RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPTB (Homo sapiens)

Ensembl gene IDs: ENSG00000070182

Ensembl transcript IDs: ENST00000342835.9, ENST00000389720.4, ENST00000389722.7, ENST00000542694.2, ENST00000553938.5, ENST00000556227.1, ENST00000644917.1

Found 1904 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATGAAGAACACCTCAGTGAGGACGTAGCCTGCTCTGCTGGGAGGTaGCTGCAGGGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGC +
Preference number: 1 (lower is better)
Translates to: HEEHLSEDVACSAGR*LQGCGEDGGRGCAS
Trigger: GCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCCCTGCAGCCACCTCCCAGCAGAGCAGGCTACGTCCTCACTGAGGTGTTCTTCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
3UTR GCA 90 bp GCCCCAGGGCCAGCCCCAGATTGCATGGTCTGTGCCCAACAGGGTTaGATTCCTCTGCAGCCGCCGCCTCCTCATTTCCTCCCTGAGCTT +
Preference number: 1 (lower is better)
Translates to: APGPAPDCMVCAQQG*IPLQPPPPHFLPEL
Trigger: AAGCTCAGGGAGGAAATGAGGAGGCGGCGGCTGCAGAGGAATGCAACCCTGTTGGGCACAGACCATGCAATCTGGGGCTGGCCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 90 bp CTTGCTCACCAGGGCGGGAACCTGGGGATGTCAGGCTCCATCGGATaGCGTCTTCCTTCCTGTGGCTCCTGCCTGCTGCAGTTGGTGTCA +
Preference number: 1 (lower is better)
Translates to: LAHQGGNLGMSGSIG*RLPSCGSCLLQLVS
Trigger: TGACACCAACTGCAGCAGGCAGGAGCCACAGGAAGGAAGACGTCATCCGATGGAGCCTGACATCCCCAGGTTCCCGCCCTGGTGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp GTGGAAGGGGGAGGGTGGGCCCTTGTCCCTAGGCTCCCTAAAGACTaGCCCAGGGAAACAGTTGAGGGAGATGTTTGCCACCATCTGCCC +
Preference number: 1 (lower is better)
Translates to: VEGGGWALVPRLPKD*PRETVEGDVCHHLP
Trigger: GGGCAGATGGTGGCAAACATCTCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCACCCTCCCCCTTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 90 bp ACAGGGTTGCATTCCTCTGCAGCCGCCGCCTCCTCATTTCCTCCCTaGGCTTGTTTGTCCAAGCCACCAAGCCATGTGGTCCCGCTGGCT +
Preference number: 1 (lower is better)
Translates to: TGLHSSAAAASSFPP*ACLSKPPSHVVPLA
Trigger: AGCCAGCGGGACCACATGGCTTGGTGGCTTGGACAAACAAGCTCAGGGAGGAAATGAGGAGGCGGCGGCTGCAGAGGAATGCAACCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp CACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTaGCCCCCTCCCATGAAGGGAGGAAGAGGATTCAGGGTCAGCCTA +
Preference number: 1 (lower is better)
Translates to: HQAMWSRWLHPPLDS*PPPMKGGRGFRVSL
Trigger: TAGGCTGACCCTGAATCCTCTTCCTCCCTTCATGGGAGGGGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 90 bp GTTGGTGTCACCCTGACATATAGTGTCAGGGCCACAGGGTGGAACTaGTTTCTGCCGGCACTGGTCAGCACTCAGGGTTCCTCAGGGGGC +
Preference number: 1 (lower is better)
Translates to: VGVTLTYSVRATGWN*FLPALVSTQGSSGG
Trigger: GCCCCCTGAGGAACCCTGAGTGCTGACCAGTGCCGGCAGAAATCAGTTCCACCCTGTGGCCCTGACACTATATGTCAGGGTGACACCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 90 bp AGAAAAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTaGGCAGGTGGAGGACAGGACCCAGCTGGCCCCAGGGCCAGCCCC +
Preference number: 1 (lower is better)
Translates to: RKTSKWVSSGWWKHG*AGGGQDPAGPRASP
Trigger: GGGGCTGGCCCTGGGGCCAGCTGGGTCCTGTCCTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp CTGGTCAGCACTCAGGGTTCCTCAGGGGGCCTCATTCTGGATGCCTaGCCCTGTGGCTTCTACCTGAACCTCACCCACTTCATCTCCATG +
Preference number: 1 (lower is better)
Translates to: LVSTQGSSGGLILDA*PCGFYLNLTHFISM
Trigger: CATGGAGATGAAGTGGGTGAGGTTCAGGTAGAAGCCACAGGGGCAGGCATCCAGAATGAGGCCCCCTGAGGAACCCTGAGTGCTGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp TCTGTGGAGTTGCTTGCTGGAAATGCCTCACTTCAGGTGCTGATTTaGCACACGTGGAAGGGGGAGGGTGGGCCCTTGTCCCTAGGCTCC +
Preference number: 1 (lower is better)
Translates to: SVELLAGNASLQVLI*HTWKGEGGPLSLGS
Trigger: GGAGCCTAGGGACAAGGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp CTAGTTGGTCGAATGTCTTGGAGCCTGGGTGACAGGAGGGATGTGTaGGGAGCTGGCAACAGAATGGTCACATGCAGCTGGCTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: LVGRMSWSLGDRRDV*GAGNRMVTCSWLPW
Trigger: CCAGGGCAGCCAGCTGCATGTGACCATTCTGTTGCCAGCTCCCCACACATCCCTCCTGTCACCCAGGCTCCAAGACATTCGACCAACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 90 bp CGTCTTCCTTCCTGTGGCTCCTGCCTGCTGCAGTTGGTGTCACCCTaGCATATAGTGTCAGGGCCACAGGGTGGAACTGATTTCTGCCGG +
Preference number: 1 (lower is better)
Translates to: RLPSCGSCLLQLVSP*HIVSGPQGGTDFCR
Trigger: CCGGCAGAAATCAGTTCCACCCTGTGGCCCTGACACTATATGTCAGGGTGACACCAACTGCAGCAGGCAGGAGCCACAGGAAGGAAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp CTTTCCCTGGCTGCCACCAGGTGGGAGGTGACCCGAAGCAAGACTTaGTTTAGGAACGGGCAGCGTTTGAAGAACCCCATCAGCCTTCTC +
Preference number: 1 (lower is better)
Translates to: LSLAATRWEVTRSKT*FRNGQRLKNPISLL
Trigger: GAGAAGGCTGATGGGGTTCTTCAAACGCTGCCCGTTCCTAAAGCAAGTCTTGCTTCGGGTCACCTCCCACCTGGTGGCAGCCAGGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATaGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGGTGGCACA +
Preference number: 1 (lower is better)
Translates to: FRSEPCALATVFNEE*SDLAALPGTACGGT
Trigger: TGTGCCACCACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp CATATAGTGTCAGGGCCACAGGGTGGAACTGATTTCTGCCGGCACTaGTCAGCACTCAGGGTTCCTCAGGGGGCCTCATTCTGGATGCCT +
Preference number: 1 (lower is better)
Translates to: HIVSGPQGGTDFCRH*SALRVPQGASFWMP
Trigger: AGGCATCCAGAATGAGGCCCCCTGAGGAACCCTGAGTGCTGACCAGTGCCGGCAGAAATCAGTTCCACCCTGTGGCCCTGACACTATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp AAGACTGGCCCAGGGAAACAGTTGAGGGAGATGTTTGCCACCATCTaGCCTTCAGCAAGGAACCTGCTCTCTGCCCCAGAGGAGGACATG +
Preference number: 1 (lower is better)
Translates to: KTGPGKQLREMFATI*PSARNLLSAPEEDM
Trigger: CATGTCCTCCTCTGGGGCAGAGAGCAGGTTCCTTGCTGAAGGGCAGATGGTGGCAAACATCTCCCTCAACTGTTTCCCTGGGCCAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp CTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATaGCTCACTTCAGGTGCTGATTTGGCACACGTGGAAGGGGGAGGG +
Preference number: 1 (lower is better)
Translates to: LEPFLSRVCGVACWK*LTSGADLAHVEGGG
Trigger: CCCTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp CAGCAAGGGGAAGGCCATTCCTGGGGACGTTGGTTGCAGAGCTTCTaGTGCTCAGGGCTGGAGGGTGGTAGATATTTGACCTCTGTACTC +
Preference number: 1 (lower is better)
Translates to: QQGEGHSWGRWLQSF*CSGLEGGRYLTSVL
Trigger: GAGTACAGAGGTCAAATATCTACCACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAACCAACGTCCCCAGGAATGGCCTTCCCCTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp CACTCAGGGTTCCTCAGGGGGCCTCATTCTGGATGCCTGCCCCTGTaGCTTCTACCTGAACCTCACCCACTTCATCTCCATGGAACTAAG +
Preference number: 1 (lower is better)
Translates to: HSGFLRGPHSGCLPL*LLPEPHPLHLHGTK
Trigger: CTTAGTTCCATGGAGATGAAGTGGGTGAGGTTCAGGTAGAAGCCACAGGGGCAGGCATCCAGAATGAGGCCCCCTGAGGAACCCTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp GAACCTGGGGATGTCAGGCTCCATCGGATGACGTCTTCCTTCCTGTaGCTCCTGCCTGCTGCAGTTGGTGTCACCCTGACATATAGTGTC +
Preference number: 1 (lower is better)
Translates to: EPGDVRLHRMTSSFL*LLPAAVGVTLTYSV
Trigger: GACACTATATGTCAGGGTGACACCAACTGCAGCAGGCAGGAGCCACAGGAAGGAAGACGTCATCCGATGGAGCCTGACATCCCCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp TTGCTTGCTGGAAATGCCTCACTTCAGGTGCTGATTTGGCACACGTaGAAGGGGGAGGGTGGGCCCTTGTCCCTAGGCTCCCTAAAGACT +
Preference number: 1 (lower is better)
Translates to: LLAGNASLQVLIWHT*KGEGGPLSLGSLKT
Trigger: AGTCTTTAGGGAGCCTAGGGACAAGGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp GAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCAAAGCTGGATaGCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTGGAGCCTGGG +
Preference number: 1 (lower is better)
Translates to: ELSPGVAHTGSPKAG*LHFQSSWSNVLEPG
Trigger: CCCAGGCTCCAAGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp TCTGGCCCTGACATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATaGGTGGTGATACCAAGACATGGCTGCGTCTGCCACCCCGAGAAA +
Preference number: 1 (lower is better)
Translates to: SGPDICPSCAGVAVT*VVIPRHGCVCHPEK
Trigger: TTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATGTCAGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp ATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTaGGGATGTCAGGCTCCATCGGATGACGTCTTCCTTCCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: MYQSQMKTLLTRAGT*GCQAPSDDVFLPVA
Trigger: AGCCACAGGAAGGAAGACGTCATCCGATGGAGCCTGACATCCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp CTTGCCCAGAAGGAGCTTCCTCTAAACTGCCCTGGGAAGGAAGCCTaGTATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAA +
Preference number: 1 (lower is better)
Translates to: LAQKELPLNCPGKEA*YAGVDWSCVNLVWE
Trigger: TTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCATACCAGGCTTCCTTCCCAGGGCAGTTTAGAGGAAGCTCCTTCTGGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp GCTGCGTCTGCCACCCCGAGAAAACAGATGATCAACTTTACTGTCTaGCCAGCCATTACCCTCCAAAGTCCCAGCTGCAGACAGGATGCA +
Preference number: 1 (lower is better)
Translates to: AASATPRKQMINFTV*PAITLQSPSCRQDA
Trigger: TGCATCCTGTCTGCAGCTGGGACTTTGGAGGGTAATGGCTGGGCAGACAGTAAAGTTGATCATCTGTTTTCTCGGGGTGGCAGACGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp TTAGCCCTGGTGTGGCACACACAGGGTCTCCCAAAGCTGGATGCCTaGATTTTCAGTCTAGTTGGTCGAATGTCTTGGAGCCTGGGTGAC +
Preference number: 1 (lower is better)
Translates to: LALVWHTQGLPKLDA*IFSLVGRMSWSLGD
Trigger: GTCACCCAGGCTCCAAGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTGTGTGTGCCACACCAGGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp CCAGAAGGAGCTTCCTCTAAACTGCCCTGGGAAGGAAGCCTGGTATaGTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTG +
Preference number: 1 (lower is better)
Translates to: PEGASSKLPWEGSLV*WCGLELCQPRLGIL
Trigger: CAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCATACCAGGCTTCCTTCCCAGGGCAGTTTAGAGGAAGCTCCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp GGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGCTGCGTCTaGCACCCCGAGAAAACAGATGATCAACTTTACTGTCTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: GVAVTWVVIPRHGCV*HPEKTDDQLYCLPS
Trigger: GCTGGGCAGACAGTAAAGTTGATCATCTGTTTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACCACCCATGTGACAGCTACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp GCTCTTCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTaGTGGAAATGCCTCACTTCAGGTGCTGATTTGGCACACGTGGAA +
Preference number: 1 (lower is better)
Translates to: ALPLEPFLSRVCGVA*WKCLTSGADLAHVE
Trigger: TTCCACGTGTGCCAAATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp GAAGGAGCTTCCTCTAAACTGCCCTGGGAAGGAAGCCTGGTATGCTaGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCA +
Preference number: 1 (lower is better)
Translates to: EGASSKLPWEGSLVC*CGLELCQPRLGILS
Trigger: TGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCATACCAGGCTTCCTTCCCAGGGCAGTTTAGAGGAAGCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 90 bp GGTGATACCAAGACATGGCTGCGTCTGCCACCCCGAGAAAACAGATaGTCAACTTTACTGTCTGCCCAGCCATTACCCTCCAAAGTCCCA +
Preference number: 1 (lower is better)
Translates to: GDTKTWLRLPPRENR*STLLSAQPLPSKVP
Trigger: TGGGACTTTGGAGGGTAATGGCTGGGCAGACAGTAAAGTTGATCATCTGTTTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 90 bp TACACACTAGGTTCCCTGTATAGGGTCATATGTACCAAAGCCAAATaGAGACCTTGCTCACCAGGGCGGGAACCTGGGGATGTCAGGCTC +
Preference number: 1 (lower is better)
Translates to: YTLGSLYRVICTKAK*RPCSPGREPGDVRL
Trigger: GAGCCTGACATCCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGACCCTATACAGGGAACCTAGTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp TGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGCTaGGTCTGCCACCCCGAGAAAACAGATGATCAACTTTACTGTCTG +
Preference number: 1 (lower is better)
Translates to: CAGVAVTWVVIPRHG*VCHPEKTDDQLYCL
Trigger: CAGACAGTAAAGTTGATCATCTGTTTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 90 bp ACATGCCTGCAAGTGCACCAAAGGCCTACTTTATTGCTAGGTGAGTaGAGTCACCTCACTGCCTTGGTTTCCCCAGATACAGAAAGAGGC +
Preference number: 1 (lower is better)
Translates to: TCLQVHQRPTLLLGE*SHLTALVSPDTERG
Trigger: GCCTCTTTCTGTATCTGGGGAAACCAAGGCAGTGAGGTGACTGCACTCACCTAGCAATAAAGTAGGCCTTTGGTGCACTTGCAGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 90 bp ACCTCACTGCCTTGGTTTCCCCAGATACAGAAAGAGGCTGGTGAGTaGTACACACTAGGTTCCCTGTATAGGGTCATATGTACCAAAGCC +
Preference number: 1 (lower is better)
Translates to: TSLPWFPQIQKEAGE*YTLGSLYRVICTKA
Trigger: GGCTTTGGTACATATGACCCTATACAGGGAACCTAGTGTGTATCACTCACCAGCCTCTTTCTGTATCTGGGGAAACCAAGGCAGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 90 bp AGTTTGATACTGGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTaGGGAAAATATGGAATGAGCTTTCTCTTCCTCCAGAAGTATGAC +
Preference number: 1 (lower is better)
Translates to: SLILGQNCVAFGVEW*GKYGMSFLFLQKYD
Trigger: GTCATACTTCTGGAGGAAGAGAAAGCTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCCAGTATCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGCCAAGGCCTGGGCTaGCCGGTCTCTGCGCGTCCC +
Preference number: 2 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVGQGLG*PVSARP
Trigger: GGGACGCGCAGAGACCGGGCAGCCCAGGCCTTGGCC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
3UTR-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGGCCAAGGCCTGGGCTaGCCGGTCTCTGCGCGTCCC +
Preference number: 2 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGGQGLG*PVSARP
Trigger: GGGACGCGCAGAGACCGGGCAGCCCAGGCCTTGGCC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
3UTR-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGAGGAGGCCAAGGCCTaGGCTGCCCGGTCTCTGCGC +
Preference number: 2 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGEEAKA*AARSLR
Trigger: GCGCAGAGACCGGGCAGCCCAGGCCTTGGCCTCCTC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
3UTR-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAGGCGCCAGAGGAGCTaGGAGCCCCTGTCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGRRQRS*EPLSLE
Trigger: CTCCAGGGACAGGGGCTCCCAGCTCCTCTGGCGCCT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
3UTR-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGCGAAGGCAGCTTTTaGAGTGCAGCGTGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGEGSF*SAAWGP
Trigger: CGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
3UTR-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGCTTTGTGGGCCACCTaGAGGCTCCTTCCTCATGCC +
Preference number: 2 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRALWAT*RLLPHA
Trigger: GGCATGAGGAAGGAGCCTTCAGGTGGCCCACAAAGC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGGACGTAGCCTGCTCTaGTGGGAGGTGGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEGRSLL*WEVAAG
Trigger: CCCTGCAGCCACCTCCCAGCAGAGCAGGCTACGTCC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
3UTR CAA 90 bp CCACACTGTCCCGTAGGGGGCCTATGTCTGTTGGATATTGCTGGTTaGGCTGCCACTGGGAGTGGGGCGAGGGTCCCAGCATTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PHCPVGGLCLLDIAG*AATGSGARVPALRG
Trigger: CCCTCTCAATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAACAGACATAGGCCCCCTACGGGACAGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCTGGTTGCAGAGCTTCTaGTGCTCAGGGCTGGAGGGT +
Preference number: 2 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPWLQSF*CSGLEG
Trigger: ACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAACCA...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACAGGGGGCCTCATTCTaGATGCCTGCCCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: WALVPRLPKDWPRETVEGQGASF*MPAPVA
Trigger: AGCCACAGGGGCAGGCATCCAGAATGAGGCCCCCTG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 90 bp ATTGCTGGTTTGGCTGCCACTGGGAGTGGGGCGAGGGTCCCAGCATaGAGAGGGAGAGCCTTAGGCAGTGTTGTGACGCACCTGTCACTC +
Preference number: 2 (lower is better)
Translates to: IAGLAATGSGARVPA*RGRALGSVVTHLSL
Trigger: GAGTGACAGGTGCGTCACAACACTGCCTAAGGCTCTCCCTCTCAATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCCAAACCAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 90 bp CTTCAGGTGCTGATTTGGCACACGTGGAAGGGGGAGGGTGGGCCCTaGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGG +
Preference number: 2 (lower is better)
Translates to: LQVLIWHTWKGEGGP*SLGSLKTGPGKQLR
Trigger: CCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCTCATTCTGGATGCCTaGCCCTGTGGCTTCTACCTG +
Preference number: 2 (lower is better)
Translates to: LARALGELSPGVAHTGSPLILDA*PCGFYL
Trigger: CAGGTAGAAGCCACAGGGGCAGGCATCCAGAATGAG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACCTGTGGCTCCTGCCTaGTGCAGTTGGTGTCACCCT +
Preference number: 2 (lower is better)
Translates to: WALVPRLPKDWPRETVEGPVAPA*CSWCHP
Trigger: AGGGTGACACCAACTGCAGCAGGCAGGAGCCACAGG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGAGCTGGCAACAGAATaGTCACATGCAGCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: LARALGELSPGVAHTGSPELATE*SHAAGC
Trigger: GCAGCCAGCTGCATGTGACCATTCTGTTGCCAGCTC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 90 bp GTTGCATTCCTCTGCAGCCGCCGCCTCCTCATTTCCTCCCTGAGCTaGTTTGTCCAAGCCACCAAGCCATGTGGTCCCGCTGGCTTCATC +
Preference number: 2 (lower is better)
Translates to: VAFLCSRRLLISSLS*FVQATKPCGPAGFI
Trigger: GATGAAGCCAGCGGGACCACATGGCTTGGTGGCTTGGACAAACAAGCTCAGGGAGGAAATGAGGAGGCGGCGGCTGCAGAGGAATGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGGCGAAGGCAGCTTTTaGAGTGCAGCGTGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: STRALPFSGLWSCLLEMPGEGSF*SAAWGP
Trigger: CGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCATACCAAGACATGGCTaGGTCTGCCACCCCGAGAAA +
Preference number: 2 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPIPRHG*VCHPEK
Trigger: TTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTAT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTCCTGCCCCCAGGCCTaGAGGCCCCAAAGGCGCCAG +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTSCPQA*RPQRRQ
Trigger: CTGGCGCCTTTGGGGCCTCCAGGCCTGGGGGCAGGA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGGCTGCCACTGGGAGTaGGGCGAGGGTCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGGCHWE*GEGPSI
Trigger: AATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 90 bp GGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTaGAGGGAGATGTTTGCCACCATCTGCCCTTCAGCAAGGAACCTG +
Preference number: 2 (lower is better)
Translates to: GPLSLGSLKTGPGKQ*REMFATICPSARNL
Trigger: CAGGTTCCTTGCTGAAGGGCAGATGGTGGCAAACATCTCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTGTACCAAAGCCAAATaGAGACCTTGCTCACCAGGG +
Preference number: 2 (lower is better)
Translates to: LARALGELSPGVAHTGSPCTKAK*RPCSPG
Trigger: CCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCAGAGAACCGTTTCCTaGCCCCAGGCCTGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: FRSEPCALATVFNEEWSDQRTVS*PQAWRP
Trigger: GGGCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCACTCAGCCAGGCCCTaGCAACCGTGGGAGGGTACC +
Preference number: 2 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDHSARP*QPWEGT
Trigger: GGTACCCTCCCACGGTTGGCAGGGCCTGGCTGAGTG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACAGTGAGGACGTAGCCTaGTCTGCTGGGAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: VSSALWGGVEEASTLMKNSEDVA*SAGRWL
Trigger: CAGCCACCTCCCAGCAGAGCAGGCTACGTCCTCACT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
3UTR-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCTGGCTGCCACCAGGTaGGAGGTGACCCGAAGCAAG +
Preference number: 2 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGLAATR*EVTRSK
Trigger: CTTGCTTCGGGTCACCTCCCACCTGGTGGCAGCCAG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTCTGCGGAAGCCCAGTaGGAAGGAGGCTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: STRALPFSGLWSCLLEMPSAEAQ*EGGWQL
Trigger: GAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCTTTCATGGTTTCCTTaGGGGAAAATGCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPLSWFP*GKMPAA
Trigger: GGCAGCAGGCATTTTCCCCCAAGGAAACCATGAAAG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTGCAGCTGGCTGCCCTaGACCAGGCCAGGGGACCTG +
Preference number: 2 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSCSWLP*TRPGDL
Trigger: CAGGTCCCCTGGCCTGGTCCAGGGCAGCCAGCTGCA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 90 bp CCCACCCCCGACCCGCTTGACTGCTCTCTTGGACCTAACCCTAGTTaGATACTGGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: PTPDPLDCSLGPNPS*ILGQNCVAFGVEWW
Trigger: CCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCCAGTATCAAACTAGGGTTAGGTCCAAGAGAGCAGTCAAGCGGGTCGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTGGTGGCCCCTGAAGTaGGAGTCCCAGTTCTGCGGA +
Preference number: 2 (lower is better)
Translates to: STRALPFSGLWSCLLEMPWWPLK*ESQFCG
Trigger: TCCGCAGAACTGGGACTCTCACTTCAGGGGCCACCA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGCGAAGGCAGCTTTTaGAGTGCAGCGTGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGEGSF*SAAWGP
Trigger: CGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCACTCAGCCAGGCCCTaGCAACCGTGGGAGGGTACC +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTHSARP*QPWEGT
Trigger: GGTACCCTCCCACGGTTGGCAGGGCCTGGCTGAGTG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCATTTGTCCCAGTTGTaGAGGAGTAGCTGTCACATG +
Preference number: 2 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPHLSQL*RSSCHM
Trigger: CATGTGACAGCTACTCCTGCACAACTGGGACAAATG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGGACATGCCTGCAAGTaGACCAAAGGCCTACTTTAT +
Preference number: 2 (lower is better)
Translates to: LARALGELSPGVAHTGSPGHACK*TKGLLY
Trigger: ATAAAGTAGGCCTTTGGTGCACTTGCAGGCATGTCC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAAGGCGCCAGAGGAGCTaGGAGCCCCTGTCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRRRQRS*EPLSLE
Trigger: CTCCAGGGACAGGGGCTCCCAGCTCCTCTGGCGCCT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTATGCCCCTAGGGGGCTaGCCATGCATTTCCAGTGTC +
Preference number: 2 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIMPLGG*PCISSV
Trigger: GACACTGGAAATGCATGGCCAGCCCCCTAGGGGCAT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCCTTGCTGCCCTTCCTaGGACCGCCTGTGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTPCCPS*DRLWWH
Trigger: GTGCCACCACAGGCGGTCCCAGGAAGGGCAGCAAGG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGGCTGCCACTGGGAGTaGGGCGAGGGTCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTGCHWE*GEGPSI
Trigger: AATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACTTGACTGCAGGCCCTaGGGACTTTCATGGTTTCCT +
Preference number: 2 (lower is better)
Translates to: WALVPRLPKDWPRETVEGLDCRP*GLSWFP
Trigger: AGGAAACCATGAAAGTCCCCAGGGCCTGCAGTCAAG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCCACCAGGTGGGAGGTaGCCCGAAGCAAGACTTGCT +
Preference number: 2 (lower is better)
Translates to: FRSEPCALATVFNEEWSDPPGGR*PEARLA
Trigger: AGCAAGTCTTGCTTCGGGTCACCTCCCACCTGGTGG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGGAGAGGAGGGCGTGTaGCTCAGAGAACCGTTTCCT +
Preference number: 2 (lower is better)
Translates to: STRALPFSGLWSCLLEMPGEEGV*LREPFP
Trigger: AGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCCTGGGGACGTTGGTTaGAGAGCTTCTGGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGPGDVG*RASGAQ
Trigger: CTGAGCACCAGAAGCTCTGCAACCAACGTCCCCAGG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATTGGGGGAAAATGCCTaGTGCCCTCCGCCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRLGENA*CPPPSP
Trigger: GGGGGAGGGCGGAGGGCAGCAGGCATTTTCCCCCAA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGTTTTCAATGAGGAATaGTCTGACCTTGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPVFNEE*SDLAAL
Trigger: AAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAAC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTGGTTTGGCTGCCACTaGGAGTGGGGCGAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHWFGCH*EWGEGP
Trigger: GGGACCCTCGCCCCACTCCCAGTGGCAGCCAAACCA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTGGATATTGCTGGTTTaGCTGCCACTGGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIWILLV*LPLGVG
Trigger: CCCCACTCCCAGTGGCAGCCAAACCAGCAATATCCA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGCTTTGTGGGCCACCTaGAGGCTCCTTCCTCATGCC +
Preference number: 2 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSALWAT*RLLPHA
Trigger: GGCATGAGGAAGGAGCCTTCAGGTGGCCCACAAAGC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTGGTGGCCCCTGAAGTaGGAGTCCCAGTTCTGCGGA +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEWWPLK*ESQFCG
Trigger: TCCGCAGAACTGGGACTCTCACTTCAGGGGCCACCA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCTGTCACATGGGTGGTaGTACCAAGACATGGCTGCG +
Preference number: 2 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGLSHGW*YQDMAA
Trigger: CGCAGCCATGTCTTGGTATCACCACCCATGTGACAG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGGGACCTGGGGTGGTaGGATGCTAGCTCTTCCACT +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTGDLGW*DASSST
Trigger: AGTGGAAGAGCTAGCATCTCACCACCCCAGGTCCCC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGGGGACCTGGGGTGGTaGGATGCTAGCTCTTCCACT +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEGDLGW*DASSST
Trigger: AGTGGAAGAGCTAGCATCTCACCACCCCAGGTCCCC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGGTGGAACTGATTTCTaGCGGCACTGGTCAGCACTC +
Preference number: 2 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGGGTDF*RHWSAL
Trigger: GAGTGCTGACCAGTGCCGGCAGAAATCAGTTCCACC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACATGCCCCTAGGGGGCTaGCCATGCATTTCCAGTGTC +
Preference number: 2 (lower is better)
Translates to: FRSEPCALATVFNEEWSDMPLGG*PCISSV
Trigger: GACACTGGAAATGCATGGCCAGCCCCCTAGGGGCAT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGGATGTGGTGGCCCCTaGAGTGAGAGTCCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEGCGGP*SESPSS
Trigger: AGAACTGGGACTCTCACTTCAGGGGCCACCACATCC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGATGTGGTGGCCCCTaGAGTGAGAGTCCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGCGGP*SESPSS
Trigger: AGAACTGGGACTCTCACTTCAGGGGCCACCACATCC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCAGTTGGTGTCACCCTaGCATATAGTGTCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGQLVSP*HIVSGP
Trigger: TGGCCCTGACACTATATGTCAGGGTGACACCAACTG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTAGACATGGCTGCGTCTaGCACCCCGAGAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: STRALPFSGLWSCLLEMPRHGCV*HPEKTD
Trigger: ATCTGTTTTCTCGGGGTGGCAGACGCAGCCATGTCT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGGTGATACCAAGACATaGCTGCGTCTGCCACCCCGA +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEGDTKT*LRLPPR
Trigger: TCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGTGATACCAAGACATaGCTGCGTCTGCCACCCCGA +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTGDTKT*LRLPPR
Trigger: TCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTACCTTGCTAGGGCACTaGGAGAGCTTAGCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTTLLGH*ESLALV
Trigger: CACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAGGT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTCCAGAAGTATGACCTaGGCAGCAAGGGGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSRSMT*AARGRP
Trigger: TGGCCTTCCCCTTGCTGCTCAGGTCATACTTCTGGA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGACCTAACCCTAGTTTaGTACTGGGCCAGAACTGTG +
Preference number: 2 (lower is better)
Translates to: STRALPFSGLWSCLLEMPDLTLV*YWARTV
Trigger: CACAGTTCTGGCCCAGTATCAAACTAGGGTTAGGTC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATATTGCTGGTTTGGCTaGCACTGGGAGTGGGGCGAG +
Preference number: 2 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRYCWFG*HWEWGE
Trigger: CTCGCCCCACTCCCAGTGGCAGCCAAACCAGCAATA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATTGCAGAGCTTCTGGTaGTCAGGGCTGGAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRLQSFW*SGLEGG
Trigger: ACCACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGATATTGCTGGTTTaGCTGCCACTGGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTWILLV*LPLGVG
Trigger: CCCCACTCCCAGTGGCAGCCAAACCAGCAATATCCA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCATTCCTGGGGACGTTaGTTGCAGAGCTTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTHSWGR*LQSFWC
Trigger: GCACCAGAAGCTCTGCAACCAACGTCCCCAGGAATG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCTTCCTCCAGAAGTATaGCCTGAGCAGCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTLPPEV*PEQQGE
Trigger: TTCCCCTTGCTGCTCAGGTCATACTTCTGGAGGAAG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCCTGTGGCTTCTACCTaGACCTCACCCACTTCATCT +
Preference number: 2 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSPVAST*TSPTSS
Trigger: AGATGAAGTGGGTGAGGTTCAGGTAGAAGCCACAGG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTACCCGAAGCAAGACTTaGTTTAGGAACGGGCAGCGT +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTTRSKT*FRNGQR
Trigger: ACGCTGCCCGTTCCTAAAGCAAGTCTTGCTTCGGGT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCAGATCAGAGCCCTGTaGCCTAGCCACGGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEQIRAL*PSHGFQ
Trigger: TTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCATTTGGCTTTGGGATaGTTTACTGCAGGTGCGGGG +
Preference number: 2 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEHLALG*FTAGAG
Trigger: CCCCGCACCTGCAGTAAAGCATCCCAAAGCCAAATG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTATCAACTTTACTGTCTaGCCAGCCATTACCCTCCAA +
Preference number: 2 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIINFTV*PAITLQ
Trigger: TTGGAGGGTAATGGCTGGGCAGACAGTAAAGTTGAT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGAGACATGGCTGCGTCTaGCACCCCGAGAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVERHGCV*HPEKTD
Trigger: ATCTGTTTTCTCGGGGTGGCAGACGCAGCCATGTCT...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTATACCAAGACATGGCTaGGTCTGCCACCCCGAGAAA +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTIPRHG*VCHPEK
Trigger: TTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTAT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTAGAGGAGGACATGCCTaGAAGTGCACCAAAGGCCTA +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTRGGHA*KCTKGL
Trigger: TAGGCCTTTGGTGCACTTGCAGGCATGTCCTCCTCT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGAGAGGAGGACATGCCTaGAAGTGCACCAAAGGCCTA +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVERGGHA*KCTKGL
Trigger: TAGGCCTTTGGTGCACTTGCAGGCATGTCCTCCTCT...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTCGGGTCTGTGGAGTTaGTTGCTGGAAATGCCTCAC +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTSGLWS*LLEMPH
Trigger: GTGAGGCATTTCCAGCAAGCAACTCCACAGACCCGA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTCCTCATTTCCTCCCTaGGCTTGTTTGTCCAAGCCA +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVESSFPP*ACLSKP
Trigger: TGGCTTGGACAAACAAGCTCAGGGAGGAAATGAGGA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCTCCAAAGTCCCAGCTaGAGACAGGATGCAATTGAG +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVELQSPS*RQDAIE
Trigger: CTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGATCAACTTTACTGTCTaGCCAGCCATTACCCTCCAA +
Preference number: 2 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGINFTV*PAITLQ
Trigger: TTGGAGGGTAATGGCTGGGCAGACAGTAAAGTTGAT...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGCTTTCGGAGTAGAGTaGTGGGGAAAATATGGAATG +
Preference number: 2 (lower is better)
Translates to: STRALPFSGLWSCLLEMPAFGVE*WGKYGM
Trigger: CATTCCATATTTTCCCCACCACTCTACTCCGAAAGC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCCTTTCTCGGGTCTGTaGAGTTGCTTGCTGGAAATG +
Preference number: 2 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSPFSGL*SCLLEM
Trigger: CATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGTGGCTGCAGGGATGTaGGGAGGATGGAGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFVAAGM*GGWRAG
Trigger: CCCCGCCCTCCATCCTCCCCACATCCCTGCAGCCAC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
3UTR-3UTR TCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCAGACAGGATGCAATTaGGCATTTGGCTTTGGGATG +
Preference number: 2 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHQTGCN*AFGFGM
Trigger: CATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTG...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGTTTTCAATGAGGAATaGTCTGACCTTGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSVFNEE*SDLAAL
Trigger: AAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAAC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGCTTTCGGAGTAGAGTaGTGGGGAAAATATGGAATG +
Preference number: 2 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTAFGVE*WGKYGM
Trigger: CATTCCATATTTTCCCCACCACTCTACTCCGAAAGC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATTCGGAGTAGAGTGGTaGGGAAAATATGGAATGAGC +
Preference number: 2 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRFGVEW*GKYGMS
Trigger: GCTCATTCCATATTTTCCCCACCACTCTACTCCGAA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCATTTTCAGTCTAGTTaGTCGAATGTCTTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEHFQSS*SNVLEP
Trigger: AGGCTCCAAGACATTCGACCAACTAGACTGAAAATG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGGCGAAGGCAGCTTTaGCAGTGCAGCGTGGGGCCC +
Preference number: 3 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGRRQL*QCSVGP
Trigger: GGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
3UTR CCA 72 bp CGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTaGAGGCCCCAAAGGCGCCAGAGGAGCTGGGAGCCC +
Preference number: 3 (lower is better)
Translates to: RVPQRTVSCPQA*RPQRRQRSWEP
Trigger: GGGCTCCCAGCTCCTCTGGCGCCTTTGGGGCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
3UTR CCA 72 bp GGGAGGAAGAGGATTCAGGGTCAGCCTAGGGGACCCTaGCTCCCTCCGATAGGCAGGAAGGAGGAGGGATGC +
Preference number: 3 (lower is better)
Translates to: GRKRIQGQPRGP*LPPIGRKEEGC
Trigger: GCATCCCTCCTCCTTCCTGCCTATCGGAGGGAGCCAGGGTCCCCTAGGCTGACCCTGAATCCTCTTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCCACCCCCGACCCGCTaGACTGCTCTCTTGGACCTA +
Preference number: 3 (lower is better)
Translates to: LARALGELSPGVAHTGSPPPPTR*TALLDL
Trigger: TAGGTCCAAGAGAGCAGTCAAGCGGGTCGGGGGTGG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCCATTCCTGGGGACGTaGGTTGCAGAGCTTCTGGTG +
Preference number: 3 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPPFLGT*VAELLV
Trigger: CACCAGAAGCTCTGCAACCAACGTCCCCAGGAATGG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp AGCAGCAAGGGGAAGGCCATTCCTGGGGACGTTGGTTaGAGAGCTTCTGGTGCTCAGGGCTGGAGGGTGGTA +
Preference number: 3 (lower is better)
Translates to: SSKGKAIPGDVG*RASGAQGWRVV
Trigger: TACCACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAACCAACGTCCCCAGGAATGGCCTTCCCCTTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp CAGCACTCAGGGTTCCTCAGGGGGCCTCATTCTGGATaGCTGCCCCTGTGGCTTCTACCTGAACCTCACCCA +
Preference number: 3 (lower is better)
Translates to: QHSGFLRGPHSG*LPLWLLPEPHP
Trigger: TGGGTGAGGTTCAGGTAGAAGCCACAGGGGCAGGCATCCAGAATGAGGCCCCCTGAGGAACCCTGAGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp CCAGCCCCAGATTGCATGGTCTGTGCCCAACAGGGTTaGATTCCTCTGCAGCCGCCGCCTCCTCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: PAPDCMVCAQQG*IPLQPPPPHFL
Trigger: GAGGAAATGAGGAGGCGGCGGCTGCAGAGGAATGCAACCCTGTTGGGCACAGACCATGCAATCTGGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp TCAGGGCCACAGGGTGGAACTGATTTCTGCCGGCACTaGTCAGCACTCAGGGTTCCTCAGGGGGCCTCATTC +
Preference number: 3 (lower is better)
Translates to: SGPQGGTDFCRH*SALRVPQGASF
Trigger: GAATGAGGCCCCCTGAGGAACCCTGAGTGCTGACCAGTGCCGGCAGAAATCAGTTCCACCCTGTGGCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp GGAAATGCCTCACTTCAGGTGCTGATTTGGCACACGTaGAAGGGGGAGGGTGGGCCCTTGTCCCTAGGCTCC +
Preference number: 3 (lower is better)
Translates to: GNASLQVLIWHT*KGEGGPLSLGS
Trigger: GGAGCCTAGGGACAAGGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAGTGAGGCATTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGGGCGAAGGCAGCTTTaGCAGTGCAGCGTGGGGCCC +
Preference number: 3 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGGRRQL*QCSVGP
Trigger: GGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp AGGGGGCCTATGTCTGTTGGATATTGCTGGTTTGGCTaGCACTGGGAGTGGGGCGAGGGTCCCAGCATTGAG +
Preference number: 3 (lower is better)
Translates to: RGPMSVGYCWFG*HWEWGEGPSIE
Trigger: CTCAATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAACAGACATAGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp ATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTaGCCCCCTCCCATGAAGGGAGGAAGAGGATTCAGG +
Preference number: 3 (lower is better)
Translates to: MWSRWLHPPLDS*PPPMKGGRGFR
Trigger: CCTGAATCCTCTTCCTCCCTTCATGGGAGGGGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp GAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATaGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGT +
Preference number: 3 (lower is better)
Translates to: EPCALATVFNEE*SDLAALPGTAC
Trigger: ACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGGACCTAACCCTAGTTaGATACTGGGCCAGAACTGT +
Preference number: 3 (lower is better)
Translates to: LARALGELSPGVAHTGSPGPNPS*ILGQNC
Trigger: ACAGTTCTGGCCCAGTATCAAACTAGGGTTAGGTCC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp GCTTCTGGTGCTCAGGGCTGGAGGGTGGTAGATATTTaGCCTCTGTACTCATGTGACCCCCTCCCCGCCAAG +
Preference number: 3 (lower is better)
Translates to: ASGAQGWRVVDI*PLYSCDPLPAK
Trigger: CTTGGCGGGGAGGGGGTCACATGAGTACAGAGGTCAAATATCTACCACCCTCCAGCCCTGAGCACCAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp TGGAGTTGCTTGCTGGAAATGCCTCACTTCAGGTGCTaGTTTGGCACACGTGGAAGGGGGAGGGTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: WSCLLEMPHFRC*FGTRGRGRVGP
Trigger: AGGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp CATTCCTCTGCAGCCGCCGCCTCCTCATTTCCTCCCTaGGCTTGTTTGTCCAAGCCACCAAGCCATGTGGTC +
Preference number: 3 (lower is better)
Translates to: HSSAAAASSFPP*ACLSKPPSHVV
Trigger: GACCACATGGCTTGGTGGCTTGGACAAACAAGCTCAGGGAGGAAATGAGGAGGCGGCGGCTGCAGAGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp GCTGCCACCAGGTGGGAGGTGACCCGAAGCAAGACTTaGTTTAGGAACGGGCAGCGTTTGAAGAACCCCATC +
Preference number: 3 (lower is better)
Translates to: AATRWEVTRSKT*FRNGQRLKNPI
Trigger: GATGGGGTTCTTCAAACGCTGCCCGTTCCTAAAGCAAGTCTTGCTTCGGGTCACCTCCCACCTGGTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp CATATAGTGTCAGGGCCACAGGGTGGAACTGATTTCTaGCGGCACTGGTCAGCACTCAGGGTTCCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: HIVSGPQGGTDF*RHWSALRVPQG
Trigger: CCCCTGAGGAACCCTGAGTGCTGACCAGTGCCGGCAGAAATCAGTTCCACCCTGTGGCCCTGACACTATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp ATTGCATGGTCTGTGCCCAACAGGGTTGCATTCCTCTaGAGCCGCCGCCTCCTCATTTCCTCCCTGAGCTTG +
Preference number: 3 (lower is better)
Translates to: IAWSVPNRVAFL*SRRLLISSLSL
Trigger: CAAGCTCAGGGAGGAAATGAGGAGGCGGCGGCTGCAGAGGAATGCAACCCTGTTGGGCACAGACCATGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp CCTATGTCTGTTGGATATTGCTGGTTTGGCTGCCACTaGGAGTGGGGCGAGGGTCCCAGCATTGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PMSVGYCWFGCH*EWGEGPSIERE
Trigger: CTCCCTCTCAATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAACAGACATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp TTGCTTGCTGGAAATGCCTCACTTCAGGTGCTGATTTaGCACACGTGGAAGGGGGAGGGTGGGCCCTTGTCC +
Preference number: 3 (lower is better)
Translates to: LLAGNASLQVLI*HTWKGEGGPLS
Trigger: GGACAAGGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp CTCCCTGAGCTTGTTTGTCCAAGCCACCAAGCCATGTaGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGC +
Preference number: 3 (lower is better)
Translates to: LPELVCPSHQAM*SRWLHPPLDSC
Trigger: GCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCTTGGACAAACAAGCTCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGGCGAAGGCAGCTTTaGCAGTGCAGCGTGGGGCCC +
Preference number: 3 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHGRRQL*QCSVGP
Trigger: GGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp ACCCTGACATATAGTGTCAGGGCCACAGGGTGGAACTaGTTTCTGCCGGCACTGGTCAGCACTCAGGGTTCC +
Preference number: 3 (lower is better)
Translates to: TLTYSVRATGWN*FLPALVSTQGS
Trigger: GGAACCCTGAGTGCTGACCAGTGCCGGCAGAAATCAGTTCCACCCTGTGGCCCTGACACTATATGTCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp TCCTGTGGCTCCTGCCTGCTGCAGTTGGTGTCACCCTaGCATATAGTGTCAGGGCCACAGGGTGGAACTGAT +
Preference number: 3 (lower is better)
Translates to: SCGSCLLQLVSP*HIVSGPQGGTD
Trigger: ATCAGTTCCACCCTGTGGCCCTGACACTATATGTCAGGGTGACACCAACTGCAGCAGGCAGGAGCCACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp CCAGGGAAACAGTTGAGGGAGATGTTTGCCACCATCTaGCCTTCAGCAAGGAACCTGCTCTCTGCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: PGKQLREMFATI*PSARNLLSAPE
Trigger: CTCTGGGGCAGAGAGCAGGTTCCTTGCTGAAGGGCAGATGGTGGCAAACATCTCCCTCAACTGTTTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp GAAGGCCATTCCTGGGGACGTTGGTTGCAGAGCTTCTaGTGCTCAGGGCTGGAGGGTGGTAGATATTTGACC +
Preference number: 3 (lower is better)
Translates to: EGHSWGRWLQSF*CSGLEGGRYLT
Trigger: GGTCAAATATCTACCACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAACCAACGTCCCCAGGAATGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp AGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTaGGGATGTCAGGCTCCATCGGATGACGTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: SQMKTLLTRAGT*GCQAPSDDVFL
Trigger: AAGGAAGACGTCATCCGATGGAGCCTGACATCCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCCACCCCCGACCCGCTaGACTGCTCTCTTGGACCTA +
Preference number: 3 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSPPPTR*TALLDL
Trigger: TAGGTCCAAGAGAGCAGTCAAGCGGGTCGGGGGTGG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAAGTCACCTCACTGCCTaGGTTTCCCCAGATACAGAA +
Preference number: 3 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSHLTA*VSPDTE
Trigger: TTCTGTATCTGGGGAAACCAAGGCAGTGAGGTGACT...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCTCCTGTTAGGGGTGTaGGTGGAGGCCAGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVELLLGV*VEARLG
Trigger: CCCCAACCTGGCCTCCACCAACACCCCTAACAGGAG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp TCCTCTAAACTGCCCTGGGAAGGAAGCCTGGTATGCTaGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: SSKLPWEGSLVC*CGLELCQPRLG
Trigger: TCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCATACCAGGCTTCCTTCCCAGGGCAGTTTAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGCGAGGGTCCCAGCATaGAGAGGGAGAGCCTTAGGC +
Preference number: 3 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHARVPA*RGRALG
Trigger: GCCTAAGGCTCTCCCTCTCAATGCTGGGACCCTCGC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTTGGATATTGCTGGTTaGGCTGCCACTGGGAGTGGG +
Preference number: 3 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGLDIAG*AATGSG
Trigger: CCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGATGCAATTGAGCATTaGGCTTTGGGATGCTTTACT +
Preference number: 3 (lower is better)
Translates to: LARALGELSPGVAHTGSPDAIEH*ALGCFT
Trigger: AGTAAAGCATCCCAAAGCCAAATGCTCAATTGCATC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp AGCTCTTCCACTAGAGCCCTTCCTTTCTCGGGTCTGTaGAGTTGCTTGCTGGAAATGCCTCACTTCAGGTGC +
Preference number: 3 (lower is better)
Translates to: SSSTRALPFSGL*SCLLEMPHFRC
Trigger: GCACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGAAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTTGGATATTGCTGGTTaGGCTGCCACTGGGAGTGGG +
Preference number: 3 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDLDIAG*AATGSG
Trigger: CCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp GGTTCCCTGTATAGGGTCATATGTACCAAAGCCAAATaGAGACCTTGCTCACCAGGGCGGGAACCTGGGGAT +
Preference number: 3 (lower is better)
Translates to: GSLYRVICTKAK*RPCSPGREPGD
Trigger: ATCCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGACCCTATACAGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp GCCACCCCGAGAAAACAGATGATCAACTTTACTGTCTaGCCAGCCATTACCCTCCAAAGTCCCAGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: ATPRKQMINFTV*PAITLQSPSCR
Trigger: TCTGCAGCTGGGACTTTGGAGGGTAATGGCTGGGCAGACAGTAAAGTTGATCATCTGTTTTCTCGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp CTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTaGTGGAAATGCCTCACTTCAGGTGCTGATTTGGCA +
Preference number: 3 (lower is better)
Translates to: LEPFLSRVCGVA*WKCLTSGADLA
Trigger: TGCCAAATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp GTGTGGCACACACAGGGTCTCCCAAAGCTGGATGCCTaGATTTTCAGTCTAGTTGGTCGAATGTCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: VWHTQGLPKLDA*IFSLVGRMSWS
Trigger: GCTCCAAGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTGTGTGTGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTAGGAACGGGCAGCGTTaGAAGAACCCCATCAGCCTT +
Preference number: 3 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTRNGQR*KNPISL
Trigger: AAGGCTGATGGGGTTCTTCAAACGCTGCCCGTTCCT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATAGGAACGGGCAGCGTTaGAAGAACCCCATCAGCCTT +
Preference number: 3 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHRNGQR*KNPISL
Trigger: AAGGCTGATGGGGTTCTTCAAACGCTGCCCGTTCCT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTATGTCTGTTGGATATaGCTGGTTTGGCTGCCACTG +
Preference number: 3 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGYVCWI*LVWLPL
Trigger: CAGTGGCAGCCAAACCAGCAATATCCAACAGACATA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGCAGACAGGATGCAATaGAGCATTTGGCTTTGGGAT +
Preference number: 3 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGADRMQ*SIWLWD
Trigger: ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGTCTGTGGAGTTGCTaGCTGGAAATGCCTCACTTC +
Preference number: 3 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGLWSC*LEMPHF
Trigger: GAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGTCTGTGGAGTTGCTaGCTGGAAATGCCTCACTTC +
Preference number: 3 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTGLWSC*LEMPHF
Trigger: GAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp TACCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTaGGCATTTGGCTTTGGGATGCTTTACTGCAGGTGC +
Preference number: 3 (lower is better)
Translates to: YPPKSQLQTGCN*AFGFGMLYCRC
Trigger: GCACCTGCAGTAAAGCATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp ACTAAGGTCCTTCTCACGGGGAAGGTGATAGAAACTTaGCTGCAGGCCCTGGGGACTTTCATGGTTTCCTTG +
Preference number: 3 (lower is better)
Translates to: TKVLLTGKVIET*LQALGTFMVSL
Trigger: CAAGGAAACCATGAAAGTCCCCAGGGCCTGCAGTCAAGTTTCTATCACCTTCCCCGTGAGAAGGACCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp GTAGCTGTCACATGGGTGGTGATACCAAGACATGGCTaGGTCTGCCACCCCGAGAAAACAGATGATCAACTT +
Preference number: 3 (lower is better)
Translates to: VAVTWVVIPRHG*VCHPEKTDDQL
Trigger: AAGTTGATCATCTGTTTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACCACCCATGTGACAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp TTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATaGCTCACTTCAGGTGCTGATTTGGCACACGTGGAA +
Preference number: 3 (lower is better)
Translates to: FLSRVCGVACWK*LTSGADLAHVE
Trigger: TTCCACGTGTGCCAAATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR GCA 72 bp GTCACATGGGTGGTGATACCAAGACATGGCTGCGTCTaGCACCCCGAGAAAACAGATGATCAACTTTACTGT +
Preference number: 3 (lower is better)
Translates to: VTWVVIPRHGCV*HPEKTDDQLYC
Trigger: ACAGTAAAGTTGATCATCTGTTTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACCACCCATGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CCA 72 bp CTGGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTaGGGAAAATATGGAATGAGCTTTCTCTTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: LGQNCVAFGVEW*GKYGMSFLFLQ
Trigger: CTGGAGGAAGAGAAAGCTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCAAAGGCCTACTTTATaGCTAGGTGAGTGCAGTCAC +
Preference number: 3 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEQRPTL*LGECSH
Trigger: GTGACTGCACTCACCTAGCAATAAAGTAGGCCTTTG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGATTGAGCATTTGGCTTaGGGATGCTTTACTGCAGGT +
Preference number: 3 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEIEHLA*GCFTAG
Trigger: ACCTGCAGTAAAGCATCCCAAAGCCAAATGCTCAAT...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGATGCAATTGAGCATTaGGCTTTGGGATGCTTTACT +
Preference number: 3 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSDAIEH*ALGCFT
Trigger: AGTAAAGCATCCCAAAGCCAAATGCTCAATTGCATC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR TCA 72 bp CCTTGGTTTCCCCAGATACAGAAAGAGGCTGGTGAGTaGTACACACTAGGTTCCCTGTATAGGGTCATATGT +
Preference number: 3 (lower is better)
Translates to: PWFPQIQKEAGE*YTLGSLYRVIC
Trigger: ACATATGACCCTATACAGGGAACCTAGTGTGTATCACTCACCAGCCTCTTTCTGTATCTGGGGAAACCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGGCCAAGGCCTGGGCTaGCCGGTCTCTGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAGQGLG*PVSARP
Trigger: GGGACGCGCAGAGACCGGGCAGCCCAGGCCTTGGCC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGCGTCCCTCAGTCGCTaGAGCCTCCCGGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAASLSR*SLPAAA
Trigger: GGCAGCGGCCGGGAGGCTGCAGCGACTGAGGGACGC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCCCCTCAGGGTGGCCTaGAGACAGCAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAPLRVA*RQQALG
Trigger: GCCCAGGGCCTGCTGTCTGCAGGCCACCCTGAGGGG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTGCACACTCTGCCCATaGTCCCGCGGGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRCTLCP*SRGAGS
Trigger: GCTGCCGGCCCCGCGGGACCATGGGCAGAGTGTGCA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTCCTGCCCCCAGGCCTaGAGGCCCCAAAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRSCPQA*RPQRRQ
Trigger: CTGGCGCCTTTGGGGCCTCCAGGCCTGGGGGCAGGA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGTCCTGCCCCCAGGCCTaGAGGCCCCAAAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAASCPQA*RPQRRQ
Trigger: CTGGCGCCTTTGGGGCCTCCAGGCCTGGGGGCAGGA...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCTGTCCCAGGAGCTCTaGAGGTGCCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRLSQEL*RCPRRS
Trigger: GGAGCGCCTGGGGCACCTGCAGAGCTCCTGGGACAG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGCCTGGTGCTGCCGCTaGAGCAGGGACTCGCCAAGC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRAWCCR*SRDSPS
Trigger: GCTTGGCGAGTCCCTGCTGCAGCGGCAGCACCAGGC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCCTTCCACTCGGCGATaGTGGCCGCCTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAPSTRR*WPPRCG
Trigger: GCCACAGCGAGGCGGCCACCATCGCCGAGTGGAAGG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGAGGACTCGGCCGTGCTaGCGTCCAGCCCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRRTRPC*RPAPRP
Trigger: AGGACGTGGGGCTGGACGCCAGCACGGCCGAGTCCT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGGCGCCAGAGGAGCTaGGAGCCCCTGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAARRQRS*EPLSLE
Trigger: CTCCAGGGACAGGGGCTCCCAGCTCCTCTGGCGCCT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGCAGGCTCTGCGCCTTaGCGCGGATGCTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAAGSAP*RGCSGT
Trigger: AGTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCTGC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCTTGCCCGGGTCGTCTaGCCGCAGCTGGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRLARVV*PQLVLH
Trigger: ATGGAGGACCAGCTGCGGTCAGACGACCCGGGCAAG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCAGCCTCCCGGCCGCTaGCTCCCGCAGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGQPPGR*LPQPVP
Trigger: TGGGACAGGCTGCGGGAGGCAGCGGCCGGGAGGCTG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCGTCCCTCAGTCGCTaGAGCCTCCCGGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEASLSR*SLPAAA
Trigger: GGCAGCGGCCGGGAGGCTGCAGCGACTGAGGGACGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTCTGAGGCCTGGTGCTaGCGCTGCAGCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRSEAWC*RCSRDS
Trigger: CGAGTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGTCTGAGGCCTGGTGCTaGCGCTGCAGCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAASEAWC*RCSRDS
Trigger: CGAGTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGA...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCTGACCCGGCGGTGGTaGCTGCTGCAGGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAALTRRW*LLQVLR
Trigger: CCTCAGAACCTGCAGCAGCCACCACCGCCGGGTCAG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGCTGTGTGCACCCGGTaGAAGGACTCGGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAAVCTR*KDSAVL
Trigger: CAGCACGGCCGAGTCCTTCCACCGGGTGCACACAGC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCCTTGCTGCCCTTCCTaGGACCGCCTGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRPCCPS*DRLWWH
Trigger: GTGCCACCACAGGCGGTCCCAGGAAGGGCAGCAAGG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCGGGGCCGGCAGCGTTaGGGGCTCATCACCCTCGCT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGRGRQR*GLITLA
Trigger: AGCGAGGGTGATGAGCCCGCAACGCTGCCGGCCCCG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGCCTCCACCAGCTGCTaGCCTCTCTGCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAASTSC*PLCSTS
Trigger: GGATGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCCCCTCAGGGTGGCCTaGAGACAGCAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEPLRVA*RQQALG
Trigger: GCCCAGGGCCTGCTGTCTGCAGGCCACCCTGAGGGG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCGCTCGAAGGCTGTGTaGACCCGGTGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAARSKAV*TRWKDS
Trigger: CGAGTCCTTCCACCGGGTGCACACAGCCTTCGAGCG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGGCAGCAAAGCGCTCTaGCCAGCTGGCCGTGGACTT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAGSKAL*PAGRGL
Trigger: AAGTCCACGGCCAGCTGGGCAGAGCGCTTTGCTGCC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGGCAGCAAAGCGCTCTaGCCAGCTGGCCGTGGACTT +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRGSKAL*PAGRGL
Trigger: AAGTCCACGGCCAGCTGGGCAGAGCGCTTTGCTGCC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGAGGAGGCCAAGGCCTaGGCTGCCCGGTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGEEAKA*AARSLR
Trigger: GCGCAGAGACCGGGCAGCCCAGGCCTTGGCCTCCTC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGTTGGACTGCTCCAGTTaGGCCTTCCGCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAALDCSS*AFRPAA
Trigger: GGCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAA...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCGGGTGGCCACGTCCTaGAACTGCTGCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRRVATS*NCCTWT
Trigger: TGTCCAGGTGCAGCAGTTCCAGGACGTGGCCACCCG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCGTGTCCACTAGCTaGGTCCGGCGCCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEAVSTS*VRRPAQ
Trigger: CTGTGCCGGGCGCCGGACCCAGCTAGTGGACACGGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGGGGACCTGGGGTGGTaGGATGCTAGCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAGDLGW*DASSST
Trigger: AGTGGAAGAGCTAGCATCTCACCACCCCAGGTCCCC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGCGTGCTCCAGGTTGTaGCGGGCATTGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRACSRL*RALESF
Trigger: GAAGGACTCCAATGCCCGGCACAACCTGGAGCACGC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGTGGCCCCTTCGTCCTaGCCCACATCTTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRVAPSS*PTSSPE
Trigger: CTCTGGTGAAGATGTGGGGCAGGACGAAGGGGCCAC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAATCCCTGGGCCTGCTaGTCCAGGTGCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAANPWAC*SRCSIT
Trigger: GGTGATGGAGCACCTGGAGCAGCAGGCCCAGGGATT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGCTTCACCTCCCTGCTaGGTGGGTGGCCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAASPPC*VGGHSL
Trigger: TAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCTGTCCCAGGAGCTCTaGAGGTGCCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLSQEL*RCPRRS
Trigger: GGAGCGCCTGGGGCACCTGCAGAGCTCCTGGGACAG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGCGTCCCTCAGTCGCTaGAGCCTCCCGGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLASLSR*SLPAAA
Trigger: GGCAGCGGCCGGGAGGCTGCAGCGACTGAGGGACGC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGAGCTCCAGGAGGTCTaGCCACATCTCGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRELQEV*PHLVQP
Trigger: GGGCTGAACGAGATGTGGGCAGACCTCCTGGAGCTC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCCAGCATATGCTGTCTaGAGACGGGTGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAPAYAV*RRVATS
Trigger: GGACGTGGCCACCCGTCTGCAGACAGCATATGCTGG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGCATCGAGCAGCGCCTaGCACGCGGCAGACACCTCC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGASSSA*HAADTS
Trigger: GGAGGTGTCTGCCGCGTGGCAGGCGCTGCTCGATGC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCTTTCTTGCCGAGGCTaGCGTCGGGGCCGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREELSCRG*RRGRRG
Trigger: CCCTCTCCGGCCCCGACGCCAGCCTCGGCAAGAAAG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGAGGGCCTGCAGCCGATaGGTCACATCTGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRRACSR*VTSGES
Trigger: GGATTCCCCAGATGTGACCCATCGGCTGCAGGCCCT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGAGTCCATCAGCTGCTaGGACTCACGCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRESISC*DSRSRA
Trigger: TGCCCTGGAGCGTGAGTCCCAGCAGCTGATGGACTC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGGGTCTTCTCCTTTGTaGTGGCCTGCAGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAGSSPL*WPAARP
Trigger: GGGACGAGCTGCAGGCCACCACAAAGGAGAAGACCC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCAGAGGAGACATCCCTaGGCCTCTCCTGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAQRRHP*ASPGSR
Trigger: TCGAGACCCAGGAGAGGCCCAGGGATGTCTCCTCTG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCAGGCTCTGCGCCTTaGCGCGGATGCTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEAGSAP*RGCSGT
Trigger: AGTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCTGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCGGTGCGGTAGGTGCTaGAGGCCTGCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGRCGRC*RPAAAA
Trigger: AGCAGCAGCTGCAGGCCTTCAGCACCTACCGCACCG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCCTGCAGCCTCTGCTaGCGCAGGTCCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSCSLC*RRSAWA
Trigger: GGCCCAGGCGGACCTGCGTCAGCAGAGGCTGCAGGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGTGCACTCGGAGGGCTaGGTCCACAGCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLVHSEG*VHSLPP
Trigger: CGGCGGGAGGCTGTGGACTCAGCCCTCCGAGTGCAC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCTTGCCCGGGTCGTCTaGCCGCAGCTGGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLARVV*PQLVLH
Trigger: ATGGAGGACCAGCTGCGGTCAGACGACCCGGGCAAG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCGGGGCCGGCAGCGTTaGGGGCTCATCACCCTCGCT +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKRGRQR*GLITLA
Trigger: AGCGAGGGTGATGAGCCCGCAACGCTGCCGGCCCCG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCCATCTGCACACTCTaGCCATGGTCCCGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSICTL*PWSRGA
Trigger: GGCCCCGCGGGACCATGGGCAGAGTGTGCAGATGGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCAGAGTCGTTTGGACTaGTCCAGTTGGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAQSRLD*SSWAFR
Trigger: GCGGAAGGCCCAACTGGAGCAGTCCAAACGACTCTG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGCTTGCGCGCAACCATaGCATGAGCCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRACAQP*HEPPGR
Trigger: TCTTCCAGGAGGCTCATGGCATGGTTGCGCGCAAGC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGAGCGAGGGTGTGGCTaGGGCTCTCCCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEERGCG*GSPTSC
Trigger: GCAGGATGTGGGAGAGCCGCAGCCACACCCTCGCTC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCTGGCAGCCGAGAGGTaGTGGGTCTTCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRLAAER*WVFSFV
Trigger: CACAAAGGAGAAGACCCAGCACCTCTCGGCTGCCAG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGGTAGTACTGCTGTaGCTCGTTGGCGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRQVVLL*LVGVPQ
Trigger: CTGAGGGACGCCAACGAGGCACAGCAGTACTACCTG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTTGTCCACCCGCTCCTaGCCAATCGCCCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREELSTRS*PIAPVS
Trigger: GGAGACCGGGGCGATTGGGCAGGAGCGGGTGGACAA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCGGGCAGCTCGCGGTaGTTCTCGTCGATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSGSSR*FSSMRP
Trigger: GGGCCTCATCGACGAGAAGCACCGCGAGCTGCCCGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGGCCCAGTCTCCTCTaGGGGTCTCTCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAARPSLL*GSLCNL
Trigger: CAGATTGCAGAGAGACCCGCAGAGGAGACTGGGCCT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGGCGAAGGCAGCTTTTaGAGTGCAGCGTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEGEGSF*SAAWGP
Trigger: CGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCAGAGAACCGTTTCCTaGCCCCAGGCCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGQRTVS*PQAWRP
Trigger: GGGCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGGAGAGGAGGGCGTGTaGCTCAGAGAACCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAGEEGV*LREPFP
Trigger: AGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGTTGCAGAGCTTCTGGTaGTCAGGGCTGGAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAALQSFW*SGLEGG
Trigger: ACCACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAA...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCCCGACCCGCTTGACTaGTCTCTTGGACCTAACCCT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAPDPLD*SLGPNP
Trigger: AGGGTTAGGTCCAAGAGAGCAGTCAAGCGGGTCGGG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGGGTTGCATTCCTCTaGAGCCGCCGCCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAARVAFL*SRRLLI
Trigger: AATGAGGAGGCGGCGGCTGCAGAGGAATGCAACCCT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCTGACCCGGCGGTGGTaGCTGCTGCAGGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLTRRW*LLQVLR
Trigger: CCTCAGAACCTGCAGCAGCCACCACCGCCGGGTCAG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGTGCTGACCCGGCGGTaGTGGCTGCTGCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEVLTRR*WLLQVL
Trigger: CAGAACCTGCAGCAGCCACCACCGCCGGGTCAGCAC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGAGAGGGGCTCCGTGGTaGGCCTCTCATCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGRGAPW*ASHPQW
Trigger: CCACTGGGGATGAGAGGCCCACCACGGAGCCCCTCT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGAGGAGGCCAAGGCCTaGGCTGCCCGGTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKEEAKA*AARSLR
Trigger: GCGCAGAGACCGGGCAGCCCAGGCCTTGGCCTCCTC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCCACTCGGCGATGGTaGCCGCCTCGCTGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSTRRW*PPRCGP
Trigger: CGGGCCACAGCGAGGCGGCCACCATCGCCGAGTGGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGCCGTGTCCACTAGCTaGGTCCGGCGCCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVAVSTS*VRRPAQ
Trigger: CTGTGCCGGGCGCCGGACCCAGCTAGTGGACACGGC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCTCCCCGCCAAGACCTaGGGCCAGGACGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREELPAKT*GQDVEK
Trigger: CTTCTCCACGTCCTGGCCCCAGGTCTTGGCGGGGAG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGACCTTGCTAGGGCACTaGGAGAGCTTAGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAATLLGH*ESLALV
Trigger: CACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAGGT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGAGTGCCATAGTCGGCTaGCTGGGCCAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESAIVG*LGQRQP
Trigger: AGGCTGCCTCTGGCCCAGTCAGCCGACTATGGCACT...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGGCTGGCCAGCTGCTTaGTGTTCCGGCCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGGWPAA*CSGRSP
Trigger: AGGACTACGGCCGGAACATCAAGCAGCTGGCCAGCC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGTCTCGATCTGCCGGATaGTGCTCTCCATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAASRSAG*CSPSRR
Trigger: TCTCCTGGATGGAGAGCATCATCCGGCAGATCGAGA...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCTCGCGGATCTCCTCTaGGGCCTGGTGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLADLL*GLVLPL
Trigger: CAGCGGCAGCACCAGGCCTCAGAGGAGATCCGCGAG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGGCAGGGGCAGGCTCTaGGCCTTGACGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKGRGRL*ALTRML
Trigger: GAGCATCCGCGTCAAGGCGCAGAGCCTGCCCCTGCC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGCCCAGCTGCCATGTTaGTCAGCTCCTCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRAQLPC*SAPQST
Trigger: AGTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCCTTTGTGGTGGCCTaGAGCTCGTCCCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSFVVA*SSSQSR
Trigger: CCGGCTCTGGGACGAGCTGCAGGCCACCACAAAGGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGAGGCGGCCAGCAGCTaGATGCGCGTGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGEAASS*MRVSMS
Trigger: GCTCATTGACACGCGCATGCAGCTGCTGGCCGCCTC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGCCACGTCCTGGAACTaGTGCACCTGGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGATSWN*CTWTPS
Trigger: GCTGGGTGTCCAGGTGCAGCAGTTCCAGGACGTGGC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGCATCGAGCAGCGCCTaGCACGCGGCAGACACCTCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLASSSA*HAADTS
Trigger: GGAGGTGTCTGCCGCGTGGCAGGCGCTGCTCGATGC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGCATCGAGCAGCGCCTaGCACGCGGCAGACACCTCC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVASSSA*HAADTS
Trigger: GGAGGTGTCTGCCGCGTGGCAGGCGCTGCTCGATGC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTCCTGGGTCTCGATCTaGCGGATGATGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRSWVSI*RMMLSI
Trigger: GATGGAGAGCATCATCCGGCAGATCGAGACCCAGGA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGAGGAGGCCAAGGCCTaGGCTGCCCGGTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWREEAKA*AARSLR
Trigger: GCGCAGAGACCGGGCAGCCCAGGCCTTGGCCTCCTC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGCATCCACACGGGCCTaGATGGCGGCCACGTCACGC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVASTRA*MAATSR
Trigger: GCGTGACGTGGCCGCCATCCAGGCCCGTGTGGATGC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTCAACCCGCGGCGTATaGCCCAGAATCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRSTRGV*PRISFC
Trigger: GCAGAATGAGATTCTGGGCCATACGCCGCGGGTTGA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCCACTCGGCGATGGTaGCCGCCTCGCTGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSTRRW*PPRCGP
Trigger: CGGGCCACAGCGAGGCGGCCACCATCGCCGAGTGGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGAGGACTCGGCCGTGCTaGCGTCCAGCCCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLRTRPC*RPAPRP
Trigger: AGGACGTGGGGCTGGACGCCAGCACGGCCGAGTCCT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTCCTGCTCCTTGTTCTaGATGGCCTCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRSCSLF*MASAFS
Trigger: GGAGAAGGCAGAGGCCATCCAGAACAAGGAGCAGGA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCTCTCGGTGGCCGCATaGTGGGAAACTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLSVAA*WETGAS
Trigger: GGAGGCTCCAGTTTCCCACCATGCGGCCACCGAGAG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCCTGCCCCCAGGCCTaGAGGCCCCAAAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSCPQA*RPQRRQ
Trigger: CTGGCGCCTTTGGGGCCTCCAGGCCTGGGGGCAGGA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCTGGCTGCCACCAGGTaGGAGGTGACCCGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLAATR*EVTRSK
Trigger: CTTGCTTCGGGTCACCTCCCACCTGGTGGCAGCCAG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCAGGGGGCCTCATTCTaGATGCCTGCCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEQGASF*MPAPVA
Trigger: AGCCACAGGGGCAGGCATCCAGAATGAGGCCCCCTG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGGAAGCCTGGTATGCTaGTGTGGACTGGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRGSLVC*CGLELC
Trigger: ACACAGCTCCAGTCCACACCAGCATACCAGGCTTCC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTGCCCATCCTTGTGCTaGCCCGGCGGTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRCPSLC*PGGGGC
Trigger: GCAGCCACCACCGCCGGGTCAGCACAAGGATGGGCA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGCAGGCTCTGCGCCTTaGCGCGGATGCTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVAGSAP*RGCSGT
Trigger: AGTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCTGC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCCTTTGTCTTGTCCGTaGTCCACTTGCTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAPLSCP*STCWSP
Trigger: AGGAGACCAGCAAGTGGATCACGGACAAGACAAAGG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGTCACGCTCCAGCCCTaGCAACTTCCTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEVTLQP*QLPLDG
Trigger: GCCATCCAGAGGAAGTTGTCAGGGCTGGAGCGTGAC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCTCGCGGATCTCCTCTaGGGCCTGGTGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGLADLL*GLVLPL
Trigger: CAGCGGCAGCACCAGGCCTCAGAGGAGATCCGCGAG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCGCGGATCTCCTCTaGGGCCTGGTGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRLADLL*GLVLPL
Trigger: CAGCGGCAGCACCAGGCCTCAGAGGAGATCCGCGAG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCTCCTTGTCTTTCTTaGCGAGGCTGGCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSPCLS*RGWRRG
Trigger: GCCCCGACGCCAGCCTCGGCAAGAAAGACAAGGAGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCCAATATCCTCCTTCTaGTCAGGGTGCGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAPISSF*SGCESI
Trigger: GATGGACTCGCACCCTGAGCAGAAGGAGGATATTGG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTGGCCCTGCAGGGATTaGTGCAGGCCCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVWPCRD*CRPCHS
Trigger: GCTGTGGCAGGGCCTGCAGCAATCCCTGCAGGGCCA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGAGCGAGGGTGTGGCTaGGGCTCTCCCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVERGCG*GSPTSC
Trigger: GCAGGATGTGGGAGAGCCGCAGCCACACCCTCGCTC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGAGCTGCTGCCCTCTCTaGAGCACATCCTCAACCCGC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESCCPL*STSSTR
Trigger: GCGGGTTGAGGATGTGCTGCAGAGAGGGCAGCAGCT...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTCCACCGCACGCTGCTaGCGCAAATGTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESTARC*RKCRFS
Trigger: GCTGAAGCGACATTTGCGGCAGCAGCGTGCGGTGGA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTTGTCCACCCGCTCCTaGCCAATCGCCCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLSTRS*PIAPVS
Trigger: GGAGACCGGGGCGATTGGGCAGGAGCGGGTGGACAA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGAGCTCCAGGAGGTCTaGCCACATCTCGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEELQEV*PHLVQP
Trigger: GGGCTGAACGAGATGTGGGCAGACCTCCTGGAGCTC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGAAGGACTCGGCCGTaGTGGCGTCCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGRTRP*WRPAPR
Trigger: ACGTGGGGCTGGACGCCAGCACGGCCGAGTCCTTCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGGAAGGACTCGGCCGTaGTGGCGTCCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGGRTRP*WRPAPR
Trigger: ACGTGGGGCTGGACGCCAGCACGGCCGAGTCCTTCC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGACGTCCTGGAACTGCTaGACCTGGACACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGTSWNC*TWTPSR
Trigger: CCTGCTGGGTGTCCAGGTGCAGCAGTTCCAGGACGT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCGGCAGACACCTCCTaGTCCTTGTTCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEAADTS*SLFWMA
Trigger: GGCCATCCAGAACAAGGAGCAGGAGGTGTCTGCCGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTCCTCTGAGGCCTGGTaGTGCCGCTGCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSSEAW*CRCSRD
Trigger: GTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCCTCTGAGGCCTGGTaGTGCCGCTGCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSSEAW*CRCSRD
Trigger: GTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGACACCTCCAGCAACATaGGGAGCCGCTCCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKTPPAT*GAAPSG
Trigger: CCCGCTGGGAGCGGCTCCGCATGTTGCTGGAGGTGT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGGCGAAGGCAGCTTTTaGAGTGCAGCGTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKGEGSF*SAAWGP
Trigger: CGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGAGACATGGCTGCGTCTaGCACCCCGAGAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRRHGCV*HPEKTD
Trigger: ATCTGTTTTCTCGGGGTGGCAGACGCAGCCATGTCT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTTGGGGGAAAATGCCTaGTGCCCTCCGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKLGENA*CPPPSP
Trigger: GGGGGAGGGCGGAGGGCAGCAGGCATTTTCCCCCAA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGTTGAGGGAGATGTTTaGCACCATCTGCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRVEGDV*HHLPFS
Trigger: GCTGAAGGGCAGATGGTGGCAAACATCTCCCTCAAC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGTGCTGACCCGGCGGTaGTGGCTGCTGCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVVLTRR*WLLQVL
Trigger: CAGAACCTGCAGCAGCCACCACCGCCGGGTCAGCAC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTCTGCAGTGCCAGGGTaGTCTCGAGCCTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSAVPG*SRASGA
Trigger: GGCGCCAGAGGCTCGAGACCACCCTGGCACTGCAGA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCCAGAGAGCAGCCGGTaGGCGTCTTGCAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVPESSR*ASCSQA
Trigger: GGCTTGGCTGCAAGACGCCCACCGGCTGCTCTCTGG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCCGATGGGTCACATCTaGGGAATCCCGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRPMGHI*GIPKLF
Trigger: GAAGAGTTTCGGGATTCCCCAGATGTGACCCATCGG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCACCTCCCTGCTGCGTaGGTGGCCACTCTCTACCAA +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGHLPAA*VATLYQ
Trigger: TTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGTGTTCAGATGGTCCTaGTACTGCTTCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAVFRWS*YCFTSL
Trigger: CAGGGAGGTGAAGCAGTACCAGGACCATCTGAACAC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCACCTGGTGTTCAGATaGTCCTGGTACTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRHLVFR*SWYCFT
Trigger: GGTGAAGCAGTACCAGGACCATCTGAACACCAGGTG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCCTGACAACTTCCTCTaGATGGCGATGATACCTGCC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAPDNFL*MAMIPA
Trigger: GGCAGGTATCATCGCCATCCAGAGGAAGTTGTCAGG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGACCAGGGCTGTAAACTaGGGCTTCTCATCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRTRAVN*GFSSIS
Trigger: GCTGATGGATGAGAAGCCCCAGTTTACAGCCCTGGT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGCAGGTCGGAGCTCCTaGCAGCCGAGAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGAGRSS*QPRGAG
Trigger: CCCAGCACCTCTCGGCTGCCAGGAGCTCCGACCTGC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCGTCTGACCGCAGCTaGTCCTCCATGGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSSDRS*SSMALI
Trigger: GATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCGCTCCTCAAGGTCCTaGCAGTCGATCTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKRSSRS*QSISAA
Trigger: GGCGGCGGAGATCGACTGCCAGGACCTTGAGGAGCG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGCTTCAGCATCACAATaGCGCCCTCTTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRASASQ*RPLHPW
Trigger: CCAAGGATGAAGAGGGCGCCATTGTGATGCTGAAGC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTGTTCCCCCTCAGGGTaGCCTGCAGACAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVCSPSG*PADSRP
Trigger: GGGCCTGCTGTCTGCAGGCCACCCTGAGGGGGAACA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGTCTCCCGCTTGAGCTaGAACAGGTGGTACATGTTC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAVSRLS*NRWYMF
Trigger: GAACATGTACCACCTGTTCCAGCTCAAGCGGGAGAC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGTCCAAAGTCCCCGCTaGCCAGGTAGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKVQSPR*PGRAPG
Trigger: CCCAGGAGCCCTACCTGGCCAGCGGGGACTTTGGAC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCGCATGGTGGGAAACTaGAGCCTCCCCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGRMVGN*SLPCCL
Trigger: GAGACAGCAGGGGAGGCTCCAGTTTCCCACCATGCG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGGGACGTTCTCTCGGTaGCCGCATGGTGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGGTFSR*PHGGKL
Trigger: CAGTTTCCCACCATGCGGCCACCGAGAGAACGTCCC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCAGCCTAGGGGACCCTaGCTCCCTCCGATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKQPRGP*LPPIGR
Trigger: CCTGCCTATCGGAGGGAGCCAGGGTCCCCTAGGCTG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCGTCAATCTCATCCTTaGTACCTGCATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRRQSHP*YLHAAA
Trigger: TGCAGCAGCATGCAGGTATCAAGGATGAGATTGACG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTGGAAGCCAAGGCACTaGGCGAGGGTGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRWKPRH*ARVWLR
Trigger: CCGCAGCCACACCCTCGCTCAGTGCCTTGGCTTCCA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGGTGCTTCTCGTCGATaGGGCCCAGGATCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLGASRR*GPGSRH
Trigger: GTGCCGAGATCCTGGGCCTCATCGACGAGAAGCACC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGTGCTTCTCGTCGATaGGGCCCAGGATCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVGASRR*GPGSRH
Trigger: GTGCCGAGATCCTGGGCCTCATCGACGAGAAGCACC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCCTGGTGATACTTCATaGGCAGTTCCACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRPGDTS*AVPQRR
Trigger: TCTCCTCTGTGGAACTGCTCATGAAGTATCACCAGG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCGCCTTCCTCCTCTTaGGGCCCAGTCTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSPSSS*GPVSSA
Trigger: CGCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCCCTGCCCTGGGACTaGAGCGGGGGCCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSLPWD*SGGHPE
Trigger: CTCGGGGTGGCCCCCGCTTCAGTCCCAGGGCAGGGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGCGGTGCTCACGCCCTaGAGCCAGGACAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGAVLTP*SQDSIS
Trigger: GGAGATGCTGTCCTGGCTGCAGGGCGTGAGCACCGC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGCGGTGCTCACGCCCTaGAGCCAGGACAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRAVLTP*SQDSIS
Trigger: GGAGATGCTGTCCTGGCTGCAGGGCGTGAGCACCGC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAAGGCCTGCAGCTGCTaGTGGACGCCCGTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGKACSC*WTPVSE
Trigger: CTCGCTGACGGGCGTCCAGCAGCAGCTGCAGGCCTT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGAAGGCCTGCAGCTGCTaGTGGACGCCCGTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRKACSC*WTPVSE
Trigger: CTCGCTGACGGGCGTCCAGCAGCAGCTGCAGGCCTT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCAGCTGGTCCCACTGTaGCGACACCTCCTTTATGCG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEQLVPL*RHLLYA
Trigger: CGCATAAAGGAGGTGTCGGCACAGTGGGACCAGCTG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGGGAATCCCTGGGCCTaGTGCTCCAGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKGNPWA*CSRCSI
Trigger: GATGGAGCACCTGGAGCAGCAGGCCCAGGGATTCCC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGAGCTCCCGCAGGGCCTaGAGCCGATGGGTCACATCT +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSSRRA*SRWVTS
Trigger: AGATGTGACCCATCGGCTGCAGGCCCTGCGGGAGCT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGAGGATGTCGAACCTGTaGTGCACGACCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREERMSNL*CTTSRS
Trigger: GGACCTGGAGGTCGTGCAGCACAGGTTCGACATCCT...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCACTGGTCAGGTCCTTaGCCGGGTCGTCTGACCGCA +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLHWSGP*PGRLTA
Trigger: TGCGGTCAGACGACCCGGGCAAGGACCTGACCAGTG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCACTGGTCAGGTCCTTaGCCGGGTCGTCTGACCGCA +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKHWSGP*PGRLTA
Trigger: TGCGGTCAGACGACCCGGGCAAGGACCTGACCAGTG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGCCGCCTCCACCAGCTaGTGCCCTCTCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRAASTS*CPLCST
Trigger: TGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGCGGC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTTTTCTGAAATCCACTaGTCCAGGTCGTCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRFSEIH*SRSSVS
Trigger: GGAGACCGACGACCTGGAGCAGTGGATTTCAGAAAA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTTGTCCACCCGCTCCTaGCCAATCGCCCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGLSTRS*PIAPVS
Trigger: GGAGACCGGGGCGATTGGGCAGGAGCGGGTGGACAA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCGGGCAGCTCGCGGTaGTTCTCGTCGATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSGSSR*FSSMRP
Trigger: GGGCCTCATCGACGAGAAGCACCGCGAGCTGCCCGA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCGCTCGAAGGCTGTGTaGACCCGGTGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVRSKAV*TRWKDS
Trigger: CGAGTCCTTCCACCGGGTGCACACAGCCTTCGAGCG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAGAGAACCGTTTCCTaGCCCCAGGCCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRQRTVS*PQAWRP
Trigger: GGGCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCACTCAGCCAGGCCCTaGCAACCGTGGGAGGGTACC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGHSARP*QPWEGT
Trigger: GGTACCCTCCCACGGTTGGCAGGGCCTGGCTGAGTG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTTGACGCGGATGCTCTaGGACTCGTTGATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLTRML*DSLMAV
Trigger: CACCGCCATCAACGAGTCCCAGAGCATCCGCGTCAA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGATCCTGCTGTAAGGTaGCTGGTTGCCCACATTTTC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAADPAVR*LVAHIF
Trigger: GAAAATGTGGGCAACCAGCCACCTTACAGCAGGATC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCCCAGGACCAGGCGGTaGTTGCCATCTACAATGTCG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGPRTRR*LPSTMS
Trigger: CGACATTGTAGATGGCAACCACCGCCTGGTCCTGGG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGAGGCCACAGCCTTCTaGGTGATGGAGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLEATAF*VMESQA
Trigger: GGCCTGGCTCTCCATCACCCAGAAGGCTGTGGCCTC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGAGGCCACAGCCTTCTaGGTGATGGAGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKEATAF*VMESQA
Trigger: GGCCTGGCTCTCCATCACCCAGAAGGCTGTGGCCTC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCGCAGAAGAGTCACGTaGTCAAAGTCTTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAARRRVT*SKSCPI
Trigger: AATGGGGCAAGACTTTGACCACGTGACTCTTCTGCG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGATCTCCTCTGAGGCCTaGTGCTGCCGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKISSEA*CCRCSR
Trigger: CCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGAGAT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGAGCGCTCTGCCCAGCTaGCCGTGGACTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSALPS*PWTSQK
Trigger: CTTTTGAGAAGTCCACGGCCAGCTGGGCAGAGCGCT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCTTTCAGCTCAAGCGTaGTGGGCTTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREELSAQA*WASPGQ
Trigger: CTGCCCTGGAGAAGCCCACCACGCTTGAGCTGAAAG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGCTGCCACTGGGAGTaGGGCGAGGGTCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGCHWE*GEGPSI
Trigger: AATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGGGGCCTATGTCTGTTaGATATTGCTGGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRGAYVC*ILLVWL
Trigger: CAGCCAAACCAGCAATATCCAACAGACATAGGCCCC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCCCCGCCAAGACCTaGGGCCAGGACGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRLPAKT*GQDVEK
Trigger: CTTCTCCACGTCCTGGCCCCAGGTCTTGGCGGGGAG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAGCCTAGGGGACCCTaGCTCCCTCCGATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRQPRGP*LPPIGR
Trigger: CCTGCCTATCGGAGGGAGCCAGGGTCCCCTAGGCTG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCTTCTCCCTTACTGTTaGAAGCCTTCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAALLPYC*KPSCWA
Trigger: GGCCCAACAAGAAGGCTTCCAACAGTAAGGGAGAAG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS-3UTR TCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTTAGCTCACTGTTCCTaGGCACACAGTACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRLAHCS*AHSTGC
Trigger: ACAACCTGTACTGTGTGCTCAGGAACAGTGAGCTAA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTGTCCTTGCGGGCCGTaGTGCGCTTCTGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLCPCGP*CASGHG
Trigger: ACCATGACCAGAAGCGCATCACGGCCCGCAAGGACA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGAAGATCTGCTCCAGGTaGGCATCCAGCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLKICSR*ASSPRS
Trigger: GCTCCGTGGGCTGGATGCTCACCTGGAGCAGATCTT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGTGCACTCGGAGGGCTaGGTCCACAGCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPVHSEG*VHSLPP
Trigger: CGGCGGGAGGCTGTGGACTCAGCCCTCCGAGTGCAC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCCTCTGGATGGCGATaGTACCTGCCAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSSGWR*YLPGPA
Trigger: GGCGGGACCTGGCAGGTATCATCGCCATCCAGAGGA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCGCCTTCCTCCTCTTaGGGCCCAGTCTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSPSSS*GPVSSA
Trigger: CGCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCCAGAAGTATGACCTaGGCAGCAAGGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSRSMT*AARGRP
Trigger: TGGCCTTCCCCTTGCTGCTCAGGTCATACTTCTGGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGCCACAGGGTGGAACTaGTTTCTGCCGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVATGWN*FLPALV
Trigger: GACCAGTGCCGGCAGAAATCAGTTCCACCCTGTGGC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGGCAGGGGCAGGCTCTaGGCCTTGACGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRGRGRL*ALTRML
Trigger: GAGCATCCGCGTCAAGGCGCAGAGCCTGCCCCTGCC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGCGTGCTCCAGGTTGTaGCGGGCATTGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKACSRL*RALESF
Trigger: GAAGGACTCCAATGCCCGGCACAACCTGGAGCACGC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGAAGCGCCGGGCCAGTTaGTCTAGCTTCTCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVKRRAS*SSFSCR
Trigger: TCGGCAGGAGAAGCTAGAGCAACTGGCCCGGCGCTT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGCCTTCCGCCCAGCTaGCATGTTGCTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGLPPS*HVAQLL
Trigger: GAGGAGCTGAGCAACATGGCAGCTGGGCGGAAGGCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGCTTCACCTCCCTGCTaGGTGGGTGGCCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLASPPC*VGGHSL
Trigger: TAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCACCAGGGTCTGAAATaGCTGCCACCTGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEHQGLK*LPPGVQ
Trigger: CTGAACACCAGGTGGCAGGCATTTCAGACCCTGGTG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGCTCTCCCACATCCTaGCCAGGGCATTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGSPTS*PGHSSQ
Trigger: CTGGCTGGAATGCCCTGGGCAGGATGTGGGAGAGCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCTGTCCTCAATCAGCTaGACCTTCTCCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAALSSIS*TFSLIL
Trigger: CAAGATCAAGGAGAAGGTGCAGCTGATTGAGGACAG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCCTTTGTGGTGGCCTaGAGCTCGTCCCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSFVVA*SSSQSR
Trigger: CCGGCTCTGGGACGAGCTGCAGGCCACCACAAAGGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCACTGGTCAGGTCCTTaGCCGGGTCGTCTGACCGCA +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGHWSGP*PGRLTA
Trigger: TGCGGTCAGACGACCCGGGCAAGGACCTGACCAGTG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCCACCGCACGCTGCTaGCGCAAATGTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSTARC*RKCRFS
Trigger: GCTGAAGCGACATTTGCGGCAGCAGCGTGCGGTGGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGACATGTTCTCCAGCTTaGGCTTGCGCTCTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGTCSPA*ACALPP
Trigger: TGGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGACGTCCTGGAACTGCTaGACCTGGACACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLTSWNC*TWTPSR
Trigger: CCTGCTGGGTGTCCAGGTGCAGCAGTTCCAGGACGT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGCCACGTCCTGGAACTaGTGCACCTGGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGATSWN*CTWTPS
Trigger: GCTGGGTGTCCAGGTGCAGCAGTTCCAGGACGTGGC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCCAGCATATGCTGTCTaGAGACGGGTGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLPAYAV*RRVATS
Trigger: GGACGTGGCCACCCGTCTGCAGACAGCATATGCTGG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGTTCTGGATGGCCTCTaGCTTCTCCCCAGCATATGC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGVLDGL*LLPSIC
Trigger: GCATATGCTGGGGAGAAGGCAGAGGCCATCCAGAAC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTCCTGGGTCTCGATCTaGCGGATGATGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESWVSI*RMMLSI
Trigger: GATGGAGAGCATCATCCGGCAGATCGAGACCCAGGA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCTCCTGGACATCACCTaGTGCAGTTTCTCGCGGATC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLLDIT*CSFSRI
Trigger: GATCCGCGAGAAACTGCAGCAGGTGATGTCCAGGAG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCCTGTGGCTCCTGCCTaGTGCAGTTGGTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVPVAPA*CSWCHP
Trigger: AGGGTGACACCAACTGCAGCAGGCAGGAGCCACAGG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGAAGGAAGCCTGGTATaGTGGTGTGGACTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEEGSLV*WCGLEL
Trigger: CAGCTCCAGTCCACACCAGCATACCAGGCTTCCTTC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGAGTGAGGACGTAGCCTaGTCTGCTGGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLSEDVA*SAGRWL
Trigger: CAGCCACCTCCCAGCAGAGCAGGCTACGTCCTCACT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTGCACACTCTGCCCATaGTCCCGCGGGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPCTLCP*SRGAGS
Trigger: GCTGCCGGCCCCGCGGGACCATGGGCAGAGTGTGCA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTGGAAGCCTTCTTGTTaGGCCCCTCCAGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGWKPSC*APPGHA
Trigger: AGCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTGGAAGCCTTCTTGTTaGGCCCCTCCAGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEWKPSC*APPGHA
Trigger: AGCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCAGCAATCTCACAGATaGCATGTCTCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEQQSHR*HVSGPG
Trigger: CCCTGGCCCTGAGACATGCCATCTGTGAGATTGCTG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCCGTGTCGGTCTCGATaGCCTCATGCTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEPCRSR*PHASSW
Trigger: CCAAGAAGAAGCATGAGGCCATCGAGACCGACACGG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCGGTCCTGGATGACCTaGGGGTCACAAGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVRSWMT*GSQGWY
Trigger: GTACCAGCCTTGTGACCCCCAGGTCATCCAGGACCG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGAAGCACTGCTCCAAGTaGCTGATGCGGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGKHCSK*LMRSWM
Trigger: CATCCAGGACCGCATCAGCCACTTGGAGCAGTGCTT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCTAGCCACCCTTCATaGGAAGCCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSSHPS*EASSAT
Trigger: TGTGGCAGAGCTGGCTTCCCATGAAGGGTGGCTAGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTTGTTGAGGTCAGCATaGGTCTGCAAGCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREELLRSA*VCKRRS
Trigger: CGACCTGCGCTTGCAGACCCATGCTGACCTCAACAA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCAACCCGCGGCGTATaGCCCAGAATCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSTRGV*PRISFC
Trigger: GCAGAATGAGATTCTGGGCCATACGCCGCGGGTTGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCTGTCTGCAGACGGGTaGCCACGTCCTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLSADG*PRPGTA
Trigger: AGCAGTTCCAGGACGTGGCCACCCGTCTGCAGACAG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCTGTCTGCAGACGGGTaGCCACGTCCTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKLSADG*PRPGTA
Trigger: AGCAGTTCCAGGACGTGGCCACCCGTCTGCAGACAG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGCCGTGTCCACTAGCTaGGTCCGGCGCCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGAVSTS*VRRPAQ
Trigger: CTGTGCCGGGCGCCGGACCCAGCTAGTGGACACGGC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCAGAGGAGACATCCCTaGGCCTCTCCTGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLQRRHP*ASPGSR
Trigger: TCGAGACCCAGGAGAGGCCCAGGGATGTCTCCTCTG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCAGAGGAGACATCCCTaGGCCTCTCCTGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKQRRHP*ASPGSR
Trigger: TCGAGACCCAGGAGAGGCCCAGGGATGTCTCCTCTG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCGGTGGCCGCATGGTaGGAAACTGGAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSVAAW*ETGASP
Trigger: AGGGGAGGCTCCAGTTTCCCACCATGCGGCCACCGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCTGCGGAAGCCCAGTaGGAAGGAGGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSAEAQ*EGGWQL
Trigger: GAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCACCAGGGCGGGAACCTaGGGATGTCAGGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGTRAGT*GCQAPS
Trigger: CGATGGAGCCTGACATCCCCAGGTTCCCGCCCTGGT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGTGCAGCTGGCTGCCCTaGACCAGGCCAGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRCSWLP*TRPGDL
Trigger: CAGGTCCCCTGGCCTGGTCCAGGGCAGCCAGCTGCA...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCCTGGTATGCTGGTGTaGACTGGAGCTGTGTCAACC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGPGMLV*TGAVST
Trigger: GGTTGACACAGCTCCAGTCCACACCAGCATACCAGG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCATCTCGCCTCCACCTaGGCTGAGCCTAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLHLAST*AEPSRG
Trigger: ACCCCTACTAGGCTCAGCCCAGGTGGAGGCGAGATG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGCTGCTGCAGGTTCTaGGGCCACGTTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGCCRF*GHVPSS
Trigger: AGAAGAGGGAACGTGGCCTCAGAACCTGCAGCAGCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCTGCCCATCCTTGTGCTaGCCCGGCGGTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPCPSLC*PGGGGC
Trigger: GCAGCCACCACCGCCGGGTCAGCACAAGGATGGGCA...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGCTGTTCAGGACAGTaGTGGTCTGCTCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVGCSGQ*WSARSR
Trigger: CCTGGATCGAGCAGACCATCACTGTCCTGAACAGCC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGGCTGTTCAGGACAGTaGTGGTCTGCTCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKGCSGQ*WSARSR
Trigger: CCTGGATCGAGCAGACCATCACTGTCCTGAACAGCC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAAGATCTGCTCCAGGTaGGCATCCAGCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGKICSR*ASSPRS
Trigger: GCTCCGTGGGCTGGATGCTCACCTGGAGCAGATCTT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGTCACGCTCCAGCCCTaGCAACTTCCTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGVTLQP*QLPLDG
Trigger: GCCATCCAGAGGAAGTTGTCAGGGCTGGAGCGTGAC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCGTCGGTCTCCCGCTTaGGCTGGAACAGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGRRSPA*AGTGGT
Trigger: TGTACCACCTGTTCCAGCTCAAGCGGGAGACCGACG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGTCGGTCTCCCGCTTaGGCTGGAACAGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRRRSPA*AGTGGT
Trigger: TGTACCACCTGTTCCAGCTCAAGCGGGAGACCGACG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGCTTTGTGGGCCACCTaGAGGCTCCTTCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGALWAT*RLLPHA
Trigger: GGCATGAGGAAGGAGCCTTCAGGTGGCCCACAAAGC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGGGGACCTGGGGTGGTaGGATGCTAGCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGGDLGW*DASSST
Trigger: AGTGGAAGAGCTAGCATCTCACCACCCCAGGTCCCC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGCCACATTGAATGCGTaGTCCAGGTTGTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVATLNA*SRLCRA
Trigger: TGCCCGGCACAACCTGGAGCACGCATTCAATGTGGC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGAAGAGCTTCTGCAGTaGCAGGGTGGTCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLEELLQ*QGGLEP
Trigger: AGGCTCGAGACCACCCTGGCACTGCAGAAGCTCTTC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTCCTGGAAGAGCTTCTaGAGTGCCAGGGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLSWKSF*SARVVS
Trigger: CGAGACCACCCTGGCACTGCAGAAGCTCTTCCAGGA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGTGCCCAAACTGCTTaGGCGCAACCATGCCATGAG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVGAQTA*AQPCHE
Trigger: CTCATGGCATGGTTGCGCGCAAGCAGTTTGGGCACC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGTGGCCCCTTCGTCCTaGCCCACATCTTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGVAPSS*PTSSPE
Trigger: CTCTGGTGAAGATGTGGGGCAGGACGAAGGGGCCAC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGCTTCACCTCCCTGCTaGGTGGGTGGCCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGASPPC*VGGHSL
Trigger: TAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCGTCCCAGAGCCGGTaGAGGGCTTCCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSSQSR*RASSFW
Trigger: CCAAAAGCTGGAAGCCCTGCACCGGCTCTGGGACGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGAGGTCAGCATGGGTCTaGAAGCGCAGGTCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRRSAWV*KRRSEL
Trigger: GAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGAAGTCCCGGCTGATCTaGAGCTTGGCTCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGKSRLI*SLALDD
Trigger: ATCATCCAGAGCCAAGCTGCAGATCAGCCGGGACTT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCCCAGAATCTCATTCTaGAGTGTCTGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRPRISF*SVWFFF
Trigger: GAAGAAGAACCAGACACTGCAGAATGAGATTCTGGG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCAGGTAGTACTGCTGTaGCTCGTTGGCGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVQVVLL*LVGVPQ
Trigger: CTGAGGGACGCCAACGAGGCACAGCAGTACTACCTG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGCCTCAGCCTCGTCTaGATCCAGGTAGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVGLSLV*IQVVLL
Trigger: CAGCAGTACTACCTGGATGCAGACGAGGCTGAGGCC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCCTCCACCGCACGCTaGTGCCGCAAATGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSSTAR*CRKCRF
Trigger: GAAGCGACATTTGCGGCAGCAGCGTGCGGTGGAGGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGACGTGGTCAAAGTCTTaGCCCATTTCCGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGTWSKS*PISGEE
Trigger: CTCTTCCCCGGAAATGGGGCAAGACTTTGACCACGT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGAAGGACTCGGCCGTaGTGGCGTCCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGGRTRP*WRPAPR
Trigger: ACGTGGGGCTGGACGCCAGCACGGCCGAGTCCTTCC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCAGCATATGCTGTCTaGAGACGGGTGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRPAYAV*RRVATS
Trigger: GGACGTGGCCACCCGTCTGCAGACAGCATATGCTGG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGCGGCAGACACCTCCTaGTCCTTGTTCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRAADTS*SLFWMA
Trigger: GGCCATCCAGAACAAGGAGCAGGAGGTGTCTGCCGC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGAGGCCCAGTCTCCTCTaGGGGTCTCTCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVRPSLL*GSLCNL
Trigger: CAGATTGCAGAGAGACCCGCAGAGGAGACTGGGCCT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGAACTGGAGCCTCCCCTaGTGTCTCGCCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRNWSLP*CLAFLL
Trigger: GAGGAGGAAGGCGAGACAGCAGGGGAGGCTCCAGTT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTGGGAAGCATGTTGCTaGATTTCTACAGCAACAGAC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRWEACC*ISTATD
Trigger: GTCTGTTGCTGTAGAAATGCAGCAACATGCTTCCCA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGCCTCTCATCCCCAGTaGATTTCTGCCCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGASHPQ*ISAHPC
Trigger: ACAAGGATGGGCAGAAATCCACTGGGGATGAGAGGC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCTTTCTTGCCGAGGCTaGCGTCGGGGCCGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPLSCRG*RRGRRG
Trigger: CCCTCTCCGGCCCCGACGCCAGCCTCGGCAAGAAAG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCATTTTCAAACTCTGTaGCCGATGTCATGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRHFQTL*PMSCQQ
Trigger: CTGCTGACATGACATCGGCCACAGAGTTTGAAAATG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTACCCAAAGTTATCCTaGGCCACGAGGCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEYPKLS*ATRRWF
Trigger: AAACCAGCGCCTCGTGGCCCAGGATAACTTTGGGTA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCCTCATGCTTCTTCTTaGCGGCCTCCACAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLPHASS*RPPQLP
Trigger: TGGCAGCTGTGGAGGCCGCCAAGAAGAAGCATGAGG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTACTCTGGGTCCGTCTaGCCTTGGATCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEYSGSV*PWITFS
Trigger: GGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGGTCTTCTCCTTTGTaGTGGCCTGCAGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGSSPL*WPAARP
Trigger: GGGACGAGCTGCAGGCCACCACAAAGGAGAAGACCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGCAGCCGAGAGGTGCTaGGTCTTCTCCTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKAAERC*VFSFVV
Trigger: CACCACAAAGGAGAAGACCCAGCACCTCTCGGCTGC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCCCATTGAAGGCACCTaGGCAAACAGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGPIEGT*ANSSPS
Trigger: GCTGGGGGAGCTGTTTGCCCAGGTGCCTTCAATGGG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCACTGCTGTGCCTCGTTaGCGTCCCTCAGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGTAVPR*RPSVAA
Trigger: TGCAGCGACTGAGGGACGCCAACGAGGCACAGCAGT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGACTGCTGTGCCTCGTTaGCGTCCCTCAGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRTAVPR*RPSVAA
Trigger: TGCAGCGACTGAGGGACGCCAACGAGGCACAGCAGT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTGGAACTGCTGCACCTaGACACCCAGCAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGWNCCT*TPSRWS
Trigger: GCTCCACCTGCTGGGTGTCCAGGTGCAGCAGTTCCA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTGTCTGCAGACGGGTaGCCACGTCCTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRLSADG*PRPGTA
Trigger: AGCAGTTCCAGGACGTGGCCACCCGTCTGCAGACAG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGAGCGCTCTGCCCAGCTaGCCGTGGACTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLSALPS*PWTSQK
Trigger: CTTTTGAGAAGTCCACGGCCAGCTGGGCAGAGCGCT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCTTTCAGCTCAAGCGTaGTGGGCTTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLSAQA*WASPGQ
Trigger: CTGCCCTGGAGAAGCCCACCACGCTTGAGCTGAAAG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGGGACGTTCTCTCGGTaGCCGCATGGTGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGGTFSR*PHGGKL
Trigger: CAGTTTCCCACCATGCGGCCACCGAGAGAACGTCCC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCAGGCGCCAGAGGAGCTaGGAGCCCCTGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPRRQRS*EPLSLE
Trigger: CTCCAGGGACAGGGGCTCCCAGCTCCTCTGGCGCCT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTTCGGAGTAGAGTGGTaGGGAAAATATGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: PARARAWRGRRPRTRGRRFGVEW*GKYGMS
Trigger: GCTCATTCCATATTTTCCCCACCACTCTACTCCGAA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCTTGACTGCAGGCCCTaGGGACTTTCATGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREELDCRP*GLSWFP
Trigger: AGGAAACCATGAAAGTCCCCAGGGCCTGCAGTCAAG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGGATGTGTGGGGAGCTaGCAACAGAATGGTCACATG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEGCVGS*QQNGHM
Trigger: CATGTGACCATTCTGTTGCCAGCTCCCCACACATCC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCCTGGGAAGGAAGCCTaGTATGCTGGTGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVPGKEA*YAGVDW
Trigger: CCAGTCCACACCAGCATACCAGGCTTCCTTCCCAGG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTCCTCTAAACTGCCCTaGGAAGGAAGCCTGGTATGC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESSKLP*EGSLVC
Trigger: GCATACCAGGCTTCCTTCCCAGGGCAGTTTAGAGGA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGCCATGTGGTCCCGCTaGCTTCATCCTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKAMWSR*LHPPLD
Trigger: ATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGAGCCACCAAGCCATGTaGTCCCGCTGGCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSHQAM*SRWLHP
Trigger: AGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGTGGCTGCAGGGATGTaGGGAGGATGGAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGVAAGM*GGWRAG
Trigger: CCCCGCCCTCCATCCTCCCCACATCCCTGCAGCCAC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGTTTCACGACCTTCCTaGGTTTGGACCACAATGTCC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGVSRPS*VWTTMS
Trigger: GGACATTGTGGTCCAAACTCAGGAAGGTCGTGAAAC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGACAAGAGGTGAGCCTTaGTCTCATCCATCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREETRGEP*SHPSSR
Trigger: TCGACTGGATGGATGAGATCAAGGCTCACCTCTTGT...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCCCTCCTCTCCCATTaGAGGCACCTGGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSLLSH*RHLGKQ
Trigger: CTGTTTGCCCAGGTGCCTTCAATGGGAGAGGAGGGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGATCTCATCGGAGATaGCGTAGAGCTCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGSHRR*RRAPAR
Trigger: GCGAGCAGGAGCTCTACGTCATCTCCGATGAGATCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGGCTGGCCAGCTGCTTaGTGTTCCGGCCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRGWPAA*CSGRSP
Trigger: AGGACTACGGCCGGAACATCAAGCAGCTGGCCAGCC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGGTCACGGGCCATGCTaGAGAAGCGGAATTTATCCG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLGHGPC*RSGIYP
Trigger: CGGATAAATTCCGCTTCTTCAGCATGGCCCGTGACC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTCTCGATCTGCCGGATaGTGCTCTCCATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSRSAG*CSPSRR
Trigger: TCTCCTGGATGGAGAGCATCATCCGGCAGATCGAGA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGACAGCCAGAGTCAGTTaGGGCTGGGACAAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKTARVS*GWDKGE
Trigger: TTCCCCTTTGTCCCAGCCTCAACTGACTCTGGCTGT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCTTAGCAGCTCCGCCTaGCTCAGTCTTCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLSSSA*LSLHGR
Trigger: CCTTCCATGAAGACTGAGGCAGGCGGAGCTGCTAAG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCTCAGCCACATTGAATaGGTGCTCCAGGTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVLSHIE*VLQVVP
Trigger: CGGCACAACCTGGAGCACGCATTCAATGTGGCTGAG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGTCTCGATGGCCTCATaGTTCTTCTTGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRVSMAS*FFLAAS
Trigger: GGAGGCCGCCAAGAAGAAGCATGAGGCCATCGAGAC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTCAACCTCCAACAAGTaGTTCCCAAACTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESTSNK*FPNSAD
Trigger: GTCTGCCGAGTTTGGGAAGCACTTGTTGGAGGTTGA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGAGCTCCTCAAAGCACTaGTCCAAGTGGCTGATGCGG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSSSKH*SKWLMR
Trigger: CCGCATCAGCCACTTGGAGCAGTGCTTTGAGGAGCT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGGCCTTCCGCCCAGCTaGCATGTTGCTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRGLPPS*HVAQLL
Trigger: GAGGAGCTGAGCAACATGGCAGCTGGGCGGAAGGCC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGAGATGGTCCTGGTACTaGTTCACCTCCCTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLRWSWY*FTSLLR
Trigger: ACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTGGCCCTGCAGGGATTaGTGCAGGCCCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPWPCRD*CRPCHS
Trigger: GCTGTGGCAGGGCCTGCAGCAATCCCTGCAGGGCCA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGGCTCTCCCACATCCTaGCCAGGGCATTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRGSPTS*PGHSSQ
Trigger: CTGGCTGGAATGCCCTGGGCAGGATGTGGGAGAGCC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCACTGGTCAGGTCCTTaGCCGGGTCGTCTGACCGCA +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRHWSGP*PGRLTA
Trigger: TGCGGTCAGACGACCCGGGCAAGGACCTGACCAGTG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCTGTCCCAGGAGCTCTaGAGGTGCCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVELSQEL*RCPRRS
Trigger: GGAGCGCCTGGGGCACCTGCAGAGCTCCTGGGACAG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCAGCCTCCCGGCCGCTaGCTCCCGCAGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVQPPGR*LPQPVP
Trigger: TGGGACAGGCTGCGGGAGGCAGCGGCCGGGAGGCTG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCTTCTCCCCAGCATATaGTGTCTGCAGACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGLLPSI*CLQTGG
Trigger: GCCACCCGTCTGCAGACAGCATATGCTGGGGAGAAG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCCTCTGAGGCCTGGTaGTGCCGCTGCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSSEAW*CRCSRD
Trigger: GTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTCCTCTGAGGCCTGGTaGTGCCGCTGCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPSSEAW*CRCSRD
Trigger: GTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCTGGACATCACCTGCTaGAGTTTCTCGCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLDITC*SFSRIS
Trigger: GGAGATCCGCGAGAAACTGCAGCAGGTGATGTCCAG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCACACCTCCAGCAACATaGGGAGCCGCTCCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPTPPAT*GAAPSG
Trigger: CCCGCTGGGAGCGGCTCCGCATGTTGCTGGAGGTGT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCAGAGAACCGTTTCCTaGCCCCAGGCCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPQRTVS*PQAWRP
Trigger: GGGCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGTGGAACTGATTTCTaGCGGCACTGGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVGGTDF*RHWSAL
Trigger: GAGTGCTGACCAGTGCCGGCAGAAATCAGTTCCACC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATGGAGGGCGGGGCTaGGCCAGCTCATCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEDGGRG*ASSSRL
Trigger: GAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCTGTGCAGCATGTCCTaGAAGAGCTTCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLCSMS*KSFCSA
Trigger: GGCACTGCAGAAGCTCTTCCAGGACATGCTGCACAG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCCAGAGAGCAGCCGGTaGGCGTCTTGCAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPPESSR*ASCSQA
Trigger: GGCTTGGCTGCAAGACGCCCACCGGCTGCTCTCTGG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCCACACGGGCCTGGATaGCGGCCACGTCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEPHGPG*RPRHAP
Trigger: TGGAGCGTGACGTGGCCGCCATCCAGGCCCGTGTGG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGCATCCACACGGGCCTaGATGGCGGCCACGTCACGC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEASTRA*MAATSR
Trigger: GCGTGACGTGGCCGCCATCCAGGCCCGTGTGGATGC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGGGTCCGTCTGGCCTTaGATCACTTTCTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGGSVWP*ITFSPD
Trigger: GTCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAGAGTGTATTCCTaGTTGCTGAGGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEARVYS*LLRMAS
Trigger: TGAAGCCATCCTCAGCAACCAGGAATACACTCTGGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTCTAGCCACCCTTCATaGGAAGCCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLSSHPS*EASSAT
Trigger: TGTGGCAGAGCTGGCTTCCCATGAAGGGTGGCTAGA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTTTCGCACATTCACTTaGTCCTCCACTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGFRTFT*SSTRFS
Trigger: GCTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATCCACTCGGCGATGGTaGCCGCCTCGCTGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSTRRW*PPRCGP
Trigger: CGGGCCACAGCGAGGCGGCCACCATCGCCGAGTGGA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTCCTGCTCCTTGTTCTaGATGGCCTCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLSCSLF*MASAFS
Trigger: GGAGAAGGCAGAGGCCATCCAGAACAAGGAGCAGGA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCTGCCCAGCTGGCCGTaGACTTCTCAAAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKLPSWP*TSQKPH
Trigger: ATGAGGCTTTTGAGAAGTCCACGGCCAGCTGGGCAG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGTACCCTTTGATCTaGGGGGAGAAGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVGYPLI*GEKQRG
Trigger: TCCTCTCTGCTTCTCCCCCCAGATCAAAGGGTACCC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGGGGCCTATGTCTGTTaGATATTGCTGGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGGAYVC*ILLVWL
Trigger: CAGCCAAACCAGCAATATCCAACAGACATAGGCCCC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCATTCCTGGGGACGTTaGTTGCAGAGCTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKHSWGR*LQSFWC
Trigger: GCACCAGAAGCTCTGCAACCAACGTCCCCAGGAATG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCTTTCATGGTTTCCTTaGGGGAAAATGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREELSWFP*GKMPAA
Trigger: GGCAGCAGGCATTTTCCCCCAAGGAAACCATGAAAG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCCTTTCTCGGGTCTGTaGAGTTGCTTGCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGPFSGL*SCLLEM
Trigger: CATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGTTGGTCGAATGTCTTaGAGCCTGGGTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVVGRMS*SLGDRR
Trigger: CCTCCTGTCACCCAGGCTCCAAGACATTCGACCAAC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCCTGGGAAGGAAGCCTaGTATGCTGGTGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGPGKEA*YAGVDW
Trigger: CCAGTCCACACCAGCATACCAGGCTTCCTTCCCAGG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTGGACCACAATGTCCTaGATCTGGAAGCGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLWTTMS*IWKRRM
Trigger: CATCCTCCGCTTCCAGATTCAGGACATTGTGGTCCA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTCTGCTCGATCCAGGTaGGCAGGTCCGAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPSARSR*AGPRLA
Trigger: GGCTAGCCTCGGACCTGCTCACCTGGATCGAGCAGA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGCTTGCGCTGTAAGATaGGCACACTGGTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLACAVR*AHWSGL
Trigger: AAGACCTGACCAGTGTGCTCATCTTACAGCGCAAGC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGAAGATCTGCTCCAGGTaGGCATCCAGCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRKICSR*ASSPRS
Trigger: GCTCCGTGGGCTGGATGCTCACCTGGAGCAGATCTT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGTCCGACACCAGGGTCTaGAATGCCTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRSDTRV*NACHLV
Trigger: CACCAGGTGGCAGGCATTTCAGACCCTGGTGTCGGA...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGAAGTGTTTTTGCCGCTaGCCAATATCCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEKCFCR*PISSFC
Trigger: GCAGAAGGAGGATATTGGTCAGCGGCAAAAACACTT...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCTTGCCCGGGTCGTCTaGCCGCAGCTGGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVELARVV*PQLVLH
Trigger: ATGGAGGACCAGCTGCGGTCAGACGACCCGGGCAAG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCAGTGCCATAGTCGGCTaGCTGGGCCAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPSAIVG*LGQRQP
Trigger: AGGCTGCCTCTGGCCCAGTCAGCCGACTATGGCACT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGGCTGGCCAGCTGCTTaGTGTTCCGGCCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPGWPAA*CSGRSP
Trigger: AGGACTACGGCCGGAACATCAAGCAGCTGGCCAGCC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGTCACGGGCCATGCTaGAGAAGCGGAATTTATCCG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGHGPC*RSGIYP
Trigger: CGGATAAATTCCGCTTCTTCAGCATGGCCCGTGACC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACTCGCGGATCTCCTCTaGGGCCTGGTGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGLADLL*GLVLPL
Trigger: CAGCGGCAGCACCAGGCCTCAGAGGAGATCCGCGAG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCCACCAGGTGGGAGGTaGCCCGAAGCAAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRPPGGR*PEARLA
Trigger: AGCAAGTCTTGCTTCGGGTCACCTCCCACCTGGTGG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCCTGTGGCTTCTACCTaGACCTCACCCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVPVAST*TSPTSS
Trigger: AGATGAAGTGGGTGAGGTTCAGGTAGAAGCCACAGG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCTCACTTCAGGTGCTaGTTTGGCACACGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRPHFRC*FGTRGR
Trigger: CCTTCCACGTGTGCCAAATCAGCACCTGAAGTGAGG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGTGGTGGAAGCACGGTTaGGCAGGTGGAGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRWWKHG*AGGGQD
Trigger: GTCCTGTCCTCCACCTGCTCAACCGTGCTTCCACCA...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGAAGAGCCACTCGCTaGCATTACTCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGRATR*HYSASA
Trigger: AGCTGAGGCTGAGTAATGGCAGCGAGTGGCTCTTCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCTCCTCCTCATCCTTaGCATGGAAGAGCCACTCGC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSPPHP*HGRATR
Trigger: GCGAGTGGCTCTTCCATGGCAAGGATGAGGAGGAGA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGGCAGGGGCAGGCTCTaGGCCTTGACGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGGRGRL*ALTRML
Trigger: GAGCATCCGCGTCAAGGCGCAGAGCCTGCCCCTGCC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCTTAGCAGCTCCGCCTaGCTCAGTCTTCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGLSSSA*LSLHGR
Trigger: CCTTCCATGAAGACTGAGGCAGGCGGAGCTGCTAAG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTTAGCAGCTCCGCCTaGCTCAGTCTTCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRLSSSA*LSLHGR
Trigger: CCTTCCATGAAGACTGAGGCAGGCGGAGCTGCTAAG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGAGGACAGTGATGGTCTaGTCGATCCAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRRTVMV*SIQVSR
Trigger: CCTGCTCACCTGGATCGAGCAGACCATCACTGTCCT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGAAGCGCCGGGCCAGTTaGTCTAGCTTCTCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRKRRAS*SSFSCR
Trigger: TCGGCAGGAGAAGCTAGAGCAACTGGCCCGGCGCTT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCACTGGTCAGGTCTTTaGCATAGTCCAGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGHWSGL*HSPGKN
Trigger: ATTCTTCCCTGGACTATGGCAAAGACCTGACCAGTG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGAGCCGGTGGGCGTCTTaGAGCCAAGCCTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRSRWAS*SQAFRS
Trigger: TGACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGTGCGAGTCCATCAGCTaGTGGGACTCACGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRCESIS*WDSRSR
Trigger: CCTGGAGCGTGAGTCCCAGCAGCTGATGGACTCGCA...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCCTTGATACCTGCATaGTGCTGCAGGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSLIPA*CCRSCS
Trigger: TGAGCAGCTCCTGCAGCAGCATGCAGGTATCAAGGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGAAGTCCCGGCTGATCTaGAGCTTGGCTCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKKSRLI*SLALDD
Trigger: ATCATCCAGAGCCAAGCTGCAGATCAGCCGGGACTT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGCCTCCACCAGCTGCTaGCCTCTCTGCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGASTSC*PLCSTS
Trigger: GGATGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGCCTCCACCAGCTGCTaGCCTCTCTGCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPASTSC*PLCSTS
Trigger: GGATGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACAGCCTCCCGGCCGCTaGCTCCCGCAGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSQPPGR*LPQPVP
Trigger: TGGGACAGGCTGCGGGAGGCAGCGGCCGGGAGGCTG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCACGTCCTTCAGCCCTaGGTAGTGCTTGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRHVLQP*VVLVHL
Trigger: CAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCACGTCCTTCAGCCCTaGGTAGTGCTTGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGHVLQP*VVLVHL
Trigger: CAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGACGCTCGAAGGCTGTGTaGACCCGGTGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGRSKAV*TRWKDS
Trigger: CGAGTCCTTCCACCGGGTGCACACAGCCTTCGAGCG...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGCCACGTCCTGGAACTaGTGCACCTGGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGATSWN*CTWTPS
Trigger: GCTGGGTGTCCAGGTGCAGCAGTTCCAGGACGTGGC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGCATCGAGCAGCGCCTaGCACGCGGCAGACACCTCC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGASSSA*HAADTS
Trigger: GGAGGTGTCTGCCGCGTGGCAGGCGCTGCTCGATGC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCTGGACATCACCTGCTaGAGTTTCTCGCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGLDITC*SFSRIS
Trigger: GGAGATCCGCGAGAAACTGCAGCAGGTGATGTCCAG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTGGACATCACCTGCTaGAGTTTCTCGCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRLDITC*SFSRIS
Trigger: GGAGATCCGCGAGAAACTGCAGCAGGTGATGTCCAG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGACACCTCCAGCAACATaGGGAGCCGCTCCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVETPPAT*GAAPSG
Trigger: CCCGCTGGGAGCGGCTCCGCATGTTGCTGGAGGTGT...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCAGCAAAGCGCTCTaGCCAGCTGGCCGTGGACTT +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGGSKAL*PAGRGL
Trigger: AAGTCCACGGCCAGCTGGGCAGAGCGCTTTGCTGCC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCTCTGCGGGTCTCTCTaGAATCTGGCGTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVLCGSL*NLAFFQ
Trigger: CTGAAAGAACGCCAGATTGCAGAGAGACCCGCAGAG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGTCTGTGGAGTTGCTTaGTGGAAATGCCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEVCGVA*WKCLTS
Trigger: TGAAGTGAGGCATTTCCAGCAAGCAACTCCACAGAC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCGGGTCTGTGGAGTTaGTTGCTGGAAATGCCTCAC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSGLWS*LLEMPH
Trigger: GTGAGGCATTTCCAGCAAGCAACTCCACAGACCCGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGCCTCTCATCCCCAGTaGATTTCTGCCCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVASHPQ*ISAHPC
Trigger: ACAAGGATGGGCAGAAATCCACTGGGGATGAGAGGC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCCTCATCCTTGCCATaGAAGAGCCACTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSSSLP*KSHSLP
Trigger: TGGCAGCGAGTGGCTCTTCCATGGCAAGGATGAGGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCGGTCCTGGATGACCTaGGGGTCACAAGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRRSWMT*GSQGWY
Trigger: GTACCAGCCTTGTGACCCCCAGGTCATCCAGGACCG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTCATCCGCATCGCCCTaGAACTGGAAAAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESSASP*NWKKFS
Trigger: TGAGAACTTTTTCCAGTTCCAGGGCGATGCGGATGA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCTTCGGGGAATCCCTaGGCCTGCTGCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSSGNP*ACCSRC
Trigger: GCACCTGGAGCAGCAGGCCCAGGGATTCCCCGAAGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCACCTGGTGTTCAGATaGTCCTGGTACTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLHLVFR*SWYCFT
Trigger: GGTGAAGCAGTACCAGGACCATCTGAACACCAGGTG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTTGTTGAGGTCAGCATaGGTCTGCAAGCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRLLRSA*VCKRRS
Trigger: CGACCTGCGCTTGCAGACCCATGCTGACCTCAACAA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCAACCCGCGGCGTATaGCCCAGAATCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSTRGV*PRISFC
Trigger: GCAGAATGAGATTCTGGGCCATACGCCGCGGGTTGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGTGTTCCCCCTCAGGGTaGCCTGCAGACAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVECSPSG*PADSRP
Trigger: GGGCCTGCTGTCTGCAGGCCACCCTGAGGGGGAACA...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGCATCCCTCGAGAACTaGCACACCTCCAGCAACATG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRASLEN*HTSSNM
Trigger: CATGTTGCTGGAGGTGTGCCAGTTCTCGAGGGATGC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCGCATGGTGGGAAACTaGAGCCTCCCCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRRMVGN*SLPCCL
Trigger: GAGACAGCAGGGGAGGCTCCAGTTTCCCACCATGCG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCTGGCTGCCACCAGGTaGGAGGTGACCCGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPLAATR*EVTRSK
Trigger: CTTGCTTCGGGTCACCTCCCACCTGGTGGCAGCCAG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTGGATATTGCTGGTTTaGCTGCCACTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRWILLV*LPLGVG
Trigger: CCCCACTCCCAGTGGCAGCCAAACCAGCAATATCCA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGGGGAAGGCCATTCCTaGGGACGTTGGTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRGEGHS*GRWLQS
Trigger: GCTCTGCAACCAACGTCCCCAGGAATGGCCTTCCCC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGATTTCTGCCGGCACTaGTCAGCACTCAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRDFCRH*SALRVP
Trigger: AGGAACCCTGAGTGCTGACCAGTGCCGGCAGAAATC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTTCAGGTGCTGATTTaGCACACGTGGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRLQVLI*HTWKGE
Trigger: CTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTCCTCTAAACTGCCCTaGGAAGGAAGCCTGGTATGC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSSKLP*EGSLVC
Trigger: GCATACCAGGCTTCCTTCCCAGGGCAGTTTAGAGGA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAAAAACTAGTAAATaGGTTTCCTCTGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAARKTSK*VSSGWW
Trigger: CCACCAACCAGAGGAAACCCATTTACTAGTTTTTCT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGTTTCACGACCTTCCTaGGTTTGGACCACAATGTCC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLVSRPS*VWTTMS
Trigger: GGACATTGTGGTCCAAACTCAGGAAGGTCGTGAAAC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGTCTGCTCGATCCAGGTaGGCAGGTCCGAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVESARSR*AGPRLA
Trigger: GGCTAGCCTCGGACCTGCTCACCTGGATCGAGCAGA...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGGTGTGTACACTTTCTaGTTGTTGGCTCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLGVYTF*LLALIR
Trigger: CCGGATGAGAGCCAACAATCAGAAAGTGTACACACC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGGTGTGTACACTTTCTaGTTGTTGGCTCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKGVYTF*LLALIR
Trigger: CCGGATGAGAGCCAACAATCAGAAAGTGTACACACC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCTGCTCCTTCTCCTTaGTCCAGCTCTCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSAPSP*SSSQPH
Trigger: ATGAGGCTGAGAGCTGGATCAAGGAGAAGGAGCAGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTCCTGCAGCCTCTGCTaGCGCAGGTCCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNSCSLC*RRSAWA
Trigger: GGCCCAGGCGGACCTGCGTCAGCAGAGGCTGCAGGA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCTTTGTCTTGTCCGTaGTCCACTTGCTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRPLSCP*STCWSP
Trigger: AGGAGACCAGCAAGTGGATCACGGACAAGACAAAGG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGTCACGCTCCAGCCCTaGCAACTTCCTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGVTLQP*QLPLDG
Trigger: GCCATCCAGAGGAAGTTGTCAGGGCTGGAGCGTGAC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAGCTTGGCTCTGGATaGTTCCAGCTGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRQLGSG*FQLLLP
Trigger: AGGAAGAAGCAGCTGGAATCATCCAGAGCCAAGCTG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCGTCGGTCTCCCGCTTaGGCTGGAACAGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPRRSPA*AGTGGT
Trigger: TGTACCACCTGTTCCAGCTCAAGCGGGAGACCGACG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCCTGGTGATACTTCATaGGCAGTTCCACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLPGDTS*AVPQRR
Trigger: TCTCCTCTGTGGAACTGCTCATGAAGTATCACCAGG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCCTGGTGATACTTCATaGGCAGTTCCACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKPGDTS*AVPQRR
Trigger: TCTCCTCTGTGGAACTGCTCATGAAGTATCACCAGG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGCATTGATGCCCTGGTaGTACTTCATGAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKALMPW*YFMSSS
Trigger: GGAACTGCTCATGAAGTATCACCAGGGCATCAATGC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGTCGCCTTCCTCCTCTTaGGGCCCAGTCTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVESPSSS*GPVSSA
Trigger: CGCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGA...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCACCTCTGTACTCATGTaGCCCCCTCCCCGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPTSVLM*PPPRQD
Trigger: GTCTTGGCGGGGAGGGGGTCACATGAGTACAGAGGT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGCCACAGGGTGGAACTaGTTTCTGCCGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPATGWN*FLPALV
Trigger: GACCAGTGCCGGCAGAAATCAGTTCCACCCTGTGGC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCCAGGTGTACACGCTaGTCCTTGAGGAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSRCTR*SLRNWR
Trigger: TCTCCAGTTCCTCAAGGAGCAGCGTGTACACCTGGA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCCAGGTCTCTCTCATTaGGGCCTTCCGGTCAAAGCG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRPGLSH*GLPVKA
Trigger: CGCTTTGACCGGAAGGCCGCAATGAGAGAGACCTGG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGAACTTCAGGGTGGCTaGGGTGATGGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRELQGG*GDGLHF
Trigger: AAAGTGAAGGCCATCACCGCAGCCACCCTGAAGTTC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAATGCGGGCCTCGATCTaGGGGTGCCCAAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGMRASI*GCPNCL
Trigger: CAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCAT...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCAATCCCTGGGCCTGCTaGTCCAGGTGCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPNPWAC*SRCSIT
Trigger: GGTGATGGAGCACCTGGAGCAGCAGGCCCAGGGATT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGGAACCGCTTCTCGATaGTCAAGTCTGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGGTASR*SSLHLL
Trigger: GAGGAGATGCAGACTTGAGCATCGAGAAGCGGTTCC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAAGCTGCTGCCCTCTCTaGAGCACATCCTCAACCCGC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSCCPL*STSSTR
Trigger: GCGGGTTGAGGATGTGCTGCAGAGAGGGCAGCAGCT...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGCGTCCCTCAGTCGCTaGAGCCTCCCGGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPASLSR*SLPAAA
Trigger: GGCAGCGGCCGGGAGGCTGCAGCGACTGAGGGACGC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCCTCCACCGCACGCTaGTGCCGCAAATGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSSTAR*CRKCRF
Trigger: GAAGCGACATTTGCGGCAGCAGCGTGCGGTGGAGGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTTTTCTGAAATCCACTaGTCCAGGTCGTCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVFSEIH*SRSSVS
Trigger: GGAGACCGACGACCTGGAGCAGTGGATTTCAGAAAA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATCGGGCAGCTCGCGGTaGTTCTCGTCGATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSGSSR*FSSMRP
Trigger: GGGCCTCATCGACGAGAAGCACCGCGAGCTGCCCGA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGCGGCAGACACCTCCTaGTCCTTGTTCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGAADTS*SLFWMA
Trigger: GGCCATCCAGAACAAGGAGCAGGAGGTGTCTGCCGC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGGCCTGGTGCTGCCGCTaGAGCAGGGACTCGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVAWCCR*SRDSPS
Trigger: GCTTGGCGAGTCCCTGCTGCAGCGGCAGCACCAGGC...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTTCCTTGGGGGAAAATaGCTGCTGCCCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPFLGGK*LLPSAL
Trigger: GAGGGCGGAGGGCAGCAGGCATTTTCCCCCAAGGAA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGAGAGGAGGACATGCCTaGAAGTGCACCAAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRRGGHA*KCTKGL
Trigger: TAGGCCTTTGGTGCACTTGCAGGCATGTCCTCCTCT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCATTTTCAAACTCTGTaGCCGATGTCATGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEHFQTL*PMSCQQ
Trigger: CTGCTGACATGACATCGGCCACAGAGTTTGAAAATG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGATCCTGCTGTAAGGTaGCTGGTTGCCCACATTTTC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKDPAVR*LVAHIF
Trigger: GAAAATGTGGGCAACCAGCCACCTTACAGCAGGATC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCTCTCATCCGGGACTaGATGGTAAAAAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEALIRD*MVKSRT
Trigger: AGTTCTACTTTTTACCATCCAGTCCCGGATGAGAGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAAGGGCCTGCAGCCGATaGGTCACATCTGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGRACSR*VTSGES
Trigger: GGATTCCCCAGATGTGACCCATCGGCTGCAGGCCCT...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGAAGGTCTTCATCTCCTaGTCCAGGATGTCGAACCTG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLKVFIS*SRMSNL
Trigger: CAGGTTCGACATCCTGGACCAGGAGATGAAGACCTT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCCCTGCTGCGTGGGTaGCCACTCTCTACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSLLRG*PLSTKL
Trigger: CAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGACACCTCCCTGCTGCGTaGGTGGCCACTCTCTACCAA +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGHLPAA*VATLYQ
Trigger: TTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTG...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGAAATGCCTGCCACCTaGTGTTCAGATGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWREMPAT*CSDGPG
Trigger: ACCAGGACCATCTGAACACCAGGTGGCAGGCATTTC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGCCCCAGGTCTTTTGTaGACTCCACTACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVAPGLL*TPLPLS
Trigger: AGACAAAGGTAGTGGAGTCCACAAAAGACCTGGGGC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCTGACAACTTCCTCTaGATGGCGATGATACCTGCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRPDNFL*MAMIPA
Trigger: GGCAGGTATCATCGCCATCCAGAGGAAGTTGTCAGG...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCAGAAGCAGATACTCTaGGTCCGTCTGGCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGQKQIL*VRLALD
Trigger: ATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTCTGCCACAAACGCCTaGTGCTTTAGCCATTTATTG +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESATNA*CFSHLL
Trigger: CAATAAATGGCTAAAGCACCAGGCGTTTGTGGCAGA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGACCAGGGCTGTAAACTaGGGCTTCTCATCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRTRAVN*GFSSIS
Trigger: GCTGATGGATGAGAAGCCCCAGTTTACAGCCCTGGT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGAGGGCTTCCAGCTTTTaGGACACCAGGGCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRRASSF*DTRAVN
Trigger: GTTTACAGCCCTGGTGTCCCAAAAGCTGGAAGCCCT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGGTCTTCTCCTTTGTaGTGGCCTGCAGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGGSSPL*WPAARP
Trigger: GGGACGAGCTGCAGGCCACCACAAAGGAGAAGACCC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGCAGCCGAGAGGTGCTaGGTCTTCTCCTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRAAERC*VFSFVV
Trigger: CACCACAAAGGAGAAGACCCAGCACCTCTCGGCTGC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTTTCGCACATTCACTTaGTCCTCCACTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLFRTFT*SSTRFS
Trigger: GCTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTTTCGCACATTCACTTaGTCCTCCACTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKFRTFT*SSTRFS
Trigger: GCTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGTCTCCCGCTTGAGCTaGAACAGGTGGTACATGTTC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRVSRLS*NRWYMF
Trigger: GAACATGTACCACCTGTTCCAGCTCAAGCGGGAGAC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCCTTCCACTCGGCGATaGTGGCCGCCTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEPSTRR*WPPRCG
Trigger: GCCACAGCGAGGCGGCCACCATCGCCGAGTGGAAGG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCCTTCCACTCGGCGATaGTGGCCGCCTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVPSTRR*WPPRCG
Trigger: GCCACAGCGAGGCGGCCACCATCGCCGAGTGGAAGG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTGCCGTGTCCACTAGCTaGGTCCGGCGCCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIAVSTS*VRRPAQ
Trigger: CTGTGCCGGGCGCCGGACCCAGCTAGTGGACACGGC...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGGGTCTCTCTGCAATCTaGCGTTCTTTCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLGLSAI*RSFSSS
Trigger: GCTTGAGCTGAAAGAACGCCAGATTGCAGAGAGACC...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGTCTCTCTGCAATCTaGCGTTCTTTCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVGLSAI*RSFSSS
Trigger: GCTTGAGCTGAAAGAACGCCAGATTGCAGAGAGACC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCGCATGGTGGGAAACTaGAGCCTCCCCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPRMVGN*SLPCCL
Trigger: GAGACAGCAGGGGAGGCTCCAGTTTCCCACCATGCG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGTTTTCAATGAGGAATaGTCTGACCTTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGVFNEE*SDLAAL
Trigger: AAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAAC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCCTTTCTCGGGTCTGTaGAGTTGCTTGCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVPFSGL*SCLLEM
Trigger: CATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGAGGGTCTCCCAAAGCTaGATGCCTGCATTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKRVSQS*MPAFSV
Trigger: GACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGAGGGTCTCCCAAAGCTaGATGCCTGCATTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVRVSQS*MPAFSV
Trigger: GACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGACCTTGCTAGGGCACTaGGAGAGCTTAGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRTLLGH*ESLALV
Trigger: CACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAGGT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 72 bp TTGGCTGCCACTGGGAGTGGGGCGAGGGTCCCAGCATaGAGAGGGAGAGCCTTAGGCAGTGTTGTGACGCAC +
Preference number: 4 (lower is better)
Translates to: LAATGSGARVPA*RGRALGSVVTH
Trigger: GTGCGTCACAACACTGCCTAAGGCTCTCCCTCTCAATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 72 bp CCCGTAGGGGGCCTATGTCTGTTGGATATTGCTGGTTaGGCTGCCACTGGGAGTGGGGCGAGGGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PVGGLCLLDIAG*AATGSGARVPA
Trigger: TGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAACAGACATAGGCCCCCTACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 72 bp GGGGGCCCACACTGTCCCGTAGGGGGCCTATGTCTGTaGGATATTGCTGGTTTGGCTGCCACTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GGPHCPVGGLCL*DIAGLAATGSG
Trigger: CCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAACAGACATAGGCCCCCTACGGGACAGTGTGGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTTAGCTCACTGTTCCTaGGCACACAGTACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVLAHCS*AHSTGC
Trigger: ACAACCTGTACTGTGTGCTCAGGAACAGTGAGCTAA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTTTCCCAGGCCCTGTTaGTGTCAGACACTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRFPRPC*CQTLVS
Trigger: GGAAACTAGTGTCTGACATCAACAGGGCCTGGGAAA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCGCGCAACCATGCCATaGGCCTCCTGGAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVERATMP*ASWKIC
Trigger: GCAGATCTTCCAGGAGGCTCATGGCATGGTTGCGCG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCCTGCAGCCTCTGCTaGCGCAGGTCCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSCSLC*RRSAWA
Trigger: GGCCCAGGCGGACCTGCGTCAGCAGAGGCTGCAGGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAAGGCCTGCAGCTGGCTaGCTTCCCCCAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGRPAAG*LPPASP
Trigger: AGGACTTGCTGGGGGAAGTCAGCCAGCTGCAGGCCT...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGCTGCACCTTCTCCTTaGTCTTGTCTGAGTATAGGT +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKAAPSP*SCLSIG
Trigger: ACCTATACTCAGACAAGATCAAGGAGAAGGTGCAGC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTCTGGTTCTTCTTCATaGACAGTTGCACAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESGSSS*TVAQFA
Trigger: TGCAAACTGTGCAACTGTTCATGAAGAAGAACCAGA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGCATTGATGCCCTGGTaGTACTTCATGAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRALMPW*YFMSSS
Trigger: GGAACTGCTCATGAAGTATCACCAGGGCATCAATGC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTTTCAATCTCTGCATTaGTGCCCTGGTGATACTTCA +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREEFQSLH*CPGDTS
Trigger: TGAAGTATCACCAGGGCATCAATGCAGAGATTGAAA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTGTACCAAAGCCAAATaGAGACCTTGCTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRCTKAK*RPCSPG
Trigger: CCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGACAGAAAGAGGCTGGTaGGTGATACACACTAGGTTC +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVTERGW*VIHTRF
Trigger: GAACCTAGTGTGTATCACTCACCAGCCTCTTTCTGT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTCCATCTGCACACTCTaGCCATGGTCCCGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVSICTL*PWSRGA
Trigger: GGCCCCGCGGGACCATGGGCAGAGTGTGCAGATGGA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGACCAGGCGGTGGTTaGCATCTACAATGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGGPGGG*HLQCRG
Trigger: CCCACGACATTGTAGATGGCAACCACCGCCTGGTCC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGGACCAGGCGGTGGTTaGCATCTACAATGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPGPGGG*HLQCRG
Trigger: CCCACGACATTGTAGATGGCAACCACCGCCTGGTCC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGCCACATTGAATGCGTaGTCCAGGTTGTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPATLNA*SRLCRA
Trigger: TGCCCGGCACAACCTGGAGCACGCATTCAATGTGGC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTCAACCTCCAACAAGTaGTTCCCAAACTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRSTSNK*FPNSAD
Trigger: GTCTGCCGAGTTTGGGAAGCACTTGTTGGAGGTTGA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGCTTGCGCGCAACCATaGCATGAGCCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGACAQP*HEPPGR
Trigger: TCTTCCAGGAGGCTCATGGCATGGTTGCGCGCAAGC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGCCTCGATCTGCGGGTaGCCAAACTGCTTGCGCGCA +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGASICG*PNCLRA
Trigger: TGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCCGACACCTCCTTTATaGGGGCCTCGATCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEPTPPL*GPRSAG
Trigger: ACCCGCAGATCGAGGCCCGCATAAAGGAGGTGTCGG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGTGCGAGTCCATCAGCTaGTGGGACTCACGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVECESIS*WDSRSR
Trigger: CCTGGAGCGTGAGTCCCAGCAGCTGATGGACTCGCA...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGCCCTGCAGGGATTaGTGCAGGCCCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEWPCRD*CRPCHS
Trigger: GCTGTGGCAGGGCCTGCAGCAATCCCTGCAGGGCCA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGTTGATACCTGCATGCTaGTGCAGGAGCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRLIPAC*CRSCSA
Trigger: GGCTGAGCAGCTCCTGCAGCAGCATGCAGGTATCAA...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCAGCCTCCCGGCCGCTaGCTCCCGCAGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDQPPGR*LPQPVP
Trigger: TGGGACAGGCTGCGGGAGGCAGCGGCCGGGAGGCTG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCAGGTAGTACTGCTGTaGCTCGTTGGCGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPQVVLL*LVGVPQ
Trigger: CTGAGGGACGCCAACGAGGCACAGCAGTACTACCTG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGCCCCTCAGGGTGGCCTaGAGACAGCAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEPLRVA*RQQALG
Trigger: GCCCAGGGCCTGCTGTCTGCAGGCCACCCTGAGGGG...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCCGGGTTTCAATCTCTaGATTGATGCCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVPGFNL*IDALVI
Trigger: TATCACCAGGGCATCAATGCAGAGATTGAAACCCGG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTCTGAGGCCTGGTGCTaGCGCTGCAGCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVSEAWC*RCSRDS
Trigger: CGAGTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGACACCTCCAGCAACATaGGGAGCCGCTCCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVTPPAT*GAAPSG
Trigger: CCCGCTGGGAGCGGCTCCGCATGTTGCTGGAGGTGT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGTCTGTGGAGTTGCTTaGTGGAAATGCCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKVCGVA*WKCLTS
Trigger: TGAAGTGAGGCATTTCCAGCAAGCAACTCCACAGAC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTGCACACTCTGCCCATaGTCCCGCGGGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGCTLCP*SRGAGS
Trigger: GCTGCCGGCCCCGCGGGACCATGGGCAGAGTGTGCA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCCAGGGCCAGGTTCTTaGCATCCTTGTAGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGPGPGS*HPCRRL
Trigger: TAACCTTCTACAAGGATGCCAAGAACCTGGCCCTGG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGACACTTTCTGATTGTTaGCTCTCATCCGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVTLSDC*LSSGTG
Trigger: TCCAGTCCCGGATGAGAGCCAACAATCAGAAAGTGT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCCTCATGCTTCTTCTTaGCGGCCTCCACAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPPHASS*RPPQLP
Trigger: TGGCAGCTGTGGAGGCCGCCAAGAAGAAGCATGAGG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGTGGTCTCGAGCCTCTaGCGCCGGGACTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNVVSSL*RRDCSS
Trigger: GCTGCTGCAGTCCCGGCGCCAGAGGCTCGAGACCAC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGTCCTCCAGGGTGTCTaGCATTTCCATCTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGVLQGV*HFHLGQ
Trigger: CTGGCCGAGATGGAAATGCCAGACACCCTGGAGGAC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGTCCTCCAGGGTGTCTaGCATTTCCATCTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPVLQGV*HFHLGQ
Trigger: CTGGCCGAGATGGAAATGCCAGACACCCTGGAGGAC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTCCACACGGGCCTGGATaGCGGCCACGTCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIPHGPG*RPRHAP
Trigger: TGGAGCGTGACGTGGCCGCCATCCAGGCCCGTGTGG...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCTGCAGCTTGGCTCTaGATGATTCCAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSAAWL*MIPAAS
Trigger: AGAAGCAGCTGGAATCATCCAGAGCCAAGCTGCAGA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGACTGCTGTGCCTCGTTaGCGTCCCTCAGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVETAVPR*RPSVAA
Trigger: TGCAGCGACTGAGGGACGCCAACGAGGCACAGCAGT...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCGCAGAAGAGTCACGTaGTCAAAGTCTTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGRRRVT*SKSCPI
Trigger: AATGGGGCAAGACTTTGACCACGTGACTCTTCTGCG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGTCCACTCGGCGATGGTaGCCGCCTCGCTGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGESTRRW*PPRCGP
Trigger: CGGGCCACAGCGAGGCGGCCACCATCGCCGAGTGGA...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTAGGACTCGGCCGTGCTaGCGTCCAGCCCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIRTRPC*RPAPRP
Trigger: AGGACGTGGGGCTGGACGCCAGCACGGCCGAGTCCT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTCATCTCTTTCCTCCTaGACATCACCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSSLSS*TSPAAV
Trigger: AACTGCAGCAGGTGATGTCCAGGAGGAAAGAGATGA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCTGCCCAGCTGGCCGTaGACTTCTCAAAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRLPSWP*TSQKPH
Trigger: ATGAGGCTTTTGAGAAGTCCACGGCCAGCTGGGCAG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCAGCGCTCTGCCCAGCTaGCCGTGGACTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPSALPS*PWTSQK
Trigger: CTTTTGAGAAGTCCACGGCCAGCTGGGCAGAGCGCT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACTGATTTGGCACACGTaGAAGGGGGAGGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGLIWHT*KGEGGP
Trigger: GGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGACGCTGTGGGGAGGAGTaGAGGAGGCTAGTACTCTCA +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGRCGEE*RRLVLS
Trigger: TGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCG...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
3UTR CAA 72 bp CTGATTTGGCACACGTGGAAGGGGGAGGGTGGGCCCTaGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LIWHTWKGEGGP*SLGSLKTGPGK
Trigger: TTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 72 bp CTCTGCAGCCGCCGCCTCCTCATTTCCTCCCTGAGCTaGTTTGTCCAAGCCACCAAGCCATGTGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LCSRRLLISSLS*FVQATKPCGPA
Trigger: AGCGGGACCACATGGCTTGGTGGCTTGGACAAACAAGCTCAGGGAGGAAATGAGGAGGCGGCGGCTGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 72 bp GCCAGCCCCAGATTGCATGGTCTGTGCCCAACAGGGTaGCATTCCTCTGCAGCCGCCGCCTCCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: ASPRLHGLCPTG*HSSAAAASSFP
Trigger: AGGAAATGAGGAGGCGGCGGCTGCAGAGGAATGCAACCCTGTTGGGCACAGACCATGCAATCTGGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGGCTGCTGCAGGTTCTaGGGCCACGTTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGGCCRF*GHVPSS
Trigger: AGAAGAGGGAACGTGGCCTCAGAACCTGCAGCAGCC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGAGTTCACCCATTTCGTaGAGGTCTTTTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: PARDSTHLDSTGGRRREESSPIS*RSFSEQ
Trigger: TTGTTCAGAAAAAGACCTTCACGAAATGGGTGAACT...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGGCGCTCAGCCACATTaGATGCGTGCTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEGAQPH*MRAPGC
Trigger: ACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGGTCGAGGAGCGGGATaGTGCCCAGCTGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEGRGAG*CPAGAQ
Trigger: CTGAGCGCCAGCTGGGCATCATCCCGCTCCTCGACC...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGGTCGAGGAGCGGGATaGTGCCCAGCTGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGGRGAG*CPAGAQ
Trigger: CTGAGCGCCAGCTGGGCATCATCCCGCTCCTCGACC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGGTCGAGGAGCGGGATaGTGCCCAGCTGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPGRGAG*CPAGAQ
Trigger: CTGAGCGCCAGCTGGGCATCATCCCGCTCCTCGACC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACGGTGCGGTAGGTGCTaGAGGCCTGCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSRCGRC*RPAAAA
Trigger: AGCAGCAGCTGCAGGCCTTCAGCACCTACCGCACCG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGACCCTTTCCCCTCGGTaGACTTCAGGGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVTLSPR*TSGWLR
Trigger: CCGCAGCCACCCTGAAGTTCACCGAGGGGAAAGGGT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGAGGCCTGCAGCTGGCTaGCTTCCCCCAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEERPAAG*LPPASP
Trigger: AGGACTTGCTGGGGGAAGTCAGCCAGCTGCAGGCCT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGCTGCACCTTCTCCTTaGTCTTGTCTGAGTATAGGT +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGAAPSP*SCLSIG
Trigger: ACCTATACTCAGACAAGATCAAGGAGAAGGTGCAGC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCAGCTTGGCTCTGGATaGTTCCAGCTGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRQLGSG*FQLLLP
Trigger: AGGAAGAAGCAGCTGGAATCATCCAGAGCCAAGCTG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGGATCTCATCGGAGATaGCGTAGAGCTCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEGSHRR*RRAPAR
Trigger: GCGAGCAGGAGCTCTACGTCATCTCCGATGAGATCC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCTTCCTCCAGAAGTATaGCCTGAGCAGCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRLPPEV*PEQQGE
Trigger: TTCCCCTTGCTGCTCAGGTCATACTTCTGGAGGAAG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTCCCTGCCCTGGGACTaGAGCGGGGGCCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVESLPWD*SGGHPE
Trigger: CTCGGGGTGGCCCCCGCTTCAGTCCCAGGGCAGGGA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCGGGGCCGGCAGCGTTaGGGGCTCATCACCCTCGCT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDRGRQR*GLITLA
Trigger: AGCGAGGGTGATGAGCCCGCAACGCTGCCGGCCCCG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCCTTGCCGACACGCTTaGCCTCCACTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEPCRHA*PPLPAP
Trigger: AGGTGCTGGCAGTGGAGGGCAAGCGTGTCGGCAAGG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGCTTCCATCAACTTGTaGTTCTGTAGCAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKASINL*FCSRSS
Trigger: TGAAGACCTGCTACAGAAGCACAAGTTGATGGAAGC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACCGACACCTCCTTTATaGGGGCCTCGATCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGPTPPL*GPRSAG
Trigger: ACCCGCAGATCGAGGCCCGCATAAAGGAGGTGTCGG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCACCAGGGTCTGAAATaGCTGCCACCTGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPHQGLK*LPPGVQ
Trigger: CTGAACACCAGGTGGCAGGCATTTCAGACCCTGGTG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGAGCGAGGGTGTGGCTaGGGCTCTCCCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNERGCG*GSPTSC
Trigger: GCAGGATGTGGGAGAGCCGCAGCCACACCCTCGCTC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTCCTTTGTGGTGGCCTaGAGCTCGTCCCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEESFVVA*SSSQSR
Trigger: CCGGCTCTGGGACGAGCTGCAGGCCACCACAAAGGA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATCCACCGCACGCTGCTaGCGCAAATGTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSTARC*RKCRFS
Trigger: GCTGAAGCGACATTTGCGGCAGCAGCGTGCGGTGGA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCACATGTTCTCCAGCTTaGGCTTGCGCTCTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPTCSPA*ACALPP
Trigger: TGGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTTGTCCACCCGCTCCTaGCCAATCGCCCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDILSTRS*PIAPVS
Trigger: GGAGACCGGGGCGATTGGGCAGGAGCGGGTGGACAA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGGAGGCGGCCAGCAGCTaGATGCGCGTGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEEAASS*MRVSMS
Trigger: GCTCATTGACACGCGCATGCAGCTGCTGGCCGCCTC...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGGAAGGACTCGGCCGTaGTGGCGTCCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPGRTRP*WRPAPR
Trigger: ACGTGGGGCTGGACGCCAGCACGGCCGAGTCCTTCC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCTTCTCCCCAGCATATaGTGTCTGCAGACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVELLPSI*CLQTGG
Trigger: GCCACCCGTCTGCAGACAGCATATGCTGGGGAGAAG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCATCTGAGGCCTGGTGCTaGCGCTGCAGCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSSEAWC*RCSRDS
Trigger: CGAGTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGA...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGACATGCCTGCAAGTaGACCAAAGGCCTACTTTAT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGHACK*TKGLLY
Trigger: ATAAAGTAGGCCTTTGGTGCACTTGCAGGCATGTCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGAGCTTCCTCTAAACTaGCCTGGGAAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPELPLN*PGKEAW
Trigger: CCAGGCTTCCTTCCCAGGGCAGTTTAGAGGAAGCTC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGGACGTAGCCTGCTCTaGTGGGAGGTGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNGRSLL*WEVAAG
Trigger: CCCTGCAGCCACCTCCCAGCAGAGCAGGCTACGTCC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGACGTGGGAAGCATGTTaGTGCATTTCTACAGCAACA +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVTWEAC*CISTAT
Trigger: TGTTGCTGTAGAAATGCAGCAACATGCTTCCCACGT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTAGAGGGGCTCCGTGGTaGGCCTCTCATCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIRGAPW*ASHPQW
Trigger: CCACTGGGGATGAGAGGCCCACCACGGAGCCCCTCT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCAGCAATCTCACAGATaGCATGTCTCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPQQSHR*HVSGPG
Trigger: CCCTGGCCCTGAGACATGCCATCTGTGAGATTGCTG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCTTTCTTGCCGAGGCTaGCGTCGGGGCCGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPLSCRG*RRGRRG
Trigger: CCCTCTCCGGCCCCGACGCCAGCCTCGGCAAGAAAG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGATCCAGCTCGTCGTCTaGGGCGTCCCAGCGGGCATT +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVIQLVV*GVPAGI
Trigger: AATGCCCGCTGGGACGCCCCAGACGACGAGCTGGAT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCTGCGCATCTTCCCCTTaGTGGGCTTTGGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPCASSP*WALAAS
Trigger: AGATGCTGCCAAAGCCCACCAAGGGGAAGATGCGCA...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGACATTCTCCAGGCAGTaGATGCGCATCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRTFSRQ*MRIFPL
Trigger: CAAGGGGAAGATGCGCATCCACTGCCTGGAGAATGT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGGGATGATGCCCAGCTaGCGCTCAGCCACATTGAAT +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPGMMPS*RSATLN
Trigger: ATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCCTTCTCTTGAAACTTaGGCGGCTTCTCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPPSLET*AASPRC
Trigger: GCACCGTGGAGAAGCCGCCCAAGTTTCAAGAGAAGG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGTGGTCTCGAGCCTCTaGCGCCGGGACTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPVVSSL*RRDCSS
Trigger: GCTGCTGCAGTCCCGGCGCCAGAGGCTCGAGACCAC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGACTTCCAGAGTCGTTTaGACTGCTCCAGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRTSRVV*TAPVGP
Trigger: AGGCCCAACTGGAGCAGTCCAAACGACTCTGGAAGT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTCTTCGGGGAATCCCTaGGCCTGCTGCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVSSGNP*ACCSRC
Trigger: GCACCTGGAGCAGCAGGCCCAGGGATTCCCCGAAGA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCCGATGGGTCACATCTaGGGAATCCCGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRPMGHI*GIPKLF
Trigger: GAAGAGTTTCGGGATTCCCCAGATGTGACCCATCGG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCACCTGGTGTTCAGATaGTCCTGGTACTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRHLVFR*SWYCFT
Trigger: GGTGAAGCAGTACCAGGACCATCTGAACACCAGGTG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCCACACGGGCCTGGATaGCGGCCACGTCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGPHGPG*RPRHAP
Trigger: TGGAGCGTGACGTGGCCGCCATCCAGGCCCGTGTGG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGAGCTGCTCAGCCTCTaGGAGGGATTCGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGELLSL*EGFGHV
Trigger: GACATGCCCGAATCCCTCCCAGAGGCTGAGCAGCTC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAAGCTTCCAGGGAGTCTaGGGGCTCCAAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSFQGV*GLQVSQ
Trigger: CTGGCTCACTTGGAGCCCCCAGACTCCCTGGAAGCT...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGCAGCCGAGAGGTGCTaGGTCTTCTCCTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEAAERC*VFSFVV
Trigger: CACCACAAAGGAGAAGACCCAGCACCTCTCGGCTGC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGCAGGTCGGAGCTCCTaGCAGCCGAGAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEAGRSS*QPRGAG
Trigger: CCCAGCACCTCTCGGCTGCCAGGAGCTCCGACCTGC...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACCCATTGAAGGCACCTaGGCAAACAGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGPIEGT*ANSSPS
Trigger: GCTGGGGGAGCTGTTTGCCCAGGTGCCTTCAATGGG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCATTCTGCAGTGTCTaGTTCTTCTTCATGAACAGT +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSFCSV*FFFMNS
Trigger: ACTGTTCATGAAGAAGAACCAGACACTGCAGAATGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGCGCTCCTCAAGGTCCTaGCAGTCGATCTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTRSSRS*QSISAA
Trigger: GGCGGCGGAGATCGACTGCCAGGACCTTGAGGAGCG...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCGGGTGGCCACGTCCTaGAACTGCTGCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEERVATS*NCCTWT
Trigger: TGTCCAGGTGCAGCAGTTCCAGGACGTGGCCACCCG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTCCTGCTCCTTGTTCTaGATGGCCTCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPSCSLF*MASAFS
Trigger: GGAGAAGGCAGAGGCCATCCAGAACAAGGAGCAGGA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGTCCAAAGTCCCCGCTaGCCAGGTAGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNVQSPR*PGRAPG
Trigger: CCCAGGAGCCCTACCTGGCCAGCGGGGACTTTGGAC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTGTCCAAAGTCCCCGCTaGCCAGGTAGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIVQSPR*PGRAPG
Trigger: CCCAGGAGCCCTACCTGGCCAGCGGGGACTTTGGAC...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGTTGGTCGAATGTCTTaGAGCCTGGGTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPVGRMS*SLGDRR
Trigger: CCTCCTGTCACCCAGGCTCCAAGACATTCGACCAAC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCAGCCCCAGATTGCATaGTCTGTGCCCAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPQPQIA*SVPNRV
Trigger: AACCCTGTTGGGCACAGACCATGCAATCTGGGGCTG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGTTTCACGACCTTCCTaGGTTTGGACCACAATGTCC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRVSRPS*VWTTMS
Trigger: GGACATTGTGGTCCAAACTCAGGAAGGTCGTGAAAC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCGGTGCGGTAGGTGCTaGAGGCCTGCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGRCGRC*RPAAAA
Trigger: AGCAGCAGCTGCAGGCCTTCAGCACCTACCGCACCG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGACCCTTTCCCCTCGGTaGACTTCAGGGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTTLSPR*TSGWLR
Trigger: CCGCAGCCACCCTGAAGTTCACCGAGGGGAAAGGGT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCTGCTCCTTCTCCTTaGTCCAGCTCTCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSAPSP*SSSQPH
Trigger: ATGAGGCTGAGAGCTGGATCAAGGAGAAGGAGCAGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGCTTGCGCTGTAAGATaGGCACACTGGTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPACAVR*AHWSGL
Trigger: AAGACCTGACCAGTGTGCTCATCTTACAGCGCAAGC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGTGCACTCGGAGGGCTaGGTCCACAGCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTVHSEG*VHSLPP
Trigger: CGGCGGGAGGCTGTGGACTCAGCCCTCCGAGTGCAC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCATCCTCTGGATGGCGATaGTACCTGCCAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSSSGWR*YLPGPA
Trigger: GGCGGGACCTGGCAGGTATCATCGCCATCCAGAGGA...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGTGGAAGCCAAGGCACTaGGCGAGGGTGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEWKPRH*ARVWLR
Trigger: CCGCAGCCACACCCTCGCTCAGTGCCTTGGCTTCCA...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACAGTGCCATAGTCGGCTaGCTGGGCCAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNSAIVG*LGQRQP
Trigger: AGGCTGCCTCTGGCCCAGTCAGCCGACTATGGCACT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTTTCAATCTCTGCATTaGTGCCCTGGTGATACTTCA +
Preference number: 4 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKFQSLH*CPGDTS
Trigger: TGAAGTATCACCAGGGCATCAATGCAGAGATTGAAA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTGGTGGCCCCTGAAGTaGGAGTCCCAGTTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVWWPLK*ESQFCG
Trigger: TCCGCAGAACTGGGACTCTCACTTCAGGGGCCACCA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGACCTAACCCTAGTTTaGTACTGGGCCAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRDLTLV*YWARTV
Trigger: CACAGTTCTGGCCCAGTATCAAACTAGGGTTAGGTC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCAAGGTGATAGAAACTTaGCTGCAGGCCCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPKVIET*LQALGT
Trigger: AGTCCCCAGGGCCTGCAGTCAAGTTTCTATCACCTT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAGGCCAAGGCCTGGGCTaGCCGGTCTCTGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRGQGLG*PVSARP
Trigger: GGGACGCGCAGAGACCGGGCAGCCCAGGCCTTGGCC...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTGTAAGGTGGCTGGTTaGCCACATTTTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRCKVAG*PHFQTL
Trigger: CAGAGTTTGAAAATGTGGGCAACCAGCCACCTTACA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGAAGGCCTGCAGCTGCTaGTGGACGCCCGTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEKACSC*WTPVSE
Trigger: CTCGCTGACGGGCGTCCAGCAGCAGCTGCAGGCCTT...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAATCCAGTCGATGCTGTaGAGCATGTCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGIQSML*SMSWKS
Trigger: GCTCTTCCAGGACATGCTGCACAGCATCGACTGGAT...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGAGCTCCTCAAAGCACTaGTCCAAGTGGCTGATGCGG +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVESSSKH*SKWLMR
Trigger: CCGCATCAGCCACTTGGAGCAGTGCTTTGAGGAGCT...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGGCCTTCCGCCCAGCTaGCATGTTGCTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNGLPPS*HVAQLL
Trigger: GAGGAGCTGAGCAACATGGCAGCTGGGCGGAAGGCC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGCCTCGATCTGCGGGTaGCCAAACTGCTTGCGCGCA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSASICG*PNCLRA
Trigger: TGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGAGCCGGTGGGCGTCTTaGAGCCAAGCCTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEESRWAS*SQAFRS
Trigger: TGACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACAGCTCCCGCAGGGCCTaGAGCCGATGGGTCACATCT +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNSSRRA*SRWVTS
Trigger: AGATGTGACCCATCGGCTGCAGGCCCTGCGGGAGCT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCACCAGGGTCTGAAATaGCTGCCACCTGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEHQGLK*LPPGVQ
Trigger: CTGAACACCAGGTGGCAGGCATTTCAGACCCTGGTG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGATGGCGATGATACCTaGCAGGTCCCGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSDGDDT*QVPPQV
Trigger: GACCTGGGGCGGGACCTGGCAGGTATCATCGCCATC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGGCTCTCCCACATCCTaGCCAGGGCATTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSGSPTS*PGHSSQ
Trigger: CTGGCTGGAATGCCCTGGGCAGGATGTGGGAGAGCC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGAGGTCAGCATGGGTCTaGAAGCGCAGGTCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVRSAWV*KRRSEL
Trigger: GAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAAAGTCCCGGCTGATCTaGAGCTTGGCTCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGKSRLI*SLALDD
Trigger: ATCATCCAGAGCCAAGCTGCAGATCAGCCGGGACTT...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTTCTTCATGAACAGTTaGACAGTTTGCAGATTAGTG +
Preference number: 4 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGFFMNS*TVCRLV
Trigger: CACTAATCTGCAAACTGTGCAACTGTTCATGAAGAA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGCCGCCTCCACCAGCTaGTGCCCTCTCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEAASTS*CPLCST
Trigger: TGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGCGGC...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTCCACCGCACGCTGCTaGCGCAAATGTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEESTARC*RKCRFS
Trigger: GCTGAAGCGACATTTGCGGCAGCAGCGTGCGGTGGA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGTCGGGCAGCTCGCGGTaGTTCTCGTCGATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGESGSSR*FSSMRP
Trigger: GGGCCTCATCGACGAGAAGCACCGCGAGCTGCCCGA...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTCGCTCGAAGGCTGTGTaGACCCGGTGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIRSKAV*TRWKDS
Trigger: CGAGTCCTTCCACCGGGTGCACACAGCCTTCGAGCG...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGGAGAGGAGGGCGTGTaGCTCAGAGAACCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGGEEGV*LREPFP
Trigger: AGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCTGACCCGGCGGTGGTaGCTGCTGCAGGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPLTRRW*LLQVLR
Trigger: CCTCAGAACCTGCAGCAGCCACCACCGCCGGGTCAG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAATCCAGCTCGTCGTCTaGGGCGTCCCAGCGGGCATT +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSIQLVV*GVPAGI
Trigger: AATGCCCGCTGGGACGCCCCAGACGACGAGCTGGAT...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGCATCTTCCCCTTGGTaGGCTTTGGCAGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEASSPW*ALAASL
Trigger: GAGAGATGCTGCCAAAGCCCACCAAGGGGAAGATGC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCTCAGTCTCAATGGCATaGTCAATAACCTTGCCGACA +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSVSMA*SITLPT
Trigger: TGTCGGCAAGGTTATTGACCATGCCATTGAGACTGA...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATACCCAAAGTTATCCTaGGCCACGAGGCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGYPKLS*ATRRWF
Trigger: AAACCAGCGCCTCGTGGCCCAGGATAACTTTGGGTA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCTGCAGTGCCAGGGTaGTCTCGAGCCTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSAVPG*SRASGA
Trigger: GGCGCCAGAGGCTCGAGACCACCCTGGCACTGCAGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTTGGACTGCTCCAGTTaGGCCTTCCGCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDILDCSS*AFRPAA
Trigger: GGCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGGCCAGGTCCTTCAGCTaGTCCCACTGTGCCGACACC +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTARSFS*SHCADT
Trigger: GGTGTCGGCACAGTGGGACCAGCTGAAGGACCTGGC...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGAAATGCCTGCCACCTaGTGTTCAGATGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGEMPAT*CSDGPG
Trigger: ACCAGGACCATCTGAACACCAGGTGGCAGGCATTTC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGCCCCAGGTCTTTTGTaGACTCCACTACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRAPGLL*TPLPLS
Trigger: AGACAAAGGTAGTGGAGTCCACAAAAGACCTGGGGC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACGCATCCACACGGGCCTaGATGGCGGCCACGTCACGC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDASTRA*MAATSR
Trigger: GCGTGACGTGGCCGCCATCCAGGCCCGTGTGGATGC...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGAGCTTCCAGGGAGTCTaGGGGCTCCAAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEESFQGV*GLQVSQ
Trigger: CTGGCTCACTTGGAGCCCCCAGACTCCCTGGAAGCT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCAGAGAGTGAGCTCCTaGCAGTTCTGGAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPQRVSS*QFWRKF
Trigger: GAACTTCCTCCAGAACTGCCAGGAGCTCACTCTCTG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCCCATTGAAGGCACCTaGGCAAACAGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVPIEGT*ANSSPS
Trigger: GCTGGGGGAGCTGTTTGCCCAGGTGCCTTCAATGGG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGTCAACCCGCGGCGTATaGCCCAGAATCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVESTRGV*PRISFC
Trigger: GCAGAATGAGATTCTGGGCCATACGCCGCGGGTTGA...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGCTTCAGCATCACAATaGCGCCCTCTTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGASASQ*RPLHPW
Trigger: CCAAGGATGAAGAGGGCGCCATTGTGATGCTGAAGC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGCTTCAGCATCACAATaGCGCCCTCTTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPASASQ*RPLHPW
Trigger: CCAAGGATGAAGAGGGCGCCATTGTGATGCTGAAGC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGCTGTGTGCACCCGGTaGAAGGACTCGGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEAVCTR*KDSAVL
Trigger: CAGCACGGCCGAGTCCTTCCACCGGGTGCACACAGC...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGCTGTGTGCACCCGGTaGAAGGACTCGGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPAVCTR*KDSAVL
Trigger: CAGCACGGCCGAGTCCTTCCACCGGGTGCACACAGC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTCGGGTGGCCACGTCCTaGAACTGCTGCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIRVATS*NCCTWT
Trigger: TGTCCAGGTGCAGCAGTTCCAGGACGTGGCCACCCG...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCTGCCCAGCTGGCCGTaGACTTCTCAAAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVELPSWP*TSQKPH
Trigger: ATGAGGCTTTTGAGAAGTCCACGGCCAGCTGGGCAG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTCGGTGGCCGCATGGTaGGAAACTGGAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISVAAW*ETGASP
Trigger: AGGGGAGGCTCCAGTTTCCCACCATGCGGCCACCGA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACTCTCGGTGGCCGCATaGTGGGAAACTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSLSVAA*WETGAS
Trigger: GGAGGCTCCAGTTTCCCACCATGCGGCCACCGAGAG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGGGGACGTTCTCTCGGTaGCCGCATGGTGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEGTFSR*PHGGKL
Trigger: CAGTTTCCCACCATGCGGCCACCGAGAGAACGTCCC...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGTATCCATCTTATATCTaGGGGCCCACACTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRYPSYI*GPTLSR
Trigger: ACGGGACAGTGTGGGCCCCCAGATATAAGATGGATA...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTTCGGAGTAGAGTGGTaGGGAAAATATGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRFGVEW*GKYGMS
Trigger: GCTCATTCCATATTTTCCCCACCACTCTACTCCGAA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCTTTCATGGTTTCCTTaGGGGAAAATGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRLSWFP*GKMPAA
Trigger: GGCAGCAGGCATTTTCCCCCAAGGAAACCATGAAAG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTACCAGGGCGGGAACCTaGGGATGTCAGGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDITRAGT*GCQAPS
Trigger: CGATGGAGCCTGACATCCCCAGGTTCCCGCCCTGGT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCGTCCCAGCGGGCATTaGTCCTGCTGTAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNRPSGH*SCCKVA
Trigger: AGCCACCTTACAGCAGGATCAATGCCCGCTGGGACG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTCGTCCCAGCGGGCATTaGTCCTGCTGTAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIRPSGH*SCCKVA
Trigger: AGCCACCTTACAGCAGGATCAATGCCCGCTGGGACG...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGAGTTCACCCATTTCGTaGAGGTCTTTTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLSSPIS*RSFSEQ
Trigger: TTGTTCAGAAAAAGACCTTCACGAAATGGGTGAACT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCTGCTCGATCCAGGTaGGCAGGTCCGAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSARSR*AGPRLA
Trigger: GGCTAGCCTCGGACCTGCTCACCTGGATCGAGCAGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCACAAGAGGTGAGCCTTaGTCTCATCCATCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPTRGEP*SHPSSR
Trigger: TCGACTGGATGGATGAGATCAAGGCTCACCTCTTGT...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCATCAGGGTGGCTGCGGTaGTGGCCTTCACTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSSGWLR*WPSLCP
Trigger: GGGACAAAGTGAAGGCCATCACCGCAGCCACCCTGA...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTCTGGGGGCTCCAAGTaGGCCAGAGTGTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEESGGSK*ARVYSW
Trigger: CCAGGAATACACTCTGGCTCACTTGGAGCCCCCAGA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGGTGCTTCTCGTCGATaGGGCCCAGGATCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPGASRR*GPGSRH
Trigger: GTGCCGAGATCCTGGGCCTCATCGACGAGAAGCACC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGCGGTGCTCACGCCCTaGAGCCAGGACAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDAVLTP*SQDSIS
Trigger: GGAGATGCTGTCCTGGCTGCAGGGCGTGAGCACCGC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTCTCCTTGTCTTTCTTaGCGAGGCTGGCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISPCLS*RGWRRG
Trigger: GCCCCGACGCCAGCCTCGGCAAGAAAGACAAGGAGA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGATCAGGTCGGGCCGGTaGTTGTGTATCAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEIRSGR*LCIRAL
Trigger: TAATGCCCTGATACACAAGCACCGGCCCGACCTGAT...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGCGTGCTCCAGGTTGTaGCGGGCATTGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSACSRL*RALESF
Trigger: GAAGGACTCCAATGCCCGGCACAACCTGGAGCACGC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAAGGACAGTGATGGTCTaGTCGATCCAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGRTVMV*SIQVSR
Trigger: CCTGCTCACCTGGATCGAGCAGACCATCACTGTCCT...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACAAGCGCCGGGCCAGTTaGTCTAGCTTCTCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNKRRAS*SSFSCR
Trigger: TCGGCAGGAGAAGCTAGAGCAACTGGCCCGGCGCTT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCCAGGTCTCTCTCATTaGGGCCTTCCGGTCAAAGCG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEPGLSH*GLPVKA
Trigger: CGCTTTGACCGGAAGGCCGCAATGAGAGAGACCTGG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGGTCTCGATGGCCTCATaGTTCTTCTTGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEVSMAS*FFLAAS
Trigger: GGAGGCCGCCAAGAAGAAGCATGAGGCCATCGAGAC...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCATGCGGGTGCCCAAACTaGTTGCGCGCAACCATGCCA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSCGCPN*LRATMP
Trigger: TGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCA...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTATGCGGGCCTCGATCTaGGGGTGCCCAAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIMRASI*GCPNCL
Trigger: CAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCAT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTCCGACACCTCCTTTATaGGGGCCTCGATCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIPTPPL*GPRSAG
Trigger: ACCCGCAGATCGAGGCCCGCATAAAGGAGGTGTCGG...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCAGCTGGTCCCACTGTaGCGACACCTCCTTTATGCG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEQLVPL*RHLLYA
Trigger: CGCATAAAGGAGGTGTCGGCACAGTGGGACCAGCTG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGGCCCCTTCGTCCTaGCCCACATCTTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSVAPSS*PTSSPE
Trigger: CTCTGGTGAAGATGTGGGGCAGGACGAAGGGGCCAC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACAATCCCTGGGCCTGCTaGTCCAGGTGCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNNPWAC*SRCSIT
Trigger: GGTGATGGAGCACCTGGAGCAGCAGGCCCAGGGATT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGAGGATGTCGAACCTGTaGTGCACGACCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEERMSNL*CTTSRS
Trigger: GGACCTGGAGGTCGTGCAGCACAGGTTCGACATCCT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGACTGCTTCACCTCCCTaGTGCGTGGGTGGCCACTCT +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTTASPP*CVGGHS
Trigger: AGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTACTGCTTCACCTCCCTaGTGCGTGGGTGGCCACTCT +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDITASPP*CVGGHS
Trigger: AGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATTGATACCTGCATGCTaGTGCAGGAGCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGLIPAC*CRSCSA
Trigger: GGCTGAGCAGCTCCTGCAGCAGCATGCAGGTATCAA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGTCCTTGATACCTGCATaGTGCTGCAGGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVESLIPA*CCRSCS
Trigger: TGAGCAGCTCCTGCAGCAGCATGCAGGTATCAAGGA...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCAGGATGGCTTCAGCCTaGTTGGCATCTTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPRMASA*LASFWN
Trigger: GTTCCAGAAAGATGCCAAGCAGGCTGAAGCCATCCT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTCGTTGTTCTTCCTGTaGCTGTCCTCAATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPSLFFL*LSSISC
Trigger: GCAGCTGATTGAGGACAGGCACAGGAAGAACAACGA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTCGTCCCAGAGCCGGTaGAGGGCTTCCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISSQSR*RASSFW
Trigger: CCAAAAGCTGGAAGCCCTGCACCGGCTCTGGGACGA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCCTTTGTGGTGGCCTaGAGCTCGTCCCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSFVVA*SSSQSR
Trigger: CCGGCTCTGGGACGAGCTGCAGGCCACCACAAAGGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCTGGCAGCCGAGAGGTaGTGGGTCTTCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEELAAER*WVFSFV
Trigger: CACAAAGGAGAAGACCCAGCACCTCTCGGCTGCCAG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACAGGTCAGCATGGGTCTaGAAGCGCAGGTCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNRSAWV*KRRSEL
Trigger: GAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTCCTCCACCGCACGCTaGTGCCGCAAATGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISSTAR*CRKCRF
Trigger: GAAGCGACATTTGCGGCAGCAGCGTGCGGTGGAGGA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTACGTCCTGGAACTGCTaGACCTGGACACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDITSWNC*TWTPSR
Trigger: CCTGCTGGGTGTCCAGGTGCAGCAGTTCCAGGACGT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTGCGGCAGACACCTCCTaGTCCTTGTTCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIAADTS*SLFWMA
Trigger: GGCCATCCAGAACAAGGAGCAGGAGGTGTCTGCCGC...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCCGGGTTTCAATCTCTaGATTGATGCCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRPGFNL*IDALVI
Trigger: TATCACCAGGGCATCAATGCAGAGATTGAAACCCGG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGCCTGGTGCTGCCGCTaGAGCAGGGACTCGCCAAGC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTAWCCR*SRDSPS
Trigger: GCTTGGCGAGTCCCTGCTGCAGCGGCAGCACCAGGC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGAGGCCCAGTCTCCTCTaGGGGTCTCTCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVRPSLL*GSLCNL
Trigger: CAGATTGCAGAGAGACCCGCAGAGGAGACTGGGCCT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGAACTGGAGCCTCCCCTaGTGTCTCGCCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTNWSLP*CLAFLL
Trigger: GAGGAGGAAGGCGAGACAGCAGGGGAGGCTCCAGTT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGGCGAAGGCAGCTTTTaGAGTGCAGCGTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDGEGSF*SAAWGP
Trigger: CGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCCTGGGGACGTTGGTTaGAGAGCTTCTGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVPGDVG*RASGAQ
Trigger: CTGAGCACCAGAAGCTCTGCAACCAACGTCCCCAGG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACTGGCCTGTTTCCTCTaGGCTGTGGGGAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSLACFL*AVGRSG
Trigger: TCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGCATCTTCCCCTTGGTaGGCTTTGGCAGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGASSPW*ALAASL
Trigger: GAGAGATGCTGCCAAAGCCCACCAAGGGGAAGATGC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCGCCCGTCAGCGAGTTaGCAAACTTGCGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEERPSAS*QTCGCS
Trigger: TGAACAGCCGCAAGTTTGCCAACTCGCTGACGGGCG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGTGGTCTCGAGCCTCTaGCGCCGGGACTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEVVSSL*RRDCSS
Trigger: GCTGCTGCAGTCCCGGCGCCAGAGGCTCGAGACCAC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTGGGGGTCACAAGGCTaGTACCCTTTCCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTWGSQG*YPFPSV
Trigger: CACCGAGGGGAAAGGGTACCAGCCTTGTGACCCCCA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTGGGGGTCACAAGGCTaGTACCCTTTCCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIWGSQG*YPFPSV
Trigger: CACCGAGGGGAAAGGGTACCAGCCTTGTGACCCCCA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGTTGGACTGCTCCAGTTaGGCCTTCCGCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGELDCSS*AFRPAA
Trigger: GGCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAA...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCCGATGGGTCACATCTaGGGAATCCCGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEPMGHI*GIPKLF
Trigger: GAAGAGTTTCGGGATTCCCCAGATGTGACCCATCGG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGAGCTGCTCAGCCTCTaGGAGGGATTCGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNELLSL*EGFGHV
Trigger: GACATGCCCGAATCCCTCCCAGAGGCTGAGCAGCTC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGCAGGTCGGAGCTCCTaGCAGCCGAGAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEAGRSS*QPRGAG
Trigger: CCCAGCACCTCTCGGCTGCCAGGAGCTCCGACCTGC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTCGTCTGACCGCAGCTaGTCCTCCATGGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTSSDRS*SSMALI
Trigger: GATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCCCATTGAAGGCACCTaGGCAAACAGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNPIEGT*ANSSPS
Trigger: GCTGGGGGAGCTGTTTGCCCAGGTGCCTTCAATGGG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACTGTTCCCCCTCAGGGTaGCCTGCAGACAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDCSPSG*PADSRP
Trigger: GGGCCTGCTGTCTGCAGGCCACCCTGAGGGGGAACA...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTGTTCCCCCTCAGGGTaGCCTGCAGACAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDCSPSG*PADSRP
Trigger: GGGCCTGCTGTCTGCAGGCCACCCTGAGGGGGAACA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGTCTCCCGCTTGAGCTaGAACAGGTGGTACATGTTC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEVSRLS*NRWYMF
Trigger: GAACATGTACCACCTGTTCCAGCTCAAGCGGGAGAC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCCTTCCACTCGGCGATaGTGGCCGCCTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTPSTRR*WPPRCG
Trigger: GCCACAGCGAGGCGGCCACCATCGCCGAGTGGAAGG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGCGCATGGTGGGAAACTaGAGCCTCCCCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTRMVGN*SLPCCL
Trigger: GAGACAGCAGGGGAGGCTCCAGTTTCCCACCATGCG...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAAGGCGCCAGAGGAGCTaGGAGCCCCTGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTRRQRS*EPLSLE
Trigger: CTCCAGGGACAGGGGCTCCCAGCTCCTCTGGCGCCT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGGAGTAGCTGTCACATaGGTGGTGATACCAAGACAT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRGVAVT*VVIPRH
Trigger: ATGTCTTGGTATCACCACCCATGTGACAGCTACTCC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCAGGGGGCCTCATTCTaGATGCCTGCCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPQGASF*MPAPVA
Trigger: AGCCACAGGGGCAGGCATCCAGAATGAGGCCCCCTG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGTGTGGAGTTGCTTGCTaGAAATGCCTCACTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRCGVAC*KCLTSG
Trigger: ACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCACA...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCATTTTCAGTCTAGTTaGTCGAATGTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGHFQSS*SNVLEP
Trigger: AGGCTCCAAGACATTCGACCAACTAGACTGAAAATG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTGTGTCAACCTCGTTTaGGAATACTGTCAAAAGACT +
Preference number: 4 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVCVNLV*EYCQKT
Trigger: AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGGCCATGTGGTCCCGCTaGCTTCATCCTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVAMWSR*LHPPLD
Trigger: ATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGC...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGTTTCCTCTGCGCTGTaGGGAGGAGTGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNVSSAL*GGVEEA
Trigger: AGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGCCTTGTAGAGATCGGTaGTGCGGCAGGACACTCGAG +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTPCRDR*CGRTLE
Trigger: CTCGAGTGTCCTGCCGCATCACCGATCTCTACAAGG...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCAACGCATCCTTGGCTaGGCGTGTTTCACGACCTTC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEQRILG*ACFTTF
Trigger: GAAGGTCGTGAAACACGCTCAGCCAAGGATGCGTTG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGGGCTGTTCAGGACAGTaGTGGTCTGCTCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTGCSGQ*WSARSR
Trigger: CCTGGATCGAGCAGACCATCACTGTCCTGAACAGCC...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCAGGGTGGCTGCGGTaGTGGCCTTCACTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSGWLR*WPSLCP
Trigger: GGGACAAAGTGAAGGCCATCACCGCAGCCACCCTGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTGGAAGCCAAGGCACTaGGCGAGGGTGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTWKPRH*ARVWLR
Trigger: CCGCAGCCACACCCTCGCTCAGTGCCTTGGCTTCCA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCTTGCCCGGGTCGTCTaGCCGCAGCTGGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSLARVV*PQLVLH
Trigger: ATGGAGGACCAGCTGCGGTCAGACGACCCGGGCAAG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACAGTGCCATAGTCGGCTaGCTGGGCCAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDSAIVG*LGQRQP
Trigger: AGGCTGCCTCTGGCCCAGTCAGCCGACTATGGCACT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGCGTCGGTCTCCCGCTTaGGCTGGAACAGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGERRSPA*AGTGGT
Trigger: TGTACCACCTGTTCCAGCTCAAGCGGGAGACCGACG...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGCATTGATGCCCTGGTaGTACTTCATGAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEALMPW*YFMSSS
Trigger: GGAACTGCTCATGAAGTATCACCAGGGCATCAATGC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTCGCCTTCCTCCTCTTaGGGCCCAGTCTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDSPSSS*GPVSSA
Trigger: CGCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTGGTGGCCCCTGAAGTaGGAGTCCCAGTTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGWWPLK*ESQFCG
Trigger: TCCGCAGAACTGGGACTCTCACTTCAGGGGCCACCA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGAGGACGTGGAGAAGCTaGTCAAGGGGTACCACACCT +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVRTWRS*SRGTTP
Trigger: AGGTGTGGTACCCCTTGATCAGCTTCTCCACGTCCT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGAGGGTGGTAGATATTTaGCCTCTGTACTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRRVVDI*PLYSCD
Trigger: GTCACATGAGTACAGAGGTCAAATATCTACCACCCT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACAGTTGGTGTCACCCTaGCATATAGTGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGQLVSP*HIVSGP
Trigger: TGGCCCTGACACTATATGTCAGGGTGACACCAACTG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTACTTTATTGCTAGGTaGGTGCAGTCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPYFIAR*VQSPHC
Trigger: GCAGTGAGGTGACTGCACTCACCTAGCAATAAAGTA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTATGCGGAGGAGAGGCTaGGCCTTCCACGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSMRRRG*AFHGPP
Trigger: AGGAGGCCCGTGGAAGGCTCAGCCTCTCCTCCGCAT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAATGCGGAGGAGAGGCTaGGCCTTCCACGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTMRRRG*AFHGPP
Trigger: AGGAGGCCCGTGGAAGGCTCAGCCTCTCCTCCGCAT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGGGCTCTGGCTGCAGTaGCTCCCAGGAACTAGACAA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSGLWLQ*LPGTRQ
Trigger: TTGTCTAGTTCCTGGGAGTCACTGCAGCCAGAGCCC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGCCACATTGAATGCGTaGTCCAGGTTGTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSATLNA*SRLCRA
Trigger: TGCCCGGCACAACCTGGAGCACGCATTCAATGTGGC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCCTTGCCGACACGCTTaGCCTCCACTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDPCRHA*PPLPAP
Trigger: AGGTGCTGGCAGTGGAGGGCAAGCGTGTCGGCAAGG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTGCTCTAGCTTCTCCTaGCGAATGAGCTCATTTCTC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPCSSFS*RMSSFL
Trigger: GAGAAATGAGCTCATTCGGCAGGAGAAGCTAGAGCA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGGTGCCCAAACTGCTTaGGCGCAACCATGCCATGAG +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNGAQTA*AQPCHE
Trigger: CTCATGGCATGGTTGCGCGCAAGCAGTTTGGGCACC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGCCTCGATCTGCGGGTaGCCAAACTGCTTGCGCGCA +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDASICG*PNCLRA
Trigger: TGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGATGGCGATGATACCTaGCAGGTCCCGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDDGDDT*QVPPQV
Trigger: GACCTGGGGCGGGACCTGGCAGGTATCATCGCCATC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTGCGAGTCCATCAGCTaGTGGGACTCACGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGCESIS*WDSRSR
Trigger: CCTGGAGCGTGAGTCCCAGCAGCTGATGGACTCGCA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGATGGGAAGCCAGCTCTaGCACAAACGCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEMGSQL*HKRLVL
Trigger: AAGCACCAGGCGTTTGTGGCAGAGCTGGCTTCCCAT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGTCGTCCCAGAGCCGGTaGAGGGCTTCCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGESSQSR*RASSFW
Trigger: CCAAAAGCTGGAAGCCCTGCACCGGCTCTGGGACGA...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTTCTTCATGAACAGTTaGACAGTTTGCAGATTAGTG +
Preference number: 4 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLFFMNS*TVCRLV
Trigger: CACTAATCTGCAAACTGTGCAACTGTTCATGAAGAA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGCCTCCACCAGCTGCTaGCCTCTCTGCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDASTSC*PLCSTS
Trigger: GGATGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGCCGCCTCCACCAGCTaGTGCCCTCTCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTAASTS*CPLCST
Trigger: TGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGCGGC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGCCGCCTCCACCAGCTaGTGCCCTCTCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTAASTS*CPLCST
Trigger: TGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGCGGC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGTCCCAGGAGCTCTaGAGGTGCCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRLSQEL*RCPRRS
Trigger: GGAGCGCCTGGGGCACCTGCAGAGCTCCTGGGACAG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACAGGTAGTACTGCTGTaGCTCGTTGGCGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSQVVLL*LVGVPQ
Trigger: CTGAGGGACGCCAACGAGGCACAGCAGTACTACCTG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGGCCTCAGCCTCGTCTaGATCCAGGTAGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSGLSLV*IQVVLL
Trigger: CAGCAGTACTACCTGGATGCAGACGAGGCTGAGGCC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCACGTCCTTCAGCCCTaGGTAGTGCTTGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVHVLQP*VVLVHL
Trigger: CAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCTCCAGGAGGTCTaGCCACATCTCGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEELQEV*PHLVQP
Trigger: GGGCTGAACGAGATGTGGGCAGACCTCCTGGAGCTC...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGCCACGTCCTGGAACTaGTGCACCTGGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDATSWN*CTWTPS
Trigger: GCTGGGTGTCCAGGTGCAGCAGTTCCAGGACGTGGC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTCCTGGGTCTCGATCTaGCGGATGATGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEESWVSI*RMMLSI
Trigger: GATGGAGAGCATCATCCGGCAGATCGAGACCCAGGA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGAACTGGAGCCTCCCCTaGTGTCTCGCCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGNWSLP*CLAFLL
Trigger: GAGGAGGAAGGCGAGACAGCAGGGGAGGCTCCAGTT...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTGGGCCTCATTCTGGATaGCTGCCCCTGTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIGPHSG*LPLWLL
Trigger: TAGAAGCCACAGGGGCAGGCATCCAGAATGAGGCCC...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGGGTGGAACTGATTTCTaGCGGCACTGGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVGGTDF*RHWSAL
Trigger: GAGTGCTGACCAGTGCCGGCAGAAATCAGTTCCACC...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATCGGGTCTGTGGAGTTaGTTGCTGGAAATGCCTCAC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSGLWS*LLEMPH
Trigger: GTGAGGCATTTCCAGCAAGCAACTCCACAGACCCGA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTAGAGGGGCTCCGTGGTaGGCCTCTCATCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSRGAPW*ASHPQW
Trigger: CCACTGGGGATGAGAGGCCCACCACGGAGCCCCTCT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTCCTCATCCTTGCCATaGAAGAGCCACTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVSSSLP*KSHSLP
Trigger: TGGCAGCGAGTGGCTCTTCCATGGCAAGGATGAGGA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATATCCAGCTCGTCGTCTaGGGCGTCCCAGCGGGCATT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDIQLVV*GVPAGI
Trigger: AATGCCCGCTGGGACGCCCCAGACGACGAGCTGGAT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGCGCATCTTCCCCTTaGTGGGCTTTGGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEECASSP*WALAAS
Trigger: AGATGCTGCCAAAGCCCACCAAGGGGAAGATGCGCA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACCCAGGACCAGGCGGTaGTTGCCATCTACAATGTCG +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSPRTRR*LPSTMS
Trigger: CGACATTGTAGATGGCAACCACCGCCTGGTCCTGGG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCCGTGTCGGTCTCGATaGCCTCATGCTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEPCRSR*PHASSW
Trigger: CCAAGAAGAAGCATGAGGCCATCGAGACCGACACGG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTGGGGGTCACAAGGCTaGTACCCTTTCCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPWGSQG*YPFPSV
Trigger: CACCGAGGGGAAAGGGTACCAGCCTTGTGACCCCCA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGAAGCACTGCTCCAAGTaGCTGATGCGGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEKHCSK*LMRSWM
Trigger: CATCCAGGACCGCATCAGCCACTTGGAGCAGTGCTT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGATGGAGAGCCAGGCCTaGAAGTCATCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVMESQA*KSSRSC
Trigger: GCAGGATCTGGATGACTTCCAGGCCTGGCTCTCCAT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGGGTCCGTCTGGCCTTaGATCACTTTCTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNGSVWP*ITFSPD
Trigger: GTCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGCAGGTCGGAGCTCCTaGCAGCCGAGAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHAGRSS*QPRGAG
Trigger: CCCAGCACCTCTCGGCTGCCAGGAGCTCCGACCTGC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTTGTTGAGGTCAGCATaGGTCTGCAAGCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVLLRSA*VCKRRS
Trigger: CGACCTGCGCTTGCAGACCCATGCTGACCTCAACAA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCGCTCCTCAAGGTCCTaGCAGTCGATCTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVERSSRS*QSISAA
Trigger: GGCGGCGGAGATCGACTGCCAGGACCTTGAGGAGCG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTGGAACTGCTGCACCTaGACACCCAGCAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGWNCCT*TPSRWS
Trigger: GCTCCACCTGCTGGGTGTCCAGGTGCAGCAGTTCCA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCAGAGGAGACATCCCTaGGCCTCTCCTGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGQRRHP*ASPGSR
Trigger: TCGAGACCCAGGAGAGGCCCAGGGATGTCTCCTCTG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGGCATCCCTCGAGAACTaGCACACCTCCAGCAACATG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEASLEN*HTSSNM
Trigger: CATGTTGCTGGAGGTGTGCCAGTTCTCGAGGGATGC...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCCTTGCTGCCCTTCCTaGGACCGCCTGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEPCCPS*DRLWWH
Trigger: GTGCCACCACAGGCGGTCCCAGGAAGGGCAGCAAGG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGCTGCCACTGGGAGTaGGGCGAGGGTCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGCHWE*GEGPSI
Trigger: AATGCTGGGACCCTCGCCCCACTCCCAGTGGCAGCC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGTTTGGCTGCCACTaGGAGTGGGGCGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTWFGCH*EWGEGP
Trigger: GGGACCCTCGCCCCACTCCCAGTGGCAGCCAAACCA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATGCAGCTGGCTGCCCTaGACCAGGCCAGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRCSWLP*TRPGDL
Trigger: CAGGTCCCCTGGCCTGGTCCAGGGCAGCCAGCTGCA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTGTGTCAACCTCGTTTaGGAATACTGTCAAAAGACT +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRCVNLV*EYCQKT
Trigger: AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCAGCCCCAGATTGCATaGTCTGTGCCCAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVQPQIA*SVPNRV
Trigger: AACCCTGTTGGGCACAGACCATGCAATCTGGGGCTG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCTGCCTCAGTCTTCATaGAAGGATCCCTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNLPQSS*KDPCPG
Trigger: CCCAGGGCAGGGATCCTTCCATGAAGACTGAGGCAG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGTCATGTCACTGGGCTaGCCTGTTTCCTCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNVMSLG*PVSSAL
Trigger: CAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGAC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCGTCCCAGCGGGCATTaGTCCTGCTGTAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDRPSGH*SCCKVA
Trigger: AGCCACCTTACAGCAGGATCAATGCCCGCTGGGACG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGCTTCTCCTGCCGAATaGGCTCATTTCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSASPAE*AHFSGP
Trigger: TGGCCCTGAGAAATGAGCTCATTCGGCAGGAGAAGC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACTCAGGGTGGCTGCGGTaGTGGCCTTCACTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDSGWLR*WPSLCP
Trigger: GGGACAAAGTGAAGGCCATCACCGCAGCCACCCTGA...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGACCCTTTCCCCTCGGTaGACTTCAGGGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVETLSPR*TSGWLR
Trigger: CCGCAGCCACCCTGAAGTTCACCGAGGGGAAAGGGT...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTCTGCTCCTTCTCCTTaGTCCAGCTCTCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVSAPSP*SSSQPH
Trigger: ATGAGGCTGAGAGCTGGATCAAGGAGAAGGAGCAGA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCGCGCAACCATGCCATaGGCCTCCTGGAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDRATMP*ASWKIC
Trigger: GCAGATCTTCCAGGAGGCTCATGGCATGGTTGCGCG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTCCGACACCAGGGTCTaGAATGCCTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDSDTRV*NACHLV
Trigger: CACCAGGTGGCAGGCATTTCAGACCCTGGTGTCGGA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGTCCCTCCTCTCCCATTaGAGGCACCTGGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGESLLSH*RHLGKQ
Trigger: CTGTTTGCCCAGGTGCCTTCAATGGGAGAGGAGGGA...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGGATCTCATCGGAGATaGCGTAGAGCTCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGGSHRR*RRAPAR
Trigger: GCGAGCAGGAGCTCTACGTCATCTCCGATGAGATCC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCATCTCGATCTGCCGGATaGTGCTCTCCATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSSRSAG*CSPSRR
Trigger: TCTCCTGGATGGAGAGCATCATCCGGCAGATCGAGA...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGGATGTGGTGGCCCCTaGAGTGAGAGTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPGCGGP*SESPSS
Trigger: AGAACTGGGACTCTCACTTCAGGGGCCACCACATCC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTCCAGGTGTACACGCTaGTCCTTGAGGAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEESRCTR*SLRNWR
Trigger: TCTCCAGTTCCTCAAGGAGCAGCGTGTACACCTGGA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCCAGGTCTCTCTCATTaGGGCCTTCCGGTCAAAGCG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPPGLSH*GLPVKA
Trigger: CGCTTTGACCGGAAGGCCGCAATGAGAGAGACCTGG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGCAGAGTCGTTTGGACTaGTCCAGTTGGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEQSRLD*SSWAFR
Trigger: GCGGAAGGCCCAACTGGAGCAGTCCAAACGACTCTG...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATATGCGGGCCTCGATCTaGGGGTGCCCAAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDMRASI*GCPNCL
Trigger: CAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCAT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGAGCTCCCGCAGGGCCTaGAGCCGATGGGTCACATCT +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNESSRRA*SRWVTS
Trigger: AGATGTGACCCATCGGCTGCAGGCCCTGCGGGAGCT...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACACTGCTTCACCTCCCTaGTGCGTGGGTGGCCACTCT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDTASPP*CVGGHS
Trigger: AGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTTGATACCTGCATGCTaGTGCAGGAGCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNLIPAC*CRSCSA
Trigger: GGCTGAGCAGCTCCTGCAGCAGCATGCAGGTATCAA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCCGGATCCCAGCCTCTaGAGCTTCCAGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSPDPSL*SFQGVW
Trigger: CCAGACTCCCTGGAAGCTGCAGAGGCTGGGATCCGG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACCGGATCCCAGCCTCTaGAGCTTCCAGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTPDPSL*SFQGVW
Trigger: CCAGACTCCCTGGAAGCTGCAGAGGCTGGGATCCGG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATCGTTGTTCTTCCTGTaGCTGTCCTCAATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSLFFL*LSSISC
Trigger: GCAGCTGATTGAGGACAGGCACAGGAAGAACAACGA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGGGAACCGCTTCTCGATaGTCAAGTCTGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVGTASR*SSLHLL
Trigger: GAGGAGATGCAGACTTGAGCATCGAGAAGCGGTTCC...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTTCTTCATGAACAGTTaGACAGTTTGCAGATTAGTG +
Preference number: 4 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRFFMNS*TVCRLV
Trigger: CACTAATCTGCAAACTGTGCAACTGTTCATGAAGAA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR GCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCCCAGAATCTCATTCTaGAGTGTCTGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPPRISF*SVWFFF
Trigger: GAAGAAGAACCAGACACTGCAGAATGAGATTCTGGG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATAGCTGCTGCCCTCTCTaGAGCACATCCTCAACCCGC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDSCCPL*STSSTR
Trigger: GCGGGTTGAGGATGTGCTGCAGAGAGGGCAGCAGCT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGCACGTCCTTCAGCCCTaGGTAGTGCTTGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTHVLQP*VVLVHL
Trigger: CAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTG...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACATGTTCTCCAGCTTaGGCTTGCGCTCTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNTCSPA*ACALPP
Trigger: TGGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGAGGCGGCCAGCAGCTaGATGCGCGTGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSEAASS*MRVSMS
Trigger: GCTCATTGACACGCGCATGCAGCTGCTGGCCGCCTC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGGTTCTGGATGGCCTCTaGCTTCTCCCCAGCATATGC +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTVLDGL*LLPSIC
Trigger: GCATATGCTGGGGAGAAGGCAGAGGCCATCCAGAAC...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTCCTGGGTCTCGATCTaGCGGATGATGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISWVSI*RMMLSI
Trigger: GATGGAGAGCATCATCCGGCAGATCGAGACCCAGGA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATAACTGGAGCCTCCCCTaGTGTCTCGCCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDNWSLP*CLAFLL
Trigger: GAGGAGGAAGGCGAGACAGCAGGGGAGGCTCCAGTT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACACTCAGCCAGGCCCTaGCAACCGTGGGAGGGTACC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRHSARP*QPWEGT
Trigger: GGTACCCTCCCACGGTTGGCAGGGCCTGGCTGAGTG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCAGATCAGAGCCCTGTaGCCTAGCCACGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVQIRAL*PSHGFQ
Trigger: TTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTATTGCTGGTTTGGCTaGCACTGGGAGTGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPYCWFG*HWEWGE
Trigger: CTCGCCCCACTCCCAGTGGCAGCCAAACCAGCAATA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTTGCAGAGCTTCTGGTaGTCAGGGCTGGAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPLQSFW*SGLEGG
Trigger: ACCACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTTGGGGGAAAATGCCTaGTGCCCTCCGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHLGENA*CPPPSP
Trigger: GGGGGAGGGCGGAGGGCAGCAGGCATTTTCCCCCAA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTTCCTTGGGGGAAAATaGCTGCTGCCCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDFLGGK*LLPSAL
Trigger: GAGGGCGGAGGGCAGCAGGCATTTTCCCCCAAGGAA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGTGGCTCCTGCCTGCTaGAGTTGGTGTCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDVAPAC*SWCHPD
Trigger: GTCAGGGTGACACCAACTGCAGCAGGCAGGAGCCAC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTGTTCCAGGACCTGTTaGAAGCCTTCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVCSRTC*KPSCWA
Trigger: GGCCCAACAAGAAGGCTTCCAACAGGTCCTGGAACA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTTGACGCGGATGCTCTaGGACTCGTTGATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPLTRML*DSLMAV
Trigger: CACCGCCATCAACGAGTCCCAGAGCATCCGCGTCAA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGGTTGTGCCGGGCATTaGAGTCCTTCAGCTTATCAA +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGGCAGH*SPSAYQ
Trigger: TTGATAAGCTGAAGGACTCCAATGCCCGGCACAACC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCGCCCGTCAGCGAGTTaGCAAACTTGCGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPRPSAS*QTCGCS
Trigger: TGAACAGCCGCAAGTTTGCCAACTCGCTGACGGGCG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCCTTCTCTTGAAACTTaGGCGGCTTCTCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNPSLET*AASPRC
Trigger: GCACCGTGGAGAAGCCGCCCAAGTTTCAAGAGAAGG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGCTCTCATCCGGGACTaGATGGTAAAAAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGALIRD*MVKSRT
Trigger: AGTTCTACTTTTTACCATCCAGTCCCGGATGAGAGC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATTCACTTTGTCCCCTTaGATGGCGATGTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGFTLSP*MAMSAS
Trigger: GGAAGCTGACATCGCCATCCAAGGGGACAAAGTGAA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGACTTCCAGAGTCGTTTaGACTGCTCCAGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEETSRVV*TAPVGP
Trigger: AGGCCCAACTGGAGCAGTCCAAACGACTCTGGAAGT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGCCAGGTCCTTCAGCTaGTCCCACTGTGCCGACACC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEARSFS*SHCADT
Trigger: GGTGTCGGCACAGTGGGACCAGCTGAAGGACCTGGC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGCCAGGTCCTTCAGCTaGTCCCACTGTGCCGACACC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTARSFS*SHCADT
Trigger: GGTGTCGGCACAGTGGGACCAGCTGAAGGACCTGGC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAAAGGTCTTCATCTCCTaGTCCAGGATGTCGAACCTG +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGKVFIS*SRMSNL
Trigger: CAGGTTCGACATCCTGGACCAGGAGATGAAGACCTT...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATAGCTTCCAGGGAGTCTaGGGGCTCCAAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDSFQGV*GLQVSQ
Trigger: CTGGCTCACTTGGAGCCCCCAGACTCCCTGGAAGCT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGAGCTCCTGGCAGTTCTaGAGGAAGTTCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVSSWQF*RKFCSS
Trigger: GGAGCTACAGAACTTCCTCCAGAACTGCCAGGAGCT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGACCAGGGCTGTAAACTaGGGCTTCTCATCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEETRAVN*GFSSIS
Trigger: GCTGATGGATGAGAAGCCCCAGTTTACAGCCCTGGT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTTGTTGAGGTCAGCATaGGTCTGCAAGCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNLLRSA*VCKRRS
Trigger: CGACCTGCGCTTGCAGACCCATGCTGACCTCAACAA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAGCTGTGTGCACCCGGTaGAAGGACTCGGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRAVCTR*KDSAVL
Trigger: CAGCACGGCCGAGTCCTTCCACCGGGTGCACACAGC...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACGGGTGGCCACGTCCTaGAACTGCTGCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTRVATS*NCCTWT
Trigger: TGTCCAGGTGCAGCAGTTCCAGGACGTGGCCACCCG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCTGTCTGCAGACGGGTaGCCACGTCCTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDLSADG*PRPGTA
Trigger: AGCAGTTCCAGGACGTGGCCACCCGTCTGCAGACAG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGATCTCCTCTGAGGCCTaGTGCTGCCGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEISSEA*CCRCSR
Trigger: CCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGAGAT...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTGCATCCCTCGAGAACTaGCACACCTCCAGCAACATG +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIASLEN*HTSSNM
Trigger: CATGTTGCTGGAGGTGTGCCAGTTCTCGAGGGATGC...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGGTCTCTCTGCAATCTaGCGTTCTTTCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGGLSAI*RSFSSS
Trigger: GCTTGAGCTGAAAGAACGCCAGATTGCAGAGAGACC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGTCGGTGGCCGCATGGTaGGAAACTGGAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNESVAAW*ETGASP
Trigger: AGGGGAGGCTCCAGTTTCCCACCATGCGGCCACCGA...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCTCTCGGTGGCCGCATaGTGGGAAACTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNELSVAA*WETGAS
Trigger: GGAGGCTCCAGTTTCCCACCATGCGGCCACCGAGAG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCTCTCGGTGGCCGCATaGTGGGAAACTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSLSVAA*WETGAS
Trigger: GGAGGCTCCAGTTTCCCACCATGCGGCCACCGAGAG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCTGCGGAAGCCCAGTaGGAAGGAGGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTSAEAQ*EGGWQL
Trigger: GAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGGGGAAGGCCATTCCTaGGGACGTTGGTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDGEGHS*GRWLQS
Trigger: GCTCTGCAACCAACGTCCCCAGGAATGGCCTTCCCC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACTGATTTGGCACACGTaGAAGGGGGAGGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTLIWHT*KGEGGP
Trigger: GGGCCCACCCTCCCCCTTCCACGTGTGCCAAATCAG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 72 bp TCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTaGAGGGAGATGTTTGCCACCATCTGCCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLGSLKTGPGKQ*REMFATICPSA
Trigger: TGCTGAAGGGCAGATGGTGGCAAACATCTCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGCTGCTGCAGGTTCTaGGGCCACGTTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTGCCRF*GHVPSS
Trigger: AGAAGAGGGAACGTGGCCTCAGAACCTGCAGCAGCC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCTCAAAGAGCCTGGCTaGGCTGTTGTCATTATCCAG +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEELKEPG*AVVIIQ
Trigger: CTGGATAATGACAACAGCTCAGCCAGGCTCTTTGAG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTTTCCCAGGCCCTGTTaGTGTCAGACACTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEFPRPC*CQTLVS
Trigger: GGAAACTAGTGTCTGACATCAACAGGGCCTGGGAAA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGTCCTTGCGGGCCGTaGTGCGCTTCTGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTCPCGP*CASGHG
Trigger: ACCATGACCAGAAGCGCATCACGGCCCGCAAGGACA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCGCGCAACCATGCCATaGGCCTCCTGGAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSRATMP*ASWKIC
Trigger: GCAGATCTTCCAGGAGGCTCATGGCATGGTTGCGCG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACCTTTGTCTTGTCCGTaGTCCACTTGCTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSPLSCP*STCWSP
Trigger: AGGAGACCAGCAAGTGGATCACGGACAAGACAAAGG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATCCTCTGGATGGCGATaGTACCTGCCAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSSGWR*YLPGPA
Trigger: GGCGGGACCTGGCAGGTATCATCGCCATCCAGAGGA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCGTCAATCTCATCCTTaGTACCTGCATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEERQSHP*YLHAAA
Trigger: TGCAGCAGCATGCAGGTATCAAGGATGAGATTGACG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTGTATTCCTGGTTGCTaGGGATGGCTTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNCIPGC*GWLQPA
Trigger: AGCAGGCTGAAGCCATCCTCAGCAACCAGGAATACA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACTCTGGGGGCTCCAAGTaGGCCAGAGTGTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDSGGSK*ARVYSW
Trigger: CCAGGAATACACTCTGGCTCACTTGGAGCCCCCAGA...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACGGATCTCATCGGAGATaGCGTAGAGCTCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDGSHRR*RRAPAR
Trigger: GCGAGCAGGAGCTCTACGTCATCTCCGATGAGATCC...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGGTCACGGGCCATGCTaGAGAAGCGGAATTTATCCG +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGGHGPC*RSGIYP
Trigger: CGGATAAATTCCGCTTCTTCAGCATGGCCCGTGACC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTTTCAATCTCTGCATTaGTGCCCTGGTGATACTTCA +
Preference number: 4 (lower is better)
Translates to: LARALGELSPGVAHTGSPFQSLH*CPGDTS
Trigger: TGAAGTATCACCAGGGCATCAATGCAGAGATTGAAA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGCTTTGTGGGCCACCTaGAGGCTCCTTCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEALWAT*RLLPHA
Trigger: GGCATGAGGAAGGAGCCTTCAGGTGGCCCACAAAGC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGAGGACGTGGAGAAGCTaGTCAAGGGGTACCACACCT +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGRTWRS*SRGTTP
Trigger: AGGTGTGGTACCCCTTGATCAGCTTCTCCACGTCCT...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTACCTCTGTACTCATGTaGCCCCCTCCCCGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSTSVLM*PPPRQD
Trigger: GTCTTGGCGGGGAGGGGGTCACATGAGTACAGAGGT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACTCAGGCTCCATCGGATaGCGTCTTCCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDSGSIG*RLPSCG
Trigger: GCCACAGGAAGGAAGACGTCATCCGATGGAGCCTGA...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCCTCACTTCAGGTGCTaGTTTGGCACACGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGPHFRC*FGTRGR
Trigger: CCTTCCACGTGTGCCAAATCAGCACCTGAAGTGAGG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGTGGAAGCACGGTTaGGCAGGTGGAGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTWWKHG*AGGGQD
Trigger: GTCCTGTCCTCCACCTGCTCAACCGTGCTTCCACCA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTCTCCTTGTCTTTCTTaGCGAGGCTGGCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSPCLS*RGWRRG
Trigger: GCCCCGACGCCAGCCTCGGCAAGAAAGACAAGGAGA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGACACTCGAGCCAGGTaGGAGTTCACCCATTTCGTG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEDTRAR*EFTHFV
Trigger: CACGAAATGGGTGAACTCGCACCTGGCTCGAGTGTC...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTCCAGGTGTACACGCTaGTCCTTGAGGAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISRCTR*SLRNWR
Trigger: TCTCCAGTTCCTCAAGGAGCAGCGTGTACACCTGGA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACCTTGCCGACACGCTTaGCCTCCACTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRPCRHA*PPLPAP
Trigger: AGGTGCTGGCAGTGGAGGGCAAGCGTGTCGGCAAGG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTATCCAGTCGATGCTGTaGAGCATGTCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIIQSML*SMSWKS
Trigger: GCTCTTCCAGGACATGCTGCACAGCATCGACTGGAT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTGAACTTCAGGGTGGCTaGGGTGATGGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIELQGG*GDGLHF
Trigger: AAAGTGAAGGCCATCACCGCAGCCACCCTGAAGTTC...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTAGCTCCTCAAAGCACTaGTCCAAGTGGCTGATGCGG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPSSSKH*SKWLMR
Trigger: CCGCATCAGCCACTTGGAGCAGTGCTTTGAGGAGCT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCAGAGTCGTTTGGACTaGTCCAGTTGGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDQSRLD*SSWAFR
Trigger: GCGGAAGGCCCAACTGGAGCAGTCCAAACGACTCTG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTCCTCAAAGGCCTTGTaGTTGCGCTGTAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEESSKAL*LRCKMS
Trigger: GCTCATCTTACAGCGCAAGCACAAGGCCTTTGAGGA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTGCGGGTGCCCAAACTaGTTGCGCGCAACCATGCCA +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSCGCPN*LRATMP
Trigger: TGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTAGCCGGTGGGCGTCTTaGAGCCAAGCCTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSRWAS*SQAFRS
Trigger: TGACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGGAATCCCTGGGCCTaGTGCTCCAGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHGNPWA*CSRCSI
Trigger: GATGGAGCACCTGGAGCAGCAGGCCCAGGGATTCCC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTAGATGGTCCTGGTACTaGTTCACCTCCCTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPRWSWY*FTSLLR
Trigger: ACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGATGGCGATGATACCTaGCAGGTCCCGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHDGDDT*QVPPQV
Trigger: GACCTGGGGCGGGACCTGGCAGGTATCATCGCCATC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACCAATATCCTCCTTCTaGTCAGGGTGCGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSPISSF*SGCESI
Trigger: GATGGACTCGCACCCTGAGCAGAAGGAGGATATTGG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGAGGATGGCTTCAGCCTaGTTGGCATCTTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEERMASA*LASFWN
Trigger: GTTCCAGAAAGATGCCAAGCAGGCTGAAGCCATCCT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTCGTCCCAGAGCCGGTaGAGGGCTTCCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVESSQSR*RASSFW
Trigger: CCAAAAGCTGGAAGCCCTGCACCGGCTCTGGGACGA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCTGGCAGCCGAGAGGTaGTGGGTCTTCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDLAAER*WVFSFV
Trigger: CACAAAGGAGAAGACCCAGCACCTCTCGGCTGCCAG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTAGGTCAGCATGGGTCTaGAAGCGCAGGTCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTRSAWV*KRRSEL
Trigger: GAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGGAACCGCTTCTCGATaGTCAAGTCTGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSGTASR*SSLHLL
Trigger: GAGGAGATGCAGACTTGAGCATCGAGAAGCGGTTCC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGAGCTGCTGCCCTCTCTaGAGCACATCCTCAACCCGC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNESCCPL*STSSTR
Trigger: GCGGGTTGAGGATGTGCTGCAGAGAGGGCAGCAGCT...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTACATGTTCTCCAGCTTaGGCTTGCGCTCTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPTCSPA*ACALPP
Trigger: TGGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGACGTGGTCAAAGTCTTaGCCCATTTCCGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTTWSKS*PISGEE
Trigger: CTCTTCCCCGGAAATGGGGCAAGACTTTGACCACGT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGAGCTCCAGGAGGTCTaGCCACATCTCGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSELQEV*PHLVQP
Trigger: GGGCTGAACGAGATGTGGGCAGACCTCCTGGAGCTC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGAGGCGGCCAGCAGCTaGATGCGCGTGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHEAASS*MRVSMS
Trigger: GCTCATTGACACGCGCATGCAGCTGCTGGCCGCCTC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTACGTCCTGGAACTGCTaGACCTGGACACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTTSWNC*TWTPSR
Trigger: CCTGCTGGGTGTCCAGGTGCAGCAGTTCCAGGACGT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACGGAGAGGAGGGCGTGTaGCTCAGAGAACCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDGEEGV*LREPFP
Trigger: AGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCTCATTCTGGATGCCTaGCCCTGTGGCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGLILDA*PCGFYL
Trigger: CAGGTAGAAGCCACAGGGGCAGGCATCCAGAATGAG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGTGGCTCCTGCCTGCTaGAGTTGGTGTCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTVAPAC*SWCHPD
Trigger: GTCAGGGTGACACCAACTGCAGCAGGCAGGAGCCAC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGAAGGAAGCCTGGTATaGTGGTGTGGACTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPEGSLV*WCGLEL
Trigger: CAGCTCCAGTCCACACCAGCATACCAGGCTTCCTTC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGTGTGCCCAACAGGGTTaGATTCCTCTGCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNECAQQG*IPLQPP
Trigger: CGGCGGCTGCAGAGGAATGCAACCCTGTTGGGCACA...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTGTGCCCAACAGGGTTaGATTCCTCTGCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSCAQQG*IPLQPP
Trigger: CGGCGGCTGCAGAGGAATGCAACCCTGTTGGGCACA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGGGTTGTGCCGGGCATTaGAGTCCTTCAGCTTATCAA +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEGCAGH*SPSAYQ
Trigger: TTGATAAGCTGAAGGACTCCAATGCCCGGCACAACC...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGGGATGATGCCCAGCTaGCGCTCAGCCACATTGAAT +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEGMMPS*RSATLN
Trigger: ATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCC...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCTTTGTCCCCTTGGATaGCGATGTCAGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVLCPLG*RCQLPS
Trigger: TGATGGAAGCTGACATCGCCATCCAAGGGGACAAAG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGGCATCGCCCTGGAACTaGAAAAAGTTCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEASPWN*KKFSAS
Trigger: GGATGCTGAGAACTTTTTCCAGTTCCAGGGCGATGC...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATCTTCGGGGAATCCCTaGGCCTGCTGCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSSGNP*ACCSRC
Trigger: GCACCTGGAGCAGCAGGCCCAGGGATTCCCCGAAGA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGAGGGCCTGCAGCCGATaGGTCACATCTGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNERACSR*VTSGES
Trigger: GGATTCCCCAGATGTGACCCATCGGCTGCAGGCCCT...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTCTCTACCAAGCTGTTaGCAGCGAGGTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVSLPSC*QRGSHH
Trigger: ATGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTCCCTGCTGCGTGGGTaGCCACTCTCTACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVESLLRG*PLSTKL
Trigger: CAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTATGGAGAGCCAGGCCTaGAAGTCATCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPMESQA*KSSRSC
Trigger: GCAGGATCTGGATGACTTCCAGGCCTGGCTCTCCAT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAGAGGCCACAGCCTTCTaGGTGATGGAGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKREATAF*VMESQA
Trigger: GGCCTGGCTCTCCATCACCCAGAAGGCTGTGGCCTC...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTACTCTGGGTCCGTCTaGCCTTGGATCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTYSGSV*PWITFS
Trigger: GGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTCAGAAGCAGATACTCTaGGTCCGTCTGGCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIQKQIL*VRLALD
Trigger: ATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTG...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAAGCTCCTGGCAGTTCTaGAGGAAGTTCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSSSWQF*RKFCSS
Trigger: GGAGCTACAGAACTTCCTCCAGAACTGCCAGGAGCT...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACAGGGCTTCCAGCTTTTaGGACACCAGGGCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNRASSF*DTRAVN
Trigger: GTTTACAGCCCTGGTGTCCCAAAAGCTGGAAGCCCT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGGGTCTTCTCCTTTGTaGTGGCCTGCAGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTGSSPL*WPAARP
Trigger: GGGACGAGCTGCAGGCCACCACAAAGGAGAAGACCC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACGCAGCCGAGAGGTGCTaGGTCTTCTCCTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDAAERC*VFSFVV
Trigger: CACCACAAAGGAGAAGACCCAGCACCTCTCGGCTGC...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTCGTCTGACCGCAGCTaGTCCTCCATGGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTSSDRS*SSMALI
Trigger: GATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTACTGCTGTGCCTCGTTaGCGTCCCTCAGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSTAVPR*RPSVAA
Trigger: TGCAGCGACTGAGGGACGCCAACGAGGCACAGCAGT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCGCAGAAGAGTCACGTaGTCAAAGTCTTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEERRRVT*SKSCPI
Trigger: AATGGGGCAAGACTTTGACCACGTGACTCTTCTGCG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATCATCTCTTTCCTCCTaGACATCACCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSSLSS*TSPAAV
Trigger: AACTGCAGCAGGTGATGTCCAGGAGGAAAGAGATGA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCTGCCCAGCTGGCCGTaGACTTCTCAAAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGLPSWP*TSQKPH
Trigger: ATGAGGCTTTTGAGAAGTCCACGGCCAGCTGGGCAG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCTTTCAGCTCAAGCGTaGTGGGCTTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDLSAQA*WASPGQ
Trigger: CTGCCCTGGAGAAGCCCACCACGCTTGAGCTGAAAG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGGACGTTCTCTCGGTaGCCGCATGGTGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGTFSR*PHGGKL
Trigger: CAGTTTCCCACCATGCGGCCACCGAGAGAACGTCCC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACGGTGATACCAAGACATaGCTGCGTCTGCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDGDTKT*LRLPPR
Trigger: TCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACC...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTGGTTGCAGAGCTTCTaGTGCTCAGGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDWLQSF*CSGLEG
Trigger: ACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAACCA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCATTTTCAGTCTAGTTaGTCGAATGTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPHFQSS*SNVLEP
Trigger: AGGCTCCAAGACATTCGACCAACTAGACTGAAAATG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACAGCCACCAAGCCATGTaGTCCCGCTGGCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDSHQAM*SRWLHP
Trigger: AGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCTGCCTCAGTCTTCATaGAAGGATCCCTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDLPQSS*KDPCPG
Trigger: CCCAGGGCAGGGATCCTTCCATGAAGACTGAGGCAG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCCTTGTAGAGATCGGTaGTGCGGCAGGACACTCGAG +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTPCRDR*CGRTLE
Trigger: CTCGAGTGTCCTGCCGCATCACCGATCTCTACAAGG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCCTTGTAGAGATCGGTaGTGCGGCAGGACACTCGAG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSPCRDR*CGRTLE
Trigger: CTCGAGTGTCCTGCCGCATCACCGATCTCTACAAGG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGCGCTCAGCCACATTaGATGCGTGCTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTGAQPH*MRAPGC
Trigger: ACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGCGCTCAGCCACATTaGATGCGTGCTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGAQPH*MRAPGC
Trigger: ACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTGTCCTTGCGGGCCGTaGTGCGCTTCTGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHCPCGP*CASGHG
Trigger: ACCATGACCAGAAGCGCATCACGGCCCGCAAGGACA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAACAAGAGGTGAGCCTTaGTCTCATCCATCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSTRGEP*SHPSSR
Trigger: TCGACTGGATGGATGAGATCAAGGCTCACCTCTTGT...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGCTTGCGCTGTAAGATaGGCACACTGGTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPACAVR*AHWSGL
Trigger: AAGACCTGACCAGTGTGCTCATCTTACAGCGCAAGC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTCTGGGGGCTCCAAGTaGGCCAGAGTGTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSGGSK*ARVYSW
Trigger: CCAGGAATACACTCTGGCTCACTTGGAGCCCCCAGA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTCCCTCCTCTCCCATTaGAGGCACCTGGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSLLSH*RHLGKQ
Trigger: CTGTTTGCCCAGGTGCCTTCAATGGGAGAGGAGGGA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCAGCTTGGCTCTGGATaGTTCCAGCTGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPQLGSG*FQLLLP
Trigger: AGGAAGAAGCAGCTGGAATCATCCAGAGCCAAGCTG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACCACCAGGTGGGAGGTaGCCCGAAGCAAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRPPGGR*PEARLA
Trigger: AGCAAGTCTTGCTTCGGGTCACCTCCCACCTGGTGG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCTGTCACATGGGTGGTaGTACCAAGACATGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDLSHGW*YQDMAA
Trigger: CGCAGCCATGTCTTGGTATCACCACCCATGTGACAG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTAAGGTGATAGAAACTTaGCTGCAGGCCCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPKVIET*LQALGT
Trigger: AGTCCCCAGGGCCTGCAGTCAAGTTTCTATCACCTT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACACAGCCAGAGTCAGTTaGGGCTGGGACAAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDTARVS*GWDKGE
Trigger: TTCCCCTTTGTCCCAGCCTCAACTGACTCTGGCTGT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTCCTCATTTCCTCCCTaGGCTTGTTTGTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISSFPP*ACLSKP
Trigger: TGGCTTGGACAAACAAGCTCAGGGAGGAAATGAGGA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGGACCAGGCGGTGGTTaGCATCTACAATGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEGPGGG*HLQCRG
Trigger: CCCACGACATTGTAGATGGCAACCACCGCCTGGTCC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTATCAGGTCGGGCCGGTaGTTGTGTATCAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPIRSGR*LCIRAL
Trigger: TAATGCCCTGATACACAAGCACCGGCCCGACCTGAT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGCTCTAGCTTCTCCTaGCGAATGAGCTCATTTCTC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEECSSFS*RMSSFL
Trigger: GAGAAATGAGCTCATTCGGCAGGAGAAGCTAGAGCA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGTCTCGATGGCCTCATaGTTCTTCTTGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEVSMAS*FFLAAS
Trigger: GGAGGCCGCCAAGAAGAAGCATGAGGCCATCGAGAC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGAAGAGCTTCTGCAGTaGCAGGGTGGTCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSEELLQ*QGGLEP
Trigger: AGGCTCGAGACCACCCTGGCACTGCAGAAGCTCTTC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTCCTGGAAGAGCTTCTaGAGTGCCAGGGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSWKSF*SARVVS
Trigger: CGAGACCACCCTGGCACTGCAGAAGCTCTTCCAGGA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTATCCAGTCGATGCTGTaGAGCATGTCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPIQSML*SMSWKS
Trigger: GCTCTTCCAGGACATGCTGCACAGCATCGACTGGAT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAACTTCAGGGTGGCTaGGGTGATGGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEELQGG*GDGLHF
Trigger: AAAGTGAAGGCCATCACCGCAGCCACCCTGAAGTTC...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGCCCAGCTGCCATGTTaGTCAGCTCCTCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDAQLPC*SAPQST
Trigger: AGTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGCTTGCGCGCAACCATaGCATGAGCCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEACAQP*HEPPGR
Trigger: TCTTCCAGGAGGCTCATGGCATGGTTGCGCGCAAGC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGGTGCCCAAACTGCTTaGGCGCAACCATGCCATGAG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTGAQTA*AQPCHE
Trigger: CTCATGGCATGGTTGCGCGCAAGCAGTTTGGGCACC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTGCGGGTGCCCAAACTaGTTGCGCGCAACCATGCCA +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHCGCPN*LRATMP
Trigger: TGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAAGGATGTCGAACCTGTaGTGCACGACCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTRMSNL*CTTSRS
Trigger: GGACCTGGAGGTCGTGCAGCACAGGTTCGACATCCT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACAGATGGTCCTGGTACTaGTTCACCTCCCTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDRWSWY*FTSLLR
Trigger: ACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTCCTTGATACCTGCATaGTGCTGCAGGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPSLIPA*CCRSCS
Trigger: TGAGCAGCTCCTGCAGCAGCATGCAGGTATCAAGGA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTCGTTGTTCTTCCTGTaGCTGTCCTCAATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTSLFFL*LSSISC
Trigger: GCAGCTGATTGAGGACAGGCACAGGAAGAACAACGA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGGCCTCAGCCTCGTCTaGATCCAGGTAGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTGLSLV*IQVVLL
Trigger: CAGCAGTACTACCTGGATGCAGACGAGGCTGAGGCC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTCCTCCACCGCACGCTaGTGCCGCAAATGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHSSTAR*CRKCRF
Trigger: GAAGCGACATTTGCGGCAGCAGCGTGCGGTGGAGGA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCATTTTCTGAAATCCACTaGTCCAGGTCGTCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSFSEIH*SRSSVS
Trigger: GGAGACCGACGACCTGGAGCAGTGGATTTCAGAAAA...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCTTCTCCCCAGCATATaGTGTCTGCAGACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVELLPSI*CLQTGG
Trigger: GCCACCCGTCTGCAGACAGCATATGCTGGGGAGAAG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACTTCTCCCCAGCATATaGTGTCTGCAGACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTLLPSI*CLQTGG
Trigger: GCCACCCGTCTGCAGACAGCATATGCTGGGGAGAAG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTATTGCTGGTTTGGCTaGCACTGGGAGTGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEYCWFG*HWEWGE
Trigger: CTCGCCCCACTCCCAGTGGCAGCCAAACCAGCAATA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGATACCAAGACATGGCTaGGTCTGCCACCCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGIPRHG*VCHPEK
Trigger: TTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTAT...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCCCGACCCGCTTGACTaGTCTCTTGGACCTAACCCT +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEPDPLD*SLGPNP
Trigger: AGGGTTAGGTCCAAGAGAGCAGTCAAGCGGGTCGGG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGGGCCTCATTCTGGATaGCTGCCCCTGTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEGPHSG*LPLWLL
Trigger: TAGAAGCCACAGGGGCAGGCATCCAGAATGAGGCCC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACCTGTGGCTCCTGCCTaGTGCAGTTGGTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRPVAPA*CSWCHP
Trigger: AGGGTGACACCAACTGCAGCAGGCAGGAGCCACAGG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGAGAGGAGGACATGCCTaGAAGTGCACCAAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGRGGHA*KCTKGL
Trigger: TAGGCCTTTGGTGCACTTGCAGGCATGTCCTCCTCT...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGGTTGCTTGCTGGAAATaGCTCACTTCAGGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVVACWK*LTSGAD
Trigger: ATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAAC...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTAGGGTTGCATTCCTCTaGAGCCGCCGCCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTRVAFL*SRRLLI
Trigger: AATGAGGAGGCGGCGGCTGCAGAGGAATGCAACCCT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTGTTCCAGGACCTGTTaGAAGCCTTCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPCSRTC*KPSCWA
Trigger: GGCCCAACAAGAAGGCTTCCAACAGGTCCTGGAACA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCAGCAATCTCACAGATaGCATGTCTCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDQQSHR*HVSGPG
Trigger: CCCTGGCCCTGAGACATGCCATCTGTGAGATTGCTG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGCATCTTCCCCTTGGTaGGCTTTGGCAGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDASSPW*ALAASL
Trigger: GAGAGATGCTGCCAAAGCCCACCAAGGGGAAGATGC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGACATTCTCCAGGCAGTaGATGCGCATCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGETFSRQ*MRIFPL
Trigger: CAAGGGGAAGATGCGCATCCACTGCCTGGAGAATGT...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACCCAGGACCAGGCGGTaGTTGCCATCTACAATGTCG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTPRTRR*LPSTMS
Trigger: CGACATTGTAGATGGCAACCACCGCCTGGTCCTGGG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCCTTCTCTTGAAACTTaGGCGGCTTCTCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDPSLET*AASPRC
Trigger: GCACCGTGGAGAAGCCGCCCAAGTTTCAAGAGAAGG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGCTTTGTCCCCTTGGATaGCGATGTCAGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTLCPLG*RCQLPS
Trigger: TGATGGAAGCTGACATCGCCATCCAAGGGGACAAAG...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTGCATCGCCCTGGAACTaGAAAAAGTTCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIASPWN*KKFSAS
Trigger: GGATGCTGAGAACTTTTTCCAGTTCCAGGGCGATGC...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTCTCTACCAAGCTGTTaGCAGCGAGGTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISLPSC*QRGSHH
Trigger: ATGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTCCCTGCTGCGTGGGTaGCCACTCTCTACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHSLLRG*PLSTKL
Trigger: CAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACACCTCCCTGCTGCGTaGGTGGCCACTCTCTACCAA +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRHLPAA*VATLYQ
Trigger: TTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGCCCCAGGTCTTTTGTaGACTCCACTACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNAPGLL*TPLPLS
Trigger: AGACAAAGGTAGTGGAGTCCACAAAAGACCTGGGGC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGCCTGACAACTTCCTCTaGATGGCGATGATACCTGCC +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEPDNFL*MAMIPA
Trigger: GGCAGGTATCATCGCCATCCAGAGGAAGTTGTCAGG...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTACTCTGGGTCCGTCTaGCCTTGGATCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPYSGSV*PWITFS
Trigger: GGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGCAGAAGCAGATACTCTaGGTCCGTCTGGCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEQKQIL*VRLALD
Trigger: ATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTG...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGCAGAGAGTGAGCTCCTaGCAGTTCTGGAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEQRVSS*QFWRKF
Trigger: GAACTTCCTCCAGAACTGCCAGGAGCTCACTCTCTG...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCATTCTGCAGTGTCTaGTTCTTCTTCATGAACAGT +
Preference number: 4 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSFCSV*FFFMNS
Trigger: ACTGTTCATGAAGAAGAACCAGACACTGCAGAATGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGCTTCAGCATCACAATaGCGCCCTCTTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPASASQ*RPLHPW
Trigger: CCAAGGATGAAGAGGGCGCCATTGTGATGCTGAAGC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGAGCGCTCTGCCCAGCTaGCCGTGGACTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNESALPS*PWTSQK
Trigger: CTTTTGAGAAGTCCACGGCCAGCTGGGCAGAGCGCT...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGGTGATACCAAGACATaGCTGCGTCTGCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTGDTKT*LRLPPR
Trigger: TCGGGGTGGCAGACGCAGCCATGTCTTGGTATCACC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTGGTTGCAGAGCTTCTaGTGCTCAGGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTWLQSF*CSGLEG
Trigger: ACCCTCCAGCCCTGAGCACCAGAAGCTCTGCAACCA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCATTCCTGGGGACGTTaGTTGCAGAGCTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDHSWGR*LQSFWC
Trigger: GCACCAGAAGCTCTGCAACCAACGTCCCCAGGAATG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGATTTCTGCCGGCACTaGTCAGCACTCAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDDFCRH*SALRVP
Trigger: AGGAACCCTGAGTGCTGACCAGTGCCGGCAGAAATC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGAGCTGGCAACAGAATaGTCACATGCAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDELATE*SHAAGC
Trigger: GCAGCCAGCTGCATGTGACCATTCTGTTGCCAGCTC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGGAAGCCTGGTATGCTaGTGTGGACTGGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDGSLVC*CGLELC
Trigger: ACACAGCTCCAGTCCACACCAGCATACCAGGCTTCC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACAACGCATCCTTGGCTaGGCGTGTTTCACGACCTTC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTQRILG*ACFTTF
Trigger: GAAGGTCGTGAAACACGCTCAGCCAAGGATGCGTTG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCAACGCATCCTTGGCTaGGCGTGTTTCACGACCTTC +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEQRILG*ACFTTF
Trigger: GAAGGTCGTGAAACACGCTCAGCCAAGGATGCGTTG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGCTTCTCCTGCCGAATaGGCTCATTTCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTASPAE*AHFSGP
Trigger: TGGCCCTGAGAAATGAGCTCATTCGGCAGGAGAAGC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGCTTCTCCTGCCGAATaGGCTCATTTCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEASPAE*AHFSGP
Trigger: TGGCCCTGAGAAATGAGCTCATTCGGCAGGAGAAGC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTGTATTCCTGGTTGCTaGGGATGGCTTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDCIPGC*GWLQPA
Trigger: AGCAGGCTGAAGCCATCCTCAGCAACCAGGAATACA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATCCCTCCTCTCCCATTaGAGGCACCTGGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSLLSH*RHLGKQ
Trigger: CTGTTTGCCCAGGTGCCTTCAATGGGAGAGGAGGGA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGGTCACGGGCCATGCTaGAGAAGCGGAATTTATCCG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTGHGPC*RSGIYP
Trigger: CGGATAAATTCCGCTTCTTCAGCATGGCCCGTGACC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACTGTCACATGGGTGGTaGTACCAAGACATGGCTGCG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTLSHGW*YQDMAA
Trigger: CGCAGCCATGTCTTGGTATCACCACCCATGTGACAG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCCAGAAGTATGACCTaGGCAGCAAGGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTSRSMT*AARGRP
Trigger: TGGCCTTCCCCTTGCTGCTCAGGTCATACTTCTGGA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGACCTAACCCTAGTTTaGTACTGGGCCAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGDLTLV*YWARTV
Trigger: CACAGTTCTGGCCCAGTATCAAACTAGGGTTAGGTC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATCAGGCTCCATCGGATaGCGTCTTCCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSGSIG*RLPSCG
Trigger: GCCACAGGAAGGAAGACGTCATCCGATGGAGCCTGA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTACAGAAAGAGGCTGGTaGGTGATACACACTAGGTTC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDITERGW*VIHTRF
Trigger: GAACCTAGTGTGTATCACTCACCAGCCTCTTTCTGT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTACTTTATTGCTAGGTaGGTGCAGTCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIYFIAR*VQSPHC
Trigger: GCAGTGAGGTGACTGCACTCACCTAGCAATAAAGTA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGAAGAGCCACTCGCTaGCATTACTCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGRATR*HYSASA
Trigger: AGCTGAGGCTGAGTAATGGCAGCGAGTGGCTCTTCC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTCTCCTCCTCATCCTTaGCATGGAAGAGCCACTCGC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSPPHP*HGRATR
Trigger: GCGAGTGGCTCTTCCATGGCAAGGATGAGGAGGAGA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGACACTCGAGCCAGGTaGGAGTTCACCCATTTCGTG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSDTRAR*EFTHFV
Trigger: CACGAAATGGGTGAACTCGCACCTGGCTCGAGTGTC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATATCAGGTCGGGCCGGTaGTTGTGTATCAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDIRSGR*LCIRAL
Trigger: TAATGCCCTGATACACAAGCACCGGCCCGACCTGAT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCTCAGCCACATTGAATaGGTGCTCCAGGTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVELSHIE*VLQVVP
Trigger: CGGCACAACCTGGAGCACGCATTCAATGTGGCTGAG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGAAGAGCTTCTGCAGTaGCAGGGTGGTCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHEELLQ*QGGLEP
Trigger: AGGCTCGAGACCACCCTGGCACTGCAGAAGCTCTTC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCACTGGTCAGGTCTTTaGCATAGTCCAGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNHWSGL*HSPGKN
Trigger: ATTCTTCCCTGGACTATGGCAAAGACCTGACCAGTG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCCAATATCCTCCTTCTaGTCAGGGTGCGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDPISSF*SGCESI
Trigger: GATGGACTCGCACCCTGAGCAGAAGGAGGATATTGG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAAAGTCATCCAGATCCTaGAGGAAGGCCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTKSSRS*RKACSW
Trigger: CCAGCTGCAGGCCTTCCTGCAGGATCTGGATGACTT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACTGTCCTCAATCAGCTaGACCTTCTCCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSLSSIS*TFSLIL
Trigger: CAAGATCAAGGAGAAGGTGCAGCTGATTGAGGACAG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGATGGGAAGCCAGCTCTaGCACAAACGCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEMGSQL*HKRLVL
Trigger: AAGCACCAGGCGTTTGTGGCAGAGCTGGCTTCCCAT...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGCAGCCGAGAGGTaGTGGGTCTTCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRLAAER*WVFSFV
Trigger: CACAAAGGAGAAGACCCAGCACCTCTCGGCTGCCAG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGGAACCGCTTCTCGATaGTCAAGTCTGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDGTASR*SSLHLL
Trigger: GAGGAGATGCAGACTTGAGCATCGAGAAGCGGTTCC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCCCAGAATCTCATTCTaGAGTGTCTGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVPRISF*SVWFFF
Trigger: GAAGAAGAACCAGACACTGCAGAATGAGATTCTGGG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATACGTGGTCAAAGTCTTaGCCCATTTCCGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDTWSKS*PISGEE
Trigger: CTCTTCCCCGGAAATGGGGCAAGACTTTGACCACGT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACACGTGGTCAAAGTCTTaGCCCATTTCCGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDTWSKS*PISGEE
Trigger: CTCTTCCCCGGAAATGGGGCAAGACTTTGACCACGT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGTTCTGGATGGCCTCTaGCTTCTCCCCAGCATATGC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSVLDGL*LLPSIC
Trigger: GCATATGCTGGGGAGAAGGCAGAGGCCATCCAGAAC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACCGGGTTTCAATCTCTaGATTGATGCCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSPGFNL*IDALVI
Trigger: TATCACCAGGGCATCAATGCAGAGATTGAAACCCGG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCTGGACATCACCTGCTaGAGTTTCTCGCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTLDITC*SFSRIS
Trigger: GGAGATCCGCGAGAAACTGCAGCAGGTGATGTCCAG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCTCCTGGACATCACCTaGTGCAGTTTCTCGCGGATC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSLLDIT*CSFSRI
Trigger: GATCCGCGAGAAACTGCAGCAGGTGATGTCCAGGAG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCAGATCAGAGCCCTGTaGCCTAGCCACGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDQIRAL*PSHGFQ
Trigger: TTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCATTTGGCTTTGGGATaGTTTACTGCAGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDHLALG*FTAGAG
Trigger: CCCCGCACCTGCAGTAAAGCATCCCAAAGCCAAATG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACCTGGGGACGTTGGTTaGAGAGCTTCTGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRPGDVG*RASGAQ
Trigger: CTGAGCACCAGAAGCTCTGCAACCAACGTCCCCAGG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGAGCTTCCTCTAAACTaGCCTGGGAAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEELPLN*PGKEAW
Trigger: CCAGGCTTCCTTCCCAGGGCAGTTTAGAGGAAGCTC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGAAGCCTTCTTGTTaGGCCCCTCCAGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTWKPSC*APPGHA
Trigger: AGCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTCCTCATCCTTGCCATaGAAGAGCCACTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVESSSLP*KSHSLP
Trigger: TGGCAGCGAGTGGCTCTTCCATGGCAAGGATGAGGA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTTGACGCGGATGCTCTaGGACTCGTTGATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHLTRML*DSLMAV
Trigger: CACCGCCATCAACGAGTCCCAGAGCATCCGCGTCAA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTGCGCATCTTCCCCTTaGTGGGCTTTGGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVECASSP*WALAAS
Trigger: AGATGCTGCCAAAGCCCACCAAGGGGAAGATGCGCA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGTCAGTCTCAATGGCATaGTCAATAACCTTGCCGACA +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVSVSMA*SITLPT
Trigger: TGTCGGCAAGGTTATTGACCATGCCATTGAGACTGA...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACGCCCGTCAGCGAGTTaGCAAACTTGCGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRRPSAS*QTCGCS
Trigger: TGAACAGCCGCAAGTTTGCCAACTCGCTGACGGGCG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGACACTTTCTGATTGTTaGCTCTCATCCGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTTLSDC*LSSGTG
Trigger: TCCAGTCCCGGATGAGAGCCAACAATCAGAAAGTGT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCCTCATGCTTCTTCTTaGCGGCCTCCACAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHPHASS*RPPQLP
Trigger: TGGCAGCTGTGGAGGCCGCCAAGAAGAAGCATGAGG...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCCGTGTCGGTCTCGATaGCCTCATGCTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEPCRSR*PHASSW
Trigger: CCAAGAAGAAGCATGAGGCCATCGAGACCGACACGG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACTGTGCAGCATGTCCTaGAAGAGCTTCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTLCSMS*KSFCSA
Trigger: GGCACTGCAGAAGCTCTTCCAGGACATGCTGCACAG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCTGTGCAGCATGTCCTaGAAGAGCTTCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNELCSMS*KSFCSA
Trigger: GGCACTGCAGAAGCTCTTCCAGGACATGCTGCACAG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTTCACTTTGTCCCCTTaGATGGCGATGTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGFTLSP*MAMSAS
Trigger: GGAAGCTGACATCGCCATCCAAGGGGACAAAGTGAA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGTCCTCCAGGGTGTCTaGCATTTCCATCTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHVLQGV*HFHLGQ
Trigger: CTGGCCGAGATGGAAATGCCAGACACCCTGGAGGAC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAGGGTCCGTCTGGCCTTaGATCACTTTCTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRGSVWP*ITFSPD
Trigger: GTCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCC...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTTTCGCACATTCACTTaGTCCTCCACTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPFRTFT*SSTRFS
Trigger: GCTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCTGCAGCTTGGCTCTaGATGATTCCAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSAAWL*MIPAAS
Trigger: AGAAGCAGCTGGAATCATCCAGAGCCAAGCTGCAGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCGCAGAAGAGTCACGTaGTCAAAGTCTTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPRRRVT*SKSCPI
Trigger: AATGGGGCAAGACTTTGACCACGTGACTCTTCTGCG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCATCATCTCTTTCCTCCTaGACATCACCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSSSLSS*TSPAAV
Trigger: AACTGCAGCAGGTGATGTCCAGGAGGAAAGAGATGA...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGCATCCCTCGAGAACTaGCACACCTCCAGCAACATG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEASLEN*HTSSNM
Trigger: CATGTTGCTGGAGGTGTGCCAGTTCTCGAGGGATGC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATATGCCCCTAGGGGGCTaGCCATGCATTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHMPLGG*PCISSV
Trigger: GACACTGGAAATGCATGGCCAGCCCCCTAGGGGCAT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTATCCATCTTATATCTaGGGGCCCACACTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGYPSYI*GPTLSR
Trigger: ACGGGACAGTGTGGGCCCCCAGATATAAGATGGATA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCTTCAGGTGCTGATTTaGCACACGTGGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNELQVLI*HTWKGE
Trigger: CTCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGAGCTGGCAACAGAATaGTCACATGCAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEELATE*SHAAGC
Trigger: GCAGCCAGCTGCATGTGACCATTCTGTTGCCAGCTC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACCTGGTATGCTGGTGTaGACTGGAGCTGTGTCAACC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTPGMLV*TGAVST
Trigger: GGTTGACACAGCTCCAGTCCACACCAGCATACCAGG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGATAACGTCATGTCACTaGGCTGGCCTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEITSCH*AGLFPL
Trigger: CAGAGGAAACAGGCCAGCCCAGTGACATGACGTTAT...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCTCAAAGAGCCTGGCTaGGCTGTTGTCATTATCCAG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDLKEPG*AVVIIQ
Trigger: CTGGATAATGACAACAGCTCAGCCAGGCTCTTTGAG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTGGACCACAATGTCCTaGATCTGGAAGCGGAGGATG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEWTTMS*IWKRRM
Trigger: CATCCTCCGCTTCCAGATTCAGGACATTGTGGTCCA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTGGACCACAATGTCCTaGATCTGGAAGCGGAGGATG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSWTTMS*IWKRRM
Trigger: CATCCTCCGCTTCCAGATTCAGGACATTGTGGTCCA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGAAGTGTTTTTGCCGCTaGCCAATATCCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KLITSCHWAGLFPLRCGEKCFCR*PISSFC
Trigger: GCAGAAGGAGGATATTGGTCAGCGGCAAAAACACTT...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTAAGTGTTTTTGCCGCTaGCCAATATCCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPKCFCR*PISSFC
Trigger: GCAGAAGGAGGATATTGGTCAGCGGCAAAAACACTT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGTATTCCTGGTTGCTaGGGATGGCTTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTCIPGC*GWLQPA
Trigger: AGCAGGCTGAAGCCATCCTCAGCAACCAGGAATACA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCAGTTGGTGTCACCCTaGCATATAGTGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTQLVSP*HIVSGP
Trigger: TGGCCCTGACACTATATGTCAGGGTGACACCAACTG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACTGTACCAAAGCCAAATaGAGACCTTGCTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDCTKAK*RPCSPG
Trigger: CCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACA...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAGGAAGAGCCACTCGCTaGCATTACTCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRGRATR*HYSASA
Trigger: AGCTGAGGCTGAGTAATGGCAGCGAGTGGCTCTTCC...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATCTCCTCCTCATCCTTaGCATGGAAGAGCCACTCGC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSPPHP*HGRATR
Trigger: GCGAGTGGCTCTTCCATGGCAAGGATGAGGAGGAGA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAGACACTCGAGCCAGGTaGGAGTTCACCCATTTCGTG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRDTRAR*EFTHFV
Trigger: CACGAAATGGGTGAACTCGCACCTGGCTCGAGTGTC...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGCTTCCATCAACTTGTaGTTCTGTAGCAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SALWGGVEEASTLMKNTSASINL*FCSRSS
Trigger: TGAAGACCTGCTACAGAAGCACAAGTTGATGGAAGC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAATGGGAAGCCAGCTCTaGCACAAACGCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRMGSQL*HKRLVL
Trigger: AAGCACCAGGCGTTTGTGGCAGAGCTGGCTTCCCAT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTAAGTCCCGGCTGATCTaGAGCTTGGCTCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTKSRLI*SLALDD
Trigger: ATCATCCAGAGCCAAGCTGCAGATCAGCCGGGACTT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCCCAGAATCTCATTCTaGAGTGTCTGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNPRISF*SVWFFF
Trigger: GAAGAAGAACCAGACACTGCAGAATGAGATTCTGGG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCCGGGTTTCAATCTCTaGATTGATGCCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGPGFNL*IDALVI
Trigger: TATCACCAGGGCATCAATGCAGAGATTGAAACCCGG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCTCCTGGACATCACCTaGTGCAGTTTCTCGCGGATC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHLLDIT*CSFSRI
Trigger: GATCCGCGAGAAACTGCAGCAGGTGATGTCCAGGAG...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCTCTGCGGGTCTCTCTaGAATCTGGCGTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVELCGSL*NLAFFQ
Trigger: CTGAAAGAACGCCAGATTGCAGAGAGACCCGCAGAG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCATTTGGCTTTGGGATaGTTTACTGCAGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEHLALG*FTAGAG
Trigger: CCCCGCACCTGCAGTAAAGCATCCCAAAGCCAAATG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCTCCAAAGTCCCAGCTaGAGACAGGATGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDLQSPS*RQDAIE
Trigger: CTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTATACCAAGACATGGCTaGGTCTGCCACCCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSIPRHG*VCHPEK
Trigger: TTTCTCGGGGTGGCAGACGCAGCCATGTCTTGGTAT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCATTTGTCCCAGTTGTaGAGGAGTAGCTGTCACATG +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGHLSQL*RSSCHM
Trigger: CATGTGACAGCTACTCCTGCACAACTGGGACAAATG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATAGATTGCATGGTCTGTaGCCAACAGGGTTGCATTCC +
Preference number: 4 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDRLHGL*PTGLHS
Trigger: GGAATGCAACCCTGTTGGGCACAGACCATGCAATCT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGCCTCTCATCCCCAGTaGATTTCTGCCCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTASHPQ*ISAHPC
Trigger: ACAAGGATGGGCAGAAATCCACTGGGGATGAGAGGC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCCAGGGCCAGGTTCTTaGCATCCTTGTAGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDPGPGS*HPCRRL
Trigger: TAACCTTCTACAAGGATGCCAAGAACCTGGCCCTGG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCATTTTCAAACTCTGTaGCCGATGTCATGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNHFQTL*PMSCQQ
Trigger: CTGCTGACATGACATCGGCCACAGAGTTTGAAAATG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGGGATGATGCCCAGCTaGCGCTCAGCCACATTGAAT +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHGMMPS*RSATLN
Trigger: ATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTCAGTCTCAATGGCATaGTCAATAACCTTGCCGACA +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTSVSMA*SITLPT
Trigger: TGTCGGCAAGGTTATTGACCATGCCATTGAGACTGA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTACCCAAAGTTATCCTaGGCCACGAGGCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSYPKLS*ATRRWF
Trigger: AAACCAGCGCCTCGTGGCCCAGGATAACTTTGGGTA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAAAGCACTGCTCCAAGTaGCTGATGCGGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRKHCSK*LMRSWM
Trigger: CATCCAGGACCGCATCAGCCACTTGGAGCAGTGCTT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTACTTCCAGAGTCGTTTaGACTGCTCCAGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTTSRVV*TAPVGP
Trigger: AGGCCCAACTGGAGCAGTCCAAACGACTCTGGAAGT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACAAGGTCTTCATCTCCTaGTCCAGGATGTCGAACCTG +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDKVFIS*SRMSNL
Trigger: CAGGTTCGACATCCTGGACCAGGAGATGAAGACCTT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTCTGCCACAAACGCCTaGTGCTTTAGCCATTTATTG +
Preference number: 4 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTSATNA*CFSHLL
Trigger: CAATAAATGGCTAAAGCACCAGGCGTTTGTGGCAGA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTCTAGCCACCCTTCATaGGAAGCCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHSSHPS*EASSAT
Trigger: TGTGGCAGAGCTGGCTTCCCATGAAGGGTGGCTAGA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTACCAGGGCTGTAAACTaGGGCTTCTCATCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTTRAVN*GFSSIS
Trigger: GCTGATGGATGAGAAGCCCCAGTTTACAGCCCTGGT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAAGGGCTTCCAGCTTTTaGGACACCAGGGCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTRASSF*DTRAVN
Trigger: GTTTACAGCCCTGGTGTCCCAAAAGCTGGAAGCCCT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTCCTGCTCCTTGTTCTaGATGGCCTCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHSCSLF*MASAFS
Trigger: GGAGAAGGCAGAGGCCATCCAGAACAAGGAGCAGGA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCATCTCTTTCCTCCTaGACATCACCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSSLSS*TSPAAV
Trigger: AACTGCAGCAGGTGATGTCCAGGAGGAAAGAGATGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCTTGACTGCAGGCCCTaGGGACTTTCATGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTLDCRP*GLSWFP
Trigger: AGGAAACCATGAAAGTCCCCAGGGCCTGCAGTCAAG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAAGGCTCCCTAAAGACTaGCCCAGGGAAACAGTTGAG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTRLPKD*PRETVE
Trigger: CTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTGTGGAGTTGCTTGCTaGAAATGCCTCACTTCAGGT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPCGVAC*KCLTSG
Trigger: ACCTGAAGTGAGGCATTTCCAGCAAGCAACTCCACA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGATGTGTGGGGAGCTaGCAACAGAATGGTCACATG +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTGCVGS*QQNGHM
Trigger: CATGTGACCATTCTGTTGCCAGCTCCCCACACATCC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 72 bp GACCCGCTTGACTGCTCTCTTGGACCTAACCCTAGTTaGATACTGGGCCAGAACTGTGTTGCTTTCGGAGTA +
Preference number: 4 (lower is better)
Translates to: DPLDCSLGPNPS*ILGQNCVAFGV
Trigger: TACTCCGAAAGCAACACAGTTCTGGCCCAGTATCAAACTAGGGTTAGGTCCAAGAGAGCAGTCAAGCGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
3UTR CAA 72 bp AGGACATGCCTGCAAGTGCACCAAAGGCCTACTTTATaGCTAGGTGAGTGCAGTCACCTCACTGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RTCLQVHQRPTL*LGECSHLTALV
Trigger: AACCAAGGCAGTGAGGTGACTGCACTCACCTAGCAATAAAGTAGGCCTTTGGTGCACTTGCAGGCATGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACTTAGCTCACTGTTCCTaGGCACACAGTACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDLAHCS*AHSTGC
Trigger: ACAACCTGTACTGTGTGCTCAGGAACAGTGAGCTAA...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCTCAAAGAGCCTGGCTaGGCTGTTGTCATTATCCAG +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTLKEPG*AVVIIQ
Trigger: CTGGATAATGACAACAGCTCAGCCAGGCTCTTTGAG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGTGTGTACACTTTCTaGTTGTTGGCTCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGVYTF*LLALIR
Trigger: CCGGATGAGAGCCAACAATCAGAAAGTGTACACACC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTTTCCCAGGCCCTGTTaGTGTCAGACACTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTFPRPC*CQTLVS
Trigger: GGAAACTAGTGTCTGACATCAACAGGGCCTGGGAAA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCGTCAATCTCATCCTTaGTACCTGCATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNERQSHP*YLHAAA
Trigger: TGCAGCAGCATGCAGGTATCAAGGATGAGATTGACG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTCTGGTTCTTCTTCATaGACAGTTGCACAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNSGSSS*TVAQFA
Trigger: TGCAAACTGTGCAACTGTTCATGAAGAAGAACCAGA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCCTGGTGATACTTCATaGGCAGTTCCACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEPGDTS*AVPQRR
Trigger: TCTCCTCTGTGGAACTGCTCATGAAGTATCACCAGG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTTTCAATCTCTGCATTaGTGCCCTGGTGATACTTCA +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNFQSLH*CPGDTS
Trigger: TGAAGTATCACCAGGGCATCAATGCAGAGATTGAAA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTAGGGTGGTAGATATTTaGCCTCTGTACTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPRVVDI*PLYSCD
Trigger: GTCACATGAGTACAGAGGTCAAATATCTACCACCCT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCTTCCTCCAGAAGTATaGCCTGAGCAGCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHLPPEV*PEQQGE
Trigger: TTCCCCTTGCTGCTCAGGTCATACTTCTGGAGGAAG...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTGTAAGGTGGCTGGTTaGCCACATTTTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPCKVAG*PHFQTL
Trigger: CAGAGTTTGAAAATGTGGGCAACCAGCCACCTTACA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGGCTTCCATCAACTTGTaGTTCTGTAGCAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGASINL*FCSRSS
Trigger: TGAAGACCTGCTACAGAAGCACAAGTTGATGGAAGC...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCACTGGTCAGGTCTTTaGCATAGTCCAGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDHWSGL*HSPGKN
Trigger: ATTCTTCCCTGGACTATGGCAAAGACCTGACCAGTG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCCTCAAAGGCCTTGTaGTTGCGCTGTAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTSSKAL*LRCKMS
Trigger: GCTCATCTTACAGCGCAAGCACAAGGCCTTTGAGGA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTAGGATGGCTTCAGCCTaGTTGGCATCTTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTRMASA*LASFWN
Trigger: GTTCCAGAAAGATGCCAAGCAGGCTGAAGCCATCCT...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGATTGTGAAGGTTTCGTaGTTCATCATAGGAGACATC +
Preference number: 4 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEIVKVS*FIIGDI
Trigger: GATGTCTCCTATGATGAAGCACGAAACCTTCACAAT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGATTGTGAAGGTTTCGTaGTTCATCATAGGAGACATC +
Preference number: 4 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVIVKVS*FIIGDI
Trigger: GATGTCTCCTATGATGAAGCACGAAACCTTCACAAT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTTTTCTGAAATCCACTaGTCCAGGTCGTCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTFSEIH*SRSSVS
Trigger: GGAGACCGACGACCTGGAGCAGTGGATTTCAGAAAA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGCCTGGTGCTGCCGCTaGAGCAGGGACTCGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFAWCCR*SRDSPS
Trigger: GCTTGGCGAGTCCCTGCTGCAGCGGCAGCACCAGGC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATACCCGAAGCAAGACTTaGTTTAGGAACGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHTRSKT*FRNGQR
Trigger: ACGCTGCCCGTTCCTAAAGCAAGTCTTGCTTCGGGT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAATGTTTGCCACCATCTaGCCTTCAGCAAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTMFATI*PSARNL
Trigger: CAGGTTCCTTGCTGAAGGGCAGATGGTGGCAAACAT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTATGTTTGCCACCATCTaGCCTTCAGCAAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSMFATI*PSARNL
Trigger: CAGGTTCCTTGCTGAAGGGCAGATGGTGGCAAACAT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAGTTGAGGGAGATGTTTaGCACCATCTGCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRVEGDV*HHLPFS
Trigger: GCTGAAGGGCAGATGGTGGCAAACATCTCCCTCAAC...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACGTTGCTTGCTGGAAATaGCTCACTTCAGGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDVACWK*LTSGAD
Trigger: ATCAGCACCTGAAGTGAGGCATTTCCAGCAAGCAAC...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCCAAAGCTGGATGCCTaGATTTTCAGTCTAGTTGGT +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPPKLDA*IFSLVG
Trigger: ACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCCAGGGCCAGGTTCTTaGCATCCTTGTAGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEPGPGS*HPCRRL
Trigger: TAACCTTCTACAAGGATGCCAAGAACCTGGCCCTGG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATACATTCTCCAGGCAGTaGATGCGCATCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHTFSRQ*MRIFPL
Trigger: CAAGGGGAAGATGCGCATCCACTGCCTGGAGAATGT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACTTTGTCCCCTTGGATaGCGATGTCAGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTLCPLG*RCQLPS
Trigger: TGATGGAAGCTGACATCGCCATCCAAGGGGACAAAG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGCATCGCCCTGGAACTaGAAAAAGTTCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTASPWN*KKFSAS
Trigger: GGATGCTGAGAACTTTTTCCAGTTCCAGGGCGATGC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGTGTTCAGATGGTCCTaGTACTGCTTCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHVFRWS*YCFTSL
Trigger: CAGGGAGGTGAAGCAGTACCAGGACCATCTGAACAC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGAAATGCCTGCCACCTaGTGTTCAGATGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHEMPAT*CSDGPG
Trigger: ACCAGGACCATCTGAACACCAGGTGGCAGGCATTTC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGCCAGAGTGTATTCCTaGTTGCTGAGGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEARVYS*LLRMAS
Trigger: TGAAGCCATCCTCAGCAACCAGGAATACACTCTGGC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATAGGGCTTCCAGCTTTTaGGACACCAGGGCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHRASSF*DTRAVN
Trigger: GTTTACAGCCCTGGTGTCCCAAAAGCTGGAAGCCCT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTCTGCAGCTTGGCTCTaGATGATTCCAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTSAAWL*MIPAAS
Trigger: AGAAGCAGCTGGAATCATCCAGAGCCAAGCTGCAGA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAGTCTCCCGCTTGAGCTaGAACAGGTGGTACATGTTC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRVSRLS*NRWYMF
Trigger: GAACATGTACCACCTGTTCCAGCTCAAGCGGGAGAC...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAAGGCTCCCTAAAGACTaGCCCAGGGAAACAGTTGAG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRRLPKD*PRETVE
Trigger: CTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTAGTTCACCCATTTCGTaGAGGTCTTTTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDISSPIS*RSFSEQ
Trigger: TTGTTCAGAAAAAGACCTTCACGAAATGGGTGAACT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTCTGGTTCTTCTTCATaGACAGTTGCACAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: STRALPFSGLWSCLLEMPSGSSS*TVAQFA
Trigger: TGCAAACTGTGCAACTGTTCATGAAGAAGAACCAGA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATGCATTGATGCCCTGGTaGTACTTCATGAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHALMPW*YFMSSS
Trigger: GGAACTGCTCATGAAGTATCACCAGGGCATCAATGC...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCAGACAGGATGCAATTaGGCATTTGGCTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEQTGCN*AFGFGM
Trigger: CATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACAGACAGGATGCAATTaGGCATTTGGCTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTQTGCN*AFGFGM
Trigger: CATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTGCTCTAGCTTCTCCTaGCGAATGAGCTCATTTCTC +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSCSSFS*RMSSFL
Trigger: GAGAAATGAGCTCATTCGGCAGGAGAAGCTAGAGCA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATCCTCAAAGGCCTTGTaGTTGCGCTGTAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSSKAL*LRCKMS
Trigger: GCTCATCTTACAGCGCAAGCACAAGGCCTTTGAGGA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCTGTCCTCAATCAGCTaGACCTTCTCCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVELSSIS*TFSLIL
Trigger: CAAGATCAAGGAGAAGGTGCAGCTGATTGAGGACAG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCTCCAAAGTCCCAGCTaGAGACAGGATGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHLQSPS*RQDAIE
Trigger: CTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAG...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACATCAACTTTACTGTCTaGCCAGCCATTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDINFTV*PAITLQ
Trigger: TTGGAGGGTAATGGCTGGGCAGACAGTAAAGTTGAT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCATTTGTCCCAGTTGTaGAGGAGTAGCTGTCACATG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEHLSQL*RSSCHM
Trigger: CATGTGACAGCTACTCCTGCACAACTGGGACAAATG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGGACATGCCTGCAAGTaGACCAAAGGCCTACTTTAT +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEGHACK*TKGLLY
Trigger: ATAAAGTAGGCCTTTGGTGCACTTGCAGGCATGTCC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAAGATTGCATGGTCTGTaGCCAACAGGGTTGCATTCC +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRRLHGL*PTGLHS
Trigger: GGAATGCAACCCTGTTGGGCACAGACCATGCAATCT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTACACTTTCTGATTGTTaGCTCTCATCCGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSTLSDC*LSSGTG
Trigger: TCCAGTCCCGGATGAGAGCCAACAATCAGAAAGTGT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTCTGCAGTGCCAGGGTaGTCTCGAGCCTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFSAVPG*SRASGA
Trigger: GGCGCCAGAGGCTCGAGACCACCCTGGCACTGCAGA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTCATCCGCATCGCCCTaGAACTGGAAAAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTSSASP*NWKKFS
Trigger: TGAGAACTTTTTCCAGTTCCAGGGCGATGCGGATGA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCAGAGAGCAGCCGGTaGGCGTCTTGCAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFPESSR*ASCSQA
Trigger: GGCTTGGCTGCAAGACGCCCACCGGCTGCTCTCTGG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGGAGTAGCTGTCACATaGGTGGTGATACCAAGACAT +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEGVAVT*VVIPRH
Trigger: ATGTCTTGGTATCACCACCCATGTGACAGCTACTCC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGTCACCTCACTGCCTTaGTTTCCCCAGATACAGAAA +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEVTSLP*FPQIQK
Trigger: TTTCTGTATCTGGGGAAACCAAGGCAGTGAGGTGAC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGTCACCTCACTGCCTTaGTTTCCCCAGATACAGAAA +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTVTSLP*FPQIQK
Trigger: TTTCTGTATCTGGGGAAACCAAGGCAGTGAGGTGAC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTTTAGCCATTTATTGTaGAGGTTTCGTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: VSSALWGGVEEASTLMKNFSHLL*RFRASS
Trigger: TGATGAAGCACGAAACCTTCACAATAAATGGCTAAA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTTTTAGCCATTTATTGTaGAGGTTTCGTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIFSHLL*RFRASS
Trigger: TGATGAAGCACGAAACCTTCACAATAAATGGCTAAA...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACTCTGGTTCTTCTTCATaGACAGTTGCACAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: FRSEPCALATVFNEEWSDSGSSS*TVAQFA
Trigger: TGCAAACTGTGCAACTGTTCATGAAGAAGAACCAGA...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGGCTGGCCAGCTGCTTaGTGTTCCGGCCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFGWPAA*CSGRSP
Trigger: AGGACTACGGCCGGAACATCAAGCAGCTGGCCAGCC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGGGAATCCCTGGGCCTaGTGCTCCAGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFGNPWA*CSRCSI
Trigger: GATGGAGCACCTGGAGCAGCAGGCCCAGGGATTCCC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCGGATCCCAGCCTCTaGAGCTTCCAGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFPDPSL*SFQGVW
Trigger: CCAGACTCCCTGGAAGCTGCAGAGGCTGGGATCCGG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATTCTCATCCATCAGCTaGTTTCCTTCCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRFSSIS*FPSASM
Trigger: CATCGATGCGGAAGGAAAGCAGCTGATGGATGAGAA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTTCTCATCCATCAGCTaGTTTCCTTCCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHFSSIS*FPSASM
Trigger: CATCGATGCGGAAGGAAAGCAGCTGATGGATGAGAA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCCAAAGCTGGATGCCTaGATTTTCAGTCTAGTTGGT +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEPKLDA*IFSLVG
Trigger: ACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGCTCTCATCCGGGACTaGATGGTAAAAAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEALIRD*MVKSRT
Trigger: AGTTCTACTTTTTACCATCCAGTCCCGGATGAGAGC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTCTGCCACAAACGCCTaGTGCTTTAGCCATTTATTG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSATNA*CFSHLL
Trigger: CAATAAATGGCTAAAGCACCAGGCGTTTGTGGCAGA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTATCTCCTCTGAGGCCTaGTGCTGCCGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFISSEA*CCRCSR
Trigger: CCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGAGAT...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTCGGTGGCCGCATGGTaGGAAACTGGAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFSVAAW*ETGASP
Trigger: AGGGGAGGCTCCAGTTTCCCACCATGCGGCCACCGA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGTTTTCAATGAGGAATaGTCTGACCTTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTVFNEE*SDLAAL
Trigger: AAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAAC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGCTTTCGGAGTAGAGTaGTGGGGAAAATATGGAATG +
Preference number: 4 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEAFGVE*WGKYGM
Trigger: CATTCCATATTTTCCCCACCACTCTACTCCGAAAGC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGCTTTCGGAGTAGAGTaGTGGGGAAAATATGGAATG +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTAFGVE*WGKYGM
Trigger: CATTCCATATTTTCCCCACCACTCTACTCCGAAAGC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTCCGACACCAGGGTCTaGAATGCCTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFSDTRV*NACHLV
Trigger: CACCAGGTGGCAGGCATTTCAGACCCTGGTGTCGGA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTTTAGCCATTTATTGTaGAGGTTTCGTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGFSHLL*RFRASS
Trigger: TGATGAAGCACGAAACCTTCACAATAAATGGCTAAA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTAACGAGACCAGAGACTaGCCGGGGACGTTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFNETRD*PGTFSR
Trigger: CCGAGAGAACGTCCCCGGTCAGTCTCTGGTCTCGTT...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATATCAACTTTACTGTCTaGCCAGCCATTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHINFTV*PAITLQ
Trigger: TTGGAGGGTAATGGCTGGGCAGACAGTAAAGTTGAT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCGGTCCTGGATGACCTaGGGGTCACAAGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFRSWMT*GSQGWY
Trigger: GTACCAGCCTTGTGACCCCCAGGTCATCCAGGACCG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGAGTCCATCAGCTGCTaGGACTCACGCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFESISC*DSRSRA
Trigger: TGCCCTGGAGCGTGAGTCCCAGCAGCTGATGGACTC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTGGAACTGCTGCACCTaGACACCCAGCAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFWNCCT*TPSRWS
Trigger: GCTCCACCTGCTGGGTGTCCAGGTGCAGCAGTTCCA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAATTGTGAAGGTTTCGTaGTTCATCATAGGAGACATC +
Preference number: 4 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTIVKVS*FIIGDI
Trigger: GATGTCTCCTATGATGAAGCACGAAACCTTCACAAT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTAGGCCCAGTCTCCTCTaGGGGTCTCTCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFRPSLL*GSLCNL
Trigger: CAGATTGCAGAGAGACCCGCAGAGGAGACTGGGCCT...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTCATTCTGCAGTGTCTaGTTCTTCTTCATGAACAGT +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSSFCSV*FFFMNS
Trigger: ACTGTTCATGAAGAAGAACCAGACACTGCAGAATGA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CCA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGAGAAAAACTAGTAAATaGGTTTCCTCTGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVERKTSK*VSSGWW
Trigger: CCACCAACCAGAGGAAACCCATTTACTAGTTTTTCT...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCTCAGCCACATTGAATaGGTGCTCCAGGTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFLSHIE*VLQVVP
Trigger: CGGCACAACCTGGAGCACGCATTCAATGTGGCTGAG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTAGGACAGTGATGGTCTaGTCGATCCAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFRTVMV*SIQVSR
Trigger: CCTGCTCACCTGGATCGAGCAGACCATCACTGTCCT...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGCCCAGCTGCCATGTTaGTCAGCTCCTCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFAQLPC*SAPQST
Trigger: AGTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTAAGTCATCCAGATCCTaGAGGAAGGCCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFKSSRS*RKACSW
Trigger: CCAGCTGCAGGCCTTCCTGCAGGATCTGGATGACTT...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTTTCTTCATGAACAGTTaGACAGTTTGCAGATTAGTG +
Preference number: 4 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSFFMNS*TVCRLV
Trigger: CACTAATCTGCAAACTGTGCAACTGTTCATGAAGAA...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCTCCTGGACATCACCTaGTGCAGTTTCTCGCGGATC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFLLDIT*CSFSRI
Trigger: GATCCGCGAGAAACTGCAGCAGGTGATGTCCAGGAG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTATGGAGAGCCAGGCCTaGAAGTCATCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFMESQA*KSSRSC
Trigger: GCAGGATCTGGATGACTTCCAGGCCTGGCTCTCCAT...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTCATTCTGCAGTGTCTaGTTCTTCTTCATGAACAGT +
Preference number: 4 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHSFCSV*FFFMNS
Trigger: ACTGTTCATGAAGAAGAACCAGACACTGCAGAATGA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR TCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCAGCTTGGCTCTGGATaGTTCCAGCTGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFQLGSG*FQLLLP
Trigger: AGGAAGAAGCAGCTGGAATCATCCAGAGCCAAGCTG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCTCTGCGGGTCTCTCTaGAATCTGGCGTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFLCGSL*NLAFFQ
Trigger: CTGAAAGAACGCCAGATTGCAGAGAGACCCGCAGAG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGTGTTCAGATGGTCCTaGTACTGCTTCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFVFRWS*YCFTSL
Trigger: CAGGGAGGTGAAGCAGTACCAGGACCATCTGAACAC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTCAACCTCCAACAAGTaGTTCCCAAACTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFSTSNK*FPNSAD
Trigger: GTCTGCCGAGTTTGGGAAGCACTTGTTGGAGGTTGA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGATCCTGCTGTAAGGTaGCTGGTTGCCCACATTTTC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFDPAVR*LVAHIF
Trigger: GAAAATGTGGGCAACCAGCCACCTTACAGCAGGATC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTTCACTTTGTCCCCTTaGATGGCGATGTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFFTLSP*MAMSAS
Trigger: GGAAGCTGACATCGCCATCCAAGGGGACAAAGTGAA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTCTCTACCAAGCTGTTaGCAGCGAGGTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFSLPSC*QRGSHH
Trigger: ATGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGCCAGAGTGTATTCCTaGTTGCTGAGGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFARVYS*LLRMAS
Trigger: TGAAGCCATCCTCAGCAACCAGGAATACACTCTGGC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTCTGCAGCTTGGCTCTaGATGATTCCAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFSAAWL*MIPAAS
Trigger: AGAAGCAGCTGGAATCATCCAGAGCCAAGCTGCAGA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR TCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGCTGCACCTTCTCCTTaGTCTTGTCTGAGTATAGGT +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFAAPSP*SCLSIG
Trigger: ACCTATACTCAGACAAGATCAAGGAGAAGGTGCAGC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTTCTCATCCATCAGCTaGTTTCCTTCCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFFSSIS*FPSASM
Trigger: CATCGATGCGGAAGGAAAGCAGCTGATGGATGAGAA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTCATCCGCATCGCCCTaGAACTGGAAAAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFSSASP*NWKKFS
Trigger: TGAGAACTTTTTCCAGTTCCAGGGCGATGCGGATGA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR GCA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTGTAAGGTGGCTGGTTaGCCACATTTTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFCKVAG*PHFQTL
Trigger: CAGAGTTTGAAAATGTGGGCAACCAGCCACCTTACA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGCGGGGCCGGCAGCGTaGCGGGCTCATCACCCTCGC +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGAGPAA*RAHHPR
Trigger: GCGAGGGTGATGAGCCCGCAACGCTGCCGGCCCCGC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGGCAGGCTCTGCGCCTaGACGCGGATGCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRGRLCA*TRMLWD
Trigger: GTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCTGCC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGGGCGAAGGCAGCTTTaGCAGTGCAGCGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAGRRQL*QCSVGP
Trigger: GGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGACCTTGCCGACACGCTaGCCCTCCACTGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRTLPTR*PSTAST
Trigger: GGTGCTGGCAGTGGAGGGCAAGCGTGTCGGCAAGGT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGCGGGGCCGGCAGCGTaGCGGGCTCATCACCCTCGC +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKAGPAA*RAHHPR
Trigger: GCGAGGGTGATGAGCCCGCAACGCTGCCGGCCCCGC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCTCGCCTTCCTCCTCTaGAGGCCCAGTCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAALAFLL*RPSLLC
Trigger: GCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGAG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGAATGCGTGCTCCAGGTaGTGCCGGGCATTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRNACSR*CRALES
Trigger: GGACTCCAATGCCCGGCACAACCTGGAGCACGCATT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCTGGGCCACCACCTGTaGGTAGAGCTCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREELGHHL*VELPQG
Trigger: GCCCTGCGGGAGCTCTACCAACAGGTGGTGGCCCAG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGTCGTCGGTCTCCCGCTaGAGCTGGAACAGGTGGTAC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAASSVSR*SWNRWY
Trigger: GTACCACCTGTTCCAGCTCAAGCGGGAGACCGACGA...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTTGGAAGCCTTCTTGTaGGGCCCCTCCAGGTCATGC +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRLEAFL*GPSRSC
Trigger: GCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCAA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGTCCTCCAGGAAGTCCTaGTGCTTTTTCCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAASSRKS*CFFPRA
Trigger: GGCCCTGGGGAAAAAGCACAAGGACTTCCTGGAGGA...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTGGGTCCGTCTGGCCTaGGATCACTTTCTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRWVRLA*DHFLPR
Trigger: TCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTCCTGGGCCTTCTCGTaGTTCTTCCTGTGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRSWAFS*FFLCLS
Trigger: GGACAGGCACAGGAAGAACAACGAGAAGGCCCAGGA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGCGCTGATCCACTTGTaGAGGTCAGCATGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRALIHL*RSAWVC
Trigger: GCAGACCCATGCTGACCTCAACAAGTGGATCAGCGC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGCAAAGTCCCGGAACTaGTCCCGCAGAAGAGTCACG +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRAKSRN*SRRRVT
Trigger: CGTGACTCTTCTGCGGGACAAGTTCCGGGACTTTGC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp TGCACCTGGACACCCAGCAGGTGGAGCTCCCGCTCGAAGGCTGTGTaGACCCGGTGGAAGGACTCGGCCGTGCTGGCGTCCAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: CTWTPSRWSSRSKAV*TRWKDSAVLASSPT
Trigger: CGTGGGGCTGGACGCCAGCACGGCCGAGTCCTTCCACCGGGTGCACACAGCCTTCGAGCGGGAGCTCCACCTGCTGGGTGTCCAGGTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGATCTCCTCCTCATCCTaGCCATGGAAGAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRISSSS*PWKSHS
Trigger: CGAGTGGCTCTTCCATGGCAAGGATGAGGAGGAGAT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTGTACACGCTGCTCCTaGAGGAACTGGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRCTRCS*RNWRAL
Trigger: CAAGGCTCTCCAGTTCCTCAAGGAGCAGCGTGTACA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCTCATGCTTCTTCTaGGCGGCCTCCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREEASCFF*AASTAA
Trigger: GGCAGCTGTGGAGGCCGCCAAGAAGAAGCATGAGGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGGTCAGCAGCTTGTCGTaGATCCAGAGAGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAVSSLS*IQRVSS
Trigger: GGAGCTCACTCTCTGGATCAACGACAAGCTGCTGAC...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGATGGCGCTGATCCACTaGTTGAGGTCAGCATGGGTC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAMALIH*LRSAWV
Trigger: GACCCATGCTGACCTCAACAAGTGGATCAGCGCCAT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTTCTCCAGCTTGCGCTaGCGCTCTTCCGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREEFSSLR*RSSATS
Trigger: GGACGTGGCGGAAGAGCGCAAGCGCAAGCTGGAGAA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGATGAAGGCATTCACATaGTCCACCCGCTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRMKAFT*STRSCP
Trigger: TGGGCAGGAGCGGGTGGACAATGTGAATGCCTTCAT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGGGCGAAGGCAGCTTTaGCAGTGCAGCGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKGRRQL*QCSVGP
Trigger: GGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGGAACGGGCAGCGTTaGAAGAACCCCATCAGCCTT +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAARNGQR*KNPISL
Trigger: AAGGCTGATGGGGTTCTTCAAACGCTGCCCGTTCCT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGCGAGGGTCCCAGCATaGAGAGGGAGAGCCTTAGGC +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGARVPA*RGRALG
Trigger: GCCTAAGGCTCTCCCTCTCAATGCTGGGACCCTCGC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGGCAGGCTCTGCGCCTaGACGCGGATGCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRGRLCA*TRMLWD
Trigger: GTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCTGCC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGGCAGGCTCTGCGCCTaGACGCGGATGCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGGRLCA*TRMLWD
Trigger: GTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCTGCC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTTCTCCTTGTCTTTCTaGCCGAGGCTGGCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGFSLSF*PRLASG
Trigger: CCCCGACGCCAGCCTCGGCAAGAAAGACAAGGAGAA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGATCTGCTCCTTCTCCTaGATCCAGCTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRICSFS*IQLSAS
Trigger: TGAGGCTGAGAGCTGGATCAAGGAGAAGGAGCAGAT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCAGCCGGTGGGCGTCTaGCAGCCAAGCCTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLQPVGV*QPSLQV
Trigger: GACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCTG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCAGCCGGTGGGCGTCTaGCAGCCAAGCCTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKQPVGV*QPSLQV
Trigger: GACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCTG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGATGGCTTCAGCCTGCTaGGCATCTTTCTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAAMASAC*ASFWNS
Trigger: GGAGTTCCAGAAAGATGCCAAGCAGGCTGAAGCCAT...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGGCTGGGTCTTCTCCTTaGTGGTGGCCTGCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGAGSSP*WWPAAR
Trigger: ACGAGCTGCAGGCCACCACAAAGGAGAAGACCCAGC...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGACACTGGTCAGGTCCTaGCCCGGGTCGTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVTLVRS*PGSSDR
Trigger: GCGGTCAGACGACCCGGGCAAGGACCTGACCAGTGT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGGGGGAGGGTGGGCCCTaGTCCCTAGGCTCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKGEGGP*SLGSLK
Trigger: CTTTAGGGAGCCTAGGGACAAGGGCCCACCCTCCCC...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp CGCTCCTCAAGGTCCTGGCAGTCGATCTCCGCCGCCTCCACCAGCTaGTGCCCTCTCTGCAGCACATCCTCAACCCGCGGCGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: RSSRSWQSISAASTS*CPLCSTSSTRGVWP
Trigger: GGGCCATACGCCGCGGGTTGAGGATGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGCGGCGGAGATCGACTGCCAGGACCTTGAGGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp TCCACTAGCTGGGTCCGGCGCCCGGCACAGGCATCGAGCAGCGCCTaGCACGCGGCAGACACCTCCTGCTCCTTGTTCTGGATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: STSWVRRPAQASSSA*HAADTSCSLFWMAS
Trigger: AGAGGCCATCCAGAACAAGGAGCAGGAGGTGTCTGCCGCGTGGCAGGCGCTGCTCGATGCCTGTGCCGGGCGCCGGACCCAGCTAGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTTGGAAGCCTTCTTGTaGGGCCCCTCCAGGTCATGC +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREELEAFL*GPSRSC
Trigger: GCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCAA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCTGTTGGAAGCCTTCTaGTTGGGCCCCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLLEAF*LGPSRS
Trigger: TGACCTGGAGGGGCCCAACAAGAAGGCTTCCAACAG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGATGCTCTGGGACTCGTaGATGGCGGTGCTCACGCCC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVMLWDS*MAVLTP
Trigger: GGGCGTGAGCACCGCCATCAACGAGTCCCAGAGCAT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGATGCGCATCTTCCCCTaGGTGGGCTTTGGCAGCATC +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGMRIFP*VGFGSI
Trigger: GATGCTGCCAAAGCCCACCAAGGGGAAGATGCGCAT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCATGGTCAATAACCTaGCCGACACGCTTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREEAWSIT*PTRLPS
Trigger: GGAGGGCAAGCGTGTCGGCAAGGTTATTGACCATGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTTTGGACTGCTCCAGTaGGGCCTTCCGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVFGLLQ*GLPPSC
Trigger: GCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAAA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTCCTGGGCCTTCTCGTaGTTCTTCCTGTGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGSWAFS*FFLCLS
Trigger: GGACAGGCACAGGAAGAACAACGAGAAGGCCCAGGA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGTTAGCCAACATCCGATaGACACTGGTCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRLANIR*TLVRSL
Trigger: CAAGGACCTGACCAGTGTCAATCGGATGTTGGCTAA...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCTCCCTCCTCTCCCATaGAAGGCACCTGGGCAAACA +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREELPPLP*KAPGQT
Trigger: TGTTTGCCCAGGTGCCTTCAATGGGAGAGGAGGGAG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTACTGCTGTGCCTCGTaGGCGTCCCTCAGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKYCCAS*ASLSRC
Trigger: GCAGCGACTGAGGGACGCCAACGAGGCACAGCAGTA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTACTGCTGTGCCTCGTaGGCGTCCCTCAGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVYCCAS*ASLSRC
Trigger: GCAGCGACTGAGGGACGCCAACGAGGCACAGCAGTA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCGCCCTCTTCATCCTaGGGGATCTCATCGGAGATG +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREEAPSSS*GISSEM
Trigger: CATCTCCGATGAGATCCCCAAGGATGAAGAGGGCGC...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGTACATGTTCTCCAGCTaGCGCTTGCGCTCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGYMFSS*RLRSSA
Trigger: GGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGTA...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCTCGCCTTCCTCCTCTaGAGGCCCAGTCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKLAFLL*RPSLLC
Trigger: GCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGAG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCTCGCCTTCCTCCTCTaGAGGCCCAGTCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVLAFLL*RPSLLC
Trigger: GCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGAG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGAGTCACCTCACTGCCTaGGTTTCCCCAGATACAGAA +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRSHLTA*VSPDTE
Trigger: TTCTGTATCTGGGGAAACCAAGGCAGTGAGGTGACT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCTCCTGTTAGGGGTGTaGGTGGAGGCCAGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVLLLGV*VEARLG
Trigger: CCCCAACCTGGCCTCCACCAACACCCCTAACAGGAG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGATTTCCTCCCTGAGCTaGTTTGTCCAAGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRISSLS*FVQATK
Trigger: CTTGGTGGCTTGGACAAACAAGCTCAGGGAGGAAAT...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGTCTTCTCCCTTACTGTaGGAAGCCTTCTTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAASSPLL*EAFLLG
Trigger: GCCCAACAAGAAGGCTTCCAACAGTAAGGGAGAAGA...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS TCA 90 bp CGTCCAGCCCCACGTCCTCGGGCAGCTCGCGGTGCTTCTCGTCGATaGGGCCCAGGATCTCGGCACCCGTGTAGAAGTAGCGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: RPAPRPRAARGASRR*GPGSRHPCRSSGAG
Trigger: ACCTGCACCGCTACTTCTACACGGGTGCCGAGATCCTGGGCCTCATCGACGAGAAGCACCGCGAGCTGCCCGAGGACGTGGGGCTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGAGCGAGTTGGCAAACTaGCGGCTGTTCAGGACAGTG +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREESELAN*RLFRTV
Trigger: CACTGTCCTGAACAGCCGCAAGTTTGCCAACTCGCT...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGACGCCCGTCAGCGAGTaGGCAAACTTGCGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLTPVSE*ANLRLF
Trigger: GAACAGCCGCAAGTTTGCCAACTCGCTGACGGGCGT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTACTGCTGTGCCTCGTaGGCGTCCCTCAGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRYCCAS*ASLSRC
Trigger: GCAGCGACTGAGGGACGCCAACGAGGCACAGCAGTA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCGTCGGTCTCCCGCTaGAGCTGGAACAGGTGGTAC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSSVSR*SWNRWY
Trigger: GTACCACCTGTTCCAGCTCAAGCGGGAGACCGACGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGATGAAGGCATTCACATaGTCCACCCGCTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGMKAFT*STRSCP
Trigger: TGGGCAGGAGCGGGTGGACAATGTGAATGCCTTCAT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp TCCTCAAGGTCCTGGCAGTCGATCTCCGCCGCCTCCACCAGCTGCTaGCCTCTCTGCAGCACATCCTCAACCCGCGGCGTATGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SSRSWQSISAASTSC*PLCSTSSTRGVWPR
Trigger: TCTGGGCCATACGCCGCGGGTTGAGGATGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGCGGCGGAGATCGACTGCCAGGACCTTGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp GGACGTTCTCTCGGTGGCCGCATGGTGGGAAACTGGAGCCTCCCCTaGTGTCTCGCCTTCCTCCTCTTGAGGCCCAGTCTCCTCTGCGGG +
Preference number: 5 (lower is better)
Translates to: GRSLGGRMVGNWSLP*CLAFLLLRPSLLCG
Trigger: CCCGCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGAGACAGCAGGGGAGGCTCCAGTTTCCCACCATGCGGCCACCGAGAGAACGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 90 bp TCAGCTGCTGGGACTCACGCTCCAGGGCATCCACACGGGCCTGGATaGCGGCCACGTCACGCTCCAGCCCTGACAACTTCCTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: SAAGTHAPGHPHGPG*RPRHAPALTTSSGW
Trigger: CCATCCAGAGGAAGTTGTCAGGGCTGGAGCGTGACGTGGCCGCCATCCAGGCCCGTGTGGATGCCCTGGAGCGTGAGTCCCAGCAGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTTGGAAGCCTTCTTGTaGGGCCCCTCCAGGTCATGC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVLEAFL*GPSRSC
Trigger: GCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCAA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTTCTCCTTGTCTTTCTaGCCGAGGCTGGCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRFSLSF*PRLASG
Trigger: CCCCGACGCCAGCCTCGGCAAGAAAGACAAGGAGAA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTGGCGCTCAGCCACATaGAATGCGTGCTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLWRSAT*NACSRL
Trigger: CAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCAGATTCCCCTTCTCTaGAAACTTGGGCGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREEQIPLL*KLGRLL
Trigger: GAGAAGCCGCCCAAGTTTCAAGAGAAGGGGAATCTG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGCTTCACTTTGTCCCCTaGGATGGCGATGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREELHFVP*DGDVSF
Trigger: GAAGCTGACATCGCCATCCAAGGGGACAAAGTGAAG...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCTTCACTTTGTCCCCTaGGATGGCGATGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGLHFVP*DGDVSF
Trigger: GAAGCTGACATCGCCATCCAAGGGGACAAAGTGAAG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTCCTCCAGGAAGTCCTaGTGCTTTTTCCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLSSRKS*CFFPRA
Trigger: GGCCCTGGGGAAAAAGCACAAGGACTTCCTGGAGGA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGCCGTCAATCTCATCCTaGATACCTGCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGPSISS*IPACCC
Trigger: GCAGCAGCATGCAGGTATCAAGGATGAGATTGACGG...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCTCCCTCCTCTCCCATaGAAGGCACCTGGGCAAACA +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVLPPLP*KAPGQT
Trigger: TGTTTGCCCAGGTGCCTTCAATGGGAGAGGAGGGAG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCGGCTGATCTGCAGCTaGGCTCTGGATGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLRLICS*ALDDSS
Trigger: GCTGGAATCATCCAGAGCCAAGCTGCAGATCAGCCG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCGGCTGATCTGCAGCTaGGCTCTGGATGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKRLICS*ALDDSS
Trigger: GCTGGAATCATCCAGAGCCAAGCTGCAGATCAGCCG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGGGGCCCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGCTGTGTCAACCTCGTTaGGGAATACTGTCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: RGPGPRLDSSRFDRRAAALCQPR*GILSKD
Trigger: GTCTTTTGACAGTATTCCCAAACGAGGTTGACACAG...CGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp CCTCCAAGAGGGGCGGGAGTAGGTTCCAGAGGAGGGGACATGGGCTaGACTGCTGCTCCTGCTACCATCAGTGCTCTCCCTGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: PPRGAGVGSRGGDMG*TAAPATISALPALG
Trigger: CCCAAGGGCAGGGAGAGCACTGATGGTAGCAGGAGCAGCAGTGCAGCCCATGTCCCCTCCTCTGGAACCTACTCCCGCCCCTCTTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 90 bp CGCAGCTGGTCCTCCATGGCGCTGATCCACTTGTTGAGGTCAGCATaGGTCTGCAAGCGCAGGTCGGAGCTCCTGGCAGCCGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RSWSSMALIHLLRSA*VCKRRSELLAAERC
Trigger: GCACCTCTCGGCTGCCAGGAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCTCAACAAGTGGATCAGCGCCATGGAGGACCAGCTGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCATGCGCATCTTCCCCTaGGTGGGCTTTGGCAGCATC +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGMRIFP*VGFGSI
Trigger: GATGCTGCCAAAGCCCACCAAGGGGAAGATGCGCAT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCATAGGCGCAGTATATaGTCCTTGCGGGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVHRRSI*SLRAVM
Trigger: CATCACGGCCCGCAAGGACAATATACTGCGCCTATG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGAACTTCCAGAGTCGTTaGGACTGCTCCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLNFQSR*DCSSWA
Trigger: GGCCCAACTGGAGCAGTCCAAACGACTCTGGAAGTT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCTCTCTACCAAGCTGTaGGCAGCGAGGTTCACACCA +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLSTKL*AARFTP
Trigger: TGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGAG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTGGGTCCGTCTGGCCTaGGATCACTTTCTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRWVRLA*DHFLPR
Trigger: TCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGGGCCCGGGAAGACCTTATCCCGGTaGTTCTCCATAGACCCCAAG +
Preference number: 5 (lower is better)
Translates to: RPRTRGRRQLLQCSVGPGKTLSR*FSIDPK
Trigger: CTTGGGGTCTATGGAGAACAACCGGGATAAGGTCTT...CCCGGGCCCCACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCACACTGGTCAGGTCCTaGCCCGGGTCGTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPTLVRS*PGSSDR
Trigger: GCGGTCAGACGACCCGGGCAAGGACCTGACCAGTGT...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCGGCCCGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGTTTTCGCACATTCACTaGGTCCTCCACTCGCTTCAG +
Preference number: 5 (lower is better)
Translates to: PARDSTHLDSTGGRRREEFSHIH*VLHSLQ
Trigger: CTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAAA...CTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGCGCCCTCTTCATCCTaGGGGATCTCATCGGAGATG +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGAPSSS*GISSEM
Trigger: CATCTCCGATGAGATCCCCAAGGATGAAGAGGGCGC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCACGTGGTCAAAGTCTaGCCCCATTTCCGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKHVVKV*PHFRGR
Trigger: TCTTCCCCGGAAATGGGGCAAGACTTTGACCACGTG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGCAAAGTCCCGGAACTaGTCCCGCAGAAGAGTCACG +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGAKSRN*SRRRVT
Trigger: CGTGACTCTTCTGCGGGACAAGTTCCGGGACTTTGC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGAGGAACGGGCAGCGTTaGAAGAACCCCATCAGCCTT +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKRNGQR*KNPISL
Trigger: AAGGCTGATGGGGTTCTTCAAACGCTGCCCGTTCCT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTTGGATATTGCTGGTTaGGCTGCCACTGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKLDIAG*AATGSG
Trigger: CCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGGATGCAATTGAGCATTaGGCTTTGGGATGCTTTACT +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRDAIEH*ALGCFT
Trigger: AGTAAAGCATCCCAAAGCCAAATGCTCAATTGCATC...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCCACCCCCGACCCGCTaGACTGCTCTCTTGGACCTA +
Preference number: 5 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRPPPTR*TALLDL
Trigger: TAGGTCCAAGAGAGCAGTCAAGCGGGTCGGGGGTGG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGATGGGTTTCCTCTGGTaGGTGGAAGCACGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKMGFLW*VEARLS
Trigger: GCTCAACCGTGCTTCCACCAACCAGAGGAAACCCAT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp CATCCAGTCGATGCTGTGCAGCATGTCCTGGAAGAGCTTCTGCAGTaGCAGGGTGGTCTCGAGCCTCTGGCGCCGGGACTGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: HPVDAVQHVLEELLQ*QGGLEPLAPGLQQL
Trigger: GAGCTGCTGCAGTCCCGGCGCCAGAGGCTCGAGACCACCCTGGCACTGCAGAAGCTCTTCCAGGACATGCTGCACAGCATCGACTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp TGCGGGCCTCGATCTGCGGGTGCCCAAACTGCTTGCGCGCAACCATaGCATGAGCCTCCTGGAAGATCTGCTCCAGGTGAGCATCCAGCC +
Preference number: 5 (lower is better)
Translates to: CGPRSAGAQTACAQP*HEPPGRSAPGEHPA
Trigger: GGCTGGATGCTCACCTGGAGCAGATCTTCCAGGAGGCTCATGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp CAGCCAGGTCCTTCAGCTGGTCCCACTGTGCCGACACCTCCTTTATaGGGGCCTCGATCTGCGGGTGCCCAAACTGCTTGCGCGCAACCA +
Preference number: 5 (lower is better)
Translates to: QPGPSAGPTVPTPPL*GPRSAGAQTACAQP
Trigger: TGGTTGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCATAAAGGAGGTGTCGGCACAGTGGGACCAGCTGAAGGACCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp TGGTCCTCCATGGCGCTGATCCACTTGTTGAGGTCAGCATGGGTCTaGAAGCGCAGGTCGGAGCTCCTGGCAGCCGAGAGGTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: WSSMALIHLLRSAWV*KRRSELLAAERCWV
Trigger: GACCCAGCACCTCTCGGCTGCCAGGAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCTCAACAAGTGGATCAGCGCCATGGAGGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp TCCTGGCAGTCGATCTCCGCCGCCTCCACCAGCTGCTGCCCTCTCTaGAGCACATCCTCAACCCGCGGCGTATGGCCCAGAATCTCATTC +
Preference number: 5 (lower is better)
Translates to: SWQSISAASTSCCPL*STSSTRGVWPRISF
Trigger: GAATGAGATTCTGGGCCATACGCCGCGGGTTGAGGATGTGCTGCAGAGAGGGCAGCAGCTGGTGGAGGCGGCGGAGATCGACTGCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp AGGGGCGGGAGTAGGTTCCAGAGGAGGGGACATGGGCTGCACTGCTaGTCCTGCTACCATCAGTGCTCTCCCTGCCCTTGGGTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RGGSRFQRRGHGLHC*SCYHQCSPCPWVSE
Trigger: CTCTGAGACCCAAGGGCAGGGAGAGCACTGATGGTAGCAGGAGCAGCAGTGCAGCCCATGTCCCCTCCTCTGGAACCTACTCCCGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 90 bp GGCCTCCCATTGCCAGGTGGGGCAAGAATGGGTGGGTCTCCTCCGTaGCAAGTGAGCACCAAGGAAGGCAGCCTCACTGGAGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: GLPLPGGARMGGSPP*QVSTKEGSLTGAIW
Trigger: CCAGATGGCTCCAGTGAGGCTGCCTTCCTTGGTGCTCACTTGGCACGGAGGAGACCCACCCATTCTTGCCCCACCTGGCAATGGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 90 bp ATCCCCAGTGGATTTCTGCCCATCCTTGTGCTGACCCGGCGGTGGTaGCTGCTGCAGGTTCTGAGGCCACGTTCCCTCTTCTTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: IPSGFLPILVLTRRW*LLQVLRPRSLFFPR
Trigger: CCGGGGGAAGAAGAGGGAACGTGGCCTCAGAACCTGCAGCAGCCACCACCGCCGGGTCAGCACAAGGATGGGCAGAAATCCACTGGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGATCTCCTCCTCATCCTaGCCATGGAAGAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRISSSS*PWKSHS
Trigger: CGAGTGGCTCTTCCATGGCAAGGATGAGGAGGAGAT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGAGGTCGGGCCGGTGCTaGTGTATCAGGGCATTAAAG +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRRSGRC*CIRALK
Trigger: CTTTAATGCCCTGATACACAAGCACCGGCCCGACCT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAGCGAGTTGGCAAACTaGCGGCTGTTCAGGACAGTG +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSELAN*RLFRTV
Trigger: CACTGTCCTGAACAGCCGCAAGTTTGCCAACTCGCT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGCCTCATGCTTCTTCTaGGCGGCCTCCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPASCFF*AASTAA
Trigger: GGCAGCTGTGGAGGCCGCCAAGAAGAAGCATGAGGC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGCTTCACTTTGTCCCCTaGGATGGCGATGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLLHFVP*DGDVSF
Trigger: GAAGCTGACATCGCCATCCAAGGGGACAAAGTGAAG...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAACTTCCAGAGTCGTTaGGACTGCTCCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGNFQSR*DCSSWA
Trigger: GGCCCAACTGGAGCAGTCCAAACGACTCTGGAAGTT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGATGGCTTCAGCCTGCTaGGCATCTTTCTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLMASAC*ASFWNS
Trigger: GGAGTTCCAGAAAGATGCCAAGCAGGCTGAAGCCAT...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCTTCTTCATGAACAGTaGCACAGTTTGCAGATTAGT +
Preference number: 5 (lower is better)
Translates to: PARARAWRGRRPRTRGRRLLHEQ*HSLQIS
Trigger: ACTAATCTGCAAACTGTGCAACTGTTCATGAAGAAG...CCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCTCCATGCCCTCGCCCGCGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGGAAGGTGATAGAAACTaGACTGCAGGCCCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWREGDRN*TAGPGD
Trigger: GTCCCCAGGGCCTGCAGTCAAGTTTCTATCACCTTC...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCACTTCAGGTGCTGATTaGGCACACGTGGAAGGGGGA +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGTSGAD*AHVEGG
Trigger: TCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAGT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp GCTGGTCTCCTCGCAATCTACGCAGTAGTTGTGCACTCGGAGGGCTaGGTCCACAGCCTCCCGCCGCTCCGACACCAGGGTCTGAAATGC +
Preference number: 5 (lower is better)
Translates to: AGLLAIYAVVVHSEG*VHSLPPLRHQGLKC
Trigger: GCATTTCAGACCCTGGTGTCGGAGCGGCGGGAGGCTGTGGACTCAGCCCTCCGAGTGCACAACTACTGCGTAGATTGCGAGGAGACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp TGCTGCAGTTTCTCGCGGATCTCCTCTGAGGCCTGGTGCTGCCGCTaGAGCAGGGACTCGCCAAGCTCCAGGCAGGCACTGAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: CCSFSRISSEAWCCR*SRDSPSSRQALKFL
Trigger: CAAGAACTTCAGTGCCTGCCTGGAGCTTGGCGAGTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGAGATCCGCGAGAAACTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp AAGAGGGGCGGGAGTAGGTTCCAGAGGAGGGGACATGGGCTGCACTaGTGCTCCTGCTACCATCAGTGCTCTCCCTGCCCTTGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: KRGGSRFQRRGHGLH*CSCYHQCSPCPWVS
Trigger: TGAGACCCAAGGGCAGGGAGAGCACTGATGGTAGCAGGAGCAGCAGTGCAGCCCATGTCCCCTCCTCTGGAACCTACTCCCGCCCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 90 bp ATCCCCAGTGGATTTCTGCCCATCCTTGTGCTGACCCGGCGGTGGTaGCTGCTGCAGGTTCTGAGGCCACGTTCCCTCTTCTTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: IPSGFLPILVLTRRW*LLQVLRPRSLFFPL
Trigger: CAGGGGGAAGAAGAGGGAACGTGGCCTCAGAACCTGCAGCAGCCACCACCGCCGGGTCAGCACAAGGATGGGCAGAAATCCACTGGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342835.9
ENST00000556227.1
CDS-3UTR CAA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCTGTTGGAAGCCTTCTaGTTGGGCCCCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRLLEAF*LGPSRS
Trigger: TGACCTGGAGGGGCCCAACAAGAAGGCTTCCAACAG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGTGGCGCTCAGCCACATaGAATGCGTGCTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRWRSAT*NACSRL
Trigger: CAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCA...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGCTTTCCCAGGCCCTGTaGATGTCAGACACTAGTTTC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVLSQAL*MSDTSF
Trigger: GAAACTAGTGTCTGACATCAACAGGGCCTGGGAAAG...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGCCAGGTCTCTCTCATaGCGGCCTTCCGGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPARSLS*RPSGQS
Trigger: GCTTTGACCGGAAGGCCGCAATGAGAGAGACCTGGC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTCAAAGGCCTTGTGCTaGCGCTGTAAGATGAGCACA +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSKALC*RCKMST
Trigger: TGTGCTCATCTTACAGCGCAAGCACAAGGCCTTTGA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGTCATCCTCAAAGGCCTaGTGCTTGCGCTGTAAGATG +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVSSSKA*CLRCKM
Trigger: CATCTTACAGCGCAAGCACAAGGCCTTTGAGGATGA...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCCGTCAATCTCATCCTaGATACCTGCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGPSISS*IPACCC
Trigger: GCAGCAGCATGCAGGTATCAAGGATGAGATTGACGG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGAAGACCTTATCCCGGTaGTTCTCCATAGACCCCAAG +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKKTLSR*FSIDPK
Trigger: CTTGGGGTCTATGGAGAACAACCGGGATAAGGTCTT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGTTAGCCAACATCCGATaGACACTGGTCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKLANIR*TLVRSL
Trigger: CAAGGACCTGACCAGTGTCAATCGGATGTTGGCTAA...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GGATGTGGGGAGGATGGAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTGTTTTCGCACATTCACTaGGTCCTCCACTCGCTTCAG +
Preference number: 5 (lower is better)
Translates to: GCGEDGGRGCASSSRLHLFSHIH*VLHSLQ
Trigger: CTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAAA...CAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTCCATCCTCCCCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGGCGCCCTCTTCATCCTaGGGGATCTCATCGGAGATG +
Preference number: 5 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRAPSSS*GISSEM
Trigger: CATCTCCGATGAGATCCCCAAGGATGAAGAGGGCGC...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGCAGGCACTGAAGTTCTaGCTCCGGGTTTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKQALKF*LRVSIS
Trigger: AGAGATTGAAACCCGGAGCAAGAACTTCAGTGCCTG...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGACTTTCATGGTTTCCTaGGGGGAAAATGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVTFMVS*GENACC
Trigger: GCAGCAGGCATTTTCCCCCAAGGAAACCATGAAAGT...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCGGTCTGTGGAGTTGCTaGCTGGAAATGCCTCACTTC +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGGLWSC*LEMPHF
Trigger: GAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACC...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCAGGGCCAGCCCCAGATaGCATGGTCTGTGCCCAACA +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPRASPR*HGLCPT
Trigger: TGTTGGGCACAGACCATGCAATCTGGGGCTGGCCCT...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCAGCACACAGTACAGGTaGTTCCAGGACACGTGGGAA +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGSTQYR*FQDTWE
Trigger: TTCCCACGTGTCCTGGAACAACCTGTACTGTGTGCT...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS TCA 90 bp CGGCCACGTCACGCTCCAGCCCTGACAACTTCCTCTGGATGGCGATaGTACCTGCCAGGTCCCGCCCCAGGTCTTTTGTGGACTCCACTA +
Preference number: 5 (lower is better)
Translates to: RPRHAPALTTSSGWR*YLPGPAPGLLWTPL
Trigger: TAGTGGAGTCCACAAAAGACCTGGGGCGGGACCTGGCAGGTATCATCGCCATCCAGAGGAAGTTGTCAGGGCTGGAGCGTGACGTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp CCACCTGGGCTGAGCCTAGTAGGGGTGAGAGGGCTCTGGCTGCAGTaGCTCCCAGGAACTAGACAAACGAGACCAGAGACTGACCGGGGA +
Preference number: 5 (lower is better)
Translates to: PPGLSLVGVRGLWLQ*LPGTRQTRPETDRG
Trigger: TCCCCGGTCAGTCTCTGGTCTCGTTTGTCTAGTTCCTGGGAGTCACTGCAGCCAGAGCCCTCTCACCCCTACTAGGCTCAGCCCAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS GCA 90 bp AGGACCTGTTGGAAGCCTTCTTGTTGGGCCCCTCCAGGTCATGCTTaGGGCCCAGGTAGCCTTCCATCTGCACACTCTGCCCATGGTCCC +
Preference number: 5 (lower is better)
Translates to: RTCWKPSCWAPPGHA*GPGSLPSAHSAHGP
Trigger: GGGACCATGGGCAGAGTGTGCAGATGGAAGGCTACCTGGGCCGCAAGCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCAACAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342835.9
ENST00000389722.7
ENST00000556227.1
ENST00000644917.1
CDS GCA 90 bp TTGACGCGGATGCTCTGGGACTCGTTGATGGCGGTGCTCACGCCCTaGAGCCAGGACAGCATCTCCTCCTCATCCTTGCCATGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LTRMLWDSLMAVLTP*SQDSISSSSLPWKS
Trigger: GCTCTTCCATGGCAAGGATGAGGAGGAGATGCTGTCCTGGCTGCAGGGCGTGAGCACCGCCATCAACGAGTCCCAGAGCATCCGCGTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342835.9
ENST00000389722.7
ENST00000553938.5
ENST00000556227.1
ENST00000644917.1
CDS GCA 90 bp TCGTCCTGCCCCACATCTTCACCAGAGAGCAGCCGGTGGGCGTCTTaGAGCCAAGCCTTCAGGTCATCCGCATCGCCCTGGAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: SSCPTSSPESSRWAS*SQAFRSSASPWNWK
Trigger: TTTCCAGTTCCAGGGCGATGCGGATGACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCTGCTCTCTGGTGAAGATGTGGGGCAGGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp CCTGCCACCTGGTGTTCAGATGGTCCTGGTACTGCTTCACCTCCCTaGTGCGTGGGTGGCCACTCTCTACCAAGCTGTTGGCAGCGAGGT +
Preference number: 5 (lower is better)
Translates to: PATWCSDGPGTASPP*CVGGHSLPSCWQRG
Trigger: ACCTCGCTGCCAACAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCTGAACACCAGGTGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp TCGATGAGTCGCTCGATGAAGGCATTCACATTGTCCACCCGCTCCTaGCCAATCGCCCCGGTCTCCCGGGCAAAGTCCCGGAACTTGTCC +
Preference number: 5 (lower is better)
Translates to: SMSRSMKAFTLSTRS*PIAPVSRAKSRNLS
Trigger: GGACAAGTTCCGGGACTTTGCCCGGGAGACCGGGGCGATTGGGCAGGAGCGGGTGGACAATGTGAATGCCTTCATCGAGCGACTCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp GGGAGTAGGTTCCAGAGGAGGGGACATGGGCTGCACTGCTGCTCCTaGTACCATCAGTGCTCTCCCTGCCCTTGGGTCTCAGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GSRFQRRGHGLHCCS*YHQCSPCPWVSEKQ
Trigger: CTGCTTCTCTGAGACCCAAGGGCAGGGAGAGCACTGATGGTAGCAGGAGCAGCAGTGCAGCCCATGTCCCCTCCTCTGGAACCTACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 90 bp CCTGGCCCACCCTGGCTCTCCCACAACCTGCTATGGGTGCCCCCTTaGTTCTCTACTCTGCCTGTGCTTCTGGCTCCATTTCCACCCCAT +
Preference number: 5 (lower is better)
Translates to: PGPPWLSHNLLWVPP*FSTLPVLLAPFPPH
Trigger: ATGGGGTGGAAATGGAGCCAGAAGCACAGGCAGAGTAGAGAAGCAAGGGGGCACCCATAGCAGGTTGTGGGAGAGCCAGGGTGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 90 bp TCCGTAAAGACATCTTCGGGGTCGAGGAGCGGGATGATGCCCAGCTaGCGCTCAGCCACATTGAATGCGTGCTCCAGGTTGTGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: SVKTSSGSRSGMMPS*RSATLNACSRLCRA
Trigger: TGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCCGCTCCTCGACCCCGAAGATGTCTTTACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCTGAATCTCTTCTCCTaGTCTTTCTTGCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGLNLFS*SFLPRL
Trigger: CAGCCTCGGCAAGAAAGACAAGGAGAAGAGATTCAG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGACCTTGCCGACACGCTaGCCCTCCACTGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVTLPTR*PSTAST
Trigger: GGTGCTGGCAGTGGAGGGCAAGCGTGTCGGCAAGGT...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCCTGGAGGTTCTTCTaGCAGAAGGCAGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSWRFF*QKAARS
Trigger: GGACCTGGCTGCCTTCTGCAAGAAGAACCTCCAGGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGCTGGGCCACCACCTGTaGGTAGAGCTCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTLGHHL*VELPQG
Trigger: GCCCTGCGGGAGCTCTACCAACAGGTGGTGGCCCAG...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CGCGACTCGACTCATCTCGATTCGACCGGCGGGCGGCGGCGAGAGGAGGCCAAGAGCTGCACCTTCTCCTaGATCTTGTCTGAGTATAGG +
Preference number: 5 (lower is better)
Translates to: RDSTHLDSTGGRRREEAKSCTFS*ILSEYR
Trigger: CCTATACTCAGACAAGATCAAGGAGAAGGTGCAGCT...CTTGGCCTCCTCTCGCCGCCGCCCGCCGGTCGAATCGAGATGAGTCGAGTCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGCTGGGTCTTCTCCTTaGTGGTGGCCTGCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEAGSSP*WWPAAR
Trigger: ACGAGCTGCAGGCCACCACAAAGGAGAAGACCCAGC...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGCGCTGATCCACTTGTaGAGGTCAGCATGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGALIHL*RSAWVC
Trigger: GCAGACCCATGCTGACCTCAACAAGTGGATCAGCGC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGTTTTCGCACATTCACTaGGTCCTCCACTCGCTTCAG +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRFSHIH*VLHSLQ
Trigger: CTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAAA...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCTACATGTTCTCCAGCTaGCGCTTGCGCTCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPYMFSS*RLRSSA
Trigger: GGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGTA...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGCCAGGCACTGAAGTTCTaGCTCCGGGTTTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: GEEGVCLREPFPAPRPGGQALKF*LRVSIS
Trigger: AGAGATTGAAACCCGGAGCAAGAACTTCAGTGCCTG...GCCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCAGCCAAATGAAGACCTaGCTCACCAGGGCGGGAACC +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPSQMKT*LTRAGT
Trigger: GGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCT...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGACTTCAGGTGCTGATTaGGCACACGTGGAAGGGGGA +
Preference number: 5 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRTSGAD*AHVEGG
Trigger: TCCCCCTTCCACGTGTGCCAAATCAGCACCTGAAGT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp AGCCAACATCCGATTGACACTGGTCAGGTCCTTGCCCGGGTCGTCTaGCCGCAGCTGGTCCTCCATGGCGCTGATCCACTTGTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: SQHPIDTGQVLARVV*PQLVLHGADPLVEV
Trigger: GACCTCAACAAGTGGATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGACCCGGGCAAGGACCTGACCAGTGTCAATCGGATGTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp GTCGAGGAGCGGGATGATGCCCAGCTGGCGCTCAGCCACATTGAATaGGTGCTCCAGGTTGTGCCGGGCATTGGAGTCCTTCAGCTTATC +
Preference number: 5 (lower is better)
Translates to: VEERDDAQLALSHIE*VLQVVPGIGVLQLI
Trigger: GATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCCGCTCCTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp ACACCTCCTTTATGCGGGCCTCGATCTGCGGGTGCCCAAACTGCTTaGGCGCAACCATGCCATGAGCCTCCTGGAAGATCTGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: TPPLCGPRSAGAQTA*AQPCHEPPGRSAPG
Trigger: ACCTGGAGCAGATCTTCCAGGAGGCTCATGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCATAAAGGAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp GTTCTTCTTGCAGAAGGCAGCCAGGTCCTTCAGCTGGTCCCACTGTaGCGACACCTCCTTTATGCGGGCCTCGATCTGCGGGTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: VLLAEGSQVLQLVPL*RHLLYAGLDLRVPK
Trigger: TTTGGGCACCCGCAGATCGAGGCCCGCATAAAGGAGGTGTCGGCACAGTGGGACCAGCTGAAGGACCTGGCTGCCTTCTGCAAGAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp GCCACCTGGTGTTCAGATGGTCCTGGTACTGCTTCACCTCCCTGCTaGGTGGGTGGCCACTCTCTACCAAGCTGTTGGCAGCGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: ATWCSDGPGTASPPC*VGGHSLPSCWQRGS
Trigger: TGAACCTCGCTGCCAACAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCTGAACACCAGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp ACTCTGTGGCCGATGTCATGTCAGCAGGCTCTTAGCAGCTCCGCCTaGCTCAGTCTTCATGGAAGGATCCCTGCCCTGGGACTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: TLWPMSCQQALSSSA*LSLHGRIPALGLKR
Trigger: CCGCTTCAGTCCCAGGGCAGGGATCCTTCCATGAAGACTGAGGCAGGCGGAGCTGCTAAGAGCCTGCTGACATGACATCGGCCACAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389720.4
ENST00000644917.1
CDS GCA 90 bp CCTTACTGTTGGAAGCCTTCTTGTTGGGCCCCTCCAGGTCATGCTTaGGGCCCAGGTAGCCTTCCATCTGCACACTCTGCCCATGGTCCC +
Preference number: 5 (lower is better)
Translates to: PYCWKPSCWAPPGHA*GPGSLPSAHSAHGP
Trigger: GGGACCATGGGCAGAGTGTGCAGATGGAAGGCTACCTGGGCCGCAAGCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCAACAGTAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS CCA 90 bp CCTGGTGTTCAGATGGTCCTGGTACTGCTTCACCTCCCTGCTGCGTaGGTGGCCACTCTCTACCAAGCTGTTGGCAGCGAGGTTCACACC +
Preference number: 5 (lower is better)
Translates to: PGVQMVLVLLHLPAA*VATLYQAVGSEVHT
Trigger: GGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCTGAACACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 90 bp GCCAGTATCCAGGCCCTCCAGCCGCTGGCCCAGAAGCAGATACTCTaGGTCCGTCTGGCCTTGGATCACTTTCTCCCCAGACTCCTTAAC +
Preference number: 5 (lower is better)
Translates to: ASIQALQPLAQKQIL*VRLALDHFLPRLLN
Trigger: GTTAAGGAGTCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTGGGCCAGCGGCTGGAGGGCCTGGATACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCAGCCTGGCTGAGCTGTaGTCATTATCCAGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPSLAEL*SLSSSS
Trigger: CGACGAGCTGGATAATGACAACAGCTCAGCCAGGCT...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGAGGACCAGGCGGTGGTaGCCATCTACAATGTCGTGG +
Preference number: 5 (lower is better)
Translates to: NVMSLGWPVSSALWGGVERTRRW*PSTMSW
Trigger: CCACGACATTGTAGATGGCAACCACCGCCTGGTCCT...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTTGCCGACACGCTaGCCCTCCACTGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNTLPTR*PSTAST
Trigger: GGTGCTGGCAGTGGAGGGCAAGCGTGTCGGCAAGGT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCATAGGCGCAGTATATaGTCCTTGCGGGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPHRRSI*SLRAVM
Trigger: CATCACGGCCCGCAAGGACAATATACTGCGCCTATG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTCAGCCGGTGGGCGTCTaGCAGCCAAGCCTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIQPVGV*QPSLQV
Trigger: GACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCTG...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGTCAGCAGCTTGTCGTaGATCCAGAGAGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGVSSLS*IQRVSS
Trigger: GGAGCTCACTCTCTGGATCAACGACAAGCTGCTGAC...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACACTGGTCAGGTCCTaGCCCGGGTCGTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNTLVRS*PGSSDR
Trigger: GCGGTCAGACGACCCGGGCAAGGACCTGACCAGTGT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp AGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAGCTTTTGCAGTGCAGCGTGGAACAGTTGCACAGTTaGCAGATTAGTGCCATAGTC +
Preference number: 5 (lower is better)
Translates to: RGRRPRTRGRRQLLQCSVEQLHS*QISAIV
Trigger: GACTATGGCACTAATCTGCAAACTGTGCAACTGTTC...CACGCTGCACTGCAAAAGCTGCCTTCGCCCGCGTGTCCTGGGCCGACGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTTCTCCAGCTTGCGCTaGCGCTCTTCCGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEFSSLR*RSSATS
Trigger: GGACGTGGCGGAAGAGCGCAAGCGCAAGCTGGAGAA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGCTGTGCCCAACAGGGTaGCATTCCTCTGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVLCPTG*HSSAAA
Trigger: GGCGGCTGCAGAGGAATGCAACCCTGTTGGGCACAG...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp GTCACAAGGCTGGTACCCTTTCCCCTCGGTGAACTTCAGGGTGGCTaGGGTGATGGCCTTCACTTTGTCCCCTTGGATGGCGATGTCAGC +
Preference number: 5 (lower is better)
Translates to: VTRLVPFPLGELQGG*GDGLHFVPLDGDVS
Trigger: GCTGACATCGCCATCCAAGGGGACAAAGTGAAGGCCATCACCGCAGCCACCCTGAAGTTCACCGAGGGGAAAGGGTACCAGCCTTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 90 bp GCCGCTCCCAGCGGGCTTCCCACTTCTCATTCATCTCTTTCCTCCTaGACATCACCTGCTGCAGTTTCTCGCGGATCTCCTCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: AAPSGLPTSHSSLSS*TSPAAVSRGSPLRP
Trigger: AGGCCTCAGAGGAGATCCGCGAGAAACTGCAGCAGGTGATGTCCAGGAGGAAAGAGATGAATGAGAAGTGGGAAGCCCGCTGGGAGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCTGAATCTCTTCTCCTaGTCTTTCTTGCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRLNLFS*SFLPRL
Trigger: CAGCCTCGGCAAGAAAGACAAGGAGAAGAGATTCAG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGAGAGGAGGGCGTGTGCCTCAGAGAACCGTTTCCTGCCCCCAGGCCTGGAGGACCTGCTACTTCTTTTaGGGGAAGAAGCTGAATCTC +
Preference number: 5 (lower is better)
Translates to: GRGGRVPQRTVSCPQAWRTCYFF*GKKLNL
Trigger: GAGATTCAGCTTCTTCCCCAAAAAGAAGTAGCAGGT...CCTCCAGGCCTGGGGGCAGGAAACGGTTCTCTGAGGCACACGCCCTCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS-3UTR CAA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGAATGCGTGCTCCAGGTaGTGCCGGGCATTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LITSCHWAGLFPLRCGEENACSR*CRALES
Trigger: GGACTCCAATGCCCGGCACAACCTGGAGCACGCATT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGGCCAGGTCTCTCTCATaGCGGCCTTCCGGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEARSLS*RPSGQS
Trigger: GCTTTGACCGGAAGGCCGCAATGAGAGAGACCTGGC...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCATTTGGACTGCTCCAGTaGGGCCTTCCGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SALWGGVEEASTLMKNTSFGLLQ*GLPPSC
Trigger: GCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAAA...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATCCTGGAGGTTCTTCTaGCAGAAGGCAGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSWRFF*QKAARS
Trigger: GGACCTGGCTGCCTTCTGCAAGAAGAACCTCCAGGA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATTGTCCGTGATCCACTaGCTGGTCTCCTCGCAATCT +
Preference number: 5 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGLSVIH*LVSSQS
Trigger: AGATTGCGAGGAGACCAGCAAGTGGATCACGGACAA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCTTGTCCGTGATCCACTaGCTGGTCTCCTCGCAATCT +
Preference number: 5 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPLSVIH*LVSSQS
Trigger: AGATTGCGAGGAGACCAGCAAGTGGATCACGGACAA...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTACTGCTGTGCCTCGTaGGCGTCCCTCAGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTYCCAS*ASLSRC
Trigger: GCAGCGACTGAGGGACGCCAACGAGGCACAGCAGTA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGATGAAGGCATTCACATaGTCCACCCGCTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: NVMSLGWPVSSALWGGVEMKAFT*STRSCP
Trigger: TGGGCAGGAGCGGGTGGACAATGTGAATGCCTTCAT...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGCAGGCACTGAAGTTCTaGCTCCGGGTTTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRQALKF*LRVSIS
Trigger: AGAGATTGAAACCCGGAGCAAGAACTTCAGTGCCTG...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACTCGCCTTCCTCCTCTaGAGGCCCAGTCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SALWGGVEEASTLMKNTSLAFLL*RPSLLC
Trigger: GCAGAGGAGACTGGGCCTCAAGAGGAGGAAGGCGAG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGGGGGCCTATGTCTGTaGGATATTGCTGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPGGLCL*DIAGLA
Trigger: AGCCAAACCAGCAATATCCAACAGACATAGGCCCCC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp AGGAGCGGGATGATGCCCAGCTGGCGCTCAGCCACATTGAATGCGTaGTCCAGGTTGTGCCGGGCATTGGAGTCCTTCAGCTTATCAAAG +
Preference number: 5 (lower is better)
Translates to: RSGMMPSWRSATLNA*SRLCRALESFSLSK
Trigger: CTTTGATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCCGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp GTCAGCGAGTTGGCAAACTTGCGGCTGTTCAGGACAGTGATGGTCTaGTCGATCCAGGTGAGCAGGTCCGAGGCTAGCCCGCTGTACTTT +
Preference number: 5 (lower is better)
Translates to: VSELANLRLFRTVMV*SIQVSRSEASPLYF
Trigger: AAAGTACAGCGGGCTAGCCTCGGACCTGCTCACCTGGATCGAGCAGACCATCACTGTCCTGAACAGCCGCAAGTTTGCCAACTCGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp CTTCCAGAGTCGTTTGGACTGCTCCAGTTGGGCCTTCCGCCCAGCTaGCATGTTGCTCAGCTCCTCAAAGCACTGCTCCAAGTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LPESFGLLQLGLPPS*HVAQLLKALLQVAD
Trigger: ATCAGCCACTTGGAGCAGTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAAACGACTCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp TCTAAGTCCCGGCTGATCTGCAGCTTGGCTCTGGATGATTCCAGCTaGTTCTTCCTCCTTCCTAGGGGTTCCAGGAGGTCCAGGAACCGC +
Preference number: 5 (lower is better)
Translates to: SKSRLICSLALDDSS*FFLLPRGSRRSRNR
Trigger: GCGGTTCCTGGACCTCCTGGAACCCCTAGGAAGGAGGAAGAAGCAGCTGGAATCATCCAGAGCCAAGCTGCAGATCAGCCGGGACTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp GTTCTCCAGCTTGCGCTTGCGCTCTTCCGCCACGTCCTTCAGCCCTaGGTAGTGCTTGTCCACTTGCCCCTGAAGTCTGATGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: VLQLALALFRHVLQP*VVLVHLPLKSDDLF
Trigger: GAACAGATCATCAGACTTCAGGGGCAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTGGCGGAAGAGCGCAAGCGCAAGCTGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp TTTCAGCTCAAGCGTGGTGGGCTTCTCCAGGGCAGCAAAGCGCTCTaGCCAGCTGGCCGTGGACTTCTCAAAAGCCTCATGCCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: FQLKRGGLLQGSKAL*PAGRGLLKSLMPLD
Trigger: ATCAAGAGGCATGAGGCTTTTGAGAAGTCCACGGCCAGCTGGGCAGAGCGCTTTGCTGCCCTGGAGAAGCCCACCACGCTTGAGCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000542694.2
ENST00000553938.5
ENST00000644917.1
CDS GCA 90 bp AAAGCCCTAAAACTAAGGGTACCAGGTCCTAAGTCTGCCCGCCCCTaGCACCTTACAAAGGGAGAACCCAGACCCTCCCTGGCCATCAGC +
Preference number: 5 (lower is better)
Translates to: KALKLRVPGPKSARP*HLTKGEPRPSLAIS
Trigger: GCTGATGGCCAGGGAGGGTCTGGGTTCTCCCTTTGTAAGGTGGCAGGGGCGGGCAGACTTAGGACCTGGTACCCTTAGTTTTAGGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 90 bp CTCGTCGTCTGGGGCGTCCCAGCGGGCATTGATCCTGCTGTAAGGTaGCTGGTTGCCCACATTTTCAAACTCTGTGGCCGATGTCATGTC +
Preference number: 5 (lower is better)
Translates to: LVVWGVPAGIDPAVR*LVAHIFKLCGRCHV
Trigger: GACATGACATCGGCCACAGAGTTTGAAAATGTGGGCAACCAGCCACCTTACAGCAGGATCAATGCCCGCTGGGACGCCCCAGACGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 90 bp GTGTTCAGATGGTCCTGGTACTGCTTCACCTCCCTGCTGCGTGGGTaGCCACTCTCTACCAAGCTGTTGGCAGCGAGGTTCACACCATCA +
Preference number: 5 (lower is better)
Translates to: VFRWSWYCFTSLLRG*PLSTKLLAARFTPS
Trigger: TGATGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCTGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGGCATGGTCAATAACCTaGCCGACACGCTTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEAWSIT*PTRLPS
Trigger: GGAGGGCAAGCGTGTCGGCAAGGTTATTGACCATGC...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCGCCCAGCTGCCATGTaGCTCAGCTCCTCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNRPAAM*LSSSKH
Trigger: GTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGCG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCCTCCTCCAAGTGTTTTaGCCGCTGACCAATATCCTC +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPLLQVF*PLTNIL
Trigger: GAGGATATTGGTCAGCGGCAAAAACACTTGGAGGAG...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCCTCCTCCAAGTGTTTTaGCCGCTGACCAATATCCTC +
Preference number: 5 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPLLQVF*PLTNIL
Trigger: GAGGATATTGGTCAGCGGCAAAAACACTTGGAGGAG...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGGTCCGTCTGGCCTaGGATCACTTTCTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEWVRLA*DHFLPR
Trigger: TCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCA...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GAGAGTCCCAGTTCTGCGGAAGCCCAGTGGGAAGGAGGCTGGCAGCTCCCAAGGAGCTGCACCTTCTCCTaGATCTTGTCTGAGTATAGG +
Preference number: 5 (lower is better)
Translates to: ESPSSAEAQWEGGWQLPRSCTFS*ILSEYR
Trigger: CCTATACTCAGACAAGATCAAGGAGAAGGTGCAGCT...CCTTGGGAGCTGCCAGCCTCCTTCCCACTGGGCTTCCGCAGAACTGGGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAATGGCGCTGATCCACTaGTTGAGGTCAGCATGGGTC +
Preference number: 5 (lower is better)
Translates to: WALVPRLPKDWPRETVEGMALIH*LRSAWV
Trigger: GACCCATGCTGACCTCAACAAGTGGATCAGCGCCAT...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTTCTCCAGCTTGCGCTaGCGCTCTTCCGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: STRALPFSGLWSCLLEMPFSSLR*RSSATS
Trigger: GGACGTGGCGGAAGAGCGCAAGCGCAAGCTGGAGAA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGGACCTAACCCTAGTTaGATACTGGGCCAGAACTGT +
Preference number: 5 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPGPNPS*ILGQNC
Trigger: ACAGTTCTGGCCCAGTATCAAACTAGGGTTAGGTCC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGAAGGTGATAGAAACTaGACTGCAGGCCCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: WALVPRLPKDWPRETVEGEGDRN*TAGPGD
Trigger: GTCCCCAGGGCCTGCAGTCAAGTTTCTATCACCTTC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACTCGGGTCTGTGGAGTaGCTTGCTGGAAATGCCTCA +
Preference number: 5 (lower is better)
Translates to: WALVPRLPKDWPRETVEGLGSVE*LAGNAS
Trigger: TGAGGCATTTCCAGCAAGCAACTCCACAGACCCGAG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp ATGCCCAGCTGGCGCTCAGCCACATTGAATGCGTGCTCCAGGTTGTaGCGGGCATTGGAGTCCTTCAGCTTATCAAAGTCGATCAGGTCG +
Preference number: 5 (lower is better)
Translates to: MPSWRSATLNACSRL*RALESFSLSKSIRS
Trigger: CGACCTGATCGACTTTGATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp CGCCCTGGAACTGGAAAAAGTTCTCAGCATCCTGGAGGTTCTTCTTaGAGAAGGCAGCCAGGTCCTTCAGCTGGTCCCACTGTGCCGACA +
Preference number: 5 (lower is better)
Translates to: RPGTGKSSQHPGGSS*RRQPGPSAGPTVPT
Trigger: TGTCGGCACAGTGGGACCAGCTGAAGGACCTGGCTGCCTTCTGCAAGAAGAACCTCCAGGATGCTGAGAACTTTTTCCAGTTCCAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTCTGTTGGAAGCCTTCTaGTTGGGCCCCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RGEADQGVPHLHGSGPDILLEAF*LGPSRS
Trigger: TGACCTGGAGGGGCCCAACAAGAAGGCTTCCAACAG...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAATGCGCATCTTCCCCTaGGTGGGCTTTGGCAGCATC +
Preference number: 5 (lower is better)
Translates to: SALWGGVEEASTLMKNTSMRIFP*VGFGSI
Trigger: GATGCTGCCAAAGCCCACCAAGGGGAAGATGCGCAT...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCACGACCTTCCTGAGTTaGGACCACAATGTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPTTFLS*DHNVLN
Trigger: ATTCAGGACATTGTGGTCCAAACTCAGGAAGGTCGT...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGAATGCGTGCTCCAGGTaGTGCCGGGCATTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGNACSR*CRALES
Trigger: GGACTCCAATGCCCGGCACAACCTGGAGCACGCATT...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGCTTTCCCAGGCCCTGTaGATGTCAGACACTAGTTTC +
Preference number: 5 (lower is better)
Translates to: NVMSLGWPVSSALWGGVELSQAL*MSDTSF
Trigger: GAAACTAGTGTCTGACATCAACAGGGCCTGGGAAAG...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGATCAGCTTCCATCAACTaGTGCTTCTGTAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGSASIN*CFCSRS
Trigger: AGACCTGCTACAGAAGCACAAGTTGATGGAAGCTGA...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGTCATCCTCAAAGGCCTaGTGCTTGCGCTGTAAGATG +
Preference number: 5 (lower is better)
Translates to: NVMSLGWPVSSALWGGVESSSKA*CLRCKM
Trigger: CATCTTACAGCGCAAGCACAAGGCCTTTGAGGATGA...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGGCCACCACCTGTaGGTAGAGCTCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRLGHHL*VELPQG
Trigger: GCCCTGCGGGAGCTCTACCAACAGGTGGTGGCCCAG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACCCGCCCCAGGTCTTTaGTGGACTCCACTACCTTTG +
Preference number: 5 (lower is better)
Translates to: SALWGGVEEASTLMKNTSPAPGL*WTPLPL
Trigger: CAAAGGTAGTGGAGTCCACAAAAGACCTGGGGCGGG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGACGCTGGTAGCTGTCTaGGTGCCCGTCAATCTCATC +
Preference number: 5 (lower is better)
Translates to: LITSCHWAGLFPLRCGEETLVAV*VPVNLI
Trigger: GATGAGATTGACGGGCACCAAGACAGCTACCAGCGT...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTCCTGGGCCTTCTCGTaGTTCTTCCTGTGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTSWAFS*FFLCLS
Trigger: GGACAGGCACAGGAAGAACAACGAGAAGGCCCAGGA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGACACTGGTCAGGTCCTaGCCCGGGTCGTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: GPELCCFRSRVVGKIWNETLVRS*PGSSDR
Trigger: GCGGTCAGACGACCCGGGCAAGGACCTGACCAGTGT...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGCTCCCTCCTCTCCCATaGAAGGCACCTGGGCAAACA +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTLPPLP*KAPGQT
Trigger: TGTTTGCCCAGGTGCCTTCAATGGGAGAGGAGGGAG...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGCGCCCTCTTCATCCTaGGGGATCTCATCGGAGATG +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNAPSSS*GISSEM
Trigger: CATCTCCGATGAGATCCCCAAGGATGAAGAGGGCGC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGGCAAAGTCCCGGAACTaGTCCCGCAGAAGAGTCACG +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTAKSRN*SRRRVT
Trigger: CGTGACTCTTCTGCGGGACAAGTTCCGGGACTTTGC...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACGCGAGGGTCCCAGCATaGAGAGGGAGAGCCTTAGGC +
Preference number: 5 (lower is better)
Translates to: FRSEPCALATVFNEEWSDARVPA*RGRALG
Trigger: GCCTAAGGCTCTCCCTCTCAATGCTGGGACCCTCGC...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCTATGTCTGTTGGATATaGCTGGTTTGGCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPYVCWI*LVWLPL
Trigger: CAGTGGCAGCCAAACCAGCAATATCCAACAGACATA...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTGTGGCACACACAGGGTCTCCCGCAGACAGGATGCAATaGAGCATTTGGCTTTGGGAT +
Preference number: 5 (lower is better)
Translates to: LARALGELSPGVAHTGSPADRMQ*SIWLWD
Trigger: ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGC...GGGAGACCCTGTGTGTGCCACACCAGGGCTAAGCTCTCCCAGTGCCCTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCCACCCCCGACCCGCTaGACTGCTCTCTTGGACCTA +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDPPPTR*TALLDL
Trigger: TAGGTCCAAGAGAGCAGTCAAGCGGGTCGGGGGTGG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTGGGGAGGGTGGGCCCTaGTCCCTAGGCTCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSGEGGP*SLGSLK
Trigger: CTTTAGGGAGCCTAGGGACAAGGGCCCACCCTCCCC...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGAGGACCGCCTGACCTaGCCCAGAAGGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDEDRLT*PRRSFL
Trigger: GAGGAAGCTCCTTCTGGGCAAGGTCAGGCGGTCCTC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp CCTGCAGGTAGCTCCATAGGCGCAGTATATTGTCCTTGCGGGCCGTaGTGCGCTTCTGGTCATGGTAGTTCTCTTTCTCCAGCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: PAGSSIGAVYCPCGP*CASGHGSSLSPAPE
Trigger: CTCAGGAGCTGGAGAAAGAGAACTACCATGACCAGAAGCGCATCACGGCCCGCAAGGACAATATACTGCGCCTATGGAGCTACCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTATGCTCTGGGACTCGTaGATGGCGGTGCTCACGCCC +
Preference number: 5 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSMLWDS*MAVLTP
Trigger: GGGCGTGAGCACCGCCATCAACGAGTCCCAGAGCAT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGACTGAATCTCTTCTCCTaGTCTTTCTTGCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WALVPRLPKDWPRETVEGLNLFS*SFLPRL
Trigger: CAGCCTCGGCAAGAAAGACAAGGAGAAGAGATTCAG...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTGTACACGCTGCTCCTaGAGGAACTGGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNCTRCS*RNWRAL
Trigger: CAAGGCTCTCCAGTTCCTCAAGGAGCAGCGTGTACA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp AACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGACGACCTTCCTGAGTTaGGACCACAATGTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: NVMSLGWPVSSALWGGVETTFLS*DHNVLN
Trigger: ATTCAGGACATTGTGGTCCAAACTCAGGAAGGTCGT...CTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACAGGTCGGGCCGGTGCTaGTGTATCAGGGCATTAAAG +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNRSGRC*CIRALK
Trigger: CTTTAATGCCCTGATACACAAGCACCGGCCCGACCT...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGAGCGAGTTGGCAAACTaGCGGCTGTTCAGGACAGTG +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTSELAN*RLFRTV
Trigger: CACTGTCCTGAACAGCCGCAAGTTTGCCAACTCGCT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACATAGGCGCAGTATATaGTCCTTGCGGGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: SALWGGVEEASTLMKNTSHRRSI*SLRAVM
Trigger: CATCACGGCCCGCAAGGACAATATACTGCGCCTATG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACGTGATGGCCTTCACTTaGTCCCCTTGGATGGCGATG +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNVMAFT*SPWMAM
Trigger: CATCGCCATCCAAGGGGACAAAGTGAAGGCCATCAC...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGATCAAAGGCCTTGTGCTaGCGCTGTAAGATGAGCACA +
Preference number: 5 (lower is better)
Translates to: WALVPRLPKDWPRETVEGSKALC*RCKMST
Trigger: TGTGCTCATCTTACAGCGCAAGCACAAGGCCTTTGA...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCCTCCAGGAAGTCCTaGTGCTTTTTCCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSSRKS*CFFPRA
Trigger: GGCCCTGGGGAAAAAGCACAAGGACTTCCTGGAGGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCACCTTCTCCTTGATCTaGTCTGAGTATAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPTFSLI*SEYRFP
Trigger: GGGAAACCTATACTCAGACAAGATCAAGGAGAAGGT...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGATGGCGCTGATCCACTaGTTGAGGTCAGCATGGGTC +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTMALIH*LRSAWV
Trigger: GACCCATGCTGACCTCAACAAGTGGATCAGCGCCAT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTGCAAAGTCCCGGAACTaGTCCCGCAGAAGAGTCACG +
Preference number: 5 (lower is better)
Translates to: STRALPFSGLWSCLLEMPAKSRN*SRRRVT
Trigger: CGTGACTCTTCTGCGGGACAAGTTCCGGGACTTTGC...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGGTTTTCAATGAGGAATGGTCTGACCTTGCTGCCCTTCCTGGGACCGCCTGTGGGTCTGTGGAGTTGCTaGCTGGAAATGCCTCACTTC +
Preference number: 5 (lower is better)
Translates to: RFSMRNGLTLLPFLGPPVGLWSC*LEMPHF
Trigger: GAAGTGAGGCATTTCCAGCAAGCAACTCCACAGACC...CACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTCCTCATTGAAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGAGGACCGCCTGACCTaGCCCAGAAGGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTEDRLT*PRRSFL
Trigger: GAGGAAGCTCCTTCTGGGCAAGGTCAGGCGGTCCTC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCTGTGCCCAACAGGGTaGCATTCCTCTGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTLCPTG*HSSAAA
Trigger: GGCGGCTGCAGAGGAATGCAACCCTGTTGGGCACAG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACAGGGCCAGCCCCAGATaGCATGGTCTGTGCCCAACA +
Preference number: 5 (lower is better)
Translates to: FRSEPCALATVFNEEWSDRASPR*HGLCPT
Trigger: TGTTGGGCACAGACCATGCAATCTGGGGCTGGCCCT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp TGTTGTCATTATCCAGCTCGTCGTCTGGGGCGTCCCAGCGGGCATTaGTCCTGCTGTAAGGTGGCTGGTTGCCCACATTTTCAAACTCTG +
Preference number: 5 (lower is better)
Translates to: CCHYPARRLGRPSGH*SCCKVAGCPHFQTL
Trigger: CAGAGTTTGAAAATGTGGGCAACCAGCCACCTTACAGCAGGATCAATGCCCGCTGGGACGCCCCAGACGACGAGCTGGATAATGACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp CACCTTTCAGCAAGAGGTAGGAAGGCCCCCAAGCAGCTGGATGCCTaGAGCACCAAGGACATCTTCAGCCAGGAGGTCAGAAAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: HLSARGRKAPKQLDA*STKDIFSQEVRKGS
Trigger: AGAACCTTTTCTGACCTCCTGGCTGAAGATGTCCTTGGTGCTTCAGGCATCCAGCTGCTTGGGGGCCTTCCTACCTCTTGCTGAAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 90 bp GGCAGATATAGGGAGGGAAGCTTGCCAGACCCTCTCAGCCATGTTTaGCCCTCTTACCCAGCCTCTGCTCTCCTGGGATTGGTTTTACTA +
Preference number: 5 (lower is better)
Translates to: GRYREGSLPDPLSHV*PSYPASALLGLVLL
Trigger: TAGTAAAACCAATCCCAGGAGAGCAGAGGCTGGGTAAGAGGGGCAAACATGGCTGAGAGGGTCTGGCAAGCTTCCCTCCCTATATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 90 bp CAGAGTGTATTGTCTCTGCTGCTACCTCACTCTTGCTGTGAATACTaGTGCTTCCCAGGCGGACCTGCTGGCTCCTCTCTTGGAGTCTAC +
Preference number: 5 (lower is better)
Translates to: QSVLSLLLPHSCCEY*CFPGGPAGSSLGVY
Trigger: GTAGACTCCAAGAGAGGAGCCAGCAGGTCCGCCTGGGAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAATACACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS-3UTR CAA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGAGCCTGGCTGAGCTGTaGTCATTATCCAGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: KLITSCHWAGLFPLRCGESLAEL*SLSSSS
Trigger: CGACGAGCTGGATAATGACAACAGCTCAGCCAGGCT...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTACGCCCGTCAGCGAGTaGGCAAACTTGCGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSTPVSE*ANLRLF
Trigger: GAACAGCCGCAAGTTTGCCAACTCGCTGACGGGCGT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACCAGATTCCCCTTCTCTaGAAACTTGGGCGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNQIPLL*KLGRLL
Trigger: GAGAAGCCGCCCAAGTTTCAAGAGAAGGGGAATCTG...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGCCAGGTCTCTCTCATaGCGGCCTTCCGGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEARSLS*RPSGQS
Trigger: GCTTTGACCGGAAGGCCGCAATGAGAGAGACCTGGC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCGCAGTATATTGTCCTaGCGGGCCGTGATGCGCTTC +
Preference number: 5 (lower is better)
Translates to: FRSEPCALATVFNEEWSDRSILS*RAVMRF
Trigger: GAAGCGCATCACGGCCCGCAAGGACAATATACTGCG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGCGCCCAGCTGCCATGTaGCTCAGCTCCTCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: GPELCCFRSRVVGKIWNERPAAM*LSSSKH
Trigger: GTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGCG...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATTTGGACTGCTCCAGTaGGGCCTTCCGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRFGLLQ*GLPPSC
Trigger: GCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAAA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGAACTTCCAGAGTCGTTaGGACTGCTCCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGNFQSR*DCSSWA
Trigger: GGCCCAACTGGAGCAGTCCAAACGACTCTGGAAGTT...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGATCTGCTCCTTCTCCTaGATCCAGCTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTICSFS*IQLSAS
Trigger: TGAGGCTGAGAGCTGGATCAAGGAGAAGGAGCAGAT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTCCTGGAGGTTCTTCTaGCAGAAGGCAGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDSWRFF*QKAARS
Trigger: GGACCTGGCTGCCTTCTGCAAGAAGAACCTCCAGGA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCCCGCCCCAGGTCTTTaGTGGACTCCACTACCTTTG +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDPAPGL*WTPLPL
Trigger: CAAAGGTAGTGGAGTCCACAAAAGACCTGGGGCGGG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCACCGTCAATCTCATCCTaGATACCTGCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SALWGGVEEASTLMKNTSPSISS*IPACCC
Trigger: GCAGCAGCATGCAGGTATCAAGGATGAGATTGACGG...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGCTGGGTCTTCTCCTTaGTGGTGGCCTGCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTAGSSP*WWPAAR
Trigger: ACGAGCTGCAGGCCACCACAAAGGAGAAGACCCAGC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATGCGCTGATCCACTTGTaGAGGTCAGCATGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDALIHL*RSAWVC
Trigger: GCAGACCCATGCTGACCTCAACAAGTGGATCAGCGC...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTTCTCCAGCTTGCGCTaGCGCTCTTCCGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHFSSLR*RSSATS
Trigger: GGACGTGGCGGAAGAGCGCAAGCGCAAGCTGGAGAA...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACTACATGTTCTCCAGCTaGCGCTTGCGCTCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: FRSEPCALATVFNEEWSDYMFSS*RLRSSA
Trigger: GGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGTA...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCGTCGGTCTCCCGCTaGAGCTGGAACAGGTGGTAC +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTSSVSR*SWNRWY
Trigger: GTACCACCTGTTCCAGCTCAAGCGGGAGACCGACGA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGCAGGCACTGAAGTTCTaGCTCCGGGTTTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: LITSCHWAGLFPLRCGEEQALKF*LRVSIS
Trigger: AGAGATTGAAACCCGGAGCAAGAACTTCAGTGCCTG...CTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp AGCCACCAAGCCATGTGGTCCCGCTGGCTTCATCCTCCTCTGGATTCCTGCCCCGATGCAATTGAGCATTaGGCTTTGGGATGCTTTACT +
Preference number: 5 (lower is better)
Translates to: SHQAMWSRWLHPPLDSCPDAIEH*ALGCFT
Trigger: AGTAAAGCATCCCAAAGCCAAATGCTCAATTGCATC...GGGGCAGGAATCCAGAGGAGGATGAAGCCAGCGGGACCACATGGCTTGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATCCATTCCTGGGGACGTaGGTTGCAGAGCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDPFLGT*VAELLV
Trigger: CACCAGAAGCTCTGCAACCAACGTCCCCAGGAATGG...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCTCGGGTCTGTGGAGTaGCTTGCTGGAAATGCCTCA +
Preference number: 5 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGLGSVE*LAGNAS
Trigger: TGAGGCATTTCCAGCAAGCAACTCCACAGACCCGAG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp CATCTTTCAGAGTGTATTGTCTCTGCTGCTACCTCACTCTTGCTGTaGATACTGCTGCTTCCCAGGCGGACCTGCTGGCTCCTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: HLSECIVSAATSLLL*ILLLPRRTCWLLSW
Trigger: CCAAGAGAGGAGCCAGCAGGTCCGCCTGGGAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAATACACTCTGAAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 90 bp ATGGGTGCCTGGCCCACATTCCTTGGCAGGGACATTCAGAGGCTATaGCAGTGCGATCAAAAATTATGTGGCCAGGTCACAGGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: MGAWPTFLGRDIQRL*QCDQKLCGQVTGWL
Trigger: AAGCCAACCTGTGACCTGGCCACATAATTTTTGATCGCACTGGCATAGCCTCTGAATGTCCCTGCCAAGGAATGTGGGCCAGGCACCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 90 bp TGCCTCATCTTTCAGAGTGTATTGTCTCTGCTGCTACCTCACTCTTaGTGTGAATACTGCTGCTTCCCAGGCGGACCTGCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: CLIFQSVLSLLLPHS*CEYCCFPGGPAGSS
Trigger: AGAGGAGCCAGCAGGTCCGCCTGGGAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAATACACTCTGAAAGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATTCTCCTTGTCTTTCTaGCCGAGGCTGGCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRFSLSF*PRLASG
Trigger: CCCCGACGCCAGCCTCGGCAAGAAAGACAAGGAGAA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGAGGACCAGGCGGTGGTaGCCATCTACAATGTCGTGG +
Preference number: 5 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVERTRRW*PSTMSW
Trigger: CCACGACATTGTAGATGGCAACCACCGCCTGGTCCT...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATAGGTCGGGCCGGTGCTaGTGTATCAGGGCATTAAAG +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDRSGRC*CIRALK
Trigger: CTTTAATGCCCTGATACACAAGCACCGGCCCGACCT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGGCATGGTCAATAACCTaGCCGACACGCTTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEAWSIT*PTRLPS
Trigger: GGAGGGCAAGCGTGTCGGCAAGGTTATTGACCATGC...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATACGCCCGTCAGCGAGTaGGCAAACTTGCGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHTPVSE*ANLRLF
Trigger: GAACAGCCGCAAGTTTGCCAACTCGCTGACGGGCGT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACGCCCAGCTGCCATGTaGCTCAGCTCCTCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRRPAAM*LSSSKH
Trigger: GTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGCG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTATCTGCTCCTTCTCCTaGATCCAGCTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: STRALPFSGLWSCLLEMPICSFS*IQLSAS
Trigger: TGAGGCTGAGAGCTGGATCAAGGAGAAGGAGCAGAT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACTCCACTACCTTTGTCTaGTCCGTGATCCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: VSSALWGGVEEASTLMKNSTTFV*SVIHLL
Trigger: CAGCAAGTGGATCACGGACAAGACAAAGGTAGTGGA...GTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGCTCCTCCAAGTGTTTTaGCCGCTGACCAATATCCTC +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTLLQVF*PLTNIL
Trigger: GAGGATATTGGTCAGCGGCAAAAACACTTGGAGGAG...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTATGGCTTCAGCCTGCTaGGCATCTTTCTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: STRALPFSGLWSCLLEMPMASAC*ASFWNS
Trigger: GGAGTTCCAGAAAGATGCCAAGCAGGCTGAAGCCAT...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGAAGACCTTATCCCGGTaGTTCTCCATAGACCCCAAG +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTKTLSR*FSIDPK
Trigger: CTTGGGGTCTATGGAGAACAACCGGGATAAGGTCTT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGTTAGCCAACATCCGATaGACACTGGTCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTLANIR*TLVRSL
Trigger: CAAGGACCTGACCAGTGTCAATCGGATGTTGGCTAA...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCTCCCTCCTCTCCCATaGAAGGCACCTGGGCAAACA +
Preference number: 5 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSLPPLP*KAPGQT
Trigger: TGTTTGCCCAGGTGCCTTCAATGGGAGAGGAGGGAG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACGGCTGATCTGCAGCTaGGCTCTGGATGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTRLICS*ALDDSS
Trigger: GCTGGAATCATCCAGAGCCAAGCTGCAGATCAGCCG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGCCCTTGTCCCTAGGCTCCCTAAAGACTGGCCCAGGGAAACAGTTGAGGGAGAACAGTTGCACAGTTaGCAGATTAGTGCCATAGTC +
Preference number: 5 (lower is better)
Translates to: WALVPRLPKDWPRETVEGEQLHS*QISAIV
Trigger: GACTATGGCACTAATCTGCAAACTGTGCAACTGTTC...TCCCTCAACTGTTTCCCTGGGCCAGTCTTTAGGGAGCCTAGGGACAAGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGGAGTGGAGGACTTCTTCATGAACAGTaGCACAGTTTGCAGATTAGT +
Preference number: 5 (lower is better)
Translates to: RHVTGLACFLCAVGRSGGLLHEQ*HSLQIS
Trigger: ACTAATCTGCAAACTGTGCAACTGTTCATGAAGAAG...TCCTCCACTCCTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACCACGTGGTCAAAGTCTaGCCCCATTTCCGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: FRSEPCALATVFNEEWSDHVVKV*PHFRGR
Trigger: TCTTCCCCGGAAATGGGGCAAGACTTTGACCACGTG...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACATGAAGGCATTCACATaGTCCACCCGCTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: FRSEPCALATVFNEEWSDMKAFT*STRSCP
Trigger: TGGGCAGGAGCGGGTGGACAATGTGAATGCCTTCAT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp CCACTCTCTACCAAGCTGTTGGCAGCGAGGTTCACACCATCAATCTaGGTCATCAAGGTCTTCATCTCCTGGTCCAGGATGTCGAACCTG +
Preference number: 5 (lower is better)
Translates to: PLSTKLLAARFTPSI*VIKVFISWSRMSNL
Trigger: CAGGTTCGACATCCTGGACCAGGAGATGAAGACCTTGATGACTCAGATTGATGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGAGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 90 bp CTTGCCAGACCCTCTCAGCCATGTTTGCCCCTCTTACCCAGCCTCTaGTCTCCTGGGATTGGTTTTACTAGAGACCTCCATGTCTACATT +
Preference number: 5 (lower is better)
Translates to: LARPSQPCLPLLPSL*SPGIGFTRDLHVYI
Trigger: AATGTAGACATGGAGGTCTCTAGTAAAACCAATCCCAGGAGAGCAGAGGCTGGGTAAGAGGGGCAAACATGGCTGAGAGGGTCTGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS-3UTR CAA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTTGTACACGCTGCTCCTaGAGGAACTGGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTCTRCS*RNWRAL
Trigger: CAAGGCTCTCCAGTTCCTCAAGGAGCAGCGTGTACA...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATAGGACCAGGCGGTGGTaGCCATCTACAATGTCGTGG +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHRTRRW*PSTMSW
Trigger: CCACGACATTGTAGATGGCAACCACCGCCTGGTCCT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATGGCGCTCAGCCACATaGAATGCGTGCTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRWRSAT*NACSRL
Trigger: CAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAGTGATGGCCTTCACTTaGTCCCCTTGGATGGCGATG +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTVMAFT*SPWMAM
Trigger: CATCGCCATCCAAGGGGACAAAGTGAAGGCCATCAC...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGTGATGGCCTTCACTTaGTCCCCTTGGATGGCGATG +
Preference number: 5 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEVMAFT*SPWMAM
Trigger: CATCGCCATCCAAGGGGACAAAGTGAAGGCCATCAC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCCTCTGCGCTGTGGGGAGTCAAAGGCCTTGTGCTaGCGCTGTAAGATGAGCACA +
Preference number: 5 (lower is better)
Translates to: KLITSCHWAGLFPLRCGESKALC*RCKMST
Trigger: TGTGCTCATCTTACAGCGCAAGCACAAGGCCTTTGA...CTCCCCACAGCGCAGAGGAAACAGGCCAGCCCAGTGACATGACGTTATTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTTCATCCTCAAAGGCCTaGTGCTTGCGCTGTAAGATG +
Preference number: 5 (lower is better)
Translates to: STRALPFSGLWSCLLEMPSSSKA*CLRCKM
Trigger: CATCTTACAGCGCAAGCACAAGGCCTTTGAGGATGA...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTCTCTCTACCAAGCTGTaGGCAGCGAGGTTCACACCA +
Preference number: 5 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTLSTKL*AARFTP
Trigger: TGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGAG...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTTGTCCGTGATCCACTaGCTGGTCTCCTCGCAATCT +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDLSVIH*LVSSQS
Trigger: AGATTGCGAGGAGACCAGCAAGTGGATCACGGACAA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGTCCACTACCTTTGTCTaGTCCGTGATCCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGSTTFV*SVIHLL
Trigger: CAGCAAGTGGATCACGGACAAGACAAAGGTAGTGGA...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACCCGCCCCAGGTCTTTaGTGGACTCCACTACCTTTG +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRPAPGL*WTPLPL
Trigger: CAAAGGTAGTGGAGTCCACAAAAGACCTGGGGCGGG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGAGCTGCACCTTCTCCTaGATCTTGTCTGAGTATAGG +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTSCTFS*ILSEYR
Trigger: CCTATACTCAGACAAGATCAAGGAGAAGGTGCAGCT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGTCAGCAGCTTGTCGTaGATCCAGAGAGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTVSSLS*IQRVSS
Trigger: GGAGCTCACTCTCTGGATCAACGACAAGCTGCTGAC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTATGGCGCTGATCCACTaGTTGAGGTCAGCATGGGTC +
Preference number: 5 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSMALIH*LRSAWV
Trigger: GACCCATGCTGACCTCAACAAGTGGATCAGCGCCAT...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACGGCTGATCTGCAGCTaGGCTCTGGATGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRRLICS*ALDDSS
Trigger: GCTGGAATCATCCAGAGCCAAGCTGCAGATCAGCCG...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACACGTGGTCAAAGTCTaGCCCCATTTCCGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTHVVKV*PHFRGR
Trigger: TCTTCCCCGGAAATGGGGCAAGACTTTGACCACGTG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCCATTCCTGGGGACGTaGGTTGCAGAGCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHPFLGT*VAELLV
Trigger: CACCAGAAGCTCTGCAACCAACGTCCCCAGGAATGG...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAAGCCAAATGAAGACCTaGCTCACCAGGGCGGGAACC +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSQMKT*LTRAGT
Trigger: GGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGATGGGTTTCCTCTGGTaGGTGGAAGCACGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEMGFLW*VEARLS
Trigger: GCTCAACCGTGCTTCCACCAACCAGAGGAAACCCAT...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp TACTGTCGGAGTAGGCAGATAAATATGAGCAGGTGGGAAAGCCTCTaGGAAAGGGAGGTCTGGAAAGTCTCACACCCCAGAGACCATCCA +
Preference number: 5 (lower is better)
Translates to: YCRSRQINMSRWESL*EREVWKVSHPRDHP
Trigger: TGGATGGTCTCTGGGGTGTGAGACTTTCCAGACCTCCCTTTCTCAGAGGCTTTCCCACCTGCTCATATTTATCTGCCTACTCCGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 90 bp AAGCTCCAGGCAGGCACTGAAGTTCTTGCTCCGGGTTTCAATCTCTaGATTGATGCCCTGGTGATACTTCATGAGCAGTTCCACAGAGGA +
Preference number: 5 (lower is better)
Translates to: KLQAGTEVLAPGFNL*IDALVILHEQFHRG
Trigger: TCCTCTGTGGAACTGCTCATGAAGTATCACCAGGGCATCAATGCAGAGATTGAAACCCGGAGCAAGAACTTCAGTGCCTGCCTGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 90 bp AGGTCCTTTCTCCATCATTTGATGGGAACTTTTTGGACAGGGCAGTaGTTCCTAACCCTGGCTGCCTTCCGCAATCACCTCAGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: RSFLHHLMGTFWTGQ*FLTLAAFRNHLRCF
Trigger: AAAGCACCTGAGGTGATTGCGGAAGGCAGCCAGGGTTAGGAACCACTGCCCTGTCCAAAAAGTTCCCATCAAATGATGGAGAAAGGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGTTGTTCCAGGACCTGTaGGAAGCCTTCTTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVELFQDL*EAFLLG
Trigger: GCCCAACAAGAAGGCTTCCAACAGGTCCTGGAACAA...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATTGTTCCAGGACCTGTaGGAAGCCTTCTTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTLFQDL*EAFLLG
Trigger: GCCCAACAAGAAGGCTTCCAACAGGTCCTGGAACAA...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAATCTCCTCCTCATCCTaGCCATGGAAGAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRISSSS*PWKSHS
Trigger: CGAGTGGCTCTTCCATGGCAAGGATGAGGAGGAGAT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATAGCCTGGCTGAGCTGTaGTCATTATCCAGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHSLAEL*SLSSSS
Trigger: CGACGAGCTGGATAATGACAACAGCTCAGCCAGGCT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCAGATTCCCCTTCTCTaGAAACTTGGGCGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEQIPLL*KLGRLL
Trigger: GAGAAGCCGCCCAAGTTTCAAGAGAAGGGGAATCTG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATCTCTCTACCAAGCTGTaGGCAGCGAGGTTCACACCA +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHLSTKL*AARFTP
Trigger: TGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGAG...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTCCACTACCTTTGTCTaGTCCGTGATCCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDSTTFV*SVIHLL
Trigger: CAGCAAGTGGATCACGGACAAGACAAAGGTAGTGGA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATACGCTGGTAGCTGTCTaGGTGCCCGTCAATCTCATC +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHTLVAV*VPVNLI
Trigger: GATGAGATTGACGGGCACCAAGACAGCTACCAGCGT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAACGCTGGTAGCTGTCTaGGTGCCCGTCAATCTCATC +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRTLVAV*VPVNLI
Trigger: GATGAGATTGACGGGCACCAAGACAGCTACCAGCGT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGTGAGGACGACCTTCTCCTTGATCTaGTCTGAGTATAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: WGGVEEASTLMKNTSVRTTFSLI*SEYRFP
Trigger: GGGAAACCTATACTCAGACAAGATCAAGGAGAAGGT...CGTCCTCACTGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp TCTGCGCTGTGGGGAGGAGTGGAGGAGGCTAGTACTCTCATGAAGAACACCTCAGAACAGTTGCACAGTTaGCAGATTAGTGCCATAGTC +
Preference number: 5 (lower is better)
Translates to: SALWGGVEEASTLMKNTSEQLHS*QISAIV
Trigger: GACTATGGCACTAATCTGCAAACTGTGCAACTGTTC...TGAGGTGTTCTTCATGAGAGTACTAGCCTCCTCCACTCCTCCCCACAGCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATTGGATATTGCTGGTTaGGCTGCCACTGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRLDIAG*AATGSG
Trigger: CCCACTCCCAGTGGCAGCCAAACCAGCAATATCCAA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGGGGGGCCTATGTCTGTaGGATATTGCTGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVEGGLCL*DIAGLA
Trigger: AGCCAAACCAGCAATATCCAACAGACATAGGCCCCC...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CGTGGAGAAGCTGATCAAGGGGTACCACACCTTCATGGCTCTGGCCCTGACATTATTGAGCATTTGGCTTaGGGATGCTTTACTGCAGGT +
Preference number: 5 (lower is better)
Translates to: RGEADQGVPHLHGSGPDIIEHLA*GCFTAG
Trigger: ACCTGCAGTAAAGCATCCCAAAGCCAAATGCTCAAT...AATGTCAGGGCCAGAGCCATGAAGGTGTGGTACCCCTTGATCAGCTTCTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCAAAGGCCTACTTTATaGCTAGGTGAGTGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: STRALPFSGLWSCLLEMPQRPTL*LGECSH
Trigger: GTGACTGCACTCACCTAGCAATAAAGTAGGCCTTTG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAAGCACACAGTACAGGTaGTTCCAGGACCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTSTQYR*FQDLLE
Trigger: TTCCAACAGGTCCTGGAACAACCTGTACTGTGTGCT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TTCAGATCAGAGCCCTGTGCCCTAGCCACGGTTTTCAATGAGGAATGGTCTGACACGACCTTCCTGAGTTaGGACCACAATGTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: FRSEPCALATVFNEEWSDTTFLS*DHNVLN
Trigger: ATTCAGGACATTGTGGTCCAAACTCAGGAAGGTCGT...GTCAGACCATTCCTCATTGAAAACCGTGGCTAGGGCACAGGGCTCTGATCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp AAACTAGTAAATGGGTTTCCTCTGGTTGGTGGAAGCACGGTTGAGCAGGTGGAGCTTTCCCAGGCCCTGTaGATGTCAGACACTAGTTTC +
Preference number: 5 (lower is better)
Translates to: KLVNGFPLVGGSTVEQVELSQAL*MSDTSF
Trigger: GAAACTAGTGTCTGACATCAACAGGGCCTGGGAAAG...CTCCACCTGCTCAACCGTGCTTCCACCAACCAGAGGAAACCCATTTACTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATTCAGCTTCCATCAACTaGTGCTTCTGTAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDSASIN*CFCSRS
Trigger: AGACCTGCTACAGAAGCACAAGTTGATGGAAGCTGA...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGTTAGCCAACATCCGATaGACACTGGTCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GPELCCFRSRVVGKIWNELANIR*TLVRSL
Trigger: CAAGGACCTGACCAGTGTCAATCGGATGTTGGCTAA...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GGGCCAGAACTGTGTTGCTTTCGGAGTAGAGTGGTGGGGAAAATATGGAATGAGTTTTCGCACATTCACTaGGTCCTCCACTCGCTTCAG +
Preference number: 5 (lower is better)
Translates to: GPELCCFRSRVVGKIWNEFSHIH*VLHSLQ
Trigger: CTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAAA...CTCATTCCATATTTTCCCCACCACTCTACTCCGAAAGCAACACAGTTCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp GCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGACTGGACCTAACCCTAGTTaGATACTGGGCCAGAACTGT +
Preference number: 5 (lower is better)
Translates to: AGVDWSCVNLVWEYCQKTGPNPS*ILGQNC
Trigger: ACAGTTCTGGCCCAGTATCAAACTAGGGTTAGGTCC...AGTCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAATTTCCTCCCTGAGCTaGTTTGTCCAAGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTISSLS*FVQATK
Trigger: CTTGGTGGCTTGGACAAACAAGCTCAGGGAGGAAAT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp CGTTGTTCTTCCTGTGCCTGTCCTCAATCAGCTGCACCTTCTCCTTaGTCTTGTCTGAGTATAGGTTTCCCTCAGCTACCAGCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: RCSSCACPQSAAPSP*SCLSIGFPQLPACF
Trigger: GAAACAAGCTGGTAGCTGAGGGAAACCTATACTCAGACAAGATCAAGGAGAAGGTGCAGCTGATTGAGGACAGGCACAGGAAGAACAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 90 bp AAGACACCCCTTAAGATGCCCAGTCATCACTCTGCAGTTAACCTGTaGGAATGTAGCCAGCTGCATGCTAAGGAGGGAAAGAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: KTPLKMPSHHSAVNL*ECSQLHAKEGKKAK
Trigger: CTTTGCTTTCTTTCCCTCCTTAGCATGCAGCTGGCTACATTCCCACAGGTTAACTGCAGAGTGATGACTGGGCATCTTAAGGGGTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATAGCACACAGTACAGGTaGTTCCAGGACCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHSTQYR*FQDLLE
Trigger: TTCCAACAGGTCCTGGAACAACCTGTACTGTGTGCT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CCCTCCAAAGTCCCAGCTGCAGACAGGATGCAATTGAGCATTTGGCTTTGGGATACCTGCTACTTCTTTTaGGGGAAGAAGCTGAATCTC +
Preference number: 5 (lower is better)
Translates to: PSKVPAADRMQLSIWLWDTCYFF*GKKLNL
Trigger: GAGATTCAGCTTCTTCCCCAAAAAGAAGTAGCAGGT...ATCCCAAAGCCAAATGCTCAATTGCATCCTGTCTGCAGCTGGGACTTTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGAAGTCACCTCACTGCCTaGGTTTCCCCAGATACAGAA +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSHLTA*VSPDTE
Trigger: TTCTGTATCTGGGGAAACCAAGGCAGTGAGGTGACT...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACACAAAGGCCTACTTTATaGCTAGGTGAGTGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTQRPTL*LGECSH
Trigger: GTGACTGCACTCACCTAGCAATAAAGTAGGCCTTTG...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS TCA 90 bp GGAGGATGTGGGCCCCATGTTGGACATCAGATCGAAGCTTTAAACTaGAACAACTGGGCAGACTTTTTATCCACTGAAAGTGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: GGCGPHVGHQIEALN*NNWADFLSTESDQG
Trigger: ACCCTGGTCACTTTCAGTGGATAAAAAGTCTGCCCAGTTGTTTCAGTTTAAAGCTTCGATCTGATGTCCAACATGGGGCCCACATCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS-3UTR CAA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTGCCTCATGCTTCTTCTaGGCGGCCTCCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFASCFF*AASTAA
Trigger: GGCAGCTGTGGAGGCCGCCAAGAAGAAGCATGAGGC...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATCAGCTTCCATCAACTaGTGCTTCTGTAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRSASIN*CFCSRS
Trigger: AGACCTGCTACAGAAGCACAAGTTGATGGAAGCTGA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCCACTAGAGCCCTTCCTTTCTCGGGTCTGTGGAGTTGCTTGCTGGAAATGCCTCTTCTTCATGAACAGTaGCACAGTTTGCAGATTAGT +
Preference number: 5 (lower is better)
Translates to: STRALPFSGLWSCLLEMPLLHEQ*HSLQIS
Trigger: ACTAATCTGCAAACTGTGCAACTGTTCATGAAGAAG...AGGCATTTCCAGCAAGCAACTCCACAGACCCGAGAAAGGAAGGGCTCTAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp TCATATGTACCAAAGCCAAATGAAGACCTTGCTCACCAGGGCGGGAACCTGGGGCTTCTTCATGAACAGTaGCACAGTTTGCAGATTAGT +
Preference number: 5 (lower is better)
Translates to: SYVPKPNEDLAHQGGNLGLLHEQ*HSLQIS
Trigger: ACTAATCTGCAAACTGTGCAACTGTTCATGAAGAAG...CCCCAGGTTCCCGCCCTGGTGAGCAAGGTCTTCATTTGGCTTTGGTACATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATGCTGGTGTGGACTGGAGCTGTGTCAACCTCGTTTGGGAATACTGTCAAAAGATATGTCTGTTGGATATaGCTGGTTTGGCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: MLVWTGAVSTSFGNTVKRYVCWI*LVWLPL
Trigger: CAGTGGCAGCCAAACCAGCAATATCCAACAGACATA...TCTTTTGACAGTATTCCCAAACGAGGTTGACACAGCTCCAGTCCACACCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACAATTGAGCATTTGGCTTaGGGATGCTTTACTGCAGGT +
Preference number: 5 (lower is better)
Translates to: HLSQLCRSSCHMGGDTKTIEHLA*GCFTAG
Trigger: ACCTGCAGTAAAGCATCCCAAAGCCAAATGCTCAAT...TGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp CAGGGTCTCCCAAAGCTGGATGCCTGCATTTTCAGTCTAGTTGGTCGAATGTCTCTGTGTCAACCTCGTTaGGGAATACTGTCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: QGLPKLDACIFSLVGRMSLCQPR*GILSKD
Trigger: GTCTTTTGACAGTATTCCCAAACGAGGTTGACACAG...AGACATTCGACCAACTAGACTGAAAATGCAGGCATCCAGCTTTGGGAGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTTGTCCCAGTTGTGCAGGAGTAGCTGTCACATGGGTGGTGATACCAAGACATACCTTCTCCTTGATCTaGTCTGAGTATAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: ICPSCAGVAVTWVVIPRHTFSLI*SEYRFP
Trigger: GGGAAACCTATACTCAGACAAGATCAAGGAGAAGGT...ATGTCTTGGTATCACCACCCATGTGACAGCTACTCCTGCACAACTGGGACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389722.7
ENST00000644917.1
CDS-3UTR CAA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTCGTCGGTCTCCCGCTaGAGCTGGAACAGGTGGTAC +
Preference number: 5 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFSSVSR*SWNRWY
Trigger: GTACCACCTGTTCCAGCTCAAGCGGGAGACCGACGA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCGCAGTATATTGTCCTaGCGGGCCGTGATGCGCTTC +
Preference number: 5 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFRSILS*RAVMRF
Trigger: GAAGCGCATCACGGCCCGCAAGGACAATATACTGCG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTTACATGTTCTCCAGCTaGCGCTTGCGCTCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFYMFSS*RLRSSA
Trigger: GGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGTA...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS-3UTR CAA 90 bp ATTACATTAGGTAAAACAAAACTAATAACGTCATGTCACTGGGCTGGCCTGTTTCACGTGGTCAAAGTCTaGCCCCATTTCCGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: ITLGKTKLITSCHWAGLFHVVKV*PHFRGR
Trigger: TCTTCCCCGGAAATGGGGCAAGACTTTGACCACGTG...AAACAGGCCAGCCCAGTGACATGACGTTATTAGTTTTGTTTTACCTAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS GCA 90 bp CCTGGTGACAACAAAGCTAATAGGTATAGGAGGCAGTTCGGAATATaGACTCCCAAAATGGACAGACCTGAGCTTTTATCCCATCTTTAT +
Preference number: 5 (lower is better)
Translates to: PGDNKANRYRRQFGI*TPKMDRPELLSHLY
Trigger: ATAAAGATGGGATAAAAGCTCAGGTCTGTCCATTTTGGGAGTGCATATTCCGAACTGCCTCCTATACCTATTAGCTTTGTTGTCACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 90 bp TCATTTAAAGAAAGGGTTATGTGGCTGGGAAAGTTTGGAAACCACTaGCTTAGTCTAATGCTTTCGATCTATAATGAGAAAACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SFKERVMWLGKFGNH*LSLMLSIYNEKTSA
Trigger: AGCACTGGTTTTCTCATTATAGATCGAAAGCATTAGACTAAGTCAGTGGTTTCCAAACTTTCCCAGCCACATAACCCTTTCTTTAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp TGGGTCCGGCGCCCGGCACAGGCATCGAGCAGCGCCTaGCACGCGGCAGACACCTCCTGCTCCTTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: WVRRPAQASSSA*HAADTSCSLFW
Trigger: CCAGAACAAGGAGCAGGAGGTGTCTGCCGCGTGGCAGGCGCTGCTCGATGCCTGTGCCGGGCGCCGGACCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS TCA 72 bp CAGACAGCAGGCCCTGGGCCCGGCTGGCCAGCTGCTTaGTGTTCCGGCCGTAGTCCTCCACCGCACGCTGCT +
Preference number: 6 (lower is better)
Translates to: QTAGPGPGWPAA*CSGRSPPPHAA
Trigger: AGCAGCGTGCGGTGGAGGACTACGGCCGGAACATCAAGCAGCTGGCCAGCCGGGCCCAGGGCCTGCTGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp ACACCCAGCAGGTGGAGCTCCCGCTCGAAGGCTGTGTaGACCCGGTGGAAGGACTCGGCCGTGCTGGCGTCC +
Preference number: 6 (lower is better)
Translates to: TPSRWSSRSKAV*TRWKDSAVLAS
Trigger: GGACGCCAGCACGGCCGAGTCCTTCCACCGGGTGCACACAGCCTTCGAGCGGGAGCTCCACCTGCTGGGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp GGCAGGGGCAGGCTCTGCGCCTTGACGCGGATGCTCTaGGACTCGTTGATGGCGGTGCTCACGCCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GRGRLCALTRML*DSLMAVLTPCS
Trigger: GCTGCAGGGCGTGAGCACCGCCATCAACGAGTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCTGCCCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342835.9
ENST00000389722.7
ENST00000553938.5
ENST00000556227.1
ENST00000644917.1
CDS CCA 72 bp GAGGGCGGGGCTGCGCCAGCTCATCTCGCCTCCACCTaGGCTGAGCCTAGTAGGGGTGAGAGGGCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: EGGAAPAHLAST*AEPSRGERALA
Trigger: AGCCAGAGCCCTCTCACCCCTACTAGGCTCAGCCCAGGTGGAGGCGAGATGAGCTGGCGCAGCCCCGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS CAA 72 bp CCTCTGCTGACGCAGGTCCGCCTGGGCCACCACCTGTaGGTAGAGCTCCCGCAGGGCCTGCAGCCGATGGGT +
Preference number: 6 (lower is better)
Translates to: PLLTQVRLGHHL*VELPQGLQPMG
Trigger: ACCCATCGGCTGCAGGCCCTGCGGGAGCTCTACCAACAGGTGGTGGCCCAGGCGGACCTGCGTCAGCAGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp GGCAGGGGCAGGCTCTGCGCCTTGACGCGGATGCTCTGGGACTCGTaGATGGCGGTGCTCACGCCCTGCAGCCAGGACAGCATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GRGRLCALTRMLWDS*MAVLTPCSQDSISS
Trigger: GGAGGAGATGCTGTCCTGGCTGCAGGGCGTGAGCACCGCCATCAACGAGTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCTGCCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342835.9
ENST00000389722.7
ENST00000553938.5
ENST00000556227.1
ENST00000644917.1
CDS CCA 72 bp GGGACTCACGCTCCAGGGCATCCACACGGGCCTGGATaGCGGCCACGTCACGCTCCAGCCCTGACAACTTCC +
Preference number: 6 (lower is better)
Translates to: GTHAPGHPHGPG*RPRHAPALTTS
Trigger: GGAAGTTGTCAGGGCTGGAGCGTGACGTGGCCGCCATCCAGGCCCGTGTGGATGCCCTGGAGCGTGAGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp TGCTGGGACTCACGCTCCAGGGCATCCACACGGGCCTaGATGGCGGCCACGTCACGCTCCAGCCCTGACAAC +
Preference number: 6 (lower is better)
Translates to: CWDSRSRASTRA*MAATSRSSPDN
Trigger: GTTGTCAGGGCTGGAGCGTGACGTGGCCGCCATCCAGGCCCGTGTGGATGCCCTGGAGCGTGAGTCCCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp GCACACTCTGCCCATGGTCCCGCGGGGCCGGCAGCGTaGCGGGCTCATCACCCTCGCTCAGAGGCGTATCTA +
Preference number: 6 (lower is better)
Translates to: AHSAHGPAGPAA*RAHHPRSEAYL
Trigger: TAGATACGCCTCTGAGCGAGGGTGATGAGCCCGCAACGCTGCCGGCCCCGCGGGACCATGGGCAGAGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342835.9
ENST00000389722.7
ENST00000553938.5
ENST00000556227.1
ENST00000644917.1
CDS CAA 90 bp TTCCTGCAGCCTCTGCTGACGCAGGTCCGCCTGGGCCACCACCTGTaGGTAGAGCTCCCGCAGGGCCTGCAGCCGATGGGTCACATCTGG +
Preference number: 6 (lower is better)
Translates to: FLQPLLTQVRLGHHL*VELPQGLQPMGHIW
Trigger: CCAGATGTGACCCATCGGCTGCAGGCCCTGCGGGAGCTCTACCAACAGGTGGTGGCCCAGGCGGACCTGCGTCAGCAGAGGCTGCAGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp GCGGCCACGTCACGCTCCAGCCCTGACAACTTCCTCTaGATGGCGATGATACCTGCCAGGTCCCGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: AATSRSSPDNFL*MAMIPARSRPR
Trigger: CCTGGGGCGGGACCTGGCAGGTATCATCGCCATCCAGAGGAAGTTGTCAGGGCTGGAGCGTGACGTGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp CCTCGTCTGCATCCAGGTAGTACTGCTGTGCCTCGTTaGCGTCCCTCAGTCGCTGCAGCCTCCCGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: PRLHPGSTAVPR*RPSVAAASRPL
Trigger: CAGCGGCCGGGAGGCTGCAGCGACTGAGGGACGCCAACGAGGCACAGCAGTACTACCTGGATGCAGACGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp GATTGGGGCAGCAGCGGGCGGCCTCCCATTGCCAGGTaGGGCAAGAATGGGTGGGTCTCCTCCGTGCCAAGT +
Preference number: 6 (lower is better)
Translates to: DWGSSGRPPIAR*GKNGWVSSVPS
Trigger: ACTTGGCACGGAGGAGACCCACCCATTCTTGCCCCACCTGGCAATGGGAGGCCGCCCGCTGCTGCCCCAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp AGGCTCTGCGCCTTGACGCGGATGCTCTGGGACTCGTaGATGGCGGTGCTCACGCCCTGCAGCCAGGACAGC +
Preference number: 6 (lower is better)
Translates to: RLCALTRMLWDS*MAVLTPCSQDS
Trigger: GCTGTCCTGGCTGCAGGGCGTGAGCACCGCCATCAACGAGTCCCAGAGCATCCGCGTCAAGGCGCAGAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342835.9
ENST00000389722.7
ENST00000553938.5
ENST00000556227.1
ENST00000644917.1
CDS TCA 72 bp CCACGTCCTCGGGCAGCTCGCGGTGCTTCTCGTCGATaGGGCCCAGGATCTCGGCACCCGTGTAGAAGTAGC +
Preference number: 6 (lower is better)
Translates to: PRPRAARGASRR*GPGSRHPCRSS
Trigger: GCTACTTCTACACGGGTGCCGAGATCCTGGGCCTCATCGACGAGAAGCACCGCGAGCTGCCCGAGGACGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp TGCAAGCGCAGGTCGGAGCTCCTGGCAGCCGAGAGGTaGTGGGTCTTCTCCTTTGTGGTGGCCTGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: CKRRSELLAAER*WVFSFVVACSS
Trigger: CGAGCTGCAGGCCACCACAAAGGAGAAGACCCAGCACCTCTCGGCTGCCAGGAGCTCCGACCTGCGCTTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp GGCCTCAGCCTCGTCTGCATCCAGGTAGTACTGCTGTaGCTCGTTGGCGTCCCTCAGTCGCTGCAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: GLSLVCIQVVLL*LVGVPQSLQPP
Trigger: GGGAGGCTGCAGCGACTGAGGGACGCCAACGAGGCACAGCAGTACTACCTGGATGCAGACGAGGCTGAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp CGCTCGATGAAGGCATTCACATTGTCCACCCGCTCCTaGCCAATCGCCCCGGTCTCCCGGGCAAAGTCCCGG +
Preference number: 6 (lower is better)
Translates to: RSMKAFTLSTRS*PIAPVSRAKSR
Trigger: CCGGGACTTTGCCCGGGAGACCGGGGCGATTGGGCAGGAGCGGGTGGACAATGTGAATGCCTTCATCGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp TGCAGTTTCTCGCGGATCTCCTCTGAGGCCTGGTGCTaGCGCTGCAGCAGGGACTCGCCAAGCTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: CSFSRISSEAWC*RCSRDSPSSRQ
Trigger: CTGCCTGGAGCTTGGCGAGTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGAGATCCGCGAGAAACTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp TGCTGCAGTTTCTCGCGGATCTCCTCTGAGGCCTGGTaGTGCCGCTGCAGCAGGGACTCGCCAAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: CCSFSRISSEAW*CRCSRDSPSSR
Trigger: CCTGGAGCTTGGCGAGTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGAGATCCGCGAGAAACTGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp CTCGGTGGCCGCATGGTGGGAAACTGGAGCCTCCCCTaGTGTCTCGCCTTCCTCCTCTTGAGGCCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: LGGRMVGNWSLP*CLAFLLLRPSL
Trigger: GAGACTGGGCCTCAAGAGGAGGAAGGCGAGACAGCAGGGGAGGCTCCAGTTTCCCACCATGCGGCCACCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp GCAGCATGTCCTGGAAGAGCTTCTGCAGTGCCAGGGTaGTCTCGAGCCTCTGGCGCCGGGACTGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: AACPGRASAVPG*SRASGAGTAAA
Trigger: AGCTGCTGCAGTCCCGGCGCCAGAGGCTCGAGACCACCCTGGCACTGCAGAAGCTCTTCCAGGACATGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp GAGCTCCCGCAGGGCCTGCAGCCGATGGGTCACATCTaGGGAATCCCGAAACTCTTCGGGGAATCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: ELPQGLQPMGHI*GIPKLFGESLG
Trigger: GCCCAGGGATTCCCCGAAGAGTTTCGGGATTCCCCAGATGTGACCCATCGGCTGCAGGCCCTGCGGGAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp AAGCGCAGGTCGGAGCTCCTGGCAGCCGAGAGGTGCTaGGTCTTCTCCTTTGTGGTGGCCTGCAGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: KRRSELLAAERC*VFSFVVACSSS
Trigger: GGACGAGCTGCAGGCCACCACAAAGGAGAAGACCCAGCACCTCTCGGCTGCCAGGAGCTCCGACCTGCGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp AGACTGACCGGGGACGTTCTCTCGGTGGCCGCATGGTaGGAAACTGGAGCCTCCCCTGCTGTCTCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: RLTGDVLSVAAW*ETGASPAVSPS
Trigger: GGAAGGCGAGACAGCAGGGGAGGCTCCAGTTTCCCACCATGCGGCCACCGAGAGAACGTCCCCGGTCAGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS CCA 72 bp CAGAGACTGACCGGGGACGTTCTCTCGGTGGCCGCATaGTGGGAAACTGGAGCCTCCCCTGCTGTCTCGCCT +
Preference number: 6 (lower is better)
Translates to: QRLTGDVLSVAA*WETGASPAVSP
Trigger: AGGCGAGACAGCAGGGGAGGCTCCAGTTTCCCACCATGCGGCCACCGAGAGAACGTCCCCGGTCAGTCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS CAA 90 bp CCCGGGTCGTCTGACCGCAGCTGGTCCTCCATGGCGCTGATCCACTaGTTGAGGTCAGCATGGGTCTGCAAGCGCAGGTCGGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: PGSSDRSWSSMALIH*LRSAWVCKRRSELL
Trigger: CAGGAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCTCAACAAGTGGATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGACCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS TCA 72 bp CTCGCAATCTACGCAGTAGTTGTGCACTCGGAGGGCTaGGTCCACAGCCTCCCGCCGCTCCGACACCAGGGT +
Preference number: 6 (lower is better)
Translates to: LAIYAVVVHSEG*VHSLPPLRHQG
Trigger: ACCCTGGTGTCGGAGCGGCGGGAGGCTGTGGACTCAGCCCTCCGAGTGCACAACTACTGCGTAGATTGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 72 bp ACGGGCCTGGATGGCGGCCACGTCACGCTCCAGCCCTaGCAACTTCCTCTGGATGGCGATGATACCTGCCAG +
Preference number: 6 (lower is better)
Translates to: TGLDGGHVTLQP*QLPLDGDDTCQ
Trigger: CTGGCAGGTATCATCGCCATCCAGAGGAAGTTGTCAGGGCTGGAGCGTGACGTGGCCGCCATCCAGGCCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp GATGCTGTGCAGCATGTCCTGGAAGAGCTTCTGCAGTaGCAGGGTGGTCTCGAGCCTCTGGCGCCGGGACTG +
Preference number: 6 (lower is better)
Translates to: DAVQHVLEELLQ*QGGLEPLAPGL
Trigger: CAGTCCCGGCGCCAGAGGCTCGAGACCACCCTGGCACTGCAGAAGCTCTTCCAGGACATGCTGCACAGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp GCAGAAGGCAGCCAGGTCCTTCAGCTGGTCCCACTGTaGCGACACCTCCTTTATGCGGGCCTCGATCTGCGG +
Preference number: 6 (lower is better)
Translates to: AEGSQVLQLVPL*RHLLYAGLDLR
Trigger: CCGCAGATCGAGGCCCGCATAAAGGAGGTGTCGGCACAGTGGGACCAGCTGAAGGACCTGGCTGCCTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp CCCACATCTTCACCAGAGAGCAGCCGGTGGGCGTCTTaGAGCCAAGCCTTCAGGTCATCCGCATCGCCCTGG +
Preference number: 6 (lower is better)
Translates to: PTSSPESSRWAS*SQAFRSSASPW
Trigger: CCAGGGCGATGCGGATGACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCTGCTCTCTGGTGAAGATGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp GGTCAGCATGGGTCTGCAAGCGCAGGTCGGAGCTCCTaGCAGCCGAGAGGTGCTGGGTCTTCTCCTTTGTGG +
Preference number: 6 (lower is better)
Translates to: GQHGSASAGRSS*QPRGAGSSPLW
Trigger: CCACAAAGGAGAAGACCCAGCACCTCTCGGCTGCCAGGAGCTCCGACCTGCGCTTGCAGACCCATGCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 72 bp CCCCACATCTTCACCAGAGAGCAGCCGGTGGGCGTCTaGCAGCCAAGCCTTCAGGTCATCCGCATCGCCCTG +
Preference number: 6 (lower is better)
Translates to: PHIFTREQPVGV*QPSLQVIRIAL
Trigger: CAGGGCGATGCGGATGACCTGAAGGCTTGGCTGCAAGACGCCCACCGGCTGCTCTCTGGTGAAGATGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp TCGGGGTCGAGGAGCGGGATGATGCCCAGCTGGCGCTCAGCCACATaGAATGCGTGCTCCAGGTTGTGCCGGGCATTGGAGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SGSRSGMMPSWRSAT*NACSRLCRALESFS
Trigger: GCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCCGCTCCTCGACCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp GGGTCGTCTGACCGCAGCTGGTCCTCCATGGCGCTGATCCACTTGTaGAGGTCAGCATGGGTCTGCAAGCGCAGGTCGGAGCTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GSSDRSWSSMALIHL*RSAWVCKRRSELLA
Trigger: TGCCAGGAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCTCAACAAGTGGATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 90 bp GCGCTCTTCCGCCACGTCCTTCAGCCCTGCGTAGTGCTTGTCCACTaGCCCCTGAAGTCTGATGATCTGTTCCCCCTCAGGGTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: ALFRHVLQPCVVLVH*PLKSDDLFPLRVAC
Trigger: GCAGGCCACCCTGAGGGGGAACAGATCATCAGACTTCAGGGGCAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTGGCGGAAGAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS TCA 72 bp CCGATTGACACTGGTCAGGTCCTTGCCCGGGTCGTCTaGCCGCAGCTGGTCCTCCATGGCGCTGATCCACTT +
Preference number: 6 (lower is better)
Translates to: PIDTGQVLARVV*PQLVLHGADPL
Trigger: AAGTGGATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGACCCGGGCAAGGACCTGACCAGTGTCAATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp CACTGTGCCGACACCTCCTTTATGCGGGCCTCGATCTaGGGGTGCCCAAACTGCTTGCGCGCAACCATGCCA +
Preference number: 6 (lower is better)
Translates to: HCADTSFMRASI*GCPNCLRATMP
Trigger: TGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCATAAAGGAGGTGTCGGCACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp CCTTCAGCTGGTCCCACTGTGCCGACACCTCCTTTATaGGGGCCTCGATCTGCGGGTGCCCAAACTGCTTGC +
Preference number: 6 (lower is better)
Translates to: PSAGPTVPTPPL*GPRSAGAQTAC
Trigger: GCAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCATAAAGGAGGTGTCGGCACAGTGGGACCAGCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp CACTGCTCCAAGTGGCTGATGCGGTCCTGGATGACCTaGGGGTCACAAGGCTGGTACCCTTTCCCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: HCSKWLMRSWMT*GSQGWYPFPSV
Trigger: CACCGAGGGGAAAGGGTACCAGCCTTGTGACCCCCAGGTCATCCAGGACCGCATCAGCCACTTGGAGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp CAGGCCCTCCAGCCGCTGGCCCAGAAGCAGATACTCTaGGTCCGTCTGGCCTTGGATCACTTTCTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: QALQPLAQKQIL*VRLALDHFLPR
Trigger: TCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTGGGCCAGCGGCTGGAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp TCCTCCATGGCGCTGATCCACTTGTTGAGGTCAGCATaGGTCTGCAAGCGCAGGTCGGAGCTCCTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SSMALIHLLRSA*VCKRRSELLAA
Trigger: GGCTGCCAGGAGCTCCGACCTGCGCTTGCAGACCCATGCTGACCTCAACAAGTGGATCAGCGCCATGGAGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp CTGGTCAGGTCCTTGCCCGGGTCGTCTGACCGCAGCTaGTCCTCCATGGCGCTGATCCACTTGTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: LVRSLPGSSDRS*SSMALIHLLRS
Trigger: TGACCTCAACAAGTGGATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGACCCGGGCAAGGACCTGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp TCTCCACACTGTCCACTGTGTGTCCAAAGTCCCCGCTaGCCAGGTAGGGCTCCTGGGCAATCAGCCACGCCT +
Preference number: 6 (lower is better)
Translates to: SPHCPLCVQSPR*PGRAPGQSATP
Trigger: AGGCGTGGCTGATTGCCCAGGAGCCCTACCTGGCCAGCGGGGACTTTGGACACACAGTGGACAGTGTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000542694.2
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp TCCGTGCCAAGTGAGCACCAAGGAAGGCAGCCTCACTaGAGCCATCTGGCCAGGACCCGGTCCCAAAGACCT +
Preference number: 6 (lower is better)
Translates to: SVPSEHQGRQPH*SHLARTRSQRP
Trigger: AGGTCTTTGGGACCGGGTCCTGGCCAGATGGCTCCAGTGAGGCTGCCTTCCTTGGTGCTCACTTGGCACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp CCTGGCCCCTGCCCAAGTCAAGGGAGGGGCCTCCAATaGTGCCACTCACTGTATGACATACAGGTGCCCACG +
Preference number: 6 (lower is better)
Translates to: PGPCPSQGRGLQ*CHSLYDIQVPT
Trigger: CGTGGGCACCTGTATGTCATACAGTGAGTGGCACCATTGGAGGCCCCTCCCTTGACTTGGGCAGGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp AGGAGCGGGATGATGCCCAGCTGGCGCTCAGCCACATaGAATGCGTGCTCCAGGTTGTGCCGGGCATTGGAG +
Preference number: 6 (lower is better)
Translates to: RSGMMPSWRSAT*NACSRLCRALE
Trigger: CTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCCGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp GACCGCAGCTGGTCCTCCATGGCGCTGATCCACTTGTaGAGGTCAGCATGGGTCTGCAAGCGCAGGTCGGAG +
Preference number: 6 (lower is better)
Translates to: DRSWSSMALIHL*RSAWVCKRRSE
Trigger: CTCCGACCTGCGCTTGCAGACCCATGCTGACCTCAACAAGTGGATCAGCGCCATGGAGGACCAGCTGCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 90 bp TCCTGGCCCACCCTGGCTCTCCCACAACCTGCTATGGGTGCCCCCTaGCTTCTCTACTCTGCCTGTGCTTCTGGCTCCATTTCCACCCCA +
Preference number: 6 (lower is better)
Translates to: SWPTLALPQPAMGAP*LLYSACASGSISTP
Trigger: TGGGGTGGAAATGGAGCCAGAAGCACAGGCAGAGTAGAGAAGCAAGGGGGCACCCATAGCAGGTTGTGGGAGAGCCAGGGTGGGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp GTGGGGCAAGAATGGGTGGGTCTCCTCCGTGCCAAGTaGGCACCAAGGAAGGCAGCCTCACTGGAGCCATCT +
Preference number: 6 (lower is better)
Translates to: VGQEWVGLLRAK*APRKAASLEPS
Trigger: AGATGGCTCCAGTGAGGCTGCCTTCCTTGGTGCTCACTTGGCACGGAGGAGACCCACCCATTCTTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp CGGGATGATGCCCAGCTGGCGCTCAGCCACATTGAATaGGTGCTCCAGGTTGTGCCGGGCATTGGAGTCCTT +
Preference number: 6 (lower is better)
Translates to: RDDAQLALSHIE*VLQVVPGIGVL
Trigger: AAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp CGCCCAGCTGCCATGTTGCTCAGCTCCTCAAAGCACTaGTCCAAGTGGCTGATGCGGTCCTGGATGACCTGG +
Preference number: 6 (lower is better)
Translates to: RPAAMLLSSSKH*SKWLMRSWMTW
Trigger: CCAGGTCATCCAGGACCGCATCAGCCACTTGGAGCAGTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp CGATCTGCGGGTGCCCAAACTGCTTGCGCGCAACCATaGCATGAGCCTCCTGGAAGATCTGCTCCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: RSAGAQTACAQP*HEPPGRSAPGE
Trigger: CTCACCTGGAGCAGATCTTCCAGGAGGCTCATGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCAGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp AAGCGTGGTGGGCTTCTCCAGGGCAGCAAAGCGCTCTaGCCAGCTGGCCGTGGACTTCTCAAAAGCCTCATG +
Preference number: 6 (lower is better)
Translates to: KRGGLLQGSKAL*PAGRGLLKSLM
Trigger: CATGAGGCTTTTGAGAAGTCCACGGCCAGCTGGGCAGAGCGCTTTGCTGCCCTGGAGAAGCCCACCACGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000542694.2
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp AGTAGGTTCCAGAGGAGGGGACATGGGCTGCACTGCTaGTCCTGCTACCATCAGTGCTCTCCCTGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: SRFQRRGHGLHC*SCYHQCSPCPW
Trigger: CCAAGGGCAGGGAGAGCACTGATGGTAGCAGGAGCAGCAGTGCAGCCCATGTCCCCTCCTCTGGAACCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp AGCATTGGCCACAAGGATCTGGAGGCCCCAAAGCCCTaGCTGGATCACCGTAGCAGGGAGGAAGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: SIGHKDLEAPKP*LDHRSREEEQE
Trigger: CTCCTGCTCTTCCTCCCTGCTACGGTGATCCAGGCAGGGCTTTGGGGCCTCCAGATCCTTGTGGCCAATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp TTGCCAGGTGGGGCAAGAATGGGTGGGTCTCCTCCGTaGCAAGTGAGCACCAAGGAAGGCAGCCTCACTGGA +
Preference number: 6 (lower is better)
Translates to: LPGGARMGGSPP*QVSTKEGSLTG
Trigger: TCCAGTGAGGCTGCCTTCCTTGGTGCTCACTTGGCACGGAGGAGACCCACCCATTCTTGCCCCACCTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp ACATCTTCGGGGTCGAGGAGCGGGATGATGCCCAGCTaGCGCTCAGCCACATTGAATGCGTGCTCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: TSSGSRSGMMPS*RSATLNACSRL
Trigger: CAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCATCCCGCTCCTCGACCCCGAAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp TGGTCCTGGTACTGCTTCACCTCCCTGCTGCGTGGGTaGCCACTCTCTACCAAGCTGTTGGCAGCGAGGTTC +
Preference number: 6 (lower is better)
Translates to: WSWYCFTSLLRG*PLSTKLLAARF
Trigger: GAACCTCGCTGCCAACAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGTACCAGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp CCCCTCGTAAGGAGGCACAGCCTTGGGGAACTGCTGTaGTCTTTACCTCCCTGCACCTCCCTGTGGAGACCT +
Preference number: 6 (lower is better)
Translates to: PLVRRHSLGELL*SLPPCTSLWRP
Trigger: AGGTCTCCACAGGGAGGTGCAGGGAGGTAAAGACCACAGCAGTTCCCCAAGGCTGTGCCTCCTTACGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp AAGGCCTGCAGCTGCTGCTGGACGCCCGTCAGCGAGTaGGCAAACTTGCGGCTGTTCAGGACAGTGATGGTC +
Preference number: 6 (lower is better)
Translates to: KACSCCWTPVSE*ANLRLFRTVMV
Trigger: GACCATCACTGTCCTGAACAGCCGCAAGTTTGCCAACTCGCTGACGGGCGTCCAGCAGCAGCTGCAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp TCTGACCGCAGCTGGTCCTCCATGGCGCTGATCCACTaGTTGAGGTCAGCATGGGTCTGCAAGCGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: SDRSWSSMALIH*LRSAWVCKRRS
Trigger: CGACCTGCGCTTGCAGACCCATGCTGACCTCAACAAGTGGATCAGCGCCATGGAGGACCAGCTGCGGTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 90 bp AGTCGTTTGGACTGCTCCAGTTGGGCCTTCCGCCCAGCTGCCATGTaGCTCAGCTCCTCAAAGCACTGCTCCAAGTGGCTGATGCGGTCC +
Preference number: 6 (lower is better)
Translates to: SRLDCSSWAFRPAAM*LSSSKHCSKWLMRS
Trigger: GGACCGCATCAGCCACTTGGAGCAGTGCTTTGAGGAGCTGAGCAACATGGCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAAACGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp ACTCGCTTCAGCTTAGCCAACATCCGATTGACACTGGTCAGGTCCTaGCCCGGGTCGTCTGACCGCAGCTGGTCCTCCATGGCGCTGATC +
Preference number: 6 (lower is better)
Translates to: TRFSLANIRLTLVRS*PGSSDRSWSSMALI
Trigger: GATCAGCGCCATGGAGGACCAGCTGCGGTCAGACGACCCGGGCAAGGACCTGACCAGTGTCAATCGGATGTTGGCTAAGCTGAAGCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp ATGATGCCCAGCTGGCGCTCAGCCACATTGAATGCGTaGTCCAGGTTGTGCCGGGCATTGGAGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: MMPSWRSATLNA*SRLCRALESFS
Trigger: GCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp TTGGCAAACTTGCGGCTGTTCAGGACAGTGATGGTCTaGTCGATCCAGGTGAGCAGGTCCGAGGCTAGCCCG +
Preference number: 6 (lower is better)
Translates to: LANLRLFRTVMV*SIQVSRSEASP
Trigger: CGGGCTAGCCTCGGACCTGCTCACCTGGATCGAGCAGACCATCACTGTCCTGAACAGCCGCAAGTTTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp CTGGTACCCTTTCCCCTCGGTGAACTTCAGGGTGGCTaGGGTGATGGCCTTCACTTTGTCCCCTTGGATGGC +
Preference number: 6 (lower is better)
Translates to: LVPFPLGELQGG*GDGLHFVPLDG
Trigger: GCCATCCAAGGGGACAAAGTGAAGGCCATCACCGCAGCCACCCTGAAGTTCACCGAGGGGAAAGGGTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp TTATGCGGGCCTCGATCTGCGGGTGCCCAAACTGCTTaGGCGCAACCATGCCATGAGCCTCCTGGAAGATCT +
Preference number: 6 (lower is better)
Translates to: LCGPRSAGAQTA*AQPCHEPPGRS
Trigger: AGATCTTCCAGGAGGCTCATGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp AATGCCTGCCACCTGGTGTTCAGATGGTCCTGGTACTaGTTCACCTCCCTGCTGCGTGGGTGGCCACTCTCT +
Preference number: 6 (lower is better)
Translates to: NACHLVFRWSWY*FTSLLRGWPLS
Trigger: AGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCTGAACACCAGGTGGCAGGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp CTTGCGCTTGCGCTCTTCCGCCACGTCCTTCAGCCCTaGGTAGTGCTTGTCCACTTGCCCCTGAAGTCTGAT +
Preference number: 6 (lower is better)
Translates to: LALALFRHVLQP*VVLVHLPLKSD
Trigger: ATCAGACTTCAGGGGCAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTGGCGGAAGAGCGCAAGCGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp GCTGGAACAGGTGGTACATGTTCTCCAGCTTGCGCTTaGGCTCTTCCGCCACGTCCTTCAGCCCTGCGTAGT +
Preference number: 6 (lower is better)
Translates to: AGTGGTCSPACA*ALPPRPSALRS
Trigger: ACTACGCAGGGCTGAAGGACGTGGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGTACCACCTGTTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp GTGAGCACCAAGGAAGGCAGCCTCACTGGAGCCATCTaGCCAGGACCCGGTCCCAAAGACCTGACTGCTAAA +
Preference number: 6 (lower is better)
Translates to: VSTKEGSLTGAI*PGPGPKDLTAK
Trigger: TTTAGCAGTCAGGTCTTTGGGACCGGGTCCTGGCCAGATGGCTCCAGTGAGGCTGCCTTCCTTGGTGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp CGCCACGTCCTTCAGCCCTGCGTAGTGCTTGTCCACTaGCCCCTGAAGTCTGATGATCTGTTCCCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: RHVLQPCVVLVH*PLKSDDLFPLR
Trigger: CCTGAGGGGGAACAGATCATCAGACTTCAGGGGCAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 72 bp CGCTTGAGCTGGAACAGGTGGTACATGTTCTCCAGCTaGCGCTTGCGCTCTTCCGCCACGTCCTTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RLSWNRWYMFSS*RLRSSATSFSP
Trigger: AGGGCTGAAGGACGTGGCGGAAGAGCGCAAGCGCAAGCTGGAGAACATGTACCACCTGTTCCAGCTCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 90 bp TGGCGCTCAGCCACATTGAATGCGTGCTCCAGGTTGTGCCGGGCATaGGAGTCCTTCAGCTTATCAAAGTCGATCAGGTCGGGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: WRSATLNACSRLCRA*ESFSLSKSIRSGRC
Trigger: GCACCGGCCCGACCTGATCGACTTTGATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp CTCCAGCCGCTGGCCCAGAAGCAGATACTCTGGGTCCGTCTGGCCTaGGATCACTTTCTCCCCAGACTCCTTAACACGCTGGTAGCTGTC +
Preference number: 6 (lower is better)
Translates to: LQPLAQKQILWVRLA*DHFLPRLLNTLVAV
Trigger: GACAGCTACCAGCGTGTTAAGGAGTCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTGGGCCAGCGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 72 bp TATCCAGCTCGTCGTCTGGGGCGTCCCAGCGGGCATTaGTCCTGCTGTAAGGTGGCTGGTTGCCCACATTTT +
Preference number: 6 (lower is better)
Translates to: YPARRLGRPSGH*SCCKVAGCPHF
Trigger: AAAATGTGGGCAACCAGCCACCTTACAGCAGGATCAATGCCCGCTGGGACGCCCCAGACGACGAGCTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 72 bp GCATCTGGCAGCCTTTGGACCCTAGAGTGTCTGCAATaGGCCAGCATTGGCCACAAGGATCTGGAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: ASGSLWTLECLQ*ASIGHKDLEAP
Trigger: TGGGGCCTCCAGATCCTTGTGGCCAATGCTGGCTCATTGCAGACACTCTAGGGTCCAAAGGCTGCCAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp GCAAGAGGTAGGAAGGCCCCCAAGCAGCTGGATGCCTaGAGCACCAAGGACATCTTCAGCCAGGAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: ARGRKAPKQLDA*STKDIFSQEVR
Trigger: TCTGACCTCCTGGCTGAAGATGTCCTTGGTGCTTCAGGCATCCAGCTGCTTGGGGGCCTTCCTACCTCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp TGGTGTTCAGATGGTCCTGGTACTGCTTCACCTCCCTaGTGCGTGGGTGGCCACTCTCTACCAAGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: WCSDGPGTASPP*CVGGHSLPSCW
Trigger: CCAACAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCTGAACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp ACTGGAAGCCTGGGCTTGGGGTCTTTCTGTGGATCCTaGGCTCTGACTTGGGTATACATCTGGGGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: TGSLGLGSFCGS*ALTWVYIWGGP
Trigger: AGGGCCTCCCCAGATGTATACCCAAGTCAGAGCGCAGGATCCACAGAAAGACCCCAAGCCCAGGCTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp AAACTAAGGGTACCAGGTCCTAAGTCTGCCCGCCCCTaGCACCTTACAAAGGGAGAACCCAGACCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: KLRVPGPKSARP*HLTKGEPRPSL
Trigger: CAGGGAGGGTCTGGGTTCTCCCTTTGTAAGGTGGCAGGGGCGGGCAGACTTAGGACCTGGTACCCTTAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp CCCTGGCTCTCCCACAACCTGCTATGGGTGCCCCCTTaGTTCTCTACTCTGCCTGTGCTTCTGGCTCCATTT +
Preference number: 6 (lower is better)
Translates to: PWLSHNLLWVPP*FSTLPVLLAPF
Trigger: AAATGGAGCCAGAAGCACAGGCAGAGTAGAGAAGCAAGGGGGCACCCATAGCAGGTTGTGGGAGAGCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp TGGGGCGTCCCAGCGGGCATTGATCCTGCTGTAAGGTaGCTGGTTGCCCACATTTTCAAACTCTGTGGCCGA +
Preference number: 6 (lower is better)
Translates to: WGVPAGIDPAVR*LVAHIFKLCGR
Trigger: TCGGCCACAGAGTTTGAAAATGTGGGCAACCAGCCACCTTACAGCAGGATCAATGCCCGCTGGGACGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp GGATGGGACTGGAAGCCTGGGCTTGGGGTCTTTCTGTaGATCCTGCGCTCTGACTTGGGTATACATCTGGGG +
Preference number: 6 (lower is better)
Translates to: GWDWKPGLGVFL*ILRSDLGIHLG
Trigger: CCCCAGATGTATACCCAAGTCAGAGCGCAGGATCCACAGAAAGACCCCAAGCCCAGGCTTCCAGTCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp TGGTCCTCCACTCGCTTCAGCTTAGCCAACATCCGATaGACACTGGTCAGGTCCTTGCCCGGGTCGTCTGAC +
Preference number: 6 (lower is better)
Translates to: WSSTRFSLANIR*TLVRSLPGSSD
Trigger: GTCAGACGACCCGGGCAAGGACCTGACCAGTGTCAATCGGATGTTGGCTAAGCTGAAGCGAGTGGAGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 72 bp GTCTCCCTCCTCTCCTCTCCCTCTTCTCCCTTACTGTaGGAAGCCTTCTTGTTGGGCCCCTCCAGGTCATGC +
Preference number: 6 (lower is better)
Translates to: VSLLSSPSSPLL*EAFLLGPSRSC
Trigger: GCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCAACAGTAAGGGAGAAGAGGGAGAGGAGAGGAGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS CAA 72 bp ACCCTGGCTCTCCCACAACCTGCTATGGGTGCCCCCTaGCTTCTCTACTCTGCCTGTGCTTCTGGCTCCATT +
Preference number: 6 (lower is better)
Translates to: TLALPQPAMGAP*LLYSACASGSI
Trigger: AATGGAGCCAGAAGCACAGGCAGAGTAGAGAAGCAAGGGGGCACCCATAGCAGGTTGTGGGAGAGCCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 90 bp TCGCCCTGGAACTGGAAAAAGTTCTCAGCATCCTGGAGGTTCTTCTaGCAGAAGGCAGCCAGGTCCTTCAGCTGGTCCCACTGTGCCGAC +
Preference number: 6 (lower is better)
Translates to: SPWNWKKFSASWRFF*QKAARSFSWSHCAD
Trigger: GTCGGCACAGTGGGACCAGCTGAAGGACCTGGCTGCCTTCTGCAAGAAGAACCTCCAGGATGCTGAGAACTTTTTCCAGTTCCAGGGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 72 bp TGCTCTCCATCCAGGAGAGGAGGTCACGGGCCATGCTaGAGAAGCGGAATTTATCCGCCGTGTCCACTAGCT +
Preference number: 6 (lower is better)
Translates to: CSPSRRGGHGPC*RSGIYPPCPLA
Trigger: AGCTAGTGGACACGGCGGATAAATTCCGCTTCTTCAGCATGGCCCGTGACCTCCTCTCCTGGATGGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS TCA 72 bp CTGAGCCTAGTAGGGGTGAGAGGGCTCTGGCTGCAGTaGCTCCCAGGAACTAGACAAACGAGACCAGAGACT +
Preference number: 6 (lower is better)
Translates to: LSLVGVRGLWLQ*LPGTRQTRPET
Trigger: AGTCTCTGGTCTCGTTTGTCTAGTTCCTGGGAGTCACTGCAGCCAGAGCCCTCTCACCCCTACTAGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389720.4
CDS TCA 72 bp CTGGAGCCATCTGGCCAGGACCCGGTCCCAAAGACCTaGCTGCTAAACACCTTTCAGCAAGAGGTAGGAAGG +
Preference number: 6 (lower is better)
Translates to: LEPSGQDPVPKT*LLNTFQQEVGR
Trigger: CCTTCCTACCTCTTGCTGAAAGGTGTTTAGCAGTCAGGTCTTTGGGACCGGGTCCTGGCCAGATGGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp CTGTATGACATACAGGTGCCCACGAGAAGGGGAAGCTaGCCTGCCATTCCCTGGCTGGGCATCTCCTTATGC +
Preference number: 6 (lower is better)
Translates to: LYDIQVPTRRGS*PAIPWLGISLC
Trigger: GCATAAGGAGATGCCCAGCCAGGGAATGGCAGGTCAGCTTCCCCTTCTCGTGGGCACCTGTATGTCATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp GCATCCAGCCCACGGAGCTCATCCTCAAAGGCCTTGTaGTTGCGCTGTAAGATGAGCACACTGGTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: ASSPRSSSSKAL*LRCKMSTLVRS
Trigger: AGACCTGACCAGTGTGCTCATCTTACAGCGCAAGCACAAGGCCTTTGAGGATGAGCTCCGTGGGCTGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp TCTCTGCTGCTACCTCACTCTTGCTGTGAATACTGCTaGTTCCCAGGCGGACCTGCTGGCTCCTCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: SLLLPHSCCEYC*FPGGPAGSSLG
Trigger: TCCAAGAGAGGAGCCAGCAGGTCCGCCTGGGAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp GCCTCCAATGGTGCCACTCACTGTATGACATACAGGTaGCCACGAGAAGGGGAAGCTGACCTGCCATTCCCT +
Preference number: 6 (lower is better)
Translates to: ASNGATHCMTYR*PREGEADLPFP
Trigger: AGGGAATGGCAGGTCAGCTTCCCCTTCTCGTGGGCACCTGTATGTCATACAGTGAGTGGCACCATTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp CCCTGCTGCGTGGGTGGCCACTCTCTACCAAGCTGTTaGCAGCGAGGTTCACACCATCAATCTGAGTCATCA +
Preference number: 6 (lower is better)
Translates to: PCCVGGHSLPSC*QRGSHHQSESS
Trigger: TGATGACTCAGATTGATGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGAGTGGCCACCCACGCAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp AGCCGCTGGCCCAGAAGCAGATACTCTGGGTCCGTCTaGCCTTGGATCACTTTCTCCCCAGACTCCTTAACA +
Preference number: 6 (lower is better)
Translates to: SRWPRSRYSGSV*PWITFSPDSLT
Trigger: TGTTAAGGAGTCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTGGGCCAGCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp AGCTCCAGGTTGTCTCTCAGTAGGACAGAGGCCTCCTaGGCCTTCTCGTTGTTCTTCCTGTGCCTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SSRLSLSRTEAS*AFSLFFLCLSS
Trigger: TGAGGACAGGCACAGGAAGAACAACGAGAAGGCCCAGGAGGCCTCTGTCCTACTGAGAGACAACCTGGAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp TGCCCTCTCTGCAGCACATCCTCAACCCGCGGCGTATaGCCCAGAATCTCATTCTGCAGTGTCTGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: CPLCSTSSTRGV*PRISFCSVWFF
Trigger: GAAGAACCAGACACTGCAGAATGAGATTCTGGGCCATACGCCGCGGGTTGAGGATGTGCTGCAGAGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp CACGCTGCTGCCGCAAATGTCGCTTCAGCATCACAATaGCGCCCTCTTCATCCTTGGGGATCTCATCGGAGA +
Preference number: 6 (lower is better)
Translates to: HAAAANVASASQ*RPLHPWGSHRR
Trigger: TCTCCGATGAGATCCCCAAGGATGAAGAGGGCGCCATTGTGATGCTGAAGCGACATTTGCGGCAGCAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp TCTCCCTCCTCTCCTCTCCCTCTTCTCCCTTACTGTTaGAAGCCTTCTTGTTGGGCCCCTCCAGGTCATGCT +
Preference number: 6 (lower is better)
Translates to: SPSSPLPLLPYC*KPSCWAPPGHA
Trigger: AGCATGACCTGGAGGGGCCCAACAAGAAGGCTTCCAACAGTAAGGGAGAAGAGGGAGAGGAGAGGAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS CCA 72 bp ACCTTTCAGCAAGAGGTAGGAAGGCCCCCAAGCAGCTaGATGCCTGAAGCACCAAGGACATCTTCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: TFQQEVGRPPSS*MPEAPRTSSAR
Trigger: CCTGGCTGAAGATGTCCTTGGTGCTTCAGGCATCCAGCTGCTTGGGGGCCTTCCTACCTCTTGCTGAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp CCCCCTGCTCAGGGCATAGGGAGGAGCACACCTTTCTaGGTACTCTGGCTTAGAGATGGCTGTTCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: PPAQGIGRSTPF*VLWLRDGCSQQ
Trigger: TTGCTGAGAACAGCCATCTCTAAGCCAGAGTACCCAGAAAGGTGTGCTCCTCCCTATGCCCTGAGCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp TTGCTGCAGGCCCTGCCACAGCTCCTCCAAGTGTTTTaGCCGCTGACCAATATCCTCCTTCTGCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: LLQALPQLLQVF*PLTNILLLLRV
Trigger: CACCCTGAGCAGAAGGAGGATATTGGTCAGCGGCAAAAACACTTGGAGGAGCTGTGGCAGGGCCTGCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp CTGGCCCAGAAGCAGATACTCTGGGTCCGTCTGGCCTaGGATCACTTTCTCCCCAGACTCCTTAACACGCTG +
Preference number: 6 (lower is better)
Translates to: LAQKQILWVRLA*DHFLPRLLNTL
Trigger: CAGCGTGTTAAGGAGTCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp TCTCTCAGTAGGACAGAGGCCTCCTGGGCCTTCTCGTaGTTCTTCCTGTGCCTGTCCTCAATCAGCTGCACC +
Preference number: 6 (lower is better)
Translates to: SLSRTEASWAFS*FFLCLSSISCT
Trigger: GGTGCAGCTGATTGAGGACAGGCACAGGAAGAACAACGAGAAGGCCCAGGAGGCCTCTGTCCTACTGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp TCCTGGCAGTTCTGGAGGAAGTTCTGTAGCTCCAGGTaGTCTCTCAGTAGGACAGAGGCCTCCTGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SWQFWRKFCSSR*SLSRTEASWAF
Trigger: GAAGGCCCAGGAGGCCTCTGTCCTACTGAGAGACAACCTGGAGCTACAGAACTTCCTCCAGAACTGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp AGGGACTCGCCAAGCTCCAGGCAGGCACTGAAGTTCTaGCTCCGGGTTTCAATCTCTGCATTGATGCCCTGG +
Preference number: 6 (lower is better)
Translates to: RDSPSSRQALKF*LRVSISALMPW
Trigger: CCAGGGCATCAATGCAGAGATTGAAACCCGGAGCAAGAACTTCAGTGCCTGCCTGGAGCTTGGCGAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 72 bp TGGCCAGGCCACTCCTCTCTATGCATCTGGCAGCCTTaGGACCCTAGAGTGTCTGCAATGAGCCAGCATTGG +
Preference number: 6 (lower is better)
Translates to: WPGHSSLCIWQP*DPRVSAMSQHW
Trigger: CCAATGCTGGCTCATTGCAGACACTCTAGGGTCCAAAGGCTGCCAGATGCATAGAGAGGAGTGGCCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 90 bp ATGATGCCCAGCTGGCGCTCAGCCACATTGAATGCGTGCTCCAGGTaGTGCCGGGCATTGGAGTCCTTCAGCTTATCAAAGTCGATCAGG +
Preference number: 6 (lower is better)
Translates to: MMPSWRSATLNACSR*CRALESFSLSKSIR
Trigger: CCTGATCGACTTTGATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCTGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp TTCCCCTCGGTGAACTTCAGGGTGGCTGCGGTGATGGCCTTCACTTaGTCCCCTTGGATGGCGATGTCAGCTTCCATCAACTTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: FPSVNFRVAAVMAFT*SPWMAMSASINLCF
Trigger: GAAGCACAAGTTGATGGAAGCTGACATCGCCATCCAAGGGGACAAAGTGAAGGCCATCACCGCAGCCACCCTGAAGTTCACCGAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp AGAGTGAGCTCCTGGCAGTTCTGGAGGAAGTTCTGTAGCTCCAGGTaGTCTCTCAGTAGGACAGAGGCCTCCTGGGCCTTCTCGTTGTTC +
Preference number: 6 (lower is better)
Translates to: RVSSWQFWRKFCSSR*SLSRTEASWAFSLF
Trigger: GAACAACGAGAAGGCCCAGGAGGCCTCTGTCCTACTGAGAGACAACCTGGAGCTACAGAACTTCCTCCAGAACTGCCAGGAGCTCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 72 bp GAGTGTATTGTCTCTGCTGCTACCTCACTCTTGCTGTaGATACTGCTGCTTCCCAGGCGGACCTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: ECIVSAATSLLL*ILLLPRRTCWL
Trigger: GAGCCAGCAGGTCCGCCTGGGAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAATACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp TGGCGCTCAGCCACATTGAATGCGTGCTCCAGGTTGTaGCGGGCATTGGAGTCCTTCAGCTTATCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: WRSATLNACSRL*RALESFSLSKS
Trigger: CGACTTTGATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp TTGTCTCTGCTGCTACCTCACTCTTGCTGTGAATACTaGTGCTTCCCAGGCGGACCTGCTGGCTCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: LSLLLPHSCCEY*CFPGGPAGSSL
Trigger: AAGAGAGGAGCCAGCAGGTCCGCCTGGGAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp AGCTGGCGCTCAGCCACATTGAATGCGTGCTCCAGGTaGTGCCGGGCATTGGAGTCCTTCAGCTTATCAAAG +
Preference number: 6 (lower is better)
Translates to: SWRSATLNACSR*CRALESFSLSK
Trigger: CTTTGATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGCTGAGCGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp CAGGGTGGCTGCGGTGATGGCCTTCACTTTGTCCCCTaGGATGGCGATGTCAGCTTCCATCAACTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: QGGCGDGLHFVP*DGDVSFHQLVL
Trigger: AAGCACAAGTTGATGGAAGCTGACATCGCCATCCAAGGGGACAAAGTGAAGGCCATCACCGCAGCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp GTGAACTTCAGGGTGGCTGCGGTGATGGCCTTCACTTaGTCCCCTTGGATGGCGATGTCAGCTTCCATCAAC +
Preference number: 6 (lower is better)
Translates to: VNFRVAAVMAFT*SPWMAMSASIN
Trigger: GTTGATGGAAGCTGACATCGCCATCCAAGGGGACAAAGTGAAGGCCATCACCGCAGCCACCCTGAAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp TCCAGCCCACGGAGCTCATCCTCAAAGGCCTTGTGCTaGCGCTGTAAGATGAGCACACTGGTCAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: SSPRSSSSKALC*RCKMSTLVRSL
Trigger: CAAAGACCTGACCAGTGTGCTCATCTTACAGCGCAAGCACAAGGCCTTTGAGGATGAGCTCCGTGGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp AACTTGTCCCGCAGAAGAGTCACGTGGTCAAAGTCTTaGCCCATTTCCGGGGAAGAGGCCACTAGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: NLSRRRVTWSKS*PISGEEATSSF
Trigger: AAAGGAGCTAGTGGCCTCTTCCCCGGAAATGGGGCAAGACTTTGACCACGTGACTCTTCTGCGGGACAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CCA 72 bp AGCGGGCTTCCCACTTCTCATTCATCTCTTTCCTCCTaGACATCACCTGCTGCAGTTTCTCGCGGATCTCCT +
Preference number: 6 (lower is better)
Translates to: SGLPTSHSSLSS*TSPAAVSRGSP
Trigger: AGGAGATCCGCGAGAAACTGCAGCAGGTGATGTCCAGGAGGAAAGAGATGAATGAGAAGTGGGAAGCCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 72 bp GCCACATTGAATGCGTGCTCCAGGTTGTGCCGGGCATaGGAGTCCTTCAGCTTATCAAAGTCGATCAGGTCG +
Preference number: 6 (lower is better)
Translates to: ATLNACSRLCRA*ESFSLSKSIRS
Trigger: CGACCTGATCGACTTTGATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp AAACAGCTCCCCCAGCTCCTCTTTTCGCACATTCACTaGGTCCTCCACTCGCTTCAGCTTAGCCAACATCCG +
Preference number: 6 (lower is better)
Translates to: KQLPQLLFSHIH*VLHSLQLSQHP
Trigger: CGGATGTTGGCTAAGCTGAAGCGAGTGGAGGACCAAGTGAATGTGCGAAAAGAGGAGCTGGGGGAGCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 72 bp AGCGTCTCATCCTCTAAGTCCCGGCTGATCTGCAGCTaGGCTCTGGATGATTCCAGCTGCTTCTTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: SVSSSKSRLICS*ALDDSSCFFLL
Trigger: AAGGAGGAAGAAGCAGCTGGAATCATCCAGAGCCAAGCTGCAGATCAGCCGGGACTTAGAGGATGAGACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS CAA 90 bp CCCTCCCTGGCCATCAGCAGGTCTAACAGGTCCTTTCTCCATCATTaGATGGGAACTTTTTGGACAGGGCAGTGGTTCCTAACCCTGGCT +
Preference number: 6 (lower is better)
Translates to: PSLAISRSNRSFLHH*MGTFWTGQWFLTLA
Trigger: AGCCAGGGTTAGGAACCACTGCCCTGTCCAAAAAGTTCCCATCAAATGATGGAGAAAGGACCTGTTAGACCTGCTGATGGCCAGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp AGCTCCATAGGCGCAGTATATTGTCCTTGCGGGCCGTaGTGCGCTTCTGGTCATGGTAGTTCTCTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SSIGAVYCPCGP*CASGHGSSLSP
Trigger: TGGAGAAAGAGAACTACCATGACCAGAAGCGCATCACGGCCCGCAAGGACAATATACTGCGCCTATGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp CATCTCCTTATGCTAGACCTTGCTGATCTGCCCTTTTaGCTGTTGGGGCAGAAGAAAGAGAGGGCAGGACAG +
Preference number: 6 (lower is better)
Translates to: HLLMLDLADLPF*LLGQKKERAGQ
Trigger: CTGTCCTGCCCTCTCTTTCTTCTGCCCCAACAGGCAAAAGGGCAGATCAGCAAGGTCTAGCATAAGGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp TGTAAGGTGGCTGGTTGCCCACATTTTCAAACTCTGTaGCCGATGTCATGTCAGCAGGCTCTTAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: CKVAGCPHFQTL*PMSCQQALSSS
Trigger: GGAGCTGCTAAGAGCCTGCTGACATGACATCGGCCACAGAGTTTGAAAATGTGGGCAACCAGCCACCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp AGCCAAGCCTTCAGGTCATCCGCATCGCCCTGGAACTaGAAAAAGTTCTCAGCATCCTGGAGGTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SQAFRSSASPWN*KKFSASWRFFL
Trigger: CAAGAAGAACCTCCAGGATGCTGAGAACTTTTTCCAGTTCCAGGGCGATGCGGATGACCTGAAGGCTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp CCATGTTCTCCTCCCTGGTCTGAATCCTTTAGACTATaGGGCAAACCCGAAACAGAGGATGGAGGATGGGAG +
Preference number: 6 (lower is better)
Translates to: PCSPPWSESFRL*GKPETEDGGWE
Trigger: CTCCCATCCTCCATCCTCTGTTTCGGGTTTGCCCCATAGTCTAAAGGATTCAGACCAGGGAGGAGAACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp CTCCATCATTTGATGGGAACTTTTTGGACAGGGCAGTaGTTCCTAACCCTGGCTGCCTTCCGCAATCACCTC +
Preference number: 6 (lower is better)
Translates to: LHHLMGTFWTGQ*FLTLAAFRNHL
Trigger: GAGGTGATTGCGGAAGGCAGCCAGGGTTAGGAACCACTGCCCTGTCCAAAAAGTTCCCATCAAATGATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp CAGGGCATAGGGAGGAGCACACCTTTCTGGGTACTCTaGCTTAGAGATGGCTGTTCTCAGCAAAATTGGGAG +
Preference number: 6 (lower is better)
Translates to: QGIGRSTPFWVL*LRDGCSQQNWE
Trigger: CTCCCAATTTTGCTGAGAACAGCCATCTCTAAGCCAGAGTACCCAGAAAGGTGTGCTCCTCCCTATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp AACTGGAAAAAGTTCTCAGCATCCTGGAGGTTCTTCTaGCAGAAGGCAGCCAGGTCCTTCAGCTGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: NWKKFSASWRFF*QKAARSFSWSH
Trigger: GTGGGACCAGCTGAAGGACCTGGCTGCCTTCTGCAAGAAGAACCTCCAGGATGCTGAGAACTTTTTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp TTGGATCACTTTCTCCCCAGACTCCTTAACACGCTGGTAGCTGTCTaGGTGCCCGTCAATCTCATCCTTGATACCTGCATGCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: LDHFLPRLLNTLVAV*VPVNLILDTCMLLQ
Trigger: CTGCAGCAGCATGCAGGTATCAAGGATGAGATTGACGGGCACCAAGACAGCTACCAGCGTGTTAAGGAGTCTGGGGAGAAAGTGATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 72 bp ACCAAGCTGTTGGCAGCGAGGTTCACACCATCAATCTaGGTCATCAAGGTCTTCATCTCCTGGTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: TKLLAARFTPSI*VIKVFISWSRM
Trigger: CATCCTGGACCAGGAGATGAAGACCTTGATGACTCAGATTGATGGTGTGAACCTCGCTGCCAACAGCTTGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 72 bp GGTCTTTTGTGGACTCCACTACCTTTGTCTTGTCCGTaGTCCACTTGCTGGTCTCCTCGCAATCTACGCAGT +
Preference number: 6 (lower is better)
Translates to: GLLWTPLPLSCP*STCWSPRNLRS
Trigger: ACTGCGTAGATTGCGAGGAGACCAGCAAGTGGATCACGGACAAGACAAAGGTAGTGGAGTCCACAAAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp TGGCCCACATTCCTTGGCAGGGACATTCAGAGGCTATaGCAGTGCGATCAAAAATTATGTGGCCAGGTCACA +
Preference number: 6 (lower is better)
Translates to: WPTFLGRDIQRL*QCDQKLCGQVT
Trigger: TGTGACCTGGCCACATAATTTTTGATCGCACTGGCATAGCCTCTGAATGTCCCTGCCAAGGAATGTGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp TTTCAGAGTGTATTGTCTCTGCTGCTACCTCACTCTTaGTGTGAATACTGCTGCTTCCCAGGCGGACCTGCT +
Preference number: 6 (lower is better)
Translates to: FQSVLSLLLPHS*CEYCCFPGGPA
Trigger: AGCAGGTCCGCCTGGGAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAATACACTCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 90 bp ACCAGCTTGTTTCCAGAGTCCACAGGACTCAAGACCTTATCCCGGTaGTTCTCCATAGACCCCAAGAAATCCTCAAACTTCCGGATCCCA +
Preference number: 6 (lower is better)
Translates to: TSLFPESTGLKTLSR*FSIDPKKSSNFRIP
Trigger: TGGGATCCGGAAGTTTGAGGATTTCTTGGGGTCTATGGAGAACAACCGGGATAAGGTCTTGAGTCCTGTGGACTCTGGAAACAAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 90 bp GCTCATCTTTCGAGCAGCCTGCTCTGCCTCATCTTTCAGAGTGTATaGTCTCTGCTGCTACCTCACTCTTGCTGTGAATACTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: AHLSSSLLCLIFQSV*SLLLPHSCCEYCCF
Trigger: GAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAATACACTCTGAAAGATGAGGCAGAGCAGGCTGCTCGAAAGATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp TTGCTCCGGGTTTCAATCTCTGCATTGATGCCCTGGTaGTACTTCATGAGCAGTTCCACAGAGGAGACATCC +
Preference number: 6 (lower is better)
Translates to: LLRVSISALMPW*YFMSSSTEETS
Trigger: GGATGTCTCCTCTGTGGAACTGCTCATGAAGTATCACCAGGGCATCAATGCAGAGATTGAAACCCGGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp TCCCCCTGTATGAACGGATTGGCCTTTACCAGAACGTaGTCTAATGTAAAAAGGCAAGAGGTGAGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: SPCMNGLAFTRT*SNVKRQEVREG
Trigger: GCCTTCCCTCACCTCTTGCCTTTTTACATTAGAGCACGTTCTGGTAAAGGCCAATCCGTTCATACAGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342835.9
CDS GCA 72 bp GCAGGCACTGAAGTTCTTGCTCCGGGTTTCAATCTCTaGATTGATGCCCTGGTGATACTTCATGAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: AGTEVLAPGFNL*IDALVILHEQF
Trigger: GAACTGCTCATGAAGTATCACCAGGGCATCAATGCAGAGATTGAAACCCGGAGCAAGAACTTCAGTGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000553938.5
ENST00000644917.1
CDS GCA 72 bp TACAGGTTGTTCCAGGACACGTGGGAAGCATGTTGCTaGATTTCTACAGCAACAGACTCTGTTTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: YRLFQDTWEACC*ISTATDSVSSS
Trigger: GGAGGAGGAAACAGAGTCTGTTGCTGTAGAAATGCAGCAACATGCTTCCCACGTGTCCTGGAACAACCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS GCA 72 bp CAGTACAGGTTGTTCCAGGACACGTGGGAAGCATGTTaGTGCATTTCTACAGCAACAGACTCTGTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: QYRLFQDTWEAC*CISTATDSVSS
Trigger: GGAGGAAACAGAGTCTGTTGCTGTAGAAATGCAGCAACATGCTTCCCACGTGTCCTGGAACAACCTGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553938.5
CDS GCA 72 bp GCCTGCTCTGCCTCATCTTTCAGAGTGTATTGTCTCTaGTGCTACCTCACTCTTGCTGTGAATACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: ACSASSFRVYCL*CYLTLAVNTAA
Trigger: AGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAATACACTCTGAAAGATGAGGCAGAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp GAACTCTCTAGTTGCTGGCTCATCTTTCGAGCAGCCTaGTCTGCCTCATCTTTCAGAGTGTATTGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: ELSSCWLIFRAA*SASSFRVYCLC
Trigger: GCAGAGACAATACACTCTGAAAGATGAGGCAGAGCAGGCTGCTCGAAAGATGAGCCAGCAACTAGAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp AACTTTTTGGACAGGGCAGTGGTTCCTAACCCTGGCTaGCTTCCGCAATCACCTCAGGTGCTTTCAAAAGAA +
Preference number: 6 (lower is better)
Translates to: NFLDRAVVPNPG*LPQSPQVLSKE
Trigger: TTCTTTTGAAAGCACCTGAGGTGATTGCGGAAGGCAGCCAGGGTTAGGAACCACTGCCCTGTCCAAAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp CTTAAGATGCCCAGTCATCACTCTGCAGTTAACCTGTaGGAATGTAGCCAGCTGCATGCTAAGGAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: LKMPSHHSAVNL*ECSQLHAKEGK
Trigger: CTTTCCCTCCTTAGCATGCAGCTGGCTACATTCCCACAGGTTAACTGCAGAGTGATGACTGGGCATCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp CAGAGGATGGAGGATGGGAGGATGTGGGCCCCATGTTaGACATCAGATCGAAGCTTTAAACTGAAACAACTG +
Preference number: 6 (lower is better)
Translates to: QRMEDGRMWAPC*TSDRSFKLKQL
Trigger: CAGTTGTTTCAGTTTAAAGCTTCGATCTGATGTCCAACATGGGGCCCACATCCTCCCATCCTCCATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CCA 72 bp AACAGGTCCTTTCTCCATCATTTGATGGGAACTTTTTaGACAGGGCAGTGGTTCCTAACCCTGGCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: NRSFLHHLMGTF*TGQWFLTLAAF
Trigger: GAAGGCAGCCAGGGTTAGGAACCACTGCCCTGTCCAAAAAGTTCCCATCAAATGATGGAGAAAGGACCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp GACACTAGTTTCCCATCGTGGGGTGTGTACACTTTCTaGTTGTTGGCTCTCATCCGGGACTGGATGGTAAAA +
Preference number: 6 (lower is better)
Translates to: DTSFPSWGVYTF*LLALIRDWMVK
Trigger: TTTTACCATCCAGTCCCGGATGAGAGCCAACAATCAGAAAGTGTACACACCCCACGATGGGAAACTAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS GCA 72 bp TGCTCTGCCTCATCTTTCAGAGTGTATTGTCTCTGCTaGTACCTCACTCTTGCTGTGAATACTGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: CSASSFRVYCLC*YLTLAVNTAAS
Trigger: GGAAGCAGCAGTATTCACAGCAAGAGTGAGGTAGCAGCAGAGACAATACACTCTGAAAGATGAGGCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp GCCATCAGCAGGTCTAACAGGTCCTTTCTCCATCATTaGATGGGAACTTTTTGGACAGGGCAGTGGTTCCTA +
Preference number: 6 (lower is better)
Translates to: AISRSNRSFLHH*MGTFWTGQWFL
Trigger: TAGGAACCACTGCCCTGTCCAAAAAGTTCCCATCAAATGATGGAGAAAGGACCTGTTAGACCTGCTGATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 90 bp TTCTCCTTGATCTTGTCTGAGTATAGGTTTCCCTCAGCTACCAGCTaGTTTCCAGAGTCCACAGGACTCAAGACCTTATCCCGGTTGTTC +
Preference number: 6 (lower is better)
Translates to: FSLILSEYRFPSATS*FPESTGLKTLSRLF
Trigger: GAACAACCGGGATAAGGTCTTGAGTCCTGTGGACTCTGGAAACAAGCTGGTAGCTGAGGGAAACCTATACTCAGACAAGATCAAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp TTTCCAGAGTCCACAGGACTCAAGACCTTATCCCGGTaGTTCTCCATAGACCCCAAGAAATCCTCAAACTTC +
Preference number: 6 (lower is better)
Translates to: FPESTGLKTLSR*FSIDPKKSSNF
Trigger: GAAGTTTGAGGATTTCTTGGGGTCTATGGAGAACAACCGGGATAAGGTCTTGAGTCCTGTGGACTCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CAA 72 bp ATCTTGTCTGAGTATAGGTTTCCCTCAGCTACCAGCTaGTTTCCAGAGTCCACAGGACTCAAGACCTTATCC +
Preference number: 6 (lower is better)
Translates to: ILSEYRFPSATS*FPESTGLKTLS
Trigger: GGATAAGGTCTTGAGTCCTGTGGACTCTGGAAACAAGCTGGTAGCTGAGGGAAACCTATACTCAGACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS TCA 72 bp TCTATAATGAGAAAACCAGTGCTCAGAGAGGTCAAGTaGCTTGCCCAAGGTTATACTGTCGGAGTAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SIMRKPVLREVK*LAQGYTVGVGR
Trigger: TCTGCCTACTCCGACAGTATAACCTTGGGCAAGTCACTTGACCTCTCTGAGCACTGGTTTTCTCATTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp TTCTCGTTGTTCTTCCTGTGCCTGTCCTCAATCAGCTaGACCTTCTCCTTGATCTTGTCTGAGTATAGGTTT +
Preference number: 6 (lower is better)
Translates to: FSLFFLCLSSIS*TFSLILSEYRF
Trigger: AAACCTATACTCAGACAAGATCAAGGAGAAGGTGCAGCTGATTGAGGACAGGCACAGGAAGAACAACGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389720.4
ENST00000389722.7
ENST00000644917.1
CDS CCA 72 bp GGTATAGGAGGCAGTTCGGAATATGCACTCCCAAAATaGACAGACCTGAGCTTTTATCCCATCTTTATGGTG +
Preference number: 6 (lower is better)
Translates to: GIGGSSEYALPK*TDLSFYPIFMV
Trigger: CACCATAAAGATGGGATAAAAGCTCAGGTCTGTCCATTTTGGGAGTGCATATTCCGAACTGCCTCCTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp GGGCCCCATGTTGGACATCAGATCGAAGCTTTAAACTaGAACAACTGGGCAGACTTTTTATCCACTGAAAGT +
Preference number: 6 (lower is better)
Translates to: GPHVGHQIEALN*NNWADFLSTES
Trigger: ACTTTCAGTGGATAAAAAGTCTGCCCAGTTGTTTCAGTTTAAAGCTTCGATCTGATGTCCAACATGGGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp AACAAAGCTAATAGGTATAGGAGGCAGTTCGGAATATaGACTCCCAAAATGGACAGACCTGAGCTTTTATCC +
Preference number: 6 (lower is better)
Translates to: NKANRYRRQFGI*TPKMDRPELLS
Trigger: GGATAAAAGCTCAGGTCTGTCCATTTTGGGAGTGCATATTCCGAACTGCCTCCTATACCTATTAGCTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 90 bp AGTTCTGCTGCTAAGACAAGTTCGGCAACCACTTATAGTAGAATGTaGAATGGGAACTCTTCTGGTACTTTCAAATTGTGCCTAAAGCCC +
Preference number: 6 (lower is better)
Translates to: SSAAKTSSATTYSRM*NGNSSGTFKLCLKP
Trigger: GGGCTTTAGGCACAATTTGAAAGTACCAGAAGAGTTCCCATTCAACATTCTACTATAAGTGGTTGCCGAACTTGTCTTAGCAGCAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp GCAGTTCGGAATATGCACTCCCAAAATGGACAGACCTaGGCTTTTATCCCATCTTTATGGTGTTCATCTTTT +
Preference number: 6 (lower is better)
Translates to: AVRNMHSQNGQT*AFIPSLWCSSF
Trigger: AAAAGATGAACACCATAAAGATGGGATAAAAGCTCAGGTCTGTCCATTTTGGGAGTGCATATTCCGAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 90 bp TATTTTCCTTCAGTAAACCTTTTGCTTACATTACTACTTGGTCTCTaGGCCGAATTCTCCCAAGACAGACTAAGAATTGAGGACTCTGCA +
Preference number: 6 (lower is better)
Translates to: YFPSVNLLLTLLLGL*AEFSQDRLRIEDSA
Trigger: TGCAGAGTCCTCAATTCTTAGTCTGTCTTGGGAGAATTCGGCCAAGAGACCAAGTAGTAATGTAAGCAAAAGGTTTACTGAAGGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp CTAAGACAAGTTCGGCAACCACTTATAGTAGAATGTTaGATGGGAACTCTTCTGGTACTTTCAAATTGTGCC +
Preference number: 6 (lower is better)
Translates to: LRQVRQPLIVEC*MGTLLVLSNCA
Trigger: GGCACAATTTGAAAGTACCAGAAGAGTTCCCATTCAACATTCTACTATAAGTGGTTGCCGAACTTGTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS GCA 72 bp AGGGAAAGAAAGCAAAGGAGAAATTCCTACGAGATATaGACGTGCAATAAATACCAATATACACCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RERKQRRNSYEI*TCNKYQYTPFL
Trigger: CAGGAAGGGTGTATATTGGTATTTATTGCACGTGCATATCTCGTAGGAATTTCTCCTTTGCTTTCTTTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp TCAGTAAACCTTTTGCTTACATTACTACTTGGTCTCTaGGCCGAATTCTCCCAAGACAGACTAAGAATTGAG +
Preference number: 6 (lower is better)
Translates to: SVNLLLTLLLGL*AEFSQDRLRIE
Trigger: CTCAATTCTTAGTCTGTCTTGGGAGAATTCGGCCAAGAGACCAAGTAGTAATGTAAGCAAAAGGTTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS CAA 72 bp GCTAAGACAAGTTCGGCAACCACTTATAGTAGAATGTaGAATGGGAACTCTTCTGGTACTTTCAAATTGTGC +
Preference number: 6 (lower is better)
Translates to: AKTSSATTYSRM*NGNSSGTFKLC
Trigger: GCACAATTTGAAAGTACCAGAAGAGTTCCCATTCAACATTCTACTATAAGTGGTTGCCGAACTTGTCTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1
CDS TCA 72 bp GAAAGGGTTATGTGGCTGGGAAAGTTTGGAAACCACTaGCTTAGTCTAATGCTTTCGATCTATAATGAGAAA +
Preference number: 6 (lower is better)
Translates to: ERVMWLGKFGNH*LSLMLSIYNEK
Trigger: TTTCTCATTATAGATCGAAAGCATTAGACTAAGTCAGTGGTTTCCAAACTTTCCCAGCCACATAACCCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556227.1