RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPTA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163554

Ensembl transcript IDs: ENST00000461624.1, ENST00000465741.1, ENST00000481212.5, ENST00000484520.1, ENST00000485680.1, ENST00000492934.1, ENST00000498708.1, ENST00000643759.2, ENST00000647256.1

Found 509 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGACACCCCTCAGCAGTaGCTAGTTGCATACAAAATA +
Preference number: 2 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYDTPQQ*LVAYKI
Trigger: TATTTTGTATGCAACTAGTCACTGCTGAGGGGTGTC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643759.2
3UTR-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCTTTATCTTCCACATTaGCCTGTACTCTTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYLYLPH*PVLFAP
Trigger: GGGGGCAAAGAGTACAGGCAAATGTGGAAGATAAAG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
3UTR-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATATAAAAATAGAAACTTaGACACCCCTCAGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYIKIET*TPLSSD
Trigger: GTCACTGCTGAGGGGTGTCAAAGTTTCTATTTTTAT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCAACAGCATGGGCACTaGCCAGCAGCTGCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLQQHGH*PAAAAV
Trigger: AACAGCGGCAGCTGCTGGGCAGTGCCCATGCTGTTG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCGGGGGCTGCGGGCCTaGAAGTCATATAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLRGLRA*KSYKAM
Trigger: CATGGCTTTATATGACTTCCAGGCCCGCAGCCCCCG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTAACTCCCTCCACTGGTaGAGCCTGTTGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLNSLHW*SLLLLA
Trigger: TGCCAGCAACAACAGGCTGCACCAGTGGAGGGAGTT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCAGGTTCCTTCTCCTTaGTCCACTGGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLQVPSP*STGWLQ
Trigger: CTGAAGCCATCCAGTGGATCAAGGAGAAGGAACCTG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTTTCTGTCTGTGGACTaGCGAGGCTTCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLFLSVD*RGFQQL
Trigger: CAGTTGCTGGAAGCCTCGGCAGTCCACAGACAGAAA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTGCTGGTTGGCCTCATaGAACTGGGTCCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLCWLAS*NWVPFC
Trigger: ACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCTGCCGCTGTTCATCTaGAAGCCTCTGCAAAGAACC +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLLPLFI*KPLQRT
Trigger: GGTTCTTTGCAGAGGCTTGCAGATGAACAGCGGCAG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCTGAAGCCAAGTCCCTaGCCTGATCTTTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLLKPSP*PDLSWP
Trigger: TGGCCATGAAAGATCAGGCCAGGGACTTGGCTTCAG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTAGGGCCCGCAGCAACTaGTCACCCTTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSRARSN*SPFSRV
Trigger: GACCCTGGAGAAGGGTGACCAGTTGCTGCGGGCCCT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTGCTTCTTCTTTCGGGTaGCCAGTGGCTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLASSFG*PVALSE
Trigger: CTCTGAAAGAGCCACTGGCCACCCGAAAGAAGAAGC...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTGCATTCACGAGGTCTTaGCCAGTCTCATCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLAFTRS*PVSSAD
Trigger: ATCTGCTGATGAGACTGGTCAAGACCTCGTGAATGC...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTAATGTTCTAGGTCAGTaGTCTTCCCTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLNVLGQ*SSLPGQ
Trigger: CTGCCCAGGAAGGGAAGATCACTGACCTAGAACATT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTATGTATTCAGGTCCTTaGGTGCATCCTCTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLMYSGP*VHPLEP
Trigger: TGGCTCGAGAGGATGCACTCAAGGACCTGAATACAT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCCTTGGCCAACTCTTTaGGCTTCTCCCAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLPWPTL*ASPSVQ
Trigger: TTGAACACTGGGAGAAGCTCAAAGAGTTGGCCAAGG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCTTCCAAGCAGCTATTaGCTTAGCCAGAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLLPSSY*LSQRRG
Trigger: ACCCCTTCTCTGGCTAAGGCAATAGCTGCTTGGAAG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTCGGGAAGTCTCTCTTaGTGGAAACTCTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLSGSLS*WKLCRL
Trigger: CAGTCTGCAGAGTTTCCAGCAAGAGAGACTTCCCGA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGCACTGCCCAGCAGCTaGCGCTGTTCATCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSALPSS*RCSSAS
Trigger: GCTTGCAGATGAACAGCGGCAGCTGCTGGGCAGTGC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGAAGGTGGGAGCCTCTaGCTCCATGTCAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSEGGSL*LHVSTV
Trigger: CACCGTGCTGACATGGAGGCAGAGGCTCCCACCTTC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTATGGCTTCGACCCCGTaGGTCCATATATTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLMASTP*VHILLH
Trigger: ATGCAGCAATATATGGACCCACGGGGTCGAAGCCAT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTAAGGGTAGGTCAGGATaGTTTTCCTCGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLKGRSG*FSSAHS
Trigger: TGAGTGTGCCGAGGAAAACCATCCTGACCTACCCTT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTCAAATTGCAGCTGCTaGTTGGCCTCATGCAACTGG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLSNCSC*LASCNW
Trigger: CCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCGCTCCTTGAAACTTTaGTACCGAGTCAACACTTCC +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLRSLKL*YRVNTS
Trigger: GGAAGTGTTGACTCGGTATCAAAGTTTCAAGGAGCG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACACCTTTCTTCATGGTaGCTTCTCGGGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTHLSSW*LLGGCG
Trigger: CCCGCAGCCCCCGAGAAGTCACCATGAAGAAAGGTG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTGGAACTTTTGTCATCTaGCCTCAGGGAATTCTCACG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLGTFVI*PQGILT
Trigger: CGTGAGAATTCCCTGAGGTCAGATGACAAAAGTTCC...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCAATCAGTTGTGCTTTaGGAGCCTTCCACCTGTCTA +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLQSVVL*EPSTCL
Trigger: TAGACAGGTGGAAGGCTCTCAAAGCACAACTGATTG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTTCTCCTTGATCCACTaGATGGCTTCAGTCACATCC +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLFSLIH*MASVTS
Trigger: GGATGTGACTGAAGCCATCCAGTGGATCAAGGAGAA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAGCTCCTGGCGCTGGGTaGTGTTTCCTGGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQAPGAG*CFLALL
Trigger: GAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGC...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACTGGATGGGACTCACTaGGCCGCTCTGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIELDGTH*AALLSP
Trigger: GGGAGACAGCAGAGCGGCTCAGTGAGTCCCATCCAG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTATGACGCCATGCACCTaGTCAGATCGGCCATCGACT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSMTPCT*SDRPST
Trigger: AGTCGATGGCCGATCTGAGCAGGTGCATGGCGTCAT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTGTACTCGGGTCTCATaGACAGCAAAGTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLCTRVS*TAKSFS
Trigger: GGAAAATGACTTTGCTGTCCATGAGACCCGAGTACA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCTGTACATACTGCTaGAACTTCAGGGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSSCTYC*NFRARS
Trigger: GCTGCGGGCCCTGAAGTTCCAGCAGTATGTACAGGA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATTCTCGTCGCCGCTGTaGGAGCATCGGGAACTCATC +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTFSSPL*EHRELI
Trigger: GATGAGTTCCCGATGCTCCCACAGCGGCGACGAGAA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACTGGGTGATGTTTCCTaGCTCTTCTCGTCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTLGDVS*LFSSPL
Trigger: CAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTAACACTTCAACAGCATaGGCACTGCCCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSNTSTA*ALPSSC
Trigger: GCAGCTGCTGGGCAGTGCCCATGCTGTTGAAGTGTT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTGGATGGCAGGCTCATaGGCCACCAGCTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYWMAGS*ATSSPS
Trigger: AGAGGGGGAGCTGGTGGCCCATGAGCCTGCCATCCA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGTGTTGAACCTCTGTTaGCGACTGGCCTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSVLNLC*RLASLS
Trigger: GCTCAATGAGGCCAGTCGTCAACAGAGGTTCAACAC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCATCAGCCTTCCAGTTaGATTCCTGAAAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLHQPSS*IPERHN
Trigger: ATTATGCCTTTCAGGAATTCAACTGGAAGGCTGATG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGCTCCCGTTCCTCAATaGTGTCAGATAGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSAPVPQ*CQIGAS
Trigger: GGAAGCACCTATCTGACATCATTGAGGAACGGGAGC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCAGTCACATCCCTTTTaGATCGTTGTAAGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLQSHPF*IVVSLQ
Trigger: CTGCAAACTTACAACGATTCAAAAGGGATGTGACTG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTTTTTGCAGAAGCAATaGCTCCTTCAGCAATCTACG +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLFLQKQ*LLQQST
Trigger: CGTAGATTGCTGAAGGAGTCATTGCTTCTGCAAAAA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTGGGTCCATATATTGCTaGATATGTGTGGCACAGAAT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLGSIYC*ICVAQN
Trigger: ATTCTGTGCCACACATATGCAGCAATATATGGACCC...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAGCCAGGGCACGAATATaGTCCCAGCTGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQARARI*SQLETR
Trigger: TCTGGTCTCCAGCTGGGAGCATATTCGTGCCCTGGC...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTAATAGAAAGGCCTCATaGTTCTTTAGAAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLNRKAS*FFRRAP
Trigger: TGGGGCTCTTCTAAAGAAGCATGAGGCCTTTCTATT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACTCACTGAGCCGCTCTaGTGTCTCCCCCAGTATGGT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQLTEPL*CLPQYG
Trigger: ACCATACTGGGGGAGACAGCAGAGCGGCTCAGTGAG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTGTAAGTTTGCAGCATTaGACAGAGCTTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLVSLQH*TELSVS
Trigger: AGAGACAGAAAGCTCTGTCCAATGCTGCAAACTTAC...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAACTCCTCCCAGAGGCTaGCAACTTCACTCAGACGAG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTTPPRG*QLHSDE
Trigger: CTCGTCTGAGTGAAGTTGCCAGCCTCTGGGAGGAGT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGAGGGTTCAGTCTCTTaGATCCAGGCCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTEGSVS*IQASSS
Trigger: GGATGAGGAGGCCTGGATCCAAGAGACTGAACCCTC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAATCTGCTCCTGGCGCTaGGTGATGTTTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTICSWR*VMFPGS
Trigger: AGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGAT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACTGTCTCCCCCAGTATaGTCACCTTATCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTLSPPV*SPYLPG
Trigger: CCCTGGGAGATAAGGTGACCATACTGGGGGAGACAG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCAATGTCTCTGCCTCTaGGAGCCAGAACTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSQCLCL*EPELKV
Trigger: GACTTTGAGTTCTGGCTCTCAGAGGCAGAGACATTG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAGACCGGAACTCTTTGTaGGTCAGGCGCCCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQDRNSL*VRRPVK
Trigger: TTTGACAGGGCGCCTGACTCACAAAGAGTTCCGGTC...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCATAGTCCTCAGAGGTaGGTACAGGTTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSHSPQR*VQVPSP
Trigger: AGGAGAAGGAACCTGTACTCACCTCTGAGGACTATG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGATCTGAGGTGCATCTaGAGGATGGGAAAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSDLRCI*RMGKCQ
Trigger: CTGACACTTTCCCATCCTTCAGATGCACCTCAGATC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATGGAGGCCGTGTTTCCTaGGTCGATTCTGTACCTCGG +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNGGRVS*VDSVPR
Trigger: CCGAGGTACAGAATCGACTCAGGAAACACGGCCTCC...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACGTGGGCCAGTCTTCTaGCATAGACAGCTGGGACAA +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQRGPVF*HRQLGQ
Trigger: TTGTCCCAGCTGTCTATGTCAGAAGACTGGCCCACG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCAGGGTCTGCAGCACTaGGGGCCTGGCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNQGLQH*GPGISS
Trigger: AGAAGAAATGCCAGGCCCTCAGTGCTGCAGACCCTG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGATCCCTGGCCTTGCTaGGGAACAGGTAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSDPWPC*GTGRIS
Trigger: AGAAATTCTACCTGTTCCTCAGCAAGGCCAGGGATC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAAGGTTGATGACGCCATaGACCTGCTCAGATCGGCCA +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQRLMTP*TCSDRP
Trigger: TGGCCGATCTGAGCAGGTGCATGGCGTCATCAACCT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATGCTCCAGGTTGTGTTaGATCCGCAACCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQCSRLC*IRNPSW
Trigger: CCAGCTTGGGTTGCGGATGCAACACAACCTGGAGCA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTATGCAGAACTTCGGTaGGCTCCCAGTCTTCACCTA +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSYAELR*APSLHL
Trigger: TAGGTGAAGACTGGGAGCGCACCGAAGTTCTGCATA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATCCTCAGAGGTGACTTaGCACTCAACATCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTSSEVT*HSTSSS
Trigger: GCTGGAGGATGTTGAGTGGCAAGTCACCTCTGAGGA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTATTGGTTCTCAATCTaGTCCTGGCGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSYWFSI*SWRWVM
Trigger: CATCACCCAGCGCCAGGAGCAGATTGAGAACCAATA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAACGTCTGCGTTCTTCTaGCCGATCCAAGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIETSAFF*PIQEGA
Trigger: CGCTCCCTCTTGGATCGGGCAGAAGAACGCAGACGT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGCAATAGACGACGTCTaGGTTCTTCTGCCCGATCCA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTAIDDV*VLLPDP
Trigger: TGGATCGGGCAGAAGAACGCAGACGTCGTCTATTGC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCAGGGCTAGCATGGTaGCCACTGTCGATAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSSGLAW*PLSISS
Trigger: AGAACTTATCGACAGTGGGCACCATGCTAGCCCTGA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAGCACAGAATGACACTTaGTCTGGGGTAAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQAQNDT*SGVRAC
Trigger: GCAGGCCCTTACCCCAGAGCAAGTGTCATTCTGTGC...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGGAAGTCTCTCTTGCTaGAAACTCTGCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSGSLSC*KLCRLA
Trigger: TGCCAGTCTGCAGAGTTTCCAGCAAGAGAGACTTCC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGCCAAGAAGTCCTCATaGTCTTTCTGCAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTAKKSS*SFCSCR
Trigger: TCGGCAGCTGCAGAAAGACCATGAGGACTTCTTGGC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAACCAGGTATAAGGGCTaGAAGGCACACCTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTTRYKG*KAHLRP
Trigger: AGGCCTTAGGTGTGCCTTCCAGCCCTTATACCTGGT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTATTGAAGGAAGGTACTaGCATTCTGTTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLIEGRY*HSVQTP
Trigger: AGGAGTTTGAACAGAATGCCAGTACCTTCCTTCAAT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCGTAGCTCCTCTATATaGGCCTTCGTTTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSRSSSI*AFVSSW
Trigger: CCACGAAGAAACGAAGGCCCATATAGAGGAGCTACG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCACTCATTGGCATATTaGTTCACTTCAACAACTCTC +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLHSLAY*FTSTTL
Trigger: GAGAGTTGTTGAAGTGAACCAATATGCCAATGAGTG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAATTGCAGCTGCTGGTTaGCCTCATGCAACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQIAAAG*PHATGS
Trigger: GGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAAT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGCAGCACTGAGGGCCTaGCATTTCTTCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTAALRA*HFFSIC
Trigger: GCAGATTGAGAAGAAATGCCAGGCCCTCAGTGCTGC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAAGTCCTCTAAGGCCTaGAAGGTGGGAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYKSSKA*KVGASA
Trigger: GGCAGAGGCTCCCACCTTCCAGGCCTTAGAGGACTT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGTTCTCTCAAGCAGATaGTCCCAATGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSVLSSR*SQCSFS
Trigger: GCTGAAGGAACATTGGGATCATCTGCTTGAGAGAAC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCCCGGATGCTTGTGTTaGACCTCTGTTGACGACTGG +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYPGCLC*TSVDDW
Trigger: CCAGTCGTCAACAGAGGTTCAACACAAGCATCCGGG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGTTTTGCCAGAAGAGTaGGGAAGTCACCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTVLPEE*GSHQGL
Trigger: CAGACCTTGGTGACTTCCTCACTCTTCTGGCAAAAC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCATTTAAAGTCTGCTTaGGCCCTAGCCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYHLKSA*ALAREA
Trigger: GGCCTCCCTGGCTAGGGCTCAAGCAGACTTTAAATG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACGAGTCAACACTTCCTaGCGCCTCTCCTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIERVNTS*RLSWIS
Trigger: AGAGATCCAGGAGAGGCGTCAGGAAGTGTTGACTCG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACATCAGCTACCTTGTTaGTATCCCTTAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTHQLPC*YPLAEA
Trigger: AGCCTCGGCTAAGGGATATCAACAAGGTAGCTGATG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTCAGCACGGTGCTCCTaGTGTCTCTCCAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSARCS*CLSSKI
Trigger: GATCTTGCTGGAGAGACATCAGGAGCACCGTGCTGA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCATGGCCTCTTCATTaGCATCACAAGCGCTACACT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSSWPLH*HHKRYT
Trigger: AGTGTAGCGCTTGTGATGGCAATGAAGAGGCCATGA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATCCTTTTGCAGCTCCTaGTCCCGTTCCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTSFCSS*SRSSMM
Trigger: CATCATTGAGGAACGGGAGCAGGAGCTGCAAAAGGA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCTTGCCTCTTCCTTTTaGAGCTCCTGCTCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNLASSF*SSCSRS
Trigger: GGAACGGGAGCAGGAGCTGCAAAAGGAAGAGGCAAG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAAGAGGCCACATCTTCTaGAGCAAAGTGTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTRGHIF*SKVSFL
Trigger: GAGGAAGGACACTTTGCTGCAGAAGATGTGGCCTCT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAAGGTCAGCCAGGTACTaGTGGAACTGGACATTGGCT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQRSARY*WNWTLA
Trigger: AGCCAATGTCCAGTTCCAGCAGTACCTGGCTGACCT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAAAACCTTTGGCCCACTaGTCTCCACAACGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTKPLAH*SPQRFP
Trigger: AGGAAACCGTTGTGGAGAGCAGTGGGCCAAAGGTTT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACACTCCTGTACATACTaGTGGAACTTCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEHSCTY*WNFRAR
Trigger: GCGGGCCCTGAAGTTCCAGCAGTATGTACAGGAGTG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACAGGGAATTCTCACGTaGCACCATCCAGCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQQGILT*HHPALN
Trigger: GTTGAGAGCTGGATGGTGGCACGTGAGAATTCCCTG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACCCTCTGCCAGGGCTTaGAAGGCATTCTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTPSARA*KAFSIS
Trigger: TGAAATAGAGAATGCCTTCCAAGCCCTGGCAGAGGG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAGCAGGTCCCACAGGTaGCGTAGCTCCTCTATATGG +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESRSHR*RSSSIW
Trigger: CCATATAGAGGAGCTACGCCACCTGTGGGACCTGCT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCAGAGGCTTCATGATTaGCATTCACGAGGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSQRLHD*HSRGLD
Trigger: GTCAAGACCTCGTGAATGCCAATCATGAAGCCTCTG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCTTCACTCAGACGAGTaGTCACATTGTCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSLHSDE*SHCQRH
Trigger: ATGCCTCTGACAATGTGACCACTCGTCTGAGTGAAG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACTTTCGGGTGGCCAGTaGCTCTTTCAGAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTLSGGQ*LFQSFK
Trigger: TTTGAAGCTCTGAAAGAGCCACTGGCCACCCGAAAG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATCAGTGGCATCTGGATaGGACTCACTGAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESVASG*DSLSRS
Trigger: AGAGCGGCTCAGTGAGTCCCATCCAGATGCCACTGA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATCTGCAGGTCCTCAGTaGCATCTGGATGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESAGPQ*HLDGTH
Trigger: GTGAGTCCCATCCAGATGCCACTGAGGACCTGCAGA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGCAGCTGCCAATTCTTaGACATTCAGGAAACGCTTG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSAAANS*TFRKRL
Trigger: CAAGCGTTTCCTGAATGTCCAAGAATTGGCAGCTGC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTGGGCAAGTAGTAATTaGGTCCTCTCAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYWASSN*VLSGRT
Trigger: GGTCCTGCCTGAGAGGACTCAATTACTACTTGCCCA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAGTATAGTCCTCCAGTaGGACATAGCCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESIVLQ*DIALPP
Trigger: GGGAGGAAGGGCTATGTCTCACTGGAGGACTATACT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCAAAGTAGGAATTGGTaGAGCCAACGTAGTCATAGC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSQSRNW*SQRSHS
Trigger: GCTATGACTACGTTGGCTTCACCAATTCCTACTTTG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTACAGTGCACAGGCTCTaGCAAGTTTTCTTCCATCTT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSTVHRL*QVFFHL
Trigger: AAGATGGAAGAAAACTTGTCAGAGCCTGTGCACTGT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGTTTCCAGGATCCATTaGAGGAAGGTACTGGCATTC +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTVSRIH*RKVLAF
Trigger: GAATGCCAGTACCTTCCTTCAATGGATCCTGGAAAC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACTTCACTCACACCTTTaGTGTCCTTGGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQLHSHL*CPWPGS
Trigger: AGATCCAGGCCAAGGACATCAAAGGTGTGAGTGAAG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATTCATCTCCTGGATCTaGGGTGCATCTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQFISWI*GASEGW
Trigger: CCATCCTTCAGATGCACCTCAGATCCAGGAGATGAA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGCAGCTCATCAGCATTaGTCGCAGCAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYAAHQH*SQQSSR
Trigger: ACGAGAAGACTGCTGCGATCAATGCTGATGAGCTGC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTTCTGCACTGCCCAGTaGGTTTCCCAGATCCTCGTT +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNFCTAQ*VSQILV
Trigger: AACGAGGATCTGGGAAACTCACTGGGCAGTGCAGAA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCTTGTCTACAGTTATaGTCTTCTCTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSSCLQL*SSLPGQ
Trigger: CTGCCCAGGAAGAGAAGATCATAACTGTAGACAAGA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATGGCAGGCGTTTGCCTaGTTCCGCAGAGCTTTCATA +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEWQAFA*FRRAFI
Trigger: TATGAAAGCTCTGCGGAATCAGGCAAACGCCTGCCA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAAATTCCTGCCGGATTTaGGCTCCTTCTGGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTNSCRI*APSGVR
Trigger: TCTAACACCAGAAGGAGCTCAAATCCGGCAGGAATT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGAAGAGCCTGAACACTaGACAGATCTGAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYEEPEH*TDLSQG
Trigger: ACCCTGGCTCAGATCTGTTCAGTGTTCAGGCTCTTC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATGCCACCAATGCTACTaGTCCAGTTCTGCAGATCCC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIECHQCY*SSSADP
Trigger: GGGATCTGCAGAACTGGATCAGTAGCATTGGTGGCA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCCCTTCCTGGGCAGTaGTTGCTTTGTCCAAATCGT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSLPGQ*LLCPNR
Trigger: ACGATTTGGACAAAGCAATCACTGCCCAGGAAGGGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTGGGCAGCATCTCACTaGTCCATTCTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYWAASH*SILPAP
Trigger: AGGAGCTGGAAGAATGGATCAGTGAGATGCTGCCCA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCAGTGTTCAACAAACTaGGCCAGCCGCAACTGGATC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYQCSTN*ASRNWI
Trigger: GATCCAGTTGCGGCTGGCTCAGTTTGTTGAACACTG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCCTCAGCATTCTGCATaGATTGCAAGTATTCTAGGG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSPQHSA*IASILG
Trigger: CCCTAGAATACTTGCAATTCATGCAGAATGCTGAGG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCTGTTATCTCTTGAATaGGTGGTTCATGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSLLSLE*VVHGWQ
Trigger: TTGCCAGCCATGAACCACGCATTCAAGAGATAACAG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACATGTTTCTGCTTCATaGAGGTCAGCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQHVSAS*RSARYC
Trigger: GCAGTACCTGGCTGACCTGCATGAAGCAGAAACATG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTTGCTGGCAGGCGTTTaGCTGATTCCGCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNLLAGV*LIPQSF
Trigger: AAAGCTCTGCGGAATCAGGCAAACGCCTGCCAGCAA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTCATCTGCAAGCCTCTaGAAAGAACCCCAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSSASL*KEPQRE
Trigger: TTCCCGCTGGGGTTCTTTGCAGAGGCTTGCAGATGA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATCCATTTTCTGTCTCTaGAGGTCCTCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTSIFCL*RSSVAS
Trigger: AGATGCCACTGAGGACCTGCAGAGACAGAAAATGGA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCTACTGATCCAGTTCTaGAGATCCCTGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNLLIQF*RSLALL
Trigger: CAGCAAGGCCAGGGATCTGCAGAACTGGATCAGTAG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACCAGCAAGATCTCTATaGCAGTTAAGTCTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTPARSL*QLSLRP
Trigger: TGGCCGAAGACTTAACTGGCATAGAGATCTTGCTGG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGCCATCGACTTCATGTaGAAAGGTCTGGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTAIDFM*KGLVFQ
Trigger: CTGAAACACCAGACCTTTGCACATGAAGTCGATGGC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGTCTTTCAGCTTCTCTaGCATATCCAGCACATTCTG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSVFQLL*HIQHIL
Trigger: CAGAATGTGCTGGATATGGCAGAGAAGCTGAAAGAC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTACAGTAAAATTAGCTaGCCACTCTTATATGAGTAC +
Preference number: 4 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLYSKIS*PLLYEY
Trigger: GTACTCATATAAGAGTGGGCAGCTAATTTTACTGTA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATGGCCTGATCTTTCATaGCCAGCAATGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQWPDLS*PAMSLP
Trigger: AGGCAGAGACATTGCTGGCCATGAAAGATCAGGCCA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAGGAAACTCTGCAGACTaGCATCCAGAGTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQGNSAD*HPECPV
Trigger: AACAGGACACTCTGGATGCCAGTCTGCAGAGTTTCC...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAGCAATTTCTGTCTGTaGACTGCCGAGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESNFCL*TAEASS
Trigger: GCTGGAAGCCTCGGCAGTCCACAGACAGAAATTGCT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGCCCTTCCTCCCTaGATCCACAGCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNIALPP*IHSIQE
Trigger: TTCCTGGATGCTGTGGATCCAGGGAGGAAGGGCTAT...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTAAGGCCTTAATCTGCTaGTCTAGCTCCAGCAAACAT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSKALIC*SSSSKH
Trigger: ATGTTTGCTGGAGCTAGACCAGCAGATTAAGGCCTT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATTGATGTCCTTGGCCTaGATCTGTTGCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQLMSLA*ICCSRL
Trigger: CAACCTGGAGCAACAGATCCAGGCCAAGGACATCAA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAAAGAGGGAGCGGTATTaGTTCTCAATCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQKRERY*FSICSW
Trigger: CCAGGAGCAGATTGAGAACCAATACCGCTCCCTCTT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAATTTCAGGGCTAGCATaGTGCCCACTGTCGATAAGT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTISGLA*CPLSIS
Trigger: ACTTATCGACAGTGGGCACCATGCTAGCCCTGAAAT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATATATCCAGCACATTCTaGATGGCAGGCTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYISSTF*MAGSWA
Trigger: GGCCCATGAGCCTGCCATCCAGAATGTGCTGGATAT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGACGACTGGCCTCATTaGGCTTCTTCCCTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEDDWPH*ASSLCH
Trigger: ATGACAAAGGGAAGAAGCTCAATGAGGCCAGTCGTC...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTGTCCTTCAGGTCAGTaGTCTCGGGAAGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYCPSGQ*SREVSL
Trigger: AAGAGAGACTTCCCGAGATCACTGACCTGAAGGACA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATATGTGTGGCACAGAATaGCACTTGCTCTGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYMCGTE*HLLWGK
Trigger: CTTACCCCAGAGCAAGTGTCATTCTGTGCCACACAT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAACATCTCAAAGTTCTTaGCCTGTCTTGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTTSQSS*PVLPLP
Trigger: AGGAAGAGGCAAGACAGGTCAAGAACTTTGAGATGT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACTTTCTGTTATCTCTTaGATGCGTGGTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTLSVIS*MRGSWL
Trigger: CAGCCATGAACCACGCATTCAAGAGATAACAGAAAG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCATCTGCATCTCGCTTaGAAACTTGTAAGTGATAGG +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSHLHLA*KLVSDR
Trigger: CCTATCACTTACAAGTTTTCAAGCGAGATGCAGATG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATCATGCTTATGCTGCTaGTGCCTGTCCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESCLCC*CLSSRT
Trigger: AGTTCTGCTGGACAGGCATCAGCAGCATAAGCATGA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCATCAGAGGCTTCATaGTTGGCATTCACGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSSEAS*LAFTRS
Trigger: AGACCTCGTGAATGCCAATCATGAAGCCTCTGATGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCAATCTGATCAACGTTaGAAGTCCCGCTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNQSDQR*KSRWRA
Trigger: TGCTCTCCAGCGGGACTTTCAACGTTGATCAGATTG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATCTTGCTGGAAACTCTaGAGACTGGCATCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESCWKL*RLASRV
Trigger: CACTCTGGATGCCAGTCTGCAGAGTTTCCAGCAAGA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAATGATGTCAGATAGGTaGTTCCAGGTCCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQMMSDR*FQVLSS
Trigger: GCTGGAAAGGACCTGGAAGCACCTATCTGACATCAT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCTGATCCATGTTTCTaGTTCATGCAGGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSDPCF*FMQVSQ
Trigger: CTGGCTGACCTGCATGAAGCAGAAACATGGATCAGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGCAGTTTTTCATATCTaGTGGTGGCCAGGGCACGAA +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYAVFHI*WWPGHE
Trigger: TTCGTGCCCTGGCCACCAGCAGATATGAAAAACTGC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTGCATTATTTTCAAATTaGAGCTGCTGGTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSALFSN*SCWLAS
Trigger: TGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGC...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCATACCAAGGACTCTTaGCTTGCCCTTATATCCTTA +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSHTKDS*LALISL
Trigger: TAAGGATATAAGGGCAAGGCAAGAGTCCTTGGTATG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAGACAGCTGGGACAATaGCCTGATGATCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIERQLGQ*PDDQQL
Trigger: AAGCTGCTGATCATCAGGGCATTGTCCCAGCTGTCT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGGTCTAGGATCTTCTTaGGTTTTTCCCAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTGLGSS*VFPKPS
Trigger: AGAAGGCTTGGGAAAAACGCAAGAAGATCCTAGACC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTTCCTGGGCAGTGATTaGTTTGTCCAAATCGTCCCG +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNFLGSD*FVQIVP
Trigger: CGGGACGATTTGGACAAAGCAATCACTGCCCAGGAA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACCAGTTGCTCCTTCATaGCCTCTTCATTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEPVAPS*PLHCHH
Trigger: GTGATGGCAATGAAGAGGCCATGAAGGAGCAACTGG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGGAACTTCTCAAACTTaGGCTCATGTTCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTGTSQT*AHVHPP
Trigger: AGGAGGATGAACATGAGCCCAAGTTTGAGAAGTTCC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTATCTCTTGAATGCGTaGTTCATGGCTGGCAATGTT +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSYLLNA*FMAGNV
Trigger: AACATTGCCAGCCATGAACCACGCATTCAAGAGATA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTCAGCCAGGTACTGCTaGAACTGGACATTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSARYC*NWTLAS
Trigger: TGAAGCCAATGTCCAGTTCCAGCAGTACCTGGCTGA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACCTCGGCACACTCATTaGCATATTGGTTCACTTCAA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTPRHTH*HIGSLQ
Trigger: TTGAAGTGAACCAATATGCCAATGAGTGTGCCGAGG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAGAATATGCTCCCAGCTaGAGACCAGATCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTEYAPS*RPDLLS
Trigger: TGAAAGAAGATCTGGTCTCCAGCTGGGAGCATATTC...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTTCTCAATCTGCTCCTaGCGCTGGGTGATGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYFSICS*RWVMFP
Trigger: AGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATGCAACTCCAGGCACTaGTCTAGGATCTTCTTGCGT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIECNSRH*SRIFLR
Trigger: ACGCAAGAAGATCCTAGACCAGTGCCTGGAGTTGCA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCTGTCTAGTACACGTTaGAGCCGCGTAGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNLSSTR*SRVAIS
Trigger: AGAGATTGCTACGCGGCTCCAACGTGTACTAGACAG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCATCATCTAGATCCTaGAAGAACTGGAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSSSSRS*KNWNKA
Trigger: TGCCTTGTTCCAGTTCTTCCAGGATCTAGATGATGA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATTCTTTGGTAATATATaGCTTGCCCTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEFFGNI*LALCQG
Trigger: GCCCTGGCAGAGGGCAAGTCATATATTACCAAAGAA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATTATTTGCTTCCAGCTaGGATTCCAGAGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTLFASS*DSRVPV
Trigger: AACAGGAACTCTGGAATCTCAGCTGGAAGCAAATAA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATACAATCTTGGTTAGTTaGCGCTTCATCGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNTILVS*RFIAWI
Trigger: GATCCAGGCGATGAAGCGTCAACTAACCAAGATTGT...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCTCGTTCATCCAGCCTaGGAGTTCATCAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYLVHPA*EFIKVR
Trigger: TCTGACTTTGATGAACTCTCAGGCTGGATGAACGAG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAAGTCTTCATGCTTCTaGAGAAGGGCTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYKSSCF*RRASAL
Trigger: CAGTGCAGAAGCCCTTCTTCAGAAGCATGAAGACTT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACTGCCCACTCTTATATaGGTACAGTTCCCAGAAATA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTLPTLI*VQFPEI
Trigger: TATTTCTGGGAACTGTACTCATATAAGAGTGGGCAG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACAAGGTCTGCACCATTaGCATTGGTCTTTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEQGLHH*HWSLGL
Trigger: CAAGCCTAAAGACCAATGGCAATGGTGCAGACCTTG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGAAGTCACCAAGGTCTaGACCATTGCCATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEEVTKV*TIAIGL
Trigger: AAGACCAATGGCAATGGTGCAGACCTTGGTGACTTC...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACAGAGTGTCCTGTTTTaGCAGAAGAGTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEQSVLF*QKSEEV
Trigger: GACTTCCTCACTCTTCTGGCAAAACAGGACACTCTG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACGTGGGTCCATATATTaGTGCATATGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIERGSIY*CICVAQ
Trigger: CTGTGCCACACATATGCAGCAATATATGGACCCACG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTTCAGGGAGACACAGTaGACAGGCTCTGACAAGTTT +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNFRETQ*TGSDKF
Trigger: AAACTTGTCAGAGCCTGTGCACTGTGTCTCCCTGAA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTGGTCTTTCTGCAGCTaGCGAATTTCATTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYWSFCS*RISFRE
Trigger: CTCCCTGAATGAAATTCGGCAGCTGCAGAAAGACCA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCCTCATGGTCTTTCTaGAGCTGCCGAATTTCATTC +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSSWSF*SCRISF
Trigger: GAATGAAATTCGGCAGCTGCAGAAAGACCATGAGGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCCTAAGGCCTTAATCTaGTGGTCTAGCTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNPKALI*WSSSSK
Trigger: TTTGCTGGAGCTAGACCAGCAGATTAAGGCCTTAGG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCTCATACAGTTTTTaGAGAAGCAATGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSSSYSF*RSNDSF
Trigger: GAAGGAGTCATTGCTTCTGCAAAAACTGTATGAGGA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCCTCCAGCCAGCGCTaGAAATCTTCTGCATTATTT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSSSQR*KSSALF
Trigger: AAATAATGCAGAAGATTTGCAGCGCTGGCTGGAGGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACTCCTTCGTGTCATCTaGTTCTCTGTGAAACACTTC +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQLLRVI*FSVKHF
Trigger: GAAGTGTTTCACAGAGAAGCAGATGACACGAAGGAG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATATTCAGGTCCTTGAGTaGATCCTCTCGAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYIQVLE*ILSSQH
Trigger: ATGTTGGCTCGAGAGGATGCACTCAAGGACCTGAAT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATTCGTGGTGTGCAGCTaGCAATTCTTGGACATTCAG +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEFVVCS*QFLDIQ
Trigger: CTGAATGTCCAAGAATTGGCAGCTGCACACCACGAA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACTGCACCATTGCCATTaGTCTTTAGGCTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQLHHCH*SLGLFP
Trigger: AGGAAACAAGCCTAAAGACCAATGGCAATGGTGCAG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCCAGGTCCACAATCTTaGTTAGTTGACGCTTCATCG +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNPGPQS*LVDASS
Trigger: CGATGAAGCGTCAACTAACCAAGATTGTGGACCTGG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTGTTTCCAAAACCTTTaGCCCACTGCTCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYCFQNL*PTALHN
Trigger: GTTGTGGAGAGCAGTGGGCCAAAGGTTTTGGAAACA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTTTCATATCTGCTGGTaGCCAGGGCACGAATATGCT +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNFHICW*PGHEYA
Trigger: AGCATATTCGTGCCCTGGCCACCAGCAGATATGAAA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAGTTTTTCATATCTGCTaGTGGCCAGGGCACGAATAT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQVFHIC*WPGHEY
Trigger: ATATTCGTGCCCTGGCCACCAGCAGATATGAAAAAC...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATTGGCCTCATGCAACTaGGTCCCTTTCTGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQLASCN*VPFCFV
Trigger: TACAAAACAGAAAGGGACCCAGTTGCATGAGGCCAA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTCTGACATAGACAGCTaGGACAATGCCCTGATGATC +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNSDIDS*DNALMI
Trigger: GATCATCAGGGCATTGTCCCAGCTGTCTATGTCAGA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTTAGCCGAGGCTCATTaGTATTCAAATCCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TMALLYSKISCPLLYEYSLAEAH*YSNPFG
Trigger: TCCAAAAGGATTTGAATACCAATGAGCCTCGGCTAA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACCAGAAAGTAAGCCCTaGTTTCCAGGATCCATTGAA +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQPESKP*FPGSIE
Trigger: TTCAATGGATCCTGGAAACCAGGGCTTACTTTCTGG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCTCTCTCCAATAGCTaGTGCTTCTTGAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSLSNS*CFLSRF
Trigger: AAACCTACTCAAGAAGCATCAGCTATTGGAGAGAGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAGAGTTCCTGTTTCTTTaGGCAATGATCCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQEFLFL*AMIHPE
Trigger: TTCTGGATGGATCATTGCTCAAAGAAACAGGAACTC...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAAGACTTGCTGCTTTTaGACCCTGCTCTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEKTCCF*TLLFKF
Trigger: GAACTTGAAGAGCAGGGTTCAAAAGCAGCAAGTCTT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATCATCTGCTTCTCTGTaGAACACTTCAACAGCATGG +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESSASL*NTSTAW
Trigger: CCATGCTGTTGAAGTGTTTCACAGAGAAGCAGATGA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAAGTGTTCATCAGCAATaGGGCTCTCAGCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSVHQQ*GSQQNV
Trigger: AACATTTTGCTGAGAGCCTCATTGCTGATGAACACT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATGACACCCCTCAGCAGTaGCTAGTTGCATACAAAATA +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNDTPQQ*LVAYKI
Trigger: TATTTTGTATGCAACTAGTCACTGCTGAGGGGTGTC...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCGATCCACGAGGAGCTaGTTATTAGTTGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNRSTRS*LLVAKV
Trigger: TACTTTGGCAACTAATAAGCAGCTCCTCGTGGATCG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACAAACATTTAAAGTCTaGTTGAGCCCTAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEQTFKV*LSPSQG
Trigger: TCCCTGGCTAGGGCTCAAGCAGACTTTAAATGTTTG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTTTTCAAATTGCAGCTaGTGGTTGGCCTCATGCAAC +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNFSNCS*WLASCN
Trigger: GTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCTCATCAATCAGTTGTaGTTTGAGAGCCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYLINQL*FESLPP
Trigger: AGGTGGAAGGCTCTCAAAGCACAACTGATTGATGAG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCAATTTTTCGTGGTGTaGAGCTGCCAATTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYQFFVV*SCQFLD
Trigger: GTCCAAGAATTGGCAGCTGCACACCACGAAAAATTG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAAGAGACTCCATATTCTaGTTCAAACTCTTGACCCTA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTRDSIF*FKLLTL
Trigger: TAGGGTCAAGAGTTTGAACCAGAATATGGAGTCTCT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATAGGTACTGCTGGAACTaGACATTGGCTTCAAGATCA +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNRYCWN*TLASRS
Trigger: TGATCTTGAAGCCAATGTCCAGTTCCAGCAGTACCT...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATATGATCTTCTCTTCCTaGGCAGTAAAGGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYMIFSS*AVKASS
Trigger: TGAGGAAGCCTTTACTGCCCAGGAAGAGAAGATCAT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACATCACCAATCAATTTaGTTGCAGTCTTGTCTACAG +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTHHQSI*LQSCLQ
Trigger: CTGTAGACAAGACTGCAACCAAATTGATTGGTGATG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACAAATCAGCTGCAGATaGAGAAGGTCTAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEQISCR*RRSKSF
Trigger: GAAGCTCTTAGACCTTCTCCATCTGCAGCTGATTTG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATTAGACTGGTTGTGTTaGGCAGAAATCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIELDWLC*AEISLS
Trigger: GGACAAACTGATTTCTGCTCAACACAACCAGTCTAA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCAATGGTGCTGTATTTaGTATCAAGGATCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNQWCCI*YQGSER
Trigger: ACGCTCTGATCCTTGATATCAAATACAGCACCATTG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCCAGTTGTTCAAAGCTaGAGCCTTATGTGCAAATTC +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNPVVQS*SLMCKF
Trigger: GAATTTGCACATAAGGCTTCAGCTTTGAACAACTGG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACAATGTTCTCCAGGATaGCTCTATGCCTATTCAGAA +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEQCSPG*LYAYSE
Trigger: TTCTGAATAGGCATAGAGTCATCCTGGAGAACATTG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATTTCCAGTTCAGACATaGGTCTTGATTTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: INVICTQTQAHTHTHTHTFPVQT*VLILFA
Trigger: TGCAAACAAAATCAAGACTCATGTCTGAACTGGAAA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCATTTTGCTTAGACTaGATTAAGGGTAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSFCLD*IKGRSG
Trigger: TCCTGACCTACCCTTAATTCAGTCTAAGCAAAATGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTCACCTTGTCACTCATaGCAGCAAGATTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSPCHS*QQDFSQ
Trigger: TTGAGAGAAATCTTGCTGTCATGAGTGACAAGGTGA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATAGCCTTGATGTTCTCTaGATCATAATGGTCATCACC +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNSLDVL*IIMVIT
Trigger: GGTGATGACCATTATGATTCAGAGAACATCAAGGCT...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATCTGCCTTTTTCTCTTaGATCCATTCCAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESAFFS*IHSSMS
Trigger: AGACATGCTGGAATGGATTCAAGAGAAAAAGGCAGA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTCTTCAAATTTCTTATaGAGAACTTCGGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSSNFL*RTSVRS
Trigger: GGAGCGCACCGAAGTTCTGCATAAGAAATTTGAAGA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCAAGGACTCTTGCCTTaGCCTTATATCCTTAGAATC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYQGLLP*PYILRI
Trigger: GATTCTAAGGATATAAGGGCAAGGCAAGAGTCCTTG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTCTCTACAAATCAGCTaGAGATGGAGAAGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNSLQIS*RWRRSK
Trigger: CTTAGACCTTCTCCATCTGCAGCTGATTTGTAGAGA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAATTGCTGCATATGTGTaGCACAGAATGACACTTGCT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEIAAYV*HRMTLA
Trigger: AGCAAGTGTCATTCTGTGCCACACATATGCAGCAAT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGCTGGAACTGGACATTaGCTTCAAGATCATTTTGTC +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYAGTGH*LQDHFV
Trigger: GACAAAATGATCTTGAAGCCAATGTCCAGTTCCAGC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACCCTCAATCATCTCTTaGCCAGTTTTCTGTATGTTT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQPSIIS*PVFCMF
Trigger: AAACATACAGAAAACTGGCCAAGAGATGATTGAGGG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATTTCATCACTGGACTTaGTGTTTTCTGACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEFHHWT*CFLTPC
Trigger: ACAAGGAGTCAGAAAACATCAAGTCCAGTGATGAAA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTTCTGTTCAAACTCCTaGCACATCTCAAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNFCSNS*HISKFL
Trigger: CAAGAACTTTGAGATGTGTCAGGAGTTTGAACAGAA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR TCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTTTTTCTTCACAATCTaGTCAACGTTGAAAGTCCCG +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNFFFTI*STLKVP
Trigger: CGGGACTTTCAACGTTGATCAGATTGTGAAGAAAAA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTTTTGTTTGCACCTCTaGTTCAAGGGATTGATGCTT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYFCLHL*FKGLML
Trigger: AAGCATCAATCCCTTGAAGCAGAGGTGCAAACAAAA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGTCTTGATTTTGTTTaGACCTCTGCTTCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSLDFV*TSASRD
Trigger: ATCCCTTGAAGCAGAGGTGCAAACAAAATCAAGACT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACTGGGTCTTATTAACTaGCAACTCCTTTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIELGLIN*QLLFKD
Trigger: GTCTTTGAAAAGGAGTTGGCAGTTAATAAGACCCAG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCACAACGGTTTCCTTTaGAAATTGCTCCATTTTTCC +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNHNGFL*KLLHFS
Trigger: GGAAAAATGGAGCAATTTCCAAAGGAAACCGTTGTG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACCCCTGTATATTAGTTaGGTCTTCATAGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEPLYIS*VFIALI
Trigger: GATAAGAGCTATGAAGACCCAACTAATATACAGGGG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATGCTACCAGCTCCACTTaGAAGTCTTCAAATTTCTTA +
Preference number: 4 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNATSST*KSSNFL
Trigger: TAAGAAATTTGAAGACTTCCAAGTGGAGCTGGTAGC...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTCTTTCAATTTTTCGTaGTGTGCAGCTGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSFNFS*CAAANS
Trigger: AGAATTGGCAGCTGCACACCACGAAAAATTGAAAGA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAACCAATCAATTTGGTTaGAGTCTTGTCTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQTNQFG*SLVYSY
Trigger: ATAACTGTAGACAAGACTGCAACCAAATTGATTGGT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR GCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATCATCAAACTTTTTCTaGAGCTCCCAAACATCATCT +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESSNFF*SSQTSS
Trigger: AGATGATGTTTGGGAGCTGCAGAAAAAGTTTGATGA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATATTCAGAAGCTTTTTaGAAGCAATCAGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEYSEAF*KQSGPF
Trigger: GAAAGGACCTGATTGCTTCCAAAAAGCTTCTGAATA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CCA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATTGTTTTAGGTTaGCATAGTCTCCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYRIVLG*HSLQAL
Trigger: CAAAGCTTGGAGACTATGCCAACCTAAAACAATTCT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp CCAAGAGGGAGCGGTATTGGTTCTCAATCTGCTCCTGGCGCTGGGTaGTGTTTCCTGGCTCTTCTCGTCGCCGCTGTGGGAGCATCGGGA +
Preference number: 5 (lower is better)
Translates to: PRGSGIGSQSAPGAG*CFLALLVAAVGASG
Trigger: TCCCGATGCTCCCACAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAACCAATACCGCTCCCTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp CTCCTGGCGCTGGGTGATGTTTCCTGGCTCTTCTCGTCGCCGCTGTaGGAGCATCGGGAACTCATCGTGGGCCAGTCTTCTGACATAGAC +
Preference number: 5 (lower is better)
Translates to: LLALGDVSWLFSSPL*EHRELIVGQSSDID
Trigger: GTCTATGTCAGAAGACTGGCCCACGATGAGTTCCCGATGCTCCCACAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp GATCCTGACGAGCAGCCACAGCCGACTCCAGGAGGCCGTGTTTCCTaGGTCGATTCTGTACCTCGGCCAGGCCTTTCCCATAATCCTCAG +
Preference number: 5 (lower is better)
Translates to: DPDEQPQPTPGGRVS*VDSVPRPGLSHNPQ
Trigger: CTGAGGATTATGGGAAAGGCCTGGCCGAGGTACAGAATCGACTCAGGAAACACGGCCTCCTGGAGTCGGCTGTGGCTGCTCGTCAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp GCACACTCCTGTACATACTGCTGGAACTTCAGGGCCCGCAGCAACTaGTCACCCTTCTCCAGGGTCAGCTCTAACAGCAGGTCCCACAGG +
Preference number: 5 (lower is better)
Translates to: AHSCTYCWNFRARSN*SPFSRVSSNSRSHR
Trigger: CCTGTGGGACCTGCTGTTAGAGCTGACCCTGGAGAAGGGTGACCAGTTGCTGCGGGCCCTGAAGTTCCAGCAGTATGTACAGGAGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp GCGGTATTGGTTCTCAATCTGCTCCTGGCGCTGGGTGATGTTTCCTaGCTCTTCTCGTCGCCGCTGTGGGAGCATCGGGAACTCATCGTG +
Preference number: 5 (lower is better)
Translates to: AVLVLNLLLALGDVS*LFSSPLWEHRELIV
Trigger: CACGATGAGTTCCCGATGCTCCCACAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAACCAATACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp CGATCCAAGAGGGAGCGGTATTGGTTCTCAATCTGCTCCTGGCGCTaGGTGATGTTTCCTGGCTCTTCTCGTCGCCGCTGTGGGAGCATC +
Preference number: 5 (lower is better)
Translates to: RSKRERYWFSICSWR*VMFPGSSRRRCGSI
Trigger: GATGCTCCCACAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAACCAATACCGCTCCCTCTTGGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp GTCGCCGCTGTGGGAGCATCGGGAACTCATCGTGGGCCAGTCTTCTaGCATAGACAGCTGGGACAATGCCCTGATGATCAGCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: VAAVGASGTHRGPVF*HRQLGQCPDDQQLP
Trigger: TGGAAGCTGCTGATCATCAGGGCATTGTCCCAGCTGTCTATGTCAGAAGACTGGCCCACGATGAGTTCCCGATGCTCCCACAGCGGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp CACTTCAACAGCATGGGCACTGCCCAGCAGCTGCCGCTGTTCATCTaGAAGCCTCTGCAAAGAACCCCAGCGGGAATTCAATTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: HFNSMGTAQQLPLFI*KPLQRTPAGIQFLP
Trigger: CGGCAGGAATTGAATTCCCGCTGGGGTTCTTTGCAGAGGCTTGCAGATGAACAGCGGCAGCTGCTGGGCAGTGCCCATGCTGTTGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp TGGTCACCCTTCTCCAGGGTCAGCTCTAACAGCAGGTCCCACAGGTaGCGTAGCTCCTCTATATGGGCCTTCGTTTCTTCGTGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: WSPFSRVSSNSRSHR*RSSSIWAFVSSWAE
Trigger: TTCTGCCCACGAAGAAACGAAGGCCCATATAGAGGAGCTACGCCACCTGTGGGACCTGCTGTTAGAGCTGACCCTGGAGAAGGGTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp CAAGCGCTACACTCAATCAGGGAGTTCCCCAGGTTGATGACGCCATaGACCTGCTCAGATCGGCCATCGACTTCATGTGCAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QALHSIREFPRLMTP*TCSDRPSTSCAKVW
Trigger: CCAGACCTTTGCACATGAAGTCGATGGCCGATCTGAGCAGGTGCATGGCGTCATCAACCTGGGGAACTCCCTGATTGAGTGTAGCGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS GCA 90 bp CCCTTAGTTAAGGTCCTAACACCTAACACCACCTGCATCCCTCCCTaGTCTGGCCACACGCCCTCAATACTTGGCCTGGATCTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: PLVKVLTPNTTCIPP*SGHTPSILGLDLLL
Trigger: GAGCAACAGATCCAGGCCAAGTATTGAGGGCGTGTGGCCAGAGCAGGGAGGGATGCAGGTGGTGTTAGGTGTTAGGACCTTAACTAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492934.1
CDS GCA 90 bp ACCAAACTCTCGCCCTTAGTTAAGGTCCTAACACCTAACACCACCTaGATCCCTCCCTGCTCTGGCCACACGCCCTCAATACTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: TKLSPLVKVLTPNTT*IPPCSGHTPSILGL
Trigger: CAGGCCAAGTATTGAGGGCGTGTGGCCAGAGCAGGGAGGGATGCAGGTGGTGTTAGGTGTTAGGACCTTAACTAAGGGCGAGAGTTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492934.1
CDS GCA 90 bp GCCCTAGCCAGGGAGGCCAAGAAGTCCTCATGGTCTTTCTGCAGCTaGCGAATTTCATTCAGGGAGACACAGTGCACAGGCTCTGACAAG +
Preference number: 5 (lower is better)
Translates to: ALAREAKKSSWSFCS*RISFRETQCTGSDK
Trigger: CTTGTCAGAGCCTGTGCACTGTGTCTCCCTGAATGAAATTCGGCAGCTGCAGAAAGACCATGAGGACTTCTTGGCCTCCCTGGCTAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS CCA 90 bp GAGCATCGGGAACTCATCGTGGGCCAGTCTTCTGACATAGACAGCTaGGACAATGCCCTGATGATCAGCAGCTTCCACCTTCCACCAGTC +
Preference number: 5 (lower is better)
Translates to: EHRELIVGQSSDIDS*DNALMISSFHLPPV
Trigger: GACTGGTGGAAGGTGGAAGCTGCTGATCATCAGGGCATTGTCCCAGCTGTCTATGTCAGAAGACTGGCCCACGATGAGTTCCCGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp ACTTGGGCTCATGTTCATCCTCCTCCACCATGGGCAAGTAGTAATTaGGTCCTCTCAGGCAGGACCGGAACTCTTTGTGAGTCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: TWAHVHPPPPWASSN*VLSGRTGTLCESGA
Trigger: GGCGCCTGACTCACAAAGAGTTCCGGTCCTGCCTGAGAGGACTCAATTACTACTTGCCCATGGTGGAGGAGGATGAACATGAGCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481212.5
ENST00000498708.1
ENST00000643759.2
CDS TCA 90 bp GTCGATTCTGTACCTCGGCCAGGCCTTTCCCATAATCCTCAGAGGTaGCTTGCCACTCAACATCCTCCAGCCAGCGCTGCAAATCTTCTG +
Preference number: 5 (lower is better)
Translates to: VDSVPRPGLSHNPQR*LATQHPPASAANLL
Trigger: CAGAAGATTTGCAGCGCTGGCTGGAGGATGTTGAGTGGCAAGTCACCTCTGAGGATTATGGGAAAGGCCTGGCCGAGGTACAGAATCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp TCTCCAATCCACTCTAAGATGTCAGCACACTCCTGTACATACTGCTaGAACTTCAGGGCCCGCAGCAACTGGTCACCCTTCTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SPIHSKMSAHSCTYC*NFRARSNWSPFSRV
Trigger: GACCCTGGAGAAGGGTGACCAGTTGCTGCGGGCCCTGAAGTTCCAGCAGTATGTACAGGAGTGTGCTGACATCTTAGAGTGGATTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp GATAGGAATCCTCAAGCTTCTGACCCCTCTCAGCGACCCGCTCCTTaGAACTTTGATACCGAGTCAACACTTCCTGACGCCTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: DRNPQASDPSQRPAP*NFDTESTLPDASPG
Trigger: TCCAGGAGAGGCGTCAGGAAGTGTTGACTCGGTATCAAAGTTTCAAGGAGCGGGTCGCTGAGAGGGGTCAGAAGCTTGAGGATTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp TCTGACCTCAGGGAATTCTCACGTGCCACCATCCAGCTCTCAACTTaGTCACAGTTCCCCTGGAACATCTGCAACTCCAGGCACTGGTCT +
Preference number: 5 (lower is better)
Translates to: SDLREFSRATIQLST*SQFPWNICNSRHWS
Trigger: AGACCAGTGCCTGGAGTTGCAGATGTTCCAGGGGAACTGTGATCAAGTTGAGAGCTGGATGGTGGCACGTGAGAATTCCCTGAGGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp CTACACTCAATCAGGGAGTTCCCCAGGTTGATGACGCCATGCACCTaGTCAGATCGGCCATCGACTTCATGTGCAAAGGTCTGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: LHSIREFPRLMTPCT*SDRPSTSCAKVWCF
Trigger: GAAACACCAGACCTTTGCACATGAAGTCGATGGCCGATCTGAGCAGGTGCATGGCGTCATCAACCTGGGGAACTCCCTGATTGAGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS GCA 90 bp TTGTCTCCAATCCACTCTAAGATGTCAGCACACTCCTGTACATACTaGTGGAACTTCAGGGCCCGCAGCAACTGGTCACCCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LSPIHSKMSAHSCTY*WNFRARSNWSPFSR
Trigger: CCTGGAGAAGGGTGACCAGTTGCTGCGGGCCCTGAAGTTCCAGCAGTATGTACAGGAGTGTGCTGACATCTTAGAGTGGATTGGAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp TCGTGTCATCTGCTTCTCTGTGAAACACTTCAACAGCATGGGCACTaGCCAGCAGCTGCCGCTGTTCATCTGCAAGCCTCTGCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: SCHLLLCETLQQHGH*PAAAAVHLQASAKN
Trigger: GTTCTTTGCAGAGGCTTGCAGATGAACAGCGGCAGCTGCTGGGCAGTGCCCATGCTGTTGAAGTGTTTCACAGAGAAGCAGATGACACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp TTCTGGGCCTCATTTAGGCTCTCCTTACGATCCTTTGTACGCCCCTaGAGGTCTTCCCAGGCCTCATTCAGCTCCATTTTCTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FWASFRLSLRSFVRP*RSSQASFSSIFCLC
Trigger: GCAGAGACAGAAAATGGAGCTGAATGAGGCCTGGGAAGACCTGCAGGGGCGTACAAAGGATCGTAAGGAGAGCCTAAATGAGGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp CCATGTCAGCACGGTGCTCCTGATGTCTCTCCAGCAAGATCTCTATaGCAGTTAAGTCTTCGGCCAGCTCCTGTGATGATACCATGCCAC +
Preference number: 5 (lower is better)
Translates to: PCQHGAPDVSPARSL*QLSLRPAPVMIPCH
Trigger: GTGGCATGGTATCATCACAGGAGCTGGCCGAAGACTTAACTGGCATAGAGATCTTGCTGGAGAGACATCAGGAGCACCGTGCTGACATGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp CCTCCAGCAACTCCTCCCAGAGGCTGGCAACTTCACTCAGACGAGTaGTCACATTGTCAGAGGCATAGTGACCACCCTCAATCATCTCTT +
Preference number: 5 (lower is better)
Translates to: PPATPPRGWQLHSDE*SHCQRHSDHPQSSL
Trigger: AAGAGATGATTGAGGGTGGTCACTATGCCTCTGACAATGTGACCACTCGTCTGAGTGAAGTTGCCAGCCTCTGGGAGGAGTTGCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTGGTGCAGCCTGTTGTaGCTGGCAGGCGTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLWCSLL*LAGVCL
Trigger: CAGGCAAACGCCTGCCAGCAACAACAGGCTGCACCA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp TCGACCCCGTGGGTCCATATATTGCTGCATATGTGTGGCACAGAATaGCACTTGCTCTGGGGTAAGGGCCAGTGGTTACACTGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: STPWVHILLHMCGTE*HLLWGKGQWLHCQK
Trigger: TTTCTGGCAGTGTAACCACTGGCCCTTACCCCAGAGCAAGTGTCATTCTGTGCCACACATATGCAGCAATATATGGACCCACGGGGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485680.1
CDS TCA 90 bp TCCTTGAGTGCATCCTCTCGAGCCAACATCTCTCTCTCCAATAGCTaGTGCTTCTTGAGTAGGTTTCCTGCTGAAGCCAAGTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SLSASSRANISLSNS*CFLSRFPAEAKSLA
Trigger: GGCCAGGGACTTGGCTTCAGCAGGAAACCTACTCAAGAAGCATCAGCTATTGGAGAGAGAGATGTTGGCTCGAGAGGATGCACTCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp TCCTTCAGGTCAGTGATCTCGGGAAGTCTCTCTTGCTGGAAACTCTaGAGACTGGCATCCAGAGTGTCCTGTTTTGCCAGAAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: SFRSVISGSLSCWKL*RLASRVSCFARRVR
Trigger: CCTCACTCTTCTGGCAAAACAGGACACTCTGGATGCCAGTCTGCAGAGTTTCCAGCAAGAGAGACTTCCCGAGATCACTGACCTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTGCCCCACAGCAGCCTaGTCTTTCAGCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLCPTAA*SFSFSA
Trigger: GGCAGAGAAGCTGAAAGACAAGGCTGCTGTGGGGCA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp CCAACACTACTTACCTCTCGAGCCAACATCTCTCTCTCCAATAGCTaGTGCTTCTTGAGTAGGTTTCCTGCTGAAGCCAAGTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PTLLTSRANISLSNS*CFLSRFPAEAKSLA
Trigger: GGCCAGGGACTTGGCTTCAGCAGGAAACCTACTCAAGAAGCATCAGCTATTGGAGAGAGAGATGTTGGCTCGAGAGGTAAGTAGTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465741.1
CDS TCA 90 bp CCACGAAGGCGCTCCCAGGCAGCATTCACCTCATTTTGCTTAGACTaGATTAAGGGTAGGTCAGGATGGTTTTCCTCGGCACACTCATTG +
Preference number: 5 (lower is better)
Translates to: PRRRSQAAFTSFCLD*IKGRSGWFSSAHSL
Trigger: CAATGAGTGTGCCGAGGAAAACCATCCTGACCTACCCTTAATTCAGTCTAAGCAAAATGAGGTGAATGCTGCCTGGGAGCGCCTTCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp TCGACCCCGTGGGTCCATATATTGCTGCATATGTGTGGCACAGAATaGCACTTGCTCTGGGGTAAGGGCCTGCTTCATGTCTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: STPWVHILLHMCGTE*HLLWGKGLLHVFFG
Trigger: ACCAAAGAAGACATGAAGCAGGCCCTTACCCCAGAGCAAGTGTCATTCTGTGCCACACATATGCAGCAATATATGGACCCACGGGGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp TTGAATCGTTGTAAGTTTGCAGCATTGGACAGAGCTTTCTGTCTCTaGAGAGCCAAACCACGAAGGCGCTCCCAGGCAGCATTCACCTCA +
Preference number: 5 (lower is better)
Translates to: LNRCKFAALDRAFCL*RAKPRRRSQAAFTS
Trigger: TGAGGTGAATGCTGCCTGGGAGCGCCTTCGTGGTTTGGCTCTCCAGAGACAGAAAGCTCTGTCCAATGCTGCAAACTTACAACGATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp GTTTTTCATATCTGCTGGTGGCCAGGGCACGAATATGCTCCCAGCTaGAGACCAGATCTTCTTTCATCTCCTGGATCTGAGGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: VFHICWWPGHEYAPS*RPDLLSSPGSEVHL
Trigger: CAGATGCACCTCAGATCCAGGAGATGAAAGAAGATCTGGTCTCCAGCTGGGAGCATATTCGTGCCCTGGCCACCAGCAGATATGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp CATCCTCTCGAGCCAACATCTCTCTCTCCAATAGCTGATGCTTCTTaGGTAGGTTTCCTGCTGAAGCCAAGTCCCTGGCCTGATCTTTCA +
Preference number: 5 (lower is better)
Translates to: HPLEPTSLSPIADAS*VGFLLKPSPWPDLS
Trigger: TGAAAGATCAGGCCAGGGACTTGGCTTCAGCAGGAAACCTACTCAAGAAGCATCAGCTATTGGAGAGAGAGATGTTGGCTCGAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp GAAATCAGTTTGTCCTTCAGGTCAGTGATCTCGGGAAGTCTCTCTTaGTGGAAACTCTGCAGACTGGCATCCAGAGTGTCCTGTTTTGCC +
Preference number: 5 (lower is better)
Translates to: EISLSFRSVISGSLS*WKLCRLASRVSCFA
Trigger: GGCAAAACAGGACACTCTGGATGCCAGTCTGCAGAGTTTCCAGCAAGAGAGACTTCCCGAGATCACTGACCTGAAGGACAAACTGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS GCA 90 bp GTTGATGACGCCATGCACCTGCTCAGATCGGCCATCGACTTCATGTaGAAAGGTCTGGTGTTTCAGGTATTTCCTCTGAATGTTAGTGGC +
Preference number: 5 (lower is better)
Translates to: VDDAMHLLRSAIDFM*KGLVFQVFPLNVSG
Trigger: GCCACTAACATTCAGAGGAAATACCTGAAACACCAGACCTTTGCACATGAAGTCGATGGCCGATCTGAGCAGGTGCATGGCGTCATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp TCATTTTGTCGCCTAGCAGCTCGAGCACGGAGAGACTCCATATTCTaGTTCAAACTCTTGACCCTAGAGGCCACATCTTCTGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SFCRLAARARRDSIF*FKLLTLEATSSAAK
Trigger: CTTTGCTGCAGAAGATGTGGCCTCTAGGGTCAAGAGTTTGAACCAGAATATGGAGTCTCTCCGTGCTCGAGCTGCTAGGCGACAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643759.2
ENST00000647256.1
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCTCGGGAAGTCTCTCTaGCTGGAAACTCTGCAGACT +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLLGKSL*LETLQT
Trigger: AGTCTGCAGAGTTTCCAGCAAGAGAGACTTCCCGAG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTTAAGTCCTCGGGCCTaGGCCAACTCTTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLLSPRA*ANSLSF
Trigger: GAAGCTCAAAGAGTTGGCCAAGGCCCGAGGACTTAA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp GAGAGCCAGAACTCAAAGTCCCGGATGCTTGTGTTGAACCTCTGTTaGCGACTGGCCTCATTGAGCTTCTTCCCTTTGTCATTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: ESQNSKSRMLVLNLC*RLASLSFFPLSFVL
Trigger: GAGAACAAATGACAAAGGGAAGAAGCTCAATGAGGCCAGTCGTCAACAGAGGTTCAACACAAGCATCCGGGACTTTGAGTTCTGGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS TCA 90 bp TTACCTCTCGAGCCAACATCTCTCTCTCCAATAGCTGATGCTTCTTaGGTAGGTTTCCTGCTGAAGCCAAGTCCCTGGCCTGATCTTTCA +
Preference number: 5 (lower is better)
Translates to: LPLEPTSLSPIADAS*VGFLLKPSPWPDLS
Trigger: TGAAAGATCAGGCCAGGGACTTGGCTTCAGCAGGAAACCTACTCAAGAAGCATCAGCTATTGGAGAGAGAGATGTTGGCTCGAGAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465741.1
CDS GCA 90 bp TCCAGCCAGCGCTGCAAATCTTCTGCATTATTTTCAAATTGCAGCTaGTGGTTGGCCTCATGCAACTGGGTCCCTTTCTGTTTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: SSQRCKSSALFSNCS*WLASCNWVPFCFVA
Trigger: GGCTACAAAACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGCAGAAGATTTGCAGCGCTGGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp TCTCTGATCCATGTTTCTGCTTCATGCAGGTCAGCCAGGTACTGCTaGAACTGGACATTGGCTTCAAGATCATTTTGTCGCCTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: SLIHVSASCRSARYC*NWTLASRSFCRLAA
Trigger: AGCTGCTAGGCGACAAAATGATCTTGAAGCCAATGTCCAGTTCCAGCAGTACCTGGCTGACCTGCATGAAGCAGAAACATGGATCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643759.2
ENST00000647256.1
CDS CCA 90 bp AGCCAGCGCTGCAAATCTTCTGCATTATTTTCAAATTGCAGCTGCTaGTTGGCCTCATGCAACTGGGTCCCTTTCTGTTTTGTAGCCTCC +
Preference number: 5 (lower is better)
Translates to: SQRCKSSALFSNCSC*LASCNWVPFCFVAS
Trigger: GGAGGCTACAAAACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGCAGAAGATTTGCAGCGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp AAATCAGCTGCAGATGGAGAAGGTCTAAGAGCTTCTTCTTTCGGGTaGCCAGTGGCTCTTTCAGAGCTTCAAATCGGCATACCAAGGACT +
Preference number: 5 (lower is better)
Translates to: KSAADGEGLRASSFG*PVALSELQIGIPRT
Trigger: AGTCCTTGGTATGCCGATTTGAAGCTCTGAAAGAGCCACTGGCCACCCGAAAGAAGAAGCTCTTAGACCTTCTCCATCTGCAGCTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTTGGTAATATATGACTaGCCCTCTGCCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLLVIYD*PSARAW
Trigger: CCAAGCCCTGGCAGAGGGCAAGTCATATATTACCAA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTCATCAGCTACCTTGTaGATATCCCTTAGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLSSATL*ISLSRG
Trigger: GCCTCGGCTAAGGGATATCAACAAGGTAGCTGATGA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCATCCAGCTCTCAACTaGATCACAGTTCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLHPALN*ITVPLE
Trigger: TTCCAGGGGAACTGTGATCAAGTTGAGAGCTGGATG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCCGCTCATCAATCAGTaGTGCTTTGAGAGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLPLINQ*CFESLP
Trigger: TGGAAGGCTCTCAAAGCACAACTGATTGATGAGCGG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp GCCTCATTGAGCTTCTTCCCTTTGTCATTTGTTCTCTCAAGCAGATaGTCCCAATGTTCCTTCAGCTGTTCCAGTTGCTCCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: ASLSFFPLSFVLSSR*SQCSFSCSSCSFMA
Trigger: GGCCATGAAGGAGCAACTGGAACAGCTGAAGGAACATTGGGATCATCTGCTTGAGAGAACAAATGACAAAGGGAAGAAGCTCAATGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS GCA 90 bp CCTTCTTTAGCTACCAGCTCCACTTGGAAGTCTTCAAATTTCTTATaGAGAACTTCGGTGCGCTCCCAGTCTTCACCTAGCTCCACTGAT +
Preference number: 5 (lower is better)
Translates to: PSLATSSTWKSSNFL*RTSVRSQSSPSSTD
Trigger: ATCAGTGGAGCTAGGTGAAGACTGGGAGCGCACCGAAGTTCTGCATAAGAAATTTGAAGACTTCCAAGTGGAGCTGGTAGCTAAAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp ACATCCTCCAGCCAGCGCTGCAAATCTTCTGCATTATTTTCAAATTaGAGCTGCTGGTTGGCCTCATGCAACTGGGTCCCTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: TSSSQRCKSSALFSN*SCWLASCNWVPFCF
Trigger: AAAACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGCAGAAGATTTGCAGCGCTGGCTGGAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTTCTGGTTCAAACTCTaGACCCTAGAGGCCACATCT +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLFWFKL*TLEATS
Trigger: AGATGTGGCCTCTAGGGTCAAGAGTTTGAACCAGAA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCAACTGGATCTCCTCTaGCCCCACAGCAGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSQLDLL*PHSSLV
Trigger: GACAAGGCTGCTGTGGGGCAAGAGGAGATCCAGTTG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp TCATGGTCTTTCTGCAGCTGCCGAATTTCATTCAGGGAGACACAGTaGACAGGCTCTGACAAGTTTTCTTCCATCTTTTCACACCAGTTG +
Preference number: 5 (lower is better)
Translates to: SWSFCSCRISFRETQ*TGSDKFSSIFSHQL
Trigger: CAACTGGTGTGAAAAGATGGAAGAAAACTTGTCAGAGCCTGTGCACTGTGTCTCCCTGAATGAAATTCGGCAGCTGCAGAAAGACCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS GCA 90 bp GCCAGTGGCTCTTTCAGAGCTTCAAATCGGCATACCAAGGACTCTTaGCTTGCCCTTATATCCTTAGAATCAGGATGGCCTATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ASGSFRASNRHTKDS*LALISLESGWPISS
Trigger: TGAAGAAATAGGCCATCCTGATTCTAAGGATATAAGGGCAAGGCAAGAGTCCTTGGTATGCCGATTTGAAGCTCTGAAAGAGCCACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAAGGGAGTTCCCCAGGTaGATGACGCCATGCACCTGC +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQREFPR*MTPCTC
Trigger: GCAGGTGCATGGCGTCATCAACCTGGGGAACTCCCT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTAATTGCAGCTGCTGGTaGGCCTCATGCAACTGGGTC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSNCSCW*ASCNWV
Trigger: GACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp GTTAGTATTATCTACAATAGGTTCCTTCTCTCTGATCCATGTTTCTaGTTCATGCAGGTCAGCCAGGTACTGCTGGAACTGGACATTGGC +
Preference number: 5 (lower is better)
Translates to: VSIIYNRFLLSDPCF*FMQVSQVLLELDIG
Trigger: GCCAATGTCCAGTTCCAGCAGTACCTGGCTGACCTGCATGAAGCAGAAACATGGATCAGAGAGAAGGAACCTATTGTAGATAATACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643759.2
ENST00000647256.1
CDS CCA 90 bp GACTCCAATAAGTTAGCGTGTGGGTGGGTGGCTCCAGATAGTGTCTaGAAGACCACATCATTTTCTTTTTGTAACAGCTTTGTCGAGGTA +
Preference number: 5 (lower is better)
Translates to: DSNKLACGWVAPDSV*KTTSFSFCNSFVEV
Trigger: TACCTCGACAAAGCTGTTACAAAAAGAAAATGATGTGGTCTTCCAGACACTATCTGGAGCCACCCACCCACACGCTAACTTATTGGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485680.1
CDS CCA 90 bp TCCATTCTTCCAGCTCCTCAAGGTCTCGGTAGAATTGTTTTAGGTTaGCATAGTCTCCAAGCTTTGTCCGCTCATCAATCAGTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SILPAPQGLGRIVLG*HSLQALSAHQSVVL
Trigger: AAGCACAACTGATTGATGAGCGGACAAAGCTTGGAGACTATGCCAACCTAAAACAATTCTACCGAGACCTTGAGGAGCTGGAAGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTATCTGTTGCTCCAGGTaGTGTTGCATCCGCAACCCA +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSICCSR*CCIRNP
Trigger: TGGGTTGCGGATGCAACACAACCTGGAGCAACAGAT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTACATTTAAAGTCTGCTaGAGCCCTAGCCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSTFKVC*SPSQGG
Trigger: GCCTCCCTGGCTAGGGCTCAAGCAGACTTTAAATGT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTAGTCTCATCAGCAGATaGAAATCGGTCATCGTAAGA +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLSLISR*KSVIVR
Trigger: TCTTACGATGACCGATTTCAATCTGCTGATGAGACT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACACTGGTGCAGCCTGTaGTTGCTGGCAGGCGTTTGC +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEHWCSL*LLAGVC
Trigger: GCAAACGCCTGCCAGCAACAACAGGCTGCACCAGTG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp CTGAAAGGCATAATCGTCTTCCAATTGCAACTTCCAAGCAGCTATTaGCTTAGCCAGAGAAGGGGTCTTTTCATTCAGAGCCTCTATCTT +
Preference number: 5 (lower is better)
Translates to: LKGIIVFQLQLPSSY*LSQRRGLFIQSLYL
Trigger: AAGATAGAGGCTCTGAATGAAAAGACCCCTTCTCTGGCTAAGGCAATAGCTGCTTGGAAGTTGCAATTGGAAGACGATTATGCCTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS GCA 90 bp TGCCAGAAAGTGGTAGAGCTGGGACTTGAACCTATGATCCTCTTATaGCAAAGAGTTCCTCTATTCACTGTGCTGTTTGATTACCAAGTG +
Preference number: 5 (lower is better)
Translates to: CQKVVELGLEPMILL*QRVPLFTVLFDYQV
Trigger: CACTTGGTAATCAAACAGCACAGTGAATAGAGGAACTCTTTGGCATAAGAGGATCATAGGTTCAAGTCCCAGCTCTACCACTTTCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485680.1
CDS GCA 90 bp CATAGGCCAATAAAAATTCATTATAACGTTGCAATAGACGACGTCTaGGTTCTTCTGCCCGATCCAAGAGGGAGCGGTATTGGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: HRPIKIHYNVAIDDV*VLLPDPRGSGIGSQ
Trigger: TTGAGAACCAATACCGCTCCCTCTTGGATCGGGCAGAAGAACGCAGACGTCGTCTATTGCAACGTTATAATGAATTTTTATTGGCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp GAAGAACTGGAACAAGGCATAGGCCTCTTTCAATTTTTCGTGGTGTaGAGCTGCCAATTCTTGGACATTCAGGAAACGCTTGTTGACATT +
Preference number: 5 (lower is better)
Translates to: EELEQGIGLFQFFVV*SCQFLDIQETLVDI
Trigger: AATGTCAACAAGCGTTTCCTGAATGTCCAAGAATTGGCAGCTGCACACCACGAAAAATTGAAAGAGGCCTATGCCTTGTTCCAGTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTTTAGACTGGTTGTGTaGAGCAGAAATCAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLFRLVV*SRNQFV
Trigger: GACAAACTGATTTCTGCTCAACACAACCAGTCTAAA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTATTTCATCACTGGACTaGATGTTTTCTGACTCCTTG +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLISSLD*MFSDSL
Trigger: CAAGGAGTCAGAAAACATCAAGTCCAGTGATGAAAT...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAGGCAGCTCATCAGCATaGATCGCAGCAGTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQGSSSA*IAAVFS
Trigger: CGAGAAGACTGCTGCGATCAATGCTGATGAGCTGCC...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTCACCAATCAATTTGGTaGCAGTCTTGTCTACAGTTA +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLHQSIW*QSCLQL
Trigger: TAACTGTAGACAAGACTGCAACCAAATTGATTGGTG...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGTTGCTGGCAGGCGTTaGCCTGATTCCGCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYVAGRR*PDSAEL
Trigger: AAGCTCTGCGGAATCAGGCAAACGCCTGCCAGCAAC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTGGGCAGTGATTGCTTaGTCCAAATCGTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSWAVIA*SKSSRF
Trigger: GAAACGGGACGATTTGGACAAAGCAATCACTGCCCA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 90 bp TTTCCTTATCAGCTATCCAAGCCTCTACCACATCAGCCTTCCAGTTaGATTCCTGAAAGGCATAATCGTCTTCCAATTGCAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: FPYQLSKPLPHQPSS*IPERHNRLPIATSK
Trigger: CTTGGAAGTTGCAATTGGAAGACGATTATGCCTTTCAGGAATTCAACTGGAAGGCTGATGTGGTAGAGGCTTGGATAGCTGATAAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS GCA 90 bp CTGGAACAAGGCATAGGCCTCTTTCAATTTTTCGTGGTGTGCAGCTaGCAATTCTTGGACATTCAGGAAACGCTTGTTGACATTATCTTT +
Preference number: 5 (lower is better)
Translates to: LEQGIGLFQFFVVCS*QFLDIQETLVDIIF
Trigger: AAAGATAATGTCAACAAGCGTTTCCTGAATGTCCAAGAATTGGCAGCTGCACACCACGAAAAATTGAAAGAGGCCTATGCCTTGTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp AGGATGTCTTCTCCTTGTGCACACACATTTTGTACTCGGGTCTCATaGACAGCAAAGTCATTTTCCAAAGCTTCATGCTTCATTAGCAAG +
Preference number: 5 (lower is better)
Translates to: RMSSPCAHTFCTRVS*TAKSFSKASCFISK
Trigger: CTTGCTAATGAAGCATGAAGCTTTGGAAAATGACTTTGCTGTCCATGAGACCCGAGTACAAAATGTGTGTGCACAAGGAGAAGACATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CCA 90 bp CAAGTATTTCCATCTTTTCCCGAACTTCATCAGAGGCTTCATGATTaGCATTCACGAGGTCTTGACCAGTCTCATCAGCAGATTGAAATC +
Preference number: 5 (lower is better)
Translates to: QVFPSFPELHQRLHD*HSRGLDQSHQQIEI
Trigger: GATTTCAATCTGCTGATGAGACTGGTCAAGACCTCGTGAATGCCAATCATGAAGCCTCTGATGAAGTTCGGGAAAAGATGGAAATACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp CATACCAAGGACTCTTGCCTTGCCCTTATATCCTTAGAATCAGGATaGCCTATTTCTTCAAAATATGCAGCCAGGTCTGTAAGGATATCC +
Preference number: 5 (lower is better)
Translates to: HTKDSCLALISLESG*PISSKYAARSVRIS
Trigger: GGATATCCTTACAGACCTGGCTGCATATTTTGAAGAAATAGGCCATCCTGATTCTAAGGATATAAGGGCAAGGCAAGAGTCCTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATTCATGGCCTCTTCATaGCCATCACAAGCGCTACAC +
Preference number: 5 (lower is better)
Translates to: INVICTQTQAHTHTHTHTFMASS*PSQALH
Trigger: GTGTAGCGCTTGTGATGGCAATGAAGAGGCCATGAA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCTGCACCATTGCCATaGGTCTTTAGGCTTGTTTCC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSSAPLP*VFRLVS
Trigger: GGAAACAAGCCTAAAGACCAATGGCAATGGTGCAGA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGCCCTCTGCCAGGGCTaGGAAGGCATTCTCTATTTC +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYALCQG*EGILYF
Trigger: GAAATAGAGAATGCCTTCCAAGCCCTGGCAGAGGGC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAGAGCGTCTTCCAAGTaGTCCCCCAGGTCCACAATC +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIERASSK*SPRSTI
Trigger: GATTGTGGACCTGGGGGACAACTTGGAAGACGCTCT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAACACCTTTGATGTCCTaGGCCTGGATCTGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQTPLMS*AWICCS
Trigger: GGAGCAACAGATCCAGGCCAAGGACATCAAAGGTGT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACTGTTTCCAAAACCTTaGGCCCACTGCTCTCCACAA +
Preference number: 5 (lower is better)
Translates to: INVICTQTQAHTHTHTHTLFPKP*AHCSPQ
Trigger: TTGTGGAGAGCAGTGGGCCAAAGGTTTTGGAAACAG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCCGCTCCTTGAAACTTaGATACCGAGTCAACACTTC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSPLLET*IPSQHF
Trigger: GAAGTGTTGACTCGGTATCAAAGTTTCAAGGAGCGG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AGCACACACACACACACACACACACACACACACACACGAGGCCATCTTTATCTTTTATCGGTTAAGATATaGACTTTCTCCATGATCCAC +
Preference number: 5 (lower is better)
Translates to: STHTHTHTHTHTRGHLYLLSVKI*TFSMIH
Trigger: GTGGATCATGGAGAAAGTCAATATCTTAACCGATAA...AAGATAAAGATGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTGGTCTAGGATCTTCTaGCGTTTTTCCCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSWSRIF*RFSQAF
Trigger: GAAGGCTTGGGAAAAACGCAAGAAGATCCTAGACCA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTGCAGCTGCCAATTCTaGGACATTCAGGAAACGCTT +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSCSCQF*DIQETL
Trigger: AAGCGTTTCCTGAATGTCCAAGAATTGGCAGCTGCA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCCCCCTCTAGGCGTTaGTGCTTCTTCAGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSPSRR*CFFSKF
Trigger: GAACTTGCTGAAGAAGCACAAACGCCTAGAGGGGGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 90 bp TGGCTCTTTCAGAGCTTCAAATCGGCATACCAAGGACTCTTGCCTTaGCCTTATATCCTTAGAATCAGGATGGCCTATTTCTTCAAAATA +
Preference number: 5 (lower is better)
Translates to: WLFQSFKSAYQGLLP*PYILRIRMAYFFKI
Trigger: TATTTTGAAGAAATAGGCCATCCTGATTCTAAGGATATAAGGGCAAGGCAAGAGTCCTTGGTATGCCGATTTGAAGCTCTGAAAGAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAACTTCAGCTGTTCCAGTaGCTCCTTCATGGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIELQLFQ*LLHGLF
Trigger: GAAGAGGCCATGAAGGAGCAACTGGAACAGCTGAAG...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCTTCACTCACACCTTaGATGTCCTTGGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSSLTP*MSLAWI
Trigger: GATCCAGGCCAAGGACATCAAAGGTGTGAGTGAAGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATGGCTTCAAGATCATTTaGTCGCCTAGCAGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNGFKII*SPSSSS
Trigger: GCTCGAGCTGCTAGGCGACAAAATGATCTTGAAGCC...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCTCTGCTTCAAGGGATaGATGCTTCTGATATTTCCC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSLCFKG*MLLIFP
Trigger: GGGAAATATCAGAAGCATCAATCCCTTGAAGCAGAG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTGTAAGTTTGCAGCATaGGACAGAGCTTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSCKFAA*DRAFCL
Trigger: GAGACAGAAAGCTCTGTCCAATGCTGCAAACTTACA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCATAACTCCTTCACCTaGTCACTCATGACAGCAAGA +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSHNSFT*SLMTAR
Trigger: TCTTGCTGTCATGAGTGACAAGGTGAAGGAGTTATG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGGCATTCACGAGGTCTaGACCAGTCTCATCAGCAGA +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEGIHEV*TSLISR
Trigger: TCTGCTGATGAGACTGGTCAAGACCTCGTGAATGCC...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACATCCAACTGTCCACTaGCTCACTGTCTCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: INVICTQTQAHTHTHTHTHPTVH*LTVSVE
Trigger: TTCTACAGAGACAGTGAGCAAGTGGACAGTTGGATG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATTCCACCAGTCCTTATaGATGGAACTGAGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: INVICTQTQAHTHTHTHTFHQSL*MELSSV
Trigger: AACGCTGCTCAGTTCCATCAATAAGGACTGGTGGAA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCAAGAGGGAGCGGTATaGGTTCTCAATCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNQEGAV*VLNLLL
Trigger: CAGGAGCAGATTGAGAACCAATACCGCTCCCTCTTG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTAGATCATCAGCTACCTaGTTGATATCCCTTAGCCGA +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSRSSAT*LISLSR
Trigger: TCGGCTAAGGGATATCAACAAGGTAGCTGATGATCT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATCTCCTTACGATCCTTaGTACGCCCCTGCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIESPYDP*YAPAGL
Trigger: AAGACCTGCAGGGGCGTACAAAGGATCGTAAGGAGA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGCCTTGGCCAACTCTTaGAGCTTCTCCCAGTGTTCA +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYALANS*SFSQCS
Trigger: TGAACACTGGGAGAAGCTCAAAGAGTTGGCCAAGGC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTGTGTTGAACCTCTGTaGACGACTGGCCTCATTGAG +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYCVEPL*TTGLIE
Trigger: CTCAATGAGGCCAGTCGTCAACAGAGGTTCAACACA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATTGTGCACACACATTTaGTACTCGGGTCTCATGGAC +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQLCTHI*YSGLMD
Trigger: GTCCATGAGACCCGAGTACAAAATGTGTGTGCACAA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTCATTGGTCTTTAGGCTaGTTTCCTTATCAGCTATCC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSHWSLG*FPYQLS
Trigger: GGATAGCTGATAAGGAAACAAGCCTAAAGACCAATG...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCCAAGGTCTGCACCATaGCCATTGGTCTTTAGGCTT +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYPRSAP*PLVFRL
Trigger: AAGCCTAAAGACCAATGGCAATGGTGCAGACCTTGG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACACATCTCAAAGTTCTaGACCTGTCTTGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQHISKF*TCLASS
Trigger: GGAAGAGGCAAGACAGGTCAAGAACTTTGAGATGTG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACCTTTCTGTTATCTCTaGAATGCGTGGTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: INVICTQTQAHTHTHTHTPFCYL*NAWFMA
Trigger: AGCCATGAACCACGCATTCAAGAGATAACAGAAAGG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTGCTGGAACTGGACATaGGCTTCAAGATCATTTTGT +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSCWNWT*ASRSFC
Trigger: ACAAAATGATCTTGAAGCCAATGTCCAGTTCCAGCA...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGTCGCTATAGCCTCCTaGTCTCCAATCCACTCTAAG +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYVAIAS*SPIHSK
Trigger: CTTAGAGTGGATTGGAGACAAGGAGGCTATAGCGAC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAATCCTCGGCACACTCATaGGCATATTGGTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSSAHS*AYWFTS
Trigger: TGAAGTGAACCAATATGCCAATGAGTGTGCCGAGGA...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTAGGGCAGTCCAGTTGTaGTCAAGTATTTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSRAVQL*SSISIF
Trigger: AAAGATGGAAATACTTGACAACAACTGGACTGCCCT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAAGCAGGGCAGTCCAGTaGTTGTCAAGTATTTCCATC +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQSRAVQ*LSSISI
Trigger: GATGGAAATACTTGACAACAACTGGACTGCCCTGCT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAATGTATTCAGGTCCTaGAGTGCATCCTCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIENVFRS*SASSRA
Trigger: GGCTCGAGAGGATGCACTCAAGGACCTGAATACATT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 90 bp TATAAAAGTCAGTTGTTGTCCAAGTGGGTGATGAGTAGGCTCAGGTaGATGGAGAGCACTGTCTTTTATTTCATGATGGATTTCAGTATA +
Preference number: 5 (lower is better)
Translates to: YKSQLLSKWVMSRLR*MESTVFYFMMDFSI
Trigger: TATACTGAAATCCATCATGAAATAAAAGACAGTGCTCTCCATCCACCTGAGCCTACTCATCACCCACTTGGACAACAACTGACTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492934.1
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATAGGAACTTCTCAAACTaGGGCTCATGTTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNRNFSN*GSCSSS
Trigger: GGAGGATGAACATGAGCCCAAGTTTGAGAAGTTCCT...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATGGTTTCCAGGATCCATaGAAGGAAGGTACTGGCATT +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYGFQDP*KEGTGI
Trigger: AATGCCAGTACCTTCCTTCAATGGATCCTGGAAACC...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACACCACAACGGTTTCCTTaGGAAATTGCTCCATTTTTC +
Preference number: 5 (lower is better)
Translates to: INVICTQTQAHTHTHTHTPQRFP*EIAPFF
Trigger: GAAAAATGGAGCAATTTCCAAAGGAAACCGTTGTGG...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACATTCTGCCTTTTTCTCTaGAATCCATTCCAGCATGTC +
Preference number: 5 (lower is better)
Translates to: INVICTQTQAHTHTHTHTFCLFL*NPFQHV
Trigger: GACATGCTGGAATGGATTCAAGAGAAAAAGGCAGAA...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACTTAGCCGAGGCTCATaGGTATTCAAATCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQLSRGS*VFKSFW
Trigger: CCAAAAGGATTTGAATACCAATGAGCCTCGGCTAAG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTCAATCAGTTGTGCTTaGAGAGCCTTCCACCTGTCT +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNSISCA*RAFHLS
Trigger: AGACAGGTGGAAGGCTCTCAAAGCACAACTGATTGA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACATAGTCTCCAAGCTTaGTCCGCTCATCAATCAGTT +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQHSLQA*SAHQSV
Trigger: AACTGATTGATGAGCGGACAAAGCTTGGAGACTATG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCTTTATCTTCCACATTaGCCTGTACTCTTTGCCCCC +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNLYLPH*PVLFAP
Trigger: GGGGGCAAAGAGTACAGGCAAATGTGGAAGATAAAG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATCCAATGGTGCTGTATTaGATATCAAGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYPMVLY*ISRIRA
Trigger: CGCTCTGATCCTTGATATCAAATACAGCACCATTGG...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAACCTTCCTCTACCATTTaGTTTCCCCTTTCTGTTATC +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQPSSTI*FPLSVI
Trigger: GATAACAGAAAGGGGAAACAAAATGGTAGAGGAAGG...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACCATGGCCCTTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTAATTTGGTTGCAGTCTaGTCTACAGTTATGATCTTC +
Preference number: 5 (lower is better)
Translates to: TMALLYSKISCPLLYEYSNLVAV*STVMIF
Trigger: GAAGATCATAACTGTAGACAAGACTGCAACCAAATT...ACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAAGGGCCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp AAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAGCTCAAAAAGACTTGCTGCTTTaGAACCCTGCTCTTCAAGTT +
Preference number: 5 (lower is better)
Translates to: KLAAHSYMSTVPRNIEAQKDLLL*NPALQV
Trigger: AACTTGAAGAGCAGGGTTCAAAAGCAGCAAGTCTTT...TTGAGCTTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCTCCTTTTCAAAGACTaGCTGCTTTTGAACCCTGCT +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNLLFKD*LLLNPA
Trigger: AGCAGGGTTCAAAAGCAGCAAGTCTTTGAAAAGGAG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTGCATTATTTTCAAATaGCAGCTGCTGGTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNCIIFK*QLLVGL
Trigger: GAGGCCAACCAGCAGCTGCAATTTGAAAATAATGCA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATCTGTCTAAGGAACTTTaGTCATCTGACCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNLSKEL*SSDLRE
Trigger: TTCCCTGAGGTCAGATGACAAAAGTTCCTTAGACAG...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ATAAATGTAATATGCACACAAACACAAGCACACACACACACACACACACACACAATAAAAATAGAAACTTaGACACCCCTCAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: INVICTQTQAHTHTHTHTIKIET*TPLSSD
Trigger: GTCACTGCTGAGGGGTGTCAAAGTTTCTATTTTTAT...TGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTTTGTGTGCATATTACATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAATTGAGCTTCTTCCCTTaGTCATTTGTTCTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIELSFFP*SFVLSS
Trigger: GCTTGAGAGAACAAATGACAAAGGGAAGAAGCTCAA...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAGAGTTCCTGTTTCTTaGAGCAATGATCCATCCAGA +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIERVPVS*SNDPSR
Trigger: TCTGGATGGATCATTGCTCAAAGAAACAGGAACTCT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGCTACCAGCTCCACTaGGAAGTCTTCAAATTTCTT +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSYQLH*EVFKFL
Trigger: AAGAAATTTGAAGACTTCCAAGTGGAGCTGGTAGCT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAACCCTCAATCATCTCTaGGCCAGTTTTCTGTATGTT +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIETLNHL*ASFLYV
Trigger: AACATACAGAAAACTGGCCAAGAGATGATTGAGGGT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAAAAGCATTCTTTTCATaGATCCAAGCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEKAFFS*IQASSS
Trigger: GGAAGAGGAAGCTTGGATCAATGAAAAGAATGCTTT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATATAATCGTCTTCCAATaGCAACTTCCAAGCAGCTAT +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYIIVFQ*QLPSSY
Trigger: ATAGCTGCTTGGAAGTTGCAATTGGAAGACGATTAT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp ACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATAGAAATCTTTTCACACCAGTaGTTCAAAGCTGAAGCCTTA +
Preference number: 5 (lower is better)
Translates to: TVKLAAHSYMSTVPRNIEIFSHQ*FKAEAL
Trigger: TAAGGCTTCAGCTTTGAACAACTGGTGTGAAAAGAT...TTCTATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATACACTCATTGGCATATaGGTTCACTTCAACAACTCT +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYTLIGI*VHFNNS
Trigger: AGAGTTGTTGAAGTGAACCAATATGCCAATGAGTGT...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp TTCTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATTCAGTCACATCCCTTTaGAATCGTTGTAAGTTTGCA +
Preference number: 5 (lower is better)
Translates to: FFTVKLAAHSYMSTVPRNSVTSL*NRCKFA
Trigger: TGCAAACTTACAACGATTCAAAAGGGATGTGACTGA...ATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS-3UTR CAA 90 bp CTTTACAGTAAAATTAGCTGCCCACTCTTATATGAGTACAGTTCCCAGAAATATTCATCACCAATCAATTaGGTTGCAGTCTTGTCTACA +
Preference number: 5 (lower is better)
Translates to: LYSKISCPLLYEYSSQKYSSPIN*VAVLST
Trigger: TGTAGACAAGACTGCAACCAAATTGATTGGTGATGA...ATATTTCTGGGAACTGTACTCATATAAGAGTGGGCAGCTAATTTTACTGTAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp CTGCCCAGCAGCTGCCGCTGTTCATCTGCAAGCCTCTaGAAAGAACCCCAGCGGGAATTCAATTCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: LPSSCRCSSASL*KEPQREFNSCR
Trigger: CCGGCAGGAATTGAATTCCCGCTGGGGTTCTTTGCAGAGGCTTGCAGATGAACAGCGGCAGCTGCTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp CTGGGTGATGTTTCCTGGCTCTTCTCGTCGCCGCTGTaGGAGCATCGGGAACTCATCGTGGGCCAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: LGDVSWLFSSPL*EHRELIVGQSS
Trigger: AGAAGACTGGCCCACGATGAGTTCCCGATGCTCCCACAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp GTTCTCAATCTGCTCCTGGCGCTGGGTGATGTTTCCTaGCTCTTCTCGTCGCCGCTGTGGGAGCATCGGGAA +
Preference number: 6 (lower is better)
Translates to: VLNLLLALGDVS*LFSSPLWEHRE
Trigger: TTCCCGATGCTCCCACAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp AGCGGTATTGGTTCTCAATCTGCTCCTGGCGCTGGGTaGTGTTTCCTGGCTCTTCTCGTCGCCGCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: SGIGSQSAPGAG*CFLALLVAAVG
Trigger: TCCCACAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAACCAATACCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp CTCAGTGGCATCTGGATGGGACTCACTGAGCCGCTCTaGTGTCTCCCCCAGTATGGTCACCTTATCTCCCAG +
Preference number: 6 (lower is better)
Translates to: LSGIWMGLTEPL*CLPQYGHLISQ
Trigger: CTGGGAGATAAGGTGACCATACTGGGGGAGACAGCAGAGCGGCTCAGTGAGTCCCATCCAGATGCCACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp AGGGAGCGGTATTGGTTCTCAATCTGCTCCTGGCGCTaGGTGATGTTTCCTGGCTCTTCTCGTCGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: RERYWFSICSWR*VMFPGSSRRRC
Trigger: ACAGCGGCGACGAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAACCAATACCGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp TCTGCCATATCCAGCACATTCTGGATGGCAGGCTCATaGGCCACCAGCTCCCCCTCTAGGCGTTTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: SAISSTFWMAGS*ATSSPSRRLCF
Trigger: GAAGCACAAACGCCTAGAGGGGGAGCTGGTGGCCCATGAGCCTGCCATCCAGAATGTGCTGGATATGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp AAGGTCCTAACACCTAACACCACCTGCATCCCTCCCTaGTCTGGCCACACGCCCTCAATACTTGGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: KVLTPNTTCIPP*SGHTPSILGLD
Trigger: ATCCAGGCCAAGTATTGAGGGCGTGTGGCCAGAGCAGGGAGGGATGCAGGTGGTGTTAGGTGTTAGGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492934.1
CDS GCA 72 bp GCCCGATCCAAGAGGGAGCGGTATTGGTTCTCAATCTaGTCCTGGCGCTGGGTGATGTTTCCTGGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: ARSKRERYWFSI*SWRWVMFPGSS
Trigger: AGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAACCAATACCGCTCCCTCTTGGATCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp TGTACATACTGCTGGAACTTCAGGGCCCGCAGCAACTaGTCACCCTTCTCCAGGGTCAGCTCTAACAGCAGG +
Preference number: 6 (lower is better)
Translates to: CTYCWNFRARSN*SPFSRVSSNSR
Trigger: CCTGCTGTTAGAGCTGACCCTGGAGAAGGGTGACCAGTTGCTGCGGGCCCTGAAGTTCCAGCAGTATGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp TCCAAGAGGGAGCGGTATTGGTTCTCAATCTGCTCCTaGCGCTGGGTGATGTTTCCTGGCTCTTCTCGTCGC +
Preference number: 6 (lower is better)
Translates to: SKRERYWFSICS*RWVMFPGSSRR
Trigger: GCGACGAGAAGAGCCAGGAAACATCACCCAGCGCCAGGAGCAGATTGAGAACCAATACCGCTCCCTCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp CTGTCGATAAGTTCTGCACTGAAGTCCTCTAAGGCCTaGAAGGTGGGAGCCTCTGCCTCCATGTCAGCACGG +
Preference number: 6 (lower is better)
Translates to: LSISSALKSSKA*KVGASASMSAR
Trigger: CCGTGCTGACATGGAGGCAGAGGCTCCCACCTTCCAGGCCTTAGAGGACTTCAGTGCAGAACTTATCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp TCACAAGCGCTACACTCAATCAGGGAGTTCCCCAGGTaGATGACGCCATGCACCTGCTCAGATCGGCCATCG +
Preference number: 6 (lower is better)
Translates to: SQALHSIREFPR*MTPCTCSDRPS
Trigger: CGATGGCCGATCTGAGCAGGTGCATGGCGTCATCAACCTGGGGAACTCCCTGATTGAGTGTAGCGCTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS TCA 72 bp GTGGGAGCATCGGGAACTCATCGTGGGCCAGTCTTCTaGCATAGACAGCTGGGACAATGCCCTGATGATCAG +
Preference number: 6 (lower is better)
Translates to: VGASGTHRGPVF*HRQLGQCPDDQ
Trigger: CTGATCATCAGGGCATTGTCCCAGCTGTCTATGTCAGAAGACTGGCCCACGATGAGTTCCCGATGCTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp ATCAGGGAGTTCCCCAGGTTGATGACGCCATGCACCTaGTCAGATCGGCCATCGACTTCATGTGCAAAGGTC +
Preference number: 6 (lower is better)
Translates to: IREFPRLMTPCT*SDRPSTSCAKV
Trigger: GACCTTTGCACATGAAGTCGATGGCCGATCTGAGCAGGTGCATGGCGTCATCAACCTGGGGAACTCCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS GCA 72 bp CACTCAATCAGGGAGTTCCCCAGGTTGATGACGCCATaGACCTGCTCAGATCGGCCATCGACTTCATGTGCA +
Preference number: 6 (lower is better)
Translates to: HSIREFPRLMTP*TCSDRPSTSCA
Trigger: TGCACATGAAGTCGATGGCCGATCTGAGCAGGTGCATGGCGTCATCAACCTGGGGAACTCCCTGATTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS GCA 72 bp CTGCTTCTCTGTGAAACACTTCAACAGCATGGGCACTaGCCAGCAGCTGCCGCTGTTCATCTGCAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: LLLCETLQQHGH*PAAAAVHLQAS
Trigger: AGAGGCTTGCAGATGAACAGCGGCAGCTGCTGGGCAGTGCCCATGCTGTTGAAGTGTTTCACAGAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp TTCTCCAGGGTCAGCTCTAACAGCAGGTCCCACAGGTaGCGTAGCTCCTCTATATGGGCCTTCGTTTCTTCG +
Preference number: 6 (lower is better)
Translates to: FSRVSSNSRSHR*RSSSIWAFVSS
Trigger: CGAAGAAACGAAGGCCCATATAGAGGAGCTACGCCACCTGTGGGACCTGCTGTTAGAGCTGACCCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp CTTCTGACCCCTCTCAGCGACCCGCTCCTTGAAACTTaGATACCGAGTCAACACTTCCTGACGCCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: LLTPLSDPLLET*IPSQHFLTPLL
Trigger: CAGGAGAGGCGTCAGGAAGTGTTGACTCGGTATCAAAGTTTCAAGGAGCGGGTCGCTGAGAGGGGTCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp AGGGAGGCCAAGAAGTCCTCATGGTCTTTCTGCAGCTaGCGAATTTCATTCAGGGAGACACAGTGCACAGGC +
Preference number: 6 (lower is better)
Translates to: REAKKSSWSFCS*RISFRETQCTG
Trigger: GCCTGTGCACTGTGTCTCCCTGAATGAAATTCGGCAGCTGCAGAAAGACCATGAGGACTTCTTGGCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS GCA 72 bp CTAGCCAGGGAGGCCAAGAAGTCCTCATGGTCTTTCTaGAGCTGCCGAATTTCATTCAGGGAGACACAGTGC +
Preference number: 6 (lower is better)
Translates to: LAREAKKSSWSF*SCRISFRETQC
Trigger: GCACTGTGTCTCCCTGAATGAAATTCGGCAGCTGCAGAAAGACCATGAGGACTTCTTGGCCTCCCTGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS GCA 72 bp CTCTTGCCCCACAGCAGCCTTGTCTTTCAGCTTCTCTaGCATATCCAGCACATTCTGGATGGCAGGCTCATG +
Preference number: 6 (lower is better)
Translates to: LLPHSSLVFQLL*HIQHILDGRLM
Trigger: CATGAGCCTGCCATCCAGAATGTGCTGGATATGGCAGAGAAGCTGAAAGACAAGGCTGCTGTGGGGCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp ATCTGCTGGTGGCCAGGGCACGAATATGCTCCCAGCTaGAGACCAGATCTTCTTTCATCTCCTGGATCTGAG +
Preference number: 6 (lower is better)
Translates to: ICWWPGHEYAPS*RPDLLSSPGSE
Trigger: CTCAGATCCAGGAGATGAAAGAAGATCTGGTCTCCAGCTGGGAGCATATTCGTGCCCTGGCCACCAGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp ACTCCTCCCAGAGGCTGGCAACTTCACTCAGACGAGTaGTCACATTGTCAGAGGCATAGTGACCACCCTCAA +
Preference number: 6 (lower is better)
Translates to: TPPRGWQLHSDE*SHCQRHSDHPQ
Trigger: TTGAGGGTGGTCACTATGCCTCTGACAATGTGACCACTCGTCTGAGTGAAGTTGCCAGCCTCTGGGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp TCATTGCCATCACAAGCGCTACACTCAATCAGGGAGTTCCCCAGGTaGATGACGCCATGCACCTGCTCAGATCGGCCATCGACTTCATGT +
Preference number: 6 (lower is better)
Translates to: SLPSQALHSIREFPR*MTPCTCSDRPSTSC
Trigger: ACATGAAGTCGATGGCCGATCTGAGCAGGTGCATGGCGTCATCAACCTGGGGAACTCCCTGATTGAGTGTAGCGCTTGTGATGGCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS CAA 90 bp ATCCTCAAGCTTCTGACCCCTCTCAGCGACCCGCTCCTTGAAACTTaGATACCGAGTCAACACTTCCTGACGCCTCTCCTGGATCTCTTC +
Preference number: 6 (lower is better)
Translates to: ILKLLTPLSDPLLET*IPSQHFLTPLLDLF
Trigger: GAAGAGATCCAGGAGAGGCGTCAGGAAGTGTTGACTCGGTATCAAAGTTTCAAGGAGCGGGTCGCTGAGAGGGGTCAGAAGCTTGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp GACTGGCATCCAGAGTGTCCTGTTTTGCCAGAAGAGTaGGGAAGTCACCAAGGTCTGCACCATTGCCATTGG +
Preference number: 6 (lower is better)
Translates to: DWHPECPVLPEE*GSHQGLHHCHW
Trigger: CCAATGGCAATGGTGCAGACCTTGGTGACTTCCTCACTCTTCTGGCAAAACAGGACACTCTGGATGCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS TCA 72 bp TGCTGGTCTAGCTCCAGCAAACATTTAAAGTCTGCTTaGGCCCTAGCCAGGGAGGCCAAGAAGTCCTCATGG +
Preference number: 6 (lower is better)
Translates to: CWSSSSKHLKSA*ALAREAKKSSW
Trigger: CCATGAGGACTTCTTGGCCTCCCTGGCTAGGGCTCAAGCAGACTTTAAATGTTTGCTGGAGCTAGACCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS TCA 72 bp TTCATGCTTCTGAAGAAGGGCTTCTGCACTGCCCAGTaGGTTTCCCAGATCCTCGTTTTCCAGGAAGGCCTC +
Preference number: 6 (lower is better)
Translates to: FMLLKKGFCTAQ*VSQILVFQEGL
Trigger: GAGGCCTTCCTGGAAAACGAGGATCTGGGAAACTCACTGGGCAGTGCAGAAGCCCTTCTTCAGAAGCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp AGGGAATTCTCACGTGCCACCATCCAGCTCTCAACTTaGTCACAGTTCCCCTGGAACATCTGCAACTCCAGG +
Preference number: 6 (lower is better)
Translates to: REFSRATIQLST*SQFPWNICNSR
Trigger: CCTGGAGTTGCAGATGTTCCAGGGGAACTGTGATCAAGTTGAGAGCTGGATGGTGGCACGTGAGAATTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp TTGTCCTTCAGGTCAGTGATCTCGGGAAGTCTCTCTTaGTGGAAACTCTGCAGACTGGCATCCAGAGTGTCC +
Preference number: 6 (lower is better)
Translates to: LSFRSVISGSLS*WKLCRLASRVS
Trigger: GGACACTCTGGATGCCAGTCTGCAGAGTTTCCAGCAAGAGAGACTTCCCGAGATCACTGACCTGAAGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS GCA 72 bp GAGAGATGGCTTCGACCCCGTGGGTCCATATATTGCTaGATATGTGTGGCACAGAATGACACTTGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ERWLRPRGSIYC*ICVAQNDTCSG
Trigger: CCCAGAGCAAGTGTCATTCTGTGCCACACATATGCAGCAATATATGGACCCACGGGGTCGAAGCCATCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485680.1
ENST00000643759.2
CDS GCA 72 bp AGCTCCTGCTCCCGTTCCTCAATGATGTCAGATAGGTaGTTCCAGGTCCTTTCCAGCACCTCCACTGTTAAC +
Preference number: 6 (lower is better)
Translates to: SSCSRSSMMSDR*FQVLSSTSTVN
Trigger: GTTAACAGTGGAGGTGCTGGAAAGGACCTGGAAGCACCTATCTGACATCATTGAGGAACGGGAGCAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS CCA 72 bp GAGCGTCTTCCAAGTTGTCCCCCAGGTCCACAATCTTaGTTAGTTGACGCTTCATCGCCTGGATCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: ERLPSCPPGPQS*LVDASSPGSPS
Trigger: AGAAGGAGATCCAGGCGATGAAGCGTCAACTAACCAAGATTGTGGACCTGGGGGACAACTTGGAAGACGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000492934.1
ENST00000498708.1
ENST00000643759.2
CDS CCA 72 bp CGCCTAGCAGCTCGAGCACGGAGAGACTCCATATTCTaGTTCAAACTCTTGACCCTAGAGGCCACATCTTCT +
Preference number: 6 (lower is better)
Translates to: RLAARARRDSIF*FKLLTLEATSS
Trigger: AGAAGATGTGGCCTCTAGGGTCAAGAGTTTGAACCAGAATATGGAGTCTCTCCGTGCTCGAGCTGCTAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643759.2
ENST00000647256.1
CDS CCA 72 bp GAACTCATCGTGGGCCAGTCTTCTGACATAGACAGCTaGGACAATGCCCTGATGATCAGCAGCTTCCACCTT +
Preference number: 6 (lower is better)
Translates to: ELIVGQSSDIDS*DNALMISSFHL
Trigger: AAGGTGGAAGCTGCTGATCATCAGGGCATTGTCCCAGCTGTCTATGTCAGAAGACTGGCCCACGATGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp CAGGGAATTCTCACGTGCCACCATCCAGCTCTCAACTaGATCACAGTTCCCCTGGAACATCTGCAACTCCAG +
Preference number: 6 (lower is better)
Translates to: QGILTCHHPALN*ITVPLEHLQLQ
Trigger: CTGGAGTTGCAGATGTTCCAGGGGAACTGTGATCAAGTTGAGAGCTGGATGGTGGCACGTGAGAATTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp GTTTCTGCTTCATGCAGGTCAGCCAGGTACTGCTGGAACTGGACATaGGCTTCAAGATCATTTTGTCGCCTAGCAGCTCGAGCACGGAGA +
Preference number: 6 (lower is better)
Translates to: VSASCRSARYCWNWT*ASRSFCRLAARARR
Trigger: TCTCCGTGCTCGAGCTGCTAGGCGACAAAATGATCTTGAAGCCAATGTCCAGTTCCAGCAGTACCTGGCTGACCTGCATGAAGCAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643759.2
ENST00000647256.1
CDS TCA 72 bp GAGCCAACATCTCTCTCTCCAATAGCTGATGCTTCTTaGGTAGGTTTCCTGCTGAAGCCAAGTCCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: EPTSLSPIADAS*VGFLLKPSPWP
Trigger: AGGCCAGGGACTTGGCTTCAGCAGGAAACCTACTCAAGAAGCATCAGCTATTGGAGAGAGAGATGTTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS TCA 72 bp CATGTTCATCCTCCTCCACCATGGGCAAGTAGTAATTaGGTCCTCTCAGGCAGGACCGGAACTCTTTGTGAG +
Preference number: 6 (lower is better)
Translates to: HVHPPPPWASSN*VLSGRTGTLCE
Trigger: CTCACAAAGAGTTCCGGTCCTGCCTGAGAGGACTCAATTACTACTTGCCCATGGTGGAGGAGGATGAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481212.5
ENST00000498708.1
ENST00000643759.2
CDS TCA 72 bp CTCCTTGTCAATCAGGAAAGCAGTATAGTCCTCCAGTaGGACATAGCCCTTCCTCCCTGGATCCACAGCATC +
Preference number: 6 (lower is better)
Translates to: LLVNQESSIVLQ*DIALPPWIHSI
Trigger: GATGCTGTGGATCCAGGGAGGAAGGGCTATGTCTCACTGGAGGACTATACTGCTTTCCTGATTGACAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481212.5
ENST00000498708.1
ENST00000643759.2
CDS TCA 72 bp CTCCAAGCTTTGTCCGCTCATCAATCAGTTGTGCTTTaGGAGCCTTCCACCTGTCTAGTACACGTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: LQALSAHQSVVL*EPSTCLVHVGA
Trigger: GGCTCCAACGTGTACTAGACAGGTGGAAGGCTCTCAAAGCACAACTGATTGATGAGCGGACAAAGCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp TCAGCTGTTCCAGTTGCTCCTTCATGGCCTCTTCATTaGCATCACAAGCGCTACACTCAATCAGGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: SAVPVAPSWPLH*HHKRYTQSGSS
Trigger: GGAACTCCCTGATTGAGTGTAGCGCTTGTGATGGCAATGAAGAGGCCATGAAGGAGCAACTGGAACAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS GCA 72 bp CCAGAGAGATGGCTTCGACCCCGTGGGTCCATATATTaGTGCATATGTGTGGCACAGAATGACACTTGCTCT +
Preference number: 6 (lower is better)
Translates to: PERWLRPRGSIY*CICVAQNDTCS
Trigger: AGAGCAAGTGTCATTCTGTGCCACACATATGCAGCAATATATGGACCCACGGGGTCGAAGCCATCTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485680.1
ENST00000643759.2
CDS GCA 72 bp TCATTTAGGCTCTCCTTACGATCCTTTGTACGCCCCTaGAGGTCTTCCCAGGCCTCATTCAGCTCCATTTTC +
Preference number: 6 (lower is better)
Translates to: SFRLSLRSFVRP*RSSQASFSSIF
Trigger: GAAAATGGAGCTGAATGAGGCCTGGGAAGACCTGCAGGGGCGTACAAAGGATCGTAAGGAGAGCCTAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp CACGGTGCTCCTGATGTCTCTCCAGCAAGATCTCTATaGCAGTTAAGTCTTCGGCCAGCTCCTGTGATGATA +
Preference number: 6 (lower is better)
Translates to: HGAPDVSPARSL*QLSLRPAPVMI
Trigger: TATCATCACAGGAGCTGGCCGAAGACTTAACTGGCATAGAGATCTTGCTGGAGAGACATCAGGAGCACCGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp TCACAGTTCCCCTGGAACATCTGCAACTCCAGGCACTaGTCTAGGATCTTCTTGCGTTTTTCCCAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: SQFPWNICNSRH*SRIFLRFSQAF
Trigger: GAAGGCTTGGGAAAAACGCAAGAAGATCCTAGACCAGTGCCTGGAGTTGCAGATGTTCCAGGGGAACTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp TTTGTCCTTCAGGTCAGTGATCTCGGGAAGTCTCTCTaGCTGGAAACTCTGCAGACTGGCATCCAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: FVLQVSDLGKSL*LETLQTGIQSV
Trigger: GACACTCTGGATGCCAGTCTGCAGAGTTTCCAGCAAGAGAGACTTCCCGAGATCACTGACCTGAAGGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CAA 90 bp TCGTCCCGTTTCTTCATCAAAGCCTCCAGACTGTCTAAGGAACTTTaGTCATCTGACCTCAGGGAATTCTCACGTGCCACCATCCAGCTC +
Preference number: 6 (lower is better)
Translates to: SSRFFIKASRLSKEL*SSDLREFSRATIQL
Trigger: GAGCTGGATGGTGGCACGTGAGAATTCCCTGAGGTCAGATGACAAAAGTTCCTTAGACAGTCTGGAGGCTTTGATGAAGAAACGGGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp TGGGTCCATATATTGCTGCATATGTGTGGCACAGAATaGCACTTGCTCTGGGGTAAGGGCCAGTGGTTACAC +
Preference number: 6 (lower is better)
Translates to: WVHILLHMCGTE*HLLWGKGQWLH
Trigger: GTGTAACCACTGGCCCTTACCCCAGAGCAAGTGTCATTCTGTGCCACACATATGCAGCAATATATGGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485680.1
CDS TCA 72 bp CGCTCCCAGGCAGCATTCACCTCATTTTGCTTAGACTaGATTAAGGGTAGGTCAGGATGGTTTTCCTCGGCA +
Preference number: 6 (lower is better)
Translates to: RSQAAFTSFCLD*IKGRSGWFSSA
Trigger: TGCCGAGGAAAACCATCCTGACCTACCCTTAATTCAGTCTAAGCAAAATGAGGTGAATGCTGCCTGGGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp GCATCCTCTCGAGCCAACATCTCTCTCTCCAATAGCTaGTGCTTCTTGAGTAGGTTTCCTGCTGAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: ASSRANISLSNS*CFLSRFPAEAK
Trigger: CTTGGCTTCAGCAGGAAACCTACTCAAGAAGCATCAGCTATTGGAGAGAGAGATGTTGGCTCGAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp TGGGTCCATATATTGCTGCATATGTGTGGCACAGAATaGCACTTGCTCTGGGGTAAGGGCCTGCTTCATGTC +
Preference number: 6 (lower is better)
Translates to: WVHILLHMCGTE*HLLWGKGLLHV
Trigger: GACATGAAGCAGGCCCTTACCCCAGAGCAAGTGTCATTCTGTGCCACACATATGCAGCAATATATGGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp GCTACCAGCTCCACTTGGAAGTCTTCAAATTTCTTATaGAGAACTTCGGTGCGCTCCCAGTCTTCACCTAGC +
Preference number: 6 (lower is better)
Translates to: ATSSTWKSSNFL*RTSVRSQSSPS
Trigger: GCTAGGTGAAGACTGGGAGCGCACCGAAGTTCTGCATAAGAAATTTGAAGACTTCCAAGTGGAGCTGGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp AGTTTTTCATATCTGCTGGTGGCCAGGGCACGAATATaGTCCCAGCTGGAGACCAGATCTTCTTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: SFSYLLVARARI*SQLETRSSFIS
Trigger: GGAGATGAAAGAAGATCTGGTCTCCAGCTGGGAGCATATTCGTGCCCTGGCCACCAGCAGATATGAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp GCCATGCACCTGCTCAGATCGGCCATCGACTTCATGTaGAAAGGTCTGGTGTTTCAGGTATTTCCTCTGAAT +
Preference number: 6 (lower is better)
Translates to: AMHLLRSAIDFM*KGLVFQVFPLN
Trigger: ATTCAGAGGAAATACCTGAAACACCAGACCTTTGCACATGAAGTCGATGGCCGATCTGAGCAGGTGCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp AACGTAGTCATAGCCAGAGAGATGGCTTCGACCCCGTaGGTCCATATATTGCTGCATATGTGTGGCACAGAA +
Preference number: 6 (lower is better)
Translates to: NVVIAREMASTP*VHILLHMCGTE
Trigger: TTCTGTGCCACACATATGCAGCAATATATGGACCCACGGGGTCGAAGCCATCTCTCTGGCTATGACTACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485680.1
ENST00000643759.2
CDS CCA 72 bp TCCTCATCCTCTGTGTCTCTACAAATCAGCTGCAGATaGAGAAGGTCTAAGAGCTTCTTCTTTCGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SSSSVSLQISCR*RRSKSFFFRVA
Trigger: GGCCACCCGAAAGAAGAAGCTCTTAGACCTTCTCCATCTGCAGCTGATTTGTAGAGACACAGAGGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp TTCAGCTGTTCCAGTTGCTCCTTCATGGCCTCTTCATaGCCATCACAAGCGCTACACTCAATCAGGGAGTTC +
Preference number: 6 (lower is better)
Translates to: FSCSSCSFMASS*PSQALHSIREF
Trigger: GAACTCCCTGATTGAGTGTAGCGCTTGTGATGGCAATGAAGAGGCCATGAAGGAGCAACTGGAACAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465741.1
ENST00000643759.2
CDS CAA 72 bp CGAGCACGGAGAGACTCCATATTCTGGTTCAAACTCTaGACCCTAGAGGCCACATCTTCTGCAGCAAAGTGT +
Preference number: 6 (lower is better)
Translates to: RARRDSIFWFKL*TLEATSSAAKC
Trigger: ACACTTTGCTGCAGAAGATGTGGCCTCTAGGGTCAAGAGTTTGAACCAGAATATGGAGTCTCTCCGTGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643759.2
ENST00000647256.1
CDS CAA 72 bp TCTCCAAGCTTTGTCCGCTCATCAATCAGTTGTGCTTaGAGAGCCTTCCACCTGTCTAGTACACGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: SPSFVRSSISCA*RAFHLSSTRWS
Trigger: GCTCCAACGTGTACTAGACAGGTGGAAGGCTCTCAAAGCACAACTGATTGATGAGCGGACAAAGCTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp AGAAATCAGTTTGTCCTTCAGGTCAGTGATCTCGGGAAGTCTCTCTaGCTGGAAACTCTGCAGACTGGCATCCAGAGTGTCCTGTTTTGC +
Preference number: 6 (lower is better)
Translates to: RNQFVLQVSDLGKSL*LETLQTGIQSVLFC
Trigger: GCAAAACAGGACACTCTGGATGCCAGTCTGCAGAGTTTCCAGCAAGAGAGACTTCCCGAGATCACTGACCTGAAGGACAAACTGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CAA 90 bp ATGGCTTCAGTCACATCCCTTTTGAATCGTTGTAAGTTTGCAGCATaGGACAGAGCTTTCTGTCTCTGGAGAGCCAAACCACGAAGGCGC +
Preference number: 6 (lower is better)
Translates to: MASVTSLLNRCKFAA*DRAFCLWRAKPRRR
Trigger: GCGCCTTCGTGGTTTGGCTCTCCAGAGACAGAAAGCTCTGTCCAATGCTGCAAACTTACAACGATTCAAAAGGGATGTGACTGAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp CTCGTTTTCCAGGAAGGCCTCTTGTCTACTCATCCAACTGTCCACTaGCTCACTGTCTCTGTAGAAGAGATGAAAGTCCAAGCACTGCTC +
Preference number: 6 (lower is better)
Translates to: LVFQEGLLSTHPTVH*LTVSVEEMKVQALL
Trigger: GAGCAGTGCTTGGACTTTCATCTCTTCTACAGAGACAGTGAGCAAGTGGACAGTTGGATGAGTAGACAAGAGGCCTTCCTGGAAAACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp CAGCGCTGCAAATCTTCTGCATTATTTTCAAATTGCAGCTGCTGGTaGGCCTCATGCAACTGGGTCCCTTTCTGTTTTGTAGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: QRCKSSALFSNCSCW*ASCNWVPFCFVASS
Trigger: GCTGGAGGCTACAAAACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGCAGAAGATTTGCAGCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp TTCCCCTGGAACATCTGCAACTCCAGGCACTGGTCTAGGATCTTCTaGCGTTTTTCCCAAGCCTTCTCCAAATCATCTCTCTCTAGCTTG +
Preference number: 6 (lower is better)
Translates to: FPWNICNSRHWSRIF*RFSQAFSKSSLSSL
Trigger: CAAGCTAGAGAGAGATGATTTGGAGAAGGCTTGGGAAAAACGCAAGAAGATCCTAGACCAGTGCCTGGAGTTGCAGATGTTCCAGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp CTTACCTCTCGAGCCAACATCTCTCTCTCCAATAGCTaGTGCTTCTTGAGTAGGTTTCCTGCTGAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: LTSRANISLSNS*CFLSRFPAEAK
Trigger: CTTGGCTTCAGCAGGAAACCTACTCAAGAAGCATCAGCTATTGGAGAGAGAGATGTTGGCTCGAGAGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465741.1
CDS TCA 72 bp TCCAAGTTGTCCCCCAGGTCCACAATCTTGGTTAGTTaGCGCTTCATCGCCTGGATCTCCTTCTGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: SKLSPRSTILVS*RFIAWISFCFL
Trigger: AAGAAAACAGAAGGAGATCCAGGCGATGAAGCGTCAACTAACCAAGATTGTGGACCTGGGGGACAACTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000492934.1
ENST00000498708.1
ENST00000643759.2
CDS GCA 72 bp GCATTATTTTCAAATTGCAGCTGCTGGTTGGCCTCATaGAACTGGGTCCCTTTCTGTTTTGTAGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ALFSNCSCWLAS*NWVPFCFVASS
Trigger: GCTGGAGGCTACAAAACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp GAGGTGACTTGCCACTCAACATCCTCCAGCCAGCGCTaGAAATCTTCTGCATTATTTTCAAATTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: EVTCHSTSSSQR*KSSALFSNCSC
Trigger: GCAGCTGCAATTTGAAAATAATGCAGAAGATTTGCAGCGCTGGCTGGAGGATGTTGAGTGGCAAGTCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp TTTGCCAGAAGAGTGAGGAAGTCACCAAGGTCTGCACCATTGCCATaGGTCTTTAGGCTTGTTTCCTTATCAGCTATCCAAGCCTCTACC +
Preference number: 6 (lower is better)
Translates to: FARRVRKSPRSAPLP*VFRLVSLSAIQAST
Trigger: GGTAGAGGCTTGGATAGCTGATAAGGAAACAAGCCTAAAGACCAATGGCAATGGTGCAGACCTTGGTGACTTCCTCACTCTTCTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CAA 90 bp TCCTGTTTTGCCAGAAGAGTGAGGAAGTCACCAAGGTCTGCACCATaGCCATTGGTCTTTAGGCTTGTTTCCTTATCAGCTATCCAAGCC +
Preference number: 6 (lower is better)
Translates to: SCFARRVRKSPRSAP*PLVFRLVSLSAIQA
Trigger: GGCTTGGATAGCTGATAAGGAAACAAGCCTAAAGACCAATGGCAATGGTGCAGACCTTGGTGACTTCCTCACTCTTCTGGCAAAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CAA 90 bp AACATCCTCCAGCCAGCGCTGCAAATCTTCTGCATTATTTTCAAATaGCAGCTGCTGGTTGGCCTCATGCAACTGGGTCCCTTTCTGTTT +
Preference number: 6 (lower is better)
Translates to: NILQPALQIFCIIFK*QLLVGLMQLGPFLF
Trigger: AAACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGCAGAAGATTTGCAGCGCTGGCTGGAGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp GGCCAGTGGCTCTTTCAGAGCTTCAAATCGGCATACCAAGGACTCTaGCCTTGCCCTTATATCCTTAGAATCAGGATGGCCTATTTCTTC +
Preference number: 6 (lower is better)
Translates to: GQWLFQSFKSAYQGL*PCPYILRIRMAYFF
Trigger: GAAGAAATAGGCCATCCTGATTCTAAGGATATAAGGGCAAGGCAAGAGTCCTTGGTATGCCGATTTGAAGCTCTGAAAGAGCCACTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp TTCCCGAACTTCATCAGAGGCTTCATGATTGGCATTCACGAGGTCTaGACCAGTCTCATCAGCAGATTGAAATCGGTCATCGTAAGAGTC +
Preference number: 6 (lower is better)
Translates to: FPNFIRGFMIGIHEV*TSLISRLKSVIVRV
Trigger: GACTCTTACGATGACCGATTTCAATCTGCTGATGAGACTGGTCAAGACCTCGTGAATGCCAATCATGAAGCCTCTGATGAAGTTCGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp TGTGTTGAGCAGAAATCAGTTTGTCCTTCAGGTCAGTaGTCTCGGGAAGTCTCTCTTGCTGGAAACTCTGCA +
Preference number: 6 (lower is better)
Translates to: CVEQKSVCPSGQ*SREVSLAGNSA
Trigger: TGCAGAGTTTCCAGCAAGAGAGACTTCCCGAGATCACTGACCTGAAGGACAAACTGATTTCTGCTCAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS TCA 72 bp GTGGTTACACTGCCAGAAAGTGGTAGAGCTGGGACTTaGACCTATGATCCTCTTATGCCAAAGAGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: VVTLPESGRAGT*TYDPLMPKSSS
Trigger: AGAGGAACTCTTTGGCATAAGAGGATCATAGGTTCAAGTCCCAGCTCTACCACTTTCTGGCAGTGTAACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485680.1
CDS TCA 72 bp CAGATCTTCTTTCATCTCCTGGATCTGAGGTGCATCTaGAGGATGGGAAAGTGTCAGCTTCTCTGCTTTAGC +
Preference number: 6 (lower is better)
Translates to: QIFFHLLDLRCI*RMGKCQLLCFS
Trigger: GCTAAAGCAGAGAAGCTGACACTTTCCCATCCTTCAGATGCACCTCAGATCCAGGAGATGAAAGAAGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp CGCTGCAAATCTTCTGCATTATTTTCAAATTGCAGCTaGTGGTTGGCCTCATGCAACTGGGTCCCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: RCKSSALFSNCS*WLASCNWVPFC
Trigger: ACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGCAGAAGATTTGCAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp ACATCTGCAACTCCAGGCACTGGTCTAGGATCTTCTTaGGTTTTTCCCAAGCCTTCTCCAAATCATCTCTCT +
Preference number: 6 (lower is better)
Translates to: TSATPGTGLGSS*VFPKPSPNHLS
Trigger: AGAGAGATGATTTGGAGAAGGCTTGGGAAAAACGCAAGAAGATCCTAGACCAGTGCCTGGAGTTGCAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp GGCATAGGCCTCTTTCAATTTTTCGTGGTGTGCAGCTaGCAATTCTTGGACATTCAGGAAACGCTTGTTGAC +
Preference number: 6 (lower is better)
Translates to: GIGLFQFFVVCS*QFLDIQETLVD
Trigger: GTCAACAAGCGTTTCCTGAATGTCCAAGAATTGGCAGCTGCACACCACGAAAAATTGAAAGAGGCCTATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp AGGGTAGGTCAGGATGGTTTTCCTCGGCACACTCATTaGCATATTGGTTCACTTCAACAACTCTCCCTTCTT +
Preference number: 6 (lower is better)
Translates to: RVGQDGFPRHTH*HIGSLQQLSLL
Trigger: AAGAAGGGAGAGTTGTTGAAGTGAACCAATATGCCAATGAGTGTGCCGAGGAAAACCATCCTGACCTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp CCAGCTCCTCAAGGTCTCGGTAGAATTGTTTTAGGTTaGCATAGTCTCCAAGCTTTGTCCGCTCATCAATCA +
Preference number: 6 (lower is better)
Translates to: PAPQGLGRIVLG*HSLQALSAHQS
Trigger: TGATTGATGAGCGGACAAAGCTTGGAGACTATGCCAACCTAAAACAATTCTACCGAGACCTTGAGGAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp CAGGAAGGCCTCTTGTCTACTCATCCAACTGTCCACTaGCTCACTGTCTCTGTAGAAGAGATGAAAGTCCAA +
Preference number: 6 (lower is better)
Translates to: QEGLLSTHPTVH*LTVSVEEMKVQ
Trigger: TTGGACTTTCATCTCTTCTACAGAGACAGTGAGCAAGTGGACAGTTGGATGAGTAGACAAGAGGCCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp CTCTTTCAGAGCTTCAAATCGGCATACCAAGGACTCTaGCCTTGCCCTTATATCCTTAGAATCAGGATGGCC +
Preference number: 6 (lower is better)
Translates to: LFQSFKSAYQGL*PCPYILRIRMA
Trigger: GGCCATCCTGATTCTAAGGATATAAGGGCAAGGCAAGAGTCCTTGGTATGCCGATTTGAAGCTCTGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp AACATCTGCAACTCCAGGCACTGGTCTAGGATCTTCTaGCGTTTTTCCCAAGCCTTCTCCAAATCATCTCTC +
Preference number: 6 (lower is better)
Translates to: NICNSRHWSRIF*RFSQAFSKSSL
Trigger: GAGAGATGATTTGGAGAAGGCTTGGGAAAAACGCAAGAAGATCCTAGACCAGTGCCTGGAGTTGCAGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp TTCTTCATCAAAGCCTCCAGACTGTCTAAGGAACTTTaGTCATCTGACCTCAGGGAATTCTCACGTGCCACC +
Preference number: 6 (lower is better)
Translates to: FFIKASRLSKEL*SSDLREFSRAT
Trigger: GGTGGCACGTGAGAATTCCCTGAGGTCAGATGACAAAAGTTCCTTAGACAGTCTGGAGGCTTTGATGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp ATCAGCCTTCCAGTTGAATTCCTGAAAGGCATAATCGTCTTCCAATaGCAACTTCCAAGCAGCTATTGCCTTAGCCAGAGAAGGGGTCTT +
Preference number: 6 (lower is better)
Translates to: ISLPVEFLKGIIVFQ*QLPSSYCLSQRRGL
Trigger: AAGACCCCTTCTCTGGCTAAGGCAATAGCTGCTTGGAAGTTGCAATTGGAAGACGATTATGCCTTTCAGGAATTCAACTGGAAGGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CAA 90 bp CAGTGCACAGGCTCTGACAAGTTTTCTTCCATCTTTTCACACCAGTaGTTCAAAGCTGAAGCCTTATGTGCAAATTCCACGAACAGGTCC +
Preference number: 6 (lower is better)
Translates to: QCTGSDKFSSIFSHQ*FKAEALCANSTNRS
Trigger: GGACCTGTTCGTGGAATTTGCACATAAGGCTTCAGCTTTGAACAACTGGTGTGAAAAGATGGAAGAAAACTTGTCAGAGCCTGTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS CAA 90 bp AGTGGTCACATTGTCAGAGGCATAGTGACCACCCTCAATCATCTCTaGGCCAGTTTTCTGTATGTTTTCCAGCTGGGTCTTATTAACTGC +
Preference number: 6 (lower is better)
Translates to: SGHIVRGIVTTLNHL*ASFLYVFQLGLINC
Trigger: GCAGTTAATAAGACCCAGCTGGAAAACATACAGAAAACTGGCCAAGAGATGATTGAGGGTGGTCACTATGCCTCTGACAATGTGACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp CAGCTATCCAAGCCTCTACCACATCAGCCTTCCAGTTaGATTCCTGAAAGGCATAATCGTCTTCCAATTGCA +
Preference number: 6 (lower is better)
Translates to: QLSKPLPHQPSS*IPERHNRLPIA
Trigger: TGCAATTGGAAGACGATTATGCCTTTCAGGAATTCAACTGGAAGGCTGATGTGGTAGAGGCTTGGATAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS TCA 72 bp GAACTAAAACCAATAGGGACTGTGTACTTTGATGGTTaGACATGTGAGTTAGCGGTACGAGCCCTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: ELKPIGTVYFDG*TCELAVRALVL
Trigger: CAGAACCAGGGCTCGTACCGCTAACTCACATGTTCAACCATCAAAGTACACAGTCCCTATTGGTTTTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484520.1
CDS GCA 72 bp CAGAGCTTCAAATCGGCATACCAAGGACTCTTGCCTTaGCCTTATATCCTTAGAATCAGGATGGCCTATTTC +
Preference number: 6 (lower is better)
Translates to: QSFKSAYQGLLP*PYILRIRMAYF
Trigger: GAAATAGGCCATCCTGATTCTAAGGATATAAGGGCAAGGCAAGAGTCCTTGGTATGCCGATTTGAAGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp TCTTTCAGAGCTTCAAATCGGCATACCAAGGACTCTTaGCTTGCCCTTATATCCTTAGAATCAGGATGGCCT +
Preference number: 6 (lower is better)
Translates to: SFRASNRHTKDS*LALISLESGWP
Trigger: AGGCCATCCTGATTCTAAGGATATAAGGGCAAGGCAAGAGTCCTTGGTATGCCGATTTGAAGCTCTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp GAACAAGGCATAGGCCTCTTTCAATTTTTCGTGGTGTaGAGCTGCCAATTCTTGGACATTCAGGAAACGCTT +
Preference number: 6 (lower is better)
Translates to: EQGIGLFQFFVV*SCQFLDIQETL
Trigger: AAGCGTTTCCTGAATGTCCAAGAATTGGCAGCTGCACACCACGAAAAATTGAAAGAGGCCTATGCCTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS GCA 72 bp ATATATTGCTGCATATGTGTGGCACAGAATGACACTTaGTCTGGGGTAAGGGCCTGCTTCATGTCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: IYCCICVAQNDT*SGVRACFMSSL
Trigger: CAAAGAAGACATGAAGCAGGCCCTTACCCCAGAGCAAGTGTCATTCTGTGCCACACATATGCAGCAATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp CAGTTGTTGTCCAAGTGGGTGATGAGTAGGCTCAGGTaGATGGAGAGCACTGTCTTTTATTTCATGATGGAT +
Preference number: 6 (lower is better)
Translates to: QLLSKWVMSRLR*MESTVFYFMMD
Trigger: ATCCATCATGAAATAAAAGACAGTGCTCTCCATCCACCTGAGCCTACTCATCACCCACTTGGACAACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492934.1
CDS CCA 72 bp CACACCTGGTTTCCAGGATCCATTGAAGGAAGGTACTaGCATTCTGTTCAAACTCCTGACACATCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: HTWFPGSIEGRY*HSVQTPDTSQS
Trigger: ACTTTGAGATGTGTCAGGAGTTTGAACAGAATGCCAGTACCTTCCTTCAATGGATCCTGGAAACCAGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484520.1
CDS CCA 72 bp TCAGGATGGTTTTCCTCGGCACACTCATTGGCATATTaGTTCACTTCAACAACTCTCCCTTCTTTAGCTACC +
Preference number: 6 (lower is better)
Translates to: SGWFSSAHSLAY*FTSTTLPSLAT
Trigger: GGTAGCTAAAGAAGGGAGAGTTGTTGAAGTGAACCAATATGCCAATGAGTGTGCCGAGGAAAACCATCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp AAGCCCTGGTTTCCAGGATCCATTGAAGGAAGGTACTaGCATTCTGTTCAAACTCCTGACACATCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: KPWFPGSIEGRY*HSVQTPDTSQS
Trigger: ACTTTGAGATGTGTCAGGAGTTTGAACAGAATGCCAGTACCTTCCTTCAATGGATCCTGGAAACCAGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp AGAGTGAGGAAGTCACCAAGGTCTGCACCATTGCCATaGGTCTTTAGGCTTGTTTCCTTATCAGCTATCCAA +
Preference number: 6 (lower is better)
Translates to: RVRKSPRSAPLP*VFRLVSLSAIQ
Trigger: TTGGATAGCTGATAAGGAAACAAGCCTAAAGACCAATGGCAATGGTGCAGACCTTGGTGACTTCCTCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CAA 72 bp GTCAGGATGGTTTTCCTCGGCACACTCATTGGCATATaGGTTCACTTCAACAACTCTCCCTTCTTTAGCTAC +
Preference number: 6 (lower is better)
Translates to: VRMVFLGTLIGI*VHFNNSPFFSY
Trigger: GTAGCTAAAGAAGGGAGAGTTGTTGAAGTGAACCAATATGCCAATGAGTGTGCCGAGGAAAACCATCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp GGCATTCACGAGGTCTTGACCAGTCTCATCAGCAGATaGAAATCGGTCATCGTAAGAGTCAATCTCATGCTT +
Preference number: 6 (lower is better)
Translates to: GIHEVLTSLISR*KSVIVRVNLML
Trigger: AAGCATGAGATTGACTCTTACGATGACCGATTTCAATCTGCTGATGAGACTGGTCAAGACCTCGTGAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp TTCATCAGAGGCTTCATGATTGGCATTCACGAGGTCTaGACCAGTCTCATCAGCAGATTGAAATCGGTCATC +
Preference number: 6 (lower is better)
Translates to: FIRGFMIGIHEV*TSLISRLKSVI
Trigger: GATGACCGATTTCAATCTGCTGATGAGACTGGTCAAGACCTCGTGAATGCCAATCATGAAGCCTCTGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp TTCATGATTGGCATTCACGAGGTCTTGACCAGTCTCATCAGCAGATaGAAATCGGTCATCGTAAGAGTCAATCTCATGCTTATGCTGCTG +
Preference number: 6 (lower is better)
Translates to: FMIGIHEVLTSLISR*KSVIVRVNLMLMLL
Trigger: CAGCAGCATAAGCATGAGATTGACTCTTACGATGACCGATTTCAATCTGCTGATGAGACTGGTCAAGACCTCGTGAATGCCAATCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp GGGCTTGGAAGGCATTCTCTATTTCATCACTGGACTTaGTGTTTTCTGACTCCTTGTCAATCAGGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: GLGRHSLFHHWT*CFLTPCQSGKQ
Trigger: CTGCTTTCCTGATTGACAAGGAGTCAGAAAACATCAAGTCCAGTGATGAAATAGAGAATGCCTTCCAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481212.5
ENST00000498708.1
ENST00000643759.2
CDS TCA 72 bp CCGAATTTCATTCAGGGAGACACAGTGCACAGGCTCTaGCAAGTTTTCTTCCATCTTTTCACACCAGTTGTT +
Preference number: 6 (lower is better)
Translates to: PNFIQGDTVHRL*QVFFHLFTPVV
Trigger: AACAACTGGTGTGAAAAGATGGAAGAAAACTTGTCAGAGCCTGTGCACTGTGTCTCCCTGAATGAAATTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS CCA 72 bp TCTTTGGTAATATATGACTTGCCCTCTGCCAGGGCTTaGAAGGCATTCTCTATTTCATCACTGGACTTGATG +
Preference number: 6 (lower is better)
Translates to: SLVIYDLPSARA*KAFSISSLDLM
Trigger: CATCAAGTCCAGTGATGAAATAGAGAATGCCTTCCAAGCCCTGGCAGAGGGCAAGTCATATATTACCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481212.5
ENST00000498708.1
ENST00000643759.2
CDS CCA 72 bp ATAGTCATTCCGTGGGGCAGTAAAGACCCAGAATATTaGTTCTCTGAAGCAACTCTTTTATCTGGTGCACCA +
Preference number: 6 (lower is better)
Translates to: IVIPWGSKDPEY*FSEATLLSGAP
Trigger: TGGTGCACCAGATAAAAGAGTTGCTTCAGAGAACCAATATTCTGGGTCTTTACTGCCCCACGGAATGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492934.1
CDS CAA 72 bp CCAGTTGAATTCCTGAAAGGCATAATCGTCTTCCAATaGCAACTTCCAAGCAGCTATTGCCTTAGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: PVEFLKGIIVFQ*QLPSSYCLSQR
Trigger: TCTCTGGCTAAGGCAATAGCTGCTTGGAAGTTGCAATTGGAAGACGATTATGCCTTTCAGGAATTCAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CAA 90 bp AATGTATCTCCACAATCTCCTCGGACAGCCAAAGCATTCTTTTCATaGATCCAAGCTTCCTCTTCCTCAGCATTCTGCATGAATTGCAAG +
Preference number: 6 (lower is better)
Translates to: NVSPQSPRTAKAFFS*IQASSSSAFCMNCK
Trigger: CTTGCAATTCATGCAGAATGCTGAGGAAGAGGAAGCTTGGATCAATGAAAAGAATGCTTTGGCTGTCCGAGGAGATTGTGGAGATACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461624.1
ENST00000643759.2
CDS CAA 90 bp CTGGCAATGTTCTCCAGGATGACTCTATGCCTATTCAGAAGCTTTTaGGAAGCAATCAGGTCCTTTCCTGCAGAGGAAAGGAATTTCAAA +
Preference number: 6 (lower is better)
Translates to: LAMFSRMTLCLFRSF*EAIRSFPAEERNFK
Trigger: TTTGAAATTCCTTTCCTCTGCAGGAAAGGACCTGATTGCTTCCAAAAAGCTTCTGAATAGGCATAGAGTCATCCTGGAGAACATTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647256.1
CDS TCA 72 bp GTTTTCTTCCATCTTTTCACACCAGTTGTTCAAAGCTaGAGCCTTATGTGCAAATTCCACGAACAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: VFFHLFTPVVQS*SLMCKFHEQVL
Trigger: GAGGACCTGTTCGTGGAATTTGCACATAAGGCTTCAGCTTTGAACAACTGGTGTGAAAAGATGGAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484520.1
ENST00000643759.2
CDS GCA 72 bp ATAAAAATTCATTATAACGTTGCAATAGACGACGTCTaGGTTCTTCTGCCCGATCCAAGAGGGAGCGGTATT +
Preference number: 6 (lower is better)
Translates to: IKIHYNVAIDDV*VLLPDPRGSGI
Trigger: AATACCGCTCCCTCTTGGATCGGGCAGAAGAACGCAGACGTCGTCTATTGCAACGTTATAATGAATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp ATCCTCTTGTTCCATCCACCTCTTCCACTGTTTGCCTaGCTTCCATCTCAAGTTAGTTATGCAACTAATCAA +
Preference number: 6 (lower is better)
Translates to: ILLFHPPLPLFA*LPSQVSYATNQ
Trigger: TTGATTAGTTGCATAACTAACTTGAGATGGAAGCCAGGCAAACAGTGGAAGAGGTGGATGGAACAAGAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461624.1
CDS CCA 72 bp TGCAAATCTTCTGCATTATTTTCAAATTGCAGCTGCTaGTTGGCCTCATGCAACTGGGTCCCTTTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: CKSSALFSNCSC*LASCNWVPFCF
Trigger: AAAACAGAAAGGGACCCAGTTGCATGAGGCCAACCAGCAGCTGCAATTTGAAAATAATGCAGAAGATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp GACTCTTGCCTTGCCCTTATATCCTTAGAATCAGGATaGCCTATTTCTTCAAAATATGCAGCCAGGTCTGTA +
Preference number: 6 (lower is better)
Translates to: DSCLALISLESG*PISSKYAARSV
Trigger: TACAGACCTGGCTGCATATTTTGAAGAAATAGGCCATCCTGATTCTAAGGATATAAGGGCAAGGCAAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp AGGGCTTGGAAGGCATTCTCTATTTCATCACTGGACTaGATGTTTTCTGACTCCTTGTCAATCAGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: RAWKAFSISSLD*MFSDSLSIRKA
Trigger: TGCTTTCCTGATTGACAAGGAGTCAGAAAACATCAAGTCCAGTGATGAAATAGAGAATGCCTTCCAAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481212.5
ENST00000498708.1
ENST00000643759.2
CDS CAA 72 bp GTTAGAAGTCCTTCAAATAGTAGATCATCAGCTACCTaGTTGATATCCCTTAGCCGAGGCTCATTGGTATTC +
Preference number: 6 (lower is better)
Translates to: VRSPSNSRSSAT*LISLSRGSLVF
Trigger: GAATACCAATGAGCCTCGGCTAAGGGATATCAACAAGGTAGCTGATGATCTACTATTTGAAGGACTTCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 90 bp GACACTACCATCTTTCCTGATAAAGCCTCTCAGCAGAAGAGAAGATaGAGGATAAAAATAATGCCTGTCTTTAAATATCTGCAGGGCCAC +
Preference number: 6 (lower is better)
Translates to: DTTIFPDKASQQKRR*RIKIMPVFKYLQGH
Trigger: GTGGCCCTGCAGATATTTAAAGACAGGCATTATTTTTATCCTCAATCTTCTCTTCTGCTGAGAGGCTTTATCAGGAAAGATGGTAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484520.1
CDS CAA 90 bp CCTTCTGGTGTTAGAAGTCCTTCAAATAGTAGATCATCAGCTACCTaGTTGATATCCCTTAGCCGAGGCTCATTGGTATTCAAATCCTTT +
Preference number: 6 (lower is better)
Translates to: PSGVRSPSNSRSSAT*LISLSRGSLVFKSF
Trigger: AAAGGATTTGAATACCAATGAGCCTCGGCTAAGGGATATCAACAAGGTAGCTGATGATCTACTATTTGAAGGACTTCTAACACCAGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CAA 72 bp CTCTTTCAATTTTTCGTGGTGTGCAGCTGCCAATTCTaGGACATTCAGGAAACGCTTGTTGACATTATCTTT +
Preference number: 6 (lower is better)
Translates to: LFQFFVVCSCQF*DIQETLVDIIF
Trigger: AAAGATAATGTCAACAAGCGTTTCCTGAATGTCCAAGAATTGGCAGCTGCACACCACGAAAAATTGAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS CCA 72 bp TCTTTCAATTTTTCGTGGTGTGCAGCTGCCAATTCTTaGACATTCAGGAAACGCTTGTTGACATTATCTTTT +
Preference number: 6 (lower is better)
Translates to: SFNFSWCAAANS*TFRKRLLTLSF
Trigger: AAAAGATAATGTCAACAAGCGTTTCCTGAATGTCCAAGAATTGGCAGCTGCACACCACGAAAAATTGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643759.2
CDS TCA 72 bp TTTCCTAAGAGATCACATAAGATGGTGAAAGAACTCTaGGAAATTGGGTATAAAAGTCAGTTGTTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: FPKRSHKMVKEL*EIGYKSQLLSK
Trigger: CTTGGACAACAACTGACTTTTATACCCAATTTCTCAGAGTTCTTTCACCATCTTATGTGATCTCTTAGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492934.1