RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPTBN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000160460

Ensembl transcript IDs: ENST00000338932.7, ENST00000352632.7, ENST00000392023.1, ENST00000392025.5, ENST00000593816.1, ENST00000593932.1, ENST00000595535.5, ENST00000595690.1, ENST00000596411.1, ENST00000596900.5, ENST00000597389.5, ENST00000598249.6, ENST00000598775.1

Found 1917 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTCCGGCCCAGGCGCTCTGCAGCTGCTCCAGGCCCCGGCGCACTaGCTCTGCCTCCGGGCTGCGCAGCGACGCCAGCGCGCCCGCGCG +
Preference number: 1 (lower is better)
Translates to: QSGPGALQLLQAPAH*LCLRAAQRRQRARA
Trigger: CGCGCGGGCGCGCTGGCGTCGCTGCGCAGCCCGGAGGCAGAGGCAGTGCGCCGGGGCCTGGAGCAGCTGCAGAGCGCCTGGGCCGGACTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTaGTCCGCCGCCGCGGGGGTCGCGGGGGTCTCCGCCGCGTCCTCT +
Preference number: 1 (lower is better)
Translates to: SARSADSWRSGRGRT*SAAAGVAGVSAASS
Trigger: AGAGGACGCGGCGGAGACCCCCGCGACCCCCGCGGCGGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp TCTGCAGCTGCTCCAGGCCCCGGCGCACTGCCTCTGCCTCCGGGCTaGGCAGCGACGCCAGCGCGCCCGCGCGCTCCAGCACCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: SAAAPGPGALPLPPG*AATPARPRAPAPPP
Trigger: TGGAGGAGGTGCTGGAGCGCGCGGGCGCGCTGGCGTCGCTGCGCAGCCCGGAGGCAGAGGCAGTGCGCCGGGGCCTGGAGCAGCTGCAGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp CCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTaGTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCAGCT +
Preference number: 1 (lower is better)
Translates to: PGARPPRSAAHPPAP*SPAPAAAPPSAPAA
Trigger: AGCTGCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp GGGGCCGGTCCGGCCGAGGTGTCCGCTCGGGCAGCTCAAGCCCGTTaGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACG +
Preference number: 1 (lower is better)
Translates to: GAGPAEVSARAAQAR*AGDLGEARVAEAAT
Trigger: CGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACCTCGGCCGGACCGGCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTaGGCCTGCAGCTCTCCCACCTCGCGGTACCACTCCTCCACCTGC +
Preference number: 1 (lower is better)
Translates to: PTSSLLAGSSGSAAV*ACSSPTSRYHSSTC
Trigger: GCAGGTGGAGGAGTGGTACCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp TGCAACGGCTCGAGCAGGCGCACCAGGCGCTCGCCCACCGCGTTCTaGCGCTCACCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGC +
Preference number: 1 (lower is better)
Translates to: CNGSSRRTRRSPTAF*RSPTSSLLAGSSGS
Trigger: GCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCCTGCTCGAGCCGTTGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp CCGAGGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTaGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCAG +
Preference number: 1 (lower is better)
Translates to: PRCPLGQLKPVGQAT*GKLAWLRQRRPSRQ
Trigger: CTGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACCTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 90 bp GGATCTCCGGCAGCCGGTCAATGCGCGGCTGGAGGCGCTCGGGCTTaGGCTCCTGGCGCACATACCCCACCCGAGTCCGCACCTCGGCCG +
Preference number: 1 (lower is better)
Translates to: GSPAAGQCAAGGARA*APGAHTPPESAPRP
Trigger: CGGCCGAGGTGCGGACTCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCCGGAGATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp AGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTaGAGCTCTCCCACCTCGCGGTACCACTCCTCCACCTGCGACTCC +
Preference number: 1 (lower is better)
Translates to: SSLLAGSSGSAAVCA*SSPTSRYHSSTCDS
Trigger: GGAGTCGCAGGTGGAGGAGTGGTACCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp GCCAGCGCGCCCGCGCGCTCCAGCACCTCCTCCAGGCGCGGCCCATaGGCCTGGATCTCCCGCCGCAGGCCCTGGTTCTTTTTGATGTGC +
Preference number: 1 (lower is better)
Translates to: ASAPARSSTSSRRGP*AWISRRRPWFFLMC
Trigger: GCACATCAAAAAGAACCAGGGCCTGCGGCGGGAGATCCAGGCGCATGGGCCGCGCCTGGAGGAGGTGCTGGAGCGCGCGGGCGCGCTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp GGCAGCCGGTCAATGCGCGGCTGGAGGCGCTCGGGCTTGAGCTCCTaGCGCACATACCCCACCCGAGTCCGCACCTCGGCCGAGAGCGTG +
Preference number: 1 (lower is better)
Translates to: GSRSMRGWRRSGLSS*RTYPTRVRTSAESV
Trigger: CACGCTCTCGGCCGAGGTGCGGACTCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp ACCTGGTGCAACTCCTTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTaGAACGGCTCGAGCAGGCGCACCAGGCGCTCGCCCACCGCGTTC +
Preference number: 1 (lower is better)
Translates to: TWCNSLEASSKRRRS*NGSSRRTRRSPTAF
Trigger: GAACGCGGTGGGCGAGCGCCTGGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp TGCCGTGCCTTGGCCTGGGTGGTGCTCTCCAGCTCCGCCCAGCACTaGCGGATCTCGCCCAGCTTCTTCCGCACGGAGGCCGCCAGTTCG +
Preference number: 1 (lower is better)
Translates to: CRALAWVVLSSSAQH*RISPSFFRTEAASS
Trigger: CGAACTGGCGGCCTCCGTGCGGAAGAAGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 90 bp CGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCTaGGACTGCCGCCGGCTGATCTGCTCGCTGTCCGGGTGCCCCATC +
Preference number: 1 (lower is better)
Translates to: RSSPSSLSATYRRST*DCRRLICSLSGCPI
Trigger: GATGGGGCACCCGGACAGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp GGGTCCGCTGCATGGAACTGGCACTGGGTCTCGGCTCAGGCGGGGTaGTCAGGCGGGGCAGCCGCCTCCGCTTCTCCTCAATCTGTCCCT +
Preference number: 1 (lower is better)
Translates to: GSAAWNWHWVSAQAG*SGGAAASASPQSVP
Trigger: AGGGACAGATTGAGGAGAAGCGGAGGCGGCTGCCCCGCCTGACCACCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp TCATCCACGCTGCTGCCCAGCTCCCGGCTCTGCAGGAGCGGCTCCTaGGCTGTCAGCCAGGCATCAGCCACCACCGCCTCCTGGGCAAAC +
Preference number: 1 (lower is better)
Translates to: SSTLLPSSRLCRSGS*AVSQASATTASWAN
Trigger: GTTTGCCCAGGAGGCGGTGGTGGCTGATGCCTGGCTGACAGCCCAGGAGCCGCTCCTGCAGAGCCGGGAGCTGGGCAGCAGCGTGGATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp CAGGCTGCAGCCGCTTTGCGGAAGGCCTCATGTCGCCGGATAAGCTaGTCCACCTCATCCACGCTGCTGCCCAGCTCCCGGCTCTGCAGG +
Preference number: 1 (lower is better)
Translates to: QAAAALRKASCRRIS*STSSTLLPSSRLCR
Trigger: CCTGCAGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGGTGGAGCAGCTTATCCGGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp GGTCTGCTTTGCTGGCCTCAAAGAGCTGCCGTGCCTTGGCCTGGGTaGTGCTCTCCAGCTCCGCCCAGCACTGGCGGATCTCGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: GLLCWPQRAAVPWPG*CSPAPPSTGGSRPA
Trigger: AGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAGCAAAGCAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp ATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCA +
Preference number: 1 (lower is better)
Translates to: MPARRPGRAPPGATP*KPAASGGAPATARA
Trigger: TGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCAT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp CGAGGAGCTGCAGGTCATGCTCAAAGGCTCTCAGGGTCCGCTGCATaGAACTGGCACTGGGTCTCGGCTCAGGCGGGGTGGTCAGGCGGG +
Preference number: 1 (lower is better)
Translates to: RGAAGHAQRLSGSAA*NWHWVSAQAGWSGG
Trigger: CCCGCCTGACCACCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 90 bp GGTCGCGGACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTaGCATGCAGGCGGGCATCCTCACAGGCTGACAGCAGCTCTTTCC +
Preference number: 1 (lower is better)
Translates to: GRGLGCGSAGRRLWS*HAGGHPHRLTAALS
Trigger: GGAAAGAGCTGCTGTCAGCCTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTCCGCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp GCCCCATCTCCAGCAGCGCCCGGCACTGGCGCGACAGCTGCGCGATaGTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTT +
Preference number: 1 (lower is better)
Translates to: APSPAAPGTGATAAR*FPRSSPRLAPAAGV
Trigger: AACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGCATCGCGCAGCTGTCGCGCCAGTGCCGGGCGCTGCTGGAGATGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp TGCTCAAGCTCGCTCACCTGGCGGCTGAGCTGGTACAGCCAGTACTaGTGTTCCAGAGCCACCCGGCGCTCCTCACCCAGCTCCTTGAGC +
Preference number: 1 (lower is better)
Translates to: CSSSLTWRLSWYSQY*CSRATRRSSPSSLS
Trigger: GCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp GACACGAGGAGCTGCAGGTCATGCTCAAAGGCTCTCAGGGTCCGCTaGATGGAACTGGCACTGGGTCTCGGCTCAGGCGGGGTGGTCAGG +
Preference number: 1 (lower is better)
Translates to: DTRSCRSCSKALRVR*MELALGLGSGGVVR
Trigger: CCTGACCACCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCTCGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp CGGACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATaGAGGCGGGCATCCTCACAGGCTGACAGCAGCTCTTTCCAACCC +
Preference number: 1 (lower is better)
Translates to: RTWLWKRRASAVELT*RRASSQADSSSFQP
Trigger: GGGTTGGAAAGAGCTGCTGTCAGCCTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 90 bp CCTCCTTCTCGGCAATCCAGTGCTCAAGCTCGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACTGCTGTTCCAGAGCCACCCGGCGCT +
Preference number: 1 (lower is better)
Translates to: PPSRQSSAQARSPGG*AGTASTAVPEPPGA
Trigger: AGCGCCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp CCCTCCTGCAGCTGCCGTACCTGGGACACGAGGAGCTGCAGGTCATaGTCAAAGGCTCTCAGGGTCCGCTGCATGGAACTGGCACTGGGT +
Preference number: 1 (lower is better)
Translates to: PSCSCRTWDTRSCRS*SKALRVRCMELALG
Trigger: ACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCAGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp ATGACACGTCCCTGGGCTTGTCGGCTGCCCCAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCAGGTCGCGGACTTGGCTGTGGAAGC +
Preference number: 1 (lower is better)
Translates to: MTRPWACRLPQSGWR*HPSRRAGRGLGCGS
Trigger: GCTTCCACAGCCAAGTCCGCGACCTGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGGGACGTGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp GATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTaGAGCCGCTTTGCGGAAGGCCTCATGTCGCCGGATAAGCTGCTC +
Preference number: 1 (lower is better)
Translates to: DRGQAPQRAEPLFPG*SRFAEGLMSPDKLL
Trigger: GAGCAGCTTATCCGGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp CTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATaGCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTTACT +
Preference number: 1 (lower is better)
Translates to: LVQAEQRFPTVCAPG*RALGVLVEAQFPLT
Trigger: AGTAAGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp TTCTCGGCAATCCAGTGCTCAAGCTCGCTCACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGTTCCAGAGCCACCCGGCGCTCCTCA +
Preference number: 1 (lower is better)
Translates to: FSAIQCSSSLTWRLS*YSQYCCSRATRRSS
Trigger: TGAGGAGCGCCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp GTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTaGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGTCTCG +
Preference number: 1 (lower is better)
Translates to: VAAAVWPHSISSSTI*FTAASRSRPAIPVS
Trigger: CGAGACAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp TCAGCCATGGCACTTTTGTTGAGCAGCAGAGATCGCCCCAGCTCCTaGCAGGTGGTCAGCTCAGGCACCCGCGCCTCCAGCTCAGTCTTC +
Preference number: 1 (lower is better)
Translates to: SAMALLLSSRDRPSS*QVVSSGTRASSSVF
Trigger: GAAGACTGAGCTGGAGGCGCGGGTGCCTGAGCTGACCACCTGCCAGGAGCTGGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 90 bp GCCAGGTCTCCTCCAGGGTCCACGTCTTGCAGCTGGCTCTCCATGTaGAGGAGCTTCTTGTCCAGCTCAGCAAAGCTCTGCACCAGCTGG +
Preference number: 1 (lower is better)
Translates to: ARSPPGSTSCSWLSM*RSFLSSSAKLCTSW
Trigger: CCAGCTGGTGCAGAGCTTTGCTGAGCTGGACAAGAAGCTCCTTCACATGGAGAGCCAGCTGCAAGACGTGGACCCTGGAGGAGACCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp GGTGCCGGAGCCATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCATCTTCTCATGGATCCAGCCATCCA +
Preference number: 1 (lower is better)
Translates to: GAGAISYAACGCPPA*HPAPSASSHGSSHP
Trigger: TGGATGGCTGGATCCATGAGAAGATGCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATGGCTCCGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp CTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTAGTGTCTaGCCCCAGCGGGCGATCTCTGCGTGTTCCGCCACCGAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: LLGLPSSVDEVVGSV*PQRAISACSATEEA
Trigger: AGCTTCCTCGGTGGCGGAACACGCAGAGATCGCCCGCTGGGGCCAGACACTACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp TGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTaGCAGCCGTTCCCGCCCTGCCATACCTGTCTCGCTGGCAAACTC +
Preference number: 1 (lower is better)
Translates to: CMATLDQLIHHLVHS*QPFPPCHTCLAGKL
Trigger: GAGTTTGCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp GGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGTCTCGCTaGCAAACTCTGAGAATTTCTCCTGCAGCACCGAGACATGCTCAA +
Preference number: 1 (lower is better)
Translates to: GSQLPAVPALPYLSR*QTLRISPAAPRHAQ
Trigger: TTGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp TCATGGATCCAGCCATCCAGCTCGTGGCAGTCTCGGAGGAAGTGCTaGAGCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: SWIQPSSSWQSRRKC*SSSWSCSFCIHCWA
Trigger: GGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTGCCACGAGCTGGATGGCTGGATCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 90 bp CCATCCAGCTCGTGGCAGTCTCGGAGGAAGTGCTGCAGCTCAAGTTaGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTT +
Preference number: 1 (lower is better)
Translates to: PSSSWQSRRKCCSSS*SCSFCIHCWARNWF
Trigger: AAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTGCCACGAGCTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 90 bp CAGTCTCGGAGGAAGTGCTGCAGCTCAAGTTGGTCATGTAGCTTTTaGATCCATTGCTGGGCCCGTAACTGGTTTTCTTGGTTCCTGTGC +
Preference number: 1 (lower is better)
Translates to: QSRRKCCSSSWSCSF*IHCWARNWFSWFLC
Trigger: GCACAGGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 90 bp ACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: TRRSPTAFCRSPTSS*LAGSSGSAAVCACS
Trigger: GCTGCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCGGCGTCCAGCACCTaGTGCCGTCGCTCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: WAGDLGEARVAEAATAQQAASST*CRRSAA
Trigger: GGCTGCCGAGCGACGGCAGCAGGTGCTGGACGCCGC...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCAGCAGGGGCGCCGCCTTaGCCGCCAGTTCCGTGGGGT +
Preference number: 2 (lower is better)
Translates to: AGDLGEARVAEAATAQQAAGAPP*PPVPWG
Trigger: ACCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGC...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGGCCGCCGTCTGCGCCTaGAGCTCTCCCACCTCGCGG +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSAAVCA*SSPTSR
Trigger: CCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGC...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 90 bp GGGATCTCCGGCAGCCGGTCAATGCGCGGCTGGAGGCGCTCGGGCTaGAGCTCCTGGCGCACATACCCCACCCGAGTCCGCACCTCGGCC +
Preference number: 2 (lower is better)
Translates to: GISGSRSMRGWRRSG*SSWRTYPTRVRTSA
Trigger: GGCCGAGGTGCGGACTCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCCGGAGATCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCCACCCACCAGCTCCTTaGTCGCCGGCTCCAGCGGCA +
Preference number: 2 (lower is better)
Translates to: SARSADSWRSGRGRTCSAHPPAP*SPAPAA
Trigger: TGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTG...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGGCGTCCAGCACCTGCTaGCGTCGCTCGGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSASSTC*RRSAAS
Trigger: GGAGGCTGCCGAGCGACGGCAGCAGGTGCTGGACGC...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCACGATCAGCTGACTCCTaGCGCTCCGGTCGTGGCCGC +
Preference number: 2 (lower is better)
Translates to: AGDLGEARVAEAATAQQARSADS*RSGRGR
Trigger: GCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCG...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCA +
Preference number: 2 (lower is better)
Translates to: SARSADSWRSGRGRTCSAGCPPA*HPAPSA
Trigger: TGCTGATGGCGCGGGATGGCACGCGGGAGGACAACC...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGCCTCACCCAGCTCCTTaGGCGCCACGTACAGGCGGT +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSPHPAP*APRTGG
Trigger: ACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGG...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGCGTCGGCTGTGGAGCTaGCATGCAGGCGGGCATCCT +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSRRLWS*HAGGHP
Trigger: AGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACG...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGAAGCGGCGGCGCTCCTaGAACGGCTCGAGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVKRRRS*NGSSRR
Trigger: GCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTT...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCTTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: SARSADSWRSGRGRTCSALPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAA...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGTGCCGTGCCTTGGCCTaGGTGGTGCTCTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSCRALA*VVLSSS
Trigger: GGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCA...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCAGAGCTGCCGTGCCTTaGCCTGGGTGGTGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCRAAVP*PGWCSP
Trigger: TGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCT...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCAGCCTCCTCGGATTaGTCGACTGACTCTTGCCGC +
Preference number: 2 (lower is better)
Translates to: WAGDLGEARVAEAATAQQAASSD*STDSCR
Trigger: GCGGCAAGAGTCAGTCGATCAATCCGAGGAGGCTGC...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTCCGGCGCACTGCCTCTaGCTCCGGGCTGCGCAGCGA +
Preference number: 2 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPPAHCL*LRAAQR
Trigger: TCGCTGCGCAGCCCGGAGGCAGAGGCAGTGCGCCGG...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCAACCTCCAGCATCTGCTaGAGCCACTCCCAATGGCGG +
Preference number: 2 (lower is better)
Translates to: AGDLGEARVAEAATAQQATSSIC*SHSQWR
Trigger: CCGCCATTGGGAGTGGCTGCAGCAGATGCTGGAGGT...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCCCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGC +
Preference number: 2 (lower is better)
Translates to: SARSADSWRSGRGRTCSAPGATP*KPAASG
Trigger: GCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGG...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGTGCAGGAGCGGCTCCTaGGCTGTCAGCCAGGCATCA +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSCRSGS*AVSQAS
Trigger: TGATGCCTGGCTGACAGCCCAGGAGCCGCTCCTGCA...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 90 bp CATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTCCTaGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGC +
Preference number: 2 (lower is better)
Translates to: HASSSSRSCATWCNS*EASSKRRRSCNGSS
Trigger: GCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATGAGACTGCCGCCGGCTaGTCTGCTCGCTGTCCGGGT +
Preference number: 2 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDETAAG*SARCPG
Trigger: ACCCGGACAGCGAGCAGATCAGCCGGCGGCAGTCTC...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCCAGTCTCGGAGGAAGTaGTGCAGCTCAAGTTGGTCA +
Preference number: 2 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACQSRRK*CSSSWS
Trigger: TGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTG...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCCAGCTCGGCCATGAATaGCTGGTGCCGGAGCCATCT +
Preference number: 2 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTQLGHE*LVPEPS
Trigger: AGATGGCTCCGGCACCAGGCATTCATGGCCGAGCTG...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCCCAGCTGGTCTGCTTTaGTGGCCTCAAAGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SARSADSWRSGRGRTCSAPAGLL*WPQRAA
Trigger: GGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGG...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCCCGCCTGCAAACCGTTaGCTCGCTCTGTCTGCATGG +
Preference number: 2 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTPPANR*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGG...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCTGGTACAGCCAGTACTaGTGTTCCAGAGCCACCCGG +
Preference number: 2 (lower is better)
Translates to: SARSADSWRSGRGRTCSAWYSQY*CSRATR
Trigger: CCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCA...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGTGCAGCACCGAGACATaGTCAAAGTCCTGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: WAGDLGEARVAEAATAQQCSTET*SKSWPS
Trigger: GCTCGGCCAGGACTTTGAGCATGTCTCGGTGCTGCA...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGAGCTCTTTCCAACCCTaGAGCACCTCCTGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSSSFQP*STSCSR
Trigger: CCGGGAGCAGGAGGTGCTGCAGGGTTGGAAAGAGCT...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATCTGTGTGCCGCCTCGTaGTCCGCTGACTCCTGCCGC +
Preference number: 2 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDLCAAS*SADSCR
Trigger: GCGGCAGGAGTCAGCGGAGCACGAGGCGGCACACAG...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCAGCTCCGCCCAGCACTaGCGGATCTCGCCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGSSAQH*RISPSF
Trigger: GAAGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCT...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCGCATGGAACTGGCACTaGGTCTCGGCTCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGAWNWH*VSAQAG
Trigger: CCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGC...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATCGGTCAATGCGCGGCTaGAGGCGCTCGGGCTTGAGC +
Preference number: 2 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDRSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCG...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGGCATCTCCTGTTCGCTaGACTCCTGCCGCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSASPVR*TPAAPS
Trigger: GCTTGGAGCGGCAGGAGTCCAGCGAACAGGAGATGC...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCCGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACT +
Preference number: 2 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGRSPGG*AGTAST
Trigger: AGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCG...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCAGCTCTCGGGCGTCACTaGAGAACTTATGAAGCTCCC +
Preference number: 2 (lower is better)
Translates to: AGDLGEARVAEAATAQQAALGRH*RTYEAP
Trigger: GGGAGCTTCATAAGTTCTTCAGTGACGCCCGAGAGC...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCATTCTCGGCAATCCAGTaGTCAAGCTCGCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: AGDLGEARVAEAATAQQAFSAIQ*SSSLTW
Trigger: CCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAA...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCATCAGCATCTTCTCATaGATCCAGCCATCCAGCTCG +
Preference number: 2 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACISIFS*IQPSSS
Trigger: CGAGCTGGATGGCTGGATCCATGAGAAGATGCTGAT...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGT +
Preference number: 2 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSTWRLS*YSQYCC
Trigger: ACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGT...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCTCGTGCGCCACCTGGTaGAACTCCTTGGAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGSCATW*NSLEAS
Trigger: GCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGA...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGGGCCATGGTGGCCGCTaGTGTATGGCCACACTCGAT +
Preference number: 2 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVGHGGR*CMATLD
Trigger: ATCGAGTGTGGCCATACAGCAGCGGCCACCATGGCC...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTCTTGCGCCCCAGCAGTaGGGTAGGCGGCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPLAPQQ*GRRLLA
Trigger: AGCAAGCAGCCGCCTACCCCACTGCTGGGGCGCAAG...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATTCGGGCTTGAGCTCCTaGCGCACATACCCCACCCGA +
Preference number: 2 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDSGLSS*RTYPTR
Trigger: TCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGA...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTCGCCTCGTGCTCCGCTaGCTCCTGCCGCTCCGGCCG +
Preference number: 2 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGRLVLR*LLPLRP
Trigger: CGGCCGGAGCGGCAGGAGTCAGCGGAGCACGAGGCG...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGTGCTCTGTTCGTCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 2 (lower is better)
Translates to: WAGDLGEARVAEAATAQQCSVRP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGACGAACAGAGCA...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGGGACCCCCAGCACCTaGGGTGGGGGTGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIGTPST*GGGGEW
Trigger: CCACTCACCACCCCCACCCCAGGTGCTGGGGGTCCC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR CCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTTCCTGCATCAGTTGCTaGCCCTCCCGCTCGATCTTC +
Preference number: 2 (lower is better)
Translates to: ERHVQAVHLRLPPADLLASCISC*PSRSIF
Trigger: GAAGATCGAGCGGGAGGGCCAGCAACTGATGCAGGA...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 90 bp AGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTGCAGCCGCTTaGCGGAAGGCCTCATGTCGCCGGATAAGCTGCTCCACCTCATCC +
Preference number: 2 (lower is better)
Translates to: RRRRELNLSSQAAAA*RKASCRRISCSTSS
Trigger: GGATGAGGTGGAGCAGCTTATCCGGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCAGCTCAGCAAAGCTCTaGACCAGCTGGTCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTSSAKL*TSWSAL
Trigger: CAAAGCAGACCAGCTGGTGCAGAGCTTTGCTGAGCT...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGATCATGAGCAGCTCCTaGTCGCCCAGCCACGCCTCC +
Preference number: 2 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLIMSSS*SPSHAS
Trigger: GGAGGCGTGGCTGGGCGAGCAGGAGCTGCTCATGAT...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGCCTGGGCTTGTCGGCTaGCCCAATCTGGCTGGCGAT +
Preference number: 2 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSPGLVG*PNLAGD
Trigger: ATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGG...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTCCGGCAGCCGGTCAATaGGCGGCTGGAGGCGCTCGG +
Preference number: 2 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLPAAGQ*AAGGAR
Trigger: CCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCCGG...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGTGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 90 bp TTCCTGCGCCCGCTGGCCCTGCGATCTCCGCCTTCCCTCTTAGGGTaGCCCTCATCTGTGGATGAAGTAGTGGGTAGTGTCTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: FLRPLALRSPPSLLG*PSSVDEVVGSVWPQ
Trigger: CTGGGGCCAGACACTACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCGCAGGGCCAGCGGGCGCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCTTTGTGCCCACAGTaGGGAAAAGAGGGGAGACGA +
Preference number: 2 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSLCPQ*GKEGRR
Trigger: TCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR GCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCCGGAGCCATCTCTTATaGAGCTTGTGGTTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGRSHLL*SLWLSS
Trigger: GGAGGACAACCACAAGCTGCATAAGAGATGGCTCCG...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTAGTTCGGGCTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACT...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTGCTGGTCTGCTTTGCTaGCCTCAAAGAGCTGCCGTG +
Preference number: 2 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPAGLLC*PQRAAV
Trigger: CACGGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGC...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGGCCTCCTGGGCAAACTaGTGCACCTCCAGCATCTGC +
Preference number: 2 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSASWAN*CTSSIC
Trigger: GCAGATGCTGGAGGTGCACCAGTTTGCCCAGGAGGC...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 90 bp AGCTCGGCCATGAATGCCTGGTGCCGGAGCCATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCATCTTC +
Preference number: 2 (lower is better)
Translates to: SSAMNAWCRSHLLCS*WLSSRVPSRAISIF
Trigger: GAAGATGCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGTGTCCTCACTCATCATaGGCAGCTCCTGCTCGCCCA +
Preference number: 2 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSCPHSS*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACA...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTTCGTGCTGCACTGTGTaGGTGGGCGGTGGCGGAGGC +
Preference number: 2 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLSCCTV*VGGGGG
Trigger: GCCTCCGCCACCGCCCACTCACACAGTGCAGCACGA...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCTCAACTGGCCCCCTaGCCACCCCCATCAAGCTCA +
Preference number: 2 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAQLAP*PPPSSS
Trigger: TGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCTGAGGCGGCGGAGTaGAGGGGGCTAGGGCCCCTT +
Preference number: 2 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSEAAE*RGLGPL
Trigger: AAGGGGCCCTAGCCCCCTGCACTCCGCCGCCTCAGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR GCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGTTCTCCTGCATCAGTTaGTGGCCCTCCCGCTCGATC +
Preference number: 2 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLFSCIS*WPSRSI
Trigger: GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAA...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATTGCTGGGCCCGTAACTaGTTTTCTTGGTTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDCWARN*FSWFLC
Trigger: GCACAGGAACCAAGAAAACCAGTTACGGGCCCAGCA...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTTCGGCCATGAATGCCTaGTGCCGGAGCCATCTCTTA +
Preference number: 2 (lower is better)
Translates to: APEPMPARRPGRAPPGATSAMNA*CRSHLL
Trigger: TAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGA...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTCCAGCTCCTGGCAGGTaGTCAGCTCAGGCACCCGCG +
Preference number: 2 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGPAPGR*SAQAPA
Trigger: CGCGGGTGCCTGAGCTGACCACCTGCCAGGAGCTGG...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTAGTGGCAGCCGCTCCTaGACCCATGCCAGCTCGTCG +
Preference number: 2 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLSGSRS*THASSS
Trigger: CGACGAGCTGGCATGGGTTCAGGAGCGGCTGCCACT...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCTTTGTGCCCACAGTaGGGAAAAGAGGGGAGACGA +
Preference number: 2 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSLCPQ*GKEGRR
Trigger: TCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTTGGTTCTTTTTGATGTaGTGCTGGACCGCCTGCAAA +
Preference number: 2 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAWFFLM*CWTACK
Trigger: TTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCTCTGAGAATTTCTCCTaGAGCACCGAGACATGCTCA +
Preference number: 2 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGSENFS*STETCS
Trigger: TGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGA...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTCCTCATCCACGCTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLPHPRC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGG...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 90 bp GAGCTGACTGTTGACAGTGGCCAGGTCTCCTCCAGGGTCCACGTCTaGCAGCTGGCTCTCCATGTGAAGGAGCTTCTTGTCCAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: ELTVDSGQVSSRVHV*QLALHVKELLVQLS
Trigger: GCTGAGCTGGACAAGAAGCTCCTTCACATGGAGAGCCAGCTGCAAGACGTGGACCCTGGAGGAGACCTGGCCACTGTCAACAGTCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCTTTGTGCCCACAGTaGGGAAAAGAGGGGAGACGA +
Preference number: 2 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSLCPQ*GKEGRR
Trigger: TCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCTTTGTGCCCACAGTaGGGAAAAGAGGGGAGACGA +
Preference number: 2 (lower is better)
Translates to: PPFRCPPCHASSVLELGASLCPQ*GKEGRR
Trigger: TCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR GCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTTGCTGCTGGACCGCCTaGAAACCGTTGCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGCCWTA*KPLPRS
Trigger: AGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCA...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCAGCCATCCAGCTCGTaGCAGTCTCGGAGGAAGTGC +
Preference number: 2 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVQPSSS*QSRRKC
Trigger: GCACTTCCTCCGAGACTGCCACGAGCTGGATGGCTG...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGAGGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMRSCAT*CNSLEA
Trigger: GGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCT...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTTGCAGCCACTCCCAATaGCGGTCCCACTTTTCCGAC +
Preference number: 2 (lower is better)
Translates to: IFSIVVRRRRELNLSSQACSHSQ*RSHFSD
Trigger: GTCGGAAAAGTGGGACCGCCATTGGGAGTGGCTGCA...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTT +
Preference number: 2 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLSFCIH*WARNWF
Trigger: AAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCT...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGAAAAAGTGTCTTTGTaGCCACAGTGCGGAAAAGAG +
Preference number: 2 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVEKVSL*PQCGKE
Trigger: CTCTTTTCCGCACTGTGGGCACAAAGACACTTTTTC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTCCCCTCCTTTCCGGTaGCCACCATGTCACGCGTCC +
Preference number: 2 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSPPFR*PPCHAS
Trigger: GGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
3UTR-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACACCACTTCTTGGGGTaGAGGAGAAGTCCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHHFLG*RRSPLL
Trigger: AAGGAGGGGACTTCTCCTGCACCCCAAGAAGTGGTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR GCA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGGCCATGAATGCCTGGTaGCGGAGCCATCTCTTATGC +
Preference number: 2 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQAMNAW*RSHLLC
Trigger: GCATAAGAGATGGCTCCGGCACCAGGCATTCATGGC...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGTTTTGCATCCATTGCTaGGCCCGTAACTGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLFCIHC*ARNWFS
Trigger: AGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAA...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGCTCTTATGCAGCTTGTaGTTGTCCTCCCGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQLLCSL*LSSRVP
Trigger: TGGCACGCGGGAGGACAACCACAAGCTGCATAAGAG...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR TCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTAGCCACTCCTTATTCTaGGCCAGCTCGGCCATGAAT +
Preference number: 2 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLSHSLF*ASSAMN
Trigger: ATTCATGGCCGAGCTGGCTCAGAATAAGGAGTGGCT...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTTTCTTTTTGATGTGCTaGTGGACCGCCTGCAAACCG +
Preference number: 2 (lower is better)
Translates to: IFSIVVRRRRELNLSSQAFFLMC*WTACKP
Trigger: CGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAA...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTCAGCTTGTCCAGCTGTaGCTGGATCTCATCAGCCAT +
Preference number: 2 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGQLVQL*LDLISH
Trigger: ATGGCTGATGAGATCCAGGCACAGCTGGACAAGCTG...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTTTTTTGATGTGCTGCTaGACCGCCTGCAAACCGTTG +
Preference number: 2 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGFLMCC*TACKPL
Trigger: CAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CCA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGTGCTGCAGCTCAAGTTaGTCATGTAGCTTTTGCATC +
Preference number: 2 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMCCSSS*SCSFCI
Trigger: GATGCAAAAGCTACATGACCAACTTGAGCTGCAGCA...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACATCAAGCTCAGTTATTaGATAAAAATAAGGGACCCC +
Preference number: 2 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHIKLSY*IKIRDP
Trigger: GGGGTCCCTTATTTTTATGCAATAACTGAGCTTGAT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
3UTR GCA 72 bp TCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTaGTCCGCCGCCGCGGGGGTCGCGGGGGTCTCCGCC +
Preference number: 3 (lower is better)
Translates to: SADSWRSGRGRT*SAAAGVAGVSA
Trigger: GGCGGAGACCCCCGCGACCCCCGCGGCGGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGAGCAGGGGCGCCGCCTaGGCCGCCAGTTCCGTGGGG +
Preference number: 3 (lower is better)
Translates to: WAGDLGEARVAEAATAQQSRGAA*AASSVG
Trigger: CCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGCT...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTaGTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCG +
Preference number: 3 (lower is better)
Translates to: RPPRSAAHPPAP*SPAPAAAPPSA
Trigger: CGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 72 bp CCGCCGCCTCCTGGGCAGCTCCTCCGCGCGATCAGCTaGCTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTC +
Preference number: 3 (lower is better)
Translates to: PPPPGQLLRAIS*LLALRSWPHLL
Trigger: GAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGAGGAGCTGCCCAGGAGGCGGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp CTCCTGGGCAGCTCCTCCGCGCGATCAGCTGACTCCTaGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCGCC +
Preference number: 3 (lower is better)
Translates to: LLGSSSARSADS*RSGRGRTCSAA
Trigger: GGCGGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGAGGAGCTGCCCAGGAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp CCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTaGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCC +
Preference number: 3 (lower is better)
Translates to: PLGQLKPVGQAT*GKLAWLRQRRP
Trigger: GGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTaGGCCTGCAGCTCTCCCACCTCGCGGTACCACTCC +
Preference number: 3 (lower is better)
Translates to: SLLAGSSGSAAV*ACSSPTSRYHS
Trigger: GGAGTGGTACCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TCGAGCAGGCGCACCAGGCGCTCGCCCACCGCGTTCTaGCGCTCACCCACCAGCTCCTTGCTCGCCGGCTCC +
Preference number: 3 (lower is better)
Translates to: SSRRTRRSPTAF*RSPTSSLLAGS
Trigger: GGAGCCGGCGAGCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCCTGCTCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CCCGCGCGCTCCAGCACCTCCTCCAGGCGCGGCCCATaGGCCTGGATCTCCCGCCGCAGGCCCTGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: PARSSTSSRRGP*AWISRRRPWFF
Trigger: AAAGAACCAGGGCCTGCGGCGGGAGATCCAGGCGCATGGGCCGCGCCTGGAGGAGGTGCTGGAGCGCGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp CCGGCCGAGGTGTCCGCTCGGGCAGCTCAAGCCCGTTaGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: PAEVSARAAQAR*AGDLGEARVAE
Trigger: CTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACCTCGGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCTCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGC +
Preference number: 3 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTSPTSS*LAGSSG
Trigger: GCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGA...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 72 bp CCGCCGCCTCCGCGCAGCCTCCTCGGATTGATCGACTaGCTCTTGCCGCTCAGGCCGCCGCCTCCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: PPPPRSLLGLID*LLPLRPPPPGQ
Trigger: CTGCCCAGGAGGCGGCGGCCTGAGCGGCAAGAGTCAGTCGATCAATCCGAGGAGGCTGCGCGGAGGCGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TACTGCTCCACCTGGAAGGCGGCGTCCAGCACCTGCTaGCGTCGCTCGGCAGCCTCCCGCAGTCCGGCCCAG +
Preference number: 3 (lower is better)
Translates to: YCSTWKAASSTC*RRSAASRSPAQ
Trigger: CTGGGCCGGACTGCGGGAGGCTGCCGAGCGACGGCAGCAGGTGCTGGACGCCGCCTTCCAGGTGGAGCAGTA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCCTTCTCCTGCATCAGTaGCTGGCCCTCCCGCTCGAT +
Preference number: 3 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACLLLHQ*LALPLD
Trigger: ATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAG...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGTGGAGGCGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 3 (lower is better)
Translates to: WAGDLGEARVAEAATAQQWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCA...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 72 bp GCAGCCGGTCAATGCGCGGCTGGAGGCGCTCGGGCTTaGGCTCCTGGCGCACATACCCCACCCGAGTCCGCA +
Preference number: 3 (lower is better)
Translates to: AAGQCAAGGARA*APGAHTPPESA
Trigger: TGCGGACTCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp TCAATGCGCGGCTGGAGGCGCTCGGGCTTGAGCTCCTaGCGCACATACCCCACCCGAGTCCGCACCTCGGCC +
Preference number: 3 (lower is better)
Translates to: SMRGWRRSGLSS*RTYPTRVRTSA
Trigger: GGCCGAGGTGCGGACTCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp CTCCCCGGGATCTCCGGCAGCCGGTCAATGCGCGGCTaGAGGCGCTCGGGCTTGAGCTCCTGGCGCACATAC +
Preference number: 3 (lower is better)
Translates to: LPGISGSRSMRG*RRSGLSSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCCGGAGATCCCGGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 72 bp CCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCTaGGACTGCCGCCGGCTGATCTGCTCGCTGTCCGGG +
Preference number: 3 (lower is better)
Translates to: PSSLSATYRRST*DCRRLICSLSG
Trigger: CCCGGACAGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TCTCCTCTGATGGGCATCTCCTGTTCGCTGGACTCCTaGCGCTCCAAGCGCCGCTCACGCCGCTCGCGCCGC +
Preference number: 3 (lower is better)
Translates to: SPLMGISCSLDS*RSKRRSRRSRR
Trigger: GCGGCGCGAGCGGCGTGAGCGGCGCTTGGAGCGGCAGGAGTCCAGCGAACAGGAGATGCCCATCAGAGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp GCATGGAACTGGCACTGGGTCTCGGCTCAGGCGGGGTaGTCAGGCGGGGCAGCCGCCTCCGCTTCTCCTCAA +
Preference number: 3 (lower is better)
Translates to: AWNWHWVSAQAG*SGGAAASASPQ
Trigger: TTGAGGAGAAGCGGAGGCGGCTGCCCCGCCTGACCACCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGTTATGCAGCTTGTGGTaGTCCTCCCGCGTGCCATCC +
Preference number: 3 (lower is better)
Translates to: WAGDLGEARVAEAATAQQLCSLW*SSRVPS
Trigger: GGATGGCACGCGGGAGGACAACCACAAGCTGCATAA...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCAAGCTGCAGGTGTTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 3 (lower is better)
Translates to: AGDLGEARVAEAATAQQASCRCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAACACCTGCAGCT...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTaGAACTCCTTGGAAGCCAGCAGCAAGCGGCGGCGC +
Preference number: 3 (lower is better)
Translates to: HASSSSRSCATW*NSLEASSKRRR
Trigger: GCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TCCACCTCATCCACGCTGCTGCCCAGCTCCCGGCTCTaGAGGAGCGGCTCCTGGGCTGTCAGCCAGGCATCA +
Preference number: 3 (lower is better)
Translates to: STSSTLLPSSRL*RSGSWAVSQAS
Trigger: TGATGCCTGGCTGACAGCCCAGGAGCCGCTCCTGCAGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp CGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACG +
Preference number: 3 (lower is better)
Translates to: RRPGRAPPGATP*KPAASGGAPAT
Trigger: CGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCTGGACGACG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp CGCTCCAGCACCTCCTCCAGGCGCGGCCCATGCGCCTaGATCTCCCGCCGCAGGCCCTGGTTCTTTTTGATG +
Preference number: 3 (lower is better)
Translates to: RSSTSSRRGPCA*ISRRRPWFFLM
Trigger: CATCAAAAAGAACCAGGGCCTGCGGCGGGAGATCCAGGCGCATGGGCCGCGCCTGGAGGAGGTGCTGGAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCGTGCTCTGTTCGTCCTaGCCCTTGTCCTCACTCATC +
Preference number: 3 (lower is better)
Translates to: SARSADSWRSGRGRTCSAVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGACGAACAGAGCAC...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGGGGGTAGGCGGCTGCTaGCTCTGTTCCGCTTTGATT +
Preference number: 3 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSGVGGC*LCSALI
Trigger: AATCAAAGCGGAACAGAGCAAGCAGCCGCCTACCCC...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CCAGCAGCGCCCGGCACTGGCGCGACAGCTGCGCGATaGTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: PAAPGTGATAAR*FPRSSPRLAPA
Trigger: AGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGCATCGCGCAGCTGTCGCGCCAGTGCCGGGCGCTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TCGCTCACCTGGCGGCTGAGCTGGTACAGCCAGTACTaGTGTTCCAGAGCCACCCGGCGCTCCTCACCCAGC +
Preference number: 3 (lower is better)
Translates to: SLTWRLSWYSQY*CSRATRRSSPS
Trigger: GCTGGGTGAGGAGCGCCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CCCTGGGCTTGTCGGCTGCCCCAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCAGGTCGCGGACTTGGC +
Preference number: 3 (lower is better)
Translates to: PWACRLPQSGWR*HPSRRAGRGLG
Trigger: GCCAAGTCCGCGACCTGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp GCCGCTTTGCGGAAGGCCTCATGTCGCCGGATAAGCTaGTCCACCTCATCCACGCTGCTGCCCAGCTCCCGG +
Preference number: 3 (lower is better)
Translates to: AALRKASCRRIS*STSSTLLPSSR
Trigger: CCGGGAGCTGGGCAGCAGCGTGGATGAGGTGGAGCAGCTTATCCGGCGACATGAGGCCTTCCGCAAAGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp ACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCCAGCAGCAAGCGGCGG +
Preference number: 3 (lower is better)
Translates to: THASSSSRSCAT*CNSLEASSKRR
Trigger: CCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTACCGCCTGCAAACCGTaGCCTCGCTCTGTCTGCATG +
Preference number: 3 (lower is better)
Translates to: ERHVQAVHLRLPPADLLATACKP*PRSVCM
Trigger: CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGT...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CCCTCCTGCAGCTGCCGTACCTGGGACACGAGGAGCTaGAGGTCATGCTCAAAGGCTCTCAGGGTCCGCTGC +
Preference number: 3 (lower is better)
Translates to: PSCSCRTWDTRS*RSCSKALRVRC
Trigger: GCAGCGGACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCAGGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATaGAGGCGGGCATCCTCACAGGCTGACAGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: LWKRRASAVELT*RRASSQADSSS
Trigger: AGAGCTGCTGTCAGCCTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTaGAGCCGCTTTGCGGAAGGCCTCATGTCGCCGGAT +
Preference number: 3 (lower is better)
Translates to: QAPQRAEPLFPG*SRFAEGLMSPD
Trigger: ATCCGGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp GCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATaGCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTC +
Preference number: 3 (lower is better)
Translates to: AEQRFPTVCAPG*RALGVLVEAQF
Trigger: GAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp CATGCTCAAAGGCTCTCAGGGTCCGCTGCATGGAACTaGCACTGGGTCTCGGCTCAGGCGGGGTGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: HAQRLSGSAAWN*HWVSAQAGWSG
Trigger: GCCTGACCACCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGCCTTTGAGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp GCAGGTCATGCTCAAAGGCTCTCAGGGTCCGCTGCATaGAACTGGCACTGGGTCTCGGCTCAGGCGGGGTGG +
Preference number: 3 (lower is better)
Translates to: AGHAQRLSGSAA*NWHWVSAQAGW
Trigger: CCACCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGCCTTTGAGCATGACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACCGCC +
Preference number: 3 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGRPWFF*MCCWTA
Trigger: GGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGTGTTCGTCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 3 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGACGAACA...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGTCCTCACCCAGCTCCTaGAGCGCCACGTACAGGCGG +
Preference number: 3 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSSSPSS*SATYRR
Trigger: CCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGA...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TTCTTCCGCACGGAGGCCGCCAGTTCGGGCTTCTCCTaGATCAGTTGCTGGCCCTCCCGCTCGATCTTCTCC +
Preference number: 3 (lower is better)
Translates to: FFRTEAASSGFS*ISCWPSRSIFS
Trigger: GGAGAAGATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTCCGTGCGGAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TGCACCAGCTGGTCTGCTTTGCTGGCCTCAAAGAGCTaGCGTGCCTTGGCCTGGGTGGTGCTCTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: CTSWSALLASKS*RALAWVVLSSS
Trigger: GGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TCCTTGCCCTTGTCCTCACTCATCATGAGCAGCTCCTaGTCGCCCAGCCACGCCTCCACCTCAGCCACGTCG +
Preference number: 3 (lower is better)
Translates to: SLPLSSLIMSSS*SPSHASTSATS
Trigger: CGACGTGGCTGAGGTGGAGGCGTGGCTGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACAAGGGCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp AGCTGCAGGTCATGCTCAAAGGCTCTCAGGGTCCGCTaGATGGAACTGGCACTGGGTCTCGGCTCAGGCGGG +
Preference number: 3 (lower is better)
Translates to: SCRSCSKALRVR*MELALGLGSGG
Trigger: CCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGCCTTTGAGCATGACCTGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CAGGCATCAGCCACCACCGCCTCCTGGGCAAACTGGTaGACCTCCAGCATCTGCTGCAGCCACTCCCAATGG +
Preference number: 3 (lower is better)
Translates to: QASATTASWANW*TSSICCSHSQW
Trigger: CCATTGGGAGTGGCTGCAGCAGATGCTGGAGGTGCACCAGTTTGCCCAGGAGGCGGTGGTGGCTGATGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp TCCCGCGTGCCATCCCGCGCCATCAGCATCTTCTCATaGATCCAGCCATCCAGCTCGTGGCAGTCTCGGAGG +
Preference number: 3 (lower is better)
Translates to: SRVPSRAISIFS*IQPSSSWQSRR
Trigger: CCTCCGAGACTGCCACGAGCTGGATGGCTGGATCCATGAGAAGATGCTGATGGCGCGGGATGGCACGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp GATGACACGTCCCTGGGCTTGTCGGCTGCCCCAATCTaGCTGGCGATGCCATCCATCCAGGAGAGCAGGTCG +
Preference number: 3 (lower is better)
Translates to: DDTSLGLSAAPI*LAMPSIQESRS
Trigger: CGACCTGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGGGACGTGTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTTCCAGGGTCCACGTCTaGCAGCTGGCTCTCCATGTG +
Preference number: 3 (lower is better)
Translates to: APEPMPARRPGRAPPGATSRVHV*QLALHV
Trigger: CACATGGAGAGCCAGCTGCAAGACGTGGACCCTGGA...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTGTAGTTCTCCACGCCTaGCTCCAGCTGCAGGTGTTT +
Preference number: 3 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAVVLHA*LQLQVF
Trigger: AAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTAC...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GAGGCCGCCAGTTCGGGCTTCTCCTGCATCAGTTGCTGGCCCTCCCGCTCGATCCATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTG +
Preference number: 3 (lower is better)
Translates to: EAASSGFSCISCWPSRSIHLLCS*WLSSRV
Trigger: CACGCGGGAGGACAACCACAAGCTGCATAAGAGATG...GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TCGGCCATGAATGCCTGGTGCCGGAGCCATCTCTTATaGAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGC +
Preference number: 3 (lower is better)
Translates to: SAMNAWCRSHLL*SLWLSSRVPSR
Trigger: GCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp CCAGCTCAGCAAAGCTCTGCACCAGCTGGTCTGCTTTaGTGGCCTCAAAGAGCTGCCGTGCCTTGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: PAQQSSAPAGLL*WPQRAAVPWPG
Trigger: CCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGTGCAGAGCTTTGCTGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp AATGCCTGGTGCCGGAGCCATCTCTTATGCAGCTTGTaGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGC +
Preference number: 3 (lower is better)
Translates to: NAWCRSHLLCSL*LSSRVPSRAIS
Trigger: GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATGGCTCCGGCACCAGGCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp TCCCGCCGCAGGCCCTGGTTCTTTTTGATGTGCTGCTaGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: SRRRPWFFLMCC*TACKPLPRSVC
Trigger: GCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp ATCCAGTGCTCAAGCTCGCTCACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGTTCCAGAGCCACCCGG +
Preference number: 3 (lower is better)
Translates to: IQCSSSLTWRLS*YSQYCCSRATR
Trigger: CCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGAGCACTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTGACACGTCCCTGGGCTaGTCGGCTGCCCCAATCTGG +
Preference number: 3 (lower is better)
Translates to: IFSIVVRRRRELNLSSQADTSLG*SAAPIW
Trigger: CCAGATTGGGGCAGCCGACAAGCCCAGGGACGTGTC...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 72 bp CGGCAATCCAGTGCTCAAGCTCGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACTGCTGTTCCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: RQSSAQARSPGG*AGTASTAVPEP
Trigger: TGGCTCTGGAACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGAGCACTGGATTGCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp ATCTCCCGCCGCAGGCCCTGGTTCTTTTTGATGTGCTaGTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTC +
Preference number: 3 (lower is better)
Translates to: ISRRRPWFFLMC*WTACKPLPRSV
Trigger: GACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp TGGATCTCCCGCCGCAGGCCCTGGTTCTTTTTGATGTaGTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCT +
Preference number: 3 (lower is better)
Translates to: WISRRRPWFFLM*CWTACKPLPRS
Trigger: AGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGAGATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp AGCTGCCGTACCTGGGACACGAGGAGCTGCAGGTCATaGTCAAAGGCTCTCAGGGTCCGCTGCATGGAACTG +
Preference number: 3 (lower is better)
Translates to: SCRTWDTRSCRS*SKALRVRCMEL
Trigger: CAGTTCCATGCAGCGGACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp TTGCCCTCATCTGTGGATGAAGTAGTGGGTAGTGTCTaGCCCCAGCGGGCGATCTCTGCGTGTTCCGCCACC +
Preference number: 3 (lower is better)
Translates to: LPSSVDEVVGSV*PQRAISACSAT
Trigger: GGTGGCGGAACACGCAGAGATCGCCCGCTGGGGCCAGACACTACCCACTACTTCATCCACAGATGAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACACGCGTCCTCAGTGTaGGAACTAGGGGCTCCCGCC +
Preference number: 3 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHASSV*ELGAPA
Trigger: GGCGGGAGCCCCTAGTTCCAACACTGAGGACGCGTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR CAA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTCAGGCTGCAGCCGCTTaGCGGAAGGCCTCATGTCGC +
Preference number: 3 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGQAAAA*RKASCR
Trigger: GCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTG...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR TCA 72 bp GCTGTGCCTGGATCTCATCAGCCATGGCACTTTTGTTaGGCAGCAGAGATCGCCCCAGCTCCTGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: AVPGSHQPWHFC*AAEIAPAPGRW
Trigger: CCACCTGCCAGGAGCTGGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGGCTGATGAGATCCAGGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp ACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTaGCAGCCGTTCCCGCCCTGCCATACCTGTCTCGCT +
Preference number: 3 (lower is better)
Translates to: TLDQLIHHLVHS*QPFPPCHTCLA
Trigger: AGCGAGACAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp CTGCCAGCCGTTCCCGCCCTGCCATACCTGTCTCGCTaGCAAACTCTGAGAATTTCTCCTGCAGCACCGAGA +
Preference number: 3 (lower is better)
Translates to: LPAVPALPYLSR*QTLRISPAAPR
Trigger: TCTCGGTGCTGCAGGAGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp GCTGTATGGCCACACTCGATCAGCTCATCCACCATCTaGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATA +
Preference number: 3 (lower is better)
Translates to: AVWPHSISSSTI*FTAASRSRPAI
Trigger: TATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 3 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCTCCCCACCACTTCTaGGGGTGCAGGAGAAGTCCC +
Preference number: 3 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSPHHF*GCRRSP
Trigger: GGGACTTCTCCTGCACCCCAAGAAGTGGTGGGGAGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACACCACCCCAGCTTCTaGGGGCAGGATCTGCAGATC +
Preference number: 3 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHHPSF*GQDLQI
Trigger: GATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR GCA 72 bp CTTCTTGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTaGCCACCATGTCACGCGTCCTCAGTGTTGGAACTA +
Preference number: 3 (lower is better)
Translates to: LLGVQEKSPPFR*PPCHASSVLEL
Trigger: TAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR GCA 72 bp GCCATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCATCTTCTCATGGATCC +
Preference number: 3 (lower is better)
Translates to: AISYAACGCPPA*HPAPSASSHGS
Trigger: GGATCCATGAGAAGATGCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp AGGCCCTGGTTCTTTTTGATGTGCTGCTGGACCGCCTaGAAACCGTTGCCTCGCTCTGTCTGCATGGCCAGT +
Preference number: 3 (lower is better)
Translates to: RPWFFLMCCWTA*KPLPRSVCMAS
Trigger: ACTGGCCATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACATCAAGCTCAGTTATaGCATAAAAATAAGGGACCC +
Preference number: 3 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRHQAQL*HKNKGP
Trigger: GGGTCCCTTATTTTTATGCAATAACTGAGCTTGATG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR CAA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTACCAGCTGGTCTGCTTaGCTGGCCTCAAAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLTSWSA*LASKSC
Trigger: GCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGT...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp TCGTGGCAGTCTCGGAGGAAGTGCTGCAGCTCAAGTTaGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGT +
Preference number: 3 (lower is better)
Translates to: SWQSRRKCCSSS*SCSFCIHCWAR
Trigger: ACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTGCCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGAAGAAAAAGTGTCTTaGTGCCCACAGTGCGGAAAA +
Preference number: 3 (lower is better)
Translates to: PPFRCPPCHASSVLELGAEEKVS*CPQCGK
Trigger: TTTTCCGCACTGTGGGCACAAAGACACTTTTTCTTC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGAAGAAAAAGTGTCTTaGTGCCCACAGTGCGGAAAA +
Preference number: 3 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTREEKVS*CPQCGK
Trigger: TTTTCCGCACTGTGGGCACAAAGACACTTTTTCTTC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR-3UTR CAA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCACCACCCCAGCTTCTaGGGGCAGGATCTGCAGATC +
Preference number: 3 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHHHPSF*GQDLQI
Trigger: GATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGTG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
3UTR TCA 72 bp TTCCCGCCCTGCCATACCTGTCTCGCTGGCAAACTCTaGGAATTTCTCCTGCAGCACCGAGACATGCTCAAA +
Preference number: 3 (lower is better)
Translates to: FPPCHTCLAGKL*EFLLQHRDMLK
Trigger: TTTGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGGCAGGGCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR GCA 72 bp ATCCAGCCATCCAGCTCGTGGCAGTCTCGGAGGAAGTaGTGCAGCTCAAGTTGGTCATGTAGCTTTTGCATC +
Preference number: 3 (lower is better)
Translates to: IQPSSSWQSRRK*CSSSWSCSFCI
Trigger: GATGCAAAAGCTACATGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTGCCACGAGCTGGATGGCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGAAGAAAAAGTGTCTTaGTGCCCACAGTGCGGAAAA +
Preference number: 3 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTEEKVS*CPQCGK
Trigger: TTTTCCGCACTGTGGGCACAAAGACACTTTTTCTTC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR GCA 72 bp TGCAGCTCAAGTTGGTCATGTAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTTTCTTGGTTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: CSSSWSCSFCIH*WARNWFSWFLC
Trigger: GCACAGGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CCA 72 bp AGCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTaGGCCCGTAACTGGTTTTCTTGGTTCCTGTGCCTG +
Preference number: 3 (lower is better)
Translates to: SSSWSCSFCIHC*ARNWFSWFLCL
Trigger: CAGGCACAGGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 72 bp TCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SPTAFCRSPTSS*LAGSSGSAAVC
Trigger: GCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCTGCTCGCTGTCCGGGTaGCCCATCTCCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACCSLSG*PISSSA
Trigger: GGCGCTGCTGGAGATGGGGCACCCGGACAGCGAGCA...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCTCCAGAAGGGCCGCCTaGCGCGGCTCCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SARSADSWRSGRGRTCSASRRAA*RGSSAC
Trigger: GCAGGCGCTGGAGCCGCGCCAGGCGGCCCTTCTGGA...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGTGCCGCCGGCTGATCTaGTCGCTGTCCGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: WAGDLGEARVAEAATAQQCRRLI*SLSGCP
Trigger: GGGGCACCCGGACAGCGAGCAGATCAGCCGGCGGCA...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGCCCAGCTCCCGGCTCTaGAGGAGCGGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WAGDLGEARVAEAATAQQPSSRL*RSGSWA
Trigger: AGCCCAGGAGCCGCTCCTGCAGAGCCGGGAGCTGGG...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGCGCTTCTCACGCACCTaGGCGCGCACCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: WAGDLGEARVAEAATAQQRFSRT*ARTSAT
Trigger: GGTGGCCGAGGTGCGCGCCCAGGTGCGTGAGAAGCG...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCTGCCGTGCCTTGGCCTaGGTGGTGCTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACCRALA*VVLSSS
Trigger: GGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCA...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCGCAGGGGCGCCGCCTTaGCCGCCAGTTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTAGAPP*PPVPWG
Trigger: ACCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGC...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACGCCTCGTGCTCCGCTaGCTCCTGCCGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRLVLR*LLPLRP
Trigger: CGGCCGGAGCGGCAGGAGTCAGCGGAGCACGAGGCG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCGAAGTCACCGGCGGCTaGCAGGCGGTAAGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCEVTGG*QAVSVA
Trigger: CGCGACGCTTACCGCCTGGCAGCCGCCGGTGACTTC...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGCACCACCAGTGGCCCTaGGCCACTGGCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSHHQWP*ATGTPE
Trigger: CTCGGGGGTGCCAGTGGCGCAGGGCCACTGGTGGTG...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCCTGGCCTCAAAGAGCTaGCGTGCCTTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACLASKS*RALAWV
Trigger: CACCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAG...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCCCTCTCTTCCCAGGCTaGAGCCGCTTTGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACPLFPG*SRFAEG
Trigger: GCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGG...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGGAGGCGGCCAGCAGCTaGGCCCGTGTGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSEAASS*ARVPMS
Trigger: GCTCATGGGCACACGGGCCCAGCTGCTGGCCGCCTC...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCCGATCAGCTGACTCCTaGCGCTCCGGTCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SARSADSWRSGRGRTCSARSADS*RSGRGR
Trigger: GCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCG...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 72 bp GGCAGCCGGTCAATGCGCGGCTGGAGGCGCTCGGGCTaGAGCTCCTGGCGCACATACCCCACCCGAGTCCGC +
Preference number: 4 (lower is better)
Translates to: GSRSMRGWRRSG*SSWRTYPTRVR
Trigger: GCGGACTCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCGGAACGCACCTCATCTaGACTGGGGTGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACGTHLI*TGVASF
Trigger: GAAGGAGGCCACCCCAGTTCAGATGAGGTGCGTTCC...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCCTCCGCGCGATCAGCTaGCTCCTGGCGCTCCGGTCG +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTLRAIS*LLALRS
Trigger: CGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGAG...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACGCGCTGCCTGCTCCTaGAGCTCCGCCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRAACS*SSARQP
Trigger: CGGCTGCCTGGCGGAGCTGCAGGAGCAGGCAGCGCG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCCACGGGCCCGCGATGTaGCTCCACCTCCCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTHGPAM*LHLPGE
Trigger: CTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTG...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTCGCGGCTCCAGCGCCTaGAGAGCGGCCTCTAGGCCG +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLARGSSA*RAASRP
Trigger: CGGCCTAGAGGCCGCTCTGCAGGCGCTGGAGCCGCG...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCCAGGCGCGGCCCATaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSRRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCGCATGGGCCGCGCCTGGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCCAGCCGTTCCCGCCCTaGCATACCTGTCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCQPFPP*HTCLAG
Trigger: GCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTG...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCGCTCTCAGGGTCCGCTaGATGGAACTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACALRVR*MELALG
Trigger: ACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGC...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTCCGGCAGCCGGTCAATaGGCGGCTGGAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAPAAGQ*AAGGAR
Trigger: CCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCCGG...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCAGGTCAGCGCCGAACTaGTGCAGCGCCCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTRSAPN*CSARAS
Trigger: GGAGGCGCGGGCGCTGCACCAGTTCGGCGCTGACCT...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTGCGTCCCGCAGCCACTaGCGCCTCAGCGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAASRSH*RLSAAT
Trigger: AGTGGCGGCGCTGAGGCGCCAGTGGCTGCGGGACGC...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCCCTCTTCTAGGCTGTTaGGCAGGGGCCCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCPLLGC*AGAPRC
Trigger: GCAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGG...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCTCAGGGTCCGCTGCATaGAACTGGCACTGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACSGSAA*NWHWVS
Trigger: CGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGA...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCTCGCGGACTTGGCTGTaGAAGCGCAGGGCGTCGGCT +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCSRTWL*KRRASA
Trigger: AGCCGACGCCCTGCGCTTCCACAGCCAAGTCCGCGA...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCCTTGCGCCCCAGCAGTaGGGTAGGCGGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCLAPQQ*GRRLLA
Trigger: AGCAAGCAGCCGCCTACCCCACTGCTGGGGCGCAAG...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCGCAGCTCAAGCCCGTTaGGCAGGCGACCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCAAQAR*AGDLGE
Trigger: TTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGC...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCCTCGCCGCAGGCCTaGGCCGCGCTAGCTAGCGCG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLASPQA*AALASA
Trigger: CGCGCTAGCTAGCGCGGCTCAGGCCTGCGGCGAGGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGGTCCACCTCCTCCTTaGGCGCAGCGTGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRGPPPP*AQRGAP
Trigger: TGGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACGCCTCGTGCTCCGCTaGCTCCTGCCGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRLVLR*LLPLRP
Trigger: CGGCCGGAGCGGCAGGAGTCAGCGGAGCACGAGGCG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGGAAGCTCGCGTGGCTaGGGCAGCGACGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRGSSRG*GSDGPA
Trigger: TGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCACACCGCAGGGCCTaGTGCAGCAACGCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPHRRA*CSNARR
Trigger: GCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTGTGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTCAGGTGCACGGTGTCTaGTCCCGGGCCGACGGCACC +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAQVHGV*SRADGT
Trigger: GGTGCCGTCGGCCCGGGAGCAGACACCGTGCACCTG...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCTCCACCACGCGCACCTaGAGCGCCACCACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTSTTRT*SATTSG
Trigger: GCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGA...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GAGGCCGCCAGTTCGGGCTTCTCCTGCATCAGTTGCTGGCCCTCCCGCTCGATCGCGGCGTCCAGCACCTaGTGCCGTCGCTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EAASSGFSCISCWPSRSIAASST*CRRSAA
Trigger: GGCTGCCGAGCGACGGCAGCAGGTGCTGGACGCCGC...GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGGAGGCGCGCTGTGCTaGACAGGTCATGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRGGALC*TGHARR
Trigger: GCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGGTCAGCGCCGAACTaGTGCAGCGCCCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRSAPN*CSARAS
Trigger: GGAGGCGCGGGCGCTGCACCAGTTCGGCGCTGACCT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTGCGCCAGGCGGCGGCTaGAAGCTTCGTCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAAPGGG*KLRRGR
Trigger: TCGGCCACGACGAAGCTTCCAGCCGCCGCCTGGCGC...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACAGCGCCACCACCAGTaGCCCTGCGCCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRQRHHQ*PCATGT
Trigger: GGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCCTTGAGCGCAGCGTaGCGCGCCAGCAGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSLSAA*RASSAS
Trigger: GGACGCGCTGCTGGCGCGCCACGCTGCGCTCAAGGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTTCCTTGAGCGCAGCGTaGCGCGCCAGCAGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLASLSAA*RASSAS
Trigger: GGACGCGCTGCTGGCGCGCCACGCTGCGCTCAAGGA...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCTCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATGGGGGAAGCTCGCGTaGCTGAGGCAGCGACGGCCC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRWGKLA*LRQRRP
Trigger: GGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGTGGGGGAAGCTCGCGTaGCTGAGGCAGCGACGGCCC +
Preference number: 4 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVWGKLA*LRQRRP
Trigger: GGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCA...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCGCTGCACTGTGTGAGTaGGCGGTGGCGGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGAALCE*AVAEAR
Trigger: CCGCGCCTCCGCCACCGCCCACTCACACAGTGCAGC...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACTTCCAGGAGCCGCGTaGGCACGAAGCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLPGAA*ARSRPG
Trigger: TCCGGGACGGCTTCGTGCTCACGCGGCTCCTGGAAG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCACTCGACGTCGTCGAGTaGATCCGGCACACGCATGGA +
Preference number: 4 (lower is better)
Translates to: AGDLGEARVAEAATAQQALDVVE*IRHTHG
Trigger: TCCATGCGTGTGCCGGATTCACTCGACGACGTCGAG...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGGCCTCGCCGCAGGCCTaGGCCGCGCTAGCTAGCGCG +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLASPQA*AALASA
Trigger: CGCGCTAGCTAGCGCGGCTCAGGCCTGCGGCGAGGC...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGAGACTGCCGCCGGCTaGTCTGCTCGCTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRETAAG*SARCPG
Trigger: ACCCGGACAGCGAGCAGATCAGCCGGCGGCAGTCTC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCGAGACTGCCGCCGGCTaGTCTGCTCGCTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGETAAG*SARCPG
Trigger: ACCCGGACAGCGAGCAGATCAGCCGGCGGCAGTCTC...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGCGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSRSPGG*AGTAST
Trigger: AGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCG...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCGGCGCCGCAGAGAGCTaGACCTCTCTTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTGAAES*TSLPRL
Trigger: CAGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCC...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCGTGCTGCACTGTGTaGGTGGGCGGTGGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSCCTV*VGGGGG
Trigger: GCCTCCGCCACCGCCCACTCACACAGTGCAGCACGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGCCTCCACCAGGTGCTaGCCACACTCCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRASTRC*PHSRDS
Trigger: GCTGTCCCGGGAGTGTGGGCAGCACCTGGTGGAGGC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACGCGCTGCCTGCTCCTaGAGCTCCGCCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRAACS*SSARQP
Trigger: CGGCTGCCTGGCGGAGCTGCAGGAGCAGGCAGCGCG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTCGTCGCCGCGCTGCCTaGTCCTGCAGCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPRRRAA*SCSSAR
Trigger: CCTGGCGGAGCTGCAGGAGCAGGCAGCGCGGCGACG...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCGTCGCCGCGCTGCCTaGTCCTGCAGCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRRRAA*SCSSAR
Trigger: CCTGGCGGAGCTGCAGGAGCAGGCAGCGCGGCGACG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTGCCTCCTCCAGCTCCTaGAGCAGCGCCCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAASSSS*SSAHRL
Trigger: GAGCCTGTGGGCGCTGCTGCAGGAGCTGGAGGAGGC...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCCCAGGAGGCGCGCTGTaGTGGACAGGTCATGCGCGC +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGPGGAL*WTGHAR
Trigger: GCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGG...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACACCGCAGGGCCTGCTaGAGCAACGCTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSHRRAC*SNARRP
Trigger: CGGGCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCCACAGCTCACACGCGTaGACCTCGCCAAACATGCGG +
Preference number: 4 (lower is better)
Translates to: SARSADSWRSGRGRTCSAHSSHA*TSPNMR
Trigger: CCGCATGTTTGGCGAGGTGCACGCGTGTGAGCTGTG...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCCTCTCGAATCGGTGCTaGACCACCTCGACGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SARSADSWRSGRGRTCSALSNRC*TTSTSS
Trigger: CGACGACGTCGAGGTGGTGCAGCACCGATTCGAGAG...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACGCGGCTCCAGCGCCTaGAGAGCGGCCTCTAGGCCG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRGSSA*RAASRP
Trigger: CGGCCTAGAGGCCGCTCTGCAGGCGCTGGAGCCGCG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCTCAGCAGGCCCTCTaGAGCCTGCACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPQQAL*SLHGHL
Trigger: CAGGTGGCCGTGCAGGCTGCAGAGGGCCTGCTGAGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTCCTCAGCAGGCCCTCTaGAGCCTGCACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAPQQAL*SLHGHL
Trigger: CAGGTGGCCGTGCAGGCTGCAGAGGGCCTGCTGAGG...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCCGCCGTCTGCGCCTaGAGCTCTCCCACCTCGCGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLAAVCA*SSPTSR
Trigger: CCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCCGCCGTCTGCGCCTaGAGCTCTCCCACCTCGCGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSAAVCA*SSPTSR
Trigger: CCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTTCGCCCACCGCGTTCTaGCGCTCACCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLASPTAF*RSPTSS
Trigger: GGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGA...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATAAGCGGCGGCGCTCCTaGAACGGCTCGAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDKRRRS*NGSSRR
Trigger: GCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTT...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGTCGTGCGCCACCTGGTaGAACTCCTTGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WAGDLGEARVAEAATAQQSCATW*NSLEAS
Trigger: GCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGA...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCTTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTLPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAA...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCTGCTGCTGGACCGCCTaGAAACCGTTGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCCCWTA*KPLPRS
Trigger: AGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCA...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCCAGGCGCGGCCCATaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSRRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCGCATGGGCCGCGCCTGGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCGGCGCACTGCCTCTaGCTCCGGGCTGCGCAGCGA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPAHCL*LRAAQR
Trigger: TCGCTGCGCAGCCCGGAGGCAGAGGCAGTGCGCCGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGCCCCCTCCTGCAGCTaGCGTACCTGGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRAPSCS*RTWDTR
Trigger: CCTCGTGTCCCAGGTACGGCAGCTGCAGGAGGGGGC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCGCTGTGGAGCTGACATaGAGGCGGGCATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCAVELT*RRASSQ
Trigger: CTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGC...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCAGGCTGCAGCCGCTTTaGGGAAGGCCTCATGTCGCC +
Preference number: 4 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTRLQPL*GRPHVA
Trigger: GGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCT...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCCTGTGTGCCGCCTCGTaGTCCGCTGACTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGLCAAS*SADSCR
Trigger: GCGGCAGGAGTCAGCGGAGCACGAGGCGGCACACAG...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTTGCGCCCGCTGGCCCTaGGATCTCCGCCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLACARWP*DLRLPS
Trigger: AGAGGGAAGGCGGAGATCGCAGGGCCAGCGGGCGCA...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCTGAGGCGGCGGAGTaGAGGGGGCTAGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSEAAE*RGLGPL
Trigger: AAGGGGCCCTAGCCCCCTGCACTCCGCCGCCTCAGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGTGCAGGATCTTGTGCTaGGCCAGGAGGCGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSCRILC*ARRRAV
Trigger: CACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCA...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGCTGGAAGCTTCGTCGTaGCCGAAGTCACCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSLEASS*PKSPAA
Trigger: AGCCGCCGGTGACTTCGGCCACGACGAAGCTTCCAG...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCCACCTGCTGTTGAGGTaGTCCTGGCAGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCHLLLR*SWQERT
Trigger: GGTGCGTTCCTGCCAGGACCACCTCAACAGCAGGTG...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCCAGAAGGGCCGCCTaGCGCGGCTCCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSRRAA*RGSSAC
Trigger: GCAGGCGCTGGAGCCGCGCCAGGCGGCCCTTCTGGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCAGCAGCGCCTCGCTaGCCGCCACGATGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPAAPR*PPRCEH
Trigger: ATGCTCGCATCGTGGCGGCCAGCGAGGCGCTGCTGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCAGAGCTGCCGTGCCTTaGCCTGGGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTRAAVP*PGWCSP
Trigger: TGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCT...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCCTGATGACACGTCCCTaGGCTTGTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCLMTRP*ACRLPQ
Trigger: TTGGGGCAGCCGACAAGCCCAGGGACGTGTCATCAG...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTCGGTCAATGCGCGGCTaGAGGCGCTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLARSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCG...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGTCTAGCTGCTGGATCTaGGGAGGTCTGGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: WAGDLGEARVAEAATAQQSSCWI*GGLGVP
Trigger: GGGAACCCCCAGACCTCCCCAGATCCAGCAGCTAGA...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCCTCGCCGCAGGCCTaGGCCGCGCTAGCTAGCGCG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRASPQA*AALASA
Trigger: CGCGCTAGCTAGCGCGGCTCAGGCCTGCGGCGAGGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCCCTCACCCAGCTCCTTaGGCGCCACGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGPHPAP*APRTGG
Trigger: ACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGG...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCTCCTCAATCTGTCCCTaGAGCTCTCGGGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCSSICP*SSRASL
Trigger: CAGTGACGCCCGAGAGCTTCAGGGACAGATTGAGGA...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATGGAGGCGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDGGARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCC...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTCCGCGCGATCAGCTaGCTCCTGGCGCTCCGGTCG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLRAIS*LLALRS
Trigger: CGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGCCTCGTGCTCCGCTaGCTCCTGCCGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRLVLR*LLPLRP
Trigger: CGGCCGGAGCGGCAGGAGTCAGCGGAGCACGAGGCG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTGGAAGCTCGCGTGGCTaGGGCAGCGACGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPGSSRG*GSDGPA
Trigger: TGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCC...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATTAACCGCATGGCTCTaGGGCGGCGGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLTAWL*GGGVQG
Trigger: CCCCTGCACTCCGCCGCCTCAGAGCCATGCGGTTAA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGTGGGCCTGGGCAGCTaGTCCCCAGACAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRVGLGS*SPDSTS
Trigger: GGAAGTGCTGTCTGGGGAGCAGCTGCCCAGGCCCAC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGTGGATCCGCATaGGGCCGCGCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSVSGSA*GRAWAW
Trigger: CCAGGCCCACGCGCGGCCGCATGCGGATCCACTCAC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCGCGCTGCCTGCTCCTaGAGCTCCGCCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRAACS*SSARQP
Trigger: CGGCTGCCTGGCGGAGCTGCAGGAGCAGGCAGCGCG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCACCGATTCCACTGTaGCCGGGAGCTCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPPIPL*PGAPHQ
Trigger: CTGGTGCGGAGCTCCCGGGCACAGTGGAATCGGTGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRGCPPA*HPAPSA
Trigger: TGCTGATGGCGCGGGATGGCACGCGGGAGGACAACC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGCAGCTCGGCCATGAATaGCTGGTGCCGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSQLGHE*LVPEPS
Trigger: AGATGGCTCCGGCACCAGGCATTCATGGCCGAGCTG...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCAGTTCGGGCTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACT...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCCAGGCGCGGCCCATaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSRRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCGCATGGGCCGCGCCTGGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCAGGCGCTCTGCAGCTaGTCCAGGCCCCGGCGCACT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLQALCS*SRPRRT
Trigger: AGTGCGCCGGGGCCTGGAGCAGCTGCAGAGCGCCTG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTCAGGCGCTCTGCAGCTaGTCCAGGCCCCGGCGCACT +
Preference number: 4 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPQALCS*SRPRRT
Trigger: AGTGCGCCGGGGCCTGGAGCAGCTGCAGAGCGCCTG...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCGGCGTCCAGCACCTaGTGCCGTCGCTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVAASST*CRRSAA
Trigger: GGCTGCCGAGCGACGGCAGCAGGTGCTGGACGCCGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGCCGCCGGCTGATCTaGTCGCTGTCCGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLCRRLI*SLSGCP
Trigger: GGGGCACCCGGACAGCGAGCAGATCAGCCGGCGGCA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCATGGTACAGCCAGTACTaGTGTTCCAGAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: AGDLGEARVAEAATAQQAWYSQY*CSRATR
Trigger: CCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCA...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACAGCCGTTCCCGCCCTaGCATACCTGTCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRQPFPP*HTCLAG
Trigger: GCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCTGCACCTCCAGCATCTaGTGCAGCCACTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: SARSADSWRSGRGRTCSACTSSI*CSHSQW
Trigger: CCATTGGGAGTGGCTGCAGCAGATGCTGGAGGTGCA...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCACCTCATCCACGCTaGTGCCCAGCTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPPHPR*CPAPGS
Trigger: AGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGGTGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCAGCGGGCGATCTCTaGGTGTTCCGCCACCGAGGA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPAGDL*VFRHRG
Trigger: TCCTCGGTGGCGGAACACGCAGAGATCGCCCGCTGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCACCAGCGCCCCCGTaGCCATCCCTAGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSPAPP*PSLGQR
Trigger: TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGTGCCTGGCCTCTAGCTaGTGGATCTGGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSCLASS*WIWGGL
Trigger: CAGACCTCCCCAGATCCAGCAGCTAGAGGCCAGGCA...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGGTCAGCGCCGAACTaGTGCAGCGCCCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRSAPN*CSARAS
Trigger: GGAGGCGCGGGCGCTGCACCAGTTCGGCGCTGACCT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCGCCAGGCGGCGGCTaGAAGCTTCGTCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLAPGGG*KLRRGR
Trigger: TCGGCCACGACGAAGCTTCCAGCCGCCGCCTGGCGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCGAGTGTCGCCAGCTaGCGCCGCAGGCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPSVAS*RRRPLT
Trigger: CGTGAGCGGCCTGCGGCGCCAGCTGGCGACACTCGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCCCTGCGCCACTaGCACCCCCGAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSVALRH*HPRVSP
Trigger: TGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCCAC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTCAGCGCCACCACCAGTaGCCCTGCGCCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: APEPMPARRPGRAPPGATQRHHQ*PCATGT
Trigger: GGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTG...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACAGCGCCACCACCAGTaGCCCTGCGCCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSQRHHQ*PCATGT
Trigger: GGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCGCACCTCATCTGAACTaGGGTGGCCTCCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCAPHLN*GGLLPP
Trigger: TGGTGGAAGGAGGCCACCCCAGTTCAGATGAGGTGC...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCGCTTCTCACGCACCTaGGCGCGCACCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRFSRT*ARTSAT
Trigger: GGTGGCCGAGGTGCGCGCCCAGGTGCGTGAGAAGCG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCCAGCCATCCAGCTCGTaGCAGTCTCGGAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTQPSSS*QSRRKC
Trigger: GCACTTCCTCCGAGACTGCCACGAGCTGGATGGCTG...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGCTCCGCCCAGCACTaGCGGATCTCGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSSAQH*RISPSF
Trigger: GAAGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGTGTCTGCATGGCCAGTaGCAGCCGCTCCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSCLHGQ*QPLLNP
Trigger: TGGGTTCAGGAGCGGCTGCCACTGGCCATGCAGACA...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCGCGGACTTGGCTGTaGAAGCGCAGGGCGTCGGCT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSRTWL*KRRASA
Trigger: AGCCGACGCCCTGCGCTTCCACAGCCAAGTCCGCGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCAGCAGGTCGCGGACTTaGCTGTGGAAGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGSRSRT*LWKRRA
Trigger: CGCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCT...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACTTGCGCCCCAGCAGTaGGGTAGGCGGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLAPQQ*GRRLLA
Trigger: AGCAAGCAGCCGCCTACCCCACTGCTGGGGCGCAAG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCTTTCATAGCCCCCTaGCCGCAGCAGGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPFIAP*PQQGRR
Trigger: GCGGCGCCCCTGCTGCGGCCAGGGGGCTATGAAAGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCAGGCCGCCGCCTCCTaGGCAGCTCCTCCGCGCGAT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVQAAAS*AAPPRD
Trigger: ATCGCGCGGAGGAGCTGCCCAGGAGGCGGCGGCCTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGCAGGCCGCCGCCTCCTaGGCAGCTCCTCCGCGCGAT +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLQAAAS*AAPPRD
Trigger: ATCGCGCGGAGGAGCTGCCCAGGAGGCGGCGGCCTG...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCCAGCAGGCAGCCCTaGGCCTGCCTCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPSRQP*ACLFLL
Trigger: CAGGAGAAAGAGGCAGGCCCAGGGCTGCCTGCTGGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCCCAGCAGGCAGCCCTaGGCCTGCCTCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVPSRQP*ACLFLL
Trigger: CAGGAGAAAGAGGCAGGCCCAGGGCTGCCTGCTGGG...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGGGGGAAGCTCGCGTaGCTGAGGCAGCGACGGCCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSWGKLA*LRQRRP
Trigger: GGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCTGCACTGTGTGAGTaGGCGGTGGCGGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLAALCE*AVAEAR
Trigger: CCGCGCCTCCGCCACCGCCCACTCACACAGTGCAGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCACCAGCTCCTTGCTCGCCGGCTCCAGCGGCAGCGCCGCCGTCTGCGCCTGCCTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: PTSSLLAGSSGSAAVCACLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...GCAGGCGCAGACGGCGGCGCTGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGGGACCCCCAGCACCTaGGGTGGGGGTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSGTPST*GGGGEW
Trigger: CCACTCACCACCCCCACCCCAGGTGCTGGGGGTCCC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGGGACCCCCAGCACCTaGGGTGGGGGTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLGTPST*GGGGEW
Trigger: CCACTCACCACCCCCACCCCAGGTGCTGGGGGTCCC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCAGGGCAGCGGCATTaGGAGCCTCCACCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVAGQRH*EPPPAR
Trigger: GCGAGCGGGTGGAGGCTCTCAATGCCGCTGCCCTGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGAGACTGCCGCCGGCTaGTCTGCTCGCTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSETAAG*SARCPG
Trigger: ACCCGGACAGCGAGCAGATCAGCCGGCGGCAGTCTC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRSPGG*AGTAST
Trigger: AGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGGAGGCGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLGGARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCGTGCTGCACTGTGTaGGTGGGCGGTGGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSCCTV*VGGGGG
Trigger: GCCTCCGCCACCGCCCACTCACACAGTGCAGCACGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAAAGAGCGAGGCCGCTaGGGTGGACGCAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSKERGR*GGRSRL
Trigger: CAGCCGGCTGCGTCCACCGCAGCGGCCTCGCTCTTT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACGCGCCAGCCCCAGGTaGTGCTCAGCTGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRASPR*CSAVRK
Trigger: CTTCCGCACAGCTGAGCAGCACCTGGGGCTGGCGCG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGCTGTCACGCTGGGCTaGCACCCGCCGGATATCGTA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRAVTLG*HPPDIV
Trigger: TACGATATCCGGCGGGTGGCAGCCCAGCGTGACAGC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCCTCCACCAGGTGCTaGCCACACTCCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSASTRC*PHSRDS
Trigger: GCTGTCCCGGGAGTGTGGGCAGCACCTGGTGGAGGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCGCGCTGCCTGCTCCTaGAGCTCCGCCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRAACS*SSARQP
Trigger: CGGCTGCCTGGCGGAGCTGCAGGAGCAGGCAGCGCG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCGTCGCCGCGCTGCCTaGTCCTGCAGCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRRRAA*SCSSAR
Trigger: CCTGGCGGAGCTGCAGGAGCAGGCAGCGCGGCGACG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCCTCCTCCAGCTCCTaGAGCAGCGCCCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSASSSS*SSAHRL
Trigger: GAGCCTGTGGGCGCTGCTGCAGGAGCTGGAGGAGGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCCAGGCCTACCAGGTaGACGGTGTCTGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLARPTR*TVSAPG
Trigger: CCCGGGAGCAGACACCGTGCACCTGGTAGGCCTGGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCCAGGCCTACCAGGTaGACGGTGTCTGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSARPTR*TVSAPG
Trigger: CCCGGGAGCAGACACCGTGCACCTGGTAGGCCTGGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCCTCTTCCAGCCTCTaGCAGCGGCGCCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAASSSL*QRRRAL
Trigger: GAGCGCCCGGCGCCGCTGGCAGAGGCTGGAAGAGGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCCTCTTCCAGCCTCTaGCAGCGGCGCCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRASSSL*QRRRAL
Trigger: GAGCGCCCGGCGCCGCTGGCAGAGGCTGGAAGAGGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGAAGTCACCGGCGGCTaGCAGGCGGTAAGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLEVTGG*QAVSVA
Trigger: CGCGACGCTTACCGCCTGGCAGCCGCCGGTGACTTC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCACGGGCCCGCGATGTaGCTCCACCTCCCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVHGPAM*LHLPGE
Trigger: CTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCCACCACGCGCACCTaGAGCGCCACCACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSTTRT*SATTSG
Trigger: GCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCGCGGCTCCAGCGCCTaGAGAGCGGCCTCTAGGCCG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRGSSA*RAASRP
Trigger: CGGCCTAGAGGCCGCTCTGCAGGCGCTGGAGCCGCG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCGCGGCTCCAGCGCCTaGAGAGCGGCCTCTAGGCCG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGARGSSA*RAASRP
Trigger: CGGCCTAGAGGCCGCTCTGCAGGCGCTGGAGCCGCG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCGCTGGCCGCCACGATaGGAGCATAGTCTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVRWPPR*EHSLPR
Trigger: GCGAGGAAGACTATGCTCGCATCGTGGCGGCCAGCG...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCCATGAATGCCTGGTaGCGGAGCCATCTCTTATGC +
Preference number: 4 (lower is better)
Translates to: WAGDLGEARVAEAATAQQAMNAW*RSHLLC
Trigger: GCATAAGAGATGGCTCCGGCACCAGGCATTCATGGC...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACTGGCCTCAAAGAGCTaGCGTGCCTTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLASKS*RALAWV
Trigger: CACCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCGCCGCCGTCTGCGCCTaGAGCTCTCCCACCTCGCGG +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISAAVCA*SSPTSR
Trigger: CCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGC...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCCGCCGTCTGCGCCTaGAGCTCTCCCACCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAAVCA*SSPTSR
Trigger: CCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCTCCAGGCGCGGCCCATaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISSRRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCGCATGGGCCGCGCCTGGA...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCGGCGCACTGCCTCTaGCTCCGGGCTGCGCAGCGA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPAHCL*LRAAQR
Trigger: TCGCTGCGCAGCCCGGAGGCAGAGGCAGTGCGCCGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCGTCCAGCACCTGCTaGCGTCGCTCGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVASSTC*RRSAAS
Trigger: GGAGGCTGCCGAGCGACGGCAGCAGGTGCTGGACGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCTCGCTGTCCGGGTaGCCCATCTCCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCSLSG*PISSSA
Trigger: GGCGCTGCTGGAGATGGGGCACCCGGACAGCGAGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCATCTGGTTCACAGCTaGCAGCCGTTCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVHLVHS*QPFPPC
Trigger: GCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATG...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCCCCCTCCTGCAGCTaGCGTACCTGGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLAPSCS*RTWDTR
Trigger: CCTCGTGTCCCAGGTACGGCAGCTGCAGGAGGGGGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCTGGGCTTGTCGGCTaGCCCAATCTGGCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPGLVG*PNLAGD
Trigger: ATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCCAGCTCCCGGCTCTaGAGGAGCGGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPSSRL*RSGSWA
Trigger: AGCCCAGGAGCCGCTCCTGCAGAGCCGGGAGCTGGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGGCTGCAGCCGCTTTaGGGAAGGCCTCATGTCGCC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRLQPL*GRPHVA
Trigger: GGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCGGCAGCCGGTCAATaGGCGGCTGGAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPAAGQ*AAGGAR
Trigger: CCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCCGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCGGCAGCCGGTCAATaGGCGGCTGGAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPAAGQ*AAGGAR
Trigger: CCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCCGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTTCCCCACCGTGTGTaGTCCCGGATGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSVPHRV*SRMPGP
Trigger: AGGGCCCGGCATCCGGGAGCACACACGGTGGGGAAC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATCCAGCGGGCGATCTCTaGGTGTTCCGCCACCGAGGA +
Preference number: 4 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDPAGDL*VFRHRG
Trigger: TCCTCGGTGGCGGAACACGCAGAGATCGCCCGCTGG...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCGCCCGCTGGCCCTaGGATCTCCGCCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCARWP*DLRLPS
Trigger: AGAGGGAAGGCGGAGATCGCAGGGCCAGCGGGCGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCTGAGGCGGCGGAGTaGAGGGGGCTAGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSEAAE*RGLGPL
Trigger: AAGGGGCCCTAGCCCCCTGCACTCCGCCGCCTCAGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGGCGGCCATGGGGACTaGCCACAACCCAATCCCCCG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLGGHGD*PQPNPP
Trigger: CGGGGGATTGGGTTGTGGGCAGTCCCCATGGCCGCC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGTCGTCGTCCAGGTCGTaGGCCACCTGGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVSSSRS*ATWCNS
Trigger: GGAGTTGCACCAGGTGGCGCACGACCTGGACGACGA...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGAGGCGCGCTGTGCTaGACAGGTCATGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVGGALC*TGHARR
Trigger: GCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGGTCAGCGCCGAACTaGTGCAGCGCCCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRSAPN*CSARAS
Trigger: GGAGGCGCGGGCGCTGCACCAGTTCGGCGCTGACCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACTGGAAGCTTCGTCGTaGCCGAAGTCACCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLEASS*PKSPAA
Trigger: AGCCGCCGGTGACTTCGGCCACGACGAAGCTTCCAG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCGAGTGTCGCCAGCTaGCGCCGCAGGCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPSVAS*RRRPLT
Trigger: CGTGAGCGGCCTGCGGCGCCAGCTGGCGACACTCGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGTGGCCCTGCGCCACTaGCACCCCCGAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVVALRH*HPRVSP
Trigger: TGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCCAC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCGTCCCGCAGCCACTaGCGCCTCAGCGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAASRSH*RLSAAT
Trigger: AGTGGCGGCGCTGAGGCGCCAGTGGCTGCGGGACGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCGTCCCGCAGCCACTaGCGCCTCAGCGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRASRSH*RLSAAT
Trigger: AGTGGCGGCGCTGAGGCGCCAGTGGCTGCGGGACGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCGCTTCTCACGCACCTaGGCGCGCACCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRFSRT*ARTSAT
Trigger: GGTGGCCGAGGTGCGCGCCCAGGTGCGTGAGAAGCG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCCAGAAGGGCCGCCTaGCGCGGCTCCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASRRAA*RGSSAC
Trigger: GCAGGCGCTGGAGCCGCGCCAGGCGGCCCTTCTGGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCAGAAGGGCCGCCTaGCGCGGCTCCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSRRAA*RGSSAC
Trigger: GCAGGCGCTGGAGCCGCGCCAGGCGGCCCTTCTGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCAGCAGCGCCTCGCTaGCCGCCACGATGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPAAPR*PPRCEH
Trigger: ATGCTCGCATCGTGGCGGCCAGCGAGGCGCTGCTGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGCAGCGCCCGGCACTaGCGCGACAGCTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSSARH*RDSCAM
Trigger: CATCGCGCAGCTGTCGCGCCAGTGCCGGGCGCTGCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCACATGCTCAAAGTCCTaGCCGAGCTCGGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTTCSKS*PSSGEP
Trigger: TGGCTCACCCGAGCTCGGCCAGGACTTTGAGCATGT...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGAGGCGGCCAGCAGCTaGGCCCGTGTGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVEAASS*ARVPMS
Trigger: GCTCATGGGCACACGGGCCCAGCTGCTGGCCGCCTC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCAGGGGCGCCGCCTTaGCCGCCAGTTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRAGAPP*PPVPWG
Trigger: ACCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCAGGGGCGCCGCCTTaGCCGCCAGTTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAGAPP*PPVPWG
Trigger: ACCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCGGGCTTGAGCTCCTaGCGCACATACCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSGLSS*RTYPTR
Trigger: TCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCGGTCAATGCGCGGCTaGAGGCGCTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCAGGCCGCCGCCTCCTaGGCAGCTCCTCCGCGCGAT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRQAAAS*AAPPRD
Trigger: ATCGCGCGGAGGAGCTGCCCAGGAGGCGGCGGCCTG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCAGGCCGCCGCCTCCTaGGCAGCTCCTCCGCGCGAT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAQAAAS*AAPPRD
Trigger: ATCGCGCGGAGGAGCTGCCCAGGAGGCGGCGGCCTG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTTGGGCAGGCGACCTaGGGGAAGCTCGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSVGQAT*GKLAWL
Trigger: CAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAAC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR CAA 72 bp TCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTCCTaGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: SSSRSCATWCNS*EASSKRRRSCN
Trigger: GTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCTGGACGACGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTTCCAGGAGCCGCGTaGGCACGAAGCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLPGAA*ARSRPG
Trigger: TCCGGGACGGCTTCGTGCTCACGCGGCTCCTGGAAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCACGCGGTTGCAGATaGCCTGCGGGTCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSRGCR*PAGRRA
Trigger: AGCCCTGCGACCCGCAGGTCATCTGCAACCGCGTGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGGTTCCACCTGCTGTTaGGGTGGTCCTGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRGSTCC*GGPGRN
Trigger: GTTCCTGCCAGGACCACCTCAACAGCAGGTGGAACC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTGGTTCCACCTGCTGTTaGGGTGGTCCTGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLAGSTCC*GGPGRN
Trigger: GTTCCTGCCAGGACCACCTCAACAGCAGGTGGAACC...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAGTGGCAGCCGCTCCTaGACCCATGCCCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSGSRS*THAQLV
Trigger: GACGAGCTGGGCATGGGTTCAGGAGCGGCTGCCACT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS-3UTR TCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTTACAGGCGGTCCACCTaGGACTGCCGCCGGCTGATC +
Preference number: 4 (lower is better)
Translates to: APEPMPARRPGRAPPGATYRRST*DCRRLI
Trigger: GATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTA...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCTCACCCAGCTCCTTaGGCGCCACGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPHPAP*APRTGG
Trigger: ACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCACTCGCTGGCAAACTCTaGGAATTTCTCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AGDLGEARVAEAATAQQALAGKL*EFLLQH
Trigger: GTGCTGCAGGAGAAATTCTCAGAGTTTGCCAGCGAG...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGAGGCGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVGGARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCTCCGCGCGATCAGCTaGCTCCTGGCGCTCCGGTCG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGALRAIS*LLALRS
Trigger: CGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGAG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGGAAGCTCGCGTGGCTaGGGCAGCGACGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLGSSRG*GSDGPA
Trigger: TGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGGCCTTGTGCAGGCTaGGCAGCGGTTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSWPCAG*AAVPHR
Trigger: ACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCGTCGCTGTCTCCGCTaGTCGCCGCGACCGACCGCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRRRCLR*SPRPTA
Trigger: GGCGGTCGGTCGCGGCGAGCAGCGGAGACAGCGACG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGCCTGGGCAGCTaGTCCCCAGACAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSVGLGS*SPDSTS
Trigger: GGAAGTGCTGTCTGGGGAGCAGCTGCCCAGGCCCAC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGTGAGTGGATCCGCATaGGGCCGCGCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAVSGSA*GRAWAW
Trigger: CCAGGCCCACGCGCGGCCGCATGCGGATCCACTCAC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGGTGCTGCTCAGCTGTaGGGAAGGCTCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRGAAQL*GRLSAG
Trigger: ACCTGCAGAGAGCCTTCCGCACAGCTGAGCAGCACC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCCAGCCCCAGGTGCTaGTCAGCTGTGCGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLASPRC*SAVRKA
Trigger: AGCCTTCCGCACAGCTGAGCAGCACCTGGGGCTGGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCGCGCCAGCCCCAGGTaGTGCTCAGCTGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRASPR*CSAVRK
Trigger: CTTCCGCACAGCTGAGCAGCACCTGGGGCTGGCGCG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGCAGCCTCCCGCTCATaGTCAGCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRAASRS*SAFSSS
Trigger: TGAGCTGGAGAAGGCTGAGCATGAGCGGGAGGCTGC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCCTCCACCAGGTGCTaGCCACACTCCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVASTRC*PHSRDS
Trigger: GCTGTCCCGGGAGTGTGGGCAGCACCTGGTGGAGGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCCGCCAGGCAGCCGTaGACGTGGTTCACGCGGTTG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSARQP*TWFTRL
Trigger: CAACCGCGTGAACCACGTGCACGGCTGCCTGGCGGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCGTCGCCGCGCTGCCTaGTCCTGCAGCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRRRRAA*SCSSAR
Trigger: CCTGGCGGAGCTGCAGGAGCAGGCAGCGCGGCGACG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCAGGAGGCGCGCTGTaGTGGACAGGTCATGCGCGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPGGAL*WTGHAR
Trigger: GCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCGCCCAGCTCGCCCTaGAGGATCTTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPPSSP*RILCWA
Trigger: GGCCCAGCACAAGATCCTGCAGGGCGAGCTGGGCGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACACCGCAGGGCCTGCTaGAGCAACGCTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIHRRAC*SNARRP
Trigger: CGGGCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCAGGTGCACGGTGTCTaGTCCCGGGCCGACGGCACC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAQVHGV*SRADGT
Trigger: GGTGCCGTCGGCCCGGGAGCAGACACCGTGCACCTG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCAGGTGCACGGTGTCTaGTCCCGGGCCGACGGCACC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLQVHGV*SRADGT
Trigger: GGTGCCGTCGGCCCGGGAGCAGACACCGTGCACCTG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCCAGGCCTACCAGGTaGACGGTGTCTGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVARPTR*TVSAPG
Trigger: CCCGGGAGCAGACACCGTGCACCTGGTAGGCCTGGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCCTCTTCCAGCCTCTaGCAGCGGCGCCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRASSSL*QRRRAL
Trigger: GAGCGCCCGGCGCCGCTGGCAGAGGCTGGAAGAGGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCACCACCAGTGGCCCTaGGCCACTGGCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAHHQWP*ATGTPE
Trigger: CTCGGGGGTGCCAGTGGCGCAGGGCCACTGGTGGTG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCCACCACGCGCACCTaGAGCGCCACCACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSTTRT*SATTSG
Trigger: GCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGCACCTCGCCAAACATaGGGTAGACAGCGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRAPRQT*GRQRAR
Trigger: ACGCGCTCGCTGTCTACCGCATGTTTGGCGAGGTGC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACTCTCGAATCGGTGCTaGACCACCTCGACGTCGTCG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLSNRC*TTSTSS
Trigger: CGACGACGTCGAGGTGGTGCAGCACCGATTCGAGAG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCATGTAGGAAGCGCTaGAGGCGCCCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSCRKR*RRPAAA
Trigger: GGCGGCAGCAGGGCGCCTGCAGCGCTTCCTACATGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCACCGATTCCACTGTaGCCGGGAGCTCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPPIPL*PGAPHQ
Trigger: CTGGTGCGGAGCTCCCGGGCACAGTGGAATCGGTGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCACCGATTCCACTGTaGCCGGGAGCTCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPPIPL*PGAPHQ
Trigger: CTGGTGCGGAGCTCCCGGGCACAGTGGAATCGGTGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLGCPPA*HPAPSA
Trigger: TGCTGATGGCGCGGGATGGCACGCGGGAGGACAACC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACAGCTCGGCCATGAATaGCTGGTGCCGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRQLGHE*LVPEPS
Trigger: AGATGGCTCCGGCACCAGGCATTCATGGCCGAGCTG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGCCGCCGTCTGCGCCTaGAGCTCTCCCACCTCGCGG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIAAVCA*SSPTSR
Trigger: CCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGCCGCCGTCTGCGCCTaGAGCTCTCCCACCTCGCGG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQAAVCA*SSPTSR
Trigger: CCGCGAGGTGGGAGAGCTGCAGGCGCAGACGGCGGC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCCAGGCGCGGCCCATaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSRRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCGCATGGGCCGCGCCTGGA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCGGCGCACTGCCTCTaGCTCCGGGCTGCGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNPAHCL*LRAAQR
Trigger: TCGCTGCGCAGCCCGGAGGCAGAGGCAGTGCGCCGG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGCGGCGTCCAGCACCTaGTGCCGTCGCTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQAASST*CRRSAA
Trigger: GGCTGCCGAGCGACGGCAGCAGGTGCTGGACGCCGC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGCCGCCGGCTGATCTaGTCGCTGTCCGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLCRRLI*SLSGCP
Trigger: GGGGCACCCGGACAGCGAGCAGATCAGCCGGCGGCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGCTCTCAGGGTCCGCTaGATGGAACTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRALRVR*MELALG
Trigger: ACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGGGCCGCCCCCTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAGGGGGCGGCCCA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGGGCCGCCCCCTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAGGGGGCGGCCCA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGCCCTGCAGCACCTCCTaGTCCCGGCTAGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLPCSTS*SRLAMA
Trigger: GGCCATCGCTAGCCGGGAGCAGGAGGTGCTGCAGGG...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGCTCTTTCCAACCCTaGAGCACCTCCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSSFQP*STSCSR
Trigger: CCGGGAGCAGGAGGTGCTGCAGGGTTGGAAAGAGCT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCCAGCTCCCGGCTCTaGAGGAGCGGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPSSRL*RSGSWA
Trigger: AGCCCAGGAGCCGCTCCTGCAGAGCCGGGAGCTGGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCCAGCTCCCGGCTCTaGAGGAGCGGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPSSRL*RSGSWA
Trigger: AGCCCAGGAGCCGCTCCTGCAGAGCCGGGAGCTGGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTCCTCATCCACGCTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: APEPMPARRPGRAPPGATPHPRC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGG...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCTCATCCACGCTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPHPRC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCACCTCATCCACGCTaGTGCCCAGCTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPPHPR*CPAPGS
Trigger: AGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGGTGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTGTGTGCCGCCTCGTaGTCCGCTGACTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLCAAS*SADSCR
Trigger: GCGGCAGGAGTCAGCGGAGCACGAGGCGGCACACAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATCGTCGAGCTCGCGCTTaGGCAGTAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDRRARA*AVGSPR
Trigger: ACGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACG...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGTTCCCCACCGTGTGTaGTCCCGGATGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVVPHRV*SRMPGP
Trigger: AGGGCCCGGCATCCGGGAGCACACACGGTGGGGAAC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCAGCGGGCGATCTCTaGGTGTTCCGCCACCGAGGA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPAGDL*VFRHRG
Trigger: TCCTCGGTGGCGGAACACGCAGAGATCGCCCGCTGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCAGCGGGCGATCTCTaGGTGTTCCGCCACCGAGGA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPAGDL*VFRHRG
Trigger: TCCTCGGTGGCGGAACACGCAGAGATCGCCCGCTGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACAGCGGGCGGGCGGGTaGTCGCCCCTCAACTGCGAC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQQRAGG*SPLNCD
Trigger: GTCGCAGTTGAGGGGCGAGCACCCGCCCGCCCGCTG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGTTGTCCACTTCCCCTaGTACCTGCGCCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRVVHFP*YLRHRG
Trigger: TCCCCGATGGCGCAGGTACCAGGGGAAGTGGACAAC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGGCCCACGGTGCGGTaGATCCAGGCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRPTVR*IQASSS
Trigger: TGAGCTGCTGGCCTGGATCCACCGCACCGTGGGCCT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCCACCCGCTCGCTCTaGGCGGCAATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSTRSL*AAMSPS
Trigger: GGAGGGAGACATTGCCGCCCAGAGCGAGCGGGTGGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGGCAGCCGTGCACGTaGTTCACGCGGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRQPCT*FTRLQM
Trigger: CATCTGCAACCGCGTGAACCACGTGCACGGCTGCCT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCGCCAGGCGGCGGCTaGAAGCTTCGTCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRAPGGG*KLRRGR
Trigger: TCGGCCACGACGAAGCTTCCAGCCGCCGCCTGGCGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACCGAGTGTCGCCAGCTaGCGCCGCAGGCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIPSVAS*RRRPLT
Trigger: CGTGAGCGGCCTGCGGCGCCAGCTGGCGACACTCGG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGTGGCCCTGCGCCACTaGCACCCCCGAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLVALRH*HPRVSP
Trigger: TGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCCAC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCGTGGCCCTGCGCCACTaGCACCCCCGAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISVALRH*HPRVSP
Trigger: TGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCCAC...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGCGTCCCGCAGCCACTaGCGCCTCAGCGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIASRSH*RLSAAT
Trigger: AGTGGCGGCGCTGAGGCGCCAGTGGCTGCGGGACGC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCGTCCCGCAGCCACTaGCGCCTCAGCGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRASRSH*RLSAAT
Trigger: AGTGGCGGCGCTGAGGCGCCAGTGGCTGCGGGACGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGCTTCTCACGCACCTaGGCGCGCACCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRFSRT*ARTSAT
Trigger: GGTGGCCGAGGTGCGCGCCCAGGTGCGTGAGAAGCG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCTCTTCTAGGCTGTTaGGCAGGGGCCCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPLLGC*AGAPRC
Trigger: GCAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCCTTGAGCGCAGCGTaGCGCGCCAGCAGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASLSAA*RASSAS
Trigger: GGACGCGCTGCTGGCGCGCCACGCTGCGCTCAAGGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACAGCCATCCAGCTCGTaGCAGTCTCGGAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRQPSSS*QSRRKC
Trigger: GCACTTCCTCCGAGACTGCCACGAGCTGGATGGCTG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCCGTGCCTTGGCCTaGGTGGTGCTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCRALA*VVLSSS
Trigger: GGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACAGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRQSCAT*CNSLEA
Trigger: GGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACTG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGCAGCGCCCGGCACTaGCGCGACAGCTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSSARH*RDSCAM
Trigger: CATCGCGCAGCTGTCGCGCCAGTGCCGGGCGCTGCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCAGCGCCCGGCACTaGCGCGACAGCTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSSARH*RDSCAM
Trigger: CATCGCGCAGCTGTCGCGCCAGTGCCGGGCGCTGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGCAGCGCCCGGCACTaGCGCGACAGCTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASSARH*RDSCAM
Trigger: CATCGCGCAGCTGTCGCGCCAGTGCCGGGCGCTGCT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCATGGAACTGGCACTaGGTCTCGGCTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLAWNWH*VSAQAG
Trigger: CCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCCGCTGCATGGAACTaGCACTGGGTCTCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSAAWN*HWVSAQ
Trigger: CTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACTGATGACACGTCCCTaGGCTTGTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLMTRP*ACRLPQ
Trigger: TTGGGGCAGCCGACAAGCCCAGGGACGTGTCATCAG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGCCAGCTCCTGGCAGGTaGTCAGCTCAGGCACCCGCG +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLPAPGR*SAQAPA
Trigger: CGCGGGTGCCTGAGCTGACCACCTGCCAGGAGCTGG...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGCCTCCTGGGCAAACTaGTGCACCTCCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRASWAN*CTSSIC
Trigger: GCAGATGCTGGAGGTGCACCAGTTTGCCCAGGAGGC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTTGCGCCCCAGCAGTaGGGTAGGCGGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLAPQQ*GRRLLA
Trigger: AGCAAGCAGCCGCCTACCCCACTGCTGGGGCGCAAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATGGCCGCCAGTTCCGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRWPPVP*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACGGAACTGGCGGCCA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCGATCAGCTGACTCCTaGCGCTCCGGTCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRSADS*RSGRGR
Trigger: GCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCCAGCAGGCAGCCCTaGGCCTGCCTCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPSRQP*ACLFLL
Trigger: CAGGAGAAAGAGGCAGGCCCAGGGCTGCCTGCTGGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGTTGGGCAGGCGACCTaGGGGAAGCTCGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVVGQAT*GKLAWL
Trigger: CAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAAC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCAGCTCAAGCCCGTTaGGCAGGCGACCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLAAQAR*AGDLGE
Trigger: TTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCTGCACTGTGTGAGTaGGCGGTGGCGGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLAALCE*AVAEAR
Trigger: CCGCGCCTCCGCCACCGCCCACTCACACAGTGCAGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCTTCCAGGAGCCGCGTaGGCACGAAGCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRLPGAA*ARSRPG
Trigger: TCCGGGACGGCTTCGTGCTCACGCGGCTCCTGGAAG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCCCGGGACAGCAGCTaGGCCTGCATCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSRDSS*ACISSI
Trigger: GATGGAGGAGATGCAGGCTCAGCTGCTGTCCCGGGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGCAGGGCAGCGGCATTaGGAGCCTCCACCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIAGQRH*EPPPAR
Trigger: GCGAGCGGGTGGAGGCTCTCAATGCCGCTGCCCTGC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCAGGGCAGCGGCATTaGGAGCCTCCACCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAGQRH*EPPPAR
Trigger: GCGAGCGGGTGGAGGCTCTCAATGCCGCTGCCCTGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCCTCGCCGCAGGCCTaGGCCGCGCTAGCTAGCGCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSASPQA*AALASA
Trigger: CGCGCTAGCTAGCGCGGCTCAGGCCTGCGGCGAGGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCCTCGCCGCAGGCCTaGGCCGCGCTAGCTAGCGCG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTASPQA*AALASA
Trigger: CGCGCTAGCTAGCGCGGCTCAGGCCTGCGGCGAGGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGGTCCACCTCCTCCTTaGGCGCAGCGTGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIGPPPP*AQRGAP
Trigger: TGGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATGTCCTCACTCATCATaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRCPHSS*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCCTCAATCTGTCCCTaGAGCTCTCGGGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSSICP*SSRASL
Trigger: CAGTGACGCCCGAGAGCTTCAGGGACAGATTGAGGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGCGTCGGCTGTGGAGCTaGCATGCAGGCGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLRRLWS*HAGGHP
Trigger: AGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACG...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGCGCCGCAGAGAGCTaGACCTCTCTTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVGAAES*TSLPRL
Trigger: CAGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACTCCGCGCGATCAGCTaGCTCCTGGCGCTCCGGTCG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCILRAIS*LLALRS
Trigger: CGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGAG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGCCTCGTGCTCCGCTaGCTCCTGCCGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRLVLR*LLPLRP
Trigger: CGGCCGGAGCGGCAGGAGTCAGCGGAGCACGAGGCG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCGCCTCGTGCTCCGCTaGCTCCTGCCGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVRLVLR*LLPLRP
Trigger: CGGCCGGAGCGGCAGGAGTCAGCGGAGCACGAGGCG...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGGAAGCTCGCGTGGCTaGGGCAGCGACGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRGSSRG*GSDGPA
Trigger: TGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCGTGCTGCACTGTGTaGGTGGGCGGTGGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSCCTV*VGGGGG
Trigger: GCCTCCGCCACCGCCCACTCACACAGTGCAGCACGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGGCCTTGTGCAGGCTaGGCAGCGGTTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVWPCAG*AAVPHR
Trigger: ACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTAACCGCATGGCTCTaGGGCGGCGGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLTAWL*GGGVQG
Trigger: CCCCTGCACTCCGCCGCCTCAGAGCCATGCGGTTAA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGTGAGTGGATCCGCATaGGGCCGCGCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRVSGSA*GRAWAW
Trigger: CCAGGCCCACGCGCGGCCGCATGCGGATCCACTCAC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCCAGGTGCACGCGCTaGTCCTTCAGAAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSRCTR*SFRNCS
Trigger: GCTGCAGTTTCTGAAGGAGCAGCGCGTGCACCTGGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCCAGCCCCAGGTGCTaGTCAGCTGTGCGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVASPRC*SAVRKA
Trigger: AGCCTTCCGCACAGCTGAGCAGCACCTGGGGCTGGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGCGCCAGCCCCAGGTaGTGCTCAGCTGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRASPR*CSAVRK
Trigger: CTTCCGCACAGCTGAGCAGCACCTGGGGCTGGCGCG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCCTCCACCAGGTGCTaGCCACACTCCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLASTRC*PHSRDS
Trigger: GCTGTCCCGGGAGTGTGGGCAGCACCTGGTGGAGGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCTGCCTCCACCAGGTaGTGCCCACACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSASTR*CPHSRD
Trigger: GTCCCGGGAGTGTGGGCAGCACCTGGTGGAGGCAGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTGCAACAGGTCGTCTaGCTCCACCAGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLQQVV*LHQVLP
Trigger: GGGCAGCACCTGGTGGAGGCAGACGACCTGTTGCAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGTCCGCCAGGCAGCCGTaGACGTGGTTCACGCGGTTG +
Preference number: 4 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSSARQP*TWFTRL
Trigger: CAACCGCGTGAACCACGTGCACGGCTGCCTGGCGGA...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCCTCCTCCAGCTCCTaGAGCAGCGCCCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRASSSS*SSAHRL
Trigger: GAGCCTGTGGGCGCTGCTGCAGGAGCTGGAGGAGGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCAGGAGGCGCGCTGTaGTGGACAGGTCATGCGCGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPGGAL*WTGHAR
Trigger: GCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCAGGAGGCGCGCTGTaGTGGACAGGTCATGCGCGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPGGAL*WTGHAR
Trigger: GCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCGCCCAGCTCGCCCTaGAGGATCTTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPPSSP*RILCWA
Trigger: GGCCCAGCACAAGATCCTGCAGGGCGAGCTGGGCGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTCACCGCAGGGCCTGCTaGAGCAACGCTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: IFSIVVRRRRELNLSSQAHRRAC*SNARRP
Trigger: CGGGCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTG...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCAGGTGCACGGTGTCTaGTCCCGGGCCGACGGCACC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRQVHGV*SRADGT
Trigger: GGTGCCGTCGGCCCGGGAGCAGACACCGTGCACCTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACAGGTGCACGGTGTCTaGTCCCGGGCCGACGGCACC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIQVHGV*SRADGT
Trigger: GGTGCCGTCGGCCCGGGAGCAGACACCGTGCACCTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGAAGTCACCGGCGGCTaGCAGGCGGTAAGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAEVTGG*QAVSVA
Trigger: CGCGACGCTTACCGCCTGGCAGCCGCCGGTGACTTC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAAGTCACCGGCGGCTaGCAGGCGGTAAGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLEVTGG*QAVSVA
Trigger: CGCGACGCTTACCGCCTGGCAGCCGCCGGTGACTTC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCACGGGCCCGCGATGTaGCTCCACCTCCCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRHGPAM*LHLPGE
Trigger: CTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCACCACCAGTGGCCCTaGGCCACTGGCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRHHQWP*ATGTPE
Trigger: CTCGGGGGTGCCAGTGGCGCAGGGCCACTGGTGGTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAACCTCAGCGAACAACTaGTCTGCTTCCACCACGCGC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRTSANN*SASTTR
Trigger: GCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATGCACCTCGCCAAACATaGGGTAGACAGCGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDAPRQT*GRQRAR
Trigger: ACGCGCTCGCTGTCTACCGCATGTTTGGCGAGGTGC...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATAGGCTCTCGAATCGGTaGTGCACCACCTCGACGTCG +
Preference number: 4 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDRLSNR*CTTSTS
Trigger: CGACGTCGAGGTGGTGCAGCACCGATTCGAGAGCCT...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCTCAGCAGGCCCTCTaGAGCCTGCACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPQQAL*SLHGHL
Trigger: CAGGTGGCCGTGCAGGCTGCAGAGGGCCTGCTGAGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGCAGTCTCGGAGGAAGTaGTGCAGCTCAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSQSRRK*CSSSWS
Trigger: TGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTG...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVGCPPA*HPAPSA
Trigger: TGCTGATGGCGCGGGATGGCACGCGGGAGGACAACC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGTTCGGGCTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTGGCCTCAAAGAGCTaGCGTGCCTTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLASKS*RALAWV
Trigger: CACCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCAGCTGGTCTGCTTTaGTGGCCTCAAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPAGLL*WPQRAA
Trigger: GGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCACCCACCAGCTCCTTaGTCGCCGGCTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAHPPAP*SPAPAA
Trigger: TGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCGCCCACCGCGTTCTaGCGCTCACCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASPTAF*RSPTSS
Trigger: GGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCGCCCACCGCGTTCTaGCGCTCACCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSPTAF*RSPTSS
Trigger: GGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGAAGCGGCGGCGCTCCTaGAACGGCTCGAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRKRRRS*NGSSRR
Trigger: GCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAAGCGGCGGCGCTCCTaGAACGGCTCGAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIKRRRS*NGSSRR
Trigger: GCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAAGCGGCGGCGCTCCTaGAACGGCTCGAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNKRRRS*NGSSRR
Trigger: GCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCATTCTTTTTGATGTGCTaGTGGACCGCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: AGDLGEARVAEAATAQQAFFLMC*WTACKP
Trigger: CGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAA...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCAGGCGCTCTGCAGCTaGTCCAGGCCCCGGCGCACT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRQALCS*SRPRRT
Trigger: AGTGCGCCGGGGCCTGGAGCAGCTGCAGAGCGCCTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACAGGCGCTCTGCAGCTaGTCCAGGCCCCGGCGCACT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQQALCS*SRPRRT
Trigger: AGTGCGCCGGGGCCTGGAGCAGCTGCAGAGCGCCTG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCGTCCAGCACCTGCTaGCGTCGCTCGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRASSTC*RRSAAS
Trigger: GGAGGCTGCCGAGCGACGGCAGCAGGTGCTGGACGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGCGTCCAGCACCTGCTaGCGTCGCTCGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQASSTC*RRSAAS
Trigger: GGAGGCTGCCGAGCGACGGCAGCAGGTGCTGGACGC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCATGAGCAGCTCCTaGTCGCCCAGCCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLIMSSS*SPSHAS
Trigger: GGAGGCGTGGCTGGGCGAGCAGGAGCTGCTCATGAT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGCTCGCTGTCCGGGTaGCCCATCTCCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGACSLSG*PISSSA
Trigger: GGCGCTGCTGGAGATGGGGCACCCGGACAGCGAGCA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCCGCCGGCTGATCTaGTCGCTGTCCGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQCRRLI*SLSGCP
Trigger: GGGGCACCCGGACAGCGAGCAGATCAGCCGGCGGCA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTGCCGCCGGCTGATCTaGTCGCTGTCCGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRCRRLI*SLSGCP
Trigger: GGGGCACCCGGACAGCGAGCAGATCAGCCGGCGGCA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCAGCCGTTCCCGCCCTaGCATACCTGTCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVQPFPP*HTCLAG
Trigger: GCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCAGGAGCTGCAGGTCATaGTCAAAGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTRSCRS*SKALRV
Trigger: GACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCT...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCCCCCTCCTGCAGCTaGCGTACCTGGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAPSCS*RTWDTR
Trigger: CCTCGTGTCCCAGGTACGGCAGCTGCAGGAGGGGGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTGGGCCGCCCCCTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAGGGGGCGGCCCA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCCTGCAGCACCTCCTaGTCCCGGCTAGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPCSTS*SRLAMA
Trigger: GGCCATCGCTAGCCGGGAGCAGGAGGTGCTGCAGGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCCTGCAGCACCTCCTaGTCCCGGCTAGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPCSTS*SRLAMA
Trigger: GGCCATCGCTAGCCGGGAGCAGGAGGTGCTGCAGGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCTCATCCACGCTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPHPRC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCACCTCATCCACGCTaGTGCCCAGCTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPPHPR*CPAPGS
Trigger: AGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGGTGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTAGTGGGGTAGGCGGCTaGTTGCTCTGTTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLASGVGG*LLCSAL
Trigger: CAAAGCGGAACAGAGCAAGCAGCCGCCTACCCCACT...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCTGTGTGCCGCCTCGTaGTCCGCTGACTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLCAAS*SADSCR
Trigger: GCGGCAGGAGTCAGCGGAGCACGAGGCGGCACACAG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACGTCGAGCTCGCGCTTaGGCAGTAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRRARA*AVGSPR
Trigger: ACGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGTGTGTGCTCCCGGATaGCGGGCCCTTGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLVCAPG*RALGVL
Trigger: AAGGACTCCAAGGGCCCGGCATCCGGGAGCACACAC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCGCTGGTGGCCTTGTaGAGGCTGAGCAGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSLVAL*RLSSGS
Trigger: GGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGGGAGCAAAAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSGAKTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTTTTGCTCC...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGCGCCCGCTGGCCCTaGGATCTCCGCCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRCARWP*DLRLPS
Trigger: AGAGGGAAGGCGGAGATCGCAGGGCCAGCGGGCGCA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGCGCCCGCTGGCCCTaGGATCTCCGCCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLCARWP*DLRLPS
Trigger: AGAGGGAAGGCGGAGATCGCAGGGCCAGCGGGCGCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCTCAACTGGCCCCCTaGCCACCCCCATCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLAQLAP*PPPSSS
Trigger: TGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTCCAGCCAGAAGCATaGAGGGGTGGGCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLQPEA*RGGLPL
Trigger: GAGGGGAAGCCCACCCCTGCATGCTTCTGGCTGGAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGGCGGCCATGGGGACTaGCCACAACCCAATCCCCCG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLGGHGD*PQPNPP
Trigger: CGGGGGATTGGGTTGTGGGCAGTCCCCATGGCCGCC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCTCGCCCCTCAACTaGGACGGCAGCGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQCSPLN*DGSGSG
Trigger: GCCGCTGCCGCTGCCGTCGCAGTTGAGGGGCGAGCA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGGCCCACGGTGCGGTaGATCCAGGCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRPTVR*IQASSS
Trigger: TGAGCTGCTGGCCTGGATCCACCGCACCGTGGGCCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGGACGCTGTCACGCTaGGCTGCCACCCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRTLSR*AATRRI
Trigger: TATCCGGCGGGTGGCAGCCCAGCGTGACAGCGTCCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGGAGGCGCGCTGTGCTaGACAGGTCATGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIGGALC*TGHARR
Trigger: GCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCAGGATCTTGTGCTaGGCCAGGAGGCGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCRILC*ARRRAV
Trigger: CACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTGGAAGCTTCGTCGTaGCCGAAGTCACCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLEASS*PKSPAA
Trigger: AGCCGCCGGTGACTTCGGCCACGACGAAGCTTCCAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCTGGAAGCTTCGTCGTaGCCGAAGTCACCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLLEASS*PKSPAA
Trigger: AGCCGCCGGTGACTTCGGCCACGACGAAGCTTCCAG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGTGGCCCTGCGCCACTaGCACCCCCGAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIVALRH*HPRVSP
Trigger: TGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCCAC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCAGCGCCACCACCAGTaGCCCTGCGCCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRQRHHQ*PCATGT
Trigger: GGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCCCTTCCACCAGCTCCTaGACTGTGTGGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGPSTSS*TVWFTS
Trigger: GGACGTGAACCACACAGTCCAGGAGCTGGTGGAAGG...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCCTGTTGAGGTGGTCCTaGCAGGAACGCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTLLRWS*QERTSS
Trigger: AGATGAGGTGCGTTCCTGCCAGGACCACCTCAACAG...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACGCTTCTCACGCACCTaGGCGCGCACCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRFSRT*ARTSAT
Trigger: GGTGGCCGAGGTGCGCGCCCAGGTGCGTGAGAAGCG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCCTTGAGCGCAGCGTaGCGCGCCAGCAGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSLSAA*RASSAS
Trigger: GGACGCGCTGCTGGCGCGCCACGCTGCGCTCAAGGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCAGCAGCGCCTCGCTaGCCGCCACGATGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPAAPR*PPRCEH
Trigger: ATGCTCGCATCGTGGCGGCCAGCGAGGCGCTGCTGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCCTCTTATGCAGCTTGTaGTTGTCCTCCCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTLLCSL*LSSRVP
Trigger: TGGCACGCGGGAGGACAACCACAAGCTGCATAAGAG...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAGCAGCGCCCGGCACTaGCGCGACAGCTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSSARH*RDSCAM
Trigger: CATCGCGCAGCTGTCGCGCCAGTGCCGGGCGCTGCT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRTWRLS*YSQYCC
Trigger: ACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAACATGCTCAAAGTCCTaGCCGAGCTCGGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRTCSKS*PSSGEP
Trigger: TGGCTCACCCGAGCTCGGCCAGGACTTTGAGCATGT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGAGGCGGCCAGCAGCTaGGCCCGTGTGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIEAASS*ARVPMS
Trigger: GCTCATGGGCACACGGGCCCAGCTGCTGGCCGCCTC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGAGGCGGCCAGCAGCTaGGCCCGTGTGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNEAASS*ARVPMS
Trigger: GCTCATGGGCACACGGGCCCAGCTGCTGGCCGCCTC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCAGCTCCTGGCAGGTaGTCAGCTCAGGCACCCGCG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPAPGR*SAQAPA
Trigger: CGCGGGTGCCTGAGCTGACCACCTGCCAGGAGCTGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCTGCAGCCACTCCCAATaGCGGTCCCACTTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGCSHSQ*RSHFSD
Trigger: GTCGGAAAAGTGGGACCGCCATTGGGAGTGGCTGCA...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTTGCGCCCCAGCAGTaGGGTAGGCGGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLAPQQ*GRRLLA
Trigger: AGCAAGCAGCCGCCTACCCCACTGCTGGGGCGCAAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCGGGCTTGAGCTCCTaGCGCACATACCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSGLSS*RTYPTR
Trigger: TCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCGGTCAATGCGCGGCTaGAGGCGCTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGATCAGCTGACTCCTaGCGCTCCGGTCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRSADS*RSGRGR
Trigger: GCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCCAGCAGGCAGCCCTaGGCCTGCCTCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPSRQP*ACLFLL
Trigger: CAGGAGAAAGAGGCAGGCCCAGGGCTGCCTGCTGGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTGGGGGAAGCTCGCGTaGCTGAGGCAGCGACGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRWGKLA*LRQRRP
Trigger: GGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GAGGCCGCCAGTTCGGGCTTCTCCTGCATCAGTTGCTGGCCCTCCCGCTCGATCCGGATGCCGGGCCCTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: EAASSGFSCISCWPSRSIRMPGP*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCG...GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GAGGCCGCCAGTTCGGGCTTCTCCTGCATCAGTTGCTGGCCCTCCCGCTCGATCGTAGTGGGTAGTGTCTaGCCCCAGCGGGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: EAASSGFSCISCWPSRSIVVGSV*PQRAIS
Trigger: AGAGATCGCCCGCTGGGGCCAGACACTACCCACTAC...GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGACTTCCTGCGCCCGCTaGCCCTGCGATCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVTSCAR*PCDLRL
Trigger: AAGGCGGAGATCGCAGGGCCAGCGGGCGCAGGAAGT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAACCACCCCAGCTTCTTaGGGCAGGATCTGCAGATCG +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRTTPAS*GRICRS
Trigger: CGATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTGGATCTGGGGAGGTCTaGGGGTTCCCAAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPGSGEV*GFPRRV
Trigger: CACCCTCCTTGGGAACCCCCAGACCTCCCCAGATCC...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGCGTAACTGGTTTTCTTaGTTCCTGTGCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WAGDLGEARVAEAATAQQRNWFS*FLCLAS
Trigger: AGAGGCCAGGCACAGGAACCAAGAAAACCAGTTACG...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 72 bp GCCTGGTGCCGGAGCCATCTCTTATGCAGCTTGTGGTaGTCCTCCCGCGTGCCATCCCGCGCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: AWCRSHLLCSLW*SSRVPSRAISI
Trigger: GATGCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATGGCTCCGGCACCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACAGAGCATCCTTGGCTaGGCGTGTCTCTCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRQSILG*ACLSVV
Trigger: GACAACAGAGAGACACGCTCAGCCAAGGATGCTCTG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCCCGGGACAGCAGCTaGGCCTGCATCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSRDSS*ACISSI
Trigger: GATGGAGGAGATGCAGGCTCAGCTGCTGTCCCGGGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTCGACGTCGTCGAGTaGATCCGGCACACGCATGGA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLDVVE*IRHTHG
Trigger: TCCATGCGTGTGCCGGATTCACTCGACGACGTCGAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGGTTCCACCTGCTGTTaGGGTGGTCCTGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLGSTCC*GGPGRN
Trigger: GTTCCTGCCAGGACCACCTCAACAGCAGGTGGAACC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCAGCCACTCCTTATTCTaGGCCAGCTCGGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTSHSLF*ASSAMN
Trigger: ATTCATGGCCGAGCTGGCTCAGAATAAGGAGTGGCT...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGTGGCAGCCGCTCCTaGACCCATGCCCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASGSRS*THAQLV
Trigger: GACGAGCTGGGCATGGGTTCAGGAGCGGCTGCCACT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS-3UTR TCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATTGTCCTCACTCATCATaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDCPHSS*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACA...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGAGACTGCCGCCGGCTaGTCTGCTCGCTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQETAAG*SARCPG
Trigger: ACCCGGACAGCGAGCAGATCAGCCGGCGGCAGTCTC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTACAGGCGGTCCACCTaGGACTGCCGCCGGCTGATC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAYRRST*DCRRLI
Trigger: GATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCTCACCCAGCTCCTTaGGCGCCACGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPHPAP*APRTGG
Trigger: ACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCTCACCCAGCTCCTTaGGCGCCACGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPHPAP*APRTGG
Trigger: ACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCTCACTGAAGAACTTATaGAGCTCCCGAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGSLKNL*SSREAA
Trigger: GGCCGCCTCTCGGGAGCTTCATAAGTTCTTCAGTGA...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCGTCGGCTGTGGAGCTaGCATGCAGGCGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGARRLWS*HAGGHP
Trigger: AGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCGTCGGCTGTGGAGCTaGCATGCAGGCGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRRLWS*HAGGHP
Trigger: AGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGTCGGCTGTGGAGCTaGCATGCAGGCGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRRLWS*HAGGHP
Trigger: AGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGGAGGCGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRGGARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGGCCTTGTGCAGGCTaGGCAGCGGTTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRWPCAG*AAVPHR
Trigger: ACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGGCAGCATTGGAAGTaGGGTAAAGGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRQHWK*GKGGEG
Trigger: CCCCTCCCCGCCTTTACCTCACTTCCAATGCTGCCT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTTAACCGCATGGCTCTaGGGCGGCGGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLTAWL*GGGVQG
Trigger: CCCCTGCACTCCGCCGCCTCAGAGCCATGCGGTTAA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACGCCATCGGGGAAGGTaGGGCTCAGAGGATGACACA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRHRGR*GSEDDT
Trigger: TGTGTCATCCTCTGAGCCTCACCTTCCCCGATGGCG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000392025.5
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGTGGCAGCCGCTCCTaGACCCATGCCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASGSRS*THASSS
Trigger: CGACGAGCTGGCATGGGTTCAGGAGCGGCTGCCACT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGTCGCTGTCTCCGCTaGTCGCCGCGACCGACCGCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRRCLR*SPRPTA
Trigger: GGCGGTCGGTCGCGGCGAGCAGCGGAGACAGCGACG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAAAGAGCGAGGCCGCTaGGGTGGACGCAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIKERGR*GGRSRL
Trigger: CAGCCGGCTGCGTCCACCGCAGCGGCCTCGCTCTTT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCCAGCCCCAGGTGCTaGTCAGCTGTGCGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLASPRC*SAVRKA
Trigger: AGCCTTCCGCACAGCTGAGCAGCACCTGGGGCTGGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCCTTCGGCTGCCAATaGCTGGGCCAGCTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAFGCQ*LGQLRH
Trigger: GTGGCGGAGCTGGCCCAGGCATTGGCAGCCGAAGGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGTAGTAGCCTTCGGCTaGCAATGCCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLVVAFG*QCLGQL
Trigger: GAGCTGGCCCAGGCATTGGCAGCCGAAGGCTACTAC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCAGGGCAAGGTTCTaGTCAAGTCGTGTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCRARF*SSRVRR
Trigger: CCGGCGGACACGACTTGAGCAGAACCTTGCCCTGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCTGCCTCCACCAGGTaGTGCCCACACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSASTR*CPHSRD
Trigger: GTCCCGGGAGTGTGGGCAGCACCTGGTGGAGGCAGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTGCAACAGGTCGTCTaGCTCCACCAGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLQQVV*LHQVLP
Trigger: GGGCAGCACCTGGTGGAGGCAGACGACCTGTTGCAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACCCTCCAGCAGTCCATaGTTCTGCAACAGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRPSSSP*FCNRSS
Trigger: AGACGACCTGTTGCAGAAGCATGGACTGCTGGAGGG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCCGCCAGGCAGCCGTaGACGTGGTTCACGCGGTTG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSARQP*TWFTRL
Trigger: CAACCGCGTGAACCACGTGCACGGCTGCCTGGCGGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCGCCAGGCAGCCGTaGACGTGGTTCACGCGGTTG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSARQP*TWFTRL
Trigger: CAACCGCGTGAACCACGTGCACGGCTGCCTGGCGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGTTCTTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCCGCGCTGCCTGCTCCTaGAGCTCCGCCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: WFFLMCCWTACKPLPRSVRAACS*SSARQP
Trigger: CGGCTGCCTGGCGGAGCTGCAGGAGCAGGCAGCGCG...GACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGTCGCCGCGCTGCCTaGTCCTGCAGCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRRRAA*SCSSAR
Trigger: CCTGGCGGAGCTGCAGGAGCAGGCAGCGCGGCGACG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCACCGCAGGGCCTGCTaGAGCAACGCTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSHRRAC*SNARRP
Trigger: CGGGCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACACCGCAGGGCCTGCTaGAGCAACGCTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHRRAC*SNARRP
Trigger: CGGGCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGGCCTCTTCCAGCCTCTaGCAGCGGCGCCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQASSSL*QRRRAL
Trigger: GAGCGCCCGGCGCCGCTGGCAGAGGCTGGAAGAGGC...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCCTCTTCCAGCCTCTaGCAGCGGCGCCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSASSSL*QRRRAL
Trigger: GAGCGCCCGGCGCCGCTGGCAGAGGCTGGAAGAGGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCCACCACGCGCACCTaGAGCGCCACCACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISTTRT*SATTSG
Trigger: GCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATAGCGAACAACTGCTCTaGTTCCACCACGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDSEQLL*FHHAHL
Trigger: CAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCT...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCACCTCGCCAAACATaGGGTAGACAGCGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSAPRQT*GRQRAR
Trigger: ACGCGCTCGCTGTCTACCGCATGTTTGGCGAGGTGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCTCTCGAATCGGTGCTaGACCACCTCGACGTCGTCG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLLSNRC*TTSTSS
Trigger: CGACGACGTCGAGGTGGTGCAGCACCGATTCGAGAG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAGGCTCTCGAATCGGTaGTGCACCACCTCGACGTCG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRLSNR*CTTSTS
Trigger: CGACGTCGAGGTGGTGCAGCACCGATTCGAGAGCCT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGCGGCTCCAGCGCCTaGAGAGCGGCCTCTAGGCCG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRGSSA*RAASRP
Trigger: CGGCCTAGAGGCCGCTCTGCAGGCGCTGGAGCCGCG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCATGTAGGAAGCGCTaGAGGCGCCCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSCRKR*RRPAAA
Trigger: GGCGGCAGCAGGGCGCCTGCAGCGCTTCCTACATGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCTCATGTAGGAAGCGCTaGAGGCGCCCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISSCRKR*RRPAAA
Trigger: GGCGGCAGCAGGGCGCCTGCAGCGCTTCCTACATGA...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGAAGCCGAGCAGTTTATaGCAGCCAAGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSKPSSL*QPSSRC
Trigger: ACACCTCGAACTTGGCTGGCATAAACTGCTCGGCTT...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCCTGCACGGCCACCTaGATCTTTTGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSACTAT*IFCWLS
Trigger: GCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCTCCCCGTAGATGTTaGCCTGCCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVAPRRC*PASAGP
Trigger: AGGGCCTGCTGAGGCAGGGCAACATCTACGGGGAGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCAAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: AGDLGEARVAEAATAQQASFCIH*WARNWF
Trigger: AAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCT...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRGCPPA*HPAPSA
Trigger: TGCTGATGGCGCGGGATGGCACGCGGGAGGACAACC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCAGCTCGGCCATGAATaGCTGGTGCCGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLQLGHE*LVPEPS
Trigger: AGATGGCTCCGGCACCAGGCATTCATGGCCGAGCTG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GAGGCCGCCAGTTCGGGCTTCTCCTGCATCAGTTGCTGGCCCTCCCGCTCGATCTTCTCCTGCATCAGTTaGTGGCCCTCCCGCTCGATC +
Preference number: 4 (lower is better)
Translates to: EAASSGFSCISCWPSRSIFSCIS*WPSRSI
Trigger: GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAA...GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACACCCACCAGCTCCTTaGTCGCCGGCTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIHPPAP*SPAPAA
Trigger: TGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCACCCACCAGCTCCTTaGTCGCCGGCTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNHPPAP*SPAPAA
Trigger: TGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCGCCCACCGCGTTCTaGCGCTCACCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISPTAF*RSPTSS
Trigger: GGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCGCCCACCGCGTTCTaGCGCTCACCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSPTAF*RSPTSS
Trigger: GGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTCGTCGTCCAGTCGTaGGCCACCTGGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLVVQS*ATWCNS
Trigger: GGAGTTGCACCAGGTGGCGCACGACTGGACGACGAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCGCCTGCAAACCGTTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPPANR*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCGCCTGCAAACCGTTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPPANR*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCGGCGCACTGCCTCTaGCTCCGGGCTGCGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPAHCL*LRAAQR
Trigger: TCGCTGCGCAGCCCGGAGGCAGAGGCAGTGCGCCGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGTTCTTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCCCGGCGCACTGCCTCTaGCTCCGGGCTGCGCAGCGA +
Preference number: 4 (lower is better)
Translates to: WFFLMCCWTACKPLPRSVPAHCL*LRAAQR
Trigger: TCGCTGCGCAGCCCGGAGGCAGAGGCAGTGCGCCGG...GACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCGGCGTCCAGCACCTaGTGCCGTCGCTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTAASST*CRRSAA
Trigger: GGCTGCCGAGCGACGGCAGCAGGTGCTGGACGCCGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCGCGACAGCTGCGCGATaGTTTCCTCGTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGATAAR*FPRSSP
Trigger: TGGAGAACTACGAGGAAAGCATCGCGCAGCTGTCGC...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTGCTCGCTGTCCGGGTaGCCCATCTCCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNCSLSG*PISSSA
Trigger: GGCGCTGCTGGAGATGGGGCACCCGGACAGCGAGCA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCAGCCGTTCCCGCCCTaGCATACCTGTCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAQPFPP*HTCLAG
Trigger: GCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGGCCATGGTGGCCGCTaGTGTATGGCCACACTCGAT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLGHGGR*CMATLD
Trigger: ATCGAGTGTGGCCATACAGCAGCGGCCACCATGGCC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGGAGCTGCAGGTCATaGTCAAAGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRSCRS*SKALRV
Trigger: GACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGTGGGACACGAGGAGCTaGAGGTCATGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVWDTRS*RSCSKA
Trigger: AGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCA...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCCCCCTCCTGCAGCTaGCGTACCTGGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNAPSCS*RTWDTR
Trigger: CCTCGTGTCCCAGGTACGGCAGCTGCAGGAGGGGGC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCCCTGCAGCACCTCCTaGTCCCGGCTAGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRPCSTS*SRLAMA
Trigger: GGCCATCGCTAGCCGGGAGCAGGAGGTGCTGCAGGG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCCTGCAGCACCTCCTaGTCCCGGCTAGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNPCSTS*SRLAMA
Trigger: GGCCATCGCTAGCCGGGAGCAGGAGGTGCTGCAGGG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCTCTTTCCAACCCTaGAGCACCTCCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSSFQP*STSCSR
Trigger: CCGGGAGCAGGAGGTGCTGCAGGGTTGGAAAGAGCT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCTGTGGAGCTGACATaGAGGCGGGCATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSAVELT*RRASSQ
Trigger: CTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCTGGGCTTGTCGGCTaGCCCAATCTGGCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPGLVG*PNLAGD
Trigger: ATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGCCTGGGCTTGTCGGCTaGCCCAATCTGGCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLPGLVG*PNLAGD
Trigger: ATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGG...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCACCTCATCCACGCTaGTGCCCAGCTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPPHPR*CPAPGS
Trigger: AGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGGTGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGGCTGCAGCCGCTTTaGGGAAGGCCTCATGTCGCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRLQPL*GRPHVA
Trigger: GGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCGTCGAGCTCGCGCTTaGGCAGTAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRRARA*AVGSPR
Trigger: ACGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGTGTGTGCTCCCGGATaGCGGGCCCTTGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVVCAPG*RALGVL
Trigger: AAGGACTCCAAGGGCCCGGCATCCGGGAGCACACAC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGTTCCCCACCGTGTGTaGTCCCGGATGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIVPHRV*SRMPGP
Trigger: AGGGCCCGGCATCCGGGAGCACACACGGTGGGGAAC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCTCAACTGGCCCCCTaGCCACCCCCATCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVAQLAP*PPPSSS
Trigger: TGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGGCGGCCATGGGGACTaGCCACAACCCAATCCCCCG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRGGHGD*PQPNPP
Trigger: CGGGGGATTGGGTTGTGGGCAGTCCCCATGGCCGCC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTTGTCCACTTCCCCTaGTACCTGCGCCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSVVHFP*YLRHRG
Trigger: TCCCCGATGGCGCAGGTACCAGGGGAAGTGGACAAC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGGCCCACGGTGCGGTaGATCCAGGCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRPTVR*IQASSS
Trigger: TGAGCTGCTGGCCTGGATCCACCGCACCGTGGGCCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGGACGCTGTCACGCTaGGCTGCCACCCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGARTLSR*AATRRI
Trigger: TATCCGGCGGGTGGCAGCCCAGCGTGACAGCGTCCT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGTTAGCAGGGCCCACTaGCGCAGGACGCTGTCACGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLVSRAH*RRTLSR
Trigger: GCGTGACAGCGTCCTGCGCCAGTGGGCCCTGCTAAC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCCACCCGCTCGCTCTaGGCGGCAATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASTRSL*AAMSPS
Trigger: GGAGGGAGACATTGCCGCCCAGAGCGAGCGGGTGGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCCACCCGCTCGCTCTaGGCGGCAATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSTRSL*AAMSPS
Trigger: GGAGGGAGACATTGCCGCCCAGAGCGAGCGGGTGGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAGGCAGCCGTGCACGTaGTTCACGCGGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRQPCT*FTRLQM
Trigger: CATCTGCAACCGCGTGAACCACGTGCACGGCTGCCT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCGAGTGTCGCCAGCTaGCGCCGCAGGCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPSVAS*RRRPLT
Trigger: CGTGAGCGGCCTGCGGCGCCAGCTGGCGACACTCGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCACCTGCTGTTGAGGTaGTCCTGGCAGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLHLLLR*SWQERT
Trigger: GGTGCGTTCCTGCCAGGACCACCTCAACAGCAGGTG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCCAGAAGGGCCGCCTaGCGCGGCTCCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSRRAA*RGSSAC
Trigger: GCAGGCGCTGGAGCCGCGCCAGGCGGCCCTTCTGGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCTCTTCTAGGCTGTTaGGCAGGGGCCCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPLLGC*AGAPRC
Trigger: GCAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGAGCACCACGAGCGCCTaGCGTAGATCCCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLSTTSA*RRSRRK
Trigger: CTTCCTGCGGGATCTACGCCAGGCGCTCGTGGTGCT...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTGACAGCGCCATCTCCTaGTTACGCAGCACCACGAGC +
Preference number: 4 (lower is better)
Translates to: APEPMPARRPGRAPPGATDSAIS*LRSTTS
Trigger: GCTCGTGGTGCTGCGTAACCAGGAGATGGCGCTGTC...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACTCTTATGCAGCTTGTaGTTGTCCTCCCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLLCSL*LSSRVP
Trigger: TGGCACGCGGGAGGACAACCACAAGCTGCATAAGAG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCGGCCATGAATGCCTaGTGCCGGAGCCATCTCTTA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSAMNA*CRSHLL
Trigger: TAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCTCCGCCCAGCACTaGCGGATCTCGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSSAQH*RISPSF
Trigger: GAAGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGCCGTGCCTTGGCCTaGGTGGTGCTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLCRALA*VVLSSS
Trigger: GGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGAGCTGCCGTGCCTTaGCCTGGGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRAAVP*PGWCSP
Trigger: TGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTAGCAGCGCCCGGCACTaGCGCGACAGCTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: IFSIVVRRRRELNLSSQASSARH*RDSCAM
Trigger: CATCGCGCAGCTGTCGCGCCAGTGCCGGGCGCTGCT...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCAAGCTCGCTCACCTaGCGGCTGAGCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSSSLT*RLSWYS
Trigger: GCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTTCAAGCTCGCTCACCTaGCGGCTGAGCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: APEPMPARRPGRAPPGATSSSLT*RLSWYS
Trigger: GCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGA...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCATGGAACTGGCACTaGGTCTCGGCTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAWNWH*VSAQAG
Trigger: CCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCCGCTGCATGGAACTaGCACTGGGTCTCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSAAWN*HWVSAQ
Trigger: CTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCGCGGACTTGGCTGTaGAAGCGCAGGGCGTCGGCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSRTWL*KRRASA
Trigger: AGCCGACGCCCTGCGCTTCCACAGCCAAGTCCGCGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCGCGGACTTGGCTGTaGAAGCGCAGGGCGTCGGCT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSRTWL*KRRASA
Trigger: AGCCGACGCCCTGCGCTTCCACAGCCAAGTCCGCGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCAGGTCGCGGACTTaGCTGTGGAAGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSRSRT*LWKRRA
Trigger: CGCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCGGCTGCCCCAATCTaGCTGGCGATGCCATCCATC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSAAPI*LAMPSI
Trigger: GATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTGATGACACGTCCCTaGGCTTGTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLMTRP*ACRLPQ
Trigger: TTGGGGCAGCCGACAAGCCCAGGGACGTGTCATCAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGCAGGAGCGGCTCCTaGGCTGTCAGCCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVCRSGS*AVSQAS
Trigger: TGATGCCTGGCTGACAGCCCAGGAGCCGCTCCTGCA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGGCCGCCAGTTCCGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLWPPVP*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACGGAACTGGCGGCCA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCAGGGGCGCCGCCTTaGCCGCCAGTTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSAGAPP*PPVPWG
Trigger: ACCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACGGTCAATGCGCGGCTaGAGGCGCTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGCCTCCAGCCGCGCATTGACCG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCATCTCCTGTTCGCTaGACTCCTGCCGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSASPVR*TPAAPS
Trigger: GCTTGGAGCGGCAGGAGTCCAGCGAACAGGAGATGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGTTGGGCAGGCGACCTaGGGGAAGCTCGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRVGQAT*GKLAWL
Trigger: CAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAAC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCAGCTCAAGCCCGTTaGGCAGGCGACCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLAAQAR*AGDLGE
Trigger: TTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCGGATGCCGGGCCCTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRMPGP*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTACTTCCTGCGCCCGCTaGCCCTGCGATCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGATSCAR*PCDLRL
Trigger: AAGGCGGAGATCGCAGGGCCAGCGGGCGCAGGAAGT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCACTTCCTGCGCCCGCTaGCCCTGCGATCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISTSCAR*PCDLRL
Trigger: AAGGCGGAGATCGCAGGGCCAGCGGGCGCAGGAAGT...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGACTTCCTGCGCCCGCTaGCCCTGCGATCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLTSCAR*PCDLRL
Trigger: AAGGCGGAGATCGCAGGGCCAGCGGGCGCAGGAAGT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAGGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRSCAT*CNSLEA
Trigger: GGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTAGGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: APEPMPARRPGRAPPGATRSCAT*CNSLEA
Trigger: GGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCT...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCAGCTGAAGCGGCAGTaGCGTTGGCGGGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNQLKRQ*RWRGVP
Trigger: AGGGACGCCCCGCCAACGCCACTGCCGCTTCAGCTG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGCTGGCCTCTAGCTGCTaGATCTGGGGAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSLASSC*IWGGLG
Trigger: CCCCAGACCTCCCCAGATCCAGCAGCTAGAGGCCAG...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCGTGCAATAGGCCGTaGAAGCCTGGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLACNRP*KPGVAA
Trigger: AGCAGCAACTCCAGGCTTTCACGGCCTATTGCACGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCCCGGGACAGCAGCTaGGCCTGCATCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASRDSS*ACISSI
Trigger: GATGGAGGAGATGCAGGCTCAGCTGCTGTCCCGGGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCACGCGGTTGCAGATaGCCTGCGGGTCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISRGCR*PAGRRA
Trigger: AGCCCTGCGACCCGCAGGTCATCTGCAACCGCGTGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGAACGCACCTCATCTaGACTGGGGTGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVGTHLI*TGVASF
Trigger: GAAGGAGGCCACCCCAGTTCAGATGAGGTGCGTTCC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGGTCCACCTCCTCCTTaGGCGCAGCGTGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTGPPPP*AQRGAP
Trigger: TGGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGGGTCCACCTCCTCCTTaGGCGCAGCGTGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQGPPPP*AQRGAP
Trigger: TGGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACC...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTGGCCCTGGTTCTTTTTaGTGTGCTGCTGGACCGCCT +
Preference number: 4 (lower is better)
Translates to: APEPMPARRPGRAPPGATGPGSF*CAAGPP
Trigger: AGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCC...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTACAGGCGGTCCACCTaGGACTGCCGCCGGCTGATC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNYRRST*DCRRLI
Trigger: GATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCTCACCCAGCTCCTTaGGCGCCACGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNPHPAP*APRTGG
Trigger: ACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRSPGG*AGTAST
Trigger: AGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCCTCAATCTGTCCCTaGAGCTCTCGGGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSSICP*SSRASL
Trigger: CAGTGACGCCCGAGAGCTTCAGGGACAGATTGAGGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCGTCGGCTGTGGAGCTaGCATGCAGGCGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNRRLWS*HAGGHP
Trigger: AGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTCCGCGCGATCAGCTaGCTCCTGGCGCTCCGGTCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLRAIS*LLALRS
Trigger: CGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCAGCCTCCTCGGATTaGTCGACTGACTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVAASSD*STDSCR
Trigger: GCGGCAAGAGTCAGTCGATCAATCCGAGGAGGCTGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGGAAGCTCGCGTGGCTaGGGCAGCGACGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSGSSRG*GSDGPA
Trigger: TGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTGGCCTTGTGCAGGCTaGGCAGCGGTTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRWPCAG*AAVPHR
Trigger: ACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTTAACCGCATGGCTCTaGGGCGGCGGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRLTAWL*GGGVQG
Trigger: CCCCTGCACTCCGCCGCCTCAGAGCCATGCGGTTAA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAAGTGGCAGCCGCTCCTaGACCCATGCCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSGSRS*THASSS
Trigger: CGACGAGCTGGCATGGGTTCAGGAGCGGCTGCCACT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAAGCCCGAGGAGGGATaGGGGGCACCTGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNKPEEG*GAPGLV
Trigger: GACAAGCCCAGGTGCCCCTCATCCCTCCTCGGGCTT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGTGGGCCTGGGCAGCTaGTCCCCAGACAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRVGLGS*SPDSTS
Trigger: GGAAGTGCTGTCTGGGGAGCAGCTGCCCAGGCCCAC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGTGGGCCTGGGCAGCTaGTCCCCAGACAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIVGLGS*SPDSTS
Trigger: GGAAGTGCTGTCTGGGGAGCAGCTGCCCAGGCCCAC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGTGAGTGGATCCGCATaGGGCCGCGCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTVSGSA*GRAWAW
Trigger: CCAGGCCCACGCGCGGCCGCATGCGGATCCACTCAC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCAGCCTCCCGCTCATaGTCAGCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVAASRS*SAFSSS
Trigger: TGAGCTGGAGAAGGCTGAGCATGAGCGGGAGGCTGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGTAGTAGCCTTCGGCTaGCAATGCCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVVVAFG*QCLGQL
Trigger: GAGCTGGCCCAGGCATTGGCAGCCGAAGGCTACTAC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCTGTCACGCTGGGCTaGCACCCGCCGGATATCGTA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRAVTLG*HPPDIV
Trigger: TACGATATCCGGCGGGTGGCAGCCCAGCGTGACAGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGCAGGGCAAGGTTCTaGTCAAGTCGTGTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVCRARF*SSRVRR
Trigger: CCGGCGGACACGACTTGAGCAGAACCTTGCCCTGCA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCTGCCTCCACCAGGTaGTGCCCACACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSASTR*CPHSRD
Trigger: GTCCCGGGAGTGTGGGCAGCACCTGGTGGAGGCAGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCTGCAACAGGTCGTCTaGCTCCACCAGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGALQQVV*LHQVLP
Trigger: GGGCAGCACCTGGTGGAGGCAGACGACCTGTTGCAG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCACACCGCAGGGCCTaGTGCAGCAACGCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVPHRRA*CSNARR
Trigger: GCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTGTGG...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCACGGGCCCGCGATGTaGCTCCACCTCCCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSHGPAM*LHLPGE
Trigger: CTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACACGGGCCCGCGATGTaGCTCCACCTCCCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHGPAM*LHLPGE
Trigger: CTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCACCTCGCCAAACATaGGGTAGACAGCGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVAPRQT*GRQRAR
Trigger: ACGCGCTCGCTGTCTACCGCATGTTTGGCGAGGTGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTCTCGAATCGGTGCTaGACCACCTCGACGTCGTCG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLSNRC*TTSTSS
Trigger: CGACGACGTCGAGGTGGTGCAGCACCGATTCGAGAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGCTGGCCGCCACGATaGGAGCATAGTCTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRWPPR*EHSLPR
Trigger: GCGAGGAAGACTATGCTCGCATCGTGGCGGCCAGCG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCCTGCACGGCCACCTaGATCTTTTGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVACTAT*IFCWLS
Trigger: GCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGGCCCTCTGCAGCCTaGACGGCCACCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRPSAA*TATCIF
Trigger: AAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGAGGCCCTCTGCAGCCTaGACGGCCACCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSRPSAA*TATCIF
Trigger: AAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCT...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCTCCCCGTAGATGTTaGCCTGCCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAPRRC*PASAGP
Trigger: AGGGCCTGCTGAGGCAGGGCAACATCTACGGGGAGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNGCPPA*HPAPSA
Trigger: TGCTGATGGCGCGGGATGGCACGCGGGAGGACAACC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCAGCTCGGCCATGAATaGCTGGTGCCGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVQLGHE*LVPEPS
Trigger: AGATGGCTCCGGCACCAGGCATTCATGGCCGAGCTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAGTTCGGGCTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCTGGCCTCAAAGAGCTaGCGTGCCTTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLASKS*RALAWV
Trigger: CACCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCAGCTGGTCTGCTTTaGTGGCCTCAAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPAGLL*WPQRAA
Trigger: GGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTAGCTCAGCAAAGCTCTaGACCAGCTGGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLASSAKL*TSWSAL
Trigger: CAAAGCAGACCAGCTGGTGCAGAGCTTTGCTGAGCT...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAAGCGGCGGCGCTCCTaGAACGGCTCGAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSKRRRS*NGSSRR
Trigger: GCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCTCGTCGTCCAGTCGTaGGCCACCTGGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGALVVQS*ATWCNS
Trigger: GGAGTTGCACCAGGTGGCGCACGACTGGACGACGAG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRLPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGALPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGCTGCTGGACCGCCTaGAAACCGTTGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVCCWTA*KPLPRS
Trigger: AGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACAGGCGCTCTGCAGCTaGTCCAGGCCCCGGCGCACT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTQALCS*SRPRRT
Trigger: AGTGCGCCGGGGCCTGGAGCAGCTGCAGAGCGCCTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCGTCCAGCACCTGCTaGCGTCGCTCGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTASSTC*RRSAAS
Trigger: GGAGGCTGCCGAGCGACGGCAGCAGGTGCTGGACGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTGCGTCCAGCACCTGCTaGCGTCGCTCGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLASSTC*RRSAAS
Trigger: GGAGGCTGCCGAGCGACGGCAGCAGGTGCTGGACGC...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTATCATGAGCAGCTCCTaGTCGCCCAGCCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAIMSSS*SPSHAS
Trigger: GGAGGCGTGGCTGGGCGAGCAGGAGCTGCTCATGAT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGATCATGAGCAGCTCCTaGTCGCCCAGCCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLIMSSS*SPSHAS
Trigger: GGAGGCGTGGCTGGGCGAGCAGGAGCTGCTCATGAT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCATCATGAGCAGCTCCTaGTCGCCCAGCCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISIMSSS*SPSHAS
Trigger: GGAGGCGTGGCTGGGCGAGCAGGAGCTGCTCATGAT...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATGCCGCCGGCTGATCTaGTCGCTGTCCGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTCRRLI*SLSGCP
Trigger: GGGGCACCCGGACAGCGAGCAGATCAGCCGGCGGCA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGCAGCACCGAGACATaGTCAAAGTCCTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLCSTET*SKSWPS
Trigger: GCTCGGCCAGGACTTTGAGCATGTCTCGGTGCTGCA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCAGCACCGAGACATaGTCAAAGTCCTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCSTET*SKSWPS
Trigger: GCTCGGCCAGGACTTTGAGCATGTCTCGGTGCTGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACAGCCGTTCCCGCCCTaGCATACCTGTCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIQPFPP*HTCLAG
Trigger: GCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACAGCCGTTCCCGCCCTaGCATACCTGTCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQQPFPP*HTCLAG
Trigger: GCCAGCGAGACAGGTATGGCAGGGCGGGAACGGCTG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGCCATGGTGGCCGCTaGTGTATGGCCACACTCGAT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVGHGGR*CMATLD
Trigger: ATCGAGTGTGGCCATACAGCAGCGGCCACCATGGCC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCTCTCAGGGTCCGCTaGATGGAACTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVALRVR*MELALG
Trigger: ACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTTGGGCCGCCCCCTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAGGGGGCGGCCCA...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATGGGCCGCCCCCTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAGGGGGCGGCCCA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCTGGGCTTGTCGGCTaGCCCAATCTGGCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPGLVG*PNLAGD
Trigger: ATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACAGCTTGTCCAGCTGTaGCTGGATCTCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRQLVQL*LDLISH
Trigger: ATGGCTGATGAGATCCAGGCACAGCTGGACAAGCTG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCCTCATCCACGCTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRPHPRC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGTCGCCGGATAAGCTaGTCCACCTCATCCACGCTG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLCRRIS*STSSTL
Trigger: CAGCGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGTCGCCGGATAAGCTaGTCCACCTCATCCACGCTG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCRRIS*STSSTL
Trigger: CAGCGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGGCTGCAGCCGCTTTaGGGAAGGCCTCATGTCGCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRLQPL*GRPHVA
Trigger: GGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCTCTCTTCCCAGGCTaGAGCCGCTTTGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPLFPG*SRFAEG
Trigger: GCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGGTAGGCGGCTaGTTGCTCTGTTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSGVGG*LLCSAL
Trigger: CAAAGCGGAACAGAGCAAGCAGCCGCCTACCCCACT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGTTCGCTGGACTCCTaGCGCTCCAAGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLCSLDS*RSKRRS
Trigger: TGAGCGGCGCTTGGAGCGGCAGGAGTCCAGCGAACA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGTTCGCTGGACTCCTaGCGCTCCAAGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRCSLDS*RSKRRS
Trigger: TGAGCGGCGCTTGGAGCGGCAGGAGTCCAGCGAACA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCGTGTGTGCTCCCGGATaGCGGGCCCTTGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISVCAPG*RALGVL
Trigger: AAGGACTCCAAGGGCCCGGCATCCGGGAGCACACAC...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCGCTGGTGGCCTTGTaGAGGCTGAGCAGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSLVAL*RLSSGS
Trigger: GGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCGCTGGTGGCCTTGTaGAGGCTGAGCAGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSLVAL*RLSSGS
Trigger: GGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGGGAAGTCACTTCCTaGGCCCGCTGGCCCTGCGAT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLWEVTS*ARWPCD
Trigger: ATCGCAGGGCCAGCGGGCGCAGGAAGTGACTTCCCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGGGAAGTCACTTCCTaGGCCCGCTGGCCCTGCGAT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAWEVTS*ARWPCD
Trigger: ATCGCAGGGCCAGCGGGCGCAGGAAGTGACTTCCCA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCCCTCCTTTCCGGTaGCCACCATGTCACGCGTCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSPPFR*PPCHAS
Trigger: GGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCTCAACTGGCCCCCTaGCCACCCCCATCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAQLAP*PPPSSS
Trigger: TGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCACCAGCGCCCCCGTaGCCATCCCTAGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSPAPP*PSLGQR
Trigger: TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCGTCGTCCAGGTCGTaGGCCACCTGGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSSSRS*ATWCNS
Trigger: GGAGTTGCACCAGGTGGCGCACGACCTGGACGACGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGAGGACGCTGTCACGCTaGGCTGCCACCCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRRTLSR*AATRRI
Trigger: TATCCGGCGGGTGGCAGCCCAGCGTGACAGCGTCCT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGTTAGCAGGGCCCACTaGCGCAGGACGCTGTCACGC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRVSRAH*RRTLSR
Trigger: GCGTGACAGCGTCCTGCGCCAGTGGGCCCTGCTAAC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGGGAGGCGCGCTGTGCTaGACAGGTCATGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQGGALC*TGHARR
Trigger: GCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCC...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGCAGGATCTTGTGCTaGGCCAGGAGGCGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLCRILC*ARRRAV
Trigger: CACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGCAGGATCTTGTGCTaGGCCAGGAGGCGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRCRILC*ARRRAV
Trigger: CACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCGCCAGGCGGCGGCTaGAAGCTTCGTCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTAPGGG*KLRRGR
Trigger: TCGGCCACGACGAAGCTTCCAGCCGCCGCCTGGCGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCAGCGCCACCACCAGTaGCCCTGCGCCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSQRHHQ*PCATGT
Trigger: GGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTAGCTCCTGGACTGTGTaGTTCACGTCCAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPSSWTV*FTSRTR
Trigger: CCGCGTTCTGGACGTGAACCACACAGTCCAGGAGCT...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCTTCCACCAGCTCCTaGACTGTGTGGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPSTSS*TVWFTS
Trigger: GGACGTGAACCACACAGTCCAGGAGCTGGTGGAAGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCTTCCACCAGCTCCTaGACTGTGTGGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPSTSS*TVWFTS
Trigger: GGACGTGAACCACACAGTCCAGGAGCTGGTGGAAGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCACCTCATCTGAACTaGGGTGGCCTCCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLAPHLN*GGLLPP
Trigger: TGGTGGAAGGAGGCCACCCCAGTTCAGATGAGGTGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCCTCTTCTAGGCTGTTaGGCAGGGGCCCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRPLLGC*AGAPRC
Trigger: GCAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCACCACGAGCGCCTaGCGTAGATCCCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSTTSA*RRSRRK
Trigger: CTTCCTGCGGGATCTACGCCAGGCGCTCGTGGTGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGACAGCGCCATCTCCTaGTTACGCAGCACCACGAGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVDSAIS*LRSTTS
Trigger: GCTCGTGGTGCTGCGTAACCAGGAGATGGCGCTGTC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCCTGCATCAGTTGCTaGCCCTCCCGCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSCISC*PSRSIF
Trigger: GAAGATCGAGCGGGAGGGCCAGCAACTGATGCAGGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAAGCTCCGCCCAGCACTaGCGGATCTCGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSSAQH*RISPSF
Trigger: GAAGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTGCCGTGCCTTGGCCTaGGTGGTGCTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNCRALA*VVLSSS
Trigger: GGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGAGCTGCCGTGCCTTaGCCTGGGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGARAAVP*PGWCSP
Trigger: TGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCTGGTCTGCTTTGCTaGCCTCAAAGAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSAGLLC*PQRAAV
Trigger: CACGGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPGATP*KPAASG
Trigger: GCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCAGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVQSCAT*CNSLEA
Trigger: GGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGTCTGCATGGCCAGTaGCAGCCGCTCCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVCLHGQ*QPLLNP
Trigger: TGGGTTCAGGAGCGGCTGCCACTGGCCATGCAGACA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLTWRLS*YSQYCC
Trigger: ACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAACATGCTCAAAGTCCTaGCCGAGCTCGGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSTCSKS*PSSGEP
Trigger: TGGCTCACCCGAGCTCGGCCAGGACTTTGAGCATGT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCATGGAACTGGCACTaGGTCTCGGCTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAWNWH*VSAQAG
Trigger: CCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCATGGAACTGGCACTaGGTCTCGGCTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNAWNWH*VSAQAG
Trigger: CCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCAGGGTCCGCTGCATaGAACTGGCACTGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSGSAA*NWHWVS
Trigger: CGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCGCGGACTTGGCTGTaGAAGCGCAGGGCGTCGGCT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSRTWL*KRRASA
Trigger: AGCCGACGCCCTGCGCTTCCACAGCCAAGTCCGCGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGCAGGTCGCGGACTTaGCTGTGGAAGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISRSRT*LWKRRA
Trigger: CGCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAGCAGGTCGCGGACTTaGCTGTGGAAGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSRSRT*LWKRRA
Trigger: CGCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGTCGGCTGCCCCAATCTaGCTGGCGATGCCATCCATC +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLSAAPI*LAMPSI
Trigger: GATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGA...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCGGCTGCCCCAATCTaGCTGGCGATGCCATCCATC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSAAPI*LAMPSI
Trigger: GATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTGATGACACGTCCCTaGGCTTGTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLMTRP*ACRLPQ
Trigger: TTGGGGCAGCCGACAAGCCCAGGGACGTGTCATCAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCAGCCACTCCCAATaGCGGTCCCACTTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCSHSQ*RSHFSD
Trigger: GTCGGAAAAGTGGGACCGCCATTGGGAGTGGCTGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGCAGGAGCGGCTCCTaGGCTGTCAGCCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLCRSGS*AVSQAS
Trigger: TGATGCCTGGCTGACAGCCCAGGAGCCGCTCCTGCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCTTGCGCCCCAGCAGTaGGGTAGGCGGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRLAPQQ*GRRLLA
Trigger: AGCAAGCAGCCGCCTACCCCACTGCTGGGGCGCAAG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCTTTCATAGCCCCCTaGCCGCAGCAGGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPFIAP*PQQGRR
Trigger: GCGGCGCCCCTGCTGCGGCCAGGGGGCTATGAAAGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGCCTTTCATAGCCCCCTaGCCGCAGCAGGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMPFIAP*PQQGRR
Trigger: GCGGCGCCCCTGCTGCGGCCAGGGGGCTATGAAAGG...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCATCTCCTGTTCGCTaGACTCCTGCCGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVASPVR*TPAAPS
Trigger: GCTTGGAGCGGCAGGAGTCCAGCGAACAGGAGATGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACCCAGCAGGCAGCCCTaGGCCTGCCTCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIPSRQP*ACLFLL
Trigger: CAGGAGAAAGAGGCAGGCCCAGGGCTGCCTGCTGGG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCTGCACTGTGTGAGTaGGCGGTGGCGGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTAALCE*AVAEAR
Trigger: CCGCGCCTCCGCCACCGCCCACTCACACAGTGCAGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGGGATGAGGGGCACCTaGGCTTGTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNGMRGT*ACRLPQ
Trigger: TTGGGGCAGCCGACAAGCCCAGGTGCCCCTCATCCC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GAGGCCGCCAGTTCGGGCTTCTCCTGCATCAGTTGCTGGCCCTCCCGCTCGATCCTTGGTTCCTGTGCCTaGCCTCTAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: EAASSGFSCISCWPSRSILGSCA*PLAAGS
Trigger: AGATCCAGCAGCTAGAGGCCAGGCACAGGAACCAAG...GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCAGAGCATCCTTGGCTaGGCGTGTCTCTCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLQSILG*ACLSVV
Trigger: GACAACAGAGAGACACGCTCAGCCAAGGATGCTCTG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCGTGCAATAGGCCGTaGAAGCCTGGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVACNRP*KPGVAA
Trigger: AGCAGCAACTCCAGGCTTTCACGGCCTATTGCACGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCTTCTCCTGGAACTTaGCAGGCTTCTCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPSPGT*QASPAC
Trigger: GCACGCTGGAGAAGCCTGTCAAGTTCCAGGAGAAGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCCCGGGACAGCAGCTaGGCCTGCATCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISRDSS*ACISSI
Trigger: GATGGAGGAGATGCAGGCTCAGCTGCTGTCCCGGGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGGAACGCACCTCATCTaGACTGGGGTGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLGTHLI*TGVASF
Trigger: GAAGGAGGCCACCCCAGTTCAGATGAGGTGCGTTCC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGGAACGCACCTCATCTaGACTGGGGTGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAGTHLI*TGVASF
Trigger: GAAGGAGGCCACCCCAGTTCAGATGAGGTGCGTTCC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGAGACTGCCGCCGGCTaGTCTGCTCGCTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSETAAG*SARCPG
Trigger: ACCCGGACAGCGAGCAGATCAGCCGGCGGCAGTCTC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQRSPGG*AGTAST
Trigger: AGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRRSPGG*AGTAST
Trigger: AGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCTCTCGGGCGTCACTaGAGAACTTATGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSALGRH*RTYEAP
Trigger: GGGAGCTTCATAAGTTCTTCAGTGACGCCCGAGAGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCTGCTCTGTTCCGCTTTaGTTTTCTCGATCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTCSVPL*FSRSWS
Trigger: TGACCACGATCGAGAAAATCAAAGCGGAACAGAGCA...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGGAGGCGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTGGARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCTCGGATTGATCGACTaGCTCTTGCCGCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLGLID*LLPLRP
Trigger: CGGCCTGAGCGGCAAGAGTCAGTCGATCAATCCGAG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTTCGTGCTGCACTGTGTaGGTGGGCGGTGGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGSCCTV*VGGGGG
Trigger: GCCTCCGCCACCGCCCACTCACACAGTGCAGCACGA...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGGCAGCATTGGAAGTaGGGTAAAGGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRQHWK*GKGGEG
Trigger: CCCCTCCCCGCCTTTACCTCACTTCCAATGCTGCCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCGCCCCTCCCCTCATaGAGTGGCATTTACAACTGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSPLPS*SGIYNW
Trigger: CCAGTTGTAAATGCCACTTCATGAGGGGAGGGGCGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCGCCCCTCCCCTCATaGAGTGGCATTTACAACTGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSPLPS*SGIYNW
Trigger: CCAGTTGTAAATGCCACTTCATGAGGGGAGGGGCGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTAGTGGCAGCCGCTCCTaGACCCATGCCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: IFSIVVRRRRELNLSSQASGSRS*THASSS
Trigger: CGACGAGCTGGCATGGGTTCAGGAGCGGCTGCCACT...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAAAGAGCGAGGCCGCTaGGGTGGACGCAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSKERGR*GGRSRL
Trigger: CAGCCGGCTGCGTCCACCGCAGCGGCCTCGCTCTTT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCCAGGTGCACGCGCTaGTCCTTCAGAAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSRCTR*SFRNCS
Trigger: GCTGCAGTTTCTGAAGGAGCAGCGCGTGCACCTGGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGTGCTGCTCAGCTGTaGGGAAGGCTCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRGAAQL*GRLSAG
Trigger: ACCTGCAGAGAGCCTTCCGCACAGCTGAGCAGCACC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCAAAGAGGCGACGGTTaGAGGCACGCAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLQRGDG*RHAVCS
Trigger: AGAGCAAACTGCGTGCCTGCAACCGTCGCCTCTTTG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCAGCCTCCCGCTCATaGTCAGCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLAASRS*SAFSSS
Trigger: TGAGCTGGAGAAGGCTGAGCATGAGCGGGAGGCTGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCCTTCGGCTGCCAATaGCTGGGCCAGCTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSAFGCQ*LGQLRH
Trigger: GTGGCGGAGCTGGCCCAGGCATTGGCAGCCGAAGGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGCAGGGCAAGGTTCTaGTCAAGTCGTGTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRCRARF*SSRVRR
Trigger: CCGGCGGACACGACTTGAGCAGAACCTTGCCCTGCA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCGCCCAGCTCGCCCTaGAGGATCTTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPPSSP*RILCWA
Trigger: GGCCCAGCACAAGATCCTGCAGGGCGAGCTGGGCGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGTTCTTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCCCGCCCAGCTCGCCCTaGAGGATCTTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WFFLMCCWTACKPLPRSVPPSSP*RILCWA
Trigger: GGCCCAGCACAAGATCCTGCAGGGCGAGCTGGGCGG...GACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGAAGTCACCGGCGGCTaGCAGGCGGTAAGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSEVTGG*QAVSVA
Trigger: CGCGACGCTTACCGCCTGGCAGCCGCCGGTGACTTC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCCACCACGCGCACCTaGAGCGCCACCACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSTTRT*SATTSG
Trigger: GCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCACAGCTCACACGCGTaGACCTCGCCAAACATGCGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAHSSHA*TSPNMR
Trigger: CCGCATGTTTGGCGAGGTGCACGCGTGTGAGCTGTG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCACAGCTCACACGCGTaGACCTCGCCAAACATGCGG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRHSSHA*TSPNMR
Trigger: CCGCATGTTTGGCGAGGTGCACGCGTGTGAGCTGTG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGGCTCTCGAATCGGTaGTGCACCACCTCGACGTCG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRLSNR*CTTSTS
Trigger: CGACGTCGAGGTGGTGCAGCACCGATTCGAGAGCCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACGCTCATTTCCTCTTTaGGCTGTTCCACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRSFPL*AVPLAP
Trigger: TGGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCCACCTGCATCTTTTaGTGGCTCAGCTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSATCIF*WLSSMV
Trigger: CACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCCACCTGCATCTTTTaGTGGCTCAGCTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLATCIF*WLSSMV
Trigger: CACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCGCCTGCACGGCCACCTaGATCTTTTGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISACTAT*IFCWLS
Trigger: GCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGC...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGGCCCTCTGCAGCCTaGACGGCCACCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRPSAA*TATCIF
Trigger: AAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGGCCCTCTGCAGCCTaGACGGCCACCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRPSAA*TATCIF
Trigger: AAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCTCAGCAGGCCCTCTaGAGCCTGCACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPQQAL*SLHGHL
Trigger: CAGGTGGCCGTGCAGGCTGCAGAGGGCCTGCTGAGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCTCAGCAGGCCCTCTaGAGCCTGCACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPQQAL*SLHGHL
Trigger: CAGGTGGCCGTGCAGGCTGCAGAGGGCCTGCTGAGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCTCCCCGTAGATGTTaGCCTGCCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAPRRC*PASAGP
Trigger: AGGGCCTGCTGAGGCAGGGCAACATCTACGGGGAGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGTTCGGGCTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACTGGCCTCAAAGAGCTaGCGTGCCTTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQLASKS*RALAWV
Trigger: CACCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCACCCACCAGCTCCTTaGTCGCCGGCTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVHPPAP*SPAPAA
Trigger: TGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTG...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCGTGCGCCACCTGGTaGAACTCCTTGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSCATW*NSLEAS
Trigger: GCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQLPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCGCCTGCAAACCGTTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPPANR*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCGCCTGCAAACCGTTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPPANR*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGCTGCTGGACCGCCTaGAAACCGTTGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGACCWTA*KPLPRS
Trigger: AGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAATCATGAGCAGCTCCTaGTCGCCCAGCCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQIMSSS*SPSHAS
Trigger: GGAGGCGTGGCTGGGCGAGCAGGAGCTGCTCATGAT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAATCATGAGCAGCTCCTaGTCGCCCAGCCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIIMSSS*SPSHAS
Trigger: GGAGGCGTGGCTGGGCGAGCAGGAGCTGCTCATGAT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTTGCTCTGTTCGTCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: ERHVQAVHLRLPPADLLACSVRP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGACGAACAGAGCA...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATGCTCTGTTCGTCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRCSVRP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGACGAACAGAGCA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCGACAGCTGCGCGATaGTTTCCTCGTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLATAAR*FPRSSP
Trigger: TGGAGAACTACGAGGAAAGCATCGCGCAGCTGTCGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCGACAGCTGCGCGATaGTTTCCTCGTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSATAAR*FPRSSP
Trigger: TGGAGAACTACGAGGAAAGCATCGCGCAGCTGTCGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATTCTCGGCAATCCAGTaGTCAAGCTCGCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSFSAIQ*SSSLTW
Trigger: CCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTTCTCGGCAATCCAGTaGTCAAGCTCGCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLFSAIQ*SSSLTW
Trigger: CCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCATCTGGTTCACAGCTaGCAGCCGTTCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRHLVHS*QPFPPC
Trigger: GCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCATCTGGTTCACAGCTaGCAGCCGTTCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNHLVHS*QPFPPC
Trigger: GCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACATCTGGTTCACAGCTaGCAGCCGTTCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIHLVHS*QPFPPC
Trigger: GCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGGCCATGGTGGCCGCTaGTGTATGGCCACACTCGAT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLGHGGR*CMATLD
Trigger: ATCGAGTGTGGCCATACAGCAGCGGCCACCATGGCC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGGGACACGAGGAGCTaGAGGTCATGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSWDTRS*RSCSKA
Trigger: AGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCCCCCTCCTGCAGCTaGCGTACCTGGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTAPSCS*RTWDTR
Trigger: CCTCGTGTCCCAGGTACGGCAGCTGCAGGAGGGGGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCTGTGGAGCTGACATaGAGGCGGGCATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLAVELT*RRASSQ
Trigger: CTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCCTGGGCTTGTCGGCTaGCCCAATCTGGCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRPGLVG*PNLAGD
Trigger: ATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCTGGGCTTGTCGGCTaGCCCAATCTGGCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNPGLVG*PNLAGD
Trigger: ATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGACCTCCAGCATCTGCTaGAGCCACTCCCAATGGCGG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRTSSIC*SHSQWR
Trigger: CCGCCATTGGGAGTGGCTGCAGCAGATGCTGGAGGT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGCACCTCCAGCATCTaGTGCAGCCACTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVCTSSI*CSHSQW
Trigger: CCATTGGGAGTGGCTGCAGCAGATGCTGGAGGTGCA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTCCACCTCATCCACGCTaGTGCCCAGCTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: IFSIVVRRRRELNLSSQAPPHPR*CPAPGS
Trigger: AGAGCCGGGAGCTGGGCAGCAGCGTGGATGAGGTGG...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCCTCTCTTCCCAGGCTaGAGCCGCTTTGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRPLFPG*SRFAEG
Trigger: GCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTGTGTGCCGCCTCGTaGTCCGCTGACTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLCAAS*SADSCR
Trigger: GCGGCAGGAGTCAGCGGAGCACGAGGCGGCACACAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACGTCGAGCTCGCGCTTaGGCAGTAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRRARA*AVGSPR
Trigger: ACGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGTTCCCCACCGTGTGTaGTCCCGGATGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSVPHRV*SRMPGP
Trigger: AGGGCCCGGCATCCGGGAGCACACACGGTGGGGAAC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGCTCCTCCTCATCTTTTaGCTGGAGCAAAAACTCACT +
Preference number: 4 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSLLLIF*LEQKLT
Trigger: AGTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAG...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATGGGAAGTCACTTCCTaGGCCCGCTGGCCCTGCGAT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIWEVTS*ARWPCD
Trigger: ATCGCAGGGCCAGCGGGCGCAGGAAGTGACTTCCCA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCCCCTCCTTTCCGGTaGCCACCATGTCACGCGTCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISPPFR*PPCHAS
Trigger: GGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACTCCAGCCAGAAGCATaGAGGGGTGGGCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCILQPEA*RGGLPL
Trigger: GAGGGGAAGCCCACCCCTGCATGCTTCTGGCTGGAG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGACTCCCCAGGGAGGTaGTCCAGCCAGAAGCATGCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLDSPGR*SSQKHA
Trigger: TGCATGCTTCTGGCTGGAGCACCTCCCTGGGGAGTC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGGCGGCCATGGGGACTaGCCACAACCCAATCCCCCG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTGGHGD*PQPNPP
Trigger: CGGGGGATTGGGTTGTGGGCAGTCCCCATGGCCGCC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGTCACCCACAGTCCTaGTTGCCCTCCGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGACHPQS*LPSGSL
Trigger: CAGTGACCCGGAGGGCAAGCAGGACTGTGGGTGACA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000392025.5
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCGTCGTCCAGGTCGTaGGCCACCTGGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSSSRS*ATWCNS
Trigger: GGAGTTGCACCAGGTGGCGCACGACCTGGACGACGA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCGTCGTCCAGGTCGTaGGCCACCTGGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISSSRS*ATWCNS
Trigger: GGAGTTGCACCAGGTGGCGCACGACCTGGACGACGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCAGCCAGATCCGCATaGGCCGCCGCGCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSARSA*AAAPPS
Trigger: AGAGGGAGGCGCGGCGGCGCATGCGGATCTGGCTGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGTTGTCCACTTCCCCTaGTACCTGCGCCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRVVHFP*YLRHRG
Trigger: TCCCCGATGGCGCAGGTACCAGGGGAAGTGGACAAC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGTTGTCCACTTCCCCTaGTACCTGCGCCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAVVHFP*YLRHRG
Trigger: TCCCCGATGGCGCAGGTACCAGGGGAAGTGGACAAC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGGGAGACCAGACGCTaGTTCTCATTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLWETRR*FSFSQL
Trigger: GAGCTGGCTGAATGAGAACCAGCGTCTGGTCTCCCA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTTCGTGTTTCTTCATaGCTGCCTCCACTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLRVSS*LPPLRA
Trigger: TGCCCGCAGTGGAGGCAGCCATGAAGAAACACGAAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAATGTACACCATCTCCTaGAAGACCTTCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRMYTIS*KTFCRA
Trigger: TGCCCTGCAGAAGGTCTTCCAGGAGATGGTGTACAT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTGCAGGATCTTGTGCTaGGCCAGGAGGCGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRCRILC*ARRRAV
Trigger: CACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACTGGAAGCTTCGTCGTaGCCGAAGTCACCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCILEASS*PKSPAA
Trigger: AGCCGCCGGTGACTTCGGCCACGACGAAGCTTCCAG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAATCCGGCACACGCATaGAGAGCAGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLNPAHA*RAAIAP
Trigger: AGGAGCAATGGCTGCTCTCCATGCGTGTGCCGGATT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCTTCCACCAGCTCCTaGACTGTGTGGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPSTSS*TVWFTS
Trigger: GGACGTGAACCACACAGTCCAGGAGCTGGTGGAAGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTGTTGAGGTGGTCCTaGCAGGAACGCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLLRWS*QERTSS
Trigger: AGATGAGGTGCGTTCCTGCCAGGACCACCTCAACAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCACCTGCTGTTGAGGTaGTCCTGGCAGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRHLLLR*SWQERT
Trigger: GGTGCGTTCCTGCCAGGACCACCTCAACAGCAGGTG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGCACCACGAGCGCCTaGCGTAGATCCCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISTTSA*RRSRRK
Trigger: CTTCCTGCGGGATCTACGCCAGGCGCTCGTGGTGCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGACAGCGCCATCTCCTaGTTACGCAGCACCACGAGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLDSAIS*LRSTTS
Trigger: GCTCGTGGTGCTGCGTAACCAGGAGATGGCGCTGTC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCGGCCATGAATGCCTaGTGCCGGAGCCATCTCTTA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSAMNA*CRSHLL
Trigger: TAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTAGCTCCGCCCAGCACTaGCGGATCTCGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IFSIVVRRRRELNLSSQASSAQH*RISPSF
Trigger: GAAGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCT...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAGAGCTGCCGTGCCTTaGCCTGGGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNRAAVP*PGWCSP
Trigger: TGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGAGAGCTGCCGTGCCTTaGCCTGGGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRRAAVP*PGWCSP
Trigger: TGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGTCTGCATGGCCAGTaGCAGCCGCTCCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRCLHGQ*QPLLNP
Trigger: TGGGTTCAGGAGCGGCTGCCACTGGCCATGCAGACA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCAAGCTCGCTCACCTaGCGGCTGAGCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASSSLT*RLSWYS
Trigger: GCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCGCTGCATGGAACTaGCACTGGGTCTCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSAAWN*HWVSAQ
Trigger: CTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCAGGGTCCGCTGCATaGAACTGGCACTGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSGSAA*NWHWVS
Trigger: CGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCAGCTCCTGGCAGGTaGTCAGCTCAGGCACCCGCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPAPGR*SAQAPA
Trigger: CGCGGGTGCCTGAGCTGACCACCTGCCAGGAGCTGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCAGCTCCTGGCAGGTaGTCAGCTCAGGCACCCGCG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPAPGR*SAQAPA
Trigger: CGCGGGTGCCTGAGCTGACCACCTGCCAGGAGCTGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCCTCCTGGGCAAACTaGTGCACCTCCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAASWAN*CTSSIC
Trigger: GCAGATGCTGGAGGTGCACCAGTTTGCCCAGGAGGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCGGGCTTGAGCTCCTaGCGCACATACCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSGLSS*RTYPTR
Trigger: TCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCATCTCCTGTTCGCTaGACTCCTGCCGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRASPVR*TPAAPS
Trigger: GCTTGGAGCGGCAGGAGTCCAGCGAACAGGAGATGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGTTGGGCAGGCGACCTaGGGGAAGCTCGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSVGQAT*GKLAWL
Trigger: CAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAAC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGGATGCCGGGCCCTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRMPGP*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCGGATGCCGGGCCCTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRMPGP*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGTAGTGGGTAGTGTCTaGCCCCAGCGGGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAVVGSV*PQRAIS
Trigger: AGAGATCGCCCGCTGGGGCCAGACACTACCCACTAC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGACCACCCCAGCTTCTTaGGGCAGGATCTGCAGATCG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVTTPAS*GRICRS
Trigger: CGATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR CAA 72 bp CCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTaGGAACTAGGGGCTCCCGCCCCTGCGGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: PFRCPPCHASSV*ELGAPAPAEEK
Trigger: TTTTTCTTCCGCAGGGGCGGGAGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR CAA 72 bp ATGAATGCCTGGTGCCGGAGCCATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATC +
Preference number: 4 (lower is better)
Translates to: MNAWCRSHLLCS*WLSSRVPSRAI
Trigger: GATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATGGCTCCGGCACCAGGCATTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 72 bp AGAGAGCTGAACCTCTCTTCCCAGGCTGCAGCCGCTTaGCGGAAGGCCTCATGTCGCCGGATAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RELNLSSQAAAA*RKASCRRISCS
Trigger: GGAGCAGCTTATCCGGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGGTTCAGCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCAGAGCATCCTTGGCTaGGCGTGTCTCTCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVQSILG*ACLSVV
Trigger: GACAACAGAGAGACACGCTCAGCCAAGGATGCTCTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCCGCCAGCTGGTGGTaGAATTCTGGATGTTTACCT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPASWW*NSGCLP
Trigger: AGGTAAACATCCAGAATTTCACCACCAGCTGGCGGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCGTGCAATAGGCCGTaGAAGCCTGGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAACNRP*KPGVAA
Trigger: AGCAGCAACTCCAGGCTTTCACGGCCTATTGCACGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCTTCTCCTGGAACTTaGCAGGCTTCTCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPSPGT*QASPAC
Trigger: GCACGCTGGAGAAGCCTGTCAAGTTCCAGGAGAAGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCTTCTCCTGGAACTTaGCAGGCTTCTCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPSPGT*QASPAC
Trigger: GCACGCTGGAGAAGCCTGTCAAGTTCCAGGAGAAGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGGTTCCACCTGCTGTTaGGGTGGTCCTGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIGSTCC*GGPGRN
Trigger: GTTCCTGCCAGGACCACCTCAACAGCAGGTGGAACC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGGTTCCACCTGCTGTTaGGGTGGTCCTGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRGSTCC*GGPGRN
Trigger: GTTCCTGCCAGGACCACCTCAACAGCAGGTGGAACC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCAGCTCCATGGTGGTaGGAAAGTCACGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSAPWW*ESHGAV
Trigger: AACAGCACCGTGACTTTCTCACCACCATGGAGCTGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGGCCCTGGTTCTTTTTaGTGTGCTGCTGGACCGCCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAGPGSF*CAAGPP
Trigger: AGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTACAGGCGGTCCACCTaGGACTGCCGCCGGCTGATC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSYRRST*DCRRLI
Trigger: GATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCTCACCCAGCTCCTTaGGCGCCACGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPHPAP*APRTGG
Trigger: ACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTCGCTGGCAAACTCTaGGAATTTCTCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLAGKL*EFLLQH
Trigger: GTGCTGCAGGAGAAATTCTCAGAGTTTGCCAGCGAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCTCTCGGGCGTCACTaGAGAACTTATGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVALGRH*RTYEAP
Trigger: GGGAGCTTCATAAGTTCTTCAGTGACGCCCGAGAGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCTCAATCTGTCCCTaGAGCTCTCGGGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSSICP*SSRASL
Trigger: CAGTGACGCCCGAGAGCTTCAGGGACAGATTGAGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCGTCGGCTGTGGAGCTaGCATGCAGGCGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRRLWS*HAGGHP
Trigger: AGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGCCATGGCACTTTTGTTaGGCAGCAGAGATCGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSPWHFC*AAEIAP
Trigger: TGGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGG...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGGCGCCGCAGAGAGCTaGACCTCTCTTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSGAAES*TSLPRL
Trigger: CAGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCTCGGATTGATCGACTaGCTCTTGCCGCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRLGLID*LLPLRP
Trigger: CGGCCTGAGCGGCAAGAGTCAGTCGATCAATCCGAG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCAGCCTCCTCGGATTaGTCGACTGACTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAASSD*STDSCR
Trigger: GCGGCAAGAGTCAGTCGATCAATCCGAGGAGGCTGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTTGGCCTTGTGCAGGCTaGGCAGCGGTTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGWPCAG*AAVPHR
Trigger: ACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCA...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGGCAGCATTGGAAGTaGGGTAAAGGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRQHWK*GKGGEG
Trigger: CCCCTCCCCGCCTTTACCTCACTTCCAATGCTGCCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGTGGCAGCCGCTCCTaGACCCATGCCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSGSRS*THASSS
Trigger: CGACGAGCTGGCATGGGTTCAGGAGCGGCTGCCACT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCAGGTGCACGCGCTaGTCCTTCAGAAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSRCTR*SFRNCS
Trigger: GCTGCAGTTTCTGAAGGAGCAGCGCGTGCACCTGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGGTGCTGCTCAGCTGTaGGGAAGGCTCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRGAAQL*GRLSAG
Trigger: ACCTGCAGAGAGCCTTCCGCACAGCTGAGCAGCACC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAAAGCCTGGAGTTGCTaGTGCACCCCACTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSKAWSC*CTPLKE
Trigger: CTCCTTAAGTGGGGTGCAGCAGCAACTCCAGGCTTT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAAGCCTGGAGTTGCTaGTGCACCCCACTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLKAWSC*CTPLKE
Trigger: CTCCTTAAGTGGGGTGCAGCAGCAACTCCAGGCTTT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGTGAAAGCCTGGAGTTaGTGCTGCACCCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLVKAWS*CCTPLK
Trigger: CTTAAGTGGGGTGCAGCAGCAACTCCAGGCTTTCAC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCAGCCTCCCGCTCATaGTCAGCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAASRS*SAFSSS
Trigger: TGAGCTGGAGAAGGCTGAGCATGAGCGGGAGGCTGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCATGGCTGCCTCCACTaGGGGCAGCTCATACCCAAA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAHGCLH*GQLIPK
Trigger: TTTGGGTATGAGCTGCCCGCAGTGGAGGCAGCCATG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCATGGCTGCCTCCACTaGGGGCAGCTCATACCCAAA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRHGCLH*GQLIPK
Trigger: TTTGGGTATGAGCTGCCCGCAGTGGAGGCAGCCATG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGTGTTTCTTCATGGCTaGCTCCACTGCGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLVFLHG*LHCGQL
Trigger: GAGCTGCCCGCAGTGGAGGCAGCCATGAAGAAACAC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGTAGGCCGCAATGTCTaGCTCGATCGCTTCGTGTTT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLVGRNV*LDRFVF
Trigger: AAACACGAAGCGATCGAGGCAGACATTGCGGCCTAC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTAGGCCGCAATGTCTaGCTCGATCGCTTCGTGTTT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSVGRNV*LDRFVF
Trigger: AAACACGAAGCGATCGAGGCAGACATTGCGGCCTAC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGTAGTAGCCTTCGGCTaGCAATGCCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRVVAFG*QCLGQL
Trigger: GAGCTGGCCCAGGCATTGGCAGCCGAAGGCTACTAC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATGCAGGGCAAGGTTCTaGTCAAGTCGTGTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCICRARF*SSRVRR
Trigger: CCGGCGGACACGACTTGAGCAGAACCTTGCCCTGCA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCCTGGAAGACCTTCTaGAGGGCAAGGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSWKTF*RARFCS
Trigger: TGAGCAGAACCTTGCCCTGCAGAAGGTCTTCCAGGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCTGCCTCCACCAGGTaGTGCCCACACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSASTR*CPHSRD
Trigger: GTCCCGGGAGTGTGGGCAGCACCTGGTGGAGGCAGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGCAGTCCATGCTTCTaGAACAGGTCGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSSPCF*NRSSAS
Trigger: GGAGGCAGACGACCTGTTGCAGAAGCATGGACTGCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCCTCCAGCAGTCCATaGTTCTGCAACAGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPSSSP*FCNRSS
Trigger: AGACGACCTGTTGCAGAAGCATGGACTGCTGGAGGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCCGCCAGGCAGCCGTaGACGTGGTTCACGCGGTTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSARQP*TWFTRL
Trigger: CAACCGCGTGAACCACGTGCACGGCTGCCTGGCGGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCGAACAACTGCTCTaGTTCCACCACGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSEQLL*FHHAHL
Trigger: CAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGACCTCAGCGAACAACTaGTCTGCTTCCACCACGCGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRTSANN*SASTTR
Trigger: GCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGACCTCAGCGAACAACTaGTCTGCTTCCACCACGCGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLTSANN*SASTTR
Trigger: GCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCATGTAGGAAGCGCTaGAGGCGCCCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSCRKR*RRPAAA
Trigger: GGCGGCAGCAGGGCGCCTGCAGCGCTTCCTACATGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTCCACCGATTCCACTGTaGCCGGGAGCTCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGPPIPL*PGAPHQ
Trigger: CTGGTGCGGAGCTCCCGGGCACAGTGGAATCGGTGG...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCACCGATTCCACTGTaGCCGGGAGCTCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPPIPL*PGAPHQ
Trigger: CTGGTGCGGAGCTCCCGGGCACAGTGGAATCGGTGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGCCTGCACGGCCACCTaGATCTTTTGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIACTAT*IFCWLS
Trigger: GCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACAGTCTCGGAGGAAGTaGTGCAGCTCAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSQSRRK*CSSSWS
Trigger: TGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTGGTTGTCCTCCCGCGTaGCATCCCGCGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVGCPPA*HPAPSA
Trigger: TGCTGATGGCGCGGGATGGCACGCGGGAGGACAACC...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACAGCTCGGCCATGAATaGCTGGTGCCGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQQLGHE*LVPEPS
Trigger: AGATGGCTCCGGCACCAGGCATTCATGGCCGAGCTG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTTCTCCTGCATCAGTTaGTGGCCCTCCCGCTCGATC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRFSCIS*WPSRSI
Trigger: GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTTCTCCTGCATCAGTTaGTGGCCCTCCCGCTCGATC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAFSCIS*WPSRSI
Trigger: GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCAGCTGGTCTGCTTTaGTGGCCTCAAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPAGLL*WPQRAA
Trigger: GGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCGTGCGCCACCTGGTaGAACTCCTTGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSCATW*NSLEAS
Trigger: GCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCGTGCGCCACCTGGTaGAACTCCTTGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISCATW*NSLEAS
Trigger: GCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACCGCCTGCAAACCGTTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQPPANR*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCTGCTGGACCGCCTaGAAACCGTTGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQCCWTA*KPLPRS
Trigger: AGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGGTACAGCCAGTACTaGTGTTCCAGAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAWYSQY*CSRATR
Trigger: CCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCTGAGAATTTCTCCTaGAGCACCGAGACATGCTCA +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSENFS*STETCS
Trigger: TGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGGCCATGGTGGCCGCTaGTGTATGGCCACACTCGAT +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNGHGGR*CMATLD
Trigger: ATCGAGTGTGGCCATACAGCAGCGGCCACCATGGCC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGCTCTCAGGGTCCGCTaGATGGAACTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQALRVR*MELALG
Trigger: ACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGGAGCTGCAGGTCATaGTCAAAGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRSCRS*SKALRV
Trigger: GACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGGGACACGAGGAGCTaGAGGTCATGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVWDTRS*RSCSKA
Trigger: AGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAAGCTCTTTCCAACCCTaGAGCACCTCCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSSFQP*STSCSR
Trigger: CCGGGAGCAGGAGGTGCTGCAGGGTTGGAAAGAGCT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCTGTGGAGCTGACATaGAGGCGGGCATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAVELT*RRASSQ
Trigger: CTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGCTGTGGAGCTGACATaGAGGCGGGCATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIAVELT*RRASSQ
Trigger: CTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGCTGTGGAGCTGACATaGAGGCGGGCATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQAVELT*RRASSQ
Trigger: CTGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACAGCTTGTCCAGCTGTaGCTGGATCTCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSQLVQL*LDLISH
Trigger: ATGGCTGATGAGATCCAGGCACAGCTGGACAAGCTG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAACCTCCAGCATCTGCTaGAGCCACTCCCAATGGCGG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCITSSIC*SHSQWR
Trigger: CCGCCATTGGGAGTGGCTGCAGCAGATGCTGGAGGT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGCACCTCCAGCATCTaGTGCAGCCACTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGACTSSI*CSHSQW
Trigger: CCATTGGGAGTGGCTGCAGCAGATGCTGGAGGTGCA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCTGGGCAAACTGGTaGACCTCCAGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSWANW*TSSICC
Trigger: GCAGCAGATGCTGGAGGTGCACCAGTTTGCCCAGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGTGGGGTAGGCGGCTaGTTGCTCTGTTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSGVGG*LLCSAL
Trigger: CAAAGCGGAACAGAGCAAGCAGCCGCCTACCCCACT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCCGGCAGCCGGTCAATaGGCGGCTGGAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHPAAGQ*AAGGAR
Trigger: CCGAGCGCCTCCAGCCGCGCATTGACCGGCTGCCGG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCTTTGTGCCCACAGTaGGGAAAAGAGGGGAGACGA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSLCPQ*GKEGRR
Trigger: TCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCACCAGCGCCCCCGTaGCCATCCCTAGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSPAPP*PSLGQR
Trigger: TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGACTCCCCAGGGAGGTaGTCCAGCCAGAAGCATGCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRDSPGR*SSQKHA
Trigger: TGCATGCTTCTGGCTGGAGCACCTCCCTGGGGAGTC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATGTCACCCACAGTCCTaGTTGCCCTCCGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCICHPQS*LPSGSL
Trigger: CAGTGACCCGGAGGGCAAGCAGGACTGTGGGTGACA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000392025.5
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCAGCGGACAGAAGGATaGCCCATGACCGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNQRTEG*PMTEVP
Trigger: GGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGATGGACTTCTCATCTaGAGCCTCCATGTTCACATC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRDGLLI*SLHVHI
Trigger: GATGTGAACATGGAGGCTCCAGATGAGAAGTCCATC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTTCGTGTTTCTTCATaGCTGCCTCCACTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLRVSS*LPPLRA
Trigger: TGCCCGCAGTGGAGGCAGCCATGAAGAAACACGAAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGTTAGCAGGGCCCACTaGCGCAGGACGCTGTCACGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTVSRAH*RRTLSR
Trigger: GCGTGACAGCGTCCTGCGCCAGTGGGCCCTGCTAAC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGAGGCAGCCGTGCACGTaGTTCACGCGGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRRQPCT*FTRLQM
Trigger: CATCTGCAACCGCGTGAACCACGTGCACGGCTGCCT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAATCCGGCACACGCATaGAGAGCAGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVNPAHA*RAAIAP
Trigger: AGGAGCAATGGCTGCTCTCCATGCGTGTGCCGGATT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGGCTGTTCATCTCTTaGTCCAGGCTCTCGAATCGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRLFIS*SRLSNR
Trigger: CCGATTCGAGAGCCTGGACCAAGAGATGAACAGCCT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGCTCCTGGACTGTGTaGTTCACGTCCAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASSWTV*FTSRTR
Trigger: CCGCGTTCTGGACGTGAACCACACAGTCCAGGAGCT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCTCCTGGACTGTGTaGTTCACGTCCAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSSWTV*FTSRTR
Trigger: CCGCGTTCTGGACGTGAACCACACAGTCCAGGAGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCTTCCACCAGCTCCTaGACTGTGTGGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPSTSS*TVWFTS
Trigger: GGACGTGAACCACACAGTCCAGGAGCTGGTGGAAGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCATCTGAACTGGGGTaGCCTCCTTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSSELG*PPSTSS
Trigger: GGAGCTGGTGGAAGGAGGCCACCCCAGTTCAGATGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCATCTGAACTGGGGTaGCCTCCTTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSSELG*PPSTSS
Trigger: GGAGCTGGTGGAAGGAGGCCACCCCAGTTCAGATGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCACCTCATCTGAACTaGGGTGGCCTCCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLAPHLN*GGLLPP
Trigger: TGGTGGAAGGAGGCCACCCCAGTTCAGATGAGGTGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCACCTCATCTGAACTaGGGTGGCCTCCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAPHLN*GGLLPP
Trigger: TGGTGGAAGGAGGCCACCCCAGTTCAGATGAGGTGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACACCTGCTGTTGAGGTaGTCCTGGCAGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIHLLLR*SWQERT
Trigger: GGTGCGTTCCTGCCAGGACCACCTCAACAGCAGGTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCTCTTCTAGGCTGTTaGGCAGGGGCCCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPLLGC*AGAPRC
Trigger: GCAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGACAGCGCCATCTCCTaGTTACGCAGCACCACGAGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIDSAIS*LRSTTS
Trigger: GCTCGTGGTGCTGCGTAACCAGGAGATGGCGCTGTC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCTGCATCTTTTGCTaGCTCAGCTCCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLTCIFC*LSSMVV
Trigger: CACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCTGCATCAGTTGCTaGCCCTCCCGCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSCISC*PSRSIF
Trigger: GAAGATCGAGCGGGAGGGCCAGCAACTGATGCAGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGCTCCGCCCAGCACTaGCGGATCTCGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSSAQH*RISPSF
Trigger: GAAGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGCTCCGCCCAGCACTaGCGGATCTCGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSSAQH*RISPSF
Trigger: GAAGCTGGGCGAGATCCGCCAGTGCTGGGCGGAGCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCTGGTCTGCTTTGCTaGCCTCAAAGAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAGLLC*PQRAAV
Trigger: CACGGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNPGATP*KPAASG
Trigger: GCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIPGATP*KPAASG
Trigger: GCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTGTCTGCATGGCCAGTaGCAGCCGCTCCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRCLHGQ*QPLLNP
Trigger: TGGGTTCAGGAGCGGCTGCCACTGGCCATGCAGACA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGTCTGCATGGCCAGTaGCAGCCGCTCCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQCLHGQ*QPLLNP
Trigger: TGGGTTCAGGAGCGGCTGCCACTGGCCATGCAGACA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRTWRLS*YSQYCC
Trigger: ACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCAAGCTCGCTCACCTaGCGGCTGAGCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSSSLT*RLSWYS
Trigger: GCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGACATGCTCAAAGTCCTaGCCGAGCTCGGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLTCSKS*PSSGEP
Trigger: TGGCTCACCCGAGCTCGGCCAGGACTTTGAGCATGT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGCTCATCCACCATCTaGTTCACAGCTGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSSSTI*FTAASR
Trigger: ACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCATGGAACTGGCACTaGGTCTCGGCTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSAWNWH*VSAQAG
Trigger: CCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTGCATGGAACTGGCACTaGGTCTCGGCTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGAWNWH*VSAQAG
Trigger: CCCCGCCTGAGCCGAGACCCAGTGCCAGTTCCATGC...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCCGCTGCATGGAACTaGCACTGGGTCTCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISAAWN*HWVSAQ
Trigger: CTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCGCTGCATGGAACTaGCACTGGGTCTCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSAAWN*HWVSAQ
Trigger: CTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCAGGGTCCGCTGCATaGAACTGGCACTGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSGSAA*NWHWVS
Trigger: CGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCGCGGACTTGGCTGTaGAAGCGCAGGGCGTCGGCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSRTWL*KRRASA
Trigger: AGCCGACGCCCTGCGCTTCCACAGCCAAGTCCGCGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCTGCCCCAATCTGGCTaGCGATGCCATCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRLPQSG*RCHPSR
Trigger: CCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACTGCCCCAATCTGGCTaGCGATGCCATCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQLPQSG*RCHPSR
Trigger: CCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCGGCTGCCCCAATCTaGCTGGCGATGCCATCCATC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSAAPI*LAMPSI
Trigger: GATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCGGCTGCCCCAATCTaGCTGGCGATGCCATCCATC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSAAPI*LAMPSI
Trigger: GATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATTGTCCAGCTGTGCCTaGATCTCATCAGCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLSSCA*ISSAMA
Trigger: TGCCATGGCTGATGAGATCCAGGCACAGCTGGACAA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGCAGCCACTCCCAATaGCGGTCCCACTTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLCSHSQ*RSHFSD
Trigger: GTCGGAAAAGTGGGACCGCCATTGGGAGTGGCTGCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATGGCCGCCAGTTCCGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIWPPVP*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACGGAACTGGCGGCCA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCAGGCCGCCGCCTCCTaGGCAGCTCCTCCGCGCGAT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHQAAAS*AAPPRD
Trigger: ATCGCGCGGAGGAGCTGCCCAGGAGGCGGCGGCCTG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCAGCTCAAGCCCGTTaGGCAGGCGACCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSAAQAR*AGDLGE
Trigger: TTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGTAGTGGGTAGTGTCTaGCCCCAGCGGGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIVVGSV*PQRAIS
Trigger: AGAGATCGCCCGCTGGGGCCAGACACTACCCACTAC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAACTTCCTGCGCCCGCTaGCCCTGCGATCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTTSCAR*PCDLRL
Trigger: AAGGCGGAGATCGCAGGGCCAGCGGGCGCAGGAAGT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACTCCCCACCACTTCTTaGGGTGCAGGAGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCILPTTS*GAGEVP
Trigger: GGGGACTTCTCCTGCACCCCAAGAAGTGGTGGGGAG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGACCACCCCAGCTTCTTaGGGCAGGATCTGCAGATCG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRTTPAS*GRICRS
Trigger: CGATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCCTCCCCTCATGAAGTaGCATTTACAACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLPPLMK*HLQLEG
Trigger: CCCCTCCAGTTGTAAATGCCACTTCATGAGGGGAGG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATTCTCCAGGCGGCCATaGGGACTGCCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIFSRRP*GLPTTQ
Trigger: TTGGGTTGTGGGCAGTCCCCATGGCCGCCTGGAGAA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTTCTCCAGGCGGCCATaGGGACTGCCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRFSRRP*GLPTTQ
Trigger: TTGGGTTGTGGGCAGTCCCCATGGCCGCCTGGAGAA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAGGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNRSCAT*CNSLEA
Trigger: GGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRSCAT*CNSLEA
Trigger: GGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
3UTR CAA 72 bp AGCAGTGGGGTAGGCGGCTGCTTGCTCTGTTCCGCTTaGATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSGVGGCLLCSA*IFSIVVRRRRE
Trigger: CTCTCTGCGGCGCCTGACCACGATCGAGAAAATCAAAGCGGAACAGAGCAAGCAGCCGCCTACCCCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
3UTR CAA 72 bp CCGCTGGCCCTGCGATCTCCGCCTTCCCTCTTAGGGTaGCCCTCATCTGTGGATGAAGTAGTGGGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: PLALRSPPSLLG*PSSVDEVVGSV
Trigger: GACACTACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCGCAGGGCCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGAGTTGGCAAATTTCTaGTTGCTGATGAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSELANF*LLMRPT
Trigger: CGTGGGCCTCATCAGCAATCAGAAATTTGCCAACTC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGAGCCACTCCTTATTCTaGGCCAGCTCGGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSHSLF*ASSAMN
Trigger: ATTCATGGCCGAGCTGGCTCAGAATAAGGAGTGGCT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGGCCCTGGTTCTTTTTaGTGTGCTGCTGGACCGCCT +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNGPGSF*CAAGPP
Trigger: AGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGGCCCTGGTTCTTTTTaGTGTGCTGCTGGACCGCCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIGPGSF*CAAGPP
Trigger: AGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATGTCCTCACTCATCATaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCICPHSS*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGTCCTCACTCATCATaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQCPHSS*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTCGCTGGCAAACTCTaGGAATTTCTCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLAGKL*EFLLQH
Trigger: GTGCTGCAGGAGAAATTCTCAGAGTTTGCCAGCGAG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCACTGAAGAACTTATaGAGCTCCCGAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSLKNL*SSREAA
Trigger: GGCCGCCTCTCGGGAGCTTCATAAGTTCTTCAGTGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCACTGAAGAACTTATaGAGCTCCCGAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSLKNL*SSREAA
Trigger: GGCCGCCTCTCGGGAGCTTCATAAGTTCTTCAGTGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCTCAATCTGTCCCTaGAGCTCTCGGGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSSICP*SSRASL
Trigger: CAGTGACGCCCGAGAGCTTCAGGGACAGATTGAGGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCATGGCACTTTTGTTaGGCAGCAGAGATCGCCCCA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPWHFC*AAEIAP
Trigger: TGGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCATGGCACTTTTGTTaGGCAGCAGAGATCGCCCCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPWHFC*AAEIAP
Trigger: TGGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCAGCAGCCTCCTCGGATTaGTCGACTGACTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSAASSD*STDSCR
Trigger: GCGGCAAGAGTCAGTCGATCAATCCGAGGAGGCTGC...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCGCCCCTCCCCTCATaGAGTGGCATTTACAACTGG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASPLPS*SGIYNW
Trigger: CCAGTTGTAAATGCCACTTCATGAGGGGAGGGGCGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGTGAGGCTCAGAGGATaGCACAAGGTGTCACCCACA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRVRLRG*HKVSPT
Trigger: TGTGGGTGACACCTTGTGTCATCCTCTGAGCCTCAC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000392025.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCAAAGAGGCGACGGTTaGAGGCACGCAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRQRGDG*RHAVCS
Trigger: AGAGCAAACTGCGTGCCTGCAACCGTCGCCTCTTTG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCATGGCTGCCTCCACTaGGGGCAGCTCATACCCAAA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRHGCLH*GQLIPK
Trigger: TTTGGGTATGAGCTGCCCGCAGTGGAGGCAGCCATG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGTGTTTCTTCATGGCTaGCTCCACTGCGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIVFLHG*LHCGQL
Trigger: GAGCTGCCCGCAGTGGAGGCAGCCATGAAGAAACAC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGTGTTTCTTCATGGCTaGCTCCACTGCGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRVFLHG*LHCGQL
Trigger: GAGCTGCCCGCAGTGGAGGCAGCCATGAAGAAACAC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCTGTCACGCTGGGCTaGCACCCGCCGGATATCGTA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSAVTLG*HPPDIV
Trigger: TACGATATCCGGCGGGTGGCAGCCCAGCGTGACAGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGCAGTCCATGCTTCTaGAACAGGTCGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSSPCF*NRSSAS
Trigger: GGAGGCAGACGACCTGTTGCAGAAGCATGGACTGCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCAGTCCATGCTTCTaGAACAGGTCGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSSPCF*NRSSAS
Trigger: GGAGGCAGACGACCTGTTGCAGAAGCATGGACTGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCCACACCGCAGGGCCTaGTGCAGCAACGCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHPHRRA*CSNARR
Trigger: GCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTGTGG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCACCACCAGTGGCCCTaGGCCACTGGCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHHHQWP*ATGTPE
Trigger: CTCGGGGGTGCCAGTGGCGCAGGGCCACTGGTGGTG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGATGGAGAGCAGCCATTaGTCCTTCTCGCCGATCCAC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLMESSH*SFSPIH
Trigger: GTGGATCGGCGAGAAGGAGCAATGGCTGCTCTCCAT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGCTGGCCGCCACGATaGGAGCATAGTCTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRWPPR*EHSLPR
Trigger: GCGAGGAAGACTATGCTCGCATCGTGGCGGCCAGCG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAGCCGAGCAGTTTATaGCAGCCAAGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLKPSSL*QPSSRC
Trigger: ACACCTCGAACTTGGCTGGCATAAACTGCTCGGCTT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGGTGAGAAAGTCACGGTaGTGTTTCAAGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLVRKSR*CFKASS
Trigger: GGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCAC...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCAGTCTCGGAGGAAGTaGTGCAGCTCAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVQSRRK*CSSSWS
Trigger: TGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCCATGAATGCCTGGTaGCGGAGCCATCTCTTATGC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLAMNAW*RSHLLC
Trigger: GCATAAGAGATGGCTCCGGCACCAGGCATTCATGGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCCATGAATGCCTGGTaGCGGAGCCATCTCTTATGC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAAMNAW*RSHLLC
Trigger: GCATAAGAGATGGCTCCGGCACCAGGCATTCATGGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATTCTCCTGCATCAGTTaGTGGCCCTCCCGCTCGATC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIFSCIS*WPSRSI
Trigger: GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCTCCTGCATCAGTTaGTGGCCCTCCCGCTCGATC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQFSCIS*WPSRSI
Trigger: GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAAGTTCGGGCTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGAGTTCGGGCTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACTGGCCTCAAAGAGCTaGCGTGCCTTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTLASKS*RALAWV
Trigger: CACCCAGGCCAAGGCACGGCAGCTCTTTGAGGCCAG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCAGCTGGTCTGCTTTaGTGGCCTCAAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNPAGLL*WPQRAA
Trigger: GGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCCAGCTGGTCTGCTTTaGTGGCCTCAAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRPAGLL*WPQRAA
Trigger: GGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACAAGCGGCGGCGCTCCTaGAACGGCTCGAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHKRRRS*NGSSRR
Trigger: GCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTTCTTTTTGATGTGCTaGTGGACCGCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLFFLMC*WTACKP
Trigger: CGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCAGGCGCTCTGCAGCTaGTCCAGGCCCCGGCGCACT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHQALCS*SRPRRT
Trigger: AGTGCGCCGGGGCCTGGAGCAGCTGCAGAGCGCCTG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCGACAGCTGCGCGATaGTTTCCTCGTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRATAAR*FPRSSP
Trigger: TGGAGAACTACGAGGAAAGCATCGCGCAGCTGTCGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGGTACAGCCAGTACTaGTGTTCCAGAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQWYSQY*CSRATR
Trigger: CCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTGGTACAGCCAGTACTaGTGTTCCAGAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRWYSQY*CSRATR
Trigger: CCGGGTGGCTCTGGAACAGCAGTACTGGCTGTACCA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCAGCACCGAGACATaGTCAAAGTCCTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQCSTET*SKSWPS
Trigger: GCTCGGCCAGGACTTTGAGCATGTCTCGGTGCTGCA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATGCAGCACCGAGACATaGTCAAAGTCCTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCICSTET*SKSWPS
Trigger: GCTCGGCCAGGACTTTGAGCATGTCTCGGTGCTGCA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGGGACACGAGGAGCTaGAGGTCATGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLWDTRS*RSCSKA
Trigger: AGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCAAGCTCTTTCCAACCCTaGAGCACCTCCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSSSFQP*STSCSR
Trigger: CCGGGAGCAGGAGGTGCTGCAGGGTTGGAAAGAGCT...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCCAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISQSGWR*HPSRRA
Trigger: TGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTG...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCAACCTCCAGCATCTGCTaGAGCCACTCCCAATGGCGG +
Preference number: 4 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSTSSIC*SHSQWR
Trigger: CCGCCATTGGGAGTGGCTGCAGCAGATGCTGGAGGT...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCCTGGGCAAACTGGTaGACCTCCAGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISWANW*TSSICC
Trigger: GCAGCAGATGCTGGAGGTGCACCAGTTTGCCCAGGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTGTCGCCGGATAAGCTaGTCCACCTCATCCACGCTG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRCRRIS*STSSTL
Trigger: CAGCGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCTCTCTTCCCAGGCTaGAGCCGCTTTGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPLFPG*SRFAEG
Trigger: GCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCTCTCTTCCCAGGCTaGAGCCGCTTTGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPLFPG*SRFAEG
Trigger: GCCTTCCGCAAAGCGGCTGCAGCCTGGGAAGAGAGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATGTTCGCTGGACTCCTaGCGCTCCAAGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTCSLDS*RSKRRS
Trigger: TGAGCGGCGCTTGGAGCGGCAGGAGTCCAGCGAACA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTTGTTCGCTGGACTCCTaGCGCTCCAAGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGCSLDS*RSKRRS
Trigger: TGAGCGGCGCTTGGAGCGGCAGGAGTCCAGCGAACA...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGTCGAGCTCGCGCTTaGGCAGTAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRRARA*AVGSPR
Trigger: ACGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGTGTGTGCTCCCGGATaGCGGGCCCTTGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSVCAPG*RALGVL
Trigger: AAGGACTCCAAGGGCCCGGCATCCGGGAGCACACAC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTTCGCTGGTGGCCTTGTaGAGGCTGAGCAGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLSLVAL*RLSSGS
Trigger: GGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGA...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGAGCAAAAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVGAKTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTTTTGCTCC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCCCCTCCTTTCCGGTaGCCACCATGTCACGCGTCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSPPFR*PPCHAS
Trigger: GGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCACCACTTCTTGGGGTaGAGGAGAAGTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRHHFLG*RRSPLL
Trigger: AAGGAGGGGACTTCTCCTGCACCCCAAGAAGTGGTG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCACCACTTCTTGGGGTaGAGGAGAAGTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLHHFLG*RRSPLL
Trigger: AAGGAGGGGACTTCTCCTGCACCCCAAGAAGTGGTG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGGGAGACCAGACGCTaGTTCTCATTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRWETRR*FSFSQL
Trigger: GAGCTGGCTGAATGAGAACCAGCGTCTGGTCTCCCA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCTTCGTGTTTCTTCATaGCTGCCTCCACTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGALRVSS*LPPLRA
Trigger: TGCCCGCAGTGGAGGCAGCCATGAAGAAACACGAAG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGCGCCAGGCGGCGGCTaGAAGCTTCGTCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHAPGGG*KLRRGR
Trigger: TCGGCCACGACGAAGCTTCCAGCCGCCGCCTGGCGC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTCCGAGTGTCGCCAGCTaGCGCCGCAGGCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFPSVAS*RRRPLT
Trigger: CGTGAGCGGCCTGCGGCGCCAGCTGGCGACACTCGG...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAATCCGGCACACGCATaGAGAGCAGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRNPAHA*RAAIAP
Trigger: AGGAGCAATGGCTGCTCTCCATGCGTGTGCCGGATT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGCTCCTGGACTGTGTaGTTCACGTCCAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISSWTV*FTSRTR
Trigger: CCGCGTTCTGGACGTGAACCACACAGTCCAGGAGCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCATCTGAACTGGGGTaGCCTCCTTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISSELG*PPSTSS
Trigger: GGAGCTGGTGGAAGGAGGCCACCCCAGTTCAGATGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCTGTTGAGGTGGTCCTaGCAGGAACGCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLLRWS*QERTSS
Trigger: AGATGAGGTGCGTTCCTGCCAGGACCACCTCAACAG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCTGTTGAGGTGGTCCTaGCAGGAACGCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRLLRWS*QERTSS
Trigger: AGATGAGGTGCGTTCCTGCCAGGACCACCTCAACAG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCTGTTGAGGTGGTCCTaGCAGGAACGCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGALLRWS*QERTSS
Trigger: AGATGAGGTGCGTTCCTGCCAGGACCACCTCAACAG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGACCTGCATCTTTTGCTaGCTCAGCTCCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLTCIFC*LSSMVV
Trigger: CACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGT...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACGTAACTGGTTTTCTTaGTTCTTCTCCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSRNWFS*FFSSSR
Trigger: CCGGCTGCTGGAGAAGAACCAAGAAAACCAGTTACG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGCTGGGCCCGTAACTaGTTTTCTTGGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCWARN*FSWFFS
Trigger: GGAGAAGAACCAAGAAAACCAGTTACGGGCCCAGCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATTTTGCATCCATTGCTaGGCCCGTAACTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRFCIHC*ARNWFS
Trigger: AGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATGCTGCAGCTCAAGTTaGTCATGTAGCTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRCCSSS*SCSFCI
Trigger: GATGCAAAAGCTACATGACCAACTTGAGCTGCAGCA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGTGCTGCAGCTCAAGTTaGTCATGTAGCTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVCCSSS*SCSFCI
Trigger: GATGCAAAAGCTACATGACCAACTTGAGCTGCAGCA...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCTCTTATGCAGCTTGTaGTTGTCCTCCCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLLCSL*LSSRVP
Trigger: TGGCACGCGGGAGGACAACCACAAGCTGCATAAGAG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCTGCATCAGTTGCTaGCCCTCCCGCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSCISC*PSRSIF
Trigger: GAAGATCGAGCGGGAGGGCCAGCAACTGATGCAGGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGAGCTGCCGTGCCTTaGCCTGGGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRAAVP*PGWCSP
Trigger: TGGAGAGCACCACCCAGGCCAAGGCACGGCAGCTCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCTGGTCTGCTTTGCTaGCCTCAAAGAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRAGLLC*PQRAAV
Trigger: CACGGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGCTGGTCTGCTTTGCTaGCCTCAAAGAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQAGLLC*PQRAAV
Trigger: CACGGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQTWRLS*YSQYCC
Trigger: ACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAACATGCTCAAAGTCCTaGCCGAGCTCGGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQTCSKS*PSSGEP
Trigger: TGGCTCACCCGAGCTCGGCCAGGACTTTGAGCATGT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCCAGCTGTGCCTaGATCTCATCAGCCATGGCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVLSSCA*ISSAMA
Trigger: TGCCATGGCTGATGAGATCCAGGCACAGCTGGACAA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGTGCAGGAGCGGCTCCTaGGCTGTCAGCCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMCRSGS*AVSQAS
Trigger: TGATGCCTGGCTGACAGCCCAGGAGCCGCTCCTGCA...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCATGGCCGCCAGTTCCGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSWPPVP*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACGGAACTGGCGGCCA...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGTCGGGCTTGAGCTCCTaGCGCACATACCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMSGLSS*RTYPTR
Trigger: TCGGGTGGGGTATGTGCGCCAGGAGCTCAAGCCCGA...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCCGCCAGCTGGTGGTaGAATTCTGGATGTTTACCT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPASWW*NSGCLP
Trigger: AGGTAAACATCCAGAATTTCACCACCAGCTGGCGGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACTCGACGTCGTCGAGTaGATCCGGCACACGCATGGA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTLDVVE*IRHTHG
Trigger: TCCATGCGTGTGCCGGATTCACTCGACGACGTCGAG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTCGACGTCGTCGAGTaGATCCGGCACACGCATGGA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLDVVE*IRHTHG
Trigger: TCCATGCGTGTGCCGGATTCACTCGACGACGTCGAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGGAACGCACCTCATCTaGACTGGGGTGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSGTHLI*TGVASF
Trigger: GAAGGAGGCCACCCCAGTTCAGATGAGGTGCGTTCC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCAGCTCCATGGTGGTaGGAAAGTCACGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSAPWW*ESHGAV
Trigger: AACAGCACCGTGACTTTCTCACCACCATGGAGCTGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCCACTCCTTATTCTaGGCCAGCTCGGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSHSLF*ASSAMN
Trigger: ATTCATGGCCGAGCTGGCTCAGAATAAGGAGTGGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCACTGAAGAACTTATaGAGCTCCCGAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSLKNL*SSREAA
Trigger: GGCCGCCTCTCGGGAGCTTCATAAGTTCTTCAGTGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCACTGAAGAACTTATaGAGCTCCCGAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSLKNL*SSREAA
Trigger: GGCCGCCTCTCGGGAGCTTCATAAGTTCTTCAGTGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGCTCTCGGGCGTCACTaGAGAACTTATGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIALGRH*RTYEAP
Trigger: GGGAGCTTCATAAGTTCTTCAGTGACGCCCGAGAGC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGCTCTCGGGCGTCACTaGAGAACTTATGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQALGRH*RTYEAP
Trigger: GGGAGCTTCATAAGTTCTTCAGTGACGCCCGAGAGC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCTCTCGGGCGTCACTaGAGAACTTATGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRALGRH*RTYEAP
Trigger: GGGAGCTTCATAAGTTCTTCAGTGACGCCCGAGAGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCCATGGCACTTTTGTTaGGCAGCAGAGATCGCCCCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRPWHFC*AAEIAP
Trigger: TGGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGCTCTGTTCCGCTTTaGTTTTCTCGATCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLCSVPL*FSRSWS
Trigger: TGACCACGATCGAGAAAATCAAAGCGGAACAGAGCA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTCGGATTGATCGACTaGCTCTTGCCGCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLGLID*LLPLRP
Trigger: CGGCCTGAGCGGCAAGAGTCAGTCGATCAATCCGAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCTCGGATTGATCGACTaGCTCTTGCCGCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVLGLID*LLPLRP
Trigger: CGGCCTGAGCGGCAAGAGTCAGTCGATCAATCCGAG...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCGCCCCTCCCCTCATaGAGTGGCATTTACAACTGG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSPLPS*SGIYNW
Trigger: CCAGTTGTAAATGCCACTTCATGAGGGGAGGGGCGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGTGAGGCTCAGAGGATaGCACAAGGTGTCACCCACA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRVRLRG*HKVSPT
Trigger: TGTGGGTGACACCTTGTGTCATCCTCTGAGCCTCAC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000392025.5
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGCCATCGGGGAAGGTaGGGCTCAGAGGATGACACA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRHRGR*GSEDDT
Trigger: TGTGTCATCCTCTGAGCCTCACCTTCCCCGATGGCG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000392025.5
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACAGAAGGATGCCCCATaGCCGAAGTCCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQQKDAP*PKSPMT
Trigger: TGTCATTGGGGACTTCGGTCATGGGGCATCCTTCTG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGTGAAAGCCTGGAGTTaGTGCTGCACCCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLVKAWS*CCTPLK
Trigger: CTTAAGTGGGGTGCAGCAGCAACTCCAGGCTTTCAC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGTGAAAGCCTGGAGTTaGTGCTGCACCCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRVKAWS*CCTPLK
Trigger: CTTAAGTGGGGTGCAGCAGCAACTCCAGGCTTTCAC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCAAAGAGGCGACGGTTaGAGGCACGCAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRQRGDG*RHAVCS
Trigger: AGAGCAAACTGCGTGCCTGCAACCGTCGCCTCTTTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACAAAGAGGCGACGGTTaGAGGCACGCAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIQRGDG*RHAVCS
Trigger: AGAGCAAACTGCGTGCCTGCAACCGTCGCCTCTTTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGTAGGCCGCAATGTCTaGCTCGATCGCTTCGTGTTT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRVGRNV*LDRFVF
Trigger: AAACACGAAGCGATCGAGGCAGACATTGCGGCCTAC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGTAGTAGCCTTCGGCTaGCAATGCCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTVVAFG*QCLGQL
Trigger: GAGCTGGCCCAGGCATTGGCAGCCGAAGGCTACTAC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCCTGGAAGACCTTCTaGAGGGCAAGGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSWKTF*RARFCS
Trigger: TGAGCAGAACCTTGCCCTGCAGAAGGTCTTCCAGGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCCTGGAAGACCTTCTaGAGGGCAAGGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASWKTF*RARFCS
Trigger: TGAGCAGAACCTTGCCCTGCAGAAGGTCTTCCAGGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACCCTCCAGCAGTCCATaGTTCTGCAACAGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIPSSSP*FCNRSS
Trigger: AGACGACCTGTTGCAGAAGCATGGACTGCTGGAGGG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGCCTCCTCCAGCTCCTaGAGCAGCGCCCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHASSSS*SSAHRL
Trigger: GAGCCTGTGGGCGCTGCTGCAGGAGCTGGAGGAGGC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACACAGCTCACACGCGTaGACCTCGCCAAACATGCGG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHSSHA*TSPNMR
Trigger: CCGCATGTTTGGCGAGGTGCACGCGTGTGAGCTGTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTCTCGAATCGGTGCTaGACCACCTCGACGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLSNRC*TTSTSS
Trigger: CGACGACGTCGAGGTGGTGCAGCACCGATTCGAGAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGGCTCTCGAATCGGTaGTGCACCACCTCGACGTCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRLSNR*CTTSTS
Trigger: CGACGTCGAGGTGGTGCAGCACCGATTCGAGAGCCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCGCTCATTTCCTCTTTaGGCTGTTCCACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVRSFPL*AVPLAP
Trigger: TGGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGTGAGAAAGTCACGGTaGTGTTTCAAGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAVRKSR*CFKASS
Trigger: GGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCAC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGTGAGAAAGTCACGGTaGTGTTTCAAGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRVRKSR*CFKASS
Trigger: GGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCAC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCCACCTGCATCTTTTaGTGGCTCAGCTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRATCIF*WLSSMV
Trigger: CACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCCTGCACGGCCACCTaGATCTTTTGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTACTAT*IFCWLS
Trigger: GCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGGCCCTCTGCAGCCTaGACGGCCACCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRPSAA*TATCIF
Trigger: AAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSFCIH*WARNWF
Trigger: AAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSFCIH*WARNWF
Trigger: AAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCAGTCTCGGAGGAAGTaGTGCAGCTCAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRQSRRK*CSSSWS
Trigger: TGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCGGAGCCATCTCTTATaGAGCTTGTGGTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRSHLL*SLWLSS
Trigger: GGAGGACAACCACAAGCTGCATAAGAGATGGCTCCG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGCCATGAATGCCTGGTaGCGGAGCCATCTCTTATGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIAMNAW*RSHLLC
Trigger: GCATAAGAGATGGCTCCGGCACCAGGCATTCATGGC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCCATGAATGCCTGGTaGCGGAGCCATCTCTTATGC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNAMNAW*RSHLLC
Trigger: GCATAAGAGATGGCTCCGGCACCAGGCATTCATGGC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACAGCTCGGCCATGAATaGCTGGTGCCGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTQLGHE*LVPEPS
Trigger: AGATGGCTCCGGCACCAGGCATTCATGGCCGAGCTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGCTCAGCAAAGCTCTaGACCAGCTGGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSSAKL*TSWSAL
Trigger: CAAAGCAGACCAGCTGGTGCAGAGCTTTGCTGAGCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGCTCAGCAAAGCTCTaGACCAGCTGGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSSAKL*TSWSAL
Trigger: CAAAGCAGACCAGCTGGTGCAGAGCTTTGCTGAGCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCACCCACCAGCTCCTTaGTCGCCGGCTCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHHPPAP*SPAPAA
Trigger: TGCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCGTGCGCCACCTGGTaGAACTCCTTGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSCATW*NSLEAS
Trigger: GCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTCCGCCTGCAAACCGTTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLPPANR*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGG...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTCTTTTTGATGTGCTaGTGGACCGCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVFFLMC*WTACKP
Trigger: CGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGGTTCTTTTTGATGTaGTGCTGGACCGCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLWFFLM*CWTACK
Trigger: TTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGCTCTGTTCGTCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVCSVRP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGACGAACAGAGCA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCGACAGCTGCGCGATaGTTTCCTCGTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNATAAR*FPRSSP
Trigger: TGGAGAACTACGAGGAAAGCATCGCGCAGCTGTCGC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTTCTCGGCAATCCAGTaGTCAAGCTCGCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNFSAIQ*SSSLTW
Trigger: CCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATTCTCGGCAATCCAGTaGTCAAGCTCGCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIFSAIQ*SSSLTW
Trigger: CCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCTGAGAATTTCTCCTaGAGCACCGAGACATGCTCA +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSENFS*STETCS
Trigger: TGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGGGCCATGGTGGCCGCTaGTGTATGGCCACACTCGAT +
Preference number: 4 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQGHGGR*CMATLD
Trigger: ATCGAGTGTGGCCATACAGCAGCGGCCACCATGGCC...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGGCCATGGTGGCCGCTaGTGTATGGCCACACTCGAT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSGHGGR*CMATLD
Trigger: ATCGAGTGTGGCCATACAGCAGCGGCCACCATGGCC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCTCTCAGGGTCCGCTaGATGGAACTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTALRVR*MELALG
Trigger: ACCCAGTGCCAGTTCCATGCAGCGGACCCTGAGAGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGGAGCTGCAGGTCATaGTCAAAGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRSCRS*SKALRV
Trigger: GACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAAGGAGCTGCAGGTCATaGTCAAAGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQRSCRS*SKALRV
Trigger: GACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGGGACACGAGGAGCTaGAGGTCATGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQWDTRS*RSCSKA
Trigger: AGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRQSGWR*HPSRRA
Trigger: TGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQQSGWR*HPSRRA
Trigger: TGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCAGCTTGTCCAGCTGTaGCTGGATCTCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRQLVQL*LDLISH
Trigger: ATGGCTGATGAGATCCAGGCACAGCTGGACAAGCTG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCATGTCGCCGGATAAGCTaGTCCACCTCATCCACGCTG +
Preference number: 4 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSCRRIS*STSSTL
Trigger: CAGCGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGAGCAAAAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRGAKTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTTTTGCTCC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCACCACTTCTTGGGGTaGAGGAGAAGTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRHHFLG*RRSPLL
Trigger: AAGGAGGGGACTTCTCCTGCACCCCAAGAAGTGGTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTCTGAGGCGGCGGAGTaGAGGGGGCTAGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSEAAE*RGLGPL
Trigger: AAGGGGCCCTAGCCCCCTGCACTCCGCCGCCTCAGA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGACTCCCCAGGGAGGTaGTCCAGCCAGAAGCATGCA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTDSPGR*SSQKHA
Trigger: TGCATGCTTCTGGCTGGAGCACCTCCCTGGGGAGTC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGACTCCCCAGGGAGGTaGTCCAGCCAGAAGCATGCA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSDSPGR*SSQKHA
Trigger: TGCATGCTTCTGGCTGGAGCACCTCCCTGGGGAGTC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCCACCTCCAATACCTaGTCCAAGACCTTCCCGATA +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPTSNT*SKTFPI
Trigger: TATCGGGAAGGTCTTGGACCAGGTATTGGAGGTGGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCCACCTCCAATACCTaGTCCAAGACCTTCCCGATA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPTSNT*SKTFPI
Trigger: TATCGGGAAGGTCTTGGACCAGGTATTGGAGGTGGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTACCCAAAGTTGTCCTaGGAGACCAGACGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLYPKLS*ETRRWF
Trigger: GAACCAGCGTCTGGTCTCCCAGGACAACTTTGGGTA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGGCAGCCGTGCACGTaGTTCACGCGGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRQPCT*FTRLQM
Trigger: CATCTGCAACCGCGTGAACCACGTGCACGGCTGCCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGAGGCAGCCGTGCACGTaGTTCACGCGGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMRQPCT*FTRLQM
Trigger: CATCTGCAACCGCGTGAACCACGTGCACGGCTGCCT...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAATCCGGCACACGCATaGAGAGCAGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCINPAHA*RAAIAP
Trigger: AGGAGCAATGGCTGCTCTCCATGCGTGTGCCGGATT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACACCTGCTGTTGAGGTaGTCCTGGCAGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHLLLR*SWQERT
Trigger: GGTGCGTTCCTGCCAGGACCACCTCAACAGCAGGTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGACAGCGCCATCTCCTaGTTACGCAGCACCACGAGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSDSAIS*LRSTTS
Trigger: GCTCGTGGTGCTGCGTAACCAGGAGATGGCGCTGTC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACAGCCATCCAGCTCGTaGCAGTCTCGGAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTQPSSS*QSRRKC
Trigger: GCACTTCCTCCGAGACTGCCACGAGCTGGATGGCTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCAGCCATCCAGCTCGTaGCAGTCTCGGAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSQPSSS*QSRRKC
Trigger: GCACTTCCTCCGAGACTGCCACGAGCTGGATGGCTG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGATCAGCATCTTCTCATaGATCCAGCCATCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVISIFS*IQPSSS
Trigger: CGAGCTGGATGGCTGGATCCATGAGAAGATGCTGAT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGATCAGCATCTTCTCATaGATCCAGCCATCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLISIFS*IQPSSS
Trigger: CGAGCTGGATGGCTGGATCCATGAGAAGATGCTGAT...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCTCTTATGCAGCTTGTaGTTGTCCTCCCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNLLCSL*LSSRVP
Trigger: TGGCACGCGGGAGGACAACCACAAGCTGCATAAGAG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCGGCCATGAATGCCTaGTGCCGGAGCCATCTCTTA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSAMNA*CRSHLL
Trigger: TAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCGGCCATGAATGCCTaGTGCCGGAGCCATCTCTTA +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSAMNA*CRSHLL
Trigger: TAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPGATP*KPAASG
Trigger: GCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPGATP*KPAASG
Trigger: GCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAGGGTGGCCTTCCCCTTGACCAGGTCTCCTCTGATGGGCATCTCCTGTTCGTTTTTGATGTGCTGCTaGACCGCCTGCAAACCGTTG +
Preference number: 4 (lower is better)
Translates to: ARVAFPLTRSPLMGISCSFLMCC*TACKPL
Trigger: CAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA...CGAACAGGAGATGCCCATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCAAGCTCGCTCACCTaGCGGCTGAGCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSSSLT*RLSWYS
Trigger: GCTGTACCAGCTCAGCCGCCAGGTGAGCGAGCTTGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGAGCTCATCCACCATCTaGTTCACAGCTGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSSSTI*FTAASR
Trigger: ACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAGCTCATCCACCATCTaGTTCACAGCTGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSSSTI*FTAASR
Trigger: ACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGCTCATCCACCATCTaGTTCACAGCTGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISSSTI*FTAASR
Trigger: ACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGTTCTTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTCCGCTGCATGGAACTaGCACTGGGTCTCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WFFLMCCWTACKPLPRSVSAAWN*HWVSAQ
Trigger: CTGAGCCGAGACCCAGTGCCAGTTCCATGCAGCGGA...GACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCAGGGTCCGCTGCATaGAACTGGCACTGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSGSAA*NWHWVS
Trigger: CGAGACCCAGTGCCAGTTCCATGCAGCGGACCCTGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTGCCCCAATCTGGCTaGCGATGCCATCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLPQSG*RCHPSR
Trigger: CCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACTGCCCCAATCTGGCTaGCGATGCCATCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTLPQSG*RCHPSR
Trigger: CCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTCTGCCCCAATCTGGCTaGCGATGCCATCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGLPQSG*RCHPSR
Trigger: CCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAG...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCGGCTGCCCCAATCTaGCTGGCGATGCCATCCATC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSAAPI*LAMPSI
Trigger: GATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTTGTCCAGCTGTGCCTaGATCTCATCAGCCATGGCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLSSCA*ISSAMA
Trigger: TGCCATGGCTGATGAGATCCAGGCACAGCTGGACAA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCCTCCTGGGCAAACTaGTGCACCTCCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSASWAN*CTSSIC
Trigger: GCAGATGCTGGAGGTGCACCAGTTTGCCCAGGAGGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTGCCTCCTGGGCAAACTaGTGCACCTCCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLASWAN*CTSSIC
Trigger: GCAGATGCTGGAGGTGCACCAGTTTGCCCAGGAGGC...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGGCCGCCAGTTCCGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSWPPVP*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACGGAACTGGCGGCCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTGCATCTCCTGTTCGCTaGACTCCTGCCGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGASPVR*TPAAPS
Trigger: GCTTGGAGCGGCAGGAGTCCAGCGAACAGGAGATGC...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCATCTCCTGTTCGCTaGACTCCTGCCGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSASPVR*TPAAPS
Trigger: GCTTGGAGCGGCAGGAGTCCAGCGAACAGGAGATGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGGATGCCGGGCCCTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRMPGP*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGTAGTGGGTAGTGTCTaGCCCCAGCGGGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTVVGSV*PQRAIS
Trigger: AGAGATCGCCCGCTGGGGCCAGACACTACCCACTAC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACTCCCCACCACTTCTTaGGGTGCAGGAGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTLPTTS*GAGEVP
Trigger: GGGGACTTCTCCTGCACCCCAAGAAGTGGTGGGGAG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATTCTCCAGGCGGCCATaGGGACTGCCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTFSRRP*GLPTTQ
Trigger: TTGGGTTGTGGGCAGTCCCCATGGCCGCCTGGAGAA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
3UTR CAA 72 bp CAGCTGCGCGATGCTTTCCTCGTAGTTCTCCACGCCTaGCTCCAGCTGCAGGTGTTTCTTGAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLRDAFLVVLHA*LQLQVFLEQLQ
Trigger: CTGCAGCTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGCATCGCGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGAGTTGGCAAATTTCTaGTTGCTGATGAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAELANF*LLMRPT
Trigger: CGTGGGCCTCATCAGCAATCAGAAATTTGCCAACTC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCGTGCAATAGGCCGTaGAAGCCTGGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTACNRP*KPGVAA
Trigger: AGCAGCAACTCCAGGCTTTCACGGCCTATTGCACGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCAGCTCCATGGTGGTaGGAAAGTCACGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSAPWW*ESHGAV
Trigger: AACAGCACCGTGACTTTCTCACCACCATGGAGCTGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGCCACTCCTTATTCTaGGCCAGCTCGGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISHSLF*ASSAMN
Trigger: ATTCATGGCCGAGCTGGCTCAGAATAAGGAGTGGCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAAGCCACTCCTTATTCTaGGCCAGCTCGGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSHSLF*ASSAMN
Trigger: ATTCATGGCCGAGCTGGCTCAGAATAAGGAGTGGCT...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGGCCCTGGTTCTTTTTaGTGTGCTGCTGGACCGCCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTGPGSF*CAAGPP
Trigger: AGGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTACAGGCGGTCCACCTaGGACTGCCGCCGGCTGATC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHYRRST*DCRRLI
Trigger: GATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR TCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCTCGCTGGCAAACTCTaGGAATTTCTCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNLAGKL*EFLLQH
Trigger: GTGCTGCAGGAGAAATTCTCAGAGTTTGCCAGCGAG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACTCGCTGGCAAACTCTaGGAATTTCTCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCILAGKL*EFLLQH
Trigger: GTGCTGCAGGAGAAATTCTCAGAGTTTGCCAGCGAG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCCTCAATCTGTCCCTaGAGCTCTCGGGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSSICP*SSRASL
Trigger: CAGTGACGCCCGAGAGCTTCAGGGACAGATTGAGGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCCTGTTTCATGCTGTaGCATCCCATGGAGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNACFML*HPMERV
Trigger: TACCCTCTCCATGGGATGTCACAGCATGAAACAGGC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGCCAGCCCCAGGTGCTaGTCAGCTGTGCGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHASPRC*SAVRKA
Trigger: AGCCTTCCGCACAGCTGAGCAGCACCTGGGGCTGGC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAAAGCCTGGAGTTGCTaGTGCACCCCACTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIKAWSC*CTPLKE
Trigger: CTCCTTAAGTGGGGTGCAGCAGCAACTCCAGGCTTT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGAAAGCCTGGAGTTGCTaGTGCACCCCACTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRKAWSC*CTPLKE
Trigger: CTCCTTAAGTGGGGTGCAGCAGCAACTCCAGGCTTT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACATGGCTGCCTCCACTaGGGGCAGCTCATACCCAAA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHGCLH*GQLIPK
Trigger: TTTGGGTATGAGCTGCCCGCAGTGGAGGCAGCCATG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTGCCAGGCCTACCAGGTaGACGGTGTCTGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFARPTR*TVSAPG
Trigger: CCCGGGAGCAGACACCGTGCACCTGGTAGGCCTGGC...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGCGAACAACTGCTCTaGTTCCACCACGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSEQLL*FHHAHL
Trigger: CAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGCGAACAACTGCTCTaGTTCCACCACGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSEQLL*FHHAHL
Trigger: CAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTACCTCAGCGAACAACTaGTCTGCTTCCACCACGCGC +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGTSANN*SASTTR
Trigger: GCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGT...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCGCTCATTTCCTCTTTaGGCTGTTCCACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRSFPL*AVPLAP
Trigger: TGGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTCATGTAGGAAGCGCTaGAGGCGCCCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSCRKR*RRPAAA
Trigger: GGCGGCAGCAGGGCGCCTGCAGCGCTTCCTACATGA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAAGCCGAGCAGTTTATaGCAGCCAAGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLKPSSL*QPSSRC
Trigger: ACACCTCGAACTTGGCTGGCATAAACTGCTCGGCTT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCAGCCACCTGCATCTTTTaGTGGCTCAGCTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSATCIF*WLSSMV
Trigger: CACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGC...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACAGTCTCGGAGGAAGTaGTGCAGCTCAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIQSRRK*CSSSWS
Trigger: TGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACGGAGCCATCTCTTATaGAGCTTGTGGTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQRSHLL*SLWLSS
Trigger: GGAGGACAACCACAAGCTGCATAAGAGATGGCTCCG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCGGAGCCATCTCTTATaGAGCTTGTGGTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRRSHLL*SLWLSS
Trigger: GGAGGACAACCACAAGCTGCATAAGAGATGGCTCCG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATTCTCCTGCATCAGTTaGTGGCCCTCCCGCTCGATC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTFSCIS*WPSRSI
Trigger: GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCAGCTGGTCTGCTTTaGTGGCCTCAAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVPAGLL*WPQRAA
Trigger: GGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGG...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAGCTCAGCAAAGCTCTaGACCAGCTGGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSSAKL*TSWSAL
Trigger: CAAAGCAGACCAGCTGGTGCAGAGCTTTGCTGAGCT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGAGCTCAGCAAAGCTCTaGACCAGCTGGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSSAKL*TSWSAL
Trigger: CAAAGCAGACCAGCTGGTGCAGAGCTTTGCTGAGCT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGCAGCACCGAGACATaGTCAAAGTCCTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSCSTET*SKSWPS
Trigger: GCTCGGCCAGGACTTTGAGCATGTCTCGGTGCTGCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTGCCCCCTCCTGCAGCTaGCGTACCTGGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFAPSCS*RTWDTR
Trigger: CCTCGTGTCCCAGGTACGGCAGCTGCAGGAGGGGGC...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACAGCTTGTCCAGCTGTaGCTGGATCTCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIQLVQL*LDLISH
Trigger: ATGGCTGATGAGATCCAGGCACAGCTGGACAAGCTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGCACCTCCAGCATCTaGTGCAGCCACTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSCTSSI*CSHSQW
Trigger: CCATTGGGAGTGGCTGCAGCAGATGCTGGAGGTGCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTTCCTGGGCAAACTGGTaGACCTCCAGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGSWANW*TSSICC
Trigger: GCAGCAGATGCTGGAGGTGCACCAGTTTGCCCAGGA...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGTCGCCGGATAAGCTaGTCCACCTCATCCACGCTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSCRRIS*STSSTL
Trigger: CAGCGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTGTTCCCCACCGTGTGTaGTCCCGGATGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFVPHRV*SRMPGP
Trigger: AGGGCCCGGCATCCGGGAGCACACACGGTGGGGAAC...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCCAGCGGGCGATCTCTaGGTGTTCCGCCACCGAGGA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHPAGDL*VFRHRG
Trigger: TCCTCGGTGGCGGAACACGCAGAGATCGCCCGCTGG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCTTTGTGCCCACAGTaGGGAAAAGAGGGGAGACGA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSLCPQ*GKEGRR
Trigger: TCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCTCATAGCCACCTTGTaGTCAAACCTCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGALIATL*SNLCAS
Trigger: ACTGGCACAGAGGTTTGACCACAAGGTGGCTATGAG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCTCATAGCCACCTTGTaGTCAAACCTCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLIATL*SNLCAS
Trigger: ACTGGCACAGAGGTTTGACCACAAGGTGGCTATGAG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTACCCAAAGTTGTCCTaGGAGACCAGACGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRYPKLS*ETRRWF
Trigger: GAACCAGCGTCTGGTCTCCCAGGACAACTTTGGGTA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATACCCAAAGTTGTCCTaGGAGACCAGACGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIYPKLS*ETRRWF
Trigger: GAACCAGCGTCTGGTCTCCCAGGACAACTTTGGGTA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGATGTACACCATCTCCTaGAAGACCTTCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLMYTIS*KTFCRA
Trigger: TGCCCTGCAGAAGGTCTTCCAGGAGATGGTGTACAT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCAAATCCGGCACACGCATaGAGAGCAGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSNPAHA*RAAIAP
Trigger: AGGAGCAATGGCTGCTCTCCATGCGTGTGCCGGATT...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGGCTGTTCATCTCTTaGTCCAGGCTCTCGAATCGG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRLFIS*SRLSNR
Trigger: CCGATTCGAGAGCCTGGACCAAGAGATGAACAGCCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGCTCCTGGACTGTGTaGTTCACGTCCAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSSWTV*FTSRTR
Trigger: CCGCGTTCTGGACGTGAACCACACAGTCCAGGAGCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTTCATCTGAACTGGGGTaGCCTCCTTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLSSELG*PPSTSS
Trigger: GGAGCTGGTGGAAGGAGGCCACCCCAGTTCAGATGA...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTCCAGCAGCGCCTCGCTaGCCGCCACGATGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFPAAPR*PPRCEH
Trigger: ATGCTCGCATCGTGGCGGCCAGCGAGGCGCTGCTGG...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGACCTGCATCTTTTGCTaGCTCAGCTCCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRTCIFC*LSSMVV
Trigger: CACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCGTAACTGGTTTTCTTaGTTCTTCTCCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRNWFS*FFSSSR
Trigger: CCGGCTGCTGGAGAAGAACCAAGAAAACCAGTTACG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTTTTTGCATCCATTGCTaGGCCCGTAACTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: APEPMPARRPGRAPPGATFCIHC*ARNWFS
Trigger: AGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAA...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTGCTGCAGCTCAAGTTaGTCATGTAGCTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLCCSSS*SCSFCI
Trigger: GATGCAAAAGCTACATGACCAACTTGAGCTGCAGCA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTTCGGCCATGAATGCCTaGTGCCGGAGCCATCTCTTA +
Preference number: 4 (lower is better)
Translates to: IFSIVVRRRRELNLSSQASAMNA*CRSHLL
Trigger: TAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGA...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTTCCTGCATCAGTTGCTaGCCCTCCCGCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVSCISC*PSRSIF
Trigger: GAAGATCGAGCGGGAGGGCCAGCAACTGATGCAGGA...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTGCCGTGCCTTGGCCTaGGTGGTGCTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHCRALA*VVLSSS
Trigger: GGAGCTGGAGAGCACCACCCAGGCCAAGGCACGGCA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGGCTGGTCTGCTTTGCTaGCCTCAAAGAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQAGLLC*PQRAAV
Trigger: CACGGCAGCTCTTTGAGGCCAGCAAAGCAGACCAGC...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTTTTTGATGTGCTGCTaGACCGCCTGCAAACCGTTG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRFLMCC*TACKPL
Trigger: CAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTTTTTGATGTGCTGCTaGACCGCCTGCAAACCGTTG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLFLMCC*TACKPL
Trigger: CAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSTWRLS*YSQYCC
Trigger: ACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTACCTGGCGGCTGAGCTaGTACAGCCAGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGTWRLS*YSQYCC
Trigger: ACAGCAGTACTGGCTGTACCAGCTCAGCCGCCAGGT...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATGCAGCCACTCCCAATaGCGGTCCCACTTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTCSHSQ*RSHFSD
Trigger: GTCGGAAAAGTGGGACCGCCATTGGGAGTGGCTGCA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGCAGCCACTCCCAATaGCGGTCCCACTTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSCSHSQ*RSHFSD
Trigger: GTCGGAAAAGTGGGACCGCCATTGGGAGTGGCTGCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTGTTGGGCAGGCGACCTaGGGGAAGCTCGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFVGQAT*GKLAWL
Trigger: CAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCAAC...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCCTCCCCTCATGAAGTaGCATTTACAACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRPPLMK*HLQLEG
Trigger: CCCCTCCAGTTGTAAATGCCACTTCATGAGGGGAGG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCAATTTTGATGACTTaGATCTGGAAGCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSILMT*IWKRRM
Trigger: CATCCTGCGCTTCCAGATTCAAGTCATCAAAATTGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGAGTTGGCAAATTTCTaGTTGCTGATGAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRELANF*LLMRPT
Trigger: CGTGGGCCTCATCAGCAATCAGAAATTTGCCAACTC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCTCACCTGGCGGCTaGGCTGGTACAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHRSPGG*AGTAST
Trigger: AGTACTGGCTGTACCAGCTCAGCCGCCAGGTGAGCG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR TCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTGCTCTCGGGCGTCACTaGAGAACTTATGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLALGRH*RTYEAP
Trigger: GGGAGCTTCATAAGTTCTTCAGTGACGCCCGAGAGC...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGCTCTGTTCCGCTTTaGTTTTCTCGATCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLCSVPL*FSRSWS
Trigger: TGACCACGATCGAGAAAATCAAAGCGGAACAGAGCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAACTGTTGTCATTCCATTaGGAAGGGGGCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQLLSFH*EGGCQW
Trigger: CCATTGACAGCCCCCTTCTCAATGGAATGACAACAG...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGCAGTCCATGCTTCTaGAACAGGTCGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSSPCF*NRSSAS
Trigger: GGAGGCAGACGACCTGTTGCAGAAGCATGGACTGCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAATGGAGAGCAGCCATTaGTCCTTCTCGCCGATCCAC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTMESSH*SFSPIH
Trigger: GTGGATCGGCGAGAAGGAGCAATGGCTGCTCTCCAT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTATGGAGAGCAGCCATTaGTCCTTCTCGCCGATCCAC +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLMESSH*SFSPIH
Trigger: GTGGATCGGCGAGAAGGAGCAATGGCTGCTCTCCAT...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCTGGCCGCCACGATaGGAGCATAGTCTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHRWPPR*EHSLPR
Trigger: GCGAGGAAGACTATGCTCGCATCGTGGCGGCCAGCG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCCACCTGCATCTTTTaGTGGCTCAGCTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSATCIF*WLSSMV
Trigger: CACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGCTCCCCGTAGATGTTaGCCTGCCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHAPRRC*PASAGP
Trigger: AGGGCCTGCTGAGGCAGGGCAACATCTACGGGGAGC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGASFCIH*WARNWF
Trigger: AAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCTTTTTGATGTGCTaGTGGACCGCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQFFLMC*WTACKP
Trigger: CGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTTCTTTTTGATGTGCTaGTGGACCGCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRFFLMC*WTACKP
Trigger: CGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGGTTCTTTTTGATGTaGTGCTGGACCGCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAWFFLM*CWTACK
Trigger: TTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCTCTGTTCGTCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQCSVRP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGACGAACAGAGCA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTTCTCGGCAATCCAGTaGTCAAGCTCGCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSFSAIQ*SSSLTW
Trigger: CCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCTGAGAATTTCTCCTaGAGCACCGAGACATGCTCA +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSENFS*STETCS
Trigger: TGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCATCTGGTTCACAGCTaGCAGCCGTTCCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHHLVHS*QPFPPC
Trigger: GCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGGAGCTGCAGGTCATaGTCAAAGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRSCRS*SKALRV
Trigger: GACCCTGAGAGCCTTTGAGCATGACCTGCAGCTCCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGGGACACGAGGAGCTaGAGGTCATGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSWDTRS*RSCSKA
Trigger: AGCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTQSGWR*HPSRRA
Trigger: TGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACAGGCTGCAGCCGCTTTaGGGAAGGCCTCATGTCGCC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHRLQPL*GRPHVA
Trigger: GGCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTGTTCGCTGGACTCCTaGCGCTCCAAGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHCSLDS*RSKRRS
Trigger: TGAGCGGCGCTTGGAGCGGCAGGAGTCCAGCGAACA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCACCACTTCTTGGGGTaGAGGAGAAGTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSHHFLG*RRSPLL
Trigger: AAGGAGGGGACTTCTCCTGCACCCCAAGAAGTGGTG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACTCATAGCCACCTTGTaGTCAAACCTCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCILIATL*SNLCAS
Trigger: ACTGGCACAGAGGTTTGACCACAAGGTGGCTATGAG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGGGAGACCAGACGCTaGTTCTCATTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSWETRR*FSFSQL
Trigger: GAGCTGGCTGAATGAGAACCAGCGTCTGGTCTCCCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGATGTACACCATCTCCTaGAAGACCTTCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRMYTIS*KTFCRA
Trigger: TGCCCTGCAGAAGGTCTTCCAGGAGATGGTGTACAT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACAGCACCACGAGCGCCTaGCGTAGATCCCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSTTSA*RRSRRK
Trigger: CTTCCTGCGGGATCTACGCCAGGCGCTCGTGGTGCT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACGTAACTGGTTTTCTTaGTTCTTCTCCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRNWFS*FFSSSR
Trigger: CCGGCTGCTGGAGAAGAACCAAGAAAACCAGTTACG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTTTGCATCCATTGCTaGGCCCGTAACTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVFCIHC*ARNWFS
Trigger: AGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGATCAGCATCTTCTCATaGATCCAGCCATCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRISIFS*IQPSSS
Trigger: CGAGCTGGATGGCTGGATCCATGAGAAGATGCTGAT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTTTTTGATGTGCTGCTaGACCGCCTGCAAACCGTTG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRFLMCC*TACKPL
Trigger: CAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTTTTTGATGTGCTGCTaGACCGCCTGCAAACCGTTG +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNFLMCC*TACKPL
Trigger: CAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCATACCTGTCTCGCTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPYLSR*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TGGTTCTTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCAGCTCATCCACCATCTaGTTCACAGCTGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: WFFLMCCWTACKPLPRSVSSSTI*FTAASR
Trigger: ACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCT...GACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTTTGTCCAGCTGTGCCTaGATCTCATCAGCCATGGCA +
Preference number: 4 (lower is better)
Translates to: IFSIVVRRRRELNLSSQALSSCA*ISSAMA
Trigger: TGCCATGGCTGATGAGATCCAGGCACAGCTGGACAA...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCCGCCAGCTGGTGGTaGAATTCTGGATGTTTACCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPASWW*NSGCLP
Trigger: AGGTAAACATCCAGAATTTCACCACCAGCTGGCGGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTTCAGCTCCATGGTGGTaGGAAAGTCACGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVSAPWW*ESHGAV
Trigger: AACAGCACCGTGACTTTCTCACCACCATGGAGCTGA...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGCCACTCCTTATTCTaGGCCAGCTCGGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSHSLF*ASSAMN
Trigger: ATTCATGGCCGAGCTGGCTCAGAATAAGGAGTGGCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGCAGCCTCCTCGGATTaGTCGACTGACTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHAASSD*STDSCR
Trigger: GCGGCAAGAGTCAGTCGATCAATCCGAGGAGGCTGC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR TCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACAGGCAGCATTGGAAGTaGGGTAAAGGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHRQHWK*GKGGEG
Trigger: CCCCTCCCCGCCTTTACCTCACTTCCAATGCTGCCT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGTAGGCCGCAATGTCTaGCTCGATCGCTTCGTGTTT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSVGRNV*LDRFVF
Trigger: AAACACGAAGCGATCGAGGCAGACATTGCGGCCTAC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGTGAGAAAGTCACGGTaGTGTTTCAAGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTVRKSR*CFKASS
Trigger: GGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCAC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGTGAGAAAGTCACGGTaGTGTTTCAAGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSVRKSR*CFKASS
Trigger: GGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCAC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTGCTCCCCGTAGATGTTaGCCTGCCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFAPRRC*PASAGP
Trigger: AGGGCCTGCTGAGGCAGGGCAACATCTACGGGGAGC...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGGAGCCATCTCTTATaGAGCTTGTGGTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRSHLL*SLWLSS
Trigger: GGAGGACAACCACAAGCTGCATAAGAGATGGCTCCG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGCGGAGCCATCTCTTATaGAGCTTGTGGTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMRSHLL*SLWLSS
Trigger: GGAGGACAACCACAAGCTGCATAAGAGATGGCTCCG...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTGCTGCTGGACCGCCTaGAAACCGTTGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHCCWTA*KPLPRS
Trigger: AGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGGTTCTTTTTGATGTaGTGCTGGACCGCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQWFFLM*CWTACK
Trigger: TTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATGGTTCTTTTTGATGTaGTGCTGGACCGCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIWFFLM*CWTACK
Trigger: TTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCTGAGAATTTCTCCTaGAGCACCGAGACATGCTCA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSENFS*STETCS
Trigger: TGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACAGCTCTTTCCAACCCTaGAGCACCTCCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSSFQP*STSCSR
Trigger: CCGGGAGCAGGAGGTGCTGCAGGGTTGGAAAGAGCT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTCAGCTTGTCCAGCTGTaGCTGGATCTCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLQLVQL*LDLISH
Trigger: ATGGCTGATGAGATCCAGGCACAGCTGGACAAGCTG...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGGAGCAAAAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTGAKTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTTTTGCTCC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCTCCTCCTCATCTTTTaGCTGGAGCAAAAACTCACT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLLLIF*LEQKLT
Trigger: AGTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGAAAAAGTGTCTTTGTaGCCACAGTGCGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTREKVSL*PQCGKE
Trigger: CTCTTTTCCGCACTGTGGGCACAAAGACACTTTTTC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGAAAAAGTGTCTTTGTaGCCACAGTGCGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAEKVSL*PQCGKE
Trigger: CTCTTTTCCGCACTGTGGGCACAAAGACACTTTTTC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGTTCTTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCGGTTCCCAAGGAGGGTaGAGAAGAGCAGGATGGATA +
Preference number: 4 (lower is better)
Translates to: WFFLMCCWTACKPLPRSVGSQGG*RRAGWI
Trigger: TATCCATCCTGCTCTTCTGCACCCTCCTTGGGAACC...GACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCCACCTCCAATACCTaGTCCAAGACCTTCCCGATA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPTSNT*SKTFPI
Trigger: TATCGGGAAGGTCTTGGACCAGGTATTGGAGGTGGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATACCCAAAGTTGTCCTaGGAGACCAGACGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTYPKLS*ETRRWF
Trigger: GAACCAGCGTCTGGTCTCCCAGGACAACTTTGGGTA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGGCTGTTCATCTCTTaGTCCAGGCTCTCGAATCGG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRLFIS*SRLSNR
Trigger: CCGATTCGAGAGCCTGGACCAAGAGATGAACAGCCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTAGGCTGTTCATCTCTTaGTCCAGGCTCTCGAATCGG +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVRLFIS*SRLSNR
Trigger: CCGATTCGAGAGCCTGGACCAAGAGATGAACAGCCT...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGGCTGTTCATCTCTTaGTCCAGGCTCTCGAATCGG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRLFIS*SRLSNR
Trigger: CCGATTCGAGAGCCTGGACCAAGAGATGAACAGCCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTGCTGCAGCTCAAGTTaGTCATGTAGCTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGACCSSS*SCSFCI
Trigger: GATGCAAAAGCTACATGACCAACTTGAGCTGCAGCA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCCATACCTGTCTCGCTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: PPFRCPPCHASSVLELGAPYLSR*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCCATACCTGTCTCGCTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLPYLSR*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTTGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCCTCCCCTCATGAAGTaGCATTTACAACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSPPLMK*HLQLEG
Trigger: CCCCTCCAGTTGTAAATGCCACTTCATGAGGGGAGG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTTGCTGGGCCCGTAACTaGTTTTCTTGGTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGCWARN*FSWFLC
Trigger: GCACAGGAACCAAGAAAACCAGTTACGGGCCCAGCA...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGAGTTGGCAAATTTCTaGTTGCTGATGAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTELANF*LLMRPT
Trigger: CGTGGGCCTCATCAGCAATCAGAAATTTGCCAACTC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGTGTTTCTTCATGGCTaGCTCCACTGCGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHVFLHG*LHCGQL
Trigger: GAGCTGCCCGCAGTGGAGGCAGCCATGAAGAAACAC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACAGCGAACAACTGCTCTaGTTCCACCACGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSEQLL*FHHAHL
Trigger: CAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCGCTCATTTCCTCTTTaGGCTGTTCCACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRSFPL*AVPLAP
Trigger: TGGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAAGCCGAGCAGTTTATaGCAGCCAAGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSKPSSL*QPSSRC
Trigger: ACACCTCGAACTTGGCTGGCATAAACTGCTCGGCTT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAAGCCGAGCAGTTTATaGCAGCCAAGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTKPSSL*QPSSRC
Trigger: ACACCTCGAACTTGGCTGGCATAAACTGCTCGGCTT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATTCTTTTTGATGTGCTaGTGGACCGCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTFFLMC*WTACKP
Trigger: CGGTTTGCAGGCGGTCCAGCAGCACATCAAAAAGAA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATGCTCTGTTCGTCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTCSVRP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGACGAACAGAGCA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCATCTGAGAATTTCTCCTaGAGCACCGAGACATGCTCA +
Preference number: 4 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSSENFS*STETCS
Trigger: TGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGA...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGAAAAAGTGTCTTTGTaGCCACAGTGCGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIEKVSL*PQCGKE
Trigger: CTCTTTTCCGCACTGTGGGCACAAAGACACTTTTTC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGAAAAAGTGTCTTTGTaGCCACAGTGCGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGREKVSL*PQCGKE
Trigger: CTCTTTTCCGCACTGTGGGCACAAAGACACTTTTTC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACGTAACTGGTTTTCTTaGTTCTTCTCCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRNWFS*FFSSSR
Trigger: CCGGCTGCTGGAGAAGAACCAAGAAAACCAGTTACG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGCTGGGCCCGTAACTaGTTTTCTTGGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSCWARN*FSWFFS
Trigger: GGAGAAGAACCAAGAAAACCAGTTACGGGCCCAGCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATTTTGCATCCATTGCTaGGCCCGTAACTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIFCIHC*ARNWFS
Trigger: AGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTCCTGCATCAGTTGCTaGCCCTCCCGCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSCISC*PSRSIF
Trigger: GAAGATCGAGCGGGAGGGCCAGCAACTGATGCAGGA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACACATGCTCAAAGTCCTaGCCGAGCTCGGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHTCSKS*PSSGEP
Trigger: TGGCTCACCCGAGCTCGGCCAGGACTTTGAGCATGT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCATACCTGTCTCGCTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNPYLSR*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACCATACCTGTCTCGCTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIPYLSR*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGTAATAATAGGCAACTaGGAAGGACAGCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNVIIGN*EGQRTE
Trigger: TTCTGTCCGCTGTCCTTCCCAGTTGCCTATTATTAC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR TCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTCACTGAAGAACTTATaGAGCTCCCGAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSLKNL*SSREAA
Trigger: GGCCGCCTCTCGGGAGCTTCATAAGTTCTTCAGTGA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR TCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCCATGGCACTTTTGTTaGGCAGCAGAGATCGCCCCA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHPWHFC*AAEIAP
Trigger: TGGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR TCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATGCTCTGTTCCGCTTTaGTTTTCTCGATCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTCSVPL*FSRSWS
Trigger: TGACCACGATCGAGAAAATCAAAGCGGAACAGAGCA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGCTCTGTTCCGCTTTaGTTTTCTCGATCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSCSVPL*FSRSWS
Trigger: TGACCACGATCGAGAAAATCAAAGCGGAACAGAGCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSFCIH*WARNWF
Trigger: AAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATGGTTCTTTTTGATGTaGTGCTGGACCGCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTWFFLM*CWTACK
Trigger: TTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp TATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTTGGTTCTTTTTGATGTaGTGCTGGACCGCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YGHTRSAHPPSGSQLPAVWFFLM*CWTACK
Trigger: TTTGCAGGCGGTCCAGCAGCACATCAAAAAGAACCA...AACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGCGACAGCTGCGCGATaGTTTCCTCGTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHATAAR*FPRSSP
Trigger: TGGAGAACTACGAGGAAAGCATCGCGCAGCTGTCGC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCTGAGAATTTCTCCTaGAGCACCGAGACATGCTCA +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSENFS*STETCS
Trigger: TGAGCATGTCTCGGTGCTGCAGGAGAAATTCTCAGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHQSGWR*HPSRRA
Trigger: TGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGATCAAGCTCAGTTATTaGATAAAAATAAGGGACCCC +
Preference number: 4 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVIKLSY*IKIRDP
Trigger: GGGGTCCCTTATTTTTATGCAATAACTGAGCTTGAT...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTCGGCCATGAATGCCTaGTGCCGGAGCCATCTCTTA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSAMNA*CRSHLL
Trigger: TAAGAGATGGCTCCGGCACCAGGCATTCATGGCCGA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTCCATACCTGTCTCGCTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: IFSIVVRRRRELNLSSQAPYLSR*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGCGAGACAGGTATGG...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTTTCTCGGCAATCCAGTaGTCAAGCTCGCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFFSAIQ*SSSLTW
Trigger: CCAGGTGAGCGAGCTTGAGCACTGGATTGCCGAGAA...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGGAGCAAAAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHGAKTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTTTTGCTCC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACTCCTCCTCATCTTTTaGCTGGAGCAAAAACTCACT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTLLLIF*LEQKLT
Trigger: AGTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTCTTTGTGCCCACAGTaGGGAAAAGAGGGGAGACGA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSLCPQ*GKEGRR
Trigger: TCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGATCAAGCTCAGTTATTaGATAAAAATAAGGGACCCC +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLIKLSY*IKIRDP
Trigger: GGGGTCCCTTATTTTTATGCAATAACTGAGCTTGAT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCCCACCTCCAATACCTaGTCCAAGACCTTCCCGATA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHPTSNT*SKTFPI
Trigger: TATCGGGAAGGTCTTGGACCAGGTATTGGAGGTGGG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATTTTGCATCCATTGCTaGGCCCGTAACTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTFCIHC*ARNWFS
Trigger: AGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR TCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCAATTTTGATGACTTaGATCTGGAAGCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSILMT*IWKRRM
Trigger: CATCCTGCGCTTCCAGATTCAAGTCATCAAAATTGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTGCTCTGTTCGTCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHCSVRP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGACGAACAGAGCA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGAGGAGATCGACGTTTTaGAAAAATAAACTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLRRSTF*KNKLSQ
Trigger: CTGACTTAGTTTATTTTTGCAAAACGTCGATCTCCT...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTTTTTCTTGGTTCCTGTaGCTGGCCTCTAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFFSWFL*LASSCW
Trigger: CCAGCAGCTAGAGGCCAGGCACAGGAACCAAGAAAA...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
50% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCTCATAGCCACCTTGTaGTCAAACCTCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHLIATL*SNLCAS
Trigger: ACTGGCACAGAGGTTTGACCACAAGGTGGCTATGAG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTCGCTCATTTCCTCTTTaGGCTGTTCCACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AQVGHVAFASIAGPVTGFRSFPL*AVPLAP
Trigger: TGGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCG...AAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR GCA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGGAGATCGACGTTTTaGAAAAATAAACTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRRSTF*KNKLSQ
Trigger: CTGACTTAGTTTATTTTTGCAAAACGTCGATCTCCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCTCCTCCTCATCTTTTaGCTGGAGCAAAAACTCACT +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHLLLIF*LEQKLT
Trigger: AGTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCATCAAGCTCAGTTATTaGATAAAAATAAGGGACCCC +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSIKLSY*IKIRDP
Trigger: GGGGTCCCTTATTTTTATGCAATAACTGAGCTTGAT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CCA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTGCTGCAGCTCAAGTTaGTCATGTAGCTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHCCSSS*SCSFCI
Trigger: GATGCAAAAGCTACATGACCAACTTGAGCTGCAGCA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR GCA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGGAGATCGACGTTTTaGAAAAATAAACTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRRSTF*KNKLSQ
Trigger: CTGACTTAGTTTATTTTTGCAAAACGTCGATCTCCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR GCA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGGAGATCGACGTTTTaGAAAAATAAACTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRRSTF*KNKLSQ
Trigger: CTGACTTAGTTTATTTTTGCAAAACGTCGATCTCCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS GCA 90 bp GCTGGACAGGTCATGCGCGCCGCCCGCTGTTCCCGCTGCGCCCGCTaGGCCCGCCGCACCGCCGCCGCCCGCAGCCTCCAGGAGACGCTC +
Preference number: 5 (lower is better)
Translates to: AGQVMRAARCSRCAR*ARRTAAARSLQETL
Trigger: GAGCGTCTCCTGGAGGCTGCGGGCGGCGGCGGTGCGGCGGGCGCAGCGGGCGCAGCGGGAACAGCGGGCGGCGCGCATGACCTGTCCAGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp GAAGGTGAGGCCTGGGCCCGCGGCCGCCAGCGTCGCTGTCTCCGCTaGTCGCCGCGACCGACCGCCCTCCCTGTCGGCGTCCGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: EGEAWARGRQRRCLR*SPRPTALPVGVRCP
Trigger: CGGGCAGCGGACGCCGACAGGGAGGGCGGTCGGTCGCGGCGAGCAGCGGAGACAGCGACGCTGGCGGCCGCGGGCCCAGGCCTCACCTTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000598249.6
CDS GCA 90 bp GGCGCTCGCCGCGCGCTCCGCCAGGCCTACCAGGTGCACGGTGTCTaGTCCCGGGCCGACGGCACCGCCGGCCGCAACCAGCTCCTCGCC +
Preference number: 5 (lower is better)
Translates to: GARRALRQAYQVHGV*SRADGTAGRNQLLA
Trigger: GGCGAGGAGCTGGTTGCGGCCGGCGGTGCCGTCGGCCCGGGAGCAGACACCGTGCACCTGGTAGGCCTGGCGGAGCGCGCGGCGAGCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp GAGTGTCGCCAGCTGGCGCCGCAGGCCGCTCACGGGCCCGCGATGTaGCTCCACCTCCCCGGTGAGCGCGCGGTGCTGGCGCGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: ECRQLAPQAAHGPAM*LHLPGERAVLARQA
Trigger: CGCCTGGCGCGCCAGCACCGCGCGCTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTGAGCGGCCTGCGGCGCCAGCTGGCGACACTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS TCA 90 bp GCCGCAGGCCGCTCACGGGCCCGCGATGTGCCTCCACCTCCCCGGTaGGCGCGCGGTGCTGGCGCGCCAGGCGGCGGCTGGAAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: AAGRSRARDVPPPPR*ARGAGAPGGGWKLR
Trigger: ACGAAGCTTCCAGCCGCCGCCTGGCGCGCCAGCACCGCGCGCTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTGAGCGGCCTGCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp AGCCCGTCGAGGTCAGCGCCGAACTGGTGCAGCGCCCGCGCCTCCTaGAGCCGCCGCTCTCGCCGCGCCGCCGCCTCTTCCAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SPSRSAPNWCSARAS*SRRSRRAAASSSLC
Trigger: GCAGAGGCTGGAAGAGGCGGCGGCGCGGCGAGAGCGGCGGCTGCAGGAGGCGCGGGCGCTGCACCAGTTCGGCGCTGACCTCGACGGGCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp ACGGCACCGCCGGCCGCAACCAGCTCCTCGCCACACCGCAGGGCCTaGTGCAGCAACGCTCGCCGCCCGCCCAGCTCGCCCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: TAPPAATSSSPHRRA*CSNARRPPSSPCRI
Trigger: GATCCTGCAGGGCGAGCTGGGCGGGCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTGTGGCGAGGAGCTGGTTGCGGCCGGCGGTGCCGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp CTCACGGGCCCGCGATGTGCCTCCACCTCCCCGGTGAGCGCGCGGTaGTGGCGCGCCAGGCGGCGGCTGGAAGCTTCGTCGTGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LTGPRCASTSPVSAR*WRARRRLEASSWPK
Trigger: CTTCGGCCACGACGAAGCTTCCAGCCGCCGCCTGGCGCGCCAGCACCGCGCGCTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp CACAGGCTCCGCGAAGCCTCCAGCTCCGCGCGTCGCCGCGCTGCCTaGTCCTGCAGCTCCGCCAGGCAGCCGTGCACGTGGTTCACGCGG +
Preference number: 5 (lower is better)
Translates to: HRLREASSSARRRAA*SCSSARQPCTWFTR
Trigger: CCGCGTGAACCACGTGCACGGCTGCCTGGCGGAGCTGCAGGAGCAGGCAGCGCGGCGACGCGCGGAGCTGGAGGCTTCGCGGAGCCTGTG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp AGGATCTTGTGCTGGGCCAGGAGGCGCGCTGTGCTGGACAGGTCATaGGCGCCGCCCGCTGTTCCCGCTGCGCCCGCTGCGCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: RILCWARRRAVLDRS*APPAVPAAPAAPAA
Trigger: TGCGGCGGGCGCAGCGGGCGCAGCGGGAACAGCGGGCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGGCCCAGCACAAGATCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp AGGGCTGCCTCCTCCAGAAGGGCCGCCTGGCGCGGCTCCAGCGCCTaGAGAGCGGCCTCTAGGCCGCTAAGACGCCACTGCAGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: RAASSRRAAWRGSSA*RAASRPLRRHCRAP
Trigger: CGGCGCCCTGCAGTGGCGTCTTAGCGGCCTAGAGGCCGCTCTGCAGGCGCTGGAGCCGCGCCAGGCGGCCCTTCTGGAGGAGGCAGCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp TCCAGCCATCCAGCTGAAGCGGCAGTGGCGTTGGCGGGGCGTCCCTaGAGCGGGCGGGCGGGTGCTCGCCCCTCAACTGCGACGGCAGCG +
Preference number: 5 (lower is better)
Translates to: SSHPAEAAVALAGRP*SGRAGARPSTATAA
Trigger: CGCTGCCGTCGCAGTTGAGGGGCGAGCACCCGCCCGCCCGCTGCAGGGACGCCCCGCCAACGCCACTGCCGCTTCAGCTGGATGGCTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS GCA 90 bp CCAGCTCGCCCTGCAGGATCTTGTGCTGGGCCAGGAGGCGCGCTGTaGTGGACAGGTCATGCGCGCCGCCCGCTGTTCCCGCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: PARPAGSCAGPGGAL*WTGHARRPLFPLRP
Trigger: CGGGCGCAGCGGGAACAGCGGGCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCAGGGCGAGCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp CGCAGGGCCTGCTGCAGCAACGCTCGCCGCCCGCCCAGCTCGCCCTaGAGGATCTTGTGCTGGGCCAGGAGGCGCGCTGTGCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: RRACCSNARRPPSSP*RILCWARRRAVLDR
Trigger: CCTGTCCAGCACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCAGGGCGAGCTGGGCGGGCGGCGAGCGTTGCTGCAGCAGGCCCTGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp CAGGCGGCGGCTGGAAGCTTCGTCGTGGCCGAAGTCACCGGCGGCTaGCAGGCGGTAAGCGTCGCGAAGCCAGTCCAGCAGCCCGTCGAG +
Preference number: 5 (lower is better)
Translates to: QAAAGSFVVAEVTGG*QAVSVAKPVQQPVE
Trigger: CTCGACGGGCTGCTGGACTGGCTTCGCGACGCTTACCGCCTGGCAGCCGCCGGTGACTTCGGCCACGACGAAGCTTCCAGCCGCCGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TCCGCGCGATCAGCTGACTCCTGGCGCTCCGGTCGTGGCCGCACCTGCTCCGCCGACACGTCCCTGGGCTaGTCGGCTGCCCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: SARSADSWRSGRGRTCSADTSLG*SAAPIW
Trigger: CCAGATTGGGGCAGCCGACAAGCCCAGGGACGTGTC...GGCGGAGCAGGTGCGGCCACGACCGGAGCGCCAGGAGTCAGCTGATCGCGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGCAGGCTGCAGCCGCTTaGCGGAAGGCCTCATGTCGC +
Preference number: 5 (lower is better)
Translates to: WAGDLGEARVAEAATAQQQAAAA*RKASCR
Trigger: GCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTG...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCTGGAGGCGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCA...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS CCA 90 bp AGTCGTGTCCGCCGGGCACCCACAAGCCCAGTTAGCAGGGCCCACTaGCGCAGGACGCTGTCACGCTGGGCTGCCACCCGCCGGATATCG +
Preference number: 5 (lower is better)
Translates to: SRVRRAPTSPVSRAH*RRTLSRWAATRRIS
Trigger: CGATATCCGGCGGGTGGCAGCCCAGCGTGACAGCGTCCTGCGCCAGTGGGCCCTGCTAACTGGGCTTGTGGGTGCCCGGCGGACACGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACGCAGGGCAGCGGCATaGAGAGCCTCCACCCGCTCG +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRRAAA*RASTRS
Trigger: CGAGCGGGTGGAGGCTCTCAATGCCGCTGCCCTGCG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSPTSS*LAGSSG
Trigger: GCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTTCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: ERHVQAVHLRLPPADLLASPTSS*LAGSSG
Trigger: GCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGA...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGGCAGCTCAAGCCCGTaGGGCAGGCGACCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRGSSSP*GRRPGG
Trigger: TCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGGCAGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: AGDLGEARVAEAATAQQADRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...TGCCTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS TCA 90 bp GCAGCTCCGCCAGGCAGCCGTGCACGTGGTTCACGCGGTTGCAGATaGCCTGCGGGTCGCAGGGCTGGTAGCCCTGCAGCTGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: AAPPGSRARGSRGCR*PAGRRAGSPAAGRS
Trigger: GCTTCTCCCAGCTGCAGGGCTACCAGCCCTGCGACCCGCAGGTCATCTGCAACCGCGTGAACCACGTGCACGGCTGCCTGGCGGAGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 90 bp CTGGGCTGCCACCCGCCGGATATCGTAGTAGCCTTCGGCTGCCAATaGCTGGGCCAGCTCCGCCACACCCTGCACCCGCTCCTCGTAGGC +
Preference number: 5 (lower is better)
Translates to: LGCHPPDIVVAFGCQ*LGQLRHTLHPLLVG
Trigger: GCCTACGAGGAGCGGGTGCAGGGTGTGGCGGAGCTGGCCCAGGCATTGGCAGCCGAAGGCTACTACGATATCCGGCGGGTGGCAGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 90 bp GTCACGCTGGGCTGCCACCCGCCGGATATCGTAGTAGCCTTCGGCTaGCAATGCCTGGGCCAGCTCCGCCACACCCTGCACCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VTLGCHPPDIVVAFG*QCLGQLRHTLHPLL
Trigger: GAGGAGCGGGTGCAGGGTGTGGCGGAGCTGGCCCAGGCATTGGCAGCCGAAGGCTACTACGATATCCGGCGGGTGGCAGCCCAGCGTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 90 bp GCGCCTCAGCGCCGCCACTTCGGTCACCTCAGCGAACAACTGCTCTaGTTCCACCACGCGCACCTGCAGCGCCACCACCAGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: APQRRHFGHLSEQLL*FHHAHLQRHHQWPC
Trigger: GCAGGGCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGTGACCGAAGTGGCGGCGCTGAGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GAGGCCGCCAGTTCGGGCTTCTCCTGCATCAGTTGCTGGCCCTCCCGCTCGATCGGCAGCTCAAGCCCGTaGGGCAGGCGACCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: EAASSGFSCISCWPSRSIGSSSP*GRRPGG
Trigger: TCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCC...GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS TCA 90 bp CCACGATGCGAGCATAGTCTTCCTCGCGCTGGTCCACCTCCTCCTTaGGCGCAGCGTGGCGCGCCAGCAGCGCGTCCGCCTCTTCTAGGC +
Preference number: 5 (lower is better)
Translates to: PRCEHSLPRAGPPPP*AQRGAPAARPPLLG
Trigger: GCCTAGAAGAGGCGGACGCGCTGCTGGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACCAGCGCGAGGAAGACTATGCTCGCATCGTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp TCGGTCACCTCAGCGAACAACTGCTCTGCTTCCACCACGCGCACCTaGAGCGCCACCACCAGTGGCCCTGCGCCACTGGCACCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: SVTSANNCSASTTRT*SATTSGPAPLAPPS
Trigger: ACTCGGGGGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGTGACCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp CACTGGCGCCTCAGCGCCGCCACTTCGGTCACCTCAGCGAACAACTaGTCTGCTTCCACCACGCGCACCTGCAGCGCCACCACCAGTGGC +
Preference number: 5 (lower is better)
Translates to: HWRLSAATSVTSANN*SASTTRTCSATTSG
Trigger: GCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGTGACCGAAGTGGCGGCGCTGAGGCGCCAGTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCTCCTGAACCCATGCCAGCTCGTCGTCCAGGTCGTGCGCCACCTGGTGCAACTTGGTCCACCTCCTCCTaGAGCGCAGCGTGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: APEPMPARRPGRAPPGATWSTSS*SAAWRA
Trigger: GGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACCA...AGTTGCACCAGGTGGCGCACGACCTGGACGACGAGCTGGCATGGGTTCAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGCGCACCAGGCGCTCGCCCACCGCGTTCTGCCGCTCACCCACCAGCTCCTTGCGGCCACCTGCATCTTTaGCTGGCTCAGCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: GAPGARPPRSAAHPPAPCGHLHL*LAQLHG
Trigger: ACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCC...GCAAGGAGCTGGTGGGTGAGCGGCAGAACGCGGTGGGCGAGCGCCTGGTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSPTSS*LAGSSG
Trigger: GCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGCAGGGGCGCCGCCTaGGCCGCCAGTTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGASRGAA*AASSVG
Trigger: CCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGCT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCAGGGTGGCCTTCCCCTaGACCAGGTCTCCTCTGATG +
Preference number: 5 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTRVAFP*TRSPLM
Trigger: CATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCT...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAACGTGGTTCACGCGGTaGCAGATGACCTGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRTWFTR*QMTCGS
Trigger: CGACCCGCAGGTCATCTGCAACCGCGTGAACCACGT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCCAGGAGACGCTCCTaGTCGCGCGCCCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSRRRS*SRAQLS
Trigger: CGAGAGCTGGGCGCGCGACAAGGAGCGTCTCCTGGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCCTCTTCTAGGCTGTaGGGCAGGGGCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLASSRL*GRGPSL
Trigger: CAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TTGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGCAGGCGCACCTCCAGGGTCCACGTCTaGCAGCTGGCTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: LEASSKRRRSCNGSSRRTSRVHV*QLALHV
Trigger: CACATGGAGAGCCAGCTGCAAGACGTGGACCCTGGA...GGTGCGCCTGCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGAGCAGGTCGCGGACTaGGCTGTGGAAGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLEQVAD*AVEAQG
Trigger: GCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCTC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTGAGCAGGTCGCGGACTaGGCTGTGGAAGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPEQVAD*AVEAQG
Trigger: GCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCTC...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGTGTCCGCTCGGGCAGCTCAAGCCCGTTGGGCAGGCGACCTGGGGGAAGCTCGGCCATGGCACTTTTGTaGAGCAGCAGAGATCGCCCC +
Preference number: 5 (lower is better)
Translates to: GVRSGSSSPLGRRPGGSSAMALL*SSRDRP
Trigger: GGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGGC...CGAGCTTCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCCCGAGCGGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGCAGGGGCGCCGCCTaGGCCGCCAGTTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISRGAA*AASSVG
Trigger: CCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCGCGTCGAGCTCGCGCTaGCGCAGTAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLASSSR*RSRKPS
Trigger: CGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACGC...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCGTCGAGCTCGCGCTaGCGCAGTAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSASSSR*RSRKPS
Trigger: CGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTGCGTCGAGCTCGCGCTaGCGCAGTAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPASSSR*RSRKPS
Trigger: CGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACGC...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS GCA 90 bp CGCTCGCTCTGGGCGGCAATGTCTCCCTCCAGCAGTCCATGCTTCTaGAACAGGTCGTCTGCCTCCACCAGGTGCTGCCCACACTCCCGG +
Preference number: 5 (lower is better)
Translates to: RSLWAAMSPSSSPCF*NRSSASTRCCPHSR
Trigger: CCGGGAGTGTGGGCAGCACCTGGTGGAGGCAGACGACCTGTTGCAGAAGCATGGACTGCTGGAGGGAGACATTGCCGCCCAGAGCGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS CCA 90 bp CGCTTCTCACGCACCTGGGCGCGCACCTCGGCCACCTCCAGCACGTaGTTCTCCACCAGCAGCACCGCGCTCATTTCCTCTTTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: RFSRTWARTSATSST*FSTSSTALISSLRC
Trigger: ACAGCGCAAAGAGGAAATGAGCGCGGTGCTGCTGGTGGAGAACCACGTGCTGGAGGTGGCCGAGGTGCGCGCCCAGGTGCGTGAGAAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCCAGGAGACGCTCCTaGTCGCGCGCCCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSRRRS*SRAQLS
Trigger: CGAGAGCTGGGCGCGCGACAAGGAGCGTCTCCTGGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCACCCGGCGCTCCTCACCCAGCTCCTTGAGCGCCACGTACAGGCGGTCCACCCAGGCTGTTCATCTCTaGGTCCAGGCTCTCGAATCG +
Preference number: 5 (lower is better)
Translates to: ATRRSSPSSLSATYRRSTQAVHL*VQALES
Trigger: CGATTCGAGAGCCTGGACCAAGAGATGAACAGCCTG...GGTGGACCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGAGCGCCGGGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTGGTCCACCTCCTCCTaGAGCGCAGCGTGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLWSTSS*SAAWRA
Trigger: GGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACCA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GAGCGCCACGTACAGGCGGTCCACCTGAGACTGCCGCCGGCTGATCTGCTCGCTCTTCTCCTGCATCAGTaGCTGGCCCTCCCGCTCGAT +
Preference number: 5 (lower is better)
Translates to: ERHVQAVHLRLPPADLLALLLHQ*LALPLD
Trigger: ATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAG...AGCGAGCAGATCAGCCGGCGGCAGTCTCAGGTGGACCGCCTGTACGTGGCGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp TGGGCAGGCGACCTGGGGGAAGCTCGCGTGGCTGAGGCAGCGACGGCCCAGCAGTGTTCGTCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: WAGDLGEARVAEAATAQQCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGACGAACA...CTGCTGGGCCGTCGCTGCCTCAGCCACGCGAGCTTCCCCCAGGTCGCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCAAGCAGGGGCGCCGCCTaGGCCGCCAGTTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSSRGAA*AASSVG
Trigger: CCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGCT...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGGAGGCGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATCTCCCCACCACTTCTaGGGGTGCAGGAGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSPHHF*GCRRSP
Trigger: GGGACTTCTCCTGCACCCCAAGAAGTGGTGGGGAGA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS GCA 90 bp TCCACCCGCTCGCTCTGGGCGGCAATGTCTCCCTCCAGCAGTCCATaGTTCTGCAACAGGTCGTCTGCCTCCACCAGGTGCTGCCCACAC +
Preference number: 5 (lower is better)
Translates to: STRSLWAAMSPSSSP*FCNRSSASTRCCPH
Trigger: GTGTGGGCAGCACCTGGTGGAGGCAGACGACCTGTTGCAGAAGCATGGACTGCTGGAGGGAGACATTGCCGCCCAGAGCGAGCGGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 90 bp TGGACCAGCGCCTCCCTGCGCGCCTCCCACAAGCCGAGCAGTTTATaGCAGCCAAGTTCGAGGTGTGGCAGCCACTCGTCTAGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: WTSASLRASHKPSSL*QPSSRCGSHSSSAR
Trigger: CCTGGCACTAGACGAGTGGCTGCCACACCTCGAACTTGGCTGGCATAAACTGCTCGGCTTGTGGGAGGCGCGCAGGGAGGCGCTGGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp CCCGCAGGAAGAGCTGGTAGATGTGCGCCTGGACCAGCGCCTCCCTaGGCGCCTCCCACAAGCCGAGCAGTTTATGCCAGCCAAGTTCGA +
Preference number: 5 (lower is better)
Translates to: PAGRAGRCAPGPAPP*APPTSRAVYASQVR
Trigger: TCGAACTTGGCTGGCATAAACTGCTCGGCTTGTGGGAGGCGCGCAGGGAGGCGCTGGTCCAGGCGCACATCTACCAGCTCTTCCTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp ATGAGGGGCACCTGGGCTTGTCGGCTGCCCCAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCAGGTCGCGGACTTGGCTGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: MRGTWACRLPQSGWR*HPSRRAGRGLGCGS
Trigger: GCTTCCACAGCCAAGTCCGCGACCTGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGGTGCCCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392023.1
ENST00000595535.5
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGGCAGGCCCTCCATGTaGTCCACTTCCCCTGGTACC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSGRPSM*STSPGT
Trigger: GGTACCAGGGGAAGTGGACAACATGGAGGGCCTGCC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCGCAGGGCAGCGGCATaGAGAGCCTCCACCCGCTCG +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRRRAAA*RASTRS
Trigger: CGAGCGGGTGGAGGCTCTCAATGCCGCTGCCCTGCG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCAGGAGACGCTCCTaGTCGCGCGCCCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSRRRS*SRAQLS
Trigger: CGAGAGCTGGGCGCGCGACAAGGAGCGTCTCCTGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCCTCTTCTAGGCTGTaGGGCAGGGGCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRASSRL*GRGPSL
Trigger: CAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAGGCCACCTGCATCTTTaGCTGGCTCAGCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRGHLHL*LAQLHG
Trigger: ACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCC...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAACCAGCTGGTCTGCTTaGCTGGCCTCAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRTSWSA*LASKSC
Trigger: GCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSPTSS*LAGSSG
Trigger: GCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSPTSS*LAGSSG
Trigger: GCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACCGCC +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRRPWFF*MCCWTA
Trigger: GGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCCTCACCCAGCTCCTaGAGCGCCACGTACAGGCGG +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSSPSS*SATYRR
Trigger: CCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGAGCAGGTCGCGGACTaGGCTGTGGAAGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGAEQVAD*AVEAQG
Trigger: GCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCTC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGAGCAGGTCGCGGACTaGGCTGTGGAAGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTREQVAD*AVEAQG
Trigger: GCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCTC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGACACGTCCCTGGGCTaGTCGGCTGCCCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVDTSLG*SAAPIW
Trigger: CCAGATTGGGGCAGCCGACAAGCCCAGGGACGTGTC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCAGGCTGCAGCCGCTTaGCGGAAGGCCTCATGTCGC +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVQAAAA*RKASCR
Trigger: GCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGCAGGGGCGCCGCCTaGGCCGCCAGTTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSRGAA*AASSVG
Trigger: CCCCACGGAACTGGCGGCCAAGGCGGCGCCCCTGCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTGGAGGCGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGGCAGCTCAAGCCCGTaGGGCAGGCGACCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRGSSSP*GRRPGG
Trigger: TCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCGTCGAGCTCGCGCTaGCGCAGTAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGAASSSR*RSRKPS
Trigger: CGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS GCA 90 bp CTGAGCCTGCTCCCCGTAGATGTTGCCCTGCCTCAGCAGGCCCTCTaGAGCCTGCACGGCCACCTGCATCTTTTGCTGGCTCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: LSLLPVDVALPQQAL*SLHGHLHLLLAQLH
Trigger: ATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCTGCTGAGGCAGGGCAACATCTACGGGGAGCAGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp CAATTCCAGCGCTGCGCCAACTCCCAACAGCGAAGCTTCAGGTCCTaGTGGACCATTCCTGTGAACTGGCCACGCGCCCGCCCACCTGTC +
Preference number: 5 (lower is better)
Translates to: QFQRCANSQQRSFRS*WTIPVNWPRARPPV
Trigger: GACAGGTGGGCGGGCGCGTGGCCAGTTCACAGGAATGGTCCAGCAGGACCTGAAGCTTCGCTGTTGGGAGTTGGCGCAGCGCTGGAATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGGCAGGCCCTCCATGTaGTCCACTTCCCCTGGTACC +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVGRPSM*STSPGT
Trigger: GGTACCAGGGGAAGTGGACAACATGGAGGGCCTGCC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATTGCAGGCACGCAGTTaGCTCTGGATGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLQARS*LWMLKS
Trigger: GCTCTTCAGCATCCAGAGCAAACTGCGTGCCTGCAA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGACAGGCTGTTCATCTCTaGGTCCAGGCTCTCGAATCG +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRQAVHL*VQALES
Trigger: CGATTCGAGAGCCTGGACCAAGAGATGAACAGCCTG...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCTTCTCCTGCATCAGTaGCTGGCCCTCCCGCTCGAT +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLLLLHQ*LALPLD
Trigger: ATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACTTCTCCTGCATCAGTaGCTGGCCCTCCCGCTCGAT +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLLLHQ*LALPLD
Trigger: ATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GAGGCCGCCAGTTCGGGCTTCTCCTGCATCAGTTGCTGGCCCTCCCGCTCGATCACCAGCTGGTCTGCTTaGCTGGCCTCAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: EAASSGFSCISCWPSRSITSWSA*LASKSC
Trigger: GCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGT...GATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAGCCCGAACTGGCGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTCCTCACCCAGCTCCTaGAGCGCCACGTACAGGCGG +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGASSPSS*SATYRR
Trigger: CCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCTCCTCACCCAGCTCCTaGAGCGCCACGTACAGGCGG +
Preference number: 5 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISSSPSS*SATYRR
Trigger: CCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGA...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCCTCACCCAGCTCCTaGAGCGCCACGTACAGGCGG +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSSPSS*SATYRR
Trigger: CCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGAGCAGGTCGCGGACTaGGCTGTGGAAGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQEQVAD*AVEAQG
Trigger: GCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCTC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGAGCAGGTCGCGGACTaGGCTGTGGAAGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGREQVAD*AVEAQG
Trigger: GCCCTGCGCTTCCACAGCCAAGTCCGCGACCTGCTC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGACACGTCCCTGGGCTaGTCGGCTGCCCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRDTSLG*SAAPIW
Trigger: CCAGATTGGGGCAGCCGACAAGCCCAGGGACGTGTC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCAGGCTGCAGCCGCTTaGCGGAAGGCCTCATGTCGC +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGAQAAAA*RKASCR
Trigger: GCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTGGAGGCGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGCGTCGAGCTCGCGCTaGCGCAGTAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRASSSR*RSRKPS
Trigger: CGAGGGCTTCCTACTGCGCAAGCGCGAGCTCGACGC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCACGCGTCCTCAGTGTaGGAACTAGGGGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLHASSV*ELGAPA
Trigger: GGCGGGAGCCCCTAGTTCCAACACTGAGGACGCGTG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCTCCCCACCACTTCTaGGGGTGCAGGAGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSPHHF*GCRRSP
Trigger: GGGACTTCTCCTGCACCCCAAGAAGTGGTGGGGAGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCACCACCCCAGCTTCTaGGGGCAGGATCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLHHPSF*GQDLQI
Trigger: GATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGTG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGAGGGGCACCTGGGCTaGTCGGCTGCCCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQEGHLG*SAAPIW
Trigger: CCAGATTGGGGCAGCCGACAAGCCCAGGTGCCCCTC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCAGGCCCTCCATGTaGTCCACTTCCCCTGGTACC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRGRPSM*STSPGT
Trigger: GGTACCAGGGGAAGTGGACAACATGGAGGGCCTGCC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGGCAGGCCCTCCATGTaGTCCACTTCCCCTGGTACC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLGRPSM*STSPGT
Trigger: GGTACCAGGGGAAGTGGACAACATGGAGGGCCTGCC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCCTTCTCCTGGAACTaGACAGGCTTCTCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPFSWN*TGFSSV
Trigger: CACGCTGGAGAAGCCTGTCAAGTTCCAGGAGAAGGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGAAGCTCACCCCATGCCTaGTCAATATCCCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRSSPHA*SISQMP
Trigger: TGGCATCTGGGATATTGACAAGGCATGGGGTGAGCT...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCGCAGGGCAGCGGCATaGAGAGCCTCCACCCGCTCG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSRRAAA*RASTRS
Trigger: CGAGCGGGTGGAGGCTCTCAATGCCGCTGCCCTGCG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCACCATCTGGTTCATCCAGGAGACGCTCCTaGTCGCGCGCCCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: WWPLLYGHTRSAHPPSGSSRRRS*SRAQLS
Trigger: CGAGAGCTGGGCGCGCGACAAGGAGCGTCTCCTGGA...TGAACCAGATGGTGGATGAGCTGATCGAGTGTGGCCATACAGCAGCGGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACATGGAGAGCAGCCATaGCTCCTTCTCGCCGATCCA +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSHGEQP*LLLADP
Trigger: TGGATCGGCGAGAAGGAGCAATGGCTGCTCTCCATG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATGGTCCACCTCCTCCTaGAGCGCAGCGTGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTWSTSS*SAAWRA
Trigger: GGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACCA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGGTCCACCTCCTCCTaGAGCGCAGCGTGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSWSTSS*SAAWRA
Trigger: GGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACCA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGGCCACCTGCATCTTTaGCTGGCTCAGCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSGHLHL*LAQLHG
Trigger: ACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATTATGCAGCTTGTGGTaGTCCTCCCGCGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSLCSLW*SSRVPS
Trigger: GGATGGCACGCGGGAGGACAACCACAAGCTGCATAA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGTGCTCCCGGATGCCGGGCCCTTGGAGTCCTTGTAGAAGCCCAGTTCCCCCTTTATGCAGCTTGTGGTaGTCCTCCCGCGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: VCSRMPGPWSPCRSPVPPLCSLW*SSRVPS
Trigger: GGATGGCACGCGGGAGGACAACCACAAGCTGCATAA...AGGGGGAACTGGGCTTCTACAAGGACTCCAAGGGCCCGGCATCCGGGAGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAACCAGCTGGTCTGCTTaGCTGGCCTCAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSTSWSA*LASKSC
Trigger: GCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCAGCTGGTCTGCTTaGCTGGCCTCAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLTSWSA*LASKSC
Trigger: GCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCCAGGGTCCACGTCTaGCAGCTGGCTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSRVHV*QLALHV
Trigger: CACATGGAGAGCCAGCTGCAAGACGTGGACCCTGGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCACCCACCAGCTCCTaGCTCGCCGGCTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSPTSS*LAGSSG
Trigger: GCCGCTGGAGCCGGCGAGCAAGGAGCTGGTGGGTGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCTCATCCACCATCTGGTTCACAGCTGCCAGCCGTTCCCGCCCTGCCATACCTGACCGCCTGCAAACCGTaGCCTCGCTCTGTCTGCATG +
Preference number: 5 (lower is better)
Translates to: AHPPSGSQLPAVPALPYLTACKP*PRSVCM
Trigger: CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGT...CAGGTATGGCAGGGCGGGAACGGCTGGCAGCTGTGAACCAGATGGTGGATGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACCGCC +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLRPWFF*MCCWTA
Trigger: GGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCTCCCGGATGTAGTTCTCCACGCCTaGCTCCAGCTGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: LVALCRLSSGSPPCVLPDVVLHA*LQLQVF
Trigger: AAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTAC...ATCCGGGAGCACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCCTCACCCAGCTCCTaGAGCGCCACGTACAGGCGG +
Preference number: 5 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQSSPSS*SATYRR
Trigger: CCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCCTCACCCAGCTCCTaGAGCGCCACGTACAGGCGG +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSSPSS*SATYRR
Trigger: CCGCCTGTACGTGGCGCTCAAGGAGCTGGGTGAGGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGCCATGGCACTTTTGTaGAGCAGCAGAGATCGCCCC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSAMALL*SSRDRP
Trigger: GGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGGC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATACAGGCTGCAGCCGCTTaGCGGAAGGCCTCATGTCGC +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIQAAAA*RKASCR
Trigger: GCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTG...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTGGAGGCGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGCCTCCA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGGCAGCTCAAGCCCGTaGGGCAGGCGACCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSGSSSP*GRRPGG
Trigger: TCCCCCAGGTCGCCTGCCCAACGGGCTTGAGCTGCC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCTCACCCACGACCGGTaGGACGACTTGCGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLTHDR*DDLRLA
Trigger: CGCTAACCGCAAGTCGTCCAACCGGTCGTGGGTGAG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCTCACCCACGACCGGTaGGACGACTTGCGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGALTHDR*DDLRLA
Trigger: CGCTAACCGCAAGTCGTCCAACCGGTCGTGGGTGAG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCACCTCGCTGGTGGCCTTGTGCAGGCTGAGCAGCGGTTCCCCACCGTGTGTGCCTTCCCTCTTAGGGTaGCCCTCATCTGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: ATSLVALCRLSSGSPPCVPSLLG*PSSVDE
Trigger: TTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGG...CACACACGGTGGGGAACCGCTGCTCAGCCTGCACAAGGCCACCAGCGAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS GCA 90 bp GAAAGTCACGGTGCTGTTTCAAGGCCTCCTCCACCGATTCCACTGTaGCCGGGAGCTCCGCACCAGACAGCGCCATCTCCTGGTTACGCA +
Preference number: 5 (lower is better)
Translates to: ESHGAVSRPPPPIPL*PGAPHQTAPSPGYA
Trigger: TGCGTAACCAGGAGATGGCGCTGTCTGGTGCGGAGCTCCCGGGCACAGTGGAATCGGTGGAGGAGGCCTTGAAACAGCACCGTGACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp GAACCTCGGTGGGACTCTGGACTCCCAGGTTGGGTCCCCAGCCAATaGATCCCACCTCTAGCCCCAATCTCTGAGCCCACTTGGACAGAG +
Preference number: 5 (lower is better)
Translates to: EPRWDSGLPGWVPSQ*IPPLAPISEPTWTE
Trigger: CTCTGTCCAAGTGGGCTCAGAGATTGGGGCTAGAGGTGGGATGCATTGGCTGGGGACCCAACCTGGGAGTCCAGAGTCCCACCGAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCCTTCTCCTGGAACTaGACAGGCTTCTCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPFSWN*TGFSSV
Trigger: CACGCTGGAGAAGCCTGTCAAGTTCCAGGAGAAGGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTTGCAGGCACGCAGTTaGCTCTGGATGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLLQARS*LWMLKS
Trigger: GCTCTTCAGCATCCAGAGCAAACTGCGTGCCTGCAA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATCCCTCATAGCCACCTaGTGGTCAAACCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSLIAT*WSNLCA
Trigger: GGCACAGAGGTTTGACCACAAGGTGGCTATGAGGGA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAAGCTCATACCCAAAGTaGTCCTGGGAGACCAGACGC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSSSYPK*SWETRR
Trigger: GCGTCTGGTCTCCCAGGACAACTTTGGGTATGAGCT...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGACGTGGTTCACGCGGTaGCAGATGACCTGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRTWFTR*QMTCGS
Trigger: CGACCCGCAGGTCATCTGCAACCGCGTGAACCACGT...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCCAGGCTGTTCATCTCTaGGTCCAGGCTCTCGAATCG +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLQAVHL*VQALES
Trigger: CGATTCGAGAGCCTGGACCAAGAGATGAACAGCCTG...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCCTCTTCTAGGCTGTaGGGCAGGGGCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSASSRL*GRGPSL
Trigger: CAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTGCCTCTTCTAGGCTGTaGGGCAGGGGCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGASSRL*GRGPSL
Trigger: CAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGGC...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSHLLCS*WLSSRV
Trigger: CACGCGGGAGGACAACCACAAGCTGCATAAGAGATG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTCCAGGGTCCACGTCTaGCAGCTGGCTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSRVHV*QLALHV
Trigger: CACATGGAGAGCCAGCTGCAAGACGTGGACCCTGGA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTACCGCCTGCAAACCGTaGCCTCGCTCTGTCTGCATG +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGATACKP*PRSVCM
Trigger: CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGACCGCCTGCAAACCGTaGCCTCGCTCTGTCTGCATG +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRTACKP*PRSVCM
Trigger: CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCTCTGTTCGTCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGACGAACAGAGCAC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGGGTGGCCTTCCCCTaGACCAGGTCTCCTCTGATG +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRVAFP*TRSPLM
Trigger: CATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCTCCCCACCACTTCTaGGGGTGCAGGAGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSPHHF*GCRRSP
Trigger: GGGACTTCTCCTGCACCCCAAGAAGTGGTGGGGAGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCACCACCCCAGCTTCTaGGGGCAGGATCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRHHPSF*GQDLQI
Trigger: GATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGTG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCACCACCCCAGCTTCTaGGGGCAGGATCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGAHHPSF*GQDLQI
Trigger: GATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGTG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS GCA 90 bp TGCCTCAGCAGGCCCTCTGCAGCCTGCACGGCCACCTGCATCTTTTaGTGGCTCAGCTCCATGGTGGTGAGAAAGTCACGGTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: CLSRPSAACTATCIF*WLSSMVVRKSRCCF
Trigger: GAAACAGCACCGTGACTTTCTCACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCTGCTGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATTGGACTTGGTGAGTTaGCTGAAGTCCACGAGATCA +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLDLVS*LKSTRS
Trigger: TGATCTCGTGGACTTCAGCAAACTCACCAAGTCCAA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp ATTTTCTCGATCGTGGTCAGGCGCCGCAGAGAGCTGAACCTCTCTTCCCAGGCTACGTGGTTCACGCGGTaGCAGATGACCTGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: IFSIVVRRRRELNLSSQATWFTR*QMTCGS
Trigger: CGACCCGCAGGTCATCTGCAACCGCGTGAACCACGT...AGCCTGGGAAGAGAGGTTCAGCTCTCTGCGGCGCCTGACCACGATCGAGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCATGGAGAGCAGCCATaGCTCCTTCTCGCCGATCCA +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGAHGEQP*LLLADP
Trigger: TGGATCGGCGAGAAGGAGCAATGGCTGCTCTCCATG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCAGGCTGTTCATCTCTaGGTCCAGGCTCTCGAATCG +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVQAVHL*VQALES
Trigger: CGATTCGAGAGCCTGGACCAAGAGATGAACAGCCTG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGCGCTCATTTCCTCTTaGCGCTGTTCCACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVALISS*RCSTSS
Trigger: GGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCGC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTTATGCAGCTTGTGGTaGTCCTCCCGCGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLCSLW*SSRVPS
Trigger: GGATGGCACGCGGGAGGACAACCACAAGCTGCATAA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTTTATGCAGCTTGTGGTaGTCCTCCCGCGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGALCSLW*SSRVPS
Trigger: GGATGGCACGCGGGAGGACAACCACAAGCTGCATAA...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVHLLCS*WLSSRV
Trigger: CACGCGGGAGGACAACCACAAGCTGCATAAGAGATG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCTTCTCCTGCATCAGTaGCTGGCCCTCCCGCTCGAT +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRLLLHQ*LALPLD
Trigger: ATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCTTCTCCTGCATCAGTaGCTGGCCCTCCCGCTCGAT +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNLLLHQ*LALPLD
Trigger: ATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTCCAGGGTCCACGTCTaGCAGCTGGCTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSRVHV*QLALHV
Trigger: CACATGGAGAGCCAGCTGCAAGACGTGGACCCTGGA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATACCGCCTGCAAACCGTaGCCTCGCTCTGTCTGCATG +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNTACKP*PRSVCM
Trigger: CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACCGCC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRRPWFF*MCCWTA
Trigger: GGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCATGTTCGTCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGACGAACA...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGCTGCAGGTGTTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGASCRCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAACACCTGCAGCT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGCTGCAGGTGTTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSCRCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAACACCTGCAGCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGGTAGTTCTCCACGCCTaGCTCCAGCTGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVVVLHA*LQLQVF
Trigger: AAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTAC...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGACACGTCCCTGGGCTaGTCGGCTGCCCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSDTSLG*SAAPIW
Trigger: CCAGATTGGGGCAGCCGACAAGCCCAGGGACGTGTC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGCCATGGCACTTTTGTaGAGCAGCAGAGATCGCCCC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLAMALL*SSRDRP
Trigger: GGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGGC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCAGGCTGCAGCCGCTTaGCGGAAGGCCTCATGTCGC +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSQAAAA*RKASCR
Trigger: GCGACATGAGGCCTTCCGCAAAGCGGCTGCAGCCTG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTGCCCATCCCTAGGGCAGAGATTGCTCTGTTCCGCTTaGATTTTCTCGATCGTGGTC +
Preference number: 5 (lower is better)
Translates to: WMVQGTSPAPPCPSLGQRLLCSA*IFSIVV
Trigger: GACCACGATCGAGAAAATCAAAGCGGAACAGAGCAA...TCTCTGCCCTAGGGATGGGCACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGGGTAGGCGGCTGCTaGCTCTGTTCCGCTTTGATT +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRGVGGC*LCSALI
Trigger: AATCAAAGCGGAACAGAGCAAGCAGCCGCCTACCCC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CATCTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCGCGCCATCAGCGGGGTAGGCGGCTGCTaGCTCTGTTCCGCTTTGATT +
Preference number: 5 (lower is better)
Translates to: HLLCSLWLSSRVPSRAISGVGGC*LCSALI
Trigger: AATCAAAGCGGAACAGAGCAAGCAGCCGCCTACCCC...GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGCTGCATAAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GACTTGGCTGTGGAAGCGCAGGGCGTCGGCTGTGGAGCTGACATGCAGGCGGGCTCTCCTCCTCATCTTTaGCCTGGAGCAAAAACTCAC +
Preference number: 5 (lower is better)
Translates to: DLAVEAQGVGCGADMQAGSPPHL*PGAKTH
Trigger: GTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAGA...GCCCGCCTGCATGTCAGCTCCACAGCCGACGCCCTGCGCTTCCACAGCCAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCACCTTCCCTCTTAGGGTaGCCCTCATCTGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSPSLLG*PSSVDE
Trigger: TTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGG...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCACCACCCCAGCTTCTaGGGGCAGGATCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRHHPSF*GQDLQI
Trigger: GATCTGCAGATCCTGCCCCAAGAAGCTGGGGTGGTG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS TCA 90 bp GGATCCAGGCCAGCAGCTCAGCCGCCAGCTCCTCGTAGCGTTCTATaGTCTTCCCCACCTCCAATACCTGGTCCAAGACCTTCCCGATAC +
Preference number: 5 (lower is better)
Translates to: GSRPAAQPPAPRSVL*SSPPPIPGPRPSRY
Trigger: GTATCGGGAAGGTCTTGGACCAGGTATTGGAGGTGGGGAAGATCATAGAACGCTACGAGGAGCTGGCGGCTGAGCTGCTGGCCTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
ENST00000598775.1
CDS TCA 90 bp GCCTGGAGTTGCTGCTGCACCCCACTTAAGGAGTTGGCAAATTTCTaGTTGCTGATGAGGCCCACGGTGCGGTGGATCCAGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AWSCCCTPLKELANF*LLMRPTVRWIQASS
Trigger: GCTGCTGGCCTGGATCCACCGCACCGTGGGCCTCATCAGCAATCAGAAATTTGCCAACTCCTTAAGTGGGGTGCAGCAGCAACTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
ENST00000598775.1
CDS GCA 90 bp ACCATGTACACCATCTCCTGGAAGACCTTCTGCAGGGCAAGGTTCTaGTCAAGTCGTGTCCGCCGGGCACCCACAAGCCCAGTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: TMYTISWKTFCRARF*SSRVRRAPTSPVSR
Trigger: CCTGCTAACTGGGCTTGTGGGTGCCCGGCGGACACGACTTGAGCAGAACCTTGCCCTGCAGAAGGTCTTCCAGGAGATGGTGTACATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 90 bp ACACAGCAAGGAGGACCTCTCCCACCCAACGTCCAATTCCAGCGCTaGGCCAACTCCCAACAGCGAAGCTTCAGGTCCTGCTGGACCATT +
Preference number: 5 (lower is better)
Translates to: TQQGGPLPPNVQFQR*ANSQQRSFRSCWTI
Trigger: AATGGTCCAGCAGGACCTGAAGCTTCGCTGTTGGGAGTTGGCGCAGCGCTGGAATTGGACGTTGGGTGGGAGAGGTCCTCCTTGCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTTGCAGGCACGCAGTTaGCTCTGGATGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLLQARS*LWMLKS
Trigger: GCTCTTCAGCATCCAGAGCAAACTGCGTGCCTGCAA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGCTCATACCCAAAGTaGTCCTGGGAGACCAGACGC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSSYPK*SWETRR
Trigger: GCGTCTGGTCTCCCAGGACAACTTTGGGTATGAGCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCACGTGGTTCACGCGGTaGCAGATGACCTGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSTWFTR*QMTCGS
Trigger: CGACCCGCAGGTCATCTGCAACCGCGTGAACCACGT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGCATGGAGAGCAGCCATaGCTCCTTCTCGCCGATCCA +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRHGEQP*LLLADP
Trigger: TGGATCGGCGAGAAGGAGCAATGGCTGCTCTCCATG...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGCGCTCATTTCCTCTTaGCGCTGTTCCACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRALISS*RCSTSS
Trigger: GGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCGC...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGCGCTCATTTCCTCTTaGCGCTGTTCCACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGAALISS*RCSTSS
Trigger: GGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCGC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGGCCACCTGCATCTTTaGCTGGCTCAGCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRGHLHL*LAQLHG
Trigger: ACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGGCCACCTGCATCTTTaGCTGGCTCAGCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIGHLHL*LAQLHG
Trigger: ACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATTTATGCAGCTTGTGGTaGTCCTCCCGCGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNLCSLW*SSRVPS
Trigger: GGATGGCACGCGGGAGGACAACCACAAGCTGCATAA...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTTATGCAGCTTGTGGTaGTCCTCCCGCGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRLCSLW*SSRVPS
Trigger: GGATGGCACGCGGGAGGACAACCACAAGCTGCATAA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTCATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGAHLLCS*WLSSRV
Trigger: CACGCGGGAGGACAACCACAAGCTGCATAAGAGATG...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLHLLCS*WLSSRV
Trigger: CACGCGGGAGGACAACCACAAGCTGCATAAGAGATG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATACCAGCTGGTCTGCTTaGCTGGCCTCAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNTSWSA*LASKSC
Trigger: GCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACCGCC +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIRPWFF*MCCWTA
Trigger: GGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACCGCC +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNRPWFF*MCCWTA
Trigger: GGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGTGCTCTGTTCGTCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGACGAACAGAGCAC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATAGCTGCAGGTGTTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNSCRCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAACACCTGCAGCT...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAAGCTGCAGGTGTTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISCRCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAACACCTGCAGCT...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTGTAGTTCTCCACGCCTaGCTCCAGCTGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGAVVLHA*LQLQVF
Trigger: AAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTAC...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGGGGTAGGCGGCTGCTaGCTCTGTTCCGCTTTGATT +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIGVGGC*LCSALI
Trigger: AATCAAAGCGGAACAGAGCAAGCAGCCGCCTACCCC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTCACCCACGACCGGTaGGACGACTTGCGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLTHDR*DDLRLA
Trigger: CGCTAACCGCAAGTCGTCCAACCGGTCGTGGGTGAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGCTCACCCACGACCGGTaGGACGACTTGCGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMLTHDR*DDLRLA
Trigger: CGCTAACCGCAAGTCGTCCAACCGGTCGTGGGTGAG...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCCTTCCCTCTTAGGGTaGCCCTCATCTGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVPSLLG*PSSVDE
Trigger: TTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS TCA 90 bp CCTGCACGGCCACCTGCATCTTTTGCTGGCTCAGCTCCATGGTGGTaGGAAAGTCACGGTGCTGTTTCAAGGCCTCCTCCACCGATTCCA +
Preference number: 5 (lower is better)
Translates to: PARPPASFAGSAPWW*ESHGAVSRPPPPIP
Trigger: TGGAATCGGTGGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 90 bp TGCATCTTTTGCTGGCTCAGCTCCATGGTGGTGAGAAAGTCACGGTaGTGTTTCAAGGCCTCCTCCACCGATTCCACTGTGCCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: CIFCWLSSMVVRKSR*CFKASSTDSTVPGS
Trigger: GCTCCCGGGCACAGTGGAATCGGTGGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCACCACCATGGAGCTGAGCCAGCAAAAGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGAGCGTGTCTCTCTGTaGTCCTCAGTCTCAATTTTG +
Preference number: 5 (lower is better)
Translates to: GVQEKSPPFRCPPCHASSERVSL*SSVSIL
Trigger: CAAAATTGAGACTGAGGACAACAGAGAGACACGCTC...TGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGAGCTCACCCCATGCCTaGTCAATATCCCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRSSPHA*SISQMP
Trigger: TGGCATCTGGGATATTGACAAGGCATGGGGTGAGCT...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGGGCTAGCTCACCCCATGCCTaGTCAATATCCCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: PPFRCPPCHASSVLELGASSPHA*SISQMP
Trigger: TGGCATCTGGGATATTGACAAGGCATGGGGTGAGCT...AGCCCCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCCCTCATAGCCACCTaGTGGTCAAACCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISLIAT*WSNLCA
Trigger: GGCACAGAGGTTTGACCACAAGGTGGCTATGAGGGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGCCTCTTCTAGGCTGTaGGGCAGGGGCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHASSRL*GRGPSL
Trigger: CAGCGAGGGGCCCCTGCCCAACAGCCTAGAAGAGGC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATCATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNHLLCS*WLSSRV
Trigger: CACGCGGGAGGACAACCACAAGCTGCATAAGAGATG...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCTTCTCCTGCATCAGTaGCTGGCCCTCCCGCTCGAT +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLLLHQ*LALPLD
Trigger: ATCGAGCGGGAGGGCCAGCAACTGATGCAGGAGAAG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCCAGGGTCCACGTCTaGCAGCTGGCTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSRVHV*QLALHV
Trigger: CACATGGAGAGCCAGCTGCAAGACGTGGACCCTGGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCACCGCCTGCAAACCGTaGCCTCGCTCTGTCTGCATG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSTACKP*PRSVCM
Trigger: CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGTGCTCTGTTCGTCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGACGAACAGAGCAC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGTGCTCTGTTCGTCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGACGAACAGAGCAC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAAGTAGTTCTCCACGCCTaGCTCCAGCTGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQVVLHA*LQLQVF
Trigger: AAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTAC...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGTAGTTCTCCACGCCTaGCTCCAGCTGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRVVLHA*LQLQVF
Trigger: AAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTAC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGGGTGGCCTTCCCCTaGACCAGGTCTCCTCTGATG +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTRVAFP*TRSPLM
Trigger: CATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TGGGGTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCTCCTGGGTCTGGAGCTaGAAGACATGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: WGAGEVPSFPVPTMSRVLSWVWS*KTCFFF
Trigger: GAAAAAGAAGCATGTCTTCAAGCTCCAGACCCAGGA...GAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCCTTCCCTCTTAGGGTaGCCCTCATCTGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRPSLLG*PSSVDE
Trigger: TTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCCTTCTCCTGGAACTaGACAGGCTTCTCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPFSWN*TGFSSV
Trigger: CACGCTGGAGAAGCCTGTCAAGTTCCAGGAGAAGGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGCATGGAGAGCAGCCATaGCTCCTTCTCGCCGATCCA +
Preference number: 5 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQHGEQP*LLLADP
Trigger: TGGATCGGCGAGAAGGAGCAATGGCTGCTCTCCATG...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAACCAGCTGGTCTGCTTaGCTGGCCTCAAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTTSWSA*LASKSC
Trigger: GCAGCTCTTTGAGGCCAGCAAAGCAGACCAGCTGGT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACCGCC +
Preference number: 5 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGRPWFF*MCCWTA
Trigger: GGCGGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp AGGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGTTCGTCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: RQLGRTADRRMPHDRSPQCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGACGAACA...TTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATGTTCGTCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCICSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGACGAACA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTAGCTGCAGGTGTTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGSCRCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAACACCTGCAGCT...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAGCCATGGCACTTTTGTaGAGCAGCAGAGATCGCCCC +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTAMALL*SSRDRP
Trigger: GGGGCGATCTCTGCTGCTCAACAAAAGTGCCATGGC...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTCTCCTCCTCATCTTTaGCCTGGAGCAAAAACTCAC +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVSPPHL*PGAKTH
Trigger: GTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAGA...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCACGCGTCCTCAGTGTaGGAACTAGGGGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHHASSV*ELGAPA
Trigger: GGCGGGAGCCCCTAGTTCCAACACTGAGGACGCGTG...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS TCA 90 bp AGGTTGGGTCCCCAGCCAATGCATCCCACCTCTAGCCCCAATCTCTaGGCCCACTTGGACAGAGGTCTCTCTCTGTACCTCCTTACAGAT +
Preference number: 5 (lower is better)
Translates to: RLGPQPMHPTSSPNL*AHLDRGLSLYLLTD
Trigger: ATCTGTAAGGAGGTACAGAGAGAGACCTCTGTCCAAGTGGGCTCAGAGATTGGGGCTAGAGGTGGGATGCATTGGCTGGGGACCCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTTGGACTTGGTGAGTTaGCTGAAGTCCACGAGATCA +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRLDLVS*LKSTRS
Trigger: TGATCTCGTGGACTTCAGCAAACTCACCAAGTCCAA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTTGCAGGCACGCAGTTaGCTCTGGATGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLQARS*LWMLKS
Trigger: GCTCTTCAGCATCCAGAGCAAACTGCGTGCCTGCAA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATCCCTCATAGCCACCTaGTGGTCAAACCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSLIAT*WSNLCA
Trigger: GGCACAGAGGTTTGACCACAAGGTGGCTATGAGGGA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACAAGCTCATACCCAAAGTaGTCCTGGGAGACCAGACGC +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTSSYPK*SWETRR
Trigger: GCGTCTGGTCTCCCAGGACAACTTTGGGTATGAGCT...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCCAGGCTGTTCATCTCTaGGTCCAGGCTCTCGAATCG +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSQAVHL*VQALES
Trigger: CGATTCGAGAGCCTGGACCAAGAGATGAACAGCCTG...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGCGCTCATTTCCTCTTaGCGCTGTTCCACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSALISS*RCSTSS
Trigger: GGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCGC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TTTTTGATGTGCTGCTGGACCGCCTGCAAACCGTTGCCTCGCTCTGTCTGCATGGCGCTCATTTCCTCTTaGCGCTGTTCCACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: FLMCCWTACKPLPRSVCMALISS*RCSTSS
Trigger: GGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCGC...CATGCAGACAGAGCGAGGCAACGGTTTGCAGGCGGTCCAGCAGCACATCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp CGATCTCCGCCTTCCCTCTTAGGGTTGCCCTCATCTGTGGATGAAGTAGTGGGTCATCTCTTATGCAGCTaGTGGTTGTCCTCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: RSPPSLLGLPSSVDEVVGHLLCS*WLSSRV
Trigger: CACGCGGGAGGACAACCACAAGCTGCATAAGAGATG...ACCCACTACTTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGGCGGAGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGGTGCTCTGTTCGTCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGACGAACAGAGCAC...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGTTGCTCTGTTCCGCTTaGATTTTCTCGATCGTGGTC +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRLLCSA*IFSIVV
Trigger: GACCACGATCGAGAAAATCAAAGCGGAACAGAGCAA...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGTCTCCTCCTCATCTTTaGCCTGGAGCAAAAACTCAC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLSPPHL*PGAKTH
Trigger: GTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAGA...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGCAACTGGGAAGGACAGCGGACAGAAGGATGCCCCATGACCGAAGTCCCCAATGCTGTTGTCATTCCATaGAGAAGGGGGCTGTCAATG +
Preference number: 5 (lower is better)
Translates to: GNWEGQRTEGCPMTEVPNAVVIP*RRGLSM
Trigger: CATTGACAGCCCCCTTCTCAATGGAATGACAACAGC...ATTGGGGACTTCGGTCATGGGGCATCCTTCTGTCCGCTGTCCTTCCCAGTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392023.1
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGGAGCGTGTCTCTCTGTaGTCCTCAGTCTCAATTTTG +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRERVSL*SSVSIL
Trigger: CAAAATTGAGACTGAGGACAACAGAGAGACACGCTC...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGAGCGTGTCTCTCTGTaGTCCTCAGTCTCAATTTTG +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIERVSL*SSVSIL
Trigger: CAAAATTGAGACTGAGGACAACAGAGAGACACGCTC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCAGCTCACCCCATGCCTaGTCAATATCCCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSSPHA*SISQMP
Trigger: TGGCATCTGGGATATTGACAAGGCATGGGGTGAGCT...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTGTTCGTCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGACGAACA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACAGGGTGGCCTTCCCCTaGACCAGGTCTCCTCTGATG +
Preference number: 5 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHRVAFP*TRSPLM
Trigger: CATCAGAGGAGACCTGGTCAAGGGGAAGGCCACCCT...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCCTGGGTCTGGAGCTaGAAGACATGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSWVWS*KTCFFF
Trigger: GAAAAAGAAGCATGTCTTCAAGCTCCAGACCCAGGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATATCCTGGGTCTGGAGCTaGAAGACATGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCISWVWS*KTCFFF
Trigger: GAAAAAGAAGCATGTCTTCAAGCTCCAGACCCAGGA...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CCCCTCCCAGACAGAGATCAAGGCAGCATTGGAAGTGAGGTAAAGGCGGGGAGGTCTCCTCCTCATCTTTaGCCTGGAGCAAAAACTCAC +
Preference number: 5 (lower is better)
Translates to: PLPDRDQGSIGSEVKAGRSPPHL*PGAKTH
Trigger: GTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAGA...CCTCCCCGCCTTTACCTCACTTCCAATGCTGCCTTGATCTCTGTCTGGGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACCTTCCCTCTTAGGGTaGCCCTCATCTGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTPSLLG*PSSVDE
Trigger: TTCATCCACAGATGAGGGCAACCCTAAGAGGGAAGG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAAGAAAAAGTGTCTTaGTGCCCACAGTGCGGAAAA +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLEEKVS*CPQCGK
Trigger: TTTTCCGCACTGTGGGCACAAAGACACTTTTTCTTC...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS GCA 90 bp AGCCGTTCATCTCCTCCTCATCTTTTGCCTGGAGCAAAAACTCACTaGCATCCTGGGTCCTGCAGGAAGGGACACAGGACTTCAGAGATC +
Preference number: 5 (lower is better)
Translates to: SRSSPPHLLPGAKTH*HPGSCRKGHRTSEI
Trigger: GATCTCTGAAGTCCTGTGTCCCTTCCTGCAGGACCCAGGATGGCAGTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAGATGAACGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596411.1
CDS-3UTR CAA 90 bp GTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGGAACTAGGCTCAATTTTGATGACTaGAATCTGGAAGCGCAGGAT +
Preference number: 5 (lower is better)
Translates to: VPSFPVPTMSRVLSVGTRLNFDD*NLEAQD
Trigger: ATCCTGCGCTTCCAGATTCAAGTCATCAAAATTGAG...CCTAGTTCCAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GGGCTTGGCTCAACTGGCCCCCTGCCCACCCCCATCAAGCTCAGTTATTGCATAGAAGAAAAAGTGTCTTaGTGCCCACAGTGCGGAAAA +
Preference number: 5 (lower is better)
Translates to: GLGSTGPLPTPIKLSYCIEEKVS*CPQCGK
Trigger: TTTTCCGCACTGTGGGCACAAAGACACTTTTTCTTC...TATGCAATAACTGAGCTTGATGGGGGTGGGCAGGGGGCCAGTTGAGCCAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GTGCAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGCATCAAGCTCAGTTATaGCATAAAAATAAGGGACCC +
Preference number: 5 (lower is better)
Translates to: VQEKSPPFRCPPCHASSVHQAQL*HKNKGP
Trigger: GGGTCCCTTATTTTTATGCAATAACTGAGCTTGATG...CACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS GCA 90 bp AGGAAGTGCTGCAGCTCAAGTTGGTCATGTAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTTTCTTGGTTCTTCTCCAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RKCCSSSWSCSFCIH*WARNWFSWFFSSSR
Trigger: CCGGCTGCTGGAGAAGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCAGCACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 90 bp AGGTCCACACAGAGGGAGGAAAGGACCAGATCTCACCTCATCTTTTaGCTGGAGCAAAAACTCACTGCCATCCTGGGTCTGGAGCTTGAA +
Preference number: 5 (lower is better)
Translates to: RSTQREERTRSHLIF*LEQKLTAILGLELE
Trigger: TTCAAGCTCCAGACCCAGGATGGCAGTGAGTTTTTGCTCCAGGCAAAAGATGAGGTGAGATCTGGTCCTTTCCTCCCTCTGTGTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593816.1
CDS GCA 90 bp AGGAAGTGCTGCAGCTCAAGTTGGTCATGTAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTTTCTTGGTTCCTGTGCCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RKCCSSSWSCSFCIH*WARNWFSWFLCLAS
Trigger: AGAGGCCAGGCACAGGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCAGCACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTTGGACTTGGTGAGTTaGCTGAAGTCCACGAGATCA +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLDLVS*LKSTRS
Trigger: TGATCTCGTGGACTTCAGCAAACTCACCAAGTCCAA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTCCCTCATAGCCACCTaGTGGTCAAACCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHSLIAT*WSNLCA
Trigger: GGCACAGAGGTTTGACCACAAGGTGGCTATGAGGGA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CAA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACGTAGTTCTCCACGCCTaGCTCCAGCTGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHVVLHA*LQLQVF
Trigger: AAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTAC...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACATTGCTCTGTTCCGCTTaGATTTTCTCGATCGTGGTC +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTLLCSA*IFSIVV
Trigger: GACCACGATCGAGAAAATCAAAGCGGAACAGAGCAA...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp TTCCCCCTTACTAAGCACACAGTACAGGCTCACCCACGACCGGTTGGACGACTTTTGCTCTGTTCCGCTTaGATTTTCTCGATCGTGGTC +
Preference number: 5 (lower is better)
Translates to: FPLTKHTVQAHPRPVGRLLLCSA*IFSIVV
Trigger: GACCACGATCGAGAAAATCAAAGCGGAACAGAGCAA...AAGTCGTCCAACCGGTCGTGGGTGAGCCTGTACTGTGTGCTTAGTAAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTTGCTCTGTTCCGCTTaGATTTTCTCGATCGTGGTC +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSLLCSA*IFSIVV
Trigger: GACCACGATCGAGAAAATCAAAGCGGAACAGAGCAA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCTTTCCTCGTAGTTCTCCACGCCTTGCTCCAGCTGCAGGTGTTTCTTGAGCAGTCCTGGGTCTGGAGCTaGAAGACATGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: AFLVVLHALLQLQVFLEQSWVWS*KTCFFF
Trigger: GAAAAAGAAGCATGTCTTCAAGCTCCAGACCCAGGA...CTGCTCAAGAAACACCTGCAGCTGGAGCAAGGCGTGGAGAACTACGAGGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCTCTCCTCCTCATCTTTaGCCTGGAGCAAAAACTCAC +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSSPPHL*PGAKTH
Trigger: GTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAGA...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp CAGGAGAAGTCCCCTCCTTTCCGGTGCCCACCATGTCACGCGTCCTCAGTGTTGCATCAAGCTCAGTTATaGCATAAAAATAAGGGACCC +
Preference number: 5 (lower is better)
Translates to: QEKSPPFRCPPCHASSVLHQAQL*HKNKGP
Trigger: GGGTCCCTTATTTTTATGCAATAACTGAGCTTGATG...CAACACTGAGGACGCGTGACATGGTGGGCACCGGAAAGGAGGGGACTTCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS GCA 90 bp CAGTCTCGGAGGAAGTGCTGCAGCTCAAGTTGGTCATGTAGCTTTTaGATCCATTGCTGGGCCCGTAACTGGTTTTCTTGGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QSRRKCCSSSWSCSF*IHCWARNWFSWFFS
Trigger: GGAGAAGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCAGCACTTCCTCCGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS-3UTR CAA 90 bp ACCGTCAAAGCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACTGTTCGTCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: TVKAKGFIIGTYSVRPPHCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGACGAACA...GTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGCTTTGACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352632.7
ENST00000598249.6
CDS-3UTR CAA 90 bp AGTGTCTTTGTGCCCACAGTGCGGAAAAGAGGGGAGACGAGATGTGTCAGGTCCGAAGAAAAAGTGTCTTaGTGCCCACAGTGCGGAAAA +
Preference number: 5 (lower is better)
Translates to: SVFVPTVRKRGETRCVRSEEKVS*CPQCGK
Trigger: TTTTCCGCACTGTGGGCACAAAGACACTTTTTCTTC...GGACCTGACACATCTCGTCTCCCCTCTTTTCCGCACTGTGGGCACAAAGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS-3UTR CAA 90 bp GCCAAAGGGTTTATTATAGGTACATACAGTGTGCGCCCGCCACACCGCCCCACACATCAAGCTCAGTTATaGCATAAAAATAAGGGACCC +
Preference number: 5 (lower is better)
Translates to: AKGFIIGTYSVRPPHRPTHQAQL*HKNKGP
Trigger: GGGTCCCTTATTTTTATGCAATAACTGAGCTTGATG...TGTGGGGCGGTGTGGCGGGCGCACACTGTATGTACCTATAATAAACCCTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000598249.6
CDS GCA 90 bp TGGGATGAGTTCAGTGAGTGCTTGGCCCAGAGACTGGTAGAGAAATaGTCAATGAATGTCATTGTTATTCCATGCAAAGCCATTCCCATA +
Preference number: 5 (lower is better)
Translates to: WDEFSECLAQRLVEK*SMNVIVIPCKAIPI
Trigger: TATGGGAATGGCTTTGCATGGAATAACAATGACATTCATTGAGCATTTCTCTACCAGTCTCTGGGCCAAGCACTCACTGAACTCATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS GCA 90 bp ATCCTTCCTTTTCCCTTTGTACTCCATACCTTAGGGAGTGGTGGCTaGTTCCAACAGTTATTACTAGCTGGATTGCTTCAATATTCCCTT +
Preference number: 5 (lower is better)
Translates to: ILPFPFVLHTLGSGG*FQQLLLAGLLQYSL
Trigger: AAGGGAATATTGAAGCAATCCAGCTAGTAATAACTGTTGGAAGCAGCCACCACTCCCTAAGGTATGGAGTACAAAGGGAAAAGGAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS GCA 72 bp CAGCTGGCGCCGCAGGCCGCTCACGGGCCCGCGATGTaGCTCCACCTCCCCGGTGAGCGCGCGGTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: QLAPQAAHGPAM*LHLPGERAVLA
Trigger: CGCCAGCACCGCGCGCTCACCGGGGAGGTGGAGGCACATCGCGGGCCCGTGAGCGGCCTGCGGCGCCAGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp GGCCCTGCGCCACTGGCACCCCCGAGTGTCGCCAGCTaGCGCCGCAGGCCGCTCACGGGCCCGCGATGTGCC +
Preference number: 6 (lower is better)
Translates to: GPAPLAPPSVAS*RRRPLTGPRCA
Trigger: GGCACATCGCGGGCCCGTGAGCGGCCTGCGGCGCCAGCTGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CCGGCCGCAACCAGCTCCTCGCCACACCGCAGGGCCTaGTGCAGCAACGCTCGCCGCCCGCCCAGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: PAATSSSPHRRA*CSNARRPPSSP
Trigger: GGGCGAGCTGGGCGGGCGGCGAGCGTTGCTGCAGCAGGCCCTGCGGTGTGGCGAGGAGCTGGTTGCGGCCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CGCGCGCTCCGCCAGGCCTACCAGGTGCACGGTGTCTaGTCCCGGGCCGACGGCACCGCCGGCCGCAACCAG +
Preference number: 6 (lower is better)
Translates to: RALRQAYQVHGV*SRADGTAGRNQ
Trigger: CTGGTTGCGGCCGGCGGTGCCGTCGGCCCGGGAGCAGACACCGTGCACCTGGTAGGCCTGGCGGAGCGCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp AGGTCAGCGCCGAACTGGTGCAGCGCCCGCGCCTCCTaGAGCCGCCGCTCTCGCCGCGCCGCCGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: RSAPNWCSARAS*SRRSRRAAASS
Trigger: GGAAGAGGCGGCGGCGCGGCGAGAGCGGCGGCTGCAGGAGGCGCGGGCGCTGCACCAGTTCGGCGCTGACCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CGCGAAGCCTCCAGCTCCGCGCGTCGCCGCGCTGCCTaGTCCTGCAGCTCCGCCAGGCAGCCGTGCACGTGG +
Preference number: 6 (lower is better)
Translates to: REASSSARRRAA*SCSSARQPCTW
Trigger: CCACGTGCACGGCTGCCTGGCGGAGCTGCAGGAGCAGGCAGCGCGGCGACGCGCGGAGCTGGAGGCTTCGCG
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp TGCTGGGCCAGGAGGCGCGCTGTGCTGGACAGGTCATaGGCGCCGCCCGCTGTTCCCGCTGCGCCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: CWARRRAVLDRS*APPAVPAAPAA
Trigger: CGCAGCGGGCGCAGCGGGAACAGCGGGCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGGCCCAGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CCGCGATGTGCCTCCACCTCCCCGGTGAGCGCGCGGTaGTGGCGCGCCAGGCGGCGGCTGGAAGCTTCGTCG +
Preference number: 6 (lower is better)
Translates to: PRCASTSPVSAR*WRARRRLEASS
Trigger: CGACGAAGCTTCCAGCCGCCGCCTGGCGCGCCAGCACCGCGCGCTCACCGGGGAGGTGGAGGCACATCGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp GCACCTGCAGCGCCACCACCAGTGGCCCTGCGCCACTaGCACCCCCGAGTGTCGCCAGCTGGCGCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: APAAPPPVALRH*HPRVSPAGAAG
Trigger: GCCTGCGGCGCCAGCTGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTGCAGGTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CACCACGCGCACCTGCAGCGCCACCACCAGTGGCCCTaGGCCACTGGCACCCCCGAGTGTCGCCAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: HHAHLQRHHQWP*ATGTPECRQLA
Trigger: CGCCAGCTGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp CGCCGGGCACCCACAAGCCCAGTTAGCAGGGCCCACTaGCGCAGGACGCTGTCACGCTGGGCTGCCACCCGC +
Preference number: 6 (lower is better)
Translates to: RRAPTSPVSRAH*RRTLSRWAATR
Trigger: GCGGGTGGCAGCCCAGCGTGACAGCGTCCTGCGCCAGTGGGCCCTGCTAACTGGGCTTGTGGGTGCCCGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 72 bp TGCTGCAGCAACGCTCGCCGCCCGCCCAGCTCGCCCTaGAGGATCTTGTGCTGGGCCAGGAGGCGCGCTGTG +
Preference number: 6 (lower is better)
Translates to: CCSNARRPPSSP*RILCWARRRAV
Trigger: CACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCAGGGCGAGCTGGGCGGGCGGCGAGCGTTGCTGCAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp TCCTCCAGAAGGGCCGCCTGGCGCGGCTCCAGCGCCTaGAGAGCGGCCTCTAGGCCGCTAAGACGCCACTGC +
Preference number: 6 (lower is better)
Translates to: SSRRAAWRGSSA*RAASRPLRRHC
Trigger: GCAGTGGCGTCTTAGCGGCCTAGAGGCCGCTCTGCAGGCGCTGGAGCCGCGCCAGGCGGCCCTTCTGGAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp CGCCGCCCGCCCAGCTCGCCCTGCAGGATCTTGTGCTaGGCCAGGAGGCGCGCTGTGCTGGACAGGTCATGC +
Preference number: 6 (lower is better)
Translates to: RRPPSSPCRILC*ARRRAVLDRSC
Trigger: GCATGACCTGTCCAGCACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCAGGGCGAGCTGGGCGGGCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp TGCTTCCACCACGCGCACCTGCAGCGCCACCACCAGTaGCCCTGCGCCACTGGCACCCCCGAGTGTCGCCAG +
Preference number: 6 (lower is better)
Translates to: CFHHAHLQRHHQ*PCATGTPECRQ
Trigger: CTGGCGACACTCGGGGGTGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGAAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp GGCAGGCCCTCCATGTTGTCCACTTCCCCTGGTACCTaGGCCATCGGGGAAGGTGAGGCCTGGGCCCGCGGC +
Preference number: 6 (lower is better)
Translates to: GRPSMLSTSPGT*AIGEGEAWARG
Trigger: GCCGCGGGCCCAGGCCTCACCTTCCCCGATGGCGCAGGTACCAGGGGAAGTGGACAACATGGAGGGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000598249.6
CDS GCA 72 bp CCTGCAGGATCTTGTGCTGGGCCAGGAGGCGCGCTGTaGTGGACAGGTCATGCGCGCCGCCCGCTGTTCCCG +
Preference number: 6 (lower is better)
Translates to: PAGSCAGPGGAL*WTGHARRPLFP
Trigger: CGGGAACAGCGGGCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp GCAGGATCTTGTGCTGGGCCAGGAGGCGCGCTGTGCTaGACAGGTCATGCGCGCCGCCCGCTGTTCCCGCTG +
Preference number: 6 (lower is better)
Translates to: AGSCAGPGGALC*TGHARRPLFPL
Trigger: CAGCGGGAACAGCGGGCGGCGCGCATGACCTGTCCAGCACAGCGCGCCTCCTGGCCCAGCACAAGATCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp TCCTCGCGCTGGTCCACCTCCTCCTTGAGCGCAGCGTaGCGCGCCAGCAGCGCGTCCGCCTCTTCTAGGCTG +
Preference number: 6 (lower is better)
Translates to: SSRWSTSSLSAA*RASSASASSRL
Trigger: CAGCCTAGAAGAGGCGGACGCGCTGCTGGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACCAGCGCGAGGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS TCA 72 bp GAGCATAGTCTTCCTCGCGCTGGTCCACCTCCTCCTTaGGCGCAGCGTGGCGCGCCAGCAGCGCGTCCGCCT +
Preference number: 6 (lower is better)
Translates to: EHSLPRAGPPPP*AQRGAPAARPP
Trigger: AGGCGGACGCGCTGCTGGCGCGCCACGCTGCGCTCAAGGAGGAGGTGGACCAGCGCGAGGAAGACTATGCTC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CAGGGCCCACTGGCGCAGGACGCTGTCACGCTGGGCTaGCACCCGCCGGATATCGTAGTAGCCTTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: QGPLAQDAVTLG*HPPDIVVAFGC
Trigger: GCAGCCGAAGGCTACTACGATATCCGGCGGGTGGCAGCCCAGCGTGACAGCGTCCTGCGCCAGTGGGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS CCA 72 bp GGGAGGCAGGAAGCCCGAGGAGGGATGAGGGGCACCTaGGCTTGTCGGCTGCCCCAATCTGGCTGGCGATGC +
Preference number: 6 (lower is better)
Translates to: GRQEARGGMRGT*ACRLPQSGWRC
Trigger: GCATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGGTGCCCCTCATCCCTCCTCGGGCTTCCTGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392023.1
ENST00000595535.5
CDS CAA 90 bp CATGCCCAGCTCGTCGTCCAGTCGTGCGCCACCTGGTGCAACTCCTaGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACGGCTCGAGC +
Preference number: 6 (lower is better)
Translates to: HAQLVVQSCATWCNS*EASSKRRRSCNGSS
Trigger: GCTCGAGCCGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACTGGACGACGAGCTGGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS TCA 72 bp AGCCCTGCAGCTGGGAGAAGCGCAGGGCAGCGGCATTaGGAGCCTCCACCCGCTCGCTCTGGGCGGCAATGT +
Preference number: 6 (lower is better)
Translates to: SPAAGRSAGQRH*EPPPARSGRQC
Trigger: ACATTGCCGCCCAGAGCGAGCGGGTGGAGGCTCTCAATGCCGCTGCCCTGCGCTTCTCCCAGCTGCAGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS TCA 72 bp CCAGGCAGCCGTGCACGTGGTTCACGCGGTTGCAGATaGCCTGCGGGTCGCAGGGCTGGTAGCCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: PGSRARGSRGCR*PAGRRAGSPAA
Trigger: AGCTGCAGGGCTACCAGCCCTGCGACCCGCAGGTCATCTGCAACCGCGTGAACCACGTGCACGGCTGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 72 bp CACCCGCCGGATATCGTAGTAGCCTTCGGCTGCCAATaGCTGGGCCAGCTCCGCCACACCCTGCACCCGCTC +
Preference number: 6 (lower is better)
Translates to: HPPDIVVAFGCQ*LGQLRHTLHPL
Trigger: GAGCGGGTGCAGGGTGTGGCGGAGCTGGCCCAGGCATTGGCAGCCGAAGGCTACTACGATATCCGGCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 72 bp GGCTGCCACCCGCCGGATATCGTAGTAGCCTTCGGCTaGCAATGCCTGGGCCAGCTCCGCCACACCCTGCAC +
Preference number: 6 (lower is better)
Translates to: GCHPPDIVVAFG*QCLGQLRHTLH
Trigger: GTGCAGGGTGTGGCGGAGCTGGCCCAGGCATTGGCAGCCGAAGGCTACTACGATATCCGGCGGGTGGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 72 bp GCTGGAAGCTTCGTCGTGGCCGAAGTCACCGGCGGCTaGCAGGCGGTAAGCGTCGCGAAGCCAGTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: AGSFVVAEVTGG*QAVSVAKPVQQ
Trigger: CTGCTGGACTGGCTTCGCGACGCTTACCGCCTGGCAGCCGCCGGTGACTTCGGCCACGACGAAGCTTCCAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CATGCCCAGCTCGTCGTCCAGTCGTGCGCCACCTGGTaGAACTCCTTGGAAGCCAGCAGCAAGCGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: HAQLVVQSCATW*NSLEASSKRRR
Trigger: GCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACTGGACGACGAGCTGGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS CCA 72 bp CGCACCTGGGCGCGCACCTCGGCCACCTCCAGCACGTaGTTCTCCACCAGCAGCACCGCGCTCATTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RTWARTSATSST*FSTSSTALISS
Trigger: AGAGGAAATGAGCGCGGTGCTGCTGGTGGAGAACCACGTGCTGGAGGTGGCCGAGGTGCGCGCCCAGGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp TCAGCGAACAACTGCTCTGCTTCCACCACGCGCACCTaGAGCGCCACCACCAGTGGCCCTGCGCCACTGGCA +
Preference number: 6 (lower is better)
Translates to: SANNCSASTTRT*SATTSGPAPLA
Trigger: TGCCAGTGGCGCAGGGCCACTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CGCCGCCACTTCGGTCACCTCAGCGAACAACTGCTCTaGTTCCACCACGCGCACCTGCAGCGCCACCACCAG +
Preference number: 6 (lower is better)
Translates to: RRHFGHLSEQLL*FHHAHLQRHHQ
Trigger: CTGGTGGTGGCGCTGCAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGTGACCGAAGTGGCGGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CTCAGCGCCGCCACTTCGGTCACCTCAGCGAACAACTaGTCTGCTTCCACCACGCGCACCTGCAGCGCCACC +
Preference number: 6 (lower is better)
Translates to: LSAATSVTSANN*SASTTRTCSAT
Trigger: GGTGGCGCTGCAGGTGCGCGTGGTGGAAGCAGAGCAGTTGTTCGCTGAGGTGACCGAAGTGGCGGCGCTGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp TCGTCGTCCAGTCGTGCGCCACCTGGTGCAACTCCTTaGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAACG +
Preference number: 6 (lower is better)
Translates to: SSSSRAPPGATP*KPAASGGAPAT
Trigger: CGTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACTGGACGACGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS CCA 72 bp ACCCATGCCCAGCTCGTCGTCCAGTCGTGCGCCACCTaGTGCAACTCCTTGGAAGCCAGCAGCAAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: THAQLVVQSCAT*CNSLEASSKRR
Trigger: CCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACTGGACGACGAGCTGGGCATGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS CAA 72 bp CTCGTCGTCCAGTCGTGCGCCACCTGGTGCAACTCCTaGGAAGCCAGCAGCAAGCGGCGGCGCTCCTGCAAC +
Preference number: 6 (lower is better)
Translates to: LVVQSCATWCNS*EASSKRRRSCN
Trigger: GTTGCAGGAGCGCCGCCGCTTGCTGCTGGCTTCCAAGGAGTTGCACCAGGTGGCGCACGACTGGACGACGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338932.7
ENST00000392025.5
CDS GCA 72 bp AGAGCTGGTAGATGTGCGCCTGGACCAGCGCCTCCCTaGGCGCCTCCCACAAGCCGAGCAGTTTATGCCAGC +
Preference number: 6 (lower is better)
Translates to: RAGRCAPGPAPP*APPTSRAVYAS
Trigger: GCTGGCATAAACTGCTCGGCTTGTGGGAGGCGCGCAGGGAGGCGCTGGTCCAGGCGCACATCTACCAGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp ACCTGGGCTTGTCGGCTGCCCCAATCTGGCTGGCGATaGCATCCATCCAGGAGAGCAGGTCGCGGACTTGGC +
Preference number: 6 (lower is better)
Translates to: TWACRLPQSGWR*HPSRRAGRGLG
Trigger: GCCAAGTCCGCGACCTGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392023.1
ENST00000595535.5
CDS GCA 72 bp CGCTGCGCCAACTCCCAACAGCGAAGCTTCAGGTCCTaGTGGACCATTCCTGTGAACTGGCCACGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: RCANSQQRSFRS*WTIPVNWPRAR
Trigger: GCGGGCGCGTGGCCAGTTCACAGGAATGGTCCAGCAGGACCTGAAGCTTCGCTGTTGGGAGTTGGCGCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS CCA 72 bp AGGGCAGCGGCATTGAGAGCCTCCACCCGCTCGCTCTaGGCGGCAATGTCTCCCTCCAGCAGTCCATGCTTC +
Preference number: 6 (lower is better)
Translates to: RAAALRASTRSL*AAMSPSSSPCF
Trigger: GAAGCATGGACTGCTGGAGGGAGACATTGCCGCCCAGAGCGAGCGGGTGGAGGCTCTCAATGCCGCTGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS CCA 72 bp GATGAGGGGCACCTGGGCTTGTCGGCTGCCCCAATCTaGCTGGCGATGCCATCCATCCAGGAGAGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: DEGHLGLSAAPI*LAMPSIQESRS
Trigger: CGACCTGCTCTCCTGGATGGATGGCATCGCCAGCCAGATTGGGGCAGCCGACAAGCCCAGGTGCCCCTCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392023.1
ENST00000595535.5
CDS GCA 72 bp GCCTCCCTGCGCGCCTCCCACAAGCCGAGCAGTTTATaGCAGCCAAGTTCGAGGTGTGGCAGCCACTCGTCT +
Preference number: 6 (lower is better)
Translates to: ASLRASHKPSSL*QPSSRCGSHSS
Trigger: AGACGAGTGGCTGCCACACCTCGAACTTGGCTGGCATAAACTGCTCGGCTTGTGGGAGGCGCGCAGGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp GGTGCTGTTTCAAGGCCTCCTCCACCGATTCCACTGTaGCCGGGAGCTCCGCACCAGACAGCGCCATCTCCT +
Preference number: 6 (lower is better)
Translates to: GAVSRPPPPIPL*PGAPHQTAPSP
Trigger: AGGAGATGGCGCTGTCTGGTGCGGAGCTCCCGGGCACAGTGGAATCGGTGGAGGAGGCCTTGAAACAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp CCCACCAAGTGTCCCCCAGGGAAGCCAGGGTCCCACTaGGAGTTGAAGCTGAGCCTTGGATCCCTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: PTKCPPGKPGSH*ELKLSLGSLPP
Trigger: AGGAGGGAGGGATCCAAGGCTCAGCTTCAACTCCCAGTGGGACCCTGGCTTCCCTGGGGGACACTTGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596411.1
CDS CCA 72 bp TCACGCCCCTCCTATCCAGGAACCTCGGTGGGACTCTaGACTCCCAGGTTGGGTCCCCAGCCAATGCATCCC +
Preference number: 6 (lower is better)
Translates to: SRPSYPGTSVGL*TPRLGPQPMHP
Trigger: GGGATGCATTGGCTGGGGACCCAACCTGGGAGTCCAGAGTCCCACCGAGGTTCCTGGATAGGAGGGGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS GCA 72 bp CGAATCAGCTCAGCCCGTAGGGCAGCCTCCCGCTCATaGTCAGCCTTCTCCAGCTCACCCCATGCCTTGTCA +
Preference number: 6 (lower is better)
Translates to: RISSARRAASRS*SAFSSSPHALS
Trigger: TGACAAGGCATGGGGTGAGCTGGAGAAGGCTGAGCATGAGCGGGAGGCTGCCCTACGGGCTGAGCTGATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 72 bp TCGCTCTGGGCGGCAATGTCTCCCTCCAGCAGTCCATaGTTCTGCAACAGGTCGTCTGCCTCCACCAGGTGC +
Preference number: 6 (lower is better)
Translates to: SLWAAMSPSSSP*FCNRSSASTRC
Trigger: GCACCTGGTGGAGGCAGACGACCTGTTGCAGAAGCATGGACTGCTGGAGGGAGACATTGCCGCCCAGAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 72 bp GGCAGGCCCTCCATGTTGTCCACTTCCCCTGGTACCTaGGCCATCGGGGAAGGTGAGGCTCAGAGGATGACA +
Preference number: 6 (lower is better)
Translates to: GRPSMLSTSPGT*AIGEGEAQRMT
Trigger: TGTCATCCTCTGAGCCTCACCTTCCCCGATGGCGCAGGTACCAGGGGAAGTGGACAACATGGAGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
CDS GCA 72 bp GGAGGACCTCTCCCACCCAACGTCCAATTCCAGCGCTaGGCCAACTCCCAACAGCGAAGCTTCAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: GGPLPPNVQFQR*ANSQQRSFRSC
Trigger: GCAGGACCTGAAGCTTCGCTGTTGGGAGTTGGCGCAGCGCTGGAATTGGACGTTGGGTGGGAGAGGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS CCA 72 bp ATCCAGGAACCTCGGTGGGACTCTGGACTCCCAGGTTaGGTCCCCAGCCAATGCATCCCACCTCTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: IQEPRWDSGLPG*VPSQCIPPLAP
Trigger: TGGGGCTAGAGGTGGGATGCATTGGCTGGGGACCCAACCTGGGAGTCCAGAGTCCCACCGAGGTTCCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS CAA 72 bp TATCCAGGAACCTCGGTGGGACTCTGGACTCCCAGGTaGGGTCCCCAGCCAATGCATCCCACCTCTAGCCCC +
Preference number: 6 (lower is better)
Translates to: YPGTSVGLWTPR*GPQPMHPTSSP
Trigger: GGGGCTAGAGGTGGGATGCATTGGCTGGGGACCCAACCTGGGAGTCCAGAGTCCCACCGAGGTTCCTGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS TCA 72 bp CTCGAATCGGTGCTGCACCACCTCGACGTCGTCGAGTaGATCCGGCACACGCATGGAGAGCAGCCATTGCTC +
Preference number: 6 (lower is better)
Translates to: LESVLHHLDVVE*IRHTHGEQPLL
Trigger: GAGCAATGGCTGCTCTCCATGCGTGTGCCGGATTCACTCGACGACGTCGAGGTGGTGCAGCACCGATTCGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp AGGCCCTCTGCAGCCTGCACGGCCACCTGCATCTTTTaGTGGCTCAGCTCCATGGTGGTGAGAAAGTCACGG +
Preference number: 6 (lower is better)
Translates to: RPSAACTATCIF*WLSSMVVRKSR
Trigger: CCGTGACTTTCTCACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp TGGGACTCTGGACTCCCAGGTTGGGTCCCCAGCCAATaGATCCCACCTCTAGCCCCAATCTCTGAGCCCACT +
Preference number: 6 (lower is better)
Translates to: WDSGLPGWVPSQ*IPPLAPISEPT
Trigger: AGTGGGCTCAGAGATTGGGGCTAGAGGTGGGATGCATTGGCTGGGGACCCAACCTGGGAGTCCAGAGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS CCA 72 bp CCACCTCGACGTCGTCGAGTGAATCCGGCACACGCATaGAGAGCAGCCATTGCTCCTTCTCGCCGATCCACA +
Preference number: 6 (lower is better)
Translates to: PPRRRRVNPAHA*RAAIAPSRRST
Trigger: TGTGGATCGGCGAGAAGGAGCAATGGCTGCTCTCCATGCGTGTGCCGGATTCACTCGACGACGTCGAGGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp ACGTCCAGAACGCGGCCCATCAGGCTGTTCATCTCTTaGTCCAGGCTCTCGAATCGGTGCTGCACCACCTCG +
Preference number: 6 (lower is better)
Translates to: TSRTRPIRLFIS*SRLSNRCCTTS
Trigger: CGAGGTGGTGCAGCACCGATTCGAGAGCCTGGACCAAGAGATGAACAGCCTGATGGGCCGCGTTCTGGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp TCATCTGAACTGGGGTGGCCTCCTTCCACCAGCTCCTaGACTGTGTGGTTCACGTCCAGAACGCGGCCCATC +
Preference number: 6 (lower is better)
Translates to: SSELGWPPSTSS*TVWFTSRTRPI
Trigger: GATGGGCCGCGTTCTGGACGTGAACCACACAGTCCAGGAGCTGGTGGAAGGAGGCCACCCCAGTTCAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp TGGTCCTGGCAGGAACGCACCTCATCTGAACTGGGGTaGCCTCCTTCCACCAGCTCCTGGACTGTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: WSWQERTSSELG*PPSTSSWTVWF
Trigger: GAACCACACAGTCCAGGAGCTGGTGGAAGGAGGCCACCCCAGTTCAGATGAGGTGCGTTCCTGCCAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp TCCACGATGCGGTTCCACCTGCTGTTGAGGTGGTCCTaGCAGGAACGCACCTCATCTGAACTGGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: STMRFHLLLRWS*QERTSSELGWP
Trigger: AGGCCACCCCAGTTCAGATGAGGTGCGTTCCTGCCAGGACCACCTCAACAGCAGGTGGAACCGCATCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp TCTTGGTTCCTGTGCCTGGCCTCTAGCTGCTGGATCTaGGGAGGTCTGGGGGTTCCCAAGGAGGGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: SWFLCLASSCWI*GGLGVPKEGAE
Trigger: TTCTGCACCCTCCTTGGGAACCCCCAGACCTCCCCAGATCCAGCAGCTAGAGGCCAGGCACAGGAACCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS CCA 72 bp CACTTGACATACCTTGAGTGGGGTTGGACCCTGACCTaGCCCCCATGTGGCATAGGGAGCCCTCATCTGGGC +
Preference number: 6 (lower is better)
Translates to: HLTYLEWGWTLT*PPCGIGSPHLG
Trigger: GCCCAGATGAGGGCTCCCTATGCCACATGGGGGCCAGGTCAGGGTCCAACCCCACTCAAGGTATGTCAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS CAA 72 bp CACGTCCAGAACGCGGCCCATCAGGCTGTTCATCTCTaGGTCCAGGCTCTCGAATCGGTGCTGCACCACCTC +
Preference number: 6 (lower is better)
Translates to: HVQNAAHQAVHL*VQALESVLHHL
Trigger: GAGGTGGTGCAGCACCGATTCGAGAGCCTGGACCAAGAGATGAACAGCCTGATGGGCCGCGTTCTGGACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CAA 72 bp CAGGCCCTCTGCAGCCTGCACGGCCACCTGCATCTTTaGCTGGCTCAGCTCCATGGTGGTGAGAAAGTCACG +
Preference number: 6 (lower is better)
Translates to: QALCSLHGHLHL*LAQLHGGEKVT
Trigger: CGTGACTTTCTCACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CAA 90 bp CTGCCTCAGCAGGCCCTCTGCAGCCTGCACGGCCACCTGCATCTTTaGCTGGCTCAGCTCCATGGTGGTGAGAAAGTCACGGTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: LPQQALCSLHGHLHL*LAQLHGGEKVTVLF
Trigger: AAACAGCACCGTGACTTTCTCACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGGCCGTGCAGGCTGCAGAGGGCCTGCTGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp TCTCCAGCTCACCCCATGCCTTGTCAATATCCCAGATaGCACAGCCCTCCCGAGGCACAAAGAGGCGACGGT +
Preference number: 6 (lower is better)
Translates to: SPAHPMPCQYPR*HSPPEAQRGDG
Trigger: ACCGTCGCCTCTTTGTGCCTCGGGAGGGCTGTGGCATCTGGGATATTGACAAGGCATGGGGTGAGCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS GCA 72 bp GGTTCTCCACCAGCAGCACCGCGCTCATTTCCTCTTTaGGCTGTTCCACTAGCTCCACGATGCGGTTCCACC +
Preference number: 6 (lower is better)
Translates to: GSPPAAPRSFPL*AVPLAPRCGST
Trigger: GGTGGAACCGCATCGTGGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCGCGGTGCTGCTGGTGGAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp ACAGTACAGGCTCACCCACGACCTGGAGCGACAAGATaGGGCTCAAGGCAGAGCCGCAGCACTCTGCCTAAT +
Preference number: 6 (lower is better)
Translates to: TVQAHPRPGATR*GSRQSRSTLPN
Trigger: ATTAGGCAGAGTGCTGCGGCTCTGCCTTGAGCCCCATCTTGTCGCTCCAGGTCGTGGGTGAGCCTGTACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595690.1
ENST00000596411.1
CDS CAA 90 bp TCCAGCACGTGGTTCTCCACCAGCAGCACCGCGCTCATTTCCTCTTaGCGCTGTTCCACTAGCTCCACGATGCGGTTCCACCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SSTWFSTSSTALISS*RCSTSSTMRFHLLL
Trigger: CAACAGCAGGTGGAACCGCATCGTGGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCGCGGTGCTGCTGGTGGAGAACCACGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp CAGTCCACCATGTACACCATCTCCTGGAAGACCTTCTaGAGGGCAAGGTTCTGCTCAAGTCGTGTCCGCCGG +
Preference number: 6 (lower is better)
Translates to: QSTMYTISWKTF*RARFCSSRVRR
Trigger: CCGGCGGACACGACTTGAGCAGAACCTTGCCCTGCAGAAGGTCTTCCAGGAGATGGTGTACATGGTGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS CAA 72 bp TGGTTCTCCACCAGCAGCACCGCGCTCATTTCCTCTTaGCGCTGTTCCACTAGCTCCACGATGCGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: WFSTSSTALISS*RCSTSSTMRFH
Trigger: GTGGAACCGCATCGTGGAGCTAGTGGAACAGCGCAAAGAGGAAATGAGCGCGGTGCTGCTGGTGGAGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS TCA 72 bp GGGCTTTCCCATTACAGCCCTGATAACTCTGGCCTGTaGGTGTCCCTTCTCACAGCCCCATCACTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: GLSHYSPDNSGL*VSLLTAPSLWV
Trigger: GACCCAGAGTGATGGGGCTGTGAGAAGGGACACTCACAGGCCAGAGTTATCAGGGCTGTAATGGGAAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593816.1
CDS GCA 72 bp TGCTGGCTCAGCTCCATGGTGGTGAGAAAGTCACGGTaGTGTTTCAAGGCCTCCTCCACCGATTCCACTGTG +
Preference number: 6 (lower is better)
Translates to: CWLSSMVVRKSR*CFKASSTDSTV
Trigger: CACAGTGGAATCGGTGGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCACCACCATGGAGCTGAGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS CCA 72 bp TCTGGGGGTTCCCAAGGAGGGTGCAGAAGAGCAGGATaGATAATGAGGCATTTCTCCAGCAGCCGGGTCACA +
Preference number: 6 (lower is better)
Translates to: SGGSQGGCRRAG*IMRHFSSSRVT
Trigger: TGTGACCCGGCTGCTGGAGAAATGCCTCATTATCCATCCTGCTCTTCTGCACCCTCCTTGGGAACCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS TCA 72 bp TGCTGCTGCACCCCACTTAAGGAGTTGGCAAATTTCTaGTTGCTGATGAGGCCCACGGTGCGGTGGATCCAG +
Preference number: 6 (lower is better)
Translates to: CCCTPLKELANF*LLMRPTVRWIQ
Trigger: CTGGATCCACCGCACCGTGGGCCTCATCAGCAATCAGAAATTTGCCAACTCCTTAAGTGGGGTGCAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
ENST00000598775.1
CDS TCA 72 bp CCACCTGCATCTTTTGCTGGCTCAGCTCCATGGTGGTaGGAAAGTCACGGTGCTGTTTCAAGGCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PPASFAGSAPWW*ESHGAVSRPPP
Trigger: TGGAGGAGGCCTTGAAACAGCACCGTGACTTTCTCACCACCATGGAGCTGAGCCAGCAAAAGATGCAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000597389.5
ENST00000598249.6
CDS GCA 72 bp TCTCCTCCTCATCTTTTGCCTGGAGCAAAAACTCACTaGCATCCTGGGTCCTGCAGGAAGGGACACAGGACT +
Preference number: 6 (lower is better)
Translates to: SPPHLLPGAKTH*HPGSCRKGHRT
Trigger: AGTCCTGTGTCCCTTCCTGCAGGACCCAGGATGGCAGTGAGTTTTTGCTCCAGGCAAAAGATGAGGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596411.1
CDS CCA 72 bp TTTTGCATCCATTGCTGGGCCCGTAACTGGTTTTCTTaGTTCCTGTGCCTGGCCTCTAGCTGCTGGATCTGG +
Preference number: 6 (lower is better)
Translates to: FCIHCWARNWFS*FLCLASSCWIW
Trigger: CCAGATCCAGCAGCTAGAGGCCAGGCACAGGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597389.5
CDS CCA 72 bp CCTGTATTAAATCCCCTCCACTTGACATACCTTGAGTaGGGTTGGACCCTGACCTGGCCCCCATGTGGCATA +
Preference number: 6 (lower is better)
Translates to: PVLNPLHLTYLE*GWTLTWPPCGI
Trigger: TATGCCACATGGGGGCCAGGTCAGGGTCCAACCCCACTCAAGGTATGTCAAGTGGAGGGGATTTAATACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS GCA 72 bp CAGAGGGAGGAAAGGACCAGATCTCACCTCATCTTTTaGCTGGAGCAAAAACTCACTGCCATCCTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: QREERTRSHLIF*LEQKLTAILGL
Trigger: CAGACCCAGGATGGCAGTGAGTTTTTGCTCCAGGCAAAAGATGAGGTGAGATCTGGTCCTTTCCTCCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593816.1
CDS GCA 72 bp CCAATCTCCAGAAGTGGCTGGGATGAGTTCAGTGAGTaGTTGGCCCAGAGACTGGTAGAGAAATGCTCAATG +
Preference number: 6 (lower is better)
Translates to: PISRSGWDEFSE*LAQRLVEKCSM
Trigger: CATTGAGCATTTCTCTACCAGTCTCTGGGCCAAGCACTCACTGAACTCATCCCAGCCACTTCTGGAGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS CCA 72 bp TCATGTAGCTTTTGCATCCATTGCTGGGCCCGTAACTaGTTTTCTTGGTTCTTCTCCAGCAGCCGGGTCACA +
Preference number: 6 (lower is better)
Translates to: SCSFCIHCWARN*FSWFFSSSRVT
Trigger: TGTGACCCGGCTGCTGGAGAAGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS CCA 72 bp TCATCTTTTGCCTGGAGCAAAAACTCACTGCCATCCTaGGTCCTGCAGGAAGGGACACAGGACTTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: SSFAWSKNSLPS*VLQEGTQDFRD
Trigger: ATCTCTGAAGTCCTGTGTCCCTTCCTGCAGGACCCAGGATGGCAGTGAGTTTTTGCTCCAGGCAAAAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596411.1
CDS CAA 72 bp TTTCTGTCCTCCCAGACACTGAGTAGAAAGAGCCCCTaGCCTGTCCTGAGTAAATTCTTCTCTACCCCAGTC +
Preference number: 6 (lower is better)
Translates to: FLSSQTLSRKSP*PVLSKFFSTPV
Trigger: GACTGGGGTAGAGAAGAATTTACTCAGGACAGGCAAGGGGCTCTTTCTACTCAGTGTCTGGGAGGACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596900.5
CDS GCA 72 bp TGCAGCTCAAGTTGGTCATGTAGCTTTTGCATCCATTaGTGGGCCCGTAACTGGTTTTCTTGGTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: CSSSWSCSFCIH*WARNWFSWFFS
Trigger: GGAGAAGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS CCA 72 bp AGCTCAAGTTGGTCATGTAGCTTTTGCATCCATTGCTaGGCCCGTAACTGGTTTTCTTGGTTCTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSSWSCSFCIHC*ARNWFSWFFSS
Trigger: GCTGGAGAAGAACCAAGAAAACCAGTTACGGGCCCAGCAATGGATGCAAAAGCTACATGACCAACTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338932.7
ENST00000352632.7
ENST00000392025.5
ENST00000595535.5
ENST00000598249.6
CDS CCA 72 bp AACAGGATAATAACAGTACCAATCTCCAGAAGTGGCTaGGATGAGTTCAGTGAGTGCTTGGCCCAGAGACTG +
Preference number: 6 (lower is better)
Translates to: NRIITVPISRSG*DEFSECLAQRL
Trigger: CAGTCTCTGGGCCAAGCACTCACTGAACTCATCCCAGCCACTTCTGGAGATTGGTACTGTTATTATCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS CAA 72 bp ATCTCCAGAAGTGGCTGGGATGAGTTCAGTGAGTGCTaGGCCCAGAGACTGGTAGAGAAATGCTCAATGAAT +
Preference number: 6 (lower is better)
Translates to: ISRSGWDEFSEC*AQRLVEKCSMN
Trigger: ATTCATTGAGCATTTCTCTACCAGTCTCTGGGCCAAGCACTCACTGAACTCATCCCAGCCACTTCTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS CAA 90 bp ACAGTACCAATCTCCAGAAGTGGCTGGGATGAGTTCAGTGAGTGCTaGGCCCAGAGACTGGTAGAGAAATGCTCAATGAATGTCATTGTT +
Preference number: 6 (lower is better)
Translates to: TVPISRSGWDEFSEC*AQRLVEKCSMNVIV
Trigger: AACAATGACATTCATTGAGCATTTCTCTACCAGTCTCTGGGCCAAGCACTCACTGAACTCATCCCAGCCACTTCTGGAGATTGGTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS TCA 72 bp GACCTAAAATGCTCTTCCTTAAGGCTGTTGCTGCCCTaGGGGGAGCATTTAAGTCTCTCAGTATCAAGCCTT +
Preference number: 6 (lower is better)
Translates to: DLKCSSLRLLLP*GEHLSLSVSSL
Trigger: AAGGCTTGATACTGAGAGACTTAAATGCTCCCCTCAGGGCAGCAACAGCCTTAAGGAAGAGCATTTTAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595690.1
ENST00000596411.1
CDS TCA 72 bp AACTCTTCATTAACATCCTCAAGGTCTGAATATGTCTaGGCCTTCCTACCTCTGGACCTTTGCGCCCTAGTT +
Preference number: 6 (lower is better)
Translates to: NSSLTSSRSEYV*AFLPLDLCALV
Trigger: AACTAGGGCGCAAAGGTCCAGAGGTAGGAAGGCTCAGACATATTCAGACCTTGAGGATGTTAATGAAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595690.1
ENST00000596411.1
CDS CCA 72 bp CCTTCCTTTTCCCTTTGTACTCCATACCTTAGGGAGTaGTGGCTGCTTCCAACAGTTATTACTAGCTGGATT +
Preference number: 6 (lower is better)
Translates to: PSFSLCTPYLRE*WLLPTVITSWI
Trigger: AATCCAGCTAGTAATAACTGTTGGAAGCAGCCACCACTCCCTAAGGTATGGAGTACAAAGGGAAAAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS GCA 72 bp TTTCCCTTTGTACTCCATACCTTAGGGAGTGGTGGCTaGTTCCAACAGTTATTACTAGCTGGATTGCTTCAA +
Preference number: 6 (lower is better)
Translates to: FPFVLHTLGSGG*FQQLLLAGLLQ
Trigger: TTGAAGCAATCCAGCTAGTAATAACTGTTGGAAGCAGCCACCACTCCCTAAGGTATGGAGTACAAAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS GCA 72 bp TTCAGTGAGTGCTTGGCCCAGAGACTGGTAGAGAAATaGTCAATGAATGTCATTGTTATTCCATGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: FSECLAQRLVEK*SMNVIVIPCKA
Trigger: GGCTTTGCATGGAATAACAATGACATTCATTGAGCATTTCTCTACCAGTCTCTGGGCCAAGCACTCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593932.1
CDS CCA 72 bp GGAGCTTTCTCAAGGAAAGTCTATTGGTCTACTGTCTaGAATAAAGAATTCCTGTCTCTCCAGTCATCCAAA +
Preference number: 6 (lower is better)
Translates to: GAFSRKVYWSTV*NKEFLSLQSSK
Trigger: TTTGGATGACTGGAGAGACAGGAATTCTTTATTCCAGACAGTAGACCAATAGACTTTCCTTGAGAAAGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596411.1
CDS CAA 72 bp AGTGGTGGCTGCTTCCAACAGTTATTACTAGCTGGATaGCTTCAATATTCCCTTTCTCATCTTCTACAAGTT +
Preference number: 6 (lower is better)
Translates to: SGGCFQQLLLAG*LQYSLSHLLQV
Trigger: AACTTGTAGAAGATGAGAAAGGGAATATTGAAGCAATCCAGCTAGTAATAACTGTTGGAAGCAGCCACCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593932.1