCC...CATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGGAAAAAGCAGACTCTaGGTTGGCTTGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYGKSRL*VGLSLL
Trigger: GAGGAGACTCAAGCCAACTCAGAGTCTGCTTTTTCC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCGATATTAAGGAAGCATaGTCCATAGGCACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFDIKEA*SIGTGD
Trigger: GTCACCAGTGCCTATGGATCATGCTTCCTTAATATC...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp CATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTCAGTTTCCTGCCGAGTACTaGACACTCCAGCTCCATACT +
Preference number: 4 (lower is better)
Translates to: HKILLELSVRISTIPDVQFPAEY*TLQLHT
Trigger: AGTATGGAGCTGGAGTGTGCAGTACTCGGCAGGAAA...CTGAACATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTATCAGCTCCTTCTTaGCTCCAATATATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFLSAPS*LQYILQ
Trigger: CTGGAGGATATATTGGAGGCAAGAAGGAGCTGATAG...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGATGGAGGTGATGATCTaGTCCACTACAGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKMEVMI*STTGGD
Trigger: GTCACCTCCTGTAGTGGAGCAGATCATCACCTCCAT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAATCTCCCATAAGCTATTaGTCTCTTCTTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKESPISY*SLLLFP
Trigger: GGGAAAGAGAAGAAGAGAGCAATAGCTTATGGGAGA...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAATCACAGCATCCCCTTaGAAATTCCAGTTTACAGGT +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEITASP*KFQFTG
Trigger: ACCTGTAAACTGGAATTTGCAAGGGGATGCTGTGAT...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATACTCCTCAAGGACTTTaGCGGCTGCTTCTTGACATG +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYTPQGL*RLLLDM
Trigger: CATGTCAAGAAGCAGCCGCCAAAGTCCTTGAGGAGT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCTACCTAGGATATGACTaGACCCTAGATTTACATTAC +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLYLGYD*TLDLHY
Trigger: GTAATGTAAATCTAGGGTCCAGTCATATCCTAGGTA...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGCTGAATTGACAGGGTaGGTTCCAGTGTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYAELTG*VPVSCE
Trigger: TTCACAGGACACTGGAACCCACCCTGTCAATTCAGC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATCTTTCAGGCGTCTCCTaGAATACCTGGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYLSGVS*NTWCFQ
Trigger: CTGAAAACACCAGGTATTTCAGGAGACGCCTGAAAG...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGTGGGAGATTACACAATaGGCCTTTCAGCAGTCATCG +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKWEITQ*AFQQSS
Trigger: CGATGACTGCTGAAAGGCTCATTGTGTAATCTCCCA...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCAATGAATCCTGCATATaGGGTATGAGACCAACATGG +
Preference number: 4 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFNESCI*GMRPTW
Trigger: CCATGTTGGTCTCATACCTCATATGCAGGATTCATT...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCTTCTTCTCTTTCTGTTaGATGGTGACACTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLFFSFC*MVTLFN
Trigger: ATTGAAAAGTGTCACCATGCAACAGAAAGAGAAGAA...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGAGGTTTCCAATTTCCTaGCGAGTACTGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKRFPIS*RVLHTP
Trigger: TGGAGTGTGCAGTACTCGGCAGGAAATTGGAAACCT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGAATCAGGCAACCTTTaGCAACAAGAGCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: SWTHKILLELSVRISTIPESGNL*QQEQEC
Trigger: ACATTCCTGCTCTTGTTGGCAAAGGTTGCCTGATTC...AGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCCAAGGCGTCTGATATaGTATCTTCAAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKPRRLI*YLQSPA
Trigger: TGCTGGGCTTTGAAGATAGCATATCAGACGCCTTGG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCAAGCTCCCCTCAAGTaGTCCAAAAGAACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKQAPLK*SKRTEL
Trigger: AAGCTCTGTTCTTTTGGAGCACTTGAGGGGAGCTTG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
3UTR CAA 72 bp TGGTTAACCGGTATCTGTTTGAATCCTATCAGAGTCTaGAATCAGGCCGTGTTAAACTGTGTAAGAAACTAC +
Preference number: 4 (lower is better)
Translates to: WLTGICLNPIRV*NQAVLNCVRNY
Trigger: GTAGTTTCTTACACAGTTTAACACGGCCTGATTCAAGACTCTGATAGGATTCAAACAGATACCGGTTAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGGAATCAGGCAACCTTTaGCAACAAGAGCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKESGNL*QQEQEC
Trigger: ACATTCCTGCTCTTGTTGGCAAAGGTTGCCTGATTC...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAAGCTTCTCTAGGCTTTaGATATTGTTGTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKESFSRL*ILLCLK
Trigger: CTTCAAACACAACAATATGCAAAGCCTAGAGAAGCT...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp GGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGGGTATGAGACCAACATaGACCAGACTGCTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLIKFYWNSLYGYLQFLMGMRPT*TRLLRK
Trigger: TTTTCTAAGCAGTCTGGTCCATGTTGGTCTCATACC...CATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
3UTR CAA 72 bp GAATCAGGCCGTGTTAAACTGTGTAAGAAACTACTCTaGTATGCCTCAAATCGACTTATTCTCAATGACTGT +
Preference number: 4 (lower is better)
Translates to: ESGRVKLCKKLL*YASNRLILNDC
Trigger: ACAGTCATTGAGAATAAGTCGATTTGAGGCATACAAGAGTAGTTTCTTACACAGTTTAACACGGCCTGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGAGAACCAGTGATGCATaGTTCAGTTCATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKRTSDA*FSSSLR
Trigger: TCTGAGTGATGAACTGAATCATGCATCACTGGTTCT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp CATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTCAGAGAACCAGTGATGCATaGTTCAGTTCATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: HKILLELSVRISTIPDVQRTSDA*FSSSLR
Trigger: TCTGAGTGATGAACTGAATCATGCATCACTGGTTCT...CTGAACATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATAGTATTTCTTTGGTATaGGCTGCTGACAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYSISLV*AADRQN
Trigger: GTTTTGCCTGTCAGCAGCTCATACCAAAGAAATACT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp CATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTCAGATCCATAGGCACTGGTaGCTAAATACAGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: HKILLELSVRISTIPDVQIHRHW*LNTGDK
Trigger: TTTATCCCCTGTATTTAGTCACCAGTGCCTATGGAT...CTGAACATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CCA 90 bp GGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGCTCTACTATTATGACTaGCTGGCTATTAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: GLIKFYWNSLYGYLQFLMLYYYD*LAIKTR
Trigger: CCTGGTTTTAATAGCCAGCCAGTCATAATAGTAGAG...CATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp CATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTCAGAGCAGGAATGTTCATTaGATTCGTTGCAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: HKILLELSVRISTIPDVQSRNVH*IRCKSH
Trigger: ATGGGATTTGCAACGAATTCAATGAACATTCCTGCT...CTGAACATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGATGATACCTAGGATATaGCTGGACCCTAGATTTACA +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKMIPRI*LDPRFT
Trigger: TGTAAATCTAGGGTCCAGTCATATCCTAGGTATCAT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGTCTGATGTGATCTGCTaGAAGAGGTCTTATAAACCT +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKSDVIC*KRSYKP
Trigger: AGGTTTATAAGACCTCTTTCAGCAGATCACATCAGA...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATATCCTTGCCCTATCATaGATGTTTACGATAGTGACT +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYILALS*MFTIVT
Trigger: AGTCACTATCGTAAACATTCATGATAGGGCAAGGAT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp GGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGAGCTTCTCTAGGCTTTaGATATTGTTGTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GLIKFYWNSLYGYLQFLMSFSRL*ILLCLK
Trigger: CTTCAAACACAACAATATGCAAAGCCTAGAGAAGCT...CATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCTGCTATACGTAATGTaGACAAACATATCACAGCTG +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKLLYVM*TNISQL
Trigger: CAGCTGTGATATGTTTGTGCACATTACGTATAGCAG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATAAAGTACAGAGGTCCTaGATAGATCACAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYKVQRS*IDHRRF
Trigger: AAATCTCCTGTGATCTATGCAGGACCTCTGTACTTT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATACACCCAGGAGAATTTaGATTGAGAATCTTTACCGA +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYTPRRI*IENLYR
Trigger: TCGGTAAAGATTCTCAATCCAAATTCTCCTGGGTGT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATTATGTGGTATTCCAGTaGGATTCTATGGTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYYVVFQ*DSMVGN
Trigger: GTTTCCTACCATAGAATCCCACTGGAATACCACATA...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGGCACATATTTCATGTaGATAAAGTTGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYGTYFM*IKLRRE
Trigger: TTCTCGCCTCAACTTTATCCACATGAAATATGTGCC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGTCAGGGGAAAAATATaGGTCAACGAAGTAAGATCT +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYVRGKI*VNEVRS
Trigger: AGATCTTACTTCGTTGACCCATATTTTTCCCCTGAC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp TCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTACTATTATGACTGGCTaGCTATTAAAACCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SWTHKILLELSVRISTIPTIMTG*LLKPGE
Trigger: TTCACCTGGTTTTAATAGCCAGCCAGTCATAATAGT...AGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCATTTGAATTTGCAGTaGCTTCATGCAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKHLNLQ*LHASQN
Trigger: ATTTTGGCTTGCATGAAGTCACTGCAAATTCAAATG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR TCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGCAGGGTAAGAGAGAGTaGCATTTTAACACATTACTA +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKQGKRE*HFNTLL
Trigger: TAGTAATGTGTTAAAATGTCACTCTCTCTTACCCTG...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp GGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGATCCAGATACAAGTATaGCTTGTATTTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GLIKFYWNSLYGYLQFLMIQIQV*LVFLLE
Trigger: CTCAAGAAGAAATACAAGGCATACTTGTATCTGGAT...CATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATATAAGATCAAGGTACTaGTCTTATCTGCACCTTTCA +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYIRSRY*SYLHLS
Trigger: TGAAAGGTGCAGATAAGAGCAGTACCTTGATCTTAT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp CATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTCAGCTTCCAAAGCATTTTTaGTTGACTGATTCCTCTACT +
Preference number: 4 (lower is better)
Translates to: HKILLELSVRISTIPDVQLPKHF*LTDSST
Trigger: AGTAGAGGAATCAGTCAAGCAAAAATGCTTTGGAAG...CTGAACATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATACTAAAGCACTACGATaGCTGGATTCTTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYTKALR*LDSSNK
Trigger: TTTGTTTGAAGAATCCAGCCATCGTAGTGCTTTAGT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CCA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGAAGCAAAGGGATCATTaGCTAGCACTAGCATTTATT +
Preference number: 4 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKKQRDH*LALAFI
Trigger: AATAAATGCTAGTGCTAGCCAATGATCCCTTTGCTT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR GCA 90 bp CATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTCAGTTCTTCTCTTTCTGTTaGATGGTGACACTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: HKILLELSVRISTIPDVQFFSFC*MVTLFN
Trigger: ATTGAAAAGTGTCACCATGCAACAGAAAGAGAAGAA...CTGAACATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR GCA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATATCCAGATACAAGTATaGCTTGTATTTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYIQIQV*LVFLLE
Trigger: CTCAAGAAGAAATACAAGGCATACTTGTATCTGGAT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCTGGGGTCTTGCTGTGTaGCCCAGGCTACGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSWGLAV*PRLRSN
Trigger: ATTTGAGCGTAGCCTGGGCAACACAGCAAGACCCCA...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCTGTGATCTTGGCTCATaGCATCCTCTGCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSCDLGS*HPLPLG
Trigger: CCCAAGAGGCAGAGGATGCAATGAGCCAAGATCACA...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTGACATGCTAGCTGAATaGACAGGGTGGGTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLDMLAE*TGWVPV
Trigger: CACTGGAACCCACCCTGTCAATTCAGCTAGCATGTC...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTCTCTACGGAGCAGCTTaGTACCCAACACTCAGATGT +
Preference number: 5 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLLYGAA*YPTLRC
Trigger: ACATCTGAGTGTTGGGTACAAAGCTGCTCCGTAGAG...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACAACCGCCACTGCTGCTaGGTCCACTCCTCATATGGG +
Preference number: 5 (lower is better)
Translates to: EMQATGSARSNQFFAHCHNRHCC*VHSSYG
Trigger: CCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTAGAATCAGGCAACCTTaGCCAACAAGAGCAGGAATG +
Preference number: 5 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLRIRQP*PTRAGM
Trigger: CATTCCTGCTCTTGTTGGCAAAGGTTGCCTGATTCT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACGGCAGTTCTGCACTGTaGCCCAATCCCGGATCACTA +
Preference number: 5 (lower is better)
Translates to: EMQATGSARSNQFFAHCHGSSAL*PNPGSL
Trigger: TAGTGATCCGGGATTGGGCAACAGTGCAGAACTGCC...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTATTGGCCGATTCCAGTaGTCTCTTATCCTCATGTAC +
Preference number: 5 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLIGRFQ*SLILMY
Trigger: GTACATGAGGATAAGAGACAACTGGAATCGGCCAAT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCTCCTCATATGGGCTTTaGACATCTCCTAGCTATGCA +
Preference number: 5 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSSSYGL*TSPSYA
Trigger: TGCATAGCTAGGAGATGTCAAAAGCCCATATGAGGA...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCAGCCAGCCCTCTAATTaGGCTCTCTGGCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLSQPSN*ALWLGT
Trigger: TGTGCCCAGCCAGAGAGCCAAATTAGAGGGCTGGCT...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGCATCACAGCATCCCCTaGCAAATTCCAGTTTACAGG +
Preference number: 5 (lower is better)
Translates to: LAELTGWVPVSCEEPARMHHSIP*QIPVYR
Trigger: CCTGTAAACTGGAATTTGCAAGGGGATGCTGTGATG...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTTTGACATCTCCTAGCTGTTCATTGAATTCGTaGCAAATCCCATGCCATACG +
Preference number: 5 (lower is better)
Translates to: NRHCCLVHSSYGLLTSPSCSLNS*QIPCHT
Trigger: CGTATGGCATGGGATTTGCAACGAATTCAATGAACA...GCTAGGAGATGTCAAAAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AAAGATGCGAGGAGAAACCGCCACTGCTGCTTGGTCCACTCCTCATATGGGCTTAATCCTATCAGAGTCTaGAATCAGGCCGTGTTAAAC +
Preference number: 5 (lower is better)
Translates to: KDARRNRHCCLVHSSYGLNPIRV*NQAVLN
Trigger: GTTTAACACGGCCTGATTCAAGACTCTGATAGGATT...AAGCCCATATGAGGAGTGGACCAAGCAGCAGTGGCGGTTTCTCCTCGCATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS TCA 90 bp TCCAGCTCCATACTCCTCAAGGACTTTGGCGGCTGCTTCTTGACATaGTCCAGTATTCCGTGCAAATCCAAGATAGTTGTAGGAACCCAT +
Preference number: 5 (lower is better)
Translates to: SSSILLKDFGGCFLT*SSIPCKSKIVVGTH
Trigger: ATGGGTTCCTACAACTATCTTGGATTTGCACGGAATACTGGATCATGTCAAGAAGCAGCCGCCAAAGTCCTTGAGGAGTATGGAGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216484.7
ENST00000554901.1
CDS-3UTR CAA 90 bp CTAGCTGAATTGACAGGGTGGGTTCCAGTGTCCTGTGAAGAACCAGCAAGGATGTCTAGTTCTTCATGCTaGTCCAGGTTTCCAATTTCC +
Preference number: 5 (lower is better)
Translates to: LAELTGWVPVSCEEPARMSSSSC*SRFPIS
Trigger: GGAAATTGGAAACCTGGACAAGCATGAAGAACTAGA...CATCCTTGCTGGTTCTTCACAGGACACTGGAACCCACCCTGTCAATTCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACCTTAACCTAGCCCCTTaGGTTTCCTCCCTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: EMQATGSARSNQFFAHCHLNLAP*VSSLEK
Trigger: CTTTTCTAGGGAGGAAACCAAAGGGGCTAGGTTAAG...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS TCA 90 bp ACTCAGAATCAGGCAACCTTTGCCAACAAGAGCAGGAATGTTCATTaGATTCGTTGCAAATCCCATGCCATACGCCATAGCAGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: TQNQATFANKSRNVH*IRCKSHAIRHSSFY
Trigger: GTAGAAGCTGCTATGGCGTATGGCATGGGATTTGCAACGAATTCAATGAACATTCCTGCTCTTGTTGGCAAAGGTTGCCTGATTCTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216484.7
ENST00000554901.1
CDS-3UTR CAA 90 bp GAAATGCAAGCCACAGGCTCTGCAAGGAGTAATCAATTCTTTGCACACTGCCACTTAACCGGTATCTGTTaGAATCCTATCAGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: EMQATGSARSNQFFAHCHLTGIC*NPIRVL
Trigger: CAAGACTCTGATAGGATTCAAACAGATACCGGTTAA...GTGGCAGTGTGCAAAGAATTGATTACTCCTTGCAGAGCCTGTGGCTTGCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGTAGTAAACAAAACCTaGTCCCCAGCTCCACCAAGC +
Preference number: 5 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEVVNKT*SPAPPS
Trigger: GCTTGGTGGAGCTGGGGACAAGGTTTTGTTTACTAC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCCCAAATGACCAAGCTTaGCAAAAGAAACCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLPNDQA*QKKPGK
Trigger: CTTCCCAGGTTTCTTTTGCAAAGCTTGGTCATTTGG...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGCACAGCAACCAGCATaGGTGTTTCTTCAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEAQQPA*VFLQKL
Trigger: AAGCTTTTGAAGAAACACCAATGCTGGTTGCTGTGC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp TCCTCTACTATTATGACTGGCTGGCTATTAAAACCAGGTGAAAGTGGACAGAAACTACTCCTAAGAACCTaGCTACAAGCTCCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: SSTIMTGWLLKPGESGQKLLLRT*LQAPLV
Trigger: AACTAGAGGAGCTTGTAGCAAGGTTCTTAGGAGTAG...TTTCTGTCCACTTTCACCTGGTTTTAATAGCCAGCCAGTCATAATAGTAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CAA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGCCTTGTATTTCTTCTaGAGGGCAATCACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEALYFF*RAITSG
Trigger: TCCTGAAGTGATTGCCCTCAAGAAGAAATACAAGGC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGATTCCAAGGTTGGCCTaGAGACCTCTGAGACCTGGA +
Preference number: 5 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKIPRLA*RPLRPG
Trigger: TCCAGGTCTCAGAGGTCTCAAGGCCAACCTTGGAAT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AGGCGTCTGATATGCTATCTTCAAAGCCCAGCACCACCATATATTGGTTTTCTCATGAATGTGGACAGTTaGAAGGAAAACCACTACTCT +
Preference number: 5 (lower is better)
Translates to: RRLICYLQSPAPPYIGFLMNVDS*KENHYS
Trigger: AGAGTAGTGGTTTTCCTTCAAACTGTCCACATTCAT...GAGAAAACCAATATATGGTGGTGCTGGGCTTTGAAGATAGCATATCAGACGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCATTGGCCGATTCCAGTaGTCTCTTATCCTCATGTAC +
Preference number: 5 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFIGRFQ*SLILMY
Trigger: GTACATGAGGATAAGAGACAACTGGAATCGGCCAAT...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CAA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAGAGCAGGAATGTTCATaGAATTCGTTGCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEEQECS*NSLQIP
Trigger: TGGGATTTGCAACGAATTCAATGAACATTCCTGCTC...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp GGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGAGAATCAGGCAACCTTaGCCAACAAGAGCAGGAATG +
Preference number: 5 (lower is better)
Translates to: GLIKFYWNSLYGYLQFLMRIRQP*PTRAGM
Trigger: CATTCCTGCTCTTGTTGGCAAAGGTTGCCTGATTCT...CATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CAA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGGGAGTAATCAATTCTTaGCACACTGCCACTGCCCCT +
Preference number: 5 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKGVINS*HTATAP
Trigger: AGGGGCAGTGGCAGTGTGCAAAGAATTGATTACTCC...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAAATGCTTCTGTTCACCTaGATGACTACAGAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEMLLFT*MTTEAR
Trigger: TCTTGCTTCTGTAGTCATCAAGGTGAACAGAAGCAT...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp TGCGCACATCCTCAGACTGTGACCATTATGAAGAAGTATTTGATGGTAAAGGAACAGCACCACCATATATaGGTTTTCTCTAGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: CAHPQTVTIMKKYLMVKEQHHHI*VFSRVG
Trigger: TCCAACTCTAGAGAAAACCAATATATGGTGGTGCTG...TTCCTTTACCATCAAATACTTCTTCATAATGGTCACAGTCTGAGGATGTGCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATAACCTGGGAAGAGCGTaGGAAAAAGCAGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYNLGRA*EKADSE
Trigger: CTCAGAGTCTGCTTTTTCCAACGCTCTTCCCAGGTT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp GGTCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCTGTTCATTGAATTCGTaGCAAATCCCATGCCATACG +
Preference number: 5 (lower is better)
Translates to: GRGLIKFYWNSLYGYLQFCSLNS*QIPCHT
Trigger: CGTATGGCATGGGATTTGCAACGAATTCAATGAACA...GAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CAA 90 bp TCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTTCTAGTTCTTCATGCTaGTCCAGGTTTCCAATTTCC +
Preference number: 5 (lower is better)
Translates to: SWTHKILLELSVRISTIPSSSSC*SRFPIS
Trigger: GGAAATTGGAAACCTGGACAAGCATGAAGAACTAGA...AGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CAA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATCTACTCCTAAGAACCTaGCTACAAGCTCCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYLLLRT*LQAPLV
Trigger: AACTAGAGGAGCTTGTAGCAAGGTTCTTAGGAGTAG...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp TCGTGGACTCATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGAGCAGGAATGTTCATaGAATTCGTTGCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: SWTHKILLELSVRISTIPEQECS*NSLQIP
Trigger: TGGGATTTGCAACGAATTCAATGAACATTCCTGCTC...AGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATGAGTCCACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CAA 90 bp CATAAAATTTTACTGGAACTCTCTGTACGGATATCTACAATTCCTGATGTTCAGGCCTTGTATTTCTTCTaGAGGGCAATCACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: HKILLELSVRISTIPDVQALYFF*RAITSG
Trigger: TCCTGAAGTGATTGCCCTCAAGAAGAAATACAAGGC...CTGAACATCAGGAATTGTAGATATCCGTACAGAGAGTTCCAGTAAAATTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554901.1
CDS-3UTR CAA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGTCAACTCCTTGGTGTTaGAAGAGGCATGACACAAAC +
Preference number: 5 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKSTPWC*KRHDTN
Trigger: GTTTGTGTCATGCCTCTTCAAACACCAAGGAGTTGA...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATAATAAGACCAAACCCTaGGGAGATTACACAATGAGC +
Preference number: 5 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYNKTKP*GDYTMS
Trigger: GCTCATTGTGTAATCTCCCAAGGGTTTGGTCTTATT...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATCAAATAAGCAGTACTTaGGGGGTTATGGAGACTAGA +
Preference number: 5 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYQISST*GVMETR
Trigger: TCTAGTCTCCATAACCCCCAAAGTACTGCTTATTTG...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp TATAATTCCAACCATTGGCTTCACATCACTGAGGTAACAAGACTTAATGTTAAGAAAGCAAAGGGATCATaGGCTAGCACTAGCATTTAT +
Preference number: 5 (lower is better)
Translates to: YNSNHWLHITEVTRLNVKKAKGS*ASTSIY
Trigger: ATAAATGCTAGTGCTAGCCAATGATCCCTTTGCTTT...CTTAACATTAAGTCTTGTTACCTCAGTGATGTGAAGCCAATGGTTGGAATTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATGGCAAAACAAGATATTaGCATGGGATGCTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYGKTRY*HGMLLK
Trigger: CTTAAGAAGCATCCCATGCAAATATCTTGTTTTGCC...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS-3UTR CAA 90 bp AACTTATCCTACCAGAAAGAATCACAGTTTAAGGCCATTTATCATGTGCACTATTGTAAGAAACTACTCTaGTATGCCTCAAATCGACTT +
Preference number: 5 (lower is better)
Translates to: NLSYQKESQFKAIYHVHYCKKLL*YASNRL
Trigger: AAGTCGATTTGAGGCATACAAGAGTAGTTTCTTACA...ATAGTGCACATGATAAATGGCCTTAAACTGTGATTCTTTCTGGTAGGATAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7
CDS GCA 72 bp TCCTGCCCCATGATGCACTTCATGGAGGTGATGATCTaGTCCACTACAGGAGGTGACAATGACGTGGCATAC +
Preference number: 6 (lower is better)
Translates to: SCPMMHFMEVMI*STTGGDNDVAY
Trigger: GTATGCCACGTCATTGTCACCTCCTGTAGTGGAGCAGATCATCACCTCCATGAAGTGCATCATGGGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216484.7
ENST00000554901.1
ENST00000556607.1
CDS GCA 72 bp CATGCTTGTCCAGGTTTCCAATTTCCTGCCGAGTACTaGACACTCCAGCTCCATACTCCTCAAGGACTTTGG +
Preference number: 6 (lower is better)
Translates to: HACPGFQFPAEY*TLQLHTPQGLW
Trigger: CCAAAGTCCTTGAGGAGTATGGAGCTGGAGTGTGCAGTACTCGGCAGGAAATTGGAAACCTGGACAAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216484.7
ENST00000554901.1
CDS GCA 72 bp TGTTGTACACACTCTTTACCAAGGCTGGTGCCATCCTaGCCCATGATGCACTTCATGGAGGTGATGATCTGC +
Preference number: 6 (lower is better)
Translates to: CCTHSLPRLVPS*PMMHFMEVMIC
Trigger: GCAGATCATCACCTCCATGAAGTGCATCATGGGGCAGGATGGCACCAGCCTTGGTAAAGAGTGTGTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216484.7